BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4437
(131 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|270009219|gb|EFA05667.1| lim1 [Tribolium castaneum]
Length = 511
Score = 137 bits (345), Expect = 1e-30, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 82/134 (61%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
MLISCA C+KPILDKFLLNVLERTWHADCVRC+DCH L+DKCFSRE KLFCRNDFFR
Sbjct: 74 MLISCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFFRRY 133
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
GCG G+S S L+ A ++ +H +C C C LS +
Sbjct: 134 GTKCGGCGQGISPSDLVRKA--------------RDKVFHLNCFTCLVCRKQLSTGEELY 179
Query: 118 FSREGKLFCRNDFF 131
+ K C++D+
Sbjct: 180 VLDDNKFICKDDYL 193
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ MLISCA C+KPILDKFLLNVLERTWHADCVRC+DCH L+DKCFSRE KLFCRNDFF
Sbjct: 71 AAGMLISCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFF 130
>gi|189238568|ref|XP_969484.2| PREDICTED: similar to LIM homeobox 1b [Tribolium castaneum]
Length = 497
Score = 137 bits (344), Expect = 2e-30, Method: Composition-based stats.
Identities = 68/134 (50%), Positives = 82/134 (61%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
MLISCA C+KPILDKFLLNVLERTWHADCVRC+DCH L+DKCFSRE KLFCRNDFFR
Sbjct: 150 MLISCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFFRRY 209
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
GCG G+S S L+ A ++ +H +C C C LS +
Sbjct: 210 GTKCGGCGQGISPSDLVRKA--------------RDKVFHLNCFTCLVCRKQLSTGEELY 255
Query: 118 FSREGKLFCRNDFF 131
+ K C++D+
Sbjct: 256 VLDDNKFICKDDYL 269
Score = 120 bits (301), Expect = 2e-25, Method: Composition-based stats.
Identities = 50/60 (83%), Positives = 55/60 (91%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ MLISCA C+KPILDKFLLNVLERTWHADCVRC+DCH L+DKCFSRE KLFCRNDFF
Sbjct: 147 AAGMLISCAACDKPILDKFLLNVLERTWHADCVRCFDCHAPLTDKCFSRENKLFCRNDFF 206
>gi|328705917|ref|XP_001945631.2| PREDICTED: LIM/homeobox protein Lhx5-like [Acyrthosiphon pisum]
Length = 555
Score = 122 bits (306), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/133 (42%), Positives = 84/133 (63%), Gaps = 17/133 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+++SCAGC+KPI+DKFLLNVL+R WHA+CV+C DCH TLSDKC+SR+GK+ C+ DF+R
Sbjct: 113 LMMSCAGCDKPIMDKFLLNVLDRAWHAECVKCADCHGTLSDKCYSRDGKILCKPDFYRRY 172
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
+ +GC G+S + L+ A ++ +H +C C C LS ++ +
Sbjct: 173 GKKCNGCAQGISPTDLVRKA--------------RDKVFHLNCFTCMICRKQLSTGEELY 218
Query: 119 SRE-GKLFCRNDF 130
E K C++D+
Sbjct: 219 VLEDNKFICKDDY 231
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 43/64 (67%), Positives = 56/64 (87%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G G SS+++SCAGC+KPI+DKFLLNVL+R WHA+CV+C DCH TLSDKC+SR+GK+ C+
Sbjct: 106 GGGRCSSLMMSCAGCDKPIMDKFLLNVLDRAWHAECVKCADCHGTLSDKCYSRDGKILCK 165
Query: 128 NDFF 131
DF+
Sbjct: 166 PDFY 169
>gi|195456664|ref|XP_002075233.1| GK16904 [Drosophila willistoni]
gi|194171318|gb|EDW86219.1| GK16904 [Drosophila willistoni]
Length = 506
Score = 119 bits (297), Expect = 5e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|198469300|ref|XP_001354984.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
gi|198146805|gb|EAL32040.2| GA10943 [Drosophila pseudoobscura pseudoobscura]
Length = 528
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|195480019|ref|XP_002101106.1| GE17432 [Drosophila yakuba]
gi|194188630|gb|EDX02214.1| GE17432 [Drosophila yakuba]
Length = 500
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|194890894|ref|XP_001977402.1| GG19023 [Drosophila erecta]
gi|190649051|gb|EDV46329.1| GG19023 [Drosophila erecta]
Length = 504
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|18858205|ref|NP_572505.1| Lim1, isoform A [Drosophila melanogaster]
gi|39841014|gb|AAD55417.2|AF181631_1 GH04929p [Drosophila melanogaster]
gi|6252420|dbj|BAA86224.1| dLim1 [Drosophila melanogaster]
gi|22833027|gb|AAF46413.2| Lim1, isoform A [Drosophila melanogaster]
gi|220943666|gb|ACL84376.1| Lim1-PA [synthetic construct]
gi|220953602|gb|ACL89344.1| Lim1-PA [synthetic construct]
Length = 505
Score = 119 bits (297), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|194769270|ref|XP_001966729.1| GF19125 [Drosophila ananassae]
gi|190618250|gb|EDV33774.1| GF19125 [Drosophila ananassae]
Length = 500
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|195400977|ref|XP_002059092.1| GJ15180 [Drosophila virilis]
gi|194141744|gb|EDW58161.1| GJ15180 [Drosophila virilis]
Length = 498
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|195130757|ref|XP_002009817.1| GI15570 [Drosophila mojavensis]
gi|193908267|gb|EDW07134.1| GI15570 [Drosophila mojavensis]
Length = 503
Score = 118 bits (296), Expect = 6e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|195049216|ref|XP_001992673.1| GH24084 [Drosophila grimshawi]
gi|193893514|gb|EDV92380.1| GH24084 [Drosophila grimshawi]
Length = 501
Score = 118 bits (296), Expect = 7e-25, Method: Composition-based stats.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|345132131|gb|AEN75258.1| Lim1 [Neanthes arenaceodentata]
Length = 498
Score = 116 bits (290), Expect = 3e-24, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 75/134 (55%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WHA CV+C +C L+DKCFSR+GKL+CR DFFR
Sbjct: 23 MVMCAGCERPILDRFLLNVLDRAWHAKCVQCVECRSNLTDKCFSRDGKLYCREDFFR--- 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
RF + CG GC + I + + + +H C C C LS +
Sbjct: 80 RFGTKCG------------GCSQGISPNDLVRRARNKVFHLKCFTCMVCRKQLSTGEELY 127
Query: 118 FSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 128 VLDENKFICKEDYL 141
Score = 103 bits (256), Expect = 3e-20, Method: Composition-based stats.
Identities = 42/68 (61%), Positives = 52/68 (76%), Gaps = 1/68 (1%)
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGK 123
PS L M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C L+DKCFSR+GK
Sbjct: 12 PSPAATNLHKKMVM-CAGCERPILDRFLLNVLDRAWHAKCVQCVECRSNLTDKCFSRDGK 70
Query: 124 LFCRNDFF 131
L+CR DFF
Sbjct: 71 LYCREDFF 78
>gi|242011465|ref|XP_002426470.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
gi|212510582|gb|EEB13732.1| LIM/homeobox protein Lhx3, putative [Pediculus humanus corporis]
Length = 394
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 81/134 (60%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
ML++CAGC+KPILDKFLLNVL+RTWHA+CVRC+DC L+DKCFSREGKLFCRNDFFR
Sbjct: 29 MLLACAGCDKPILDKFLLNVLDRTWHAECVRCHDCRAALADKCFSREGKLFCRNDFFRRY 88
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
GC G+S S L+ A ++ +H +C C C LS +
Sbjct: 89 GTKCGGCLQGISPSDLVRKA--------------RDKVFHLNCFTCMVCRKQLSTGEELY 134
Query: 118 FSREGKLFCRNDFF 131
+ K C+ D+
Sbjct: 135 VLDDNKFICKEDYL 148
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 49/64 (76%), Positives = 57/64 (89%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ S ML++CAGC+KPILDKFLLNVL+RTWHA+CVRC+DC L+DKCFSREGKLFCR
Sbjct: 22 GLPGSGGMLLACAGCDKPILDKFLLNVLDRTWHAECVRCHDCRAALADKCFSREGKLFCR 81
Query: 128 NDFF 131
NDFF
Sbjct: 82 NDFF 85
>gi|405975209|gb|EKC39790.1| LIM/homeobox protein Lhx5 [Crassostrea gigas]
Length = 471
Score = 114 bits (285), Expect = 1e-23, Method: Composition-based stats.
Identities = 57/133 (42%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CA C++PILD+FLLNVL+R WHA CV+C DC TL+DKCFSR+GKLFCRNDFFR
Sbjct: 1 MVQCAACDRPILDRFLLNVLDRAWHAKCVQCSDCKTTLTDKCFSRDGKLFCRNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
RF + CAGC + I + + + +H C C C LS +
Sbjct: 58 RFGT------------KCAGCTQGISPNDLVRRARNKVFHLKCFTCIICRKQLSTGEELY 105
Query: 118 FSREGKLFCRNDF 130
E + C+ D+
Sbjct: 106 VMDENRFICKEDY 118
Score = 102 bits (253), Expect = 7e-20, Method: Composition-based stats.
Identities = 40/56 (71%), Positives = 49/56 (87%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CA C++PILD+FLLNVL+R WHA CV+C DC TL+DKCFSR+GKLFCRNDFF
Sbjct: 1 MVQCAACDRPILDRFLLNVLDRAWHAKCVQCSDCKTTLTDKCFSRDGKLFCRNDFF 56
>gi|167859076|gb|ACA04473.1| Lim1 [Strongylocentrotus purpuratus]
Length = 480
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKLFC+NDFFR
Sbjct: 1 MVQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DK 116
R+ + CAGC + IL L+ + +H +C C C LS +
Sbjct: 59 -RYGT------------KCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E + C+ D+
Sbjct: 106 YVVDENQFICKEDYL 120
>gi|10257388|dbj|BAB13725.1| transcription factor HpLim1 [Hemicentrotus pulcherrimus]
Length = 480
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKLFC+NDFFR
Sbjct: 1 MVQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DK 116
R+ + CAGC + IL L+ + +H +C C C LS +
Sbjct: 59 -RYGT------------KCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E + C+ D+
Sbjct: 106 YVVDENQFICKEDYL 120
>gi|47228451|emb|CAG05271.1| unnamed protein product [Tetraodon nigroviridis]
Length = 579
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 56/135 (41%), Positives = 78/135 (57%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C L++KCFSR+GKL+C+ DFFR
Sbjct: 160 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECSCNLTEKCFSRDGKLYCKMDFFR-- 217
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DK 116
RF + CAGC + I + + + +H +C C C+ LS +
Sbjct: 218 -RFGT------------KCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 264
Query: 117 CFSREGKLFCRNDFF 131
E K C+ DF
Sbjct: 265 YVIDENKFVCKEDFL 279
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 44/75 (58%), Positives = 56/75 (74%), Gaps = 1/75 (1%)
Query: 58 RSPVRF-PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
RS VR S GV M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C L++K
Sbjct: 142 RSAVRLGRSALGVLQVGDMMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECSCNLTEK 201
Query: 117 CFSREGKLFCRNDFF 131
CFSR+GKL+C+ DFF
Sbjct: 202 CFSRDGKLYCKMDFF 216
>gi|47551255|ref|NP_999810.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
gi|33286229|gb|AAQ01662.1| Lim homeodomain transcription factor 1 [Strongylocentrotus
purpuratus]
Length = 480
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 77/135 (57%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKLFC+NDFFR
Sbjct: 1 MVQVCAGCERPILDRFLLNVLDRPWHVKCVQCCECKAKLTEKCFSREGKLFCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DK 116
R+ + CAGC + IL L+ + +H +C C C LS +
Sbjct: 59 -RYGT------------KCAGCLQGILPSDLVRRARSKVFHLNCFTCMVCRKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E + C+ D+
Sbjct: 106 YVVDENQFICKEDYL 120
>gi|148225925|ref|NP_001084128.1| LIM/homeobox protein Lhx1 [Xenopus laevis]
gi|267419|sp|P29674.1|LHX1_XENLA RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Xlim1;
Short=x-Lhx1; Short=xLIM-1
gi|64830|emb|CAA45353.1| homeobox protein [Xenopus laevis]
gi|213623130|gb|AAI69338.1| Homeobox protein [Xenopus laevis]
gi|213623134|gb|AAI69340.1| Homeobox protein [Xenopus laevis]
Length = 403
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|154147696|ref|NP_001093698.1| LIM homeobox 1 [Xenopus (Silurana) tropicalis]
gi|138519843|gb|AAI35732.1| lhx1 protein [Xenopus (Silurana) tropicalis]
Length = 409
Score = 111 bits (278), Expect = 8e-23, Method: Composition-based stats.
Identities = 55/133 (41%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|291232097|ref|XP_002736028.1| PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]
Length = 498
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 75/135 (55%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGC++PILD+FLLNVL+R WH CV+C DC+ TLSDKC+SREGKL+CR DF R
Sbjct: 1 MVQLCAGCDRPILDRFLLNVLDRAWHVKCVQCSDCNCTLSDKCYSREGKLYCRTDFVR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DK 116
R+ + CAGC I + + + +H C C C LS +
Sbjct: 59 -RYGT------------KCAGCSHGIAPNDLVRRARNKVFHLKCFTCMVCSKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E + C++D+
Sbjct: 106 YVVDENQYICKDDYL 120
>gi|410903918|ref|XP_003965440.1| PREDICTED: LIM/homeobox protein Lhx5-like [Takifugu rubripes]
Length = 396
Score = 110 bits (275), Expect = 2e-22, Method: Composition-based stats.
Identities = 56/134 (41%), Positives = 78/134 (58%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C+ L++KCFSR+GKL+C+ DFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKMDFFRRF 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 GTKCAGCLQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
E K C+ DF
Sbjct: 107 VIDENKFVCKEDFL 120
>gi|45382269|ref|NP_990744.1| LIM/homeobox protein Lhx1 [Gallus gallus]
gi|1708826|sp|P53411.1|LHX1_CHICK RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|531183|gb|AAA62173.1| amino acid feature: homeodomain, bp 674 .. 853; amino acid feature:
LIM2, bp 326 .. 481; amino acid feature: LIM1, bp 149
..292 [Gallus gallus]
Length = 406
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|432885359|ref|XP_004074682.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oryzias latipes]
Length = 396
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 56/135 (41%), Positives = 79/135 (58%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C DC+ L++KCFSR+GKL+C+ DFFR
Sbjct: 1 MMVLCAGCERPILDRFLLNVLDRAWHAKCVQCCDCNCNLTEKCFSRDGKLYCKMDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DK 116
RF + CAGC + I + + + +H +C C C+ LS +
Sbjct: 59 -RFGT------------KCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 106 YVIDENKFVCKEDYL 120
>gi|88954018|gb|ABD59002.1| LIM-homeodomain protein AmphiLim1/5 [Branchiostoma floridae]
Length = 464
Score = 109 bits (273), Expect = 3e-22, Method: Composition-based stats.
Identities = 50/115 (43%), Positives = 70/115 (60%), Gaps = 16/115 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+++CAGCE+P+LD+FLLNVL+R WHA CVRC DC L++KCF+R+ KL+CR DFFR
Sbjct: 1 MVVNCAGCERPVLDRFLLNVLDRAWHAKCVRCSDCSCRLTEKCFTRDSKLYCREDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS 114
RF + CAGC + IL + + + +H C C C ++
Sbjct: 59 -RFGT------------KCAGCTQGILPNDLVRRARNKVFHLKCFTCAACAKQMA 100
Score = 98.6 bits (244), Expect = 8e-19, Method: Composition-based stats.
Identities = 37/57 (64%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M+++CAGCE+P+LD+FLLNVL+R WHA CVRC DC L++KCF+R+ KL+CR DFF
Sbjct: 1 MVVNCAGCERPVLDRFLLNVLDRAWHAKCVRCSDCSCRLTEKCFTRDSKLYCREDFF 57
>gi|348535371|ref|XP_003455174.1| PREDICTED: LIM/homeobox protein Lhx5-like [Oreochromis niloticus]
Length = 396
Score = 109 bits (272), Expect = 4e-22, Method: Composition-based stats.
Identities = 55/135 (40%), Positives = 80/135 (59%), Gaps = 19/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C+ L++KCFSR+GKL+C+ DFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS---DK 116
RF + CAGC + I + + + +H +C C C+ LS +
Sbjct: 59 -RFGT------------KCAGCLQGISPNDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 117 CFSREGKLFCRNDFF 131
E K C++D+
Sbjct: 106 YVIDENKFVCKDDYL 120
>gi|357631671|gb|EHJ79140.1| lim1 [Danaus plexippus]
Length = 162
Score = 108 bits (269), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 61/132 (46%), Positives = 76/132 (57%), Gaps = 17/132 (12%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVR 62
++CAGCEKPILDKFLL+VLER WHA CVRC DC L+DKC+SR+ KLFCRNDFFR
Sbjct: 1 MACAGCEKPILDKFLLHVLERAWHAACVRCADCRAPLADKCYSRDNKLFCRNDFFRRYGT 60
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFS 119
SGCG G+S S L+ E+ +H +C C C LS +
Sbjct: 61 KCSGCGHGISPSDLVR--------------KAREKVFHLNCFTCLVCRKQLSTGEELYVL 106
Query: 120 REGKLFCRNDFF 131
+ K C+ D+
Sbjct: 107 DDNKFICKEDYL 118
>gi|383853574|ref|XP_003702297.1| PREDICTED: LIM/homeobox protein Lhx5-like [Megachile rotundata]
Length = 485
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 59/134 (44%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
ML+SCAGCEKPI+D++LLNVL+R WH +CVRC+DC TL DKCFSRE KLFCR DFFR
Sbjct: 1 MLLSCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
SGC G+S L+ A ++ +H +C C C +S +
Sbjct: 61 GTKCSGCLQGISPQDLVRKA--------------RDKVFHLNCFTCLVCRKQMSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
+ K C+ D+
Sbjct: 107 VLDDNKFVCKQDYL 120
>gi|195163209|ref|XP_002022444.1| GL13034 [Drosophila persimilis]
gi|194104436|gb|EDW26479.1| GL13034 [Drosophila persimilis]
Length = 332
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 79/132 (59%), Gaps = 17/132 (12%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVR 62
I CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 22 IPCAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGT 81
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS- 119
SGCG G++ S L+ KP ++ +H +C C C LS ++ +
Sbjct: 82 KCSGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVL 127
Query: 120 REGKLFCRNDFF 131
+ K C++D+
Sbjct: 128 DDNKFICKDDYL 139
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 48/59 (81%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S+ I CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFF
Sbjct: 18 SAWAIPCAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFF 76
>gi|410976694|ref|XP_003994749.1| PREDICTED: LIM/homeobox protein Lhx5 [Felis catus]
Length = 332
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/137 (43%), Positives = 81/137 (59%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GCG G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCGQGISPSDLVRKA--------------RGKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|350396477|ref|XP_003484565.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus impatiens]
Length = 419
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++SCAGCEKPI+D++LLNVL+R WH +CVRC+DC TL DKCFSRE KLFCR DFFR
Sbjct: 1 MILSCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
SGC G+S L+ A ++ +H +C C C +S +
Sbjct: 61 GTKCSGCLQGISPQDLVRKA--------------RDKVFHLNCFTCLVCRKQMSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
+ K C+ D+
Sbjct: 107 VLDDNKFVCKQDYL 120
>gi|391342699|ref|XP_003745653.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 405
Score = 106 bits (265), Expect = 2e-21, Method: Composition-based stats.
Identities = 52/133 (39%), Positives = 77/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLL+VL+R+WHA CV+C DC +L +KCFSR+GKL+CR+DF++
Sbjct: 3 MVHCAGCERPILDRFLLHVLDRSWHAKCVQCTDCRCSLIEKCFSRDGKLYCRSDFYKRFG 62
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GCG G+S + L+ A + +H C C C LS +
Sbjct: 63 TKCAGCGQGISPTDLVRRA--------------RSKVFHLKCFTCLVCRKQLSTGEELYV 108
Query: 119 SREGKLFCRNDFF 131
E + C+ D+
Sbjct: 109 LDENRFICKEDYL 121
>gi|340710825|ref|XP_003393984.1| PREDICTED: LIM/homeobox protein Lhx5-like [Bombus terrestris]
Length = 479
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 58/134 (43%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++SCAGCEKPI+D++LLNVL+R WH +CVRC+DC TL DKCFSRE KLFCR DFFR
Sbjct: 1 MILSCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRTTLQDKCFSREAKLFCREDFFRRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
SGC G+S L+ A ++ +H +C C C +S +
Sbjct: 61 GTKCSGCLQGISPQDLVRKA--------------RDKVFHLNCFTCLVCRKQMSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
+ K C+ D+
Sbjct: 107 VLDDNKFVCKQDYL 120
>gi|20502369|dbj|BAB91364.1| LIM homeodomain protein [Branchiostoma belcheri]
Length = 402
Score = 105 bits (263), Expect = 5e-21, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFSR+G ++C++DFFR
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRRFGTKC 100
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+GCG G+ + ++ A ++ +H C C C L+ D+ + E
Sbjct: 101 AGCGQGIPPTQVVRRAQ--------------DKIYHLQCFACIMCKRQLATGDEFYLMED 146
Query: 122 GKLFCRNDF 130
KL C++D+
Sbjct: 147 AKLVCKSDY 155
Score = 91.3 bits (225), Expect = 1e-16, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS 119
P P + ++S + CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFS
Sbjct: 22 PASAPVLMDIRVNSPNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFS 81
Query: 120 REGKLFCRNDFF 131
R+G ++C++DFF
Sbjct: 82 RDGHVYCKDDFF 93
>gi|443701941|gb|ELU00131.1| hypothetical protein CAPTEDRAFT_168913 [Capitella teleta]
Length = 481
Score = 105 bits (262), Expect = 5e-21, Method: Composition-based stats.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M + CAGC++PI+++FLL VL+R WHA CV C DC L+DKCFSR+G+L+CR DF+R
Sbjct: 2 MAVLCAGCDRPIIERFLLTVLDRAWHAQCVLCVDCQAPLTDKCFSRDGRLYCRQDFYRRY 61
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
GC G+S + L+ A + +H C C C LS +
Sbjct: 62 GTKCGGCAEGISPNDLVRRA--------------RNKVFHLKCFTCMVCRKQLSTGEELY 107
Query: 118 FSREGKLFCRNDFF 131
E K C++D+
Sbjct: 108 VLDENKFICKSDYL 121
>gi|345497659|ref|XP_001601152.2| PREDICTED: LIM/homeobox protein Lhx5-like [Nasonia vitripennis]
Length = 475
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 55/114 (48%), Positives = 70/114 (61%), Gaps = 14/114 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
ML+SCAGC+KPI+DKFL NVL+R WHADCVRC DC + L +KCFSRE KLFCRNDFF+
Sbjct: 1 MLLSCAGCDKPIMDKFLFNVLDRAWHADCVRCCDCRNPLQEKCFSREAKLFCRNDFFKRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
GC G++ S L+ A ++ +H +C C C +S
Sbjct: 61 GTKCGGCSQGINPSDLVRKA--------------RDKVFHLNCFTCLVCRKQMS 100
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/57 (77%), Positives = 50/57 (87%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
ML+SCAGC+KPI+DKFL NVL+R WHADCVRC DC + L +KCFSRE KLFCRNDFF
Sbjct: 1 MLLSCAGCDKPIMDKFLFNVLDRAWHADCVRCCDCRNPLQEKCFSREAKLFCRNDFF 57
>gi|158287501|ref|XP_309513.3| AGAP011134-PA [Anopheles gambiae str. PEST]
gi|157019681|gb|EAA05265.3| AGAP011134-PA [Anopheles gambiae str. PEST]
Length = 501
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 57/73 (78%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +CH L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLI 77
SGCG G++ S L+
Sbjct: 87 SGCGQGIAPSDLV 99
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/59 (74%), Positives = 48/59 (81%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + CAGC KPILDKFLLNVLER WHA CVRC +CH L+DKCFSRE KL+CRNDFF
Sbjct: 21 SGLGDPCAGCNKPILDKFLLNVLERGWHATCVRCCECHQPLADKCFSRESKLYCRNDFF 79
>gi|355564712|gb|EHH21212.1| hypothetical protein EGK_04224, partial [Macaca mulatta]
Length = 293
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 78/134 (58%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 GTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
E K C++D+
Sbjct: 107 VIDENKFVCKDDYL 120
>gi|348551170|ref|XP_003461403.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Cavia porcellus]
Length = 404
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|403281850|ref|XP_003932386.1| PREDICTED: LIM/homeobox protein Lhx5 [Saimiri boliviensis
boliviensis]
Length = 385
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|260793678|ref|XP_002591838.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277049|gb|EEN47849.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 402
Score = 105 bits (261), Expect = 8e-21, Method: Composition-based stats.
Identities = 49/129 (37%), Positives = 76/129 (58%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFSR+G ++C++DFFR
Sbjct: 41 CAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFRRFGTKC 100
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+GCG G+ + ++ A ++ +H C C C L+ D+ + E
Sbjct: 101 AGCGQGIPPTQVVRRAQ--------------DKIYHLQCFACIMCKRQLATGDEFYLMED 146
Query: 122 GKLFCRNDF 130
KL C++D+
Sbjct: 147 AKLVCKSDY 155
Score = 90.1 bits (222), Expect = 3e-16, Method: Composition-based stats.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS 119
P P + ++S + CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFS
Sbjct: 22 PSSAPVLMDIRVNSPNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFS 81
Query: 120 REGKLFCRNDFF 131
R+G ++C++DFF
Sbjct: 82 RDGHVYCKDDFF 93
>gi|355786560|gb|EHH66743.1| hypothetical protein EGM_03791, partial [Macaca fascicularis]
Length = 306
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 78/134 (58%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFRRF 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 GTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
E K C++D+
Sbjct: 107 VIDENKFVCKDDYL 120
>gi|338727662|ref|XP_001915147.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like
[Equus caballus]
Length = 403
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKANLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|281343471|gb|EFB19055.1| hypothetical protein PANDA_014809 [Ailuropoda melanoleuca]
Length = 354
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|109098848|ref|XP_001111705.1| PREDICTED: LIM/homeobox protein Lhx5-like [Macaca mulatta]
gi|296213013|ref|XP_002753087.1| PREDICTED: LIM/homeobox protein Lhx5 [Callithrix jacchus]
gi|297693055|ref|XP_002823842.1| PREDICTED: LIM/homeobox protein Lhx5 [Pongo abelii]
gi|402887767|ref|XP_003907254.1| PREDICTED: LIM/homeobox protein Lhx5 [Papio anubis]
Length = 402
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|11641283|ref|NP_071758.1| LIM/homeobox protein Lhx5 [Homo sapiens]
gi|332840493|ref|XP_001153819.2| PREDICTED: LIM/homeobox protein Lhx5 [Pan troglodytes]
gi|397525022|ref|XP_003832477.1| PREDICTED: LIM/homeobox protein Lhx5 [Pan paniscus]
gi|426374256|ref|XP_004053995.1| PREDICTED: LIM/homeobox protein Lhx5 [Gorilla gorilla gorilla]
gi|18202938|sp|Q9H2C1.1|LHX5_HUMAN RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|11527289|gb|AAG36963.1|AF291181_1 LHX5 protein [Homo sapiens]
gi|80475867|gb|AAI09231.1| LIM homeobox 5 [Homo sapiens]
gi|119618466|gb|EAW98060.1| LIM homeobox 5 [Homo sapiens]
gi|261861188|dbj|BAI47116.1| LIM homeobox 5 [synthetic construct]
Length = 402
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|431914229|gb|ELK15487.1| LIM/homeobox protein Lhx5 [Pteropus alecto]
Length = 402
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|440898273|gb|ELR49802.1| LIM/homeobox protein Lhx5, partial [Bos grunniens mutus]
Length = 376
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|395833990|ref|XP_003790000.1| PREDICTED: LIM/homeobox protein Lhx5 [Otolemur garnettii]
Length = 402
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|344295258|ref|XP_003419329.1| PREDICTED: LIM/homeobox protein Lhx5-like [Loxodonta africana]
Length = 402
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|345790894|ref|XP_543409.3| PREDICTED: LIM/homeobox protein Lhx5 [Canis lupus familiaris]
Length = 402
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|156120769|ref|NP_001095531.1| LIM/homeobox protein Lhx5 [Bos taurus]
gi|151557071|gb|AAI50044.1| LHX5 protein [Bos taurus]
gi|296478515|tpg|DAA20630.1| TPA: LIM homeobox protein 5 [Bos taurus]
Length = 402
Score = 104 bits (260), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|390335971|ref|XP_780701.3| PREDICTED: LIM/homeobox protein Lhx3-like [Strongylocentrotus
purpuratus]
Length = 545
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC+ PILD+F+L V++R WHA C+RC DC+ L+D+CFSR+G +FC+ DFF+ RF
Sbjct: 147 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFFK---RFG 203
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF-SR 120
+ C+ CEK I + + L+ +H C C C LS D+ F
Sbjct: 204 T------------KCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMT 251
Query: 121 EGKLFCRNDF 130
+ KL C+ D+
Sbjct: 252 DNKLVCKQDY 261
Score = 89.4 bits (220), Expect = 5e-16, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC+ PILD+F+L V++R WHA C+RC DC+ L+D+CFSR+G +FC+ DFF
Sbjct: 147 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFF 199
>gi|6678690|ref|NP_032525.1| LIM/homeobox protein Lhx5 [Mus musculus]
gi|20514764|ref|NP_620605.1| LIM/homeobox protein Lhx5 [Rattus norvegicus]
gi|47606426|sp|P61376.1|LHX5_RAT RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-2
gi|47606427|sp|P61375.1|LHX5_MOUSE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5
gi|531220|gb|AAA62162.1| amino acid feature: homeodomain, bp 895 .. 1074; amino acid
feature: LIM1, bp 373 .. 516; amino acid feature: LIM2,
bp 550 .. 705 [Rattus norvegicus]
gi|1388183|gb|AAC52842.1| LIM/homeodomain [Mus musculus]
gi|26329557|dbj|BAC28517.1| unnamed protein product [Mus musculus]
gi|26339568|dbj|BAC33455.1| unnamed protein product [Mus musculus]
gi|34784227|gb|AAH57585.1| LIM homeobox protein 5 [Mus musculus]
gi|74148661|dbj|BAE24281.1| unnamed protein product [Mus musculus]
gi|148687827|gb|EDL19774.1| LIM homeobox protein 5 [Mus musculus]
gi|149063463|gb|EDM13786.1| LIM homeobox protein 5 [Rattus norvegicus]
Length = 402
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|426247330|ref|XP_004017439.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5 [Ovis
aries]
Length = 386
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|351694748|gb|EHA97666.1| LIM/homeobox protein Lhx5 [Heterocephalus glaber]
Length = 402
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 79/137 (57%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C+ D+
Sbjct: 104 ELYVIDENKFVCKEDYL 120
>gi|354497499|ref|XP_003510857.1| PREDICTED: LIM/homeobox protein Lhx5-like [Cricetulus griseus]
gi|344257745|gb|EGW13849.1| LIM/homeobox protein Lhx5 [Cricetulus griseus]
Length = 402
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|444723048|gb|ELW63713.1| LIM/homeobox protein Lhx5 [Tupaia chinensis]
Length = 610
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|311270693|ref|XP_003132949.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5-like [Sus
scrofa]
Length = 402
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECXTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|291407015|ref|XP_002719805.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 402
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 59/137 (43%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RGKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C++D+
Sbjct: 104 ELYVIDENKFVCKDDYL 120
>gi|307197382|gb|EFN78657.1| LIM/homeobox protein Lhx5 [Harpegnathos saltator]
Length = 142
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 53/61 (86%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
ML+SCAGC+KPI+D++LLNVL+R WH +CVRC+DC TL DKCFSRE KLFCRNDFF SP
Sbjct: 17 MLLSCAGCDKPIMDQYLLNVLDRAWHVECVRCFDCRITLQDKCFSREAKLFCRNDFFSSP 76
Query: 61 V 61
Sbjct: 77 T 77
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 43/58 (74%), Positives = 52/58 (89%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ML+SCAGC+KPI+D++LLNVL+R WH +CVRC+DC TL DKCFSRE KLFCRNDFF
Sbjct: 16 AMLLSCAGCDKPIMDQYLLNVLDRAWHVECVRCFDCRITLQDKCFSREAKLFCRNDFF 73
>gi|195354923|ref|XP_002043945.1| GM13699 [Drosophila sechellia]
gi|194129190|gb|EDW51233.1| GM13699 [Drosophila sechellia]
Length = 424
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/130 (46%), Positives = 78/130 (60%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDFF 131
K C++D+
Sbjct: 133 NKFICKDDYL 142
>gi|334327218|ref|XP_001378455.2| PREDICTED: LIM/homeobox protein Lhx5-like [Monodelphis domestica]
Length = 303
Score = 102 bits (255), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRF 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 GTKCAGCAQGISPSDLVRKA--------------RSKVFHLNCFTCMVCNKQLSTGEELY 106
Query: 118 FSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IIDENKFVCKEDYL 120
>gi|229619792|dbj|BAH58094.1| LIM homeobox protein 3 [Hemicentrotus pulcherrimus]
Length = 485
Score = 102 bits (254), Expect = 5e-20, Method: Composition-based stats.
Identities = 52/130 (40%), Positives = 75/130 (57%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC+ PILD+F+L V++R WHA C+RC DC+ L+D+CFSR+G +FC+ DFF+ RF
Sbjct: 87 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFFK---RFG 143
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF-SR 120
+ C+ CEK I + + L+ +H C C C LS D+ F
Sbjct: 144 T------------KCSSCEKGIAPTEIVRRALDNVYHLHCFCCIICTRQLSTGDEFFLMT 191
Query: 121 EGKLFCRNDF 130
+ KL C+ D+
Sbjct: 192 DNKLVCKQDY 201
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC+ PILD+F+L V++R WHA C+RC DC+ L+D+CFSR+G +FC+ DFF
Sbjct: 87 CAGCDHPILDRFILKVVDRAWHAKCLRCVDCNAQLTDRCFSRDGGVFCKEDFF 139
>gi|363740116|ref|XP_001234553.2| PREDICTED: LIM/homeobox protein Lhx5 [Gallus gallus]
Length = 402
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCSQGISPSDLVRKA--------------RNKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C+ D+
Sbjct: 104 ELYIIDENKFVCKEDYL 120
>gi|327282632|ref|XP_003226046.1| PREDICTED: LIM/homeobox protein Lhx5-like [Anolis carolinensis]
Length = 400
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/137 (42%), Positives = 79/137 (57%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCAQGISPSDLVRKA--------------RGKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C+ D+
Sbjct: 104 ELYIIDENKFVCKEDYL 120
>gi|322796242|gb|EFZ18818.1| hypothetical protein SINV_14480 [Solenopsis invicta]
Length = 58
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 44/58 (75%), Positives = 51/58 (87%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
ML+SCAGCEKPI+D++LLNVL+R WH +CVRC+DC L DKCFSRE KLFCRNDFFR
Sbjct: 1 MLLSCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRAALQDKCFSREAKLFCRNDFFR 58
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 43/57 (75%), Positives = 50/57 (87%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
ML+SCAGCEKPI+D++LLNVL+R WH +CVRC+DC L DKCFSRE KLFCRNDFF
Sbjct: 1 MLLSCAGCEKPIMDQYLLNVLDRAWHVECVRCFDCRAALQDKCFSREAKLFCRNDFF 57
>gi|170051196|ref|XP_001861655.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167872532|gb|EDS35915.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 284
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 45/54 (83%), Positives = 47/54 (87%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC KPILDKFLLNVLER WHA CVRC +CH LSDKCFSRE KL+CRNDFFR
Sbjct: 108 CAGCNKPILDKFLLNVLERGWHASCVRCCECHQPLSDKCFSRESKLYCRNDFFR 161
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/59 (76%), Positives = 49/59 (83%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S ++ CAGC KPILDKFLLNVLER WHA CVRC +CH LSDKCFSRE KL+CRNDFF
Sbjct: 102 SGVVDPCAGCNKPILDKFLLNVLERGWHASCVRCCECHQPLSDKCFSRESKLYCRNDFF 160
>gi|62859483|ref|NP_001016082.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|89269010|emb|CAJ81605.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|189441838|gb|AAI67665.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624072|gb|AAI70608.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
gi|213624092|gb|AAI70634.1| LIM homeobox 5 [Xenopus (Silurana) tropicalis]
Length = 402
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 79/136 (58%), Gaps = 23/136 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+ DFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC +G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCSLGISPSDLVRKA--------------RNKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDF 130
+ E K C+ D+
Sbjct: 104 ELYIIDENKFVCKEDY 119
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 48/57 (84%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+ DFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFF 57
>gi|126307650|ref|XP_001371228.1| PREDICTED: LIM/homeobox protein Lhx1-like [Monodelphis domestica]
Length = 412
Score = 100 bits (248), Expect = 3e-19, Method: Composition-based stats.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR+
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRASG 60
Query: 62 RFPSG 66
F G
Sbjct: 61 LFTFG 65
Score = 96.3 bits (238), Expect = 3e-18, Method: Composition-based stats.
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>gi|449282069|gb|EMC88978.1| LIM/homeobox protein Lhx1 [Columba livia]
Length = 400
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 23/133 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 58 ---AGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 100
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 101 IDENKFVCKEDYL 113
>gi|295656539|gb|ADG26732.1| Lhx1/5 [Platynereis dumerilii]
Length = 291
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 77/136 (56%), Gaps = 23/136 (16%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WHA CV+C +C L+DKCFSREGKL+CR+DFFR
Sbjct: 1 MVVCAGCDRPILDRFLLNVLDRAWHAQCVQCTECKAHLTDKCFSREGKLYCRDDFFR--- 57
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---D 115
RF + GC G+S + L+ A + +H C C C LS +
Sbjct: 58 RFGTKCGGCSQGISPNDLVRRA--------------RNKVFHLKCFTCMVCRKQLSTGEE 103
Query: 116 KCFSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 104 LYVLDENKFICKEDYL 119
>gi|321455236|gb|EFX66374.1| hypothetical protein DAPPUDRAFT_11288 [Daphnia pulex]
Length = 349
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/130 (42%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILDKFLL VL+RTWHA+CVRC DC + L+++CFSR+GKL+CR DFFR
Sbjct: 1 CAGCDRAILDKFLLTVLDRTWHAECVRCADCRNILAERCFSRDGKLYCRTDFFRRYGTKC 60
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFSRE 121
GCG GLS + L+ A ++ +H C C C LS + +
Sbjct: 61 GGCGQGLSPTDLVRKA--------------RDKVYHLRCFTCALCRRQLSTGEELYLLDD 106
Query: 122 GKLFCRNDFF 131
+ C+ DF
Sbjct: 107 ARFLCKEDFI 116
>gi|196011854|ref|XP_002115790.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
gi|190581566|gb|EDV21642.1| hypothetical protein TRIADDRAFT_30033 [Trichoplax adhaerens]
Length = 292
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ISCAGC+ PI DKFLL+VL+R WH CV+C C LS+KCFSR+GKL+CRNDF+R+
Sbjct: 1 MISCAGCQLPICDKFLLSVLDRKWHTKCVQCSQCKVQLSEKCFSRDGKLYCRNDFYRTYG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
SGCG+G+ + L+ A + +H C++C C +S
Sbjct: 61 TKCSGCGIGIPPNELVRRA--------------RDDVYHIKCLKCAICGRQMS 99
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 46/56 (82%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ISCAGC+ PI DKFLL+VL+R WH CV+C C LS+KCFSR+GKL+CRNDF+
Sbjct: 1 MISCAGCQLPICDKFLLSVLDRKWHTKCVQCSQCKVQLSEKCFSRDGKLYCRNDFY 56
>gi|147902022|ref|NP_001084038.1| LIM/homeobox protein Lhx5 [Xenopus laevis]
gi|1708831|sp|P37137.2|LHX5_XENLA RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5; Short=xLIM-5;
AltName: Full=xLIM-2A
gi|840658|gb|AAA99464.1| LIM class homeodomain protein [Xenopus laevis]
gi|54311470|gb|AAH84744.1| Lim5/Lhx5 protein [Xenopus laevis]
Length = 402
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 78/137 (56%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+ DFFR
Sbjct: 1 MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC +G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCSLGISPSDLVRKA--------------RNKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C+ D+
Sbjct: 104 ELYIIDENKFVCKEDYI 120
>gi|426238599|ref|XP_004013238.1| PREDICTED: LIM/homeobox protein Lhx1 [Ovis aries]
Length = 388
Score = 99.0 bits (245), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 23/136 (16%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFP---SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---D 115
RF SGC G+S S L+ A + +H +C C C+ LS +
Sbjct: 58 RFGLCVSGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 116 KCFSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 104 LYIIDENKFVCKEDYL 119
>gi|2384698|gb|AAB70190.1| homeobox protein Lim-1 [Xenopus laevis]
Length = 112
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 68/113 (60%), Gaps = 14/113 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRRFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
+GC G+S S L+ + +H +C C C+ LS
Sbjct: 61 TKCAGCAQGISPSDLVR--------------RARSKVFHLNCFTCMMCNKQLS 99
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>gi|18858979|ref|NP_571282.1| LIM homeobox 1b [Danio rerio]
gi|2155289|gb|AAB58796.1| LIM class homeodomain protein [Danio rerio]
gi|190336839|gb|AAI62280.1| LIM homeobox 1b [Danio rerio]
gi|190340149|gb|AAI62303.1| LIM homeobox 1b [Danio rerio]
Length = 402
Score = 98.6 bits (244), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLL+VL+R WHA CV+C DC +L+D+CFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSREGRLYCKNDFFRRYG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCGGCAQGISPSDLVRKA--------------RSKVFHLNCFTCIMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 LDEYKFVCKEDYL 119
>gi|18858973|ref|NP_571291.1| LIM/homeobox protein Lhx1 [Danio rerio]
gi|2497670|sp|Q90476.1|LHX1_DANRE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|577525|gb|AAA92157.1| homeodomain protein [Danio rerio]
gi|190336961|gb|AAI62664.1| LIM homeobox 1a [Danio rerio]
gi|190339482|gb|AAI62396.1| LIM homeobox 1a [Danio rerio]
Length = 405
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 77/134 (57%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
RF CAGC + I L+ + +H +C C C+ LS +
Sbjct: 58 RF------------GTKCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 118 FSREGKLFCRNDFF 131
E K C++D+
Sbjct: 106 IIDENKFVCKDDYL 119
>gi|340722532|ref|XP_003399658.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus terrestris]
Length = 486
Score = 97.8 bits (242), Expect = 1e-18, Method: Composition-based stats.
Identities = 52/132 (39%), Positives = 72/132 (54%), Gaps = 20/132 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+ RF
Sbjct: 111 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKYGRRFG 170
Query: 65 S---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ GCG GL+ S ++ A E +H C C C L D+ +
Sbjct: 171 TKCAGCGQGLAPSQVVRRAQ--------------ELIYHLTCFSCALCSRQLDTGDEFYL 216
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 217 MEDRKLVCKPDY 228
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 31/53 (58%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 111 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 163
>gi|348532229|ref|XP_003453609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 407
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
RF + CG GC + I L+ + +H +C C C+ LS +
Sbjct: 58 RFGTKCG------------GCSQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 118 FSREGKLFCRNDFF 131
E K C++D+
Sbjct: 106 IIDENKFVCKDDYL 119
>gi|62020648|gb|AAH20470.1| LHX1 protein, partial [Homo sapiens]
Length = 260
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|391342697|ref|XP_003745652.1| PREDICTED: LIM/homeobox protein Lhx1-like [Metaseiulus
occidentalis]
Length = 363
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/134 (41%), Positives = 78/134 (58%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLL+VL+R+WHA CV+C DC +LS+KCFSR+GKLFCR+DF++
Sbjct: 3 MVQCAGCERPILDRFLLHVLDRSWHAKCVQCSDCRCSLSEKCFSRDGKLFCRSDFYK--- 59
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
RF + CAGC + I L+ + +H C C C LS +
Sbjct: 60 RFGT------------KCAGCAQGISPTDLVRRARSKVFHLKCFTCLVCRKQLSTGEELY 107
Query: 118 FSREGKLFCRNDFF 131
E + C+ D+
Sbjct: 108 VLDENRFICKEDYL 121
>gi|432113616|gb|ELK35898.1| LIM/homeobox protein Lhx1 [Myotis davidii]
Length = 272
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|194390004|dbj|BAG60518.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|18858977|ref|NP_571293.1| LIM/homeobox protein Lhx5 [Danio rerio]
gi|1708830|sp|P52889.1|LHX5_DANRE RecName: Full=LIM/homeobox protein Lhx5; Short=LIM homeobox protein
5; AltName: Full=Homeobox protein LIM-5
gi|840664|gb|AAA99465.1| LIM class homeodomain protein [Danio rerio]
gi|68534671|gb|AAH98523.1| LIM homeobox 5 [Danio rerio]
Length = 399
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/137 (41%), Positives = 80/137 (58%), Gaps = 23/137 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C+ L++KCFSR+GKL+C+ DFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCLQGISPSDLVRRA--------------RSKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDFF 131
+ E K C+ D+
Sbjct: 104 ELYVIDENKFVCKEDYL 120
>gi|47224946|emb|CAG06516.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 23/136 (16%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFR--- 57
Query: 62 RFPSGCG---VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---D 115
RF + CG G+S + L+ A + +H +C C C+ LS +
Sbjct: 58 RFGTKCGGCFQGISPNDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 116 KCFSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 104 LYIIDENKFVCKEDYL 119
>gi|410930167|ref|XP_003978470.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 408
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 78/136 (57%), Gaps = 23/136 (16%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFR--- 57
Query: 62 RFPSGCG---VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---D 115
RF + CG G+S + L+ A + +H +C C C+ LS +
Sbjct: 58 RFGTKCGGCFQGISPNDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEE 103
Query: 116 KCFSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 104 LYIIDENKFVCKEDYL 119
>gi|332250744|ref|XP_003274511.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Nomascus leucogenys]
Length = 323
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 40/58 (68%), Positives = 50/58 (86%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR 58
Score = 94.4 bits (233), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>gi|348525932|ref|XP_003450475.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oreochromis niloticus]
Length = 399
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 74/133 (55%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CA CEKPILD+FLL VL+R WH CV+C DC +L++KCFSREGKL+C+NDFFR
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHIKCVQCCDCKCSLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
CAGC + IL L+ + +H +C C C+ LS +
Sbjct: 58 ------------KFGTKCAGCAQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELY 105
Query: 118 FSREGKLFCRNDF 130
E K C+ D+
Sbjct: 106 ILDEFKFVCKEDY 118
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/56 (66%), Positives = 47/56 (83%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CA CEKPILD+FLL VL+R WH CV+C DC +L++KCFSREGKL+C+NDFF
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHIKCVQCCDCKCSLTEKCFSREGKLYCKNDFF 56
>gi|380012090|ref|XP_003690122.1| PREDICTED: LIM/homeobox protein Lhx3-like [Apis florea]
Length = 465
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 93 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKRFGTKC 152
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+GCG GL+ S ++ A E +H C C C L D+ + E
Sbjct: 153 AGCGQGLAPSQVVRRAQ--------------ELIYHLTCFSCALCSRQLDTGDEFYLMED 198
Query: 123 -KLFCRNDF 130
KL C+ D+
Sbjct: 199 RKLVCKPDY 207
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 88 SSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 145
>gi|301776020|ref|XP_002923422.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1-like
[Ailuropoda melanoleuca]
Length = 405
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|328782955|ref|XP_394135.3| PREDICTED: LIM/homeobox protein Lhx3 [Apis mellifera]
Length = 442
Score = 95.9 bits (237), Expect = 5e-18, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKRFGTKC 150
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+GCG GL+ S ++ A E +H C C C L D+ + E
Sbjct: 151 AGCGQGLAPSQVVRRAQ--------------ELIYHLTCFSCALCSRQLDTGDEFYLMED 196
Query: 123 -KLFCRNDF 130
KL C+ D+
Sbjct: 197 RKLVCKPDY 205
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 86 SSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 143
>gi|157428018|ref|NP_001098917.1| LIM/homeobox protein Lhx1 [Bos taurus]
gi|358417202|ref|XP_003583582.1| PREDICTED: LIM/homeobox protein Lhx1-like [Bos taurus]
gi|157279406|gb|AAI53213.1| LHX1 protein [Bos taurus]
gi|296477035|tpg|DAA19150.1| TPA: LIM homeobox protein 1 [Bos taurus]
gi|440905066|gb|ELR55504.1| LIM/homeobox protein Lhx1 [Bos grunniens mutus]
Length = 406
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|395845905|ref|XP_003795658.1| PREDICTED: LIM/homeobox protein Lhx1 [Otolemur garnettii]
Length = 407
Score = 95.9 bits (237), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|371573886|gb|AEX38313.1| Lhx3 [Mnemiopsis leidyi]
Length = 507
Score = 95.5 bits (236), Expect = 5e-18, Method: Composition-based stats.
Identities = 48/133 (36%), Positives = 75/133 (56%), Gaps = 25/133 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++PI D+F+L V+E+ WH+ C++C+DC L+DKCFSR ++C++DF++ R+
Sbjct: 126 CAGCDQPITDRFILKVMEKNWHSACLKCHDCLAQLTDKCFSRGDFVYCKDDFYK---RYG 182
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLER----TWHADCVRCYDCHHTLS---DKC 117
+ CA CEK I V+ R +H DC C C TL+ +
Sbjct: 183 T------------KCAKCEKVIPPS---QVVRRAGGHVFHMDCFVCIICSRTLNTGDEFY 227
Query: 118 FSREGKLFCRNDF 130
F + +L CR+D+
Sbjct: 228 FVDDNQLVCRSDY 240
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/61 (44%), Positives = 48/61 (78%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
++ +++ CAGC++PI D+F+L V+E+ WH+ C++C+DC L+DKCFSR ++C++DF
Sbjct: 118 VTGAVVPRCAGCDQPITDRFILKVMEKNWHSACLKCHDCLAQLTDKCFSRGDFVYCKDDF 177
Query: 131 F 131
+
Sbjct: 178 Y 178
>gi|344285733|ref|XP_003414614.1| PREDICTED: LIM/homeobox protein Lhx1-like [Loxodonta africana]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|291405647|ref|XP_002719296.1| PREDICTED: LIM homeobox protein 5 [Oryctolagus cuniculus]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|431890885|gb|ELK01764.1| LIM/homeobox protein Lhx1 [Pteropus alecto]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|30410785|ref|NP_005559.2| LIM/homeobox protein Lhx1 [Homo sapiens]
gi|60416412|sp|P48742.2|LHX1_HUMAN RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=hLim-1
gi|75517203|gb|AAI01675.1| LIM homeobox 1 [Homo sapiens]
gi|85565997|gb|AAI11937.1| LIM homeobox 1 [Homo sapiens]
gi|119577978|gb|EAW57574.1| LIM homeobox 1 [Homo sapiens]
gi|167773161|gb|ABZ92015.1| LIM homeobox 1 [synthetic construct]
gi|208966670|dbj|BAG73349.1| LIM homeobox 1 [synthetic construct]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|296201935|ref|XP_002748333.1| PREDICTED: LIM/homeobox protein Lhx1 [Callithrix jacchus]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|332258740|ref|XP_003278453.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1 [Nomascus
leucogenys]
Length = 374
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|76573889|ref|NP_001029088.1| LIM/homeobox protein Lhx1 [Pan troglodytes]
gi|297700651|ref|XP_002827352.1| PREDICTED: LIM/homeobox protein Lhx1 [Pongo abelii]
gi|311267821|ref|XP_003131754.1| PREDICTED: LIM/homeobox protein Lhx1-like [Sus scrofa]
gi|348567695|ref|XP_003469634.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cavia porcellus]
gi|359320451|ref|XP_003639347.1| PREDICTED: LIM/homeobox protein Lhx1-like [Canis lupus familiaris]
gi|397494263|ref|XP_003818003.1| PREDICTED: LIM/homeobox protein Lhx1 [Pan paniscus]
gi|402899902|ref|XP_003912923.1| PREDICTED: LIM/homeobox protein Lhx1 [Papio anubis]
gi|403274736|ref|XP_003929119.1| PREDICTED: LIM/homeobox protein Lhx1 [Saimiri boliviensis
boliviensis]
gi|410980542|ref|XP_003996636.1| PREDICTED: LIM/homeobox protein Lhx1 [Felis catus]
gi|426348609|ref|XP_004041924.1| PREDICTED: LIM/homeobox protein Lhx1 [Gorilla gorilla gorilla]
gi|60389888|sp|Q5IS44.1|LHX1_PANTR RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|60389889|sp|Q5IS89.1|LHX1_SAIBB RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|56122252|gb|AAV74277.1| LIM homeobox protein 1 [Saimiri boliviensis]
gi|56122342|gb|AAV74322.1| LIM homeobox protein 1 [Pan troglodytes]
gi|355568607|gb|EHH24888.1| LIM/homeobox protein Lhx1 [Macaca mulatta]
gi|444720995|gb|ELW61755.1| LIM/homeobox protein Lhx1 [Tupaia chinensis]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|395531962|ref|XP_003768042.1| PREDICTED: LIM/homeobox protein Lhx1 [Sarcophilus harrisii]
Length = 406
Score = 95.5 bits (236), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|6678688|ref|NP_032524.1| LIM/homeobox protein Lhx1 [Mus musculus]
gi|94400804|ref|NP_665887.3| LIM/homeobox protein Lhx1 [Rattus norvegicus]
gi|354477124|ref|XP_003500772.1| PREDICTED: LIM/homeobox protein Lhx1-like [Cricetulus griseus]
gi|51702761|sp|P63007.1|LHX1_RAT RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1; Short=Rlim
gi|51702763|sp|P63006.1|LHX1_MOUSE RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein Lim-1
gi|51702764|sp|P63008.1|LHX1_MESAU RecName: Full=LIM/homeobox protein Lhx1; Short=LIM homeobox protein
1; AltName: Full=Homeobox protein LMX-2; AltName:
Full=Homeobox protein Lim-1
gi|2144068|pir||I58187 homeotic protein lim-1 - rat
gi|425217|emb|CAA81797.1| lim1 [Mus musculus]
gi|559636|gb|AAC60696.1| transcription factor [Rattus sp.]
gi|587463|emb|CAA57164.1| lmx2 [Mesocricetus auratus]
gi|4104801|gb|AAD02169.1| homeobox protein Lim1 [Mus musculus]
gi|62201098|gb|AAH92374.1| Lhx1 protein [Mus musculus]
gi|148683791|gb|EDL15738.1| LIM homeobox protein 1 [Mus musculus]
gi|149053699|gb|EDM05516.1| LIM homeobox protein 1 [Rattus norvegicus]
Length = 406
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|383858395|ref|XP_003704687.1| PREDICTED: LIM/homeobox protein Lhx3-like [Megachile rotundata]
Length = 463
Score = 95.5 bits (236), Expect = 6e-18, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKRFGTKC 150
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+GCG GL+ S ++ A E +H C C C L D+ + E
Sbjct: 151 AGCGQGLAPSQVVRRAQ--------------ELVYHLTCFSCALCSRQLDTGDEFYLMED 196
Query: 123 -KLFCRNDF 130
KL C+ D+
Sbjct: 197 RKLVCKPDY 205
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 86 SSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 143
>gi|351696664|gb|EHA99582.1| LIM/homeobox protein Lhx1 [Heterocephalus glaber]
Length = 406
Score = 95.5 bits (236), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 76/133 (57%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|350418514|ref|XP_003491882.1| PREDICTED: LIM/homeobox protein Lhx3-like [Bombus impatiens]
Length = 463
Score = 95.5 bits (236), Expect = 7e-18, Method: Composition-based stats.
Identities = 50/129 (38%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 91 CGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFKRFGTKC 150
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+GCG GL+ S ++ A E +H C C C L D+ + E
Sbjct: 151 AGCGQGLAPSQVVRRAQ--------------ELIYHLTCFSCALCSRQLDTGDEFYLMED 196
Query: 123 -KLFCRNDF 130
KL C+ D+
Sbjct: 197 RKLVCKPDY 205
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 86 SSIPKCGGCQEAILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 143
>gi|410915338|ref|XP_003971144.1| PREDICTED: LIM/homeobox protein Lhx1-like [Takifugu rubripes]
Length = 397
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 68/114 (59%), Gaps = 16/114 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ C CEKPILD+FLL VL+R WH CV+C DC TLS+KCFSREGKL+C+NDFFR
Sbjct: 1 MLQCTSCEKPILDRFLLKVLDRPWHVKCVQCCDCKCTLSEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS 114
RF + C GC + IL L+ + +H +C C C+ LS
Sbjct: 58 RFGT------------KCDGCAQGILPSDLVRRAKSKVFHLNCFTCMMCNKQLS 99
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ C CEKPILD+FLL VL+R WH CV+C DC TLS+KCFSREGKL+C+NDFF
Sbjct: 1 MLQCTSCEKPILDRFLLKVLDRPWHVKCVQCCDCKCTLSEKCFSREGKLYCKNDFF 56
>gi|549846|gb|AAA21644.1| LIM domain transcription factor LIM-1 [Homo sapiens]
Length = 404
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/134 (40%), Positives = 75/134 (55%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
C CAGC + I L+ + +H +C C C+ LS +
Sbjct: 58 -----C-------FGTKCAGCRQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 118 FSREGKLFCRNDFF 131
E K C+ D+
Sbjct: 106 IIDENKFVCKEDYL 119
>gi|52354701|gb|AAH82847.1| Unknown (protein for MGC:81549) [Xenopus laevis]
Length = 402
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 77/136 (56%), Gaps = 23/136 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSR+ KL+C+ DFFR
Sbjct: 1 MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRDSKLYCKTDFFR-- 58
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--- 114
RF + GC +G+S S L+ A + +H +C C C+ LS
Sbjct: 59 -RFGTKCAGCSLGISPSDLVRKA--------------RNKVFHLNCFTCMVCNKQLSTGE 103
Query: 115 DKCFSREGKLFCRNDF 130
+ E K C+ D+
Sbjct: 104 ELYIIDENKFVCKEDY 119
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/57 (61%), Positives = 46/57 (80%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSR+ KL+C+ DFF
Sbjct: 1 MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRDSKLYCKTDFF 57
>gi|157115167|ref|XP_001652548.1| lim homeobox protein [Aedes aegypti]
gi|108876992|gb|EAT41217.1| AAEL007120-PA [Aedes aegypti]
Length = 459
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + ILD+F+L V +RTWHA C++C DCH L++KCF+R G+LFC++DFF+
Sbjct: 63 CGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFFKRYGTKC 122
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 123 AACDLGIPPTQVVRRAQ--------------DNVYHLQCFMCSMCSRQLNTGDEFYLIED 168
Query: 122 GKLFCRNDF 130
GKL C+ D+
Sbjct: 169 GKLICKPDY 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C DCH L++KCF+R G+LFC++DFF
Sbjct: 58 STIPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFF 115
>gi|157127146|ref|XP_001661055.1| lim homeobox protein [Aedes aegypti]
gi|108873020|gb|EAT37245.1| AAEL010744-PA [Aedes aegypti]
Length = 459
Score = 94.4 bits (233), Expect = 1e-17, Method: Composition-based stats.
Identities = 46/129 (35%), Positives = 72/129 (55%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + ILD+F+L V +RTWHA C++C DCH L++KCF+R G+LFC++DFF+
Sbjct: 63 CGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFFKRYGTKC 122
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 123 AACDLGIPPTQVVRRAQ--------------DNVYHLQCFMCSMCSRQLNTGDEFYLIED 168
Query: 122 GKLFCRNDF 130
GKL C+ D+
Sbjct: 169 GKLICKPDY 177
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 32/58 (55%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C DCH L++KCF+R G+LFC++DFF
Sbjct: 58 STIPKCGGCHELILDRFILKVSDRTWHAKCLQCSDCHIQLNEKCFARNGQLFCKDDFF 115
>gi|260793680|ref|XP_002591839.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
gi|229277050|gb|EEN47850.1| LIM class homeodomain transcription factor, Lhx3 subclass
[Branchiostoma floridae]
Length = 278
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFSR+G ++C++DFFR
Sbjct: 38 IPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFSRDGHVYCKDDFFR--- 94
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
RF + GCG G+ + ++ A ++ +H C C C L+ D+
Sbjct: 95 RFGTKCAGCGQGIPPTQVVRRA--------------QDKIYHLQCFACIMCKRQLATGDE 140
Query: 117 CFSRE-GKLFCRNDF 130
+ E KL C++D+
Sbjct: 141 FYLMEDAKLVCKSDY 155
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 52/72 (72%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS 119
P P + ++S + CAGCE+ ILD+F+L VL+R+WHA C++C DC L+DKCFS
Sbjct: 22 PTSAPVLMDIRVNSPNIPKCAGCEQVILDRFILKVLDRSWHAKCLQCSDCQAQLTDKCFS 81
Query: 120 REGKLFCRNDFF 131
R+G ++C++DFF
Sbjct: 82 RDGHVYCKDDFF 93
>gi|156379960|ref|XP_001631723.1| predicted protein [Nematostella vectensis]
gi|156218768|gb|EDO39660.1| predicted protein [Nematostella vectensis]
Length = 213
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGC+ PI DKFLL VL+ WHA CV+C DC L+++CFSREGKLFC+ DF+R
Sbjct: 1 MVQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGKLFCKTDFYRRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
SGC G+S + ++ A K L+ +H DC C C ++ +
Sbjct: 61 GTKCSGCDQGISPNDMVRRA--------KHLV------FHVDCFVCSYCKRQITTGDELY 106
Query: 118 FSREGKLFCRNDFF 131
+ +G CR+D++
Sbjct: 107 YIGDGSFICRDDYY 120
>gi|55846812|gb|AAV67410.1| LIM homeobox protein 1 [Macaca fascicularis]
Length = 403
Score = 94.0 bits (232), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/130 (41%), Positives = 74/130 (56%), Gaps = 17/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 60
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFSRE 121
+GC G+S S L+ A + +H +C C C+ LS + E
Sbjct: 61 AGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYIIDE 106
Query: 122 GKLFCRNDFF 131
K C+ D+
Sbjct: 107 NKFVCKEDYL 116
>gi|391346181|ref|XP_003747357.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Metaseiulus occidentalis]
Length = 434
Score = 93.6 bits (231), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/128 (35%), Positives = 70/128 (54%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE+PI+D++++ V E +WH C+ C CH L+ C+SRE ++FC+ND+ R F
Sbjct: 59 CAGCERPIVDRYIMKVRESSWHESCLICSVCHQHLATSCYSRERRIFCKNDYDR---LFG 115
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+ C +C G P + ++ L++ +H C C C L D+ R G
Sbjct: 116 AKCA---------ACTGSIAPA--ELVMKALDQVYHLSCFLCCTCGRQLQRGDEYVLRNG 164
Query: 123 KLFCRNDF 130
+L+CR DF
Sbjct: 165 RLYCRQDF 172
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
+ S L CAGCE+PI+D++++ V E +WH C+ C CH L+ C+SRE ++FC+ND+
Sbjct: 52 TGSRLEVCAGCERPIVDRYIMKVRESSWHESCLICSVCHQHLATSCYSRERRIFCKNDY 110
>gi|74187870|dbj|BAE24561.1| unnamed protein product [Mus musculus]
Length = 406
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 75/133 (56%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+ LLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRLLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKCF 118
+GC G+S S L+ A + +H +C C C+ LS +
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 119 SREGKLFCRNDFF 131
E K C+ D+
Sbjct: 107 IDENKFVCKEDYL 119
>gi|229619776|dbj|BAH58087.1| LIM homeobox protein 1 [Nematostella vectensis]
Length = 358
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/134 (39%), Positives = 76/134 (56%), Gaps = 17/134 (12%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGC+ PI DKFLL VL+ WHA CV+C DC L+++CFSREGKLFC+ DF+R
Sbjct: 1 MVQQCAGCQLPIADKFLLKVLDGVWHAQCVQCSDCKCPLTERCFSREGKLFCKTDFYRRY 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS---DKC 117
SGC G+S + ++ A K L+ +H DC C C ++ +
Sbjct: 61 GTKCSGCDQGISPNDMVRRA--------KHLV------FHVDCFVCSYCKRQITTGDELY 106
Query: 118 FSREGKLFCRNDFF 131
+ +G CR+D++
Sbjct: 107 YIGDGSFICRDDYY 120
>gi|449479889|ref|XP_004177057.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx1
[Taeniopygia guttata]
Length = 419
Score = 93.2 bits (230), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 69/113 (61%), Gaps = 14/113 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
+GC G+S S L+ A + +H +C C C+ LS
Sbjct: 61 TKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQLS 99
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>gi|391327822|ref|XP_003738394.1| PREDICTED: LIM/homeobox protein Lhx3-like [Metaseiulus
occidentalis]
Length = 408
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 49/130 (37%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC ILD+F+L VLER WH+ C++C DC L++KCF+R G L+C++DFF+ R+
Sbjct: 54 CAGCGDIILDRFILKVLERPWHSKCLKCSDCQAPLANKCFARAGHLYCKDDFFK---RYG 110
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CAGCE+ I + + E +H C C C L+ D+ + E
Sbjct: 111 T------------KCAGCEQGIPPTQVVRRAQENVYHLACFSCILCKRQLNTGDEFYLME 158
Query: 122 -GKLFCRNDF 130
KL C+ D+
Sbjct: 159 DNKLVCKADY 168
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC ILD+F+L VLER WH+ C++C DC L++KCF+R G L+C++DFF
Sbjct: 54 CAGCGDIILDRFILKVLERPWHSKCLKCSDCQAPLANKCFARAGHLYCKDDFF 106
>gi|397508667|ref|XP_003824769.1| PREDICTED: LIM/homeobox protein Lhx4 [Pan paniscus]
gi|410034179|ref|XP_524984.3| PREDICTED: LIM/homeobox protein Lhx4 [Pan troglodytes]
Length = 466
Score = 92.4 bits (228), Expect = 5e-17, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 106 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 162
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 163 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 210
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 211 DGRLVCKEDY 220
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 96 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 155
Query: 129 DFF 131
DFF
Sbjct: 156 DFF 158
>gi|345325463|ref|XP_003430923.1| PREDICTED: hypothetical protein LOC100085508 [Ornithorhynchus
anatinus]
Length = 884
Score = 92.4 bits (228), Expect = 6e-17, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 580 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 636
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 637 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 684
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 685 DGRLVCKEDY 694
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 580 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFF 632
>gi|170055943|ref|XP_001863808.1| lim homeobox protein [Culex quinquefasciatus]
gi|167875776|gb|EDS39159.1| lim homeobox protein [Culex quinquefasciatus]
Length = 456
Score = 92.0 bits (227), Expect = 6e-17, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + ILD+F+L V +RTWHA C++C +CH L++KCF+R G+LFC++DFF+
Sbjct: 66 CGGCHELILDRFILKVSDRTWHAKCLQCSECHVQLNEKCFARNGQLFCKDDFFKRYGTKC 125
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 126 AACDLGIPPTQVVRRAQ--------------DNVYHLQCFMCSMCSRQLNTGDEFYLMED 171
Query: 122 GKLFCRNDF 130
GKL C+ D+
Sbjct: 172 GKLVCKPDY 180
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 31/58 (53%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C +CH L++KCF+R G+LFC++DFF
Sbjct: 61 STIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECHVQLNEKCFARNGQLFCKDDFF 118
>gi|449477358|ref|XP_004176635.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx5
[Taeniopygia guttata]
Length = 328
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 50/58 (86%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF+
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFQ 58
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 38/57 (66%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFF 57
>gi|327270281|ref|XP_003219918.1| PREDICTED: LIM/homeobox protein Lhx4-like [Anolis carolinensis]
Length = 449
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 89 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 145
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 146 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 193
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 194 DGRLVCKEDY 203
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 89 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFF 141
>gi|432899669|ref|XP_004076609.1| PREDICTED: LIM/homeobox protein Lhx1-like [Oryzias latipes]
Length = 402
Score = 90.9 bits (224), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 76/133 (57%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ C CEKPILD+FLL VL+R WH CV+C +C +L++KCFSR+G+L+C+NDFFR
Sbjct: 1 MLHCTSCEKPILDRFLLKVLDRPWHVKCVQCCECKCSLTEKCFSRDGRLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKC 117
RF + CG GC + IL L+ + +H +C C C+ LS +
Sbjct: 58 RFGTKCG------------GCSQGILPSDLVRRAKSKVFHLNCFTCVMCNKQLSTGEELY 105
Query: 118 FSREGKLFCRNDF 130
E K C+ D+
Sbjct: 106 ILDEFKFVCKEDY 118
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 46/56 (82%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ C CEKPILD+FLL VL+R WH CV+C +C +L++KCFSR+G+L+C+NDFF
Sbjct: 1 MLHCTSCEKPILDRFLLKVLDRPWHVKCVQCCECKCSLTEKCFSRDGRLYCKNDFF 56
>gi|49659006|emb|CAD37944.1| homeobox protein LHX [Suberites domuncula]
Length = 342
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC PI+D+F+L VL++ WH+ C+RC DC L+DKC+SR+G++FC+ DF R RF
Sbjct: 119 CAGCHHPIVDRFILKVLDKPWHSKCLRCVDCDMLLTDKCYSRDGEVFCKADFSR---RFG 175
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSR 120
+ CAGC +PI + + E +H C C+ C LS
Sbjct: 176 T------------RCAGCNQPIPPTQVVRRAQENVYHLQCFACFICSRQLSTGDEFYLMD 223
Query: 121 EGKLFCRNDF 130
+ KL C+ D+
Sbjct: 224 DKKLVCKADY 233
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 46/61 (75%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G +S + CAGC PI+D+F+L VL++ WH+ C+RC DC L+DKC+SR+G++FC+ D
Sbjct: 110 GSNSGNIPCCAGCHHPIVDRFILKVLDKPWHSKCLRCVDCDMLLTDKCYSRDGEVFCKAD 169
Query: 130 F 130
F
Sbjct: 170 F 170
>gi|28316900|gb|AAO39472.1| RE70568p [Drosophila melanogaster]
Length = 523
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 76/135 (56%), Gaps = 20/135 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+S
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKSNR 178
Query: 62 RFP---SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
R+ S C +G+ + ++ A + +H C C C TL+ D+
Sbjct: 179 RYGTKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDE 224
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 225 FYLMEDRKLICKRDY 239
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 117 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 174
>gi|242000638|ref|XP_002434962.1| homeobox protein Lim-1, putative [Ixodes scapularis]
gi|215498292|gb|EEC07786.1| homeobox protein Lim-1, putative [Ixodes scapularis]
Length = 59
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 51/57 (89%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
++ CAGC++PILD+FLLNVL+R+WHA CV+C DC L++KCFSR+GKLFCRNDFF+
Sbjct: 3 MVQCAGCDRPILDRFLLNVLDRSWHAKCVQCCDCRCNLTEKCFSRDGKLFCRNDFFK 59
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/56 (69%), Positives = 50/56 (89%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R+WHA CV+C DC L++KCFSR+GKLFCRNDFF
Sbjct: 3 MVQCAGCDRPILDRFLLNVLDRSWHAKCVQCCDCRCNLTEKCFSRDGKLFCRNDFF 58
>gi|357611533|gb|EHJ67530.1| lim homeobox protein [Danaus plexippus]
Length = 481
Score = 89.7 bits (221), Expect = 4e-16, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I+D+++L V +RTWHA C+RC +C LS KCF+R +L+C DFF+
Sbjct: 136 CGGCHEMIVDRYVLKVSDRTWHAGCLRCVECRAMLSGKCFARNNQLYCTEDFFKRYGTKC 195
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+GCG G+ + ++ A +H C C C TL+ D+ + E
Sbjct: 196 AGCGQGIPPTQVVRRAQAH--------------VYHLRCFACAACARTLNTGDEFYLMED 241
Query: 122 GKLFCRNDF 130
GKL C+ D+
Sbjct: 242 GKLVCKPDY 250
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + I+D+++L V +RTWHA C+RC +C LS KCF+R +L+C DFF
Sbjct: 131 SSIPKCGGCHEMIVDRYVLKVSDRTWHAGCLRCVECRAMLSGKCFARNNQLYCTEDFF 188
>gi|432894991|ref|XP_004076032.1| PREDICTED: LIM/homeobox protein Lhx1 [Oryzias latipes]
Length = 238
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 37/57 (64%), Positives = 49/57 (85%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFFR 57
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREG+L+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGRLYCKNDFF 56
>gi|344254045|gb|EGW10149.1| LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 397
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 46/130 (35%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L D+CFSR G ++C+ DFF+ RF
Sbjct: 10 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKEDFFK---RFG 66
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 67 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 114
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 115 DGRLVCKEDY 124
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH+ C++C DC L D+CFSR G ++C+ DFF
Sbjct: 10 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKEDFF 62
>gi|15706308|dbj|BAB68342.1| Cs-LHX3 [Ciona savignyi]
Length = 472
Score = 88.2 bits (217), Expect = 9e-16, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I D+F+L V ++ WHA C++C DC L+DKCFSR ++C+ DFF+ R+
Sbjct: 78 CTGCAQHIFDRFILKVQDKPWHAQCLKCGDCGRQLTDKCFSRGSFVYCKEDFFK---RYG 134
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF-SR 120
+ CAGC++ I + + E +H +C RC+ C+ L D+ +
Sbjct: 135 T------------KCAGCDEAIPPTEVVRRAQENVYHLECFRCFMCNDQLGTGDQFYLLD 182
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 183 DNRLVCKKDY 192
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC + I D+F+L V ++ WHA C++C DC L+DKCFSR ++C+ DFF
Sbjct: 78 CTGCAQHIFDRFILKVQDKPWHAQCLKCGDCGRQLTDKCFSRGSFVYCKEDFF 130
>gi|344238818|gb|EGV94921.1| LIM/homeobox protein Lhx1 [Cricetulus griseus]
Length = 84
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 49/58 (84%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRS 59
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRQ 58
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>gi|296482212|tpg|DAA24327.1| TPA: LIM homeobox transcription factor 1, beta-like [Bos taurus]
Length = 1019
Score = 87.8 bits (216), Expect = 1e-15, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 673 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 724
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 725 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 777
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 778 GQLLCKGDY 786
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C
Sbjct: 661 CAAGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYC 720
Query: 127 RNDF 130
+ D+
Sbjct: 721 KQDY 724
>gi|195115252|ref|XP_002002178.1| GI17237 [Drosophila mojavensis]
gi|193912753|gb|EDW11620.1| GI17237 [Drosophila mojavensis]
Length = 449
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFF 94
>gi|242011200|ref|XP_002426343.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
gi|212510420|gb|EEB13605.1| LIM/homeobox protein Lhx4, putative [Pediculus humanus corporis]
Length = 366
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 75/133 (56%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC++ ILD+F+L VL+RTWHA C+ C DC L+DKCF+R G+++C++DFF+
Sbjct: 21 IPKCGGCQELILDRFILKVLDRTWHAKCLNCNDCGGPLTDKCFARNGQVYCKDDFFK--- 77
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + CAGCE+ I + + E +H C C C L+ D+ +
Sbjct: 78 RFGT------------KCAGCEQGIPPTQVVRRAQENVYHLQCFACAMCARQLNTGDEFY 125
Query: 119 SREG-KLFCRNDF 130
E KL C+ D+
Sbjct: 126 LMEDKKLVCKPDY 138
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 46/60 (76%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + + C GC++ ILD+F+L VL+RTWHA C+ C DC L+DKCF+R G+++C++DFF
Sbjct: 17 ADASIPKCGGCQELILDRFILKVLDRTWHAKCLNCNDCGGPLTDKCFARNGQVYCKDDFF 76
>gi|195050066|ref|XP_001992820.1| GH13485 [Drosophila grimshawi]
gi|193899879|gb|EDV98745.1| GH13485 [Drosophila grimshawi]
Length = 451
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHSQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHSQLNDKCFARNGQLFCKEDFF 94
>gi|195438224|ref|XP_002067037.1| GK24239 [Drosophila willistoni]
gi|194163122|gb|EDW78023.1| GK24239 [Drosophila willistoni]
Length = 448
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|195484367|ref|XP_002090664.1| GE12672 [Drosophila yakuba]
gi|194176765|gb|EDW90376.1| GE12672 [Drosophila yakuba]
Length = 442
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|4106560|gb|AAD02889.1| LIM homeodomain transcription factor [Drosophila melanogaster]
Length = 440
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|17136270|ref|NP_476606.1| Lim3, isoform A [Drosophila melanogaster]
gi|7298537|gb|AAF53756.1| Lim3, isoform A [Drosophila melanogaster]
Length = 440
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|195580083|ref|XP_002079885.1| GD21780 [Drosophila simulans]
gi|194191894|gb|EDX05470.1| GD21780 [Drosophila simulans]
Length = 438
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|194879752|ref|XP_001974294.1| GG21652 [Drosophila erecta]
gi|190657481|gb|EDV54694.1| GG21652 [Drosophila erecta]
Length = 442
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|312374311|gb|EFR21889.1| hypothetical protein AND_16082 [Anopheles darlingi]
Length = 568
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + ILD+F+L V +RTWHA C++C +C L++KCF+R G+LFC++DFF+
Sbjct: 175 CGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFFKRYGTKC 234
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+ C +G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 235 AACDLGIPPTQVVRRAQ--------------DNVYHLQCFMCSMCSRQLNTGDEYYLMED 280
Query: 123 -KLFCRNDF 130
KL C+ D+
Sbjct: 281 CKLICKPDY 289
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 44/58 (75%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C +C L++KCF+R G+LFC++DFF
Sbjct: 170 STIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFF 227
>gi|237512911|dbj|BAA07578.2| LIM homeodomain protein Hr-Lhx3 a-form [Halocynthia roretzi]
Length = 690
Score = 87.4 bits (215), Expect = 2e-15, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GCE I D+F+L V ++ WH+ C++C DC LS+KCFSR +FC++DFF+
Sbjct: 282 CTGCEHRIFDRFILKVQDKPWHSQCLKCNDCSAQLSEKCFSRGNLVFCKDDFFKRFGTKC 341
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE- 121
+ CG G+ + +I A + +H +C C+ CH + D+ + E
Sbjct: 342 TACGHGIPPTEVIRRAQ--------------DNVYHLECFCCFLCHEKMGTGDQFYLLED 387
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 388 NRLVCKKDY 396
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 38/53 (71%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GCE I D+F+L V ++ WH+ C++C DC LS+KCFSR +FC++DFF
Sbjct: 282 CTGCEHRIFDRFILKVQDKPWHSQCLKCNDCSAQLSEKCFSRGNLVFCKDDFF 334
>gi|194759358|ref|XP_001961916.1| GF15212 [Drosophila ananassae]
gi|190615613|gb|EDV31137.1| GF15212 [Drosophila ananassae]
Length = 444
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 39 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 98
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 99 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 144
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 145 MEDRKLICKRDY 156
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 37 STIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 94
>gi|444730493|gb|ELW70875.1| LIM/homeobox protein Lhx4 [Tupaia chinensis]
Length = 768
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 31/56 (55%), Positives = 44/56 (78%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF++P
Sbjct: 152 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKAP 207
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 45/62 (72%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G + + + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ D
Sbjct: 143 GRAGAEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKED 202
Query: 130 FF 131
FF
Sbjct: 203 FF 204
>gi|442628307|ref|NP_001260559.1| Lim3, isoform G [Drosophila melanogaster]
gi|440213916|gb|AGB93094.1| Lim3, isoform G [Drosophila melanogaster]
Length = 555
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 178
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 179 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 224
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 225 MEDRKLICKRDY 236
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 117 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 174
>gi|195398039|ref|XP_002057632.1| GJ17996 [Drosophila virilis]
gi|194141286|gb|EDW57705.1| GJ17996 [Drosophila virilis]
Length = 545
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 123 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFFKRYG 182
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 183 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 228
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 229 MEDRKLICKRDY 240
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 121 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHAQLNDKCFARNGQLFCKEDFF 178
>gi|405977546|gb|EKC41989.1| LIM/homeobox protein Lhx3 [Crassostrea gigas]
Length = 432
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 82/156 (52%), Gaps = 30/156 (19%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR--- 58
+ CAGC +PILD+F+L VL+R+WH+ C++C+DCH LSDKCFS+ K+FC++DFFR
Sbjct: 44 IPKCAGCGEPILDRFILKVLDRSWHSRCLQCHDCHARLSDKCFSKGEKVFCKDDFFRWSY 103
Query: 59 ----------SPVRFPSGCGVGLSSSML----------ISCAGCEKPILD-KFLLNVLER 97
P+ S GV + CAGCEK I + + +
Sbjct: 104 VYLSMQPDLIGPL---SDHGVTRPPKTVRERVGALRYGTKCAGCEKGIPPTEVVRRAQDN 160
Query: 98 TWHADCVRCYDCHHTLS--DKCFSREG-KLFCRNDF 130
+H +C C C L+ D+ + E KL C+ D+
Sbjct: 161 VYHLECFACLMCSRQLNTGDEFYLMEDRKLVCKADY 196
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 48/58 (82%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + CAGC +PILD+F+L VL+R+WH+ C++C+DCH LSDKCFS+ K+FC++DFF
Sbjct: 42 AAIPKCAGCGEPILDRFILKVLDRSWHSRCLQCHDCHARLSDKCFSKGEKVFCKDDFF 99
>gi|386769869|ref|NP_001246087.1| Lim3, isoform E [Drosophila melanogaster]
gi|383291572|gb|AFH03761.1| Lim3, isoform E [Drosophila melanogaster]
Length = 405
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 4 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 63
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 64 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 109
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 110 MEDRKLICKRDY 121
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 2 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 59
>gi|24585132|ref|NP_724161.1| Lim3, isoform B [Drosophila melanogaster]
gi|386769865|ref|NP_001246085.1| Lim3, isoform C [Drosophila melanogaster]
gi|386769867|ref|NP_001246086.1| Lim3, isoform D [Drosophila melanogaster]
gi|386769871|ref|NP_001246088.1| Lim3, isoform F [Drosophila melanogaster]
gi|22946804|gb|AAF53758.2| Lim3, isoform B [Drosophila melanogaster]
gi|124248338|gb|ABM92789.1| FI01025p [Drosophila melanogaster]
gi|383291570|gb|AFH03759.1| Lim3, isoform C [Drosophila melanogaster]
gi|383291571|gb|AFH03760.1| Lim3, isoform D [Drosophila melanogaster]
gi|383291573|gb|AFH03762.1| Lim3, isoform F [Drosophila melanogaster]
Length = 520
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 119 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 178
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 179 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 224
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 225 MEDRKLICKRDY 236
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 117 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 174
>gi|195345019|ref|XP_002039073.1| GM17030 [Drosophila sechellia]
gi|194134203|gb|EDW55719.1| GM17030 [Drosophila sechellia]
Length = 523
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 124 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 183
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 184 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 229
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 230 MEDRKLICKRDY 241
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 122 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 179
>gi|441636332|ref|XP_003259172.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4 [Nomascus
leucogenys]
Length = 415
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 61/111 (54%), Gaps = 16/111 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 74 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 130
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS 114
+ C C++ I + + + +H C C C+ L+
Sbjct: 131 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLA 169
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 74 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 126
>gi|344308352|ref|XP_003422841.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Loxodonta africana]
Length = 403
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++CR DFFR RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFFR---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++CR DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFF 88
>gi|359070468|ref|XP_002691651.2| PREDICTED: uncharacterized protein LOC100337389 [Bos taurus]
Length = 779
Score = 87.0 bits (214), Expect = 2e-15, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 433 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 484
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 485 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 537
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 538 GQLLCKGDY 546
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C
Sbjct: 421 CAAGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYC 480
Query: 127 RNDF 130
+ D+
Sbjct: 481 KQDY 484
>gi|195164566|ref|XP_002023117.1| GL21131 [Drosophila persimilis]
gi|194105202|gb|EDW27245.1| GL21131 [Drosophila persimilis]
Length = 490
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 95 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 154
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 155 TKCSACDMGIPPTQVVRRA--------------QDHVYHLQCFLCAMCSRTLNTGDEFYL 200
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 201 MEDRKLICKRDY 212
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 93 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 150
>gi|225581041|gb|ACN94618.1| GA10505 [Drosophila miranda]
Length = 499
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 95 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 154
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 155 TKCSACDMGIPPTQVVRRA--------------QDNVYHLQCFLCAMCSRTLNTGDEFYL 200
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 201 MEDRKLICKRDY 212
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 93 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 150
>gi|391759011|dbj|BAM22649.1| LIM homeobox 3/4, partial [Eptatretus burgeri]
Length = 205
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC PI D+FLL LER+WHA C+RC DC LS++CFSR+G L+C+ DFFR RF
Sbjct: 32 CGGCSLPIGDRFLLKALERSWHASCLRCRDCQSPLSERCFSRDGALYCKEDFFR---RFG 88
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSR 120
+ CAGC + I + + ER +H C C C L+
Sbjct: 89 T------------KCAGCRQGIPPSQAVRKAQERVFHLHCFACSLCGRQLATGDLFYLLD 136
Query: 121 EGKLFCRNDF 130
+ +L C++D+
Sbjct: 137 DARLVCQHDY 146
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC PI D+FLL LER+WHA C+RC DC LS++CFSR+G L+C+ DFF
Sbjct: 32 CGGCSLPIGDRFLLKALERSWHASCLRCRDCQSPLSERCFSRDGALYCKEDFF 84
>gi|195164562|ref|XP_002023115.1| GL21181 [Drosophila persimilis]
gi|194105200|gb|EDW27243.1| GL21181 [Drosophila persimilis]
Length = 436
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 45 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 104
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 105 TKCSACDMGIPPTQVVRRA--------------QDHVYHLQCFLCAMCSRTLNTGDEFYL 150
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 151 MEDRKLICKRDY 162
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 42 TATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 100
>gi|198473411|ref|XP_001356286.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
gi|198139444|gb|EAL33349.2| GA10505 [Drosophila pseudoobscura pseudoobscura]
Length = 491
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+
Sbjct: 96 IPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKRYG 155
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
S C +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 156 TKCSACDMGIPPTQVVRRA--------------QDHVYHLQCFLCAMCSRTLNTGDEFYL 201
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 202 MEDRKLICKRDY 213
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 94 ATIPKCGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 151
>gi|344308350|ref|XP_003422840.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Loxodonta africana]
Length = 401
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++CR DFFR RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFFR---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++CR DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCREDFF 86
>gi|340376253|ref|XP_003386648.1| PREDICTED: LIM/homeobox protein Lhx3-like [Amphimedon
queenslandica]
Length = 338
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC I D+F+L V +++WHA C+RC DC LSDKC+SR G+++C++DF + RF
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDKCYSRSGQVYCKDDFSK---RF- 148
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCF-SR 120
CAGC++PI + + E +H C C+ C LS D+ +
Sbjct: 149 -----------GTRCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMD 197
Query: 121 EGKLFCRNDF 130
+ KL C+ D+
Sbjct: 198 DRKLVCKADY 207
>gi|328708425|ref|XP_001944208.2| PREDICTED: LIM/homeobox protein Lhx3-like [Acyrthosiphon pisum]
Length = 375
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC++ ILD+F+L VLERTWHA C++C +C TL+DKCF+R G LFC++DFF+
Sbjct: 42 IPKCGGCQELILDRFILKVLERTWHARCLKCNECGATLADKCFARNGMLFCKDDFFKRYG 101
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC +G+ + ++ A + +H C C C TL+ D+ +
Sbjct: 102 TKCAGCDLGIPPTQIVRRA--------------QDLVYHLQCFACVMCGRTLNTGDEFYL 147
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 148 MEDRKLVCKPDY 159
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/56 (58%), Positives = 45/56 (80%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ C GC++ ILD+F+L VLERTWHA C++C +C TL+DKCF+R G LFC++DFF
Sbjct: 42 IPKCGGCQELILDRFILKVLERTWHARCLKCNECGATLADKCFARNGMLFCKDDFF 97
>gi|449478428|ref|XP_002187534.2| PREDICTED: LIM/homeobox protein Lhx3 [Taeniopygia guttata]
Length = 665
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C + I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACHQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 80
>gi|47197702|emb|CAF89234.1| unnamed protein product [Tetraodon nigroviridis]
Length = 57
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 39/57 (68%), Positives = 47/57 (82%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
++ CA CEKPILD+FLL VL+R WH CV C +C TLS+KCFSREGKL+C+NDFFR
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDFFR 57
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/56 (67%), Positives = 46/56 (82%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CA CEKPILD+FLL VL+R WH CV C +C TLS+KCFSREGKL+C+NDFF
Sbjct: 1 MLQCASCEKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDFF 56
>gi|348574776|ref|XP_003473166.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Cavia porcellus]
Length = 403
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C+RC DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C+RC DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|167859587|gb|ACA04748.1| Lim3 [Amphimedon queenslandica]
Length = 338
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 72/130 (55%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC I D+F+L V +++WHA C+RC DC LSDKC+SR G+++C++DF + RF
Sbjct: 93 CAGCNTRIFDRFILRVQDKSWHAKCLRCSDCQCQLSDKCYSRSGQVYCKDDFSK---RF- 148
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCF-SR 120
CAGC++PI + + E +H C C+ C LS D+ +
Sbjct: 149 -----------GTRCAGCQQPIPPTQVVRRAQENVYHLQCFACFICQRQLSTGDEFYLMD 197
Query: 121 EGKLFCRNDF 130
+ KL C+ D+
Sbjct: 198 DRKLVCKADY 207
>gi|351701911|gb|EHB04830.1| LIM/homeobox protein Lhx3 [Heterocephalus glaber]
Length = 448
Score = 85.9 bits (211), Expect = 4e-15, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 82 CAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 138
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 139 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 186
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 187 DSRLVCKADY 196
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 82 CAGCDQHILDRFVLKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 134
>gi|190336903|gb|AAI62627.1| LIM homeobox 3 [Danio rerio]
Length = 398
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
SS + CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF
Sbjct: 21 SSQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFF 80
>gi|18858975|ref|NP_571283.1| LIM/homeobox protein Lhx3 [Danio rerio]
gi|2497671|sp|Q90421.1|LHX3_DANRE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|1000342|gb|AAA76714.1| LIM homeobox protein [Danio rerio]
Length = 398
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
SS + CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF
Sbjct: 21 SSQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFF 80
>gi|47219374|emb|CAG01537.1| unnamed protein product [Tetraodon nigroviridis]
Length = 390
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 70/126 (55%), Gaps = 19/126 (15%)
Query: 9 EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCG 68
EKPILD+FLL VL+R WH CV C +C TLS+KCFSREGKL+C+NDFFR RF +
Sbjct: 1 EKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDFFR---RFGT--- 54
Query: 69 VGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS---DKCFSREGKL 124
C GC + IL L+ + +H +C C C+ LS + E K
Sbjct: 55 ---------KCDGCAQGILPSDLVRRAKSKVFHLNCFTCMICNKQLSTGEELYILDEFKF 105
Query: 125 FCRNDF 130
C+ D+
Sbjct: 106 VCKEDY 111
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 83 EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
EKPILD+FLL VL+R WH CV C +C TLS+KCFSREGKL+C+NDFF
Sbjct: 1 EKPILDRFLLKVLDRPWHVKCVHCCECKCTLSEKCFSREGKLYCKNDFF 49
>gi|114627512|ref|XP_001171089.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan troglodytes]
Length = 402
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|171916111|ref|NP_001116445.1| LIM/homeobox protein Lhx4 [Danio rerio]
Length = 391
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+ DFF+
Sbjct: 29 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDFFK-- 86
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + CA C++ I + + + +H C C C L+ D+
Sbjct: 87 -RFGT------------KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEF 133
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 134 YLMEDGRLVCKEDY 147
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+
Sbjct: 23 LGVPLQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKE 82
Query: 129 DFF 131
DFF
Sbjct: 83 DFF 85
>gi|345493999|ref|XP_001603795.2| PREDICTED: LIM/homeobox protein Lhx3-like [Nasonia vitripennis]
Length = 450
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 71/131 (54%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRSPVRF 63
C GC++ ILD+++L V++R WHA C+ C DC L+DKC++R G +FC++DFF+
Sbjct: 55 CGGCQEAILDRYVLRVMDRCWHAGCLTCRDCGVRLTDKCYARNNGHVFCKDDFFKRYGTK 114
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF--S 119
+GCG GL+ S ++ A + T+H C C C L D+ +
Sbjct: 115 CAGCGQGLAPSQVVRRAQ--------------DFTYHLTCFSCAMCSRQLDTGDEFYLMV 160
Query: 120 REGKLFCRNDF 130
+ KL C+ D+
Sbjct: 161 EDAKLVCKPDY 171
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 41/54 (75%), Gaps = 1/54 (1%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFF 131
C GC++ ILD+++L V++R WHA C+ C DC L+DKC++R G +FC++DFF
Sbjct: 55 CGGCQEAILDRYVLRVMDRCWHAGCLTCRDCGVRLTDKCYARNNGHVFCKDDFF 108
>gi|332833327|ref|XP_003312450.1| PREDICTED: LIM/homeobox protein Lhx3 [Pan troglodytes]
Length = 396
Score = 85.5 bits (210), Expect = 6e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 30 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 86
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 87 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 134
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 135 DSRLVCKADY 144
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 30 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 82
>gi|114627514|ref|XP_001171072.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan troglodytes]
Length = 397
Score = 85.5 bits (210), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|114626799|ref|XP_001141606.1| PREDICTED: LIM homeobox transcription factor 1-beta [Pan
troglodytes]
Length = 623
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 277 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 328
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 329 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 381
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 382 GQLLCKGDY 390
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C
Sbjct: 265 CATGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYC 324
Query: 127 RNDF 130
+ D+
Sbjct: 325 KQDY 328
>gi|397492166|ref|XP_003816999.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pan paniscus]
Length = 401
Score = 85.1 bits (209), Expect = 8e-15, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|120537751|gb|AAI29375.1| Lhx4 protein [Danio rerio]
Length = 244
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+ DFF+
Sbjct: 27 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDFFK-- 84
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + CA C++ I + + + +H C C C L+ D+
Sbjct: 85 -RFGT------------KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEF 131
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 132 YLMEDGRLVCKEDY 145
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+
Sbjct: 21 LGVPLQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKE 80
Query: 129 DFF 131
DFF
Sbjct: 81 DFF 83
>gi|259013380|ref|NP_001158395.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
gi|90659991|gb|ABD97272.1| lim domain homeobox 3/4 transcription factor [Saccoglossus
kowalevskii]
Length = 390
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ C+GCE PILD+F+L V +R WH+ C++C DC LSDKC+SR G+++C+ DFF+
Sbjct: 31 QIPKCSGCEHPILDRFILKVQDRAWHSKCLKCTDCQAQLSDKCYSRGGQVYCKEDFFK-- 88
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C+ C++ I + + + +H C C C+ L+ D+
Sbjct: 89 -RFGT------------KCSACDQGIPPTQVVRRAQDNVYHLQCFACVMCNRQLATGDEF 135
Query: 118 F-SREGKLFCRNDF 130
+ + KL C+ D+
Sbjct: 136 YLMNDNKLVCKGDY 149
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
SS + C+GCE PILD+F+L V +R WH+ C++C DC LSDKC+SR G+++C+ DFF
Sbjct: 29 SSQIPKCSGCEHPILDRFILKVQDRAWHSKCLKCTDCQAQLSDKCYSRGGQVYCKEDFF 87
>gi|211971017|ref|NP_001130018.1| LIM/homeobox protein Lhx3 [Salmo salar]
gi|157412002|gb|ABV54627.1| Lim homeobox protein 3 [Salmo salar]
Length = 395
Score = 85.1 bits (209), Expect = 9e-15, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFSR 120
+ CA C++ I + + + +H C C C L+ +
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKEDFF 80
>gi|47218680|emb|CAG12404.1| unnamed protein product [Tetraodon nigroviridis]
Length = 444
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VLER WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 5 CAGCNQHIVDRFILKVLERHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFK---RFG 61
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFSR 120
+ CA C++ I + + + +H C C C L+ +
Sbjct: 62 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 109
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 110 DSRLVCKTDY 119
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 28/53 (52%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VLER WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 5 CAGCNQHIVDRFILKVLERHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFF 57
>gi|109109779|ref|XP_001096188.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Macaca mulatta]
Length = 402
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|118343872|ref|NP_001071755.1| LIM/homeobox protein Lhx3a type 1 [Ciona intestinalis]
gi|70570105|dbj|BAE06537.1| transcription factor protein [Ciona intestinalis]
Length = 596
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC+ I D+++L V ++ WH+ C++C DC L+DKCFSR ++C+ DFF+ RF
Sbjct: 195 CTGCDHHIFDRYILKVQDKPWHSQCLKCNDCGRQLTDKCFSRGSYVYCKEDFFK---RFG 251
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF-SR 120
+ C+GCE I + + + +H +C RC+ C L D+ +
Sbjct: 252 T------------KCSGCELAIPPTQVVRRAQDNVYHLECFRCFMCSEQLGTGDQFYLLD 299
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 300 DSRLVCKKDY 309
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 24/53 (45%), Positives = 37/53 (69%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC+ I D+++L V ++ WH+ C++C DC L+DKCFSR ++C+ DFF
Sbjct: 195 CTGCDHHIFDRYILKVQDKPWHSQCLKCNDCGRQLTDKCFSRGSYVYCKEDFF 247
>gi|84490413|ref|NP_001033709.1| LIM/homeobox protein Lhx3 [Bos taurus]
gi|62952823|gb|AAY23167.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|62952825|gb|AAY23168.1| LIM homeodomain 3 protein b isoform [Bos taurus]
gi|296482071|tpg|DAA24186.1| TPA: LIM homeobox protein 3 [Bos taurus]
Length = 403
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 88
>gi|109109777|ref|XP_001096075.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Macaca mulatta]
Length = 397
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|327277087|ref|XP_003223297.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Anolis
carolinensis]
Length = 381
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/129 (35%), Positives = 68/129 (52%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC PI D+FLL V ER+WH CV+C C LS C+ R +L+C++D+ +
Sbjct: 41 CAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCRNRQLYCKHDYEK------ 94
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C+GC K + +F++ VLE +H C C +C L D+ +E
Sbjct: 95 ---------LFQTKCSGCLKAVAPSEFIMRVLENVYHVHCFSCCECERRLQRGDEFVLKE 145
Query: 122 GKLFCRNDF 130
G+L CR+D+
Sbjct: 146 GQLLCRSDY 154
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G G S M CAGC PI D+FLL V ER+WH CV+C C LS C+ R +L+C+
Sbjct: 30 GYGSESKMREVCAGCNTPISDRFLLRVNERSWHEGCVKCAACLQPLSGTCYCRNRQLYCK 89
Query: 128 NDF 130
+D+
Sbjct: 90 HDY 92
>gi|395530909|ref|XP_003767529.1| PREDICTED: uncharacterized protein LOC100914829 [Sarcophilus
harrisii]
Length = 659
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 57
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 40 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFF 92
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 30/53 (56%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 40 CAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFF 92
>gi|308235933|ref|NP_001184116.1| LIM/homeobox protein Lhx3 [Canis lupus familiaris]
gi|300837161|gb|ADK38612.1| LIM homeodomain protein 3 isoform LHX3b [Canis lupus familiaris]
Length = 403
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFF 88
>gi|326923371|ref|XP_003207910.1| PREDICTED: LIM/homeobox protein Lhx3-like [Meleagris gallopavo]
Length = 399
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 32 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 88
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 89 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 136
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 137 DSRLVCKADY 146
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 44/62 (70%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
GL + + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ D
Sbjct: 23 GLLPAEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKED 82
Query: 130 FF 131
FF
Sbjct: 83 FF 84
>gi|402896087|ref|XP_003911139.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Papio anubis]
Length = 402
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|395844276|ref|XP_003794888.1| PREDICTED: LIM/homeobox protein Lhx3 [Otolemur garnettii]
Length = 402
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 88
>gi|340377757|ref|XP_003387395.1| PREDICTED: LIM/homeobox protein Lhx5-like [Amphimedon
queenslandica]
Length = 272
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 70/124 (56%), Gaps = 18/124 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC +PI+++FL+ VL+++WH CV+C DC LS+KCFSR+ KL+CR+DFFR
Sbjct: 6 CAGCSEPIMERFLMKVLDKSWHVQCVKCSDCQCLLSEKCFSRDNKLYCRSDFFR------ 59
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CA C++ + + + + + +H C +C C L+ ++ + +
Sbjct: 60 ---------QYGTQCASCKEGLCPEDLVRRGVNKIYHVQCFKCSVCQRQLNTGEQLYLVQ 110
Query: 122 GKLF 125
G+ F
Sbjct: 111 GEKF 114
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/53 (58%), Positives = 44/53 (83%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC +PI+++FL+ VL+++WH CV+C DC LS+KCFSR+ KL+CR+DFF
Sbjct: 6 CAGCSEPIMERFLMKVLDKSWHVQCVKCSDCQCLLSEKCFSRDNKLYCRSDFF 58
>gi|171544941|ref|NP_001116387.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
gi|157410515|gb|ABV53980.1| LIM/homeobox protein Lhx3 [Oryzias latipes]
Length = 401
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH C++C DC L++KCFSR ++C++DFF+ RF
Sbjct: 30 CAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQAQLAEKCFSRGDSVYCKDDFFKR--RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKTDY 145
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/70 (44%), Positives = 47/70 (67%), Gaps = 5/70 (7%)
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
R+ SG S+ + CAGC + I+D+F+L VL+R WH C++C DC L++KCFSR
Sbjct: 18 RYSSG-----QSAEIPVCAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQAQLAEKCFSRG 72
Query: 122 GKLFCRNDFF 131
++C++DFF
Sbjct: 73 DSVYCKDDFF 82
>gi|348535047|ref|XP_003455013.1| PREDICTED: LIM/homeobox protein Lhx3-like [Oreochromis niloticus]
Length = 400
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 69/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCF+R ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLADKCFTRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS---DKCFSR 120
+ CA C++ I + + + +H C C C L+ +
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCF+R ++C++DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLADKCFTRGDSVYCKDDFF 80
>gi|7657303|ref|NP_055379.1| LIM/homeobox protein Lhx3 isoform b [Homo sapiens]
gi|7110145|gb|AAF36809.1|AF156889_1 LIM homeobox protein 3 isoform b [Homo sapiens]
gi|119608611|gb|EAW88205.1| LIM homeobox 3, isoform CRA_a [Homo sapiens]
gi|157169604|gb|AAI52819.1| LIM homeobox 3 [synthetic construct]
gi|162318656|gb|AAI56736.1| LIM homeobox 3 [synthetic construct]
gi|307685965|dbj|BAJ20913.1| LIM homeobox 3 [synthetic construct]
gi|326205262|dbj|BAJ84013.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 402
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|30023847|ref|NP_835258.1| LIM/homeobox protein Lhx3 isoform a [Homo sapiens]
gi|12643415|sp|Q9UBR4.2|LHX3_HUMAN RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3
gi|7110143|gb|AAF36808.1|AF156888_1 LIM homeobox protein 3 isoform a [Homo sapiens]
gi|16565927|gb|AAL26314.1| LIM homeobox protein 3 [Homo sapiens]
gi|119608612|gb|EAW88206.1| LIM homeobox 3, isoform CRA_b [Homo sapiens]
gi|326205254|dbj|BAJ84009.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205256|dbj|BAJ84010.1| LIM/homeobox protein Lhx3 [Homo sapiens]
gi|326205264|dbj|BAJ84014.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 397
Score = 84.3 bits (207), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|402896085|ref|XP_003911138.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Papio anubis]
Length = 397
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|297685716|ref|XP_002820429.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Pongo abelii]
Length = 402
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|296191167|ref|XP_002743507.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Callithrix jacchus]
Length = 402
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|194226030|ref|XP_001918019.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Equus
caballus]
Length = 401
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 86
>gi|126302627|ref|XP_001366305.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Monodelphis
domestica]
Length = 403
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFF 88
>gi|403301480|ref|XP_003941417.1| PREDICTED: LIM/homeobox protein Lhx3 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|395506420|ref|XP_003757530.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Sarcophilus
harrisii]
Length = 403
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 75.1 bits (183), Expect = 7e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 36 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFF 88
>gi|296191169|ref|XP_002743508.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Callithrix jacchus]
Length = 397
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 83
>gi|148232304|ref|NP_001081623.1| LIM/homeobox protein Lhx3 [Xenopus laevis]
gi|547856|sp|P36200.1|LHX3_XENLA RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; Short=xLIM-3
gi|407072|emb|CAA80402.1| Xlim-3 [Xenopus laevis]
gi|213623314|gb|AAI69580.1| Xlim-3 protein [Xenopus laevis]
Length = 395
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + E +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C++DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYCKDDFF 80
>gi|390458375|ref|XP_002743346.2| PREDICTED: LIM homeobox transcription factor 1-beta [Callithrix
jacchus]
Length = 638
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 292 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 343
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 344 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 396
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 397 GQLLCKGDY 405
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C
Sbjct: 280 CAAGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYC 339
Query: 127 RNDF 130
+ D+
Sbjct: 340 KQDY 343
>gi|126302625|ref|XP_001366249.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Monodelphis
domestica]
Length = 401
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G + + + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C
Sbjct: 23 CAFGETQEIPL-CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYC 81
Query: 127 RNDFF 131
+ DFF
Sbjct: 82 KEDFF 86
>gi|345326124|ref|XP_001508297.2| PREDICTED: hypothetical protein LOC100077000 [Ornithorhynchus
anatinus]
Length = 553
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FLL V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 209 CEGCQRPISDRFLLRVNEASWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 260
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 261 -------QQLFAAKCSGCLEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 313
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 314 GQLLCKSDY 322
>gi|354497582|ref|XP_003510898.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Cricetulus griseus]
gi|344256661|gb|EGW12765.1| LIM/homeobox protein Lhx3 [Cricetulus griseus]
Length = 403
Score = 83.6 bits (205), Expect = 2e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFF 88
>gi|395506422|ref|XP_003757531.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Sarcophilus
harrisii]
Length = 401
Score = 83.6 bits (205), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 34 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYCKEDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFSCVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G + + + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C
Sbjct: 23 CAFGETQEIPL-CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTPLAEKCFSRGDGVYC 81
Query: 127 RNDFF 131
+ DFF
Sbjct: 82 KEDFF 86
>gi|293345787|ref|XP_001078243.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|293357700|ref|XP_001059910.2| PREDICTED: LIM/homeobox protein Lhx3 isoform 1 [Rattus norvegicus]
gi|149039302|gb|EDL93522.1| rCG45383, isoform CRA_b [Rattus norvegicus]
Length = 402
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 88
>gi|148676345|gb|EDL08292.1| mCG18748, isoform CRA_b [Mus musculus]
Length = 402
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 88
>gi|307174398|gb|EFN64917.1| LIM/homeobox protein Lhx3 [Camponotus floridanus]
Length = 467
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 84 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFK--- 140
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
RF + GCG GL+ S ++ A E +H C C C L D+
Sbjct: 141 RFGTKCAGCGQGLAPSQVVRRA--------------QELVYHLTCFSCALCSRQLDTGDE 186
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 187 FYLMEDRKLVCKPDY 201
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 84 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 139
>gi|89001116|ref|NP_001034742.1| LIM/homeobox protein Lhx3 [Mus musculus]
gi|598327|gb|AAB64178.1| homeodomain protein [Mus musculus]
gi|124375774|gb|AAI32557.1| LIM homeobox protein 3 [Mus musculus]
gi|124376794|gb|AAI32555.1| LIM homeobox protein 3 [Mus musculus]
Length = 402
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 88
>gi|410903462|ref|XP_003965212.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 2 [Takifugu
rubripes]
Length = 406
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 35 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFK---RFG 91
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 92 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 139
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 140 DSRLVCKTDY 149
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 32/70 (45%), Positives = 48/70 (68%)
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
R+ SG LS + + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR
Sbjct: 18 RYNSGQVGLLSPAEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRG 77
Query: 122 GKLFCRNDFF 131
++C+ DFF
Sbjct: 78 DSVYCKEDFF 87
>gi|443694942|gb|ELT95960.1| hypothetical protein CAPTEDRAFT_39289, partial [Capitella teleta]
Length = 118
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 69/128 (53%), Gaps = 13/128 (10%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
+C GC + I D+FLL R+WH +C+ C C L+ CF+++G+L C+ D+ R
Sbjct: 2 ACFGCGQAIADRFLLKAAGRSWHEECLSCNACGVQLTSSCFAKDGRLLCKADYARLYSVR 61
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
SGCG ++ L+ +G +V R +HA C C C H LS D+ + R+
Sbjct: 62 CSGCGQAVTGGQLVMRSG-----------DVGGRVYHASCFCCIACGHQLSKGDQYYIRD 110
Query: 122 GKLFCRND 129
G+LFC+ D
Sbjct: 111 GRLFCQLD 118
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
+C GC + I D+FLL R+WH +C+ C C L+ CF+++G+L C+ D+
Sbjct: 2 ACFGCGQAIADRFLLKAAGRSWHEECLSCNACGVQLTSSCFAKDGRLLCKADY 54
>gi|410903460|ref|XP_003965211.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 1 [Takifugu
rubripes]
Length = 399
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKTDY 142
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFF 80
>gi|47225657|emb|CAG08000.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/133 (36%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+DKCFSR G ++C+ DFF+
Sbjct: 2 IPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK--- 58
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + CA C+K I + + + +H C C C L+ D+ +
Sbjct: 59 RFGT------------KCASCQKGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEFY 106
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 107 LMEDGRLVCKVDY 119
Score = 76.3 bits (186), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+DKCFSR G ++C+ DFF
Sbjct: 2 IPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFF 57
>gi|332018435|gb|EGI59029.1| LIM/homeobox protein Lhx3 [Acromyrmex echinatior]
Length = 467
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 73/135 (54%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 84 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFK--- 140
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
RF + GCG GL+ S ++ A E +H C C C L D+
Sbjct: 141 RFGTKCAGCGQGLAPSQVVRRA--------------QEFVYHLTCFSCALCSRQLDTGDE 186
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 187 FYLMEDRKLVCKPDY 201
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 82 STIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 139
>gi|443711321|gb|ELU05149.1| hypothetical protein CAPTEDRAFT_228137 [Capitella teleta]
Length = 506
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 71/133 (53%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC ILD+F+L VL+R+WH+ C+ C DC+ LSDKCFS+ K++C+ DFFR
Sbjct: 141 IPKCAGCGDAILDRFILKVLDRSWHSKCLMCADCNGHLSDKCFSKGDKVYCKEDFFR--- 197
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLSDK---C 117
RF + CAGCE+ I + + + +H +C C C L+
Sbjct: 198 RFGT------------KCAGCEQGIPPTQVVRRAQDNVYHLECFACSMCSQQLNTGDEFY 245
Query: 118 FSREGKLFCRNDF 130
+ KL C+ D+
Sbjct: 246 LMDDKKLVCKGDY 258
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + CAGC ILD+F+L VL+R+WH+ C+ C DC+ LSDKCFS+ K++C+ DFF
Sbjct: 139 AAIPKCAGCGDAILDRFILKVLDRSWHSKCLMCADCNGHLSDKCFSKGDKVYCKEDFF 196
>gi|72535130|ref|NP_001025506.1| LIM/homeobox protein Lhx3 [Gallus gallus]
gi|1708828|sp|P53412.1|LHX3_CHICK RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3
gi|531185|gb|AAA62174.1| amino acid feature: LIM1, bp 82 .. 225; amino acid feature: LIM2,
bp 259 .. 414; amino acid feature: homeodomain, bp 457
.. 636 [Gallus gallus]
Length = 395
Score = 82.8 bits (203), Expect = 4e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 80
>gi|322793254|gb|EFZ16911.1| hypothetical protein SINV_14186 [Solenopsis invicta]
Length = 392
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 73/136 (53%), Gaps = 23/136 (16%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF+
Sbjct: 2 TIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFFK-- 59
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
RF + GCG GL+ S ++ A E +H C C C L D
Sbjct: 60 -RFGTKCAGCGQGLAPSQVVRRA--------------QEFVYHLTCFSCALCSRQLDTGD 104
Query: 116 KCFSREG-KLFCRNDF 130
+ + E KL C+ D+
Sbjct: 105 EFYLMEDRKLVCKPDY 120
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FC++DFF
Sbjct: 1 ATIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCKDDFF 58
>gi|307200797|gb|EFN80850.1| LIM/homeobox protein Lhx3 [Harpegnathos saltator]
Length = 421
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FCR DFF+
Sbjct: 85 IPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCREDFFK--- 141
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
RF + GC GLS S ++ A E +H C C C L D+
Sbjct: 142 RFGTKCAGCSQGLSPSQVVRRA--------------QELVYHLTCFSCALCSRQLDTGDE 187
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 188 FYLMEDRKLVCKPDY 202
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 42/58 (72%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC++ ILDK++L VLER WHA C+ C DC L+DKCF+R G +FCR DFF
Sbjct: 83 SSIPKCGGCQEVILDKYVLRVLERCWHARCLTCRDCGARLTDKCFARNGHVFCREDFF 140
>gi|354497584|ref|XP_003510899.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Cricetulus griseus]
Length = 401
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHIPLAERCFSRGESVYCKDDFF 86
>gi|293345789|ref|XP_002726117.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|293357702|ref|XP_002729190.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Rattus norvegicus]
gi|149039301|gb|EDL93521.1| rCG45383, isoform CRA_a [Rattus norvegicus]
Length = 400
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 86
>gi|432856246|ref|XP_004068425.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oryzias latipes]
Length = 389
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+DKCFSR G ++C+ DFF+
Sbjct: 27 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK-- 84
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + CA C++ I + + + +H C C C L+ D+
Sbjct: 85 -RFGT------------KCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEF 131
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 132 YLMEDGRLVCKVDY 145
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 58 RSPVR-FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
SPV+ P GV L + CAGC + ILDKF+L VL+R WH+ C++C DC L+DK
Sbjct: 11 ESPVKSLPEILGVPLQ--QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK 68
Query: 117 CFSREGKLFCRNDFF 131
CFSR G ++C+ DFF
Sbjct: 69 CFSRAGSVYCKEDFF 83
>gi|345805844|ref|XP_003435360.1| PREDICTED: LIM homeobox transcription factor 1-beta [Canis lupus
familiaris]
Length = 487
Score = 82.4 bits (202), Expect = 5e-14, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 141 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 192
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 193 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 245
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 246 GQLLCKGDY 254
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 38/64 (59%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C G C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C
Sbjct: 129 CAAGSDCPHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYC 188
Query: 127 RNDF 130
+ D+
Sbjct: 189 KQDY 192
>gi|410921498|ref|XP_003974220.1| PREDICTED: LIM/homeobox protein Lhx4-like [Takifugu rubripes]
Length = 389
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+DKCFSR G ++C+ DFF+
Sbjct: 27 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK-- 84
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + CA C++ I + + + +H C C C L+ D+
Sbjct: 85 -RFGT------------KCASCQQGIPPMQVVRKAQDFVYHLHCFACIMCSRQLATGDEF 131
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 132 YLMEDGRLVCKVDY 145
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 58 RSPVR-FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
SPV+ P GV L + CAGC + ILDKF+L VL+R WH+ C++C DC L+DK
Sbjct: 11 ESPVKSLPEILGVPLQ--QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK 68
Query: 117 CFSREGKLFCRNDFF 131
CFSR G ++C+ DFF
Sbjct: 69 CFSRAGSVYCKEDFF 83
>gi|348504454|ref|XP_003439776.1| PREDICTED: LIM/homeobox protein Lhx4-like [Oreochromis niloticus]
Length = 387
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/134 (35%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+DKCFSR G ++C+ DFF+
Sbjct: 27 QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADKCFSRAGSVYCKEDFFK-- 84
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + CA C++ I + + + +H C C C L+ D+
Sbjct: 85 -RFGT------------KCASCQQGIPPTQVVRKAQDFVYHLHCFACIMCSRQLATGDEF 131
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 132 YLMEDGRLVCKVDY 145
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 50/75 (66%), Gaps = 3/75 (4%)
Query: 58 RSPVR-FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
SPV+ P GV L + CAGC + ILDKF+L VL+R WH+ C++C DC L+DK
Sbjct: 11 ESPVKSLPEILGVPLQ--QIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCQTPLADK 68
Query: 117 CFSREGKLFCRNDFF 131
CFSR G ++C+ DFF
Sbjct: 69 CFSRAGSVYCKEDFF 83
>gi|780314|gb|AAA73902.1| PLim [Mus musculus]
Length = 400
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRRESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRRESVYCKDDFF 86
>gi|301608740|ref|XP_002933954.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Xenopus
(Silurana) tropicalis]
Length = 533
Score = 82.4 bits (202), Expect = 6e-14, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC I D+FLL V +R+WH CV+C C LS C+ R +L+C+ D+
Sbjct: 186 CAGCGNTISDRFLLRVNDRSWHECCVKCAACLQILSGTCYYRNRQLYCKEDY-------- 237
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C C K +L + ++ VL +H C C +C L D+ +E
Sbjct: 238 -------DKLFATKCNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKE 290
Query: 122 GKLFCRNDF 130
G+L CR+D+
Sbjct: 291 GQLLCRSDY 299
Score = 38.9 bits (89), Expect = 0.60, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 5 CAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFFR 58
C C K +L + ++ VL +H C C +C L D+ +EG+L CR+D+ R
Sbjct: 245 CNSCLKTVLPSELIMRVLSNVYHVACFFCCECERRLERGDEFVLKEGQLLCRSDYER 301
>gi|339961229|pdb|3MMK|A Chain A, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
gi|339961230|pdb|3MMK|B Chain B, The Structural Basis For Partial Redundancy In A Class Of
Transcription Factors, The Lim-Homeodomain Proteins, In
Neural Cell Type Specification
Length = 169
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 5 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 62
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 63 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 109
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 110 YLMEDGRLVCKEDY 123
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 43/60 (71%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 SMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 61
>gi|402897927|ref|XP_003911988.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Papio anubis]
Length = 406
Score = 82.0 bits (201), Expect = 6e-14, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|148676344|gb|EDL08291.1| mCG18748, isoform CRA_a [Mus musculus]
Length = 400
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 86
>gi|335295820|ref|XP_003357609.1| PREDICTED: LIM/homeobox protein Lhx4-like [Sus scrofa]
Length = 390
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|301770851|ref|XP_002920842.1| PREDICTED: LIM/homeobox protein Lhx4-like [Ailuropoda melanoleuca]
Length = 390
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|1708829|sp|P50481.1|LHX3_MOUSE RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox protein
3; AltName: Full=Homeobox protein LIM-3; AltName:
Full=Homeobox protein P-LIM
gi|575517|gb|AAA62369.1| LIM-homeoprotein [Mus musculus]
gi|187956241|gb|AAI50690.1| Lhx3 protein [Mus musculus]
Length = 400
Score = 82.0 bits (201), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 75.9 bits (185), Expect = 4e-12, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 86
>gi|18026224|gb|AAL07260.1| LIM homeodomain protein [Homo sapiens]
Length = 390
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|119611484|gb|EAW91078.1| LIM homeobox 4 [Homo sapiens]
Length = 390
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|402857943|ref|XP_003893495.1| PREDICTED: LIM/homeobox protein Lhx4 [Papio anubis]
gi|355558975|gb|EHH15755.1| hypothetical protein EGK_01889 [Macaca mulatta]
Length = 390
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|410986072|ref|XP_003999336.1| PREDICTED: LIM/homeobox protein Lhx4 [Felis catus]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|29437129|gb|AAH49834.1| Lhx4 protein [Mus musculus]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|426239972|ref|XP_004013890.1| PREDICTED: LIM/homeobox protein Lhx4 [Ovis aries]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|73960401|ref|XP_547420.2| PREDICTED: LIM/homeobox protein Lhx4 isoform 1 [Canis lupus
familiaris]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|15375314|ref|NP_203129.1| LIM/homeobox protein Lhx4 [Homo sapiens]
gi|209572644|sp|Q969G2.2|LHX4_HUMAN RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|14599448|gb|AAK70923.1|AF179849_1 LIM homeobox protein 4 [Homo sapiens]
gi|22094433|gb|AAM91896.1|AF405430_1 LIM homeobox protein 4 [Homo sapiens]
gi|15079940|gb|AAH11759.1| LIM homeobox 4 [Homo sapiens]
gi|123988108|gb|ABM83830.1| LIM homeobox 4 [synthetic construct]
gi|123999145|gb|ABM87154.1| LIM homeobox 4 [synthetic construct]
gi|261861646|dbj|BAI47345.1| LIM homeobox 4 [synthetic construct]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|194210370|ref|XP_001914860.1| PREDICTED: LIM/homeobox protein Lhx4-like [Equus caballus]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|190684642|ref|NP_034842.2| LIM/homeobox protein Lhx4 [Mus musculus]
gi|209572773|sp|P53776.4|LHX4_MOUSE RecName: Full=LIM/homeobox protein Lhx4; Short=LIM homeobox protein
4
gi|148707456|gb|EDL39403.1| LIM homeobox protein 4, isoform CRA_b [Mus musculus]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|426332930|ref|XP_004028045.1| PREDICTED: LIM/homeobox protein Lhx4 [Gorilla gorilla gorilla]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|395824959|ref|XP_003785717.1| PREDICTED: LIM/homeobox protein Lhx4 [Otolemur garnettii]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACVICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|351699208|gb|EHB02127.1| LIM/homeobox protein Lhx4 [Heterocephalus glaber]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|300795912|ref|NP_001179714.1| LIM/homeobox protein Lhx4 [Bos taurus]
gi|296479119|tpg|DAA21234.1| TPA: LIM homeobox 4 [Bos taurus]
gi|440901216|gb|ELR52198.1| LIM/homeobox protein Lhx4 [Bos grunniens mutus]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|297662584|ref|XP_002809779.1| PREDICTED: LIM/homeobox protein Lhx4 [Pongo abelii]
Length = 390
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|270007707|gb|EFA04155.1| hypothetical protein TcasGA2_TC014400 [Tribolium castaneum]
Length = 415
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L V +RTWHA C++C DC L+DKCF+R G+LFC+ DFF+
Sbjct: 65 IPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFFK--- 121
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
RF + GC +G+ + ++ A + +H C C C L+ D+
Sbjct: 122 RFGTKCAGCDLGIPPTQVVRRA--------------QDNVYHLQCFSCVMCARQLNTGDE 167
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 168 FYLMEDRKLVCKPDY 182
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 43/58 (74%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C DC L+DKCF+R G+LFC+ DFF
Sbjct: 63 STIPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFF 120
>gi|432115998|gb|ELK37137.1| LIM/homeobox protein Lhx4 [Myotis davidii]
Length = 389
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 25 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 82
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 83 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 129
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 130 YLMEDGRLVCKEDY 143
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 19 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 78
Query: 129 DFF 131
DFF
Sbjct: 79 DFF 81
>gi|426222898|ref|XP_004005617.1| PREDICTED: LIM/homeobox protein Lhx3 [Ovis aries]
Length = 401
Score = 81.6 bits (200), Expect = 8e-14, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 68/129 (52%), Gaps = 19/129 (14%)
Query: 6 AGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPS 65
AGC +PILD+F L L R WH+ C++C DCH L+++CFSR ++C++DFF+ RF +
Sbjct: 35 AGCAQPILDRFTLKALGRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFK---RFGT 91
Query: 66 GCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 92 ------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLMED 139
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 140 SRLVCKADY 148
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 39/52 (75%)
Query: 80 AGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
AGC +PILD+F L L R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 35 AGCAQPILDRFTLKALGRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 86
>gi|348578364|ref|XP_003474953.1| PREDICTED: LIM/homeobox protein Lhx4 [Cavia porcellus]
Length = 390
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|344278250|ref|XP_003410909.1| PREDICTED: LIM/homeobox protein Lhx4-like [Loxodonta africana]
Length = 390
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 2/74 (2%)
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC 117
R+ R P GV + + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+C
Sbjct: 11 RAVKRLPEMLGVPMQ--QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRC 68
Query: 118 FSREGKLFCRNDFF 131
FSR G ++C+ DFF
Sbjct: 69 FSRAGSVYCKEDFF 82
>gi|4809173|gb|AAD30125.1|AF135415_1 LIM-homeobox protein [Mus musculus]
Length = 367
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 3 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 61 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 107
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 108 YLMEDGRLVCKEDY 121
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 QQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 59
>gi|189237525|ref|XP_973330.2| PREDICTED: similar to lim homeobox protein [Tribolium castaneum]
Length = 448
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 73/135 (54%), Gaps = 23/135 (17%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L V +RTWHA C++C DC L+DKCF+R G+LFC+ DFF+
Sbjct: 98 IPKCGGCHELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFFK--- 154
Query: 62 RFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
RF + GC +G+ + ++ A + +H C C C L+ D+
Sbjct: 155 RFGTKCAGCDLGIPPTQVVRRA--------------QDNVYHLQCFSCVMCARQLNTGDE 200
Query: 117 CFSREG-KLFCRNDF 130
+ E KL C+ D+
Sbjct: 201 FYLMEDRKLVCKPDY 215
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 63/108 (58%), Gaps = 5/108 (4%)
Query: 25 WHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR-SPVRFPSGCGVGLSSSMLISCAGCE 83
W +D +R Y + +C E ++ + +R P+ V LS+ + C GC
Sbjct: 50 WGSDEIRGYANLFEMISQC--NEDRVGLDIEMYRVPPISIDDIPQVLLST--IPKCGGCH 105
Query: 84 KPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ ILD+F+L V +RTWHA C++C DC L+DKCF+R G+LFC+ DFF
Sbjct: 106 ELILDRFILKVADRTWHAKCLQCSDCRIQLTDKCFARNGQLFCKEDFF 153
>gi|14579221|gb|AAK69169.1|AF282899_1 LIM homeobox protein [Homo sapiens]
gi|15146348|dbj|BAB62817.1| LIM homeobox 4 [Homo sapiens]
Length = 367
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 3 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 61 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 107
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 108 YLMEDGRLVCKEDY 121
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 QQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 59
>gi|351707222|gb|EHB10141.1| LIM homeobox transcription factor 1-beta [Heterocephalus glaber]
Length = 395
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|332230039|ref|XP_003264194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Nomascus leucogenys]
Length = 408
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 64 PSGCGVGLSS--SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
P+ GV L S S C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+
Sbjct: 39 PATLGVLLGSDCSHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRD 98
Query: 122 GKLFCRNDF 130
KL+C+ D+
Sbjct: 99 RKLYCKQDY 107
>gi|281354363|gb|EFB29947.1| hypothetical protein PANDA_009642 [Ailuropoda melanoleuca]
Length = 365
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 2 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK--- 58
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C+ L+ D+ +
Sbjct: 59 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFSCVICNRQLATGDEFY 106
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 107 LMEDGRLVCKEDY 119
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 57
>gi|371573884|gb|AEX38312.1| Lhx1 [Mnemiopsis leidyi]
Length = 424
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGC I DKFL+ VL++TWH++C+ C DC L+D+CF+R GK +C DF +S
Sbjct: 1 MVSFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQCFTRNGKFYCSKDFEKSQ 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERT--WHADCVRCYDCHHTLS--D 115
SC C+K I D +L +H C C C L +
Sbjct: 61 AS---------------SCGACKKDITPDDMILKPPNTVGMFHVKCFTCSKCSRQLEAGE 105
Query: 116 KCFSREGKLF-CRNDF 130
+ ++ + K F C DF
Sbjct: 106 EFYTIDNKKFLCSRDF 121
>gi|334321803|ref|XP_001374523.2| PREDICTED: LIM/homeobox protein Lhx4-like [Monodelphis domestica]
Length = 391
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 28 IPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFFK--- 84
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C+ L+ D+ +
Sbjct: 85 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFY 132
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 133 LMEDGRLVCKEDY 145
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 44/60 (73%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+SS + CAGC + ILDKF+L VL+R WH C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 24 ASSEIPQCAGCNQHILDKFILKVLDRHWHGSCLKCADCQMQLADRCFSRAGSVYCKEDFF 83
>gi|348508944|ref|XP_003442012.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 368
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE PI D+FLL V ER+WH CV+C C L+ C+SR+ L+C++D+ + VR
Sbjct: 31 CAGCESPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYSRDRLLYCKHDYEKLFVRKC 90
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
S C + S LI + VL + +H C C +C L D+ +EG
Sbjct: 91 SACLQVIGRSELI--------------MRVLGQVYHLGCFSCCECERRLQRGDEFVLKEG 136
Query: 123 KLFCRNDF 130
+L CR D+
Sbjct: 137 QLLCRMDY 144
>gi|397473155|ref|XP_003808084.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta [Pan paniscus]
Length = 402
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CXGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|355746127|gb|EHH50752.1| hypothetical protein EGM_01626, partial [Macaca fascicularis]
Length = 364
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 1 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C+ L+ D+ +
Sbjct: 58 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFY 105
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 106 LMEDGRLVCKEDY 118
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 1 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 56
>gi|148227168|ref|NP_001083902.1| LIM homeobox transcription factor 1-beta.1 [Xenopus laevis]
gi|82216057|sp|Q8UVR3.1|LMX1B_XENLA RecName: Full=LIM homeobox transcription factor 1-beta.1; AltName:
Full=LIM homeobox protein 1b; Short=Xlmx1b
gi|16974694|gb|AAL32444.1|AF414086_1 LIM homeobox protein 1b [Xenopus laevis]
Length = 400
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KLFC+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|332230041|ref|XP_003264195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Nomascus leucogenys]
Length = 401
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 64 PSGCGVGLSS--SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
P+ GV L S S C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+
Sbjct: 39 PATLGVLLGSDCSHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRD 98
Query: 122 GKLFCRNDF 130
KL+C+ D+
Sbjct: 99 RKLYCKQDY 107
>gi|292494915|ref|NP_001167618.1| LIM homeobox transcription factor 1-beta isoform 2 [Homo sapiens]
gi|301761896|ref|XP_002916366.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 1
[Ailuropoda melanoleuca]
gi|344271902|ref|XP_003407776.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Loxodonta africana]
gi|410979112|ref|XP_003995930.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Felis catus]
gi|281340079|gb|EFB15663.1| hypothetical protein PANDA_004429 [Ailuropoda melanoleuca]
Length = 402
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|291237424|ref|XP_002738638.1| PREDICTED: Lim homeobox transcription factor [Saccoglossus
kowalevskii]
Length = 441
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 67/128 (52%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++PI D+FL+ V+E +WH C++C C LS C+ ++ KL+C+ D+ +
Sbjct: 41 CAGCQQPIEDRFLMRVMENSWHEQCLQCSVCQSPLSRSCYFKDRKLYCKGDYEKLFGTKC 100
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
+GC ++S+ L+ A C +H C C C+ L D+ R+
Sbjct: 101 NGCLQSITSNELVMRALCN--------------VYHLRCFNCIICNQRLQKGDEFVVRDN 146
Query: 123 KLFCRNDF 130
+LFC+ D+
Sbjct: 147 QLFCKVDY 154
>gi|149058349|gb|EDM09506.1| LIM homeobox protein 4 (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 376
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 13 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK--- 69
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C+ L+ D+ +
Sbjct: 70 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFY 117
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 118 LMEDGRLVCKEDY 130
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+S + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 10 TSEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 68
>gi|296229653|ref|XP_002760359.1| PREDICTED: LIM/homeobox protein Lhx4 [Callithrix jacchus]
Length = 390
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|403266388|ref|XP_003925368.1| PREDICTED: LIM/homeobox protein Lhx4 [Saimiri boliviensis
boliviensis]
Length = 390
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICTRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|417410392|gb|JAA51670.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 398
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 52 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 103
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 104 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 156
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 157 GQLLCKGDY 165
>gi|410979116|ref|XP_003995932.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Felis catus]
Length = 406
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|332230043|ref|XP_003264196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Nomascus leucogenys]
Length = 416
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/69 (40%), Positives = 43/69 (62%), Gaps = 2/69 (2%)
Query: 64 PSGCGVGLSS--SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
P+ GV L S S C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+
Sbjct: 39 PATLGVLLGSDCSHPAVCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRD 98
Query: 122 GKLFCRNDF 130
KL+C+ D+
Sbjct: 99 RKLYCKQDY 107
>gi|301761900|ref|XP_002916368.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 3
[Ailuropoda melanoleuca]
Length = 406
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|293345851|ref|XP_001078699.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Rattus norvegicus]
gi|293357761|ref|XP_001069713.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Rattus norvegicus]
Length = 395
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|292494913|ref|NP_001167617.1| LIM homeobox transcription factor 1-beta isoform 3 [Homo sapiens]
Length = 406
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|292494911|ref|NP_002307.2| LIM homeobox transcription factor 1-beta isoform 1 [Homo sapiens]
gi|301761898|ref|XP_002916367.1| PREDICTED: LIM homeobox transcription factor 1-beta-like isoform 2
[Ailuropoda melanoleuca]
gi|344271898|ref|XP_003407774.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Loxodonta africana]
gi|306921455|dbj|BAJ17807.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|387541732|gb|AFJ71493.1| LIM homeobox transcription factor 1-beta isoform 1 [Macaca mulatta]
Length = 395
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|432874756|ref|XP_004072577.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Oryzias
latipes]
Length = 398
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V + +WH +C++C C L+ C+ RE KL+C++D+
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCAVCQQPLTTSCYLRERKLYCKHDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ +E
Sbjct: 108 -------QQLFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKVDY 169
>gi|354475897|ref|XP_003500163.1| PREDICTED: LIM/homeobox protein Lhx4 [Cricetulus griseus]
Length = 390
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L D+CFSR G ++C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 44/63 (69%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLVDRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>gi|344271900|ref|XP_003407775.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Loxodonta africana]
Length = 406
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|268567057|ref|XP_002639879.1| C. briggsae CBR-LIN-11 protein [Caenorhabditis briggsae]
Length = 411
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C+ D+ R R+
Sbjct: 75 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDYSR---RYG 131
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 132 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 179
Query: 122 GKLFCRNDF 130
G C+NDF
Sbjct: 180 GNRMCQNDF 188
>gi|291397314|ref|XP_002715058.1| PREDICTED: LIM homeobox protein 4 [Oryctolagus cuniculus]
Length = 390
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G +C+ DFF+
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSFYCKEDFFK-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G +C+ DFF
Sbjct: 25 QQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSFYCKEDFF 82
>gi|2149584|gb|AAC53336.1| LIM-homeobox protein [Mus musculus]
Length = 190
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 1 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFKRFGTKC 60
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C G+ + ++ A + +H C C C+ L+ D+ + E
Sbjct: 61 TACQQGIPPTQVVRKAQ--------------DFVYHLHCFACIICNRQLATGDEFYLMED 106
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 107 GRLVCKEDY 115
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 1 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 53
>gi|348569787|ref|XP_003470679.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Cavia
porcellus]
Length = 402
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>gi|441623345|ref|XP_003279691.2| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3
[Nomascus leucogenys]
Length = 419
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK 89
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|449266486|gb|EMC77539.1| LIM/homeobox protein Lhx4, partial [Columba livia]
Length = 236
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 2 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK--- 58
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C L+ D+ +
Sbjct: 59 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFY 106
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 107 LMEDGRLVCKEDY 119
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 57
>gi|405971990|gb|EKC36789.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 319
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
+CAGC PI DK+L + + WH +C++C C +LS C+S+ G L+C++D+ +
Sbjct: 14 TCAGCGYPIRDKYLFKINDNVWHENCLQCAICRLSLSGTCYSKNGHLYCKSDYDKLFRGR 73
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSRE 121
SGCG ++ L+ V T+H C RC +C H L D + + R+
Sbjct: 74 CSGCGFSINPHELVR--------------RVYSNTYHLPCFRCVECGHVLQDGNEFYIRD 119
Query: 122 GKLFCRND 129
G++FCR D
Sbjct: 120 GQIFCRYD 127
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C + + S +CAGC PI DK+L + + WH +C++C C +LS C+S+ G L+C
Sbjct: 3 CEIKMPSIHEETCAGCGYPIRDKYLFKINDNVWHENCLQCAICRLSLSGTCYSKNGHLYC 62
Query: 127 RNDF 130
++D+
Sbjct: 63 KSDY 66
>gi|426223032|ref|XP_004005683.1| PREDICTED: LIM homeobox transcription factor 1-beta [Ovis aries]
Length = 405
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 12/130 (9%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 55 GCEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY------- 107
Query: 64 PSGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSR 120
G L C+GC EK +F++ LE +H C C C L D+ +
Sbjct: 108 --GVAGTLQQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLK 165
Query: 121 EGKLFCRNDF 130
EG+L C+ D+
Sbjct: 166 EGQLLCKGDY 175
>gi|17508255|ref|NP_492696.1| Protein LIN-11 [Caenorhabditis elegans]
gi|2506818|sp|P20154.2|LIN11_CAEEL RecName: Full=Protein lin-11; AltName: Full=Abnormal cell lineage
protein 11
gi|3881427|emb|CAB02310.1| Protein LIN-11 [Caenorhabditis elegans]
Length = 405
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFSR+G + C+ DF R R+
Sbjct: 68 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSR---RYS 124
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 125 Q------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 172
Query: 122 GKLF-CRNDF 130
G F C++DF
Sbjct: 173 GNRFVCQSDF 182
>gi|326666245|ref|XP_001922131.3| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Danio
rerio]
Length = 396
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE PI D+FLL V E +WH CV+C C LS C+ R+ L+C++D+ + VR
Sbjct: 60 CAGCESPIADRFLLRVNELSWHETCVKCAVCRSALSGTCYCRDRLLYCKHDYEKLFVRKC 119
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
S C + S LI + VL + +H C C +C L D+ +EG
Sbjct: 120 SACLQAIGRSELI--------------MRVLGQVYHLGCFSCCECERRLQRGDEFVLKEG 165
Query: 123 KLFCRNDF 130
+L CR D+
Sbjct: 166 QLLCRGDY 173
>gi|306526228|sp|Q25132.2|LHX3_HALRO RecName: Full=LIM/homeobox protein Lhx3; Short=Hr-Lhx3; Short=LIM
homeobox protein 3; AltName: Full=LIM/homeobox protein
LIM; Short=HrLIM
Length = 692
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GCE I D+F+L V ++ WH+ ++C DC LS+KCFSR +FC++DFF+
Sbjct: 282 CTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSEKCFSRGNLVFCKDDFFKRFGTKC 341
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE- 121
+ CG G+ + +I A + +H + C+ CH + D+ + E
Sbjct: 342 TACGHGIPPTEVIRRAQ--------------DNVYHLEGFCCFLCHEKMGTGDQFYLLED 387
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 388 NRLVCKKDY 396
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GCE I D+F+L V ++ WH+ ++C DC LS+KCFSR +FC++DFF
Sbjct: 282 CTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSEKCFSRGNLVFCKDDFF 334
>gi|449509307|ref|XP_002191188.2| PREDICTED: LIM/homeobox protein Lhx4-like, partial [Taeniopygia
guttata]
Length = 412
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CFSR G ++C+ DFF+
Sbjct: 44 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDFFK--- 100
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C L+ D+ +
Sbjct: 101 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFY 148
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 149 LMEDGRLVCKEDY 161
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CFSR G ++C+ DFF
Sbjct: 44 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDFF 99
>gi|449268911|gb|EMC79740.1| LIM homeobox transcription factor 1-alpha [Columba livia]
Length = 343
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 67/133 (50%), Gaps = 18/133 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M CAGC+ PI D+FLL V ER+WH CV+C C L+ C+ R +L+C++D+
Sbjct: 1 MREVCAGCDTPISDRFLLRVNERSWHEGCVKCAVCLQPLAGTCYCRNRQLYCKHDY---- 56
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
C+ C K I + ++ VLE +H C C +C L D+
Sbjct: 57 -----------EKLFQTKCSSCLKAIAPSELIMRVLENVYHVHCFYCCECERRLQRGDEF 105
Query: 118 FSREGKLFCRNDF 130
+EG+L CR+D+
Sbjct: 106 VLKEGQLLCRSDY 118
>gi|363736513|ref|XP_001235592.2| PREDICTED: LIM/homeobox protein Lhx4 [Gallus gallus]
Length = 374
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CF+R G ++C+ DFF+
Sbjct: 12 QIPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFK-- 69
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C L+ D+
Sbjct: 70 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEF 116
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 117 YLMEDGRLVCKEDY 130
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 42/57 (73%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CF+R G ++C+ DFF
Sbjct: 12 QIPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFF 68
>gi|402591685|gb|EJW85614.1| hypothetical protein WUBG_03477, partial [Wuchereria bancrofti]
Length = 103
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R+G + CR DF R
Sbjct: 1 MAICAGCNNAILDRYVFHVLEKAWHASCIQCADCKELLSETCFTRDGLILCRKDFARRYG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
+GC +GL + L+ ++ +H C +C C L
Sbjct: 61 TRCAGCNMGLDRNDLVR--------------RARDKIFHVQCFQCTVCQKKL 98
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 39/55 (70%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
+ CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R+G + CR DF
Sbjct: 1 MAICAGCNNAILDRYVFHVLEKAWHASCIQCADCKELLSETCFTRDGLILCRKDF 55
>gi|326924792|ref|XP_003208609.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx4-like
[Meleagris gallopavo]
Length = 384
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 72/133 (54%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CF+R G ++C+ DFF+
Sbjct: 24 IPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFK--- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
RF + C C++ I + + + +H C C C L+ D+ +
Sbjct: 81 RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFY 128
Query: 119 SRE-GKLFCRNDF 130
E G+L C+ D+
Sbjct: 129 LMEDGRLVCKEDY 141
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 53 RNDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT 112
RN R VR CG G + CAGC + ILDKF+L VL+R WH+ C++C DC
Sbjct: 5 RNPEQRLCVRARHPCGPG----EIPQCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQ 60
Query: 113 LSDKCFSREGKLFCRNDFF 131
L+++CF+R G ++C+ DFF
Sbjct: 61 LAERCFARAGSVYCKEDFF 79
>gi|308485364|ref|XP_003104881.1| CRE-LIN-11 protein [Caenorhabditis remanei]
gi|308257579|gb|EFP01532.1| CRE-LIN-11 protein [Caenorhabditis remanei]
Length = 415
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C+ D+ R R+
Sbjct: 78 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDYSR---RYG 134
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 135 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 182
Query: 122 GKLF-CRNDF 130
G F C+NDF
Sbjct: 183 GNRFMCQNDF 192
>gi|432868110|ref|XP_004071416.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 398
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 67/128 (52%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE PI D+FLL V ER+WH CV+C C TL+ C+ R+ L+C+ D+ + VR
Sbjct: 55 CAGCESPISDRFLLRVNERSWHETCVKCAVCLSTLTGTCYCRDRLLYCKLDYEKLFVRKC 114
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
S C + S LI + VL + +H C C +C L D+ +EG
Sbjct: 115 SACLQVIGRSELI--------------MRVLGQVYHLGCFSCCECERRLQRGDEFVLKEG 160
Query: 123 KLFCRNDF 130
+L CR D+
Sbjct: 161 QLLCRMDY 168
>gi|236201759|dbj|BAH58772.1| LIM homeodomain protein Hr-Lhx3 b-form [Halocynthia roretzi]
Length = 611
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GCE I D+F+L V ++ WH+ ++C DC LS+KCFSR +FC++DFF+
Sbjct: 201 CTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSEKCFSRGNLVFCKDDFFKRFGTKC 260
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE- 121
+ CG G+ + +I A + +H + C+ CH + D+ + E
Sbjct: 261 TACGHGIPPTEVIRRAQ--------------DNVYHLEGFCCFLCHEKMGTGDQFYLLED 306
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 307 NRLVCKKDY 315
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 26/53 (49%), Positives = 37/53 (69%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GCE I D+F+L V ++ WH+ ++C DC LS+KCFSR +FC++DFF
Sbjct: 201 CTGCEHRIFDRFILKVQDKPWHSQGLKCNDCSAQLSEKCFSRGNLVFCKDDFF 253
>gi|393904553|gb|EJD73731.1| hypothetical protein LOAG_18862, partial [Loa loa]
Length = 114
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 14/109 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R G + CR DF R
Sbjct: 4 CAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDFARRYGTRC 63
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
+GC +GL + L+ ++ +H C +C C L
Sbjct: 64 AGCNMGLDRNDLVR--------------RARDKVFHVQCFQCTVCQKKL 98
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 37/52 (71%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R G + CR DF
Sbjct: 4 CAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDF 55
>gi|170034030|ref|XP_001844878.1| arrowhead [Culex quinquefasciatus]
gi|167875286|gb|EDS38669.1| arrowhead [Culex quinquefasciatus]
Length = 169
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 76/148 (51%), Gaps = 19/148 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS 59
L +C C +PI DK+L +V +WH C+RC C L + C+ R+ +++CR D+ +
Sbjct: 20 LRTCVACGEPIADKYLFDVDGCSWHGSCLRCSVCLTLLERQPSCYFRDRQVYCRTDYAKE 79
Query: 60 PVRFPS-------------GCGVGLS--SSMLISCAGCEKPILDKFLLNVLERTWHADCV 104
P+ CGV + + L +C C +PI DK+L +V +WH C+
Sbjct: 80 GCCSPTFQDVPASPPTAAAACGVMMRKIKTELRTCVACGEPIADKYLFDVDGCSWHGSCL 139
Query: 105 RCYDCHHTLSDK--CFSREGKLFCRNDF 130
RC C L + C+ R+ +++CR D+
Sbjct: 140 RCSVCLTLLERQPSCYFRDRQVYCRTDY 167
>gi|194869786|ref|XP_001972521.1| GG13839 [Drosophila erecta]
gi|190654304|gb|EDV51547.1| GG13839 [Drosophila erecta]
Length = 531
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 183 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 242
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 243 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 288
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 289 VKQGQLFCRFDY 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++ L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 175 GLAMAPPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 234
Query: 128 NDF 130
D+
Sbjct: 235 VDY 237
>gi|443701940|gb|ELU00130.1| hypothetical protein CAPTEDRAFT_97456 [Capitella teleta]
Length = 269
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M +C GC I D+F + VL++ WH CV+C DC L D C++RE KL+C++DFF+
Sbjct: 1 MSTTCIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDFFK-- 58
Query: 61 VRFPSGCGV---GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
RF + CGV LS S L+ A L+R +H C C C L
Sbjct: 59 -RFATQCGVCKRDLSPSDLVRRA--------------LDRVYHLQCFTCLVCRRQL 99
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M +C GC I D+F + VL++ WH CV+C DC L D C++RE KL+C++DFF
Sbjct: 1 MSTTCIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDFF 57
>gi|195493804|ref|XP_002094570.1| GE20130 [Drosophila yakuba]
gi|194180671|gb|EDW94282.1| GE20130 [Drosophila yakuba]
Length = 540
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 192 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 251
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 252 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 297
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 298 VKQGQLFCRFDY 309
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++ L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 184 GMAMAPPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 243
Query: 128 NDF 130
D+
Sbjct: 244 VDY 246
>gi|195589788|ref|XP_002084631.1| GD12730 [Drosophila simulans]
gi|194196640|gb|EDX10216.1| GD12730 [Drosophila simulans]
Length = 527
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 179 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 238
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 239 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 284
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 285 VKQGQLFCRFDY 296
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++ L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 171 GLAMAPPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 230
Query: 128 NDF 130
D+
Sbjct: 231 VDY 233
>gi|195327095|ref|XP_002030257.1| GM24666 [Drosophila sechellia]
gi|194119200|gb|EDW41243.1| GM24666 [Drosophila sechellia]
Length = 527
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 179 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 238
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 239 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 284
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 285 VKQGQLFCRFDY 296
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 41/63 (65%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++ L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 171 GLAMAPPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 230
Query: 128 NDF 130
D+
Sbjct: 231 VDY 233
>gi|410979495|ref|XP_003996119.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3 [Felis
catus]
Length = 309
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C+RC DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHAPLAERCFSRGESVYCKDDFFK---RF- 89
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLSDK---CFSR 120
CA C+ I + + + +H C C C L+ F
Sbjct: 90 -----------GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFSFME 138
Query: 121 EGKLFCRNDF 130
+ +L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C+RC DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLRCSDCHAPLAERCFSRGESVYCKDDFF 86
>gi|405963181|gb|EKC28778.1| LIM domain transcription factor LMO4.1 [Crassostrea gigas]
Length = 165
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 18/134 (13%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRS 59
+ +CAGC I D+FLL+ +ER WH C++C C L CF+R G + C+ND+ R
Sbjct: 20 IKACAGCGSRISDRFLLHAMERFWHTACLKCSCCQTNLEQLGSCFTRAGMILCKNDYMR- 78
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
F SG SCAGC + I ++ ++ +H C CY C+ LS D+
Sbjct: 79 --LFCSG----------GSCAGCGQSIPANEMVMRTQGNVYHLKCFNCYTCNMPLSPGDR 126
Query: 117 CFSREGKLFCRNDF 130
G + C ND+
Sbjct: 127 FGVVNGNIICENDY 140
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 17/79 (21%)
Query: 55 DFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
D + +P++ CAGC I D+FLL+ +ER WH C++C C L
Sbjct: 14 DGYNAPIKA---------------CAGCGSRISDRFLLHAMERFWHTACLKCSCCQTNLE 58
Query: 115 D--KCFSREGKLFCRNDFF 131
CF+R G + C+ND+
Sbjct: 59 QLGSCFTRAGMILCKNDYM 77
>gi|281366134|ref|NP_648567.2| CG4328 [Drosophila melanogaster]
gi|211938623|gb|ACJ13208.1| FI06571p [Drosophila melanogaster]
gi|272455176|gb|AAF49932.2| CG4328 [Drosophila melanogaster]
Length = 544
Score = 76.3 bits (186), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 196 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 255
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 256 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 301
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 302 VKQGQLFCRFDY 313
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++S L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 188 GLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 247
Query: 128 NDF 130
D+
Sbjct: 248 VDY 250
>gi|345487077|ref|XP_001599660.2| PREDICTED: hypothetical protein LOC100114734 [Nasonia vitripennis]
Length = 644
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/130 (33%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L ++R WHA C++C C L + CFSREG ++C+ D++R
Sbjct: 237 VVCAGCGLRISDRFYLQAVDRRWHASCLQCSHCRQGLDGEVTCFSREGNIYCKKDYYR-- 294
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ SM CA C+ IL + ++ E +H C C C L+ D
Sbjct: 295 ----------MFGSMK-RCARCQAAILASELVMRARELVFHVRCFSCAACSVPLTKGDHF 343
Query: 118 FSREGKLFCR 127
REG + CR
Sbjct: 344 GMREGAVLCR 353
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSREG ++C+ D++
Sbjct: 237 VVCAGCGLRISDRFYLQAVDRRWHASCLQCSHCRQGLDGEVTCFSREGNIYCKKDYY 293
>gi|109019176|ref|XP_001115086.1| PREDICTED: LIM/homeobox protein Lhx4-like isoform 2 [Macaca
mulatta]
Length = 390
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 71/134 (52%), Gaps = 19/134 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ D R
Sbjct: 26 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDPDR-- 83
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
RF + C C++ I + + + +H C C C+ L+ D+
Sbjct: 84 -RFGT------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEF 130
Query: 118 FSRE-GKLFCRNDF 130
+ E G+L C+ D+
Sbjct: 131 YLMEDGRLVCKEDY 144
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 43/61 (70%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 D 129
D
Sbjct: 80 D 80
>gi|324540769|gb|ADY49599.1| Protein lin-11, partial [Ascaris suum]
Length = 141
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 67/133 (50%), Gaps = 17/133 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC ILD+++ +VL++TWHA C++C DC L++ CFSR+G + CR DF R
Sbjct: 1 MAICGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTETCFSRDGLILCRQDFSRRFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+GC V L + L+ ++ +H C +C C L ++ +
Sbjct: 61 TRCAGCNVALDRNDLVR--------------RARDKVFHVQCFQCTVCQKKLDTGEQLYI 106
Query: 120 REGKLF-CRNDFF 131
G F C++D+
Sbjct: 107 LNGNRFVCKHDYL 119
>gi|357609297|gb|EHJ66387.1| hypothetical protein KGM_05821 [Danaus plexippus]
Length = 471
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 353 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRADYFD---MF 408
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC KPI++ ++ + L WH DC C DC + K F + EG
Sbjct: 409 APKCG------------GCNKPIMENYI-SALNTQWHPDCFVCKDCQMAVKGKTFYAMEG 455
Query: 123 KLFC 126
K C
Sbjct: 456 KPVC 459
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L RTWH + C C+ L + F R+G +C D+ SP
Sbjct: 294 CNACEKPIVGQ-VITALGRTWHPEHFTCAHCNQELGTRNFFERDGHPYCEPDYHNLFSP- 351
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 352 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHER 394
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 395 DGKPYCRADYF 405
>gi|301616969|ref|XP_002937919.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 393
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KLFC+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|194747131|ref|XP_001956006.1| GF24989 [Drosophila ananassae]
gi|190623288|gb|EDV38812.1| GF24989 [Drosophila ananassae]
Length = 554
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PI D++++ V+E ++H C++C C L CF+REGKL+CR D+ R +R
Sbjct: 207 CAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCFAREGKLYCRIDYERLYIRN- 265
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C GC I D+ ++ E +H C C C L ++ ++
Sbjct: 266 -------------RCLGCGHKIASDELVMRCHENVFHLKCFACVVCGVLLKKGEQYVVKQ 312
Query: 122 GKLFCRNDF 130
G+LFCR D+
Sbjct: 313 GQLFCRFDY 321
>gi|301616967|ref|XP_002937918.1| PREDICTED: LIM/homeobox protein LMX-1.2-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 400
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KLFC+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|431898835|gb|ELK07205.1| LIM homeobox transcription factor 1-beta, partial [Pteropus alecto]
Length = 291
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 10 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 61
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 62 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 114
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 115 GQLLCKGDY 123
>gi|158299816|ref|XP_319836.3| AGAP009088-PA [Anopheles gambiae str. PEST]
gi|157013700|gb|EAA14726.3| AGAP009088-PA [Anopheles gambiae str. PEST]
Length = 389
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 71/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ C GC + ILD+F+L V +RTWHA C++C +C L++KCF+R G+LFC++DFF+
Sbjct: 38 IPKCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFFKRYG 97
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ C +G+ + ++ A + +H C C C L+ D+ +
Sbjct: 98 TKCAACDLGIPPTQVVRRA--------------QDNVYHLQCFMCSMCSRQLNTGDEFYL 143
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 144 MEDCKLICKPDY 155
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 44/58 (75%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C GC + ILD+F+L V +RTWHA C++C +C L++KCF+R G+LFC++DFF
Sbjct: 36 STIPKCGGCHELILDRFILKVSDRTWHAKCLQCSECRVQLNEKCFARNGQLFCKDDFF 93
>gi|395505734|ref|XP_003757194.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Sarcophilus harrisii]
Length = 394
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|334311509|ref|XP_001366137.2| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Monodelphis domestica]
Length = 394
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|395505736|ref|XP_003757195.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Sarcophilus harrisii]
Length = 404
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|324511990|gb|ADY44978.1| Protein lin-11 [Ascaris suum]
Length = 368
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 69/133 (51%), Gaps = 23/133 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC ILD+++ +VL++TWHA C++C DC L++ CFSR+G + CR DF R RF
Sbjct: 4 CGGCNTAILDRYVFHVLDKTWHASCIQCADCKEPLTETCFSRDGLILCRQDFSR---RFG 60
Query: 65 S---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ GC V L + L+ A ++ +H C +C C L ++ +
Sbjct: 61 TRCAGCNVALDRNDLVRRA--------------RDKVFHVQCFQCTVCQKKLDTGEQLYI 106
Query: 120 REGKLF-CRNDFF 131
G F C++D+
Sbjct: 107 LNGNRFVCKHDYL 119
>gi|410902629|ref|XP_003964796.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 376
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 66/128 (51%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGCE PI D+FLL V ER+WH CV+C C L+ C+ R+ L+C++D+ + VR
Sbjct: 32 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDYEKLFVRKC 91
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
S C + S LI + V + +H C C +C L D+ +EG
Sbjct: 92 SSCLQVIGRSELI--------------MRVQGQVYHLGCFTCCECERRLQRGDEFVLKEG 137
Query: 123 KLFCRNDF 130
+L CR D+
Sbjct: 138 QLLCRMDY 145
>gi|334311511|ref|XP_003339631.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Monodelphis domestica]
Length = 401
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|291222254|ref|XP_002731132.1| PREDICTED: paxillin-like, partial [Saccoglossus kowalevskii]
Length = 902
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI+ + L+ L +TWH + C C L + F R+G+ FC D+ SP
Sbjct: 669 CAACNKPIVGQ-LVTALGKTWHPEHFTCSHCQTELGTQNFFERDGQPFCDKDYHNLFSP- 726
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PIL+K + L++TWH + C C +D+ F +
Sbjct: 727 ----------------RCAYCHGPILEK-CVTALDKTWHPEHFFCAQCGRHFADEGFHEK 769
Query: 121 EGKLFCRNDFF 131
+GK FCR+D+F
Sbjct: 770 DGKAFCRDDYF 780
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PIL+K + L++TWH + C C +D+ F ++GK FCR+D+F
Sbjct: 728 CAYCHGPILEK-CVTALDKTWHPEHFFCAQCGRHFADEGFHEKDGKAFCRDDYF------ 780
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CAGC + I++ + ++ L WH +C C +C + F EG
Sbjct: 781 ---------DMFAPKCAGCNRAIMENY-ISALNVQWHPECFVCTECRTPFNGGSFFDHEG 830
Query: 123 KLFC 126
+C
Sbjct: 831 HPYC 834
>gi|395505738|ref|XP_003757196.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 3
[Sarcophilus harrisii]
Length = 401
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
>gi|145587040|gb|ABP87885.1| IP01439p [Drosophila melanogaster]
Length = 467
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 119 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 178
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 179 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 224
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 225 VKQGQLFCRFDY 236
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++S L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 111 GLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 170
Query: 128 NDF 130
D+
Sbjct: 171 VDY 173
>gi|3348118|gb|AAC27793.1| LIM homeodomain protein [Mus musculus]
Length = 372
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|45382493|ref|NP_990689.1| LIM/homeobox protein LMX-1.2 [Gallus gallus]
gi|1708855|sp|P53413.1|LMX1B_CHICK RecName: Full=LIM/homeobox protein LMX-1.2; Short=Homeobox protein
LMX-1; Short=LIM/homeobox protein 1; Short=LMX
gi|1050198|gb|AAA96240.1| LIM1 domain bp 172-315, LIM2 domain bp 349-501, homeobox domain bp
655-831 [Gallus gallus]
Length = 377
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>gi|297271296|ref|XP_002800229.1| PREDICTED: LIM homeobox transcription factor 1-beta [Macaca
mulatta]
Length = 385
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|1145814|gb|AAA84995.1| LIM homeodomain protein [Gallus gallus]
Length = 377
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 66/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>gi|417410318|gb|JAA51634.1| Putative lim homeobox transcription factor 1-beta, partial
[Desmodus rotundus]
Length = 391
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 52 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 103
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 104 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 156
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 157 GQLLCKGDY 165
>gi|255759880|ref|NP_034855.2| LIM homeobox transcription factor 1-beta [Mus musculus]
gi|109112190|ref|XP_001097412.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Macaca mulatta]
gi|297685370|ref|XP_002820263.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 1
[Pongo abelii]
gi|395824199|ref|XP_003785358.1| PREDICTED: LIM homeobox transcription factor 1-beta [Otolemur
garnettii]
gi|403299811|ref|XP_003940668.1| PREDICTED: LIM homeobox transcription factor 1-beta [Saimiri
boliviensis boliviensis]
gi|410979114|ref|XP_003995931.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Felis catus]
gi|341940912|sp|O88609.2|LMX1B_MOUSE RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3132909|gb|AAC39738.1| LIM homeodomain protein LMX1B [Homo sapiens]
gi|47479658|gb|AAH69601.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|85567565|gb|AAI12121.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|109731283|gb|AAI13492.1| LIM homeobox transcription factor 1, beta [Homo sapiens]
gi|111600533|gb|AAI19170.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|116138517|gb|AAI25470.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|119608048|gb|EAW87642.1| LIM homeobox transcription factor 1, beta, isoform CRA_b [Homo
sapiens]
gi|148676655|gb|EDL08602.1| LIM homeobox transcription factor 1 beta [Mus musculus]
gi|312150934|gb|ADQ31979.1| LIM homeobox transcription factor 1, beta [synthetic construct]
gi|313882992|gb|ADR82982.1| LIM homeobox transcription factor 1, beta (LMX1B) [synthetic
construct]
Length = 372
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|157412000|gb|ABV54626.1| Lim homeobox protein 3 splice variant [Salmo salar]
Length = 379
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
V LSS+ + CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C+
Sbjct: 2 VILSSTEIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKE 61
Query: 129 DFF 131
DFF
Sbjct: 62 DFF 64
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C+ DFF+ RF
Sbjct: 12 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKEDFFK---RFG 68
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 69 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 116
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 117 DSRLVCKADY 126
>gi|297685372|ref|XP_002820264.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 2
[Pongo abelii]
Length = 383
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|2497672|sp|Q60564.1|LMX1B_MESAU RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|1432087|gb|AAB62320.1| LIM-homeodomain protein [Mesocricetus auratus]
Length = 369
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 23 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 74
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 75 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 127
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 128 GQLLCKGDY 136
>gi|149038965|gb|EDL93185.1| LIM homeobox transcription factor 1 beta [Rattus norvegicus]
Length = 372
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|219520075|gb|AAI43802.1| LMX1B protein [Homo sapiens]
Length = 383
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|198464778|ref|XP_001353365.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
gi|198149875|gb|EAL30872.2| GA18112 [Drosophila pseudoobscura pseudoobscura]
Length = 553
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
+CA C +PI D++++ V++ ++H C++C C L C++REGKL+CR D+ R +R
Sbjct: 208 NCAHCCRPISDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYAREGKLYCRIDYERLYIRN 267
Query: 64 PSGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
C GC K D+ ++ E +H C C C L ++ +
Sbjct: 268 --------------RCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVK 313
Query: 121 EGKLFCRNDF 130
+G+LFCR D+
Sbjct: 314 QGQLFCRFDY 323
>gi|410979118|ref|XP_003995933.1| PREDICTED: LIM homeobox transcription factor 1-beta isoform 4
[Felis catus]
Length = 382
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|47480835|gb|AAH69588.1| LMX1B protein [Homo sapiens]
Length = 377
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 31 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 82
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 83 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 135
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 136 GQLLCKGDY 144
>gi|385862228|ref|NP_001245353.1| LIM homeobox transcription factor 1-beta [Sus scrofa]
Length = 379
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|8247930|sp|O60663.2|LMX1B_HUMAN RecName: Full=LIM homeobox transcription factor 1-beta; AltName:
Full=LIM/homeobox protein 1.2; Short=LMX-1.2; AltName:
Full=LIM/homeobox protein LMX1B
gi|3335524|gb|AAC27294.1| LIM homeodomain protein [Homo sapiens]
gi|119608047|gb|EAW87641.1| LIM homeobox transcription factor 1, beta, isoform CRA_a [Homo
sapiens]
Length = 379
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|15146350|dbj|BAB62818.1| LIM homeobox 4 transcript variant [Homo sapiens]
Length = 60
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 43/58 (74%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+
Sbjct: 3 QIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK 60
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 42/58 (72%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 2 QQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 59
>gi|2641222|gb|AAB86860.1| homeobox protein LIM-3 [Danio rerio]
Length = 374
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF+ RF
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFK---RFG 60
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 61 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCNACIVCKRQLATGDEYYLME 108
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 109 DSRLVCKADY 118
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFF 56
>gi|427795151|gb|JAA63027.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 182
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC ILD++LL+ L+R WH C++C C TL+D CF++ G + CRND+ R
Sbjct: 42 CAGCGAKILDRYLLHALDRYWHNGCLKCSCCQATLADIGASCFAKAGMILCRNDYIRL-- 99
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S +C+GC + I + +++ + +H C C CH L D+
Sbjct: 100 -------FGTSG----ACSGCGQMIPANDYVMRAAQNVYHVKCFACVKCHSQLVPGDRYN 148
Query: 119 SREGKLFCRND 129
G + C D
Sbjct: 149 LVNGNVLCEQD 159
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC ILD++LL+ L+R WH C++C C TL+D CF++ G + CRND+
Sbjct: 42 CAGCGAKILDRYLLHALDRYWHNGCLKCSCCQATLADIGASCFAKAGMILCRNDYI 97
>gi|345485778|ref|XP_003425336.1| PREDICTED: LOW QUALITY PROTEIN: paxillin-like [Nasonia vitripennis]
Length = 660
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C + ++ F R+GK +CR D+F F
Sbjct: 452 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGNPFGEEGFHERDGKPYCRQDYFD---MF 507
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 508 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 554
Query: 123 KLFC 126
K C
Sbjct: 555 KPLC 558
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C L + F REG +C D+ SP
Sbjct: 393 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCSQELGTRNFFEREGHPYCEPDYHNLFSP- 450
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C + ++ F R
Sbjct: 451 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGNPFGEEGFHER 493
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 494 DGKPYCRQDYF 504
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 57/147 (38%), Gaps = 23/147 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFC---------RN 54
C GC + I++ ++ + L WH DC C DC +S K F + EGK C
Sbjct: 511 CGGCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEGKPLCPKCVGVDEEEG 569
Query: 55 DFFRSPVRFPSG----------CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCV 104
+ +F G C + CAGC KPI + + + R +H +
Sbjct: 570 EEEEEGQKFQGGSFFDHEGQPYCETHYHAKRGSLCAGCHKPITGR-CITAMFRKFHPEHF 628
Query: 105 RCYDCHHTLSDKCFSREG-KLFCRNDF 130
C C L+ F + K +C F
Sbjct: 629 VCAFCLKQLNKGTFKEQNDKPYCHGCF 655
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C L + F REG +C
Sbjct: 384 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCSQELGTRNFFEREGHPYCEP 442
Query: 129 DF 130
D+
Sbjct: 443 DY 444
>gi|209489466|gb|ACI49225.1| hypothetical protein Csp3_JD05.010 [Caenorhabditis angaria]
Length = 344
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 70/133 (52%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
+ CA C +PILD+++ VL + WH +C+RC DC ++ CFSR+G + C+NDF R
Sbjct: 1 MSECAACARPILDRYVFTVLGKCWHQECLRCSDCAAPMTMTCFSRDGLILCKNDFSR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R+ CAGC+ + ++ + ++ +H C +C C L+ D+ +
Sbjct: 58 RYGQ------------RCAGCDGNLDKEELVRRARDKVFHIQCFQCSVCQRLLATGDQLY 105
Query: 119 SREGKLF-CRNDF 130
EG F C+ DF
Sbjct: 106 ILEGNRFVCQTDF 118
>gi|321464128|gb|EFX75138.1| hypothetical protein DAPPUDRAFT_323670 [Daphnia pulex]
Length = 278
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 67/132 (50%), Gaps = 23/132 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC ILD+F+L VL+R WH +C++C DC L DKCF R G +C+ DFFR RF
Sbjct: 41 CAGCSGFILDRFILKVLDRPWHTECLKCMDCGTHLVDKCFVRGGSTYCKEDFFR---RFG 97
Query: 65 SGCG---VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C G++ S ++ A +H +C +C C L D+ +
Sbjct: 98 TKCACCDQGIAPSQIVRRA--------------QHHVYHLECFQCVLCGRQLDTGDEFYL 143
Query: 120 REG-KLFCRNDF 130
E KL C+ D+
Sbjct: 144 MEDRKLVCKADY 155
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ + CAGC ILD+F+L VL+R WH +C++C DC L DKCF R G +C+ DFF
Sbjct: 35 EATIPRCAGCSGFILDRFILKVLDRPWHTECLKCMDCGTHLVDKCFVRGGSTYCKEDFF 93
>gi|270016014|gb|EFA12462.1| hypothetical protein TcasGA2_TC010609 [Tribolium castaneum]
Length = 488
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ C+KPI+ + ++ L +TWH + C C L + F R+GK +C D+ SP
Sbjct: 311 CSACDKPIVGQ-VITALGKTWHPEHFTCAHCTQELGTRNFFERDGKPYCEPDYHNLFSP- 368
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 369 ----------------RCAYCNGPILDK-CVTALEKTWHMEHFFCAQCGKQFGEEGFHER 411
Query: 121 EGKLFCRNDFF 131
EGK +CR+D+F
Sbjct: 412 EGKPYCRDDYF 422
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F REGK +CR+D+F F
Sbjct: 370 CAYCNGPILDK-CVTALEKTWHMEHFFCAQCGKQFGEEGFHEREGKPYCRDDYFD---MF 425
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C + I++ ++ + L WH DC C DC + K F + EG
Sbjct: 426 APKCG------------ACNRAIMENYI-SALNAQWHPDCFVCRDCKLPVQGKSFYAVEG 472
Query: 123 KLFC 126
K C
Sbjct: 473 KPVC 476
Score = 42.7 bits (99), Expect = 0.045, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G+++S C+ C+KPI+ + ++ L +TWH + C C L + F R+GK +C
Sbjct: 302 GVNTSQKGCCSACDKPIVGQ-VITALGKTWHPEHFTCAHCTQELGTRNFFERDGKPYCEP 360
Query: 129 DF 130
D+
Sbjct: 361 DY 362
>gi|348516128|ref|XP_003445591.1| PREDICTED: LIM homeobox transcription factor 1-beta.1-like
[Oreochromis niloticus]
Length = 399
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 68/129 (52%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V + +WH +C++C C L++ C+ RE KL+C++D+
Sbjct: 56 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTNSCYFRERKLYCKHDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ +E
Sbjct: 108 -------QQLFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKIDY 169
>gi|307192546|gb|EFN75734.1| Paxillin [Harpegnathos saltator]
Length = 621
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 354 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCETDYHNLFSP- 411
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 412 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 454
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 455 DGKPYCREDYF 465
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 413 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 468
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 469 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 515
Query: 123 KLFC 126
+ C
Sbjct: 516 QPVC 519
Score = 43.5 bits (101), Expect = 0.024, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 345 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCET 403
Query: 129 DF 130
D+
Sbjct: 404 DY 405
>gi|307174007|gb|EFN64717.1| Paxillin [Camponotus floridanus]
Length = 610
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 343 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCETDYHNLFSP- 400
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 401 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 443
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 444 DGKPYCREDYF 454
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 402 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 457
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 458 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 504
Query: 123 KLFC 126
+ C
Sbjct: 505 QPVC 508
Score = 43.5 bits (101), Expect = 0.025, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 334 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCET 392
Query: 129 DF 130
D+
Sbjct: 393 DY 394
>gi|405959294|gb|EKC25346.1| Paxillin [Crassostrea gigas]
Length = 549
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI+DK + L+ TWH D C C D F + GK +CR DF F
Sbjct: 375 CAYCNGPIVDK-CVTALDLTWHPDHFFCAQCGRPFGDDGFHEKNGKAYCRQDFLD---MF 430
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC PILD + ++ L R WH +C C DCH + F EG
Sbjct: 431 APRCG------------GCGHPILDNY-ISALSRHWHPECFVCRDCHQPFGGRSFFDHEG 477
Query: 123 KLFCRNDF 130
+C +
Sbjct: 478 LPYCETHY 485
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +P++ + ++ L + WH + C +C+ L K F R+G+ +C D+ + +
Sbjct: 316 CGACNQPVIGQ-VITALGKVWHIEHFTCANCNLPLGTKNFYERDGEAYCEEDYHK--IFA 372
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
P CA C PI+DK + L+ TWH D C C D F + G
Sbjct: 373 P-------------KCAYCNGPIVDK-CVTALDLTWHPDHFFCAQCGRPFGDDGFHEKNG 418
Query: 123 KLFCRNDFF 131
K +CR DF
Sbjct: 419 KAYCRQDFL 427
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/128 (26%), Positives = 51/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC PILD ++ + L R WH +C C DCH + F EG +C +
Sbjct: 434 CGGCGHPILDNYI-SALSRHWHPECFVCRDCHQPFGGRSFFDHEGLPYCETHYHAKRGSL 492
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CA C+KPI + + + + +H + C C L+ F +
Sbjct: 493 ---------------CASCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 536
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 537 KPYCHPCF 544
>gi|309243111|ref|NP_001020338.2| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|48375211|gb|AAT42258.1| LIM homeodomain protein Lmx1b.1 [Danio rerio]
gi|190337176|gb|AAI62952.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
gi|190338183|gb|AAI62932.1| LIM homeobox transcription factor 1, beta 1 [Danio rerio]
Length = 375
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ RE KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ ++
Sbjct: 85 -------QQLFATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKD 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>gi|62461837|gb|AAX83055.1| LIM homeodomain protein [Danio rerio]
Length = 375
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ RE KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ ++
Sbjct: 85 -------QQLFATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKD 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>gi|449509311|ref|XP_004174248.1| PREDICTED: LIM/homeobox protein Lhx4-like [Taeniopygia guttata]
Length = 100
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 43/57 (75%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CFSR G ++C+ DFF+
Sbjct: 44 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDFFK 100
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 42/56 (75%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ CAGC + ILDKF+L VL+R WH+ C++C DC L+++CFSR G ++C+ DFF
Sbjct: 44 IPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFSRAGSVYCKEDFF 99
>gi|397492168|ref|XP_003817000.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 2 [Pan paniscus]
Length = 390
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 20 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 76
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 77 TKCAACQLGIPPTQVVRRA 95
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G + + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++D
Sbjct: 11 GAPAPEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDD 70
Query: 130 FF 131
FF
Sbjct: 71 FF 72
>gi|334853818|gb|AEH05849.1| Lhx3, partial [Capra hircus]
gi|334853820|gb|AEH05850.1| Lhx3, partial [Capra hircus]
Length = 124
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFKRFGTKC 63
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ + +H C C C L+ D+ + E
Sbjct: 64 AACQLGIPPTQVVR--------------RAQDFVYHLHCFACVVCKRQLATGDEFYLMED 109
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 110 SRLVCKADY 118
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 56
>gi|410903464|ref|XP_003965213.1| PREDICTED: LIM/homeobox protein Lhx3-like isoform 3 [Takifugu
rubripes]
Length = 390
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 19 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFFK---RFG 75
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 76 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 123
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 124 DSRLVCKTDY 133
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 19 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQAQLAEKCFSRGDSVYCKEDFF 71
>gi|397492170|ref|XP_003817001.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Pan paniscus]
Length = 377
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFFR RF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFR---RFG 63
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 64 TKCAACQLGIPPTQVVRRA 82
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 59
>gi|391340116|ref|XP_003744391.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Metaseiulus
occidentalis]
Length = 460
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF REGK +C++D+ R
Sbjct: 104 CVGCGSQIQDQYILRVSPDLEWHASCLKCVECLQFLDESCTCFVREGKTYCKSDYHRLFG 163
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
S CG+ S S F++ + +H DC RC C L D+
Sbjct: 164 AKCSKCGLSFSRS--------------DFVMRARGKIFHIDCFRCIACSRQLIPGDEFAI 209
Query: 120 REGKLFCRND 129
RE +LFC+ D
Sbjct: 210 REDELFCKAD 219
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 8/67 (11%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGK 123
CG G+S C GC I D+++L V + WHA C++C +C L + C F REGK
Sbjct: 97 CGNGISL-----CVGCGSQIQDQYILRVSPDLEWHASCLKCVECLQFLDESCTCFVREGK 151
Query: 124 LFCRNDF 130
+C++D+
Sbjct: 152 TYCKSDY 158
>gi|380027050|ref|XP_003697249.1| PREDICTED: protein apterous-like [Apis florea]
Length = 555
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/130 (32%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 184 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR-- 241
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ SM CA C IL + ++ E +H C C C L+ D
Sbjct: 242 ----------MFGSMK-RCARCHAAILASELVMRARELVFHVRCFSCAACAVPLTKGDHF 290
Query: 118 FSREGKLFCR 127
R+G + CR
Sbjct: 291 GMRDGAVLCR 300
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 184 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYY 240
>gi|189242184|ref|XP_969819.2| PREDICTED: similar to paxillin [Tribolium castaneum]
Length = 448
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ C+KPI+ + ++ L +TWH + C C L + F R+GK +C D+ SP
Sbjct: 271 CSACDKPIVGQ-VITALGKTWHPEHFTCAHCTQELGTRNFFERDGKPYCEPDYHNLFSP- 328
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 329 ----------------RCAYCNGPILDK-CVTALEKTWHMEHFFCAQCGKQFGEEGFHER 371
Query: 121 EGKLFCRNDFF 131
EGK +CR+D+F
Sbjct: 372 EGKPYCRDDYF 382
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 59/124 (47%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F REGK +CR+D+F F
Sbjct: 330 CAYCNGPILDK-CVTALEKTWHMEHFFCAQCGKQFGEEGFHEREGKPYCRDDYFD---MF 385
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C + I++ ++ + L WH DC C DC + K F + EG
Sbjct: 386 APKCG------------ACNRAIMENYI-SALNAQWHPDCFVCRDCKLPVQGKSFYAVEG 432
Query: 123 KLFC 126
K C
Sbjct: 433 KPVC 436
Score = 42.4 bits (98), Expect = 0.060, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G+++S C+ C+KPI+ + ++ L +TWH + C C L + F R+GK +C
Sbjct: 262 GVNTSQKGCCSACDKPIVGQ-VITALGKTWHPEHFTCAHCTQELGTRNFFERDGKPYCEP 320
Query: 129 DF 130
D+
Sbjct: 321 DY 322
>gi|25453086|sp|O97581.1|LHX3_PIG RecName: Full=LIM/homeobox protein Lhx3; Short=LIM homeobox
protein 3; AltName: Full=Homeobox protein LIM-3;
AltName: Full=Homeobox protein P-LIM
gi|4091889|gb|AAC99331.1| LIM homeodomain transcription factor [Sus scrofa]
Length = 383
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR L+C++DFF+ RF
Sbjct: 16 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESLYCKDDFFK---RFG 72
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 73 TKCAACQLGIPPTQVVRRA 91
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 44/61 (72%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
L + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR L+C++DF
Sbjct: 8 LGGKEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESLYCKDDF 67
Query: 131 F 131
F
Sbjct: 68 F 68
>gi|308220074|gb|ADO22609.1| LIM class homeobox transcription factor Lhx1.5 [Mnemiopsis leidyi]
Length = 288
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 67/136 (49%), Gaps = 21/136 (15%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGC I DKFL+ VL++TWH++C+ C DC L+D+CF+R GK +C DF +
Sbjct: 1 MVSFCAGCNGKIHDKFLMKVLDKTWHSECLVCVDCGVVLADQCFTRNGKFYCSKDFEK-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERT--WHADCVRCYDCHHTLS--D 115
S SC C+K I D +L +H C C C L +
Sbjct: 59 -------------SQASSCGACKKDITPDDMILKPPNTVGMFHVKCFTCSKCSRQLEAGE 105
Query: 116 KCFSREGKLF-CRNDF 130
+ ++ + K F C DF
Sbjct: 106 EFYTIDNKKFLCSRDF 121
>gi|195160501|ref|XP_002021114.1| GL25001 [Drosophila persimilis]
gi|194118227|gb|EDW40270.1| GL25001 [Drosophila persimilis]
Length = 458
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 67/130 (51%), Gaps = 17/130 (13%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
+CA C +PI D++++ V++ ++H C++C C L C++REGKL+CR D+ R +R
Sbjct: 210 NCAHCCRPISDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYAREGKLYCRIDYERLYIRN 269
Query: 64 PSGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
C GC K D+ ++ E +H C C C L ++ +
Sbjct: 270 --------------RCLGCGHKVAADELVMRCHENVFHLKCFACVVCGALLKKGEQYVVK 315
Query: 121 EGKLFCRNDF 130
+G+LFCR D+
Sbjct: 316 QGQLFCRFDY 325
>gi|215276334|gb|ACJ65031.1| LHX9 [Xenopus laevis]
Length = 399
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C TL + CF+++G ++C+ D++R V
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYYRRFSV 132
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TLS D+
Sbjct: 133 KRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLSTGDQFGM 178
Query: 120 REGKLFCRNDF 130
+E ++CR F
Sbjct: 179 KENLVYCRIHF 189
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C TL + CF+++G ++C+ D++
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYY 127
>gi|322801395|gb|EFZ22056.1| hypothetical protein SINV_03131 [Solenopsis invicta]
Length = 440
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 258 CNACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCETDYHNLFSP- 315
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 316 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 358
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 359 DGKPYCREDYF 369
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 317 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 372
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC + +S K F + EG
Sbjct: 373 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKNPVSGKSFYAMEG 419
Query: 123 KLFC 126
+ C
Sbjct: 420 QPVC 423
Score = 42.7 bits (99), Expect = 0.049, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 249 GVNTTQKGCCNACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCET 307
Query: 129 DF 130
D+
Sbjct: 308 DY 309
>gi|190613352|pdb|2JTN|A Chain A, Nmr Solution Structure Of A Ldb1-Lid:lhx3-Lim Complex
Length = 182
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 70/129 (54%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+
Sbjct: 63 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKC 122
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 123 AACQLGIPPTQVVRRAQ--------------DFVYHLHCFACVVCKRQLATGDEFYLMED 168
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 169 SRLVCKADY 177
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 63 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 115
>gi|410922082|ref|XP_003974512.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Takifugu
rubripes]
Length = 375
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 67/129 (51%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V + +WH +C++C C L+ C+ RE KL+C++D+
Sbjct: 33 CEGCQRPISDRFLMRVNDSSWHEECLQCTVCQQPLTTSCYFRERKLYCKHDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ +E
Sbjct: 85 -------QQLFATKCSGCMEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKFDY 146
>gi|380025704|ref|XP_003696608.1| PREDICTED: paxillin-like isoform 1 [Apis florea]
Length = 572
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 339 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEPDYHNLFSP- 396
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 397 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 439
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 440 DGKPYCREDYF 450
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 57/128 (44%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 398 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 453
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + I++ + ++ L WH DC C DC F EG
Sbjct: 454 APKCG------------GCNRAIMENY-ISALNSQWHPDCFVCRDCRQKFQGGSFFDHEG 500
Query: 123 KLFCRNDF 130
+C +
Sbjct: 501 LPYCETHY 508
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 48/128 (37%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 457 CGGCNRAIMENYI-SALNSQWHPDCFVCRDCRQKFQGGSFFDHEGLPYCETHYHAKRGSL 515
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + R +H + C C L+ F +
Sbjct: 516 ---------------CAGCHKPITGR-CITAMFRKFHPEHFVCAFCLKQLNKGTFKEQND 559
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 560 KPYCHGCF 567
Score = 42.7 bits (99), Expect = 0.047, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 330 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEP 388
Query: 129 DF 130
D+
Sbjct: 389 DY 390
>gi|426363578|ref|XP_004048915.1| PREDICTED: LIM/homeobox protein Lhx3 [Gorilla gorilla gorilla]
Length = 304
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RF- 91
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 92 -----------GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|156373115|ref|XP_001629379.1| predicted protein [Nematostella vectensis]
gi|156216378|gb|EDO37316.1| predicted protein [Nematostella vectensis]
Length = 153
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I+D+FLL L++ WH +C++C C L + C+S+ G + C+ D+ V
Sbjct: 19 CAGCGEKIIDRFLLLALDQYWHVNCLKCSCCEARLGEIGTSCYSKGGMILCKTDY----V 74
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
R G +CA C K I + ++ VL + +H C C CH+ L D+
Sbjct: 75 RLYGNSG---------ACAVCAKLIPATELVMKVLGKVYHLHCFTCTTCHNQLVPGDRFH 125
Query: 119 SREGKLFCRND 129
G+LFC ND
Sbjct: 126 VVNGRLFCEND 136
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 41/64 (64%), Gaps = 4/64 (6%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCR 127
+++SM + CAGC + I+D+FLL L++ WH +C++C C L + C+S+ G + C+
Sbjct: 12 VAASMRV-CAGCGEKIIDRFLLLALDQYWHVNCLKCSCCEARLGEIGTSCYSKGGMILCK 70
Query: 128 NDFF 131
D+
Sbjct: 71 TDYV 74
>gi|196049633|pdb|2RGT|A Chain A, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
gi|196049634|pdb|2RGT|B Chain B, Crystal Structure Of Lhx3 Lim Domains 1 And 2 With The
Binding Domain Of Isl1
Length = 169
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 69/129 (53%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+
Sbjct: 9 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFKRFGTKC 68
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C +G+ + ++ + +H C C C L+ D+ + E
Sbjct: 69 AACQLGIPPTQVVR--------------RAQDFVYHLHCFACVVCKRQLATGDEFYLMED 114
Query: 122 GKLFCRNDF 130
+L C+ D+
Sbjct: 115 SRLVCKADY 123
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 45/60 (75%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S+ + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 2 STPEIPMCAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 61
>gi|350421197|ref|XP_003492766.1| PREDICTED: paxillin-like [Bombus impatiens]
Length = 607
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 398 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 453
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 454 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 500
Query: 123 KLFC 126
K C
Sbjct: 501 KPVC 504
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 339 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEPDYHNLFSP- 396
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 397 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 439
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 440 DGKPYCREDYF 450
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 330 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEP 388
Query: 129 DF 130
D+
Sbjct: 389 DY 390
>gi|301778549|ref|XP_002924694.1| PREDICTED: LOW QUALITY PROTEIN: LIM/homeobox protein Lhx3-like
[Ailuropoda melanoleuca]
Length = 365
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGESVYCKDDFFK---RF- 89
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 90 -----------GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 49/68 (72%), Gaps = 1/68 (1%)
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGK 123
P+ C G + + + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR
Sbjct: 20 PAVCSFGGTQEIPL-CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGES 78
Query: 124 LFCRNDFF 131
++C++DFF
Sbjct: 79 VYCKDDFF 86
>gi|340714019|ref|XP_003395530.1| PREDICTED: paxillin-like [Bombus terrestris]
Length = 605
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 396 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 451
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 452 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 498
Query: 123 KLFC 126
K C
Sbjct: 499 KPVC 502
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 337 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEPDYHNLFSP- 394
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 395 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 437
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 438 DGKPYCREDYF 448
Score = 42.4 bits (98), Expect = 0.055, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 328 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEP 386
Query: 129 DF 130
D+
Sbjct: 387 DY 388
>gi|241999338|ref|XP_002434312.1| lhx4, putative [Ixodes scapularis]
gi|215496071|gb|EEC05712.1| lhx4, putative [Ixodes scapularis]
Length = 79
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 61 VRFPSGCGVGLSSSMLISCAGCE-----KPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
VR V +S + + S + +PILD+F+L VLER+WHA C++C DC L++
Sbjct: 3 VRVRKMTTVAVSLTRMFSSRASQVCRLRQPILDRFILKVLERSWHARCLKCADCQAQLAN 62
Query: 116 KCFSREGKLFCRNDFF 131
KCF+R G ++C++DFF
Sbjct: 63 KCFARNGHVYCKDDFF 78
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 27/50 (54%), Positives = 41/50 (82%)
Query: 9 EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
+PILD+F+L VLER+WHA C++C DC L++KCF+R G ++C++DFF+
Sbjct: 30 RQPILDRFILKVLERSWHARCLKCADCQAQLANKCFARNGHVYCKDDFFK 79
>gi|380025706|ref|XP_003696609.1| PREDICTED: paxillin-like isoform 2 [Apis florea]
Length = 607
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 398 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 453
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 454 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 500
Query: 123 KLFC 126
K C
Sbjct: 501 KPVC 504
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 339 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEPDYHNLFSP- 396
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 397 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 439
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 440 DGKPYCREDYF 450
Score = 42.4 bits (98), Expect = 0.057, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 330 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEP 388
Query: 129 DF 130
D+
Sbjct: 389 DY 390
>gi|195998992|ref|XP_002109364.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
gi|190587488|gb|EDV27530.1| hypothetical protein TRIADDRAFT_20649 [Trichoplax adhaerens]
Length = 208
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 65/130 (50%), Gaps = 17/130 (13%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + I DKFLL V + WH DC+RCY C LS C+ ++ KL+C+ D+ + R
Sbjct: 11 KCTGCNQLIQDKFLLKVADDLWHEDCLRCYKCTQPLSKSCYIKDHKLYCKEDYDKRFGRK 70
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF-SR 120
GC +G+ + D+ + + +H +C+ C C + DK + S
Sbjct: 71 CQGCNLGI--------------LPDEMVYRLHGSCYHINCLLCIVCSRQFKVGDKYYISD 116
Query: 121 EGKLFCRNDF 130
EGK C+ D+
Sbjct: 117 EGKPICKEDY 126
>gi|198473362|ref|XP_001356270.2| GA16481 [Drosophila pseudoobscura pseudoobscura]
gi|198139421|gb|EAL33333.2| GA16481 [Drosophila pseudoobscura pseudoobscura]
Length = 632
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 440 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 493
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ + ++ L WH DC C DC + K F + EG
Sbjct: 494 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 542
Query: 123 KLFCRNDF 130
K CR F
Sbjct: 543 KPDCRQPF 550
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 381 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCETDYHNLFSP- 438
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 439 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 481
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 482 DGKPYCRNDYF 492
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDF----FRS 59
C GC + I++ ++ + L WH DC C DC + K F + EGK CR F F
Sbjct: 499 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEGKPDCRQPFQGGSFFD 557
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF- 118
P C + CAGC KPI + + + ++ +H + C C L+ F
Sbjct: 558 HEGLPY-CETHYHAKRGSLCAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFK 615
Query: 119 SREGKLFC 126
++ K +C
Sbjct: 616 EQKDKPYC 623
>gi|383850854|ref|XP_003700989.1| PREDICTED: protein apterous-like [Megachile rotundata]
Length = 620
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 64/130 (49%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 243 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR-- 300
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ SM CA C+ IL + ++ + +H C C C L+ D
Sbjct: 301 ----------MFGSMK-RCARCQAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHF 349
Query: 118 FSREGKLFCR 127
R+G + CR
Sbjct: 350 GMRDGAVLCR 359
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 243 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYY 299
>gi|281347117|gb|EFB22701.1| hypothetical protein PANDA_014076 [Ailuropoda melanoleuca]
Length = 369
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGESVYCKDDFFK---RF- 89
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 90 -----------GTKCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHAPLAERCFSRGESVYCKDDFF 86
>gi|296191171|ref|XP_002743509.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Callithrix
jacchus]
Length = 373
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 63
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 64 TKCAACQLGIPPTQVVRRA 82
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 59
>gi|402896089|ref|XP_003911140.1| PREDICTED: LIM/homeobox protein Lhx3 isoform 3 [Papio anubis]
Length = 373
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 63
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 64 TKCAACQLGIPPTQVVRRA 82
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 7 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 59
>gi|326205258|dbj|BAJ84011.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 386
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 54/79 (68%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 20 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 76
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 77 TKCAACQLGIPPTQVVRRA 95
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 45/62 (72%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G + + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++D
Sbjct: 11 GAPAPEIPLCAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDD 70
Query: 130 FF 131
FF
Sbjct: 71 FF 72
>gi|332018691|gb|EGI59263.1| Protein apterous [Acromyrmex echinatior]
Length = 558
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L +++ WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 182 VVCAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR-- 239
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ SM CA C+ IL + ++ E +H C C C L D
Sbjct: 240 ----------MFGSMK-RCARCQAAILASELVMRARELVFHVRCFSCAACAVLLMKGDHF 288
Query: 118 FSREGKLFCR 127
R+G + CR
Sbjct: 289 GMRDGAVLCR 298
Score = 58.5 bits (140), Expect = 7e-07, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L +++ WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 182 VVCAGCGLKISDRFYLQAVDKRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYY 238
>gi|348505058|ref|XP_003440078.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Oreochromis niloticus]
Length = 361
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 62/130 (47%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I D+FLL V + WH DCVRC C L++ CF R+ KL+C+ D+
Sbjct: 17 CAGCHRLIRDRFLLRVTDGLWHEDCVRCAACGDALTNSCFLRDRKLYCKRDY-------- 68
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCY--DCHHTLSDKCFSRE 121
+ + CAGC + I + ++ +H C C C D+C RE
Sbjct: 69 -------ADLFAVRCAGCTEAISPAELVMRAGAAVFHLRCFTCSVCSCRLQTGDRCVLRE 121
Query: 122 GKLFCRNDFF 131
G+L C + +
Sbjct: 122 GQLLCAREGY 131
>gi|444521209|gb|ELV13150.1| LIM/homeobox protein Lhx3 [Tupaia chinensis]
Length = 290
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 71/130 (54%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 32 CAGCDQHILDRFILKALDRHWHSQCLKCCDCHAPLAERCFSRGESVYCKDDFFK---RFG 88
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 89 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 136
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 137 DSRLVCKADY 146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 32 CAGCDQHILDRFILKALDRHWHSQCLKCCDCHAPLAERCFSRGESVYCKDDFF 84
>gi|242018119|ref|XP_002429528.1| Paxillin, putative [Pediculus humanus corporis]
gi|212514476|gb|EEB16790.1| Paxillin, putative [Pediculus humanus corporis]
Length = 530
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F REGK +CR D+F F
Sbjct: 356 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHEREGKPYCREDYFD---MF 411
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +PI++ + ++ L WH DC C DC F EG
Sbjct: 412 APKCG------------GCNRPIMENY-ISALNSQWHTDCFVCRDCRQPFQGGSFFDHEG 458
Query: 123 KLFCRNDF 130
+C +
Sbjct: 459 LPYCETHY 466
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ L +TWH + C C+ L + F R+G +C +D+ SP
Sbjct: 297 CNACDKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFERDGVPYCESDYHNLFSP- 354
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 355 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 397
Query: 121 EGKLFCRNDFF 131
EGK +CR D+F
Sbjct: 398 EGKPYCREDYF 408
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PI++ ++ + L WH DC C DC F EG +C +
Sbjct: 415 CGGCNRPIMENYI-SALNSQWHTDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 473
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + R +H + C C L+ F +
Sbjct: 474 ---------------CAGCHKPITGR-CITAMFRKFHPEHFVCAFCLKQLNKGTFKEQND 517
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 518 KPYCHGCF 525
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C C+KPI+ + ++ L +TWH + C C+ L + F R+G +C +
Sbjct: 288 GINTAQKGCCNACDKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFERDGVPYCES 346
Query: 129 DF 130
D+
Sbjct: 347 DY 348
>gi|345132129|gb|AEN75257.1| apterous [Neanthes arenaceodentata]
Length = 420
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I+D++ L +++ WH +C++C DCH L + CF+++G++FC+ D++R R
Sbjct: 61 CAGCGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGEIFCKEDYYR---R 117
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
F + C+ C + I ++ ++ E +H C C C L+ D
Sbjct: 118 FA-----------VKRCSRCHQAISANELVMRAREHVFHIGCFTCASCSKALTTGDYFGM 166
Query: 120 REGKLFCRNDF 130
++ ++CR+ +
Sbjct: 167 KDHLIYCRSHY 177
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 39/55 (70%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I+D++ L +++ WH +C++C DCH L + CF+++G++FC+ D++
Sbjct: 61 CAGCGGKIIDRYYLLAVDKQWHINCLKCADCHLPLDSELTCFAKDGEIFCKEDYY 115
>gi|195164650|ref|XP_002023159.1| GL21108 [Drosophila persimilis]
gi|194105244|gb|EDW27287.1| GL21108 [Drosophila persimilis]
Length = 639
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 447 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 500
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ + ++ L WH DC C DC + K F + EG
Sbjct: 501 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 549
Query: 123 KLFCRNDF 130
K CR F
Sbjct: 550 KPDCRQPF 557
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 388 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCETDYHNLFSP- 445
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 446 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 488
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 489 DGKPYCRNDYF 499
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 57/128 (44%), Gaps = 9/128 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDF----FRS 59
C GC + I++ ++ + L WH DC C DC + K F + EGK CR F F
Sbjct: 506 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEGKPDCRQPFQGGSFFD 564
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF- 118
P C + CAGC KPI + + + ++ +H + C C L+ F
Sbjct: 565 HEGLPY-CETHYHAKRGSLCAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFK 622
Query: 119 SREGKLFC 126
++ K +C
Sbjct: 623 EQKDKPYC 630
>gi|383863879|ref|XP_003707407.1| PREDICTED: paxillin-like [Megachile rotundata]
Length = 607
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 60/124 (48%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 397 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 452
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 453 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 499
Query: 123 KLFC 126
K C
Sbjct: 500 KPVC 503
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 338 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEPDYHNLFSP- 395
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 396 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 438
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 439 DGKPYCREDYF 449
Score = 42.4 bits (98), Expect = 0.066, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 329 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCEP 387
Query: 129 DF 130
D+
Sbjct: 388 DY 389
>gi|195012862|ref|XP_001983762.1| GH16074 [Drosophila grimshawi]
gi|193897244|gb|EDV96110.1| GH16074 [Drosophila grimshawi]
Length = 583
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 66/129 (51%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PI D++++ V++ ++H C++C C L C++R+GKL+CR D+ R +R
Sbjct: 236 CAYCCQPICDRYIMRVVDSSFHEGCLKCTACAQHLVHSCYARDGKLYCRLDYERLYLRN- 294
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C GC I D+ ++ E +H C C C L ++ ++
Sbjct: 295 -------------RCLGCGHKIAGDELVMRSQENIFHLKCFACVVCGALLKKGEQYVVKQ 341
Query: 122 GKLFCRNDF 130
G+LFCR D+
Sbjct: 342 GQLFCRFDY 350
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 42/65 (64%)
Query: 66 GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLF 125
G G ++ SM CA C +PI D++++ V++ ++H C++C C L C++R+GKL+
Sbjct: 223 GMGDTMALSMSNHCAYCCQPICDRYIMRVVDSSFHEGCLKCTACAQHLVHSCYARDGKLY 282
Query: 126 CRNDF 130
CR D+
Sbjct: 283 CRLDY 287
>gi|18308156|gb|AAL67847.1|AF461699_1 LIM homeobox protein [Gallus gallus]
Length = 214
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 22 SPEIPLCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 80
>gi|328787176|ref|XP_392622.4| PREDICTED: protein apterous [Apis mellifera]
Length = 560
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 186 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR-- 243
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ SM CA C IL + ++ + +H C C C L+ D
Sbjct: 244 ----------MFGSMK-RCARCHAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHF 292
Query: 118 FSREGKLFCR 127
R+G + CR
Sbjct: 293 GMRDGAVLCR 302
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 186 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYY 242
>gi|13516919|dbj|BAB40339.1| islet [Halocynthia roretzi]
Length = 432
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLER-TWHADCVRCYDC--HHTLSDKCFSREGKLFCRNDFFRSPV 61
C GC PI D+++L V WHA C++C DC H S CF R+GK +C+ D+
Sbjct: 25 CVGCGTPIQDQYMLRVAPNLEWHAGCLKCADCGLHLDESRTCFVRDGKTYCKQDYIMLFG 84
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ CG+G + + F++ + +H +C +C C L D+
Sbjct: 85 TKCNKCGLGFTK--------------NDFVMRARNKIYHIECFKCVACSKQLIPGDEFAL 130
Query: 120 REGKLFCRND 129
RE LFC+ D
Sbjct: 131 REDGLFCKAD 140
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVLER-TWHADCVRCYDC--HHTLSDKCFSREGKLFCRNDF 130
C GC PI D+++L V WHA C++C DC H S CF R+GK +C+ D+
Sbjct: 25 CVGCGTPIQDQYMLRVAPNLEWHAGCLKCADCGLHLDESRTCFVRDGKTYCKQDY 79
>gi|195440768|ref|XP_002068212.1| GK12807 [Drosophila willistoni]
gi|194164297|gb|EDW79198.1| GK12807 [Drosophila willistoni]
Length = 554
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 67/132 (50%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L C+ C +PI D++++ V++ ++H C++C C L C++++GKLFCR D+ R +
Sbjct: 205 LNQCSYCCQPICDRYIMRVVDNSFHESCLKCTACSLHLVHSCYAKDGKLFCRIDYERLYI 264
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R C GC I D+ ++ E +H C C C L ++
Sbjct: 265 RN--------------RCLGCGHKIAHDELVMRCHENVFHLKCFACVVCGSLLKKGEQYV 310
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 311 VKQGQLFCRFDY 322
>gi|431898999|gb|ELK07369.1| LIM/homeobox protein Lhx3 [Pteropus alecto]
Length = 357
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C+ DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKEDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C+ DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKEDFF 86
>gi|195376251|ref|XP_002046910.1| GJ12228 [Drosophila virilis]
gi|194154068|gb|EDW69252.1| GJ12228 [Drosophila virilis]
Length = 564
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L C C +PI D++++ V++ ++H C++C C L C++R+GKL+CR D+ R +
Sbjct: 211 LNQCTFCCQPICDRYIMRVVDNSFHEGCLKCTACSLHLVHSCYARDGKLYCRIDYERLYL 270
Query: 62 RFPSGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R C GC K D+ ++ E +H C C C L ++
Sbjct: 271 RN--------------RCLGCGHKIAADELVMRSQENIFHLKCFACVVCGALLKKGEQYV 316
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 317 VKQGQLFCRFDY 328
>gi|324516282|gb|ADY46481.1| Homeobox protein ceh-14 [Ascaris suum]
Length = 324
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 67/135 (49%), Gaps = 20/135 (14%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+L C CE+PI D++LL VL+R++H C+RC C L+ KC+ + G+ FC++ F++
Sbjct: 15 VLCVCGKCEEPIRDRYLLKVLDRSYHTQCLRCTHCEQPLTSKCYLKGGQPFCKDHFYK-- 72
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDK--- 116
RF + C V CE+ I D + + +H C +C C L
Sbjct: 73 -RFGTKCSV------------CEEGICPDSVVRRANDHVYHVACFQCVICKRELRTGEQF 119
Query: 117 -CFSREGKLFCRNDF 130
+G+L C+ D+
Sbjct: 120 YLIPTDGRLVCKTDY 134
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 39/57 (68%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+L C CE+PI D++LL VL+R++H C+RC C L+ KC+ + G+ FC++ F+
Sbjct: 15 VLCVCGKCEEPIRDRYLLKVLDRSYHTQCLRCTHCEQPLTSKCYLKGGQPFCKDHFY 71
>gi|350404757|ref|XP_003487210.1| PREDICTED: protein apterous-like [Bombus impatiens]
Length = 550
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 63/130 (48%), Gaps = 18/130 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 173 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYYR-- 230
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ SM CA C IL + ++ + +H C C C L+ D
Sbjct: 231 ----------MFGSMK-RCARCHAAILASELVMRARDLVFHVRCFSCAACAVPLTKGDHF 279
Query: 118 FSREGKLFCR 127
R+G + CR
Sbjct: 280 GMRDGAVLCR 289
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 173 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEVTCFSRDGNIYCKKDYY 229
>gi|410921390|ref|XP_003974166.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Takifugu
rubripes]
Length = 354
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 59/129 (45%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++PI D+FLL V + WH CVRC C L CF R KL+C+ D+
Sbjct: 7 CAGCQRPIRDRFLLRVTDCLWHEACVRCAACGDALKKSCFVRGRKLYCKQDYAELFAVHC 66
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCY--DCHHTLSDKCFSREG 122
GC +S + L+ AG +H C C C D+C REG
Sbjct: 67 GGCAEAISHTELVMRAGAA--------------VFHLHCFTCSVCSCRLQTGDRCVFREG 112
Query: 123 KLFC-RNDF 130
+L C R D+
Sbjct: 113 QLLCAREDY 121
>gi|195126142|ref|XP_002007533.1| GI12337 [Drosophila mojavensis]
gi|193919142|gb|EDW18009.1| GI12337 [Drosophila mojavensis]
Length = 586
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 17/132 (12%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L C C +PI D++++ V++ ++H C++C C L C++R+GKL+CR D+ R +
Sbjct: 227 LNQCTYCCQPICDRYIMRVVDNSFHEGCLKCSACSLHLVHSCYARDGKLYCRIDYERLYL 286
Query: 62 RFPSGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R C GC K D+ ++ E +H C C C L ++
Sbjct: 287 RN--------------RCLGCGHKIAADELVMRSQENIFHLKCFACVVCGAVLKKGEQYV 332
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 333 VKQGQLFCRFDY 344
>gi|440898169|gb|ELR49722.1| LIM homeobox transcription factor 1-beta [Bos grunniens mutus]
Length = 392
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 63/126 (50%), Gaps = 18/126 (14%)
Query: 8 CEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGC 67
CE+PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 49 CERPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY----------- 97
Query: 68 GVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKL 124
C+GC EK +F++ LE +H C C C L D+ +EG+L
Sbjct: 98 ----QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQL 153
Query: 125 FCRNDF 130
C+ D+
Sbjct: 154 LCKGDY 159
>gi|158292635|ref|XP_314022.4| AGAP005138-PA [Anopheles gambiae str. PEST]
gi|157017084|gb|EAA44525.4| AGAP005138-PA [Anopheles gambiae str. PEST]
Length = 456
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C C PI D++++ V++ T+H C++C C L CF R+GKL+CR D+ R R
Sbjct: 150 CGQCCGPICDRYIMKVVDITYHERCLQCTSCSIRLMHSCFMRDGKLYCRFDYERLYGRN- 208
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C GC EK D+ ++ L+ +H C C C L D+ ++
Sbjct: 209 -------------RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQ 255
Query: 122 GKLFCRNDF 130
+LFCR D+
Sbjct: 256 SQLFCRPDY 264
>gi|48375213|gb|AAT42259.1| LIM homeodomain protein Lmx1b.2 [Danio rerio]
Length = 375
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC +PI D+FLL + + +WH +C++C C L+ C+SR+ KL+C++D+
Sbjct: 33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK + ++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKTDY 146
>gi|68448499|ref|NP_001020339.1| LIM homeobox transcription factor 1, beta a [Danio rerio]
gi|62461839|gb|AAX83056.1| LIM homeodomain protein [Danio rerio]
gi|190337362|gb|AAI63321.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
gi|190339774|gb|AAI63333.1| LIM homeobox transcription factor 1, beta 2 [Danio rerio]
Length = 373
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC +PI D+FLL + + +WH +C++C C L+ C+SR+ KL+C++D+
Sbjct: 31 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDY-------- 82
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK + ++ LE +H C C C L D+ +E
Sbjct: 83 -------QQLFATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKE 135
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 136 GQLLCKTDY 144
>gi|195119850|ref|XP_002004442.1| GI19612 [Drosophila mojavensis]
gi|193909510|gb|EDW08377.1| GI19612 [Drosophila mojavensis]
Length = 485
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR-SPV 61
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 163 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 222
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 223 RRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQYGI 268
Query: 120 REGKLFCRNDF 130
+ ++CR +
Sbjct: 269 IDALIYCRTHY 279
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 163 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 217
>gi|195425678|ref|XP_002061119.1| apterous [Drosophila willistoni]
gi|27374312|gb|AAO01060.1| ap-PA [Drosophila willistoni]
gi|194157204|gb|EDW72105.1| apterous [Drosophila willistoni]
Length = 469
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR- 58
L CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 146 LDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSF 205
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 206 FGTRRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQ 251
Query: 117 CFSREGKLFCRNDF 130
+ ++CR +
Sbjct: 252 YGIIDALIYCRTHY 265
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
L CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 146 LDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 203
>gi|405971991|gb|EKC36790.1| LIM homeobox transcription factor 1-beta [Crassostrea gigas]
Length = 343
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C+ PI D+FLL V++ WH CV C C L+ CF R + +C+ND+ + R
Sbjct: 10 CASCQYPIEDRFLLRVMDLPWHEQCVVCSVCQTQLTRTCFHRNRQFYCKNDYDKLFRRAS 69
Query: 65 -SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
+GCG+ + I +F++ +H C C +C L D C ++
Sbjct: 70 CNGCGMFV--------------IPTEFVMRAKGYVYHQQCFNCIECGQQLRQGDHCAIKD 115
Query: 122 GKLFCRNDF 130
G+LFC DF
Sbjct: 116 GQLFCGIDF 124
>gi|125810912|ref|XP_001361667.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|195154388|ref|XP_002018104.1| GL16944 [Drosophila persimilis]
gi|27374288|gb|AAO01041.1| ap-PA [Drosophila pseudoobscura]
gi|54636843|gb|EAL26246.1| ap [Drosophila pseudoobscura pseudoobscura]
gi|194113900|gb|EDW35943.1| GL16944 [Drosophila persimilis]
Length = 469
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR- 58
L CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSF 204
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 205 FGTRRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQ 250
Query: 117 CFSREGKLFCRNDF 130
+ ++CR +
Sbjct: 251 YGIIDALIYCRTHY 264
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
P P ++ L CAGC + I D+F L+ +E+ WHA C++CY C L C
Sbjct: 129 PPSSPESTNDSKNTRNLDDCAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSC 188
Query: 118 FSREGKLFCRNDFF 131
+SR+G ++C+ND++
Sbjct: 189 YSRDGNIYCKNDYY 202
>gi|829167|emb|CAA38240.1| lin-11 protein [Caenorhabditis elegans]
gi|226840|prf||1608206A lin-11 gene
Length = 382
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFSR+G + C+ DF R R+
Sbjct: 45 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSR---RYS 101
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 102 Q------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 149
Query: 122 GKLF-CRNDF 130
G F C++DF
Sbjct: 150 GNRFVCQSDF 159
>gi|170035299|ref|XP_001845508.1| paxillin [Culex quinquefasciatus]
gi|167877158|gb|EDS40541.1| paxillin [Culex quinquefasciatus]
Length = 555
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 322 CNACDKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGNPYCETDYHNLFSP- 379
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C + F R
Sbjct: 380 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHER 422
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 423 DGKPYCRNDYF 433
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C + F R+GK +CRND+F
Sbjct: 381 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYF------ 433
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 434 ---------DMFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFFGGSFFDHEG 483
Query: 123 KLFCRNDF 130
+C +
Sbjct: 484 LPYCETHY 491
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 440 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFFGGSFFDHEGLPYCETHYHAKRGSL 498
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + ++ +H + C C L+ F +
Sbjct: 499 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQND 542
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 543 KPYCHQCF 550
>gi|118344350|ref|NP_001071998.1| transcription factor protein [Ciona intestinalis]
gi|70570117|dbj|BAE06539.1| transcription factor protein [Ciona intestinalis]
Length = 505
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/112 (31%), Positives = 54/112 (48%), Gaps = 18/112 (16%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVR 62
+ CAGC +PI DK+ + V +R+WH +CV+C C L + CF+++ KL+C+ D+
Sbjct: 51 VLCAGCRQPIYDKYYMWVDQRSWHEECVQCSVCRRPLVESCFTKDCKLYCQQDY------ 104
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL 113
L C C I D+ + V+ +H C C CH L
Sbjct: 105 -----------KQLQRCRRCAGVIPRDELVRRVIGHPYHVKCFSCDVCHRQL 145
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 38/54 (70%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
+ CAGC +PI DK+ + V +R+WH +CV+C C L + CF+++ KL+C+ D+
Sbjct: 51 VLCAGCRQPIYDKYYMWVDQRSWHEECVQCSVCRRPLVESCFTKDCKLYCQQDY 104
>gi|443696308|gb|ELT97041.1| hypothetical protein CAPTEDRAFT_43751, partial [Capitella teleta]
Length = 271
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC + I D++ L +ER WHA+C+RC C L + C++R+G +FC+ D++R +
Sbjct: 2 CAGCGEKITDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDYYRLFAI 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ SGC + +S++ L+ + + +H +C C CH L +
Sbjct: 62 KRCSGCHLAISANELV--------------MKARDSVYHMNCFTCASCHKLLITGEHFGM 107
Query: 120 REGKLFCRNDF 130
+E ++CR +
Sbjct: 108 KENLIYCRMHY 118
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC + I D++ L +ER WHA+C+RC C L + C++R+G +FC+ D++
Sbjct: 2 CAGCGEKITDRYYLQAVERAWHANCLRCAQCKLPLDSEVTCYARDGSIFCKEDYY 56
>gi|195402627|ref|XP_002059906.1| apterous [Drosophila virilis]
gi|27374202|gb|AAN87274.1| ap [Drosophila virilis]
gi|194140772|gb|EDW57243.1| apterous [Drosophila virilis]
Length = 472
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR-SPV 61
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 210 RRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQYGI 255
Query: 120 REGKLFCRNDF 130
+ ++CR +
Sbjct: 256 IDALIYCRTHY 266
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 204
>gi|195353746|ref|XP_002043364.1| GM16501 [Drosophila sechellia]
gi|194127487|gb|EDW49530.1| GM16501 [Drosophila sechellia]
Length = 535
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 66/134 (49%), Gaps = 19/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR- 58
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 211 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSF 270
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 271 FGTRRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQ 316
Query: 117 CFSREGKLFCRNDF 130
+ ++CR +
Sbjct: 317 YGIIDALIYCRTHY 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 211 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 268
>gi|195027475|ref|XP_001986608.1| GH20430 [Drosophila grimshawi]
gi|193902608|gb|EDW01475.1| GH20430 [Drosophila grimshawi]
Length = 469
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR-SPV 61
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSFFGT 207
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R S C +SS+ L+ + +H +C C CH L+ D+
Sbjct: 208 RRCSRCLASISSNELV--------------MRARNLVFHVNCFCCTVCHTPLTKGDQYGI 253
Query: 120 REGKLFCRNDF 130
+ ++CR +
Sbjct: 254 IDALIYCRTHY 264
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 148 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>gi|383861320|ref|XP_003706134.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Megachile
rotundata]
Length = 402
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I DK+++ V R +H +C+ C C L+ CF RE K +CR D+ R
Sbjct: 58 CAGCGRTISDKYVMQVAGRNYHEECLSCAACAAPLTQSCFIRELKFYCRTDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
+ CA C EK F+L +H +C C C L + F R+
Sbjct: 112 ---------IFGVKCARCMEKISCSDFVLRTPGLVFHVECFACCMCGQPLPPGTQYFLRQ 162
Query: 122 GKLFCRNDF 130
G+ CR D+
Sbjct: 163 GQPICRRDY 171
>gi|341889206|gb|EGT45141.1| CBN-LIN-11 protein [Caenorhabditis brenneri]
Length = 372
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 68/130 (52%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C++D+ R R+
Sbjct: 75 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKSDYSR---RYG 131
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 132 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 179
Query: 122 GKLF-CRNDF 130
G F C+NDF
Sbjct: 180 GNRFMCQNDF 189
>gi|143347423|gb|ABO93221.1| Islet [Platynereis dumerilii]
Length = 414
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C DC L + CF REGK +C+ D+ R
Sbjct: 22 CVGCGSKIQDQYILRVAPDLEWHAACLKCADCDQFLDETCTCFVREGKTYCKRDYAR--- 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
CA C + + F++ + +H DC RC C L D+
Sbjct: 79 ------------LFGTKCARCTESFSKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFA 126
Query: 119 SREGKLFCRND 129
R+ LFC++D
Sbjct: 127 LRDDGLFCKSD 137
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C DC L + C F REGK +C+ D+
Sbjct: 22 CVGCGSKIQDQYILRVAPDLEWHAACLKCADCDQFLDETCTCFVREGKTYCKRDY 76
>gi|312103264|ref|XP_003150115.1| homeobox protein Lim-1 [Loa loa]
Length = 90
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
++ CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R G + CR DF R
Sbjct: 33 VMAICAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDFAR 90
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 39/56 (69%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
++ CAGC ILD+++ +VLE+ WHA C++C DC LS+ CF+R G + CR DF
Sbjct: 33 VMAICAGCNNAILDRYVFHVLEKAWHATCIQCADCKALLSETCFTRNGLILCRKDF 88
>gi|195432836|ref|XP_002064422.1| GK23838 [Drosophila willistoni]
gi|194160507|gb|EDW75408.1| GK23838 [Drosophila willistoni]
Length = 630
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + LE+TWH + C C ++ F R+GK +CRND+F
Sbjct: 433 CAYCNGAILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 486
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ + ++ L WH DC C DC + K F + EG
Sbjct: 487 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 535
Query: 123 KLFC 126
K C
Sbjct: 536 KPVC 539
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 374 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCQQELGTRNFFERDGFPYCEPDYHNLFSP- 431
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + LE+TWH + C C ++ F R
Sbjct: 432 ----------------RCAYCNGAILDK-CVTALEKTWHTEHFFCAQCGQQFGEEGFHER 474
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 475 DGKPYCRNDYF 485
Score = 49.3 bits (116), Expect = 6e-04, Method: Composition-based stats.
Identities = 37/136 (27%), Positives = 58/136 (42%), Gaps = 12/136 (8%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC + K F + EGK C R P +
Sbjct: 492 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEGKPVCPQCDCRQPFQG 550
Query: 64 PS--------GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
S C + CAGC KPI + + + ++ +H + C C L+
Sbjct: 551 GSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNK 609
Query: 116 KCF-SREGKLFCRNDF 130
F ++ K +C F
Sbjct: 610 GTFKEQKDKPYCHACF 625
>gi|170032117|ref|XP_001843929.1| lim homeobox protein [Culex quinquefasciatus]
gi|167871878|gb|EDS35261.1| lim homeobox protein [Culex quinquefasciatus]
Length = 453
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 64/129 (49%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C C PI D++++ V++ ++H +C++C C L CF R+GKL+CR D+ R R
Sbjct: 6 CGQCCSPICDRYIMKVVDISYHENCLQCTSCAIRLMHSCFMRDGKLYCRFDYERLYGRN- 64
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C GC EK D+ ++ L+ +H C C C L D+ ++
Sbjct: 65 -------------RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGIRLQKGDQYVIKQ 111
Query: 122 GKLFCRNDF 130
+LFCR D+
Sbjct: 112 SQLFCRPDY 120
>gi|153791607|ref|NP_001093351.1| PDZ and LIM domain 5 [Xenopus laevis]
gi|148744502|gb|AAI42561.1| LOC100101292 protein [Xenopus laevis]
Length = 582
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C++ IL + ++N L++TWH C C CH+ + + F E G+ +C D++
Sbjct: 465 CARCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNSVFHLEDGEPYCETDYY------ 517
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
S C GCE PI D+F L L TWH C C C L + FS+
Sbjct: 518 ---------SLFGTICHGCEFPIEAGDRF-LEALGHTWHNTCFVCTICCENLEGQAFFSK 567
Query: 121 EGKLFCR 127
+ KL C+
Sbjct: 568 KEKLLCK 574
>gi|190343829|gb|ACE75737.1| paxillin [Hirudo medicinalis]
Length = 449
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 58/129 (44%), Gaps = 19/129 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
CA C PILDK + L++TWH + CY C L D F ++G +FCR +F+
Sbjct: 274 QCAQCHGPILDK-CVTALDKTWHPEHFVCYSCGKELGDVGFHEKDGLVFCRTYYFQ---- 328
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSRE 121
C C KPI++ F + L + WH C C+DCH S F E
Sbjct: 329 -----------HFAPKCVMCNKPIVENF-ITALNQQWHPKCFACFDCHKPFGSSSFFEHE 376
Query: 122 GKLFCRNDF 130
G +C F
Sbjct: 377 GFPYCETHF 385
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDF--FRSPV 61
CAGC K I+ + ++ L R WH + C C + + F R+G +C ND+ SP
Sbjct: 216 CAGCAKLIVGQ-VITALGRLWHPEHFVCAQCKEEIGTQNFFERDGMPYCENDYHILFSP- 273
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + L++TWH + CY C L D F +
Sbjct: 274 ----------------QCAQCHGPILDK-CVTALDKTWHPEHFVCYSCGKELGDVGFHEK 316
Query: 121 EGKLFCRNDFF 131
+G +FCR +F
Sbjct: 317 DGLVFCRTYYF 327
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C KPI++ F+ L + WH C C+DCH S F EG +C F
Sbjct: 334 CVMCNKPIVENFI-TALNQQWHPKCFACFDCHKPFGSSSFFEHEGFPYCETHFHAKRGSL 392
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CA C KP+ + + + R +H D C C LS F E
Sbjct: 393 ---------------CAYCGKPVSGR-CITAMFRKFHPDHFMCTYCQKQLSKGTFKEEND 436
Query: 123 KLFCRN 128
K +C +
Sbjct: 437 KPYCHS 442
>gi|224058880|ref|XP_002190501.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Taeniopygia
guttata]
Length = 379
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 33 CEGCQRVILDRFLLRLNDSLWHEQCVQCASCKEPLQTTCFYRDKKLYCKLDYEK------ 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CAGC +PI + ++ + +H C C C L D+ +E
Sbjct: 87 ---------LFAVKCAGCLEPIAPSELVMRAQKSVYHLHCFCCCVCERRLQKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>gi|301605176|ref|XP_002932201.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 398
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 131
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TLS D
Sbjct: 132 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLSTGDHFGM 177
Query: 120 REGKLFCRNDF 130
+E ++CR F
Sbjct: 178 KENLVYCRIHF 188
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 126
>gi|432856535|ref|XP_004068463.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Oryzias
latipes]
Length = 348
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVR 62
+ C GC++ I D+FLL V + WH CVRC C L + CF E KL+C+ D+
Sbjct: 14 VVCVGCQRRITDRFLLRVADGLWHERCVRCAACGDALRNSCFLLERKLYCKRDY------ 67
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
SS + C GC + I + ++ +H C C C H L D+C
Sbjct: 68 ---------SSLFAVHCGGCAEAISPSELVMRAGAAVFHLSCFTCSVCFHHLKTGDRCIL 118
Query: 120 REGKLFC-RNDF 130
++G+L C R D+
Sbjct: 119 QDGRLLCAREDY 130
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
+ L + + C GC++ I D+FLL V + WH CVRC C L + CF E KL+C+
Sbjct: 5 ALSLDAHHWVVCVGCQRRITDRFLLRVADGLWHERCVRCAACGDALRNSCFLLERKLYCK 64
Query: 128 NDF 130
D+
Sbjct: 65 RDY 67
>gi|405961382|gb|EKC27193.1| LIM/homeobox protein Lhx9 [Crassostrea gigas]
Length = 415
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 70/131 (53%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH +C++C +C L + CF+R+G ++C+ D++R V
Sbjct: 62 CAGCGSRIFDRYYLMAVDKQWHVNCLKCCECKIGLDSELTCFARDGNIYCKEDYYRRYAV 121
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C G++++ L+ + + +H +C C C+ TL+ D+
Sbjct: 122 KRCTRCHQGITANELV--------------MRAKDLVFHINCFTCASCNKTLTTGDQFGM 167
Query: 120 REGKLFCRNDF 130
++ ++CR D+
Sbjct: 168 QDDLIYCRTDY 178
Score = 55.1 bits (131), Expect = 8e-06, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH +C++C +C L + CF+R+G ++C+ D++
Sbjct: 62 CAGCGSRIFDRYYLMAVDKQWHVNCLKCCECKIGLDSELTCFARDGNIYCKEDYY 116
>gi|449269080|gb|EMC79889.1| LIM/homeobox protein Lhx3, partial [Columba livia]
Length = 342
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 41/54 (75%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK 57
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 4 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 56
>gi|71896681|ref|NP_001026320.1| PDZ and LIM domain protein 5 [Gallus gallus]
gi|60098985|emb|CAH65323.1| hypothetical protein RCJMB04_18a15 [Gallus gallus]
Length = 595
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C+ C++ IL + ++N L++TWH C C CH+ + + F E G +C D++
Sbjct: 478 CSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYY------ 530
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
L +M C GCE PI D+F L L TWH C C C+ +L + FS+
Sbjct: 531 ------ALFGTM---CHGCEFPIEAGDRF-LEALGHTWHDTCFVCSVCNDSLEGQTFFSK 580
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 581 KDKPLCK 587
>gi|157130106|ref|XP_001655563.1| paxillin, putative [Aedes aegypti]
gi|108884446|gb|EAT48671.1| AAEL000339-PA [Aedes aegypti]
Length = 481
Score = 69.3 bits (168), Expect = 4e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ L +TWH + C C+ L + F R+G +C +D+ SP
Sbjct: 248 CNACDKPIVGQ-VITALGKTWHPEHFTCNHCNQELGTRNFFERDGNPYCESDYHNLFSP- 305
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C + F R
Sbjct: 306 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHER 348
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 349 DGKPYCRNDYF 359
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C + F R+GK +CRND+F
Sbjct: 307 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYF------ 359
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 360 ---------DMFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFFGGSFFDHEG 409
Query: 123 KLFCRNDF 130
+C +
Sbjct: 410 LPYCETHY 417
Score = 43.1 bits (100), Expect = 0.038, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 366 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFFGGSFFDHEGLPYCETHYHAKRGSL 424
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + ++ +H + C C L+ F +
Sbjct: 425 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQND 468
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 469 KPYCHQCF 476
>gi|326205260|dbj|BAJ84012.1| LIM/homeobox protein Lhx3 [Homo sapiens]
Length = 89
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 43/54 (79%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK 89
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 88
>gi|195580147|ref|XP_002079917.1| GD21763 [Drosophila simulans]
gi|194191926|gb|EDX05502.1| GD21763 [Drosophila simulans]
Length = 678
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEM---- 461
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ ++ + L WH DC C DC + K F + EG
Sbjct: 462 -----------FAPKCNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 509
Query: 123 KLFC 126
K C
Sbjct: 510 KPVC 513
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
>gi|358335730|dbj|GAA54362.1| LIM domain transcription factor LMO4-B [Clonorchis sinensis]
Length = 303
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 64/136 (47%), Gaps = 19/136 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCH---HTLSDKCFSREGKLFCRNDFF 57
M I CAGC PI+++ LLN L+R WH C+ C C L F R L CR D+
Sbjct: 1 MAIVCAGCGDPIVERTLLNALDRFWHTGCLNCSCCGLRLDELGPSVFVRSDMLLCRQDYL 60
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS-- 114
R GLS +CA C + I D+ ++ E +H C C+ CH L+
Sbjct: 61 RL---------FGLSG----TCAKCRQKIPPDELVMRCQESVYHVRCFCCFHCHAQLNPG 107
Query: 115 DKCFSREGKLFCRNDF 130
DK EG LFC +F
Sbjct: 108 DKVCLVEGNLFCELEF 123
>gi|156390719|ref|XP_001635417.1| predicted protein [Nematostella vectensis]
gi|156222511|gb|EDO43354.1| predicted protein [Nematostella vectensis]
Length = 253
Score = 68.9 bits (167), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 70/131 (53%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC IL++F L +++ WHADC++C DC L ++ CFS++G + CR D++R R
Sbjct: 9 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYYR---R 65
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDK-FLLNVLERTWHADCVRCYDCHHTL-SDKCFSR 120
F + C+ C + I K ++ ++ +H +C C C L + + F
Sbjct: 66 FS-----------VKKCSSCSQAISSKELVMRARDQVYHVNCFACDRCKRMLATGEYFGM 114
Query: 121 EG-KLFCRNDF 130
G +++C+ D+
Sbjct: 115 RGIRIYCKEDY 125
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC IL++F L +++ WHADC++C DC L ++ CFS++G + CR D++
Sbjct: 9 CAGCGSRILERFYLMAVDQEWHADCLKCSDCELRLDNELTCFSKDGVILCREDYY 63
>gi|431921900|gb|ELK19103.1| LIM/homeobox protein Lhx9 [Pteropus alecto]
Length = 479
Score = 68.9 bits (167), Expect = 5e-10, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 153 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 212
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 213 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 258
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 259 KDSLVYCRAHF 269
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 153 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 207
>gi|258504101|gb|ACV72756.1| LIN-11 [Caenorhabditis remanei]
gi|258504105|gb|ACV72758.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C+ D+ R R+
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDYSR---RYG 119
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 120 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 167
Query: 122 GKLF-CRNDF 130
G F C+NDF
Sbjct: 168 GNRFMCQNDF 177
>gi|258504095|gb|ACV72753.1| LIN-11 [Caenorhabditis remanei]
gi|258504097|gb|ACV72754.1| LIN-11 [Caenorhabditis remanei]
gi|258504103|gb|ACV72757.1| LIN-11 [Caenorhabditis remanei]
gi|258504107|gb|ACV72759.1| LIN-11 [Caenorhabditis remanei]
gi|258504109|gb|ACV72760.1| LIN-11 [Caenorhabditis remanei]
gi|258504111|gb|ACV72761.1| LIN-11 [Caenorhabditis remanei]
gi|258504117|gb|ACV72764.1| LIN-11 [Caenorhabditis remanei]
gi|258504119|gb|ACV72765.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C+ D+ R R+
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDYSR---RYG 119
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 120 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 167
Query: 122 GKLF-CRNDF 130
G F C+NDF
Sbjct: 168 GNRFMCQNDF 177
>gi|299115102|dbj|BAJ09782.1| apterous 1 [Daphnia magna]
Length = 468
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFR-SPV 61
C GC I D++ L +ER WH++C+RC +C L CFSR+ +++CR+D++R V
Sbjct: 7 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDYYRLFGV 66
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R + C + L S+ L+ + + +H C C C+ L+ D
Sbjct: 67 RRCNRCCLPLGSNELV--------------MRARDAVFHLACFTCAACNQPLTKGDIFGM 112
Query: 120 REGKLFCR 127
R+G ++CR
Sbjct: 113 RDGIVYCR 120
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 131
C GC I D++ L +ER WH++C+RC +C L CFSR+ +++CR+D++
Sbjct: 7 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDYY 61
>gi|260829945|ref|XP_002609922.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
gi|229295284|gb|EEN65932.1| LIM class homeodomain transcription factor, islet subclass
[Branchiostoma floridae]
Length = 430
Score = 68.9 bits (167), Expect = 6e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C DC+ L + CF REGK +C+ + R
Sbjct: 26 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCYVRLFG 85
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G + + F++ + +H DC RC C L D+
Sbjct: 86 TKCAKCSLGFTK--------------NDFVMRARNKIYHIDCFRCVACSRQLIPGDEFAL 131
Query: 120 REGKLFCRND 129
RE LFC+ D
Sbjct: 132 REDGLFCKAD 141
>gi|312372729|gb|EFR20625.1| hypothetical protein AND_19782 [Anopheles darlingi]
Length = 286
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C+ C+KPI+ + ++ L +TWH + C C+ L + F R+G +C D+ SP
Sbjct: 111 CSACDKPIVGQ-VITALGKTWHPEHFTCNHCNQELGTRNFFERDGNPYCEPDYHNLFSP- 168
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C + F R
Sbjct: 169 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHER 211
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 212 DGKPYCRNDYF 222
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C + F R+GK +CRND+F
Sbjct: 170 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYF------ 222
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ ++ + L WH DC C DC ++ K F + EG
Sbjct: 223 ---------DMFAPKCNGCNRAIMENYI-SALNSQWHPDCFVCRDCSKPVTGKSFYAMEG 272
Query: 123 KLFC 126
K C
Sbjct: 273 KPVC 276
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G++++ C+ C+KPI+ + ++ L +TWH + C C+ L + F R+G +C
Sbjct: 102 GVNTTQKGCCSACDKPIVGQ-VITALGKTWHPEHFTCNHCNQELGTRNFFERDGNPYCEP 160
Query: 129 DF 130
D+
Sbjct: 161 DY 162
>gi|258504089|gb|ACV72750.1| LIN-11 [Caenorhabditis remanei]
gi|258504091|gb|ACV72751.1| LIN-11 [Caenorhabditis remanei]
gi|258504093|gb|ACV72752.1| LIN-11 [Caenorhabditis remanei]
gi|258504099|gb|ACV72755.1| LIN-11 [Caenorhabditis remanei]
gi|258504113|gb|ACV72762.1| LIN-11 [Caenorhabditis remanei]
gi|258504115|gb|ACV72763.1| LIN-11 [Caenorhabditis remanei]
Length = 383
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 67/130 (51%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFS++G + C+ D+ R R+
Sbjct: 63 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSKDGLILCKTDYSR---RYG 119
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL-NVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 120 H------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 167
Query: 122 GKLF-CRNDF 130
G F C+NDF
Sbjct: 168 GNRFMCQNDF 177
>gi|345317972|ref|XP_003429957.1| PREDICTED: hypothetical protein LOC100681317 [Ornithorhynchus
anatinus]
Length = 217
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
VG + CAGC + I+D+F+L VL+R WH C++C DC L++KCFSR ++C+
Sbjct: 154 VGQGPLEIPLCAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQTPLTEKCFSRGDSVYCKE 213
Query: 129 DFF 131
DFF
Sbjct: 214 DFF 216
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 40/54 (74%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC + I+D+F+L VL+R WH C++C DC L++KCFSR ++C+ DFF+
Sbjct: 164 CAGCNQHIVDRFILKVLDRHWHGKCLKCSDCQTPLTEKCFSRGDSVYCKEDFFK 217
>gi|256071672|ref|XP_002572163.1| lim-only [Schistosoma mansoni]
gi|353229928|emb|CCD76099.1| putative lim-only [Schistosoma mansoni]
Length = 294
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCH---HTLSDKCFSREGKLFCRNDFF 57
M ISCAGC PI++K LLN ++R WH C+ C C L F R L CR D+
Sbjct: 1 MSISCAGCGGPIVEKTLLNAIDRFWHTSCLNCSCCGLRLDELGPSVFVRSNMLLCRQDYL 60
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--S 114
+ GLS +CA C I D+ ++ ++ +H +C C CH L
Sbjct: 61 KL---------FGLSG----TCAKCRVQIPPDELVMRCQDKVYHVNCFCCTHCHSPLHPG 107
Query: 115 DKCFSREGKLFCRNDF 130
DK +G LFC ++F
Sbjct: 108 DKVCFMDGNLFCEHEF 123
>gi|427796941|gb|JAA63922.1| Putative paxillin, partial [Rhipicephalus pulchellus]
Length = 633
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + L++TWH + C C + F ++GK +CR+D+F F
Sbjct: 459 CAYCNGPILDK-CVTALDKTWHPEHFFCAHCGTQFGEGGFHEKDGKPYCRDDYFE---LF 514
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC +PI + + ++ L WH +C C DC + F EG
Sbjct: 515 APKCG------------GCNRPITENY-ISALNGQWHPECFVCRDCRQPFNGGSFYDHEG 561
Query: 123 KLFCRNDF 130
+ FC +
Sbjct: 562 QPFCETHY 569
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ C KPI+ + ++ L RTWH + C C+ L K F R+ + +C D+ SP
Sbjct: 400 CSACSKPIVGQ-VVTALGRTWHPEHFVCAHCNQELGTKNFFERDNEPYCETDYHNIFSP- 457
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + L++TWH + C C + F +
Sbjct: 458 ----------------RCAYCNGPILDK-CVTALDKTWHPEHFFCAHCGTQFGEGGFHEK 500
Query: 121 EGKLFCRNDFF 131
+GK +CR+D+F
Sbjct: 501 DGKPYCRDDYF 511
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC +PI + ++ + L WH +C C DC + F EG+ FC +
Sbjct: 518 CGGCNRPITENYI-SALNGQWHPECFVCRDCRQPFNGGSFYDHEGQPFCETHYHAKRGSL 576
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + R +H + C C L+ F +
Sbjct: 577 ---------------CAGCHKPITGR-CITAMFRKYHPEHFVCAFCLGQLNKGTFKEQND 620
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 621 KPYCHACF 628
>gi|189503044|gb|ACE06903.1| unknown [Schistosoma japonicum]
gi|226469222|emb|CAX70090.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
gi|226469224|emb|CAX70091.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
gi|226469226|emb|CAX70092.1| LIM domain transcription factor LMO4 [Schistosoma japonicum]
Length = 291
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 65/136 (47%), Gaps = 19/136 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCH---HTLSDKCFSREGKLFCRNDFF 57
M ISCAGC PI++K LLN ++R WH C+ C C L F R L CR D+
Sbjct: 1 MSISCAGCGGPIVEKTLLNAIDRFWHTTCLNCSCCGLRLDELGPSVFVRSNMLLCRQDYL 60
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--S 114
+ GLS +CA C I D+ ++ ++ +H +C C CH L
Sbjct: 61 KL---------FGLSG----TCAKCRVQIPPDELVMRCQDKVYHVNCFCCTHCHSPLHPG 107
Query: 115 DKCFSREGKLFCRNDF 130
DK +G LFC ++F
Sbjct: 108 DKVCFMDGNLFCEHEF 123
>gi|339252326|ref|XP_003371386.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
gi|316968365|gb|EFV52646.1| LIM/homeobox protein Lhx1 [Trichinella spiralis]
Length = 309
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 40/54 (74%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC+KPI D++L +V++++WH C+ C C L D+CF+R+G +FC+ DF +
Sbjct: 12 CAGCKKPIYDRYLYHVMDKSWHGSCIVCEVCQTPLDDRCFTRDGLIFCKTDFLK 65
>gi|6572499|gb|AAF17291.1| LHX3 protein [Homo sapiens]
gi|6572501|gb|AAF17292.1| LHX3 protein [Homo sapiens]
Length = 370
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 53/79 (67%), Gaps = 6/79 (7%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAG ++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 4 CAGRDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 60
Query: 65 S---GCGVGLSSSMLISCA 80
+ C +G+ + ++ A
Sbjct: 61 TKCAACQLGIPPTQVVRRA 79
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAG ++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 4 CAGRDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFF 56
>gi|224493175|sp|Q90881.2|LHX9_CHICK RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRAHF 187
Score = 52.0 bits (123), Expect = 7e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|29841053|gb|AAP06066.1| similar to NM_006769 LIM domain only 4 in Homo sapiens [Schistosoma
japonicum]
Length = 291
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 57
M ISCAGC PI++K LLN ++R WH C+ C C L + F R L CR D+
Sbjct: 1 MSISCAGCGGPIVEKTLLNAIDRFWHTTCLNCSCCGLRLDEFGPSVFVRSNMLLCRQDYL 60
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--S 114
+ GLS +CA C I D+ ++ ++ +H +C C CH L
Sbjct: 61 KL---------FGLSG----TCAKCRVQIPPDELVMRCQDKVYHVNCFCCTHCHSPLHPG 107
Query: 115 DKCFSREGKLFCRNDF 130
DK +G LFC ++F
Sbjct: 108 DKVCFMDGNLFCEHEF 123
>gi|291240630|ref|XP_002740222.1| PREDICTED: LIM domain only 4-like [Saccoglossus kowalevskii]
Length = 180
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I+D+FLL+ L+R WH C++C C L + CFS+ G + C+ D+ R
Sbjct: 42 SCAGCGVKIMDRFLLHALDRYWHTGCLKCTCCGAQLGELGPSCFSKGGMILCKKDYLR-- 99
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ SG +C+ C + I + ++ +H C C CH+ L D+
Sbjct: 100 LFGNSG-----------ACSSCGQSIPASELVMRAQGNVYHQKCFACTSCHNQLVPGDRF 148
Query: 118 FSREGKLFCRND 129
G LFC D
Sbjct: 149 LIVNGNLFCETD 160
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
SCAGC I+D+FLL+ L+R WH C++C C L + CFS+ G + C+ D+
Sbjct: 42 SCAGCGVKIMDRFLLHALDRYWHTGCLKCTCCGAQLGELGPSCFSKGGMILCKKDYL 98
>gi|332220030|ref|XP_003259160.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha [Nomascus leucogenys]
Length = 368
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|443704461|gb|ELU01523.1| hypothetical protein CAPTEDRAFT_46615, partial [Capitella teleta]
Length = 122
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 19/133 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
CAGC I+D+FLL+ ++R WH C++C C L + CF++ G + C+ D+ R
Sbjct: 2 QCAGCGGKIIDRFLLHAMDRYWHTGCLKCSCCQAQLGELGTSCFTKSGMILCKRDYIR-- 59
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
F S +CA C + I +F++ +H C C CH L D+
Sbjct: 60 -LFGS----------TGTCAACSQAIPASEFVMKAQGNVYHVHCFTCVTCHSRLVPGDRY 108
Query: 118 FSREGKLFCRNDF 130
G L C +DF
Sbjct: 109 GIINGSLICEHDF 121
>gi|395825137|ref|XP_003785798.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Otolemur
garnettii]
Length = 382
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|6980082|gb|AAF34717.1|AF226616_1 LIM-homeodomain transcription factor islet [Branchiostoma floridae]
Length = 419
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C DC+ L + CF REGK +C+ + R
Sbjct: 15 CVGCGSHIHDQYILRVAPDLEWHAACLKCSDCNQYLDETCTCFVREGKTYCKRCYVRLFG 74
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G + + F++ + +H DC RC C L D+
Sbjct: 75 TKCAKCSLGFTK--------------NDFVMRAKNKIYHIDCFRCVACSRQLIPGDEFAL 120
Query: 120 REGKLFCRND 129
RE LFC+ D
Sbjct: 121 REDGLFCKAD 130
>gi|301615074|ref|XP_002937009.1| PREDICTED: LIM/homeobox protein Lhx4-like [Xenopus (Silurana)
tropicalis]
Length = 385
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C+GC + ILDKF+L VL+R WH+ C++C +C L+++CF R G ++C+ DFF+
Sbjct: 39 CSGCNEHILDKFILKVLDRHWHSACLKCCECQVPLAERCFYRAGNVYCKEDFFKCFGTKC 98
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
+ C G+ + ++ A + +H C C C L+ D+ + E
Sbjct: 99 TACQQGIPPTQVVRKA--------------QDFVYHLHCFSCIICSRQLATGDEFYLMED 144
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 145 GRLVCKEDY 153
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G + C+GC + ILDKF+L VL+R WH+ C++C +C L+++CF R G ++C+ D
Sbjct: 30 GAMPKEIPRCSGCNEHILDKFILKVLDRHWHSACLKCCECQVPLAERCFYRAGNVYCKED 89
Query: 130 FF 131
FF
Sbjct: 90 FF 91
>gi|403272543|ref|XP_003928115.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Saimiri boliviensis boliviensis]
gi|403272545|ref|XP_003928116.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Saimiri boliviensis boliviensis]
Length = 382
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|393912072|gb|EFO23845.2| hypothetical protein LOAG_04639 [Loa loa]
Length = 319
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C++ F++ RF
Sbjct: 11 CGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFYK---RFG 67
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDK----CFS 119
+ C + C++ I D + E +H C +C C L
Sbjct: 68 TKCSM------------CDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIP 115
Query: 120 REGKLFCRNDF 130
+G+L C++D+
Sbjct: 116 TDGRLVCKSDY 126
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C++ F+
Sbjct: 5 SGTVYLCGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFY 63
>gi|28893581|ref|NP_796372.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|291327513|ref|NP_001167540.1| LIM homeobox transcription factor 1-alpha [Homo sapiens]
gi|109019319|ref|XP_001084612.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Macaca mulatta]
gi|109019321|ref|XP_001084727.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3
[Macaca mulatta]
gi|114561083|ref|XP_001174539.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
troglodytes]
gi|114561085|ref|XP_001174542.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 3 [Pan
troglodytes]
gi|296229940|ref|XP_002760489.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Callithrix
jacchus]
gi|397508364|ref|XP_003824628.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1 [Pan
paniscus]
gi|397508366|ref|XP_003824629.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2 [Pan
paniscus]
gi|402858034|ref|XP_003893535.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Papio anubis]
gi|402858036|ref|XP_003893536.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Papio anubis]
gi|426332555|ref|XP_004027869.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 1
[Gorilla gorilla gorilla]
gi|426332557|ref|XP_004027870.1| PREDICTED: LIM homeobox transcription factor 1-alpha isoform 2
[Gorilla gorilla gorilla]
gi|27923801|sp|Q8TE12.1|LMX1A_HUMAN RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|19879681|gb|AAL82892.1| LIM homeobox transcription factor 1 alpha [Homo sapiens]
gi|119611150|gb|EAW90744.1| LIM homeobox transcription factor 1, alpha, isoform CRA_b [Homo
sapiens]
gi|182887815|gb|AAI60062.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|193785405|dbj|BAG54558.1| unnamed protein product [Homo sapiens]
gi|208966672|dbj|BAG73350.1| LIM homeobox transcription factor 1, alpha [synthetic construct]
gi|355558990|gb|EHH15770.1| hypothetical protein EGK_01906 [Macaca mulatta]
gi|355746154|gb|EHH50779.1| hypothetical protein EGM_01656 [Macaca fascicularis]
Length = 382
Score = 68.2 bits (165), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 63/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|327289984|ref|XP_003229704.1| PREDICTED: LIM domain kinase 1-like, partial [Anolis carolinensis]
Length = 1133
Score = 68.2 bits (165), Expect = 9e-10, Method: Composition-based stats.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 18/125 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C I D L L WHADC RC +C +LS + + ++G+L+C+ D++
Sbjct: 519 CASCSHSIYDGQYLQALNADWHADCFRCSECGTSLSHQYYEKDGRLYCKKDYW------- 571
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
+ C GC + I ++ E+ +H +C C +C + D
Sbjct: 572 --------AHFGEMCHGCSEQITKGLVMVAGEQKYHPECFSCLNCRVFIGDGDTYALVER 623
Query: 122 GKLFC 126
KL+C
Sbjct: 624 SKLYC 628
>gi|259013283|ref|NP_001158443.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
gi|197320559|gb|ACH68441.1| lim homeobox 2/9 protein [Saccoglossus kowalevskii]
Length = 402
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC ILD++ L +++ WH C++C +C L + CF+++G ++C++D++R V
Sbjct: 59 CAGCGGRILDRYYLLAVDKQWHMQCLKCCECKLRLDSELTCFAKDGSIYCKDDYYRRFSV 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ L+ D
Sbjct: 119 KRCARCHLGISASEMV--------------MRARDLVYHLSCFTCATCNKALATGDHFGM 164
Query: 120 REGKLFCRNDF 130
++ ++CR+ +
Sbjct: 165 KDAMVYCRSHY 175
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC ILD++ L +++ WH C++C +C L + CF+++G ++C++D++
Sbjct: 59 CAGCGGRILDRYYLLAVDKQWHMQCLKCCECKLRLDSELTCFAKDGSIYCKDDYY 113
>gi|312075006|ref|XP_003140224.1| hypothetical protein LOAG_04639 [Loa loa]
Length = 325
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C++ F++ RF
Sbjct: 17 CGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFYK---RFG 73
Query: 65 SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDK----CFS 119
+ C + C++ I D + E +H C +C C L
Sbjct: 74 TKCSM------------CDEGICPDMVVRRANEHVYHVSCFQCIICKRELRTGEEFYLIP 121
Query: 120 REGKLFCRNDF 130
+G+L C++D+
Sbjct: 122 TDGRLVCKSDY 132
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S + C CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C++ F+
Sbjct: 11 SGTVYLCGKCEEPIRDRFVLKVLDRSFHPQCLRCVHCEQLLSSKCYLKGGQPYCKDHFY 69
>gi|301767830|ref|XP_002919335.1| PREDICTED: LIM/homeobox protein Lhx9-like [Ailuropoda melanoleuca]
Length = 447
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 122 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 167
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 168 KDSLVYCRAHF 178
Score = 52.8 bits (125), Expect = 5e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 116
>gi|168472435|gb|ACA24001.1| LHX3 [Bos taurus]
gi|169303108|gb|ACA53151.1| LHX3 [Bos taurus]
gi|169303110|gb|ACA53152.1| LHX3 [Bos taurus]
gi|169303144|gb|ACA53169.1| LHX3 [Bos taurus]
Length = 56
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 57
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 56
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 4 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 56
>gi|158296518|ref|XP_316909.4| AGAP008532-PA [Anopheles gambiae str. PEST]
gi|157014748|gb|EAA12524.5| AGAP008532-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ L +TWH + C C+ L + F R+G +C D+ SP
Sbjct: 363 CNACDKPIVGQ-VITALGKTWHPEHFTCNHCNQELGTRNFFERDGNPYCEPDYHNLFSP- 420
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C + F R
Sbjct: 421 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHER 463
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 464 DGKPYCRNDYF 474
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C + F R+GK +CRND+F
Sbjct: 422 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYF------ 474
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 475 ---------DMFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCREPFHGGSFFDHEG 524
Query: 123 KLFCRNDF 130
+C +
Sbjct: 525 LPYCETHY 532
Score = 42.4 bits (98), Expect = 0.058, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 49/128 (38%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 481 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCREPFHGGSFFDHEGLPYCETHYHAKRGSL 539
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + ++ +H + C C L+ F +
Sbjct: 540 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQND 583
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 584 KPYCHQCF 591
>gi|449268595|gb|EMC79451.1| LIM/homeobox protein Lhx2 [Columba livia]
Length = 416
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYR---- 108
Query: 63 FPSGCGVGLSSSMLI----------SCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHH 111
G G+ LS S+L CA C I + ++ + +H +C C C+
Sbjct: 109 ---GGGMHLSPSLLAVLFYRRFSVQRCARCHLGISASEMVMRARDLVYHLNCFTCTTCNK 165
Query: 112 TLS--DKCFSREGKLFCRNDF 130
L+ D ++ ++CR F
Sbjct: 166 MLTTGDHFGMKDNLVYCRLHF 186
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|328709648|ref|XP_003244023.1| PREDICTED: paxillin-like isoform 2 [Acyrthosiphon pisum]
Length = 424
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 62/124 (50%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F REG+ +C++D+F F
Sbjct: 308 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHEREGRPYCKDDYFD---MF 363
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC +PI++ ++ + L WH+ C C DC ++ K F + EG
Sbjct: 364 APKCG------------GCTRPIMENYV-SALSTQWHSSCFVCRDCKQPVTGKSFYAIEG 410
Query: 123 KLFC 126
K C
Sbjct: 411 KPAC 414
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+K I+ + ++ L +TWH + C C L + F REG+ +C D+ SP
Sbjct: 249 CTACDKAIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFEREGRPYCEPDYHNLFSP- 306
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 307 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 349
Query: 121 EGKLFCRNDFF 131
EG+ +C++D+F
Sbjct: 350 EGRPYCKDDYF 360
>gi|148224455|ref|NP_001087527.1| LIM/homeobox protein Lhx9 [Xenopus laevis]
gi|82198794|sp|Q68EY3.1|LHX9_XENLA RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|51258697|gb|AAH80067.1| Lhx9 protein [Xenopus laevis]
Length = 331
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C TL + CF+++G ++C+ D++R V+
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYYRFSVK 132
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ C +G+S+S ++ + E +H C C C+ TLS D+ +
Sbjct: 133 RCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLSTGDQFGMK 178
Query: 121 EGKLFCRNDF 130
E ++CR F
Sbjct: 179 ENLVYCRIHF 188
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CF 118
R PS L+ CAGC I D++ L +++ WH C++C +C TL + CF
Sbjct: 60 TRMPS-----LNPEKPTLCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCF 114
Query: 119 SREGKLFCRNDFF 131
+++G ++C+ D++
Sbjct: 115 AKDGSIYCKEDYY 127
>gi|224049429|ref|XP_002193662.1| PREDICTED: PDZ and LIM domain protein 5 [Taeniopygia guttata]
Length = 580
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C+ C++ IL + ++N L++TWH C C CH+ + + F E G +C D++
Sbjct: 463 CSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYY------ 515
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
L +M C GCE PI D+F L L TWH C C C +L + FS+
Sbjct: 516 ------ALFGTM---CHGCEFPIEAGDRF-LEALGHTWHDTCFVCSVCSDSLEGQTFFSK 565
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 566 KDKPLCK 572
>gi|194759290|ref|XP_001961882.1| GF15196 [Drosophila ananassae]
gi|190615579|gb|EDV31103.1| GF15196 [Drosophila ananassae]
Length = 620
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 423 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 476
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ + ++ L WH DC C DC + K F + EG
Sbjct: 477 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 525
Query: 123 KLFC 126
K C
Sbjct: 526 KPVC 529
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 364 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 421
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 422 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 464
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 465 DGKPYCRNDYF 475
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC + K F + EGK C R P +
Sbjct: 482 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEGKPVCPQCDCRQPFQG 540
Query: 64 PS--------GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
S C + CAGC KPI + + + ++ +H + C C L+
Sbjct: 541 GSFFDHEGLPYCETHYHAKRGSLCAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNK 599
Query: 116 KCF-SREGKLFC 126
F ++ K +C
Sbjct: 600 GTFKEQKDKPYC 611
>gi|85724960|ref|NP_001033913.1| paxillin, isoform G [Drosophila melanogaster]
gi|85816101|ref|NP_724184.2| paxillin, isoform F [Drosophila melanogaster]
gi|84795316|gb|AAN11038.2| paxillin, isoform F [Drosophila melanogaster]
gi|84795317|gb|AAN11040.2| paxillin, isoform G [Drosophila melanogaster]
Length = 581
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 461 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 524
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 525 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>gi|444723186|gb|ELW63847.1| Paxillin [Tupaia chinensis]
Length = 1094
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 861 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 918
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 919 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 961
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 962 DGKAYCRKDYF 972
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 920 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 975
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 976 APKCG------------GCSRAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 1022
Query: 123 KLFC 126
+ +C
Sbjct: 1023 QPYC 1026
>gi|340711972|ref|XP_003394539.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
terrestris]
Length = 402
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+DK+++ V R +H +C+ C C L+ CF RE KL+CRND+ R
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLTHSCFIRELKLYCRNDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
+ CA C EK F+L +H +C C C L + F R+
Sbjct: 112 ---------IFGVKCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQ 162
Query: 122 GKLFCRNDF 130
G+ CR D+
Sbjct: 163 GQPICRRDY 171
>gi|82524343|ref|NP_001032320.1| LIM/homeobox protein Lhx9 isoform 2 [Danio rerio]
gi|76667071|dbj|BAE45355.1| LIM homeodomain type transcription factor Lhx9 [Danio rerio]
Length = 395
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 68/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L+ +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCAHCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRVHF 187
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L+ +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLHAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|327273063|ref|XP_003221302.1| PREDICTED: PDZ and LIM domain protein 5-like [Anolis carolinensis]
Length = 647
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 61/127 (48%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C++ IL + ++N L++TWH C C CH + + F E G +C D++
Sbjct: 530 CARCQRKILGE-VINALKQTWHVSCFVCVACHKPIRNNVFHLEDGDPYCETDYY------ 582
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
L +M C GCE PI D+F L L TWH C C C +L + FS+
Sbjct: 583 ------ALFGTM---CHGCEFPIEAGDRF-LEALGHTWHDTCFVCSVCCDSLEGQTFFSK 632
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 633 KDKPLCK 639
>gi|386769874|ref|NP_001246089.1| paxillin, isoform H [Drosophila melanogaster]
gi|284515854|gb|ADB91434.1| MIP15702p [Drosophila melanogaster]
gi|383291574|gb|AFH03763.1| paxillin, isoform H [Drosophila melanogaster]
Length = 563
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 330 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 387
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 388 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 430
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 431 DGKPYCRNDYF 441
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 389 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 442
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 443 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 491
Query: 123 KLFCRNDF 130
+C +
Sbjct: 492 LPYCETHY 499
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 448 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 506
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 507 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 550
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 551 KPYCHTCF 558
>gi|8248965|gb|AAC60669.2| lateral and intermediate mesoderm differentiation and neurogenesis
protein [Mus sp.]
Length = 407
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 33/141 (23%)
Query: 2 LISCAGCEKPIL--------DKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 53
++ CAGC++PIL D+FLLNVL+R C L++KCFSREGKL+C+
Sbjct: 1 MVHCAGCKRPILARQVRPVLDRFLLNVLDRACECKC--------NLTEKCFSREGKLYCK 52
Query: 54 NDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
NDFFR +GC G+S S L+ A + +H +C C C+ L
Sbjct: 53 NDFFRCFGTKCAGCAQGISPSDLVRRA--------------RSKVFHLNCFTCMMCNKQL 98
Query: 114 S---DKCFSREGKLFCRNDFF 131
S + E K C+ D+
Sbjct: 99 STGEELYIIDENKFVCKEDYL 119
>gi|328708276|ref|XP_001946004.2| PREDICTED: protein apterous-like [Acyrthosiphon pisum]
Length = 556
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFR-SPV 61
C GC ILD++ L +++ WHA C++C C TL+ KCF R+G ++C+ D+ R +
Sbjct: 185 CDGCGLKILDRYYLFAVDKRWHASCLQCSQCTRTLASEIKCFYRDGNIYCKADYQRLYGI 244
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R C G+S S L+ + + +H C C C L+ D+
Sbjct: 245 RRCGRCHAGISPSELV--------------MRARDTVFHVPCFSCTVCLAVLTKGDQFGM 290
Query: 120 REGKLFCRNDF 130
R+G +FC++ +
Sbjct: 291 RDGAVFCQHHY 301
>gi|224471838|sp|A0JNI8.2|LHX9_BOVIN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|110665672|gb|ABG81482.1| LIM homeobox 9 [Bos taurus]
Length = 397
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|158299663|ref|XP_319730.4| AGAP008981-PA [Anopheles gambiae str. PEST]
gi|157013625|gb|EAA14878.5| AGAP008981-PA [Anopheles gambiae str. PEST]
Length = 197
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRN 128
L S+ L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+
Sbjct: 134 LPSTGLDECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGANSCFSRDGNIYCKT 193
Query: 129 DFF 131
D++
Sbjct: 194 DYY 196
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR 58
L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+ D++R
Sbjct: 139 LDECAGCDMPIQDRFYLSAVERKWHASCLQCCICRQTLEGANSCFSRDGNIYCKTDYYR 197
>gi|24585203|ref|NP_724185.1| paxillin, isoform B [Drosophila melanogaster]
gi|22946830|gb|AAF53791.2| paxillin, isoform B [Drosophila melanogaster]
Length = 556
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 323 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 380
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 381 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 423
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 424 DGKPYCRNDYF 434
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 382 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 435
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 436 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 484
Query: 123 KLFCRNDF 130
+C +
Sbjct: 485 LPYCETHY 492
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 441 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 499
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 500 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 543
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 544 KPYCHTCF 551
>gi|390339027|ref|XP_781774.3| PREDICTED: insulin gene enhancer protein ISL-1-like
[Strongylocentrotus purpuratus]
Length = 402
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 21/131 (16%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C DC L + CF R+GK +C+ D+ R
Sbjct: 51 CVGCGGSIQDQYILRVAPDLEWHAACLKCADCCTYLDETCTCFVRDGKPYCKRDYLR--- 107
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
CA C + + F++ + +H DC RC C L D+
Sbjct: 108 ------------LFGTKCAKCSQGFTKNDFVMRARNKIYHIDCFRCVACSRQLIPGDEFA 155
Query: 119 SREGKLFCRND 129
RE LFC+ D
Sbjct: 156 LREDGLFCKAD 166
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C DC L + C F R+GK +C+ D+
Sbjct: 51 CVGCGGSIQDQYILRVAPDLEWHAACLKCADCCTYLDETCTCFVRDGKPYCKRDYL 106
>gi|440904877|gb|ELR55334.1| LIM/homeobox protein Lhx9 [Bos grunniens mutus]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|348504222|ref|XP_003439661.1| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Oreochromis niloticus]
Length = 456
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I D+FL+ V +WH C++C C L+D C+ R+ K +C++D+
Sbjct: 32 CEGCAQIISDRFLMRVNGASWHQKCLQCAACQQPLTDTCYFRDTKPYCKSDY-------- 83
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
+ C+ C I +F++ L+ +H C C C H L D+ +E
Sbjct: 84 -------QQLFAVECSNCLGKIAPTEFVMRALDSVYHLSCFCCCVCQHQLCKGDEFVLKE 136
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 137 GQLLCKTDY 145
>gi|21483570|gb|AAM52760.1| SD04793p [Drosophila melanogaster]
Length = 557
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 324 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 382 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 424
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 425 DGKPYCRNDYF 435
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 383 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 436
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 437 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 485
Query: 123 KLFCRNDF 130
+C +
Sbjct: 486 LPYCETHY 493
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 442 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 500
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 501 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 544
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 545 KPYCHTCF 552
>gi|24585199|ref|NP_724183.1| paxillin, isoform C [Drosophila melanogaster]
gi|22946828|gb|AAN11037.1| paxillin, isoform C [Drosophila melanogaster]
gi|239735615|gb|ACS12717.1| FI11475p [Drosophila melanogaster]
gi|267844928|gb|ACY79578.1| FI13101p [Drosophila melanogaster]
Length = 557
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 324 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 382 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 424
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 425 DGKPYCRNDYF 435
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 383 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 436
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 437 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 485
Query: 123 KLFCRNDF 130
+C +
Sbjct: 486 LPYCETHY 493
Score = 45.1 bits (105), Expect = 0.010, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 442 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 500
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 501 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 544
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 545 KPYCHTCF 552
>gi|198471372|ref|XP_002133725.1| GA23049 [Drosophila pseudoobscura pseudoobscura]
gi|198145889|gb|EDY72352.1| GA23049 [Drosophila pseudoobscura pseudoobscura]
Length = 179
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 59/121 (48%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCY-DCHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+C GC++PIL++ +N +E++WH +C +C C L F REG +CR DF
Sbjct: 66 TCFGCKQPILER-TINAMEKSWHEECFQCNGPCKKPLVGTSFYEREGHPYCRADF----- 119
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CAGCE+PI D ++ L WH C +C +C ++ F+ E
Sbjct: 120 ----------EQLFAARCAGCEQPITDNAIV-ALSAKWHRSCFKCKNCSAPITASSFAVE 168
Query: 122 G 122
G
Sbjct: 169 G 169
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 63/122 (51%), Gaps = 19/122 (15%)
Query: 12 ILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCGVG 70
++ + ++ L ++WH D C DC +++ F+ + G+ C + F V+ SG
Sbjct: 14 VIAERIITALGKSWHPDHFACKDCQRPITEATFNIQSGEPVCSDCF----VKNYSG---- 65
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCY-DCHHTLSDKCF-SREGKLFCRN 128
+C GC++PIL++ +N +E++WH +C +C C L F REG +CR
Sbjct: 66 -------TCFGCKQPILER-TINAMEKSWHEECFQCNGPCKKPLVGTSFYEREGHPYCRA 117
Query: 129 DF 130
DF
Sbjct: 118 DF 119
>gi|260794981|ref|XP_002592485.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
gi|229277705|gb|EEN48496.1| LIM class homeodomain transcription factor, apterous subclass
[Branchiostoma floridae]
Length = 452
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 69/131 (52%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I+D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 60 CAGCGGRIVDRYYLLAVDKQWHLHCLKCCECKLRLESELTCFAKDGSIYCKQDYYRRFSV 119
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D+
Sbjct: 120 KRCARCHLGISASEMV--------------MRARDLVFHLNCFMCETCNRPLTTGDQYGM 165
Query: 120 REGKLFCRNDF 130
R ++CR D+
Sbjct: 166 RGDTVYCRYDY 176
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 46/83 (55%), Gaps = 14/83 (16%)
Query: 63 FPSGCGVGLSS----SMLIS--------CAGCEKPILDKFLLNVLERTWHADCVRCYDCH 110
P+GC G S+ +M + CAGC I+D++ L +++ WH C++C +C
Sbjct: 32 LPTGCSSGPSAEHGRAMPVVHPEEKPGVCAGCGGRIVDRYYLLAVDKQWHLHCLKCCECK 91
Query: 111 HTLSDK--CFSREGKLFCRNDFF 131
L + CF+++G ++C+ D++
Sbjct: 92 LRLESELTCFAKDGSIYCKQDYY 114
>gi|194879607|ref|XP_001974264.1| GG21635 [Drosophila erecta]
gi|190657451|gb|EDV54664.1| GG21635 [Drosophila erecta]
Length = 584
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 351 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 408
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 409 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 451
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 452 DGKPYCRNDYF 462
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 410 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 463
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 464 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 512
Query: 123 KLFCRNDF 130
+C +
Sbjct: 513 LPYCETHY 520
Score = 44.7 bits (104), Expect = 0.011, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 469 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 527
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 528 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 571
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 572 KPYCHTCF 579
>gi|403307412|ref|XP_003944189.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 399
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|390345093|ref|XP_787486.3| PREDICTED: LIM domain transcription factor LMO4-B-like
[Strongylocentrotus purpuratus]
Length = 208
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I+D+FLL+ ++R WH C++C C+ L D CFS+ G + C+ D+ R +
Sbjct: 59 CAGCGGKIIDRFLLHAVDRFWHTGCLKCSCCNVQLGDIGHSCFSKGGMILCKKDYLR--I 116
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C C + I ++ ++ R +H C C CH L D+
Sbjct: 117 FGTSG-----------ACTACGQQIPANELVMRTQNRVYHLKCFACSSCHIQLVPGDRYT 165
Query: 119 SREGKLFCRND 129
G + C ND
Sbjct: 166 VVNGSIVCEND 176
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I+D+FLL+ ++R WH C++C C+ L D CFS+ G + C+ D+
Sbjct: 59 CAGCGGKIIDRFLLHAVDRFWHTGCLKCSCCNVQLGDIGHSCFSKGGMILCKKDYL 114
>gi|449688033|ref|XP_002168161.2| PREDICTED: paxillin-like, partial [Hydra magnipapillata]
Length = 349
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C C+KPI+ + + L +TWH + CY C L + F R+GK FC D+
Sbjct: 204 CGACDKPIIGQ-VCTALGKTWHPEHFTCYVCDTPLGTQTFFERDGKPFCEEDYHE----- 257
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C C+ PILD + + ++ TWH + C++C+ D F ++G
Sbjct: 258 ----------QFAPKCFACQGPILDSCVTS-MDHTWHPEHFVCFECNLPFGDSGFHEKDG 306
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 307 KAYCREDYF 315
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 18/103 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+ PILD + + ++ TWH + C++C+ D F ++GK +CR D+F+
Sbjct: 263 CFACQGPILDSCVTS-MDHTWHPEHFVCFECNLPFGDSGFHEKDGKAYCREDYFK----- 316
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRC 106
C+GC K I+D + ++ L WH C C
Sbjct: 317 ----------MFAPKCSGCNKAIIDNY-ISALNGHWHPHCFVC 348
>gi|397505116|ref|XP_003823119.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Pan paniscus]
gi|441624364|ref|XP_004088986.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Nomascus
leucogenys]
Length = 399
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|351708127|gb|EHB11046.1| LIM/homeobox protein Lhx9 [Heterocephalus glaber]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|332023566|gb|EGI63802.1| Paxillin [Acromyrmex echinatior]
Length = 607
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 24/131 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C D+ SP
Sbjct: 340 CSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCETDYHNLFSP- 397
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PI + + LE+TWH + C C ++ F R
Sbjct: 398 ----------------RCAYCNGPI--RKCVTALEKTWHTEHFFCAQCGKQFGEEGFHER 439
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 440 DGKPYCREDYF 450
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 20/124 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI + + LE+TWH + C C ++ F R+GK +CR D+F F
Sbjct: 399 CAYCNGPI--RKCVTALEKTWHTEHFFCAQCGKQFGEEGFHERDGKPYCREDYFD---MF 453
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC + I++ ++ + L WH DC C DC +S K F + EG
Sbjct: 454 APKCG------------GCNRAIMENYI-SALNSQWHPDCFVCRDCKKPVSGKSFYAMEG 500
Query: 123 KLFC 126
+ C
Sbjct: 501 QPVC 504
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRN 128
G++++ C+ CEKPI+ + ++ L +TWH + C C+ L + F REG +C
Sbjct: 331 GVNTTQKGCCSACEKPIVGQ-VITALGKTWHPEHFTCTHCNQELGTRNFFEREGHPYCET 389
Query: 129 DF 130
D+
Sbjct: 390 DY 391
>gi|291402694|ref|XP_002717723.1| PREDICTED: LIM homeobox protein 9-like isoform 1 [Oryctolagus
cuniculus]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|395838925|ref|XP_003792355.1| PREDICTED: LIM/homeobox protein Lhx9 [Otolemur garnettii]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|33569216|ref|NP_064589.2| LIM/homeobox protein Lhx9 isoform 1 [Homo sapiens]
gi|73960328|ref|XP_848787.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Canis lupus
familiaris]
gi|332230752|ref|XP_003264559.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Nomascus
leucogenys]
gi|224471883|sp|Q9NQ69.3|LHX9_HUMAN RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|33416232|gb|AAP32471.2| LIM-homeobox 9 protein [Homo sapiens]
gi|119611696|gb|EAW91290.1| LIM homeobox 9, isoform CRA_d [Homo sapiens]
gi|124297089|gb|AAI31623.1| LIM homeobox 9 [Homo sapiens]
gi|355558916|gb|EHH15696.1| hypothetical protein EGK_01820 [Macaca mulatta]
gi|355746065|gb|EHH50690.1| hypothetical protein EGM_01558 [Macaca fascicularis]
Length = 397
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|432922687|ref|XP_004080344.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like isoform 4 [Oryzias latipes]
Length = 479
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +D+F
Sbjct: 245 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCESDYF----- 298
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C T D+ F RE
Sbjct: 299 ----------TLFSPHCAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDRE 347
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 348 GQQYCQQCFL 357
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C T D+ F REG+ +C+
Sbjct: 305 CAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDREGQQYCQQ--------- 354
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F +G
Sbjct: 355 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHDG 407
Query: 123 KLFCRNDF 130
K C +
Sbjct: 408 KPLCEAHY 415
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F +GK C + +S
Sbjct: 364 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHDGKPLCEAHYHQS---- 418
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 419 --------RGSM---CHACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 466
Query: 123 KLFC 126
K +C
Sbjct: 467 KPYC 470
Score = 41.6 bits (96), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +
Sbjct: 237 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCES 295
Query: 129 DFF 131
D+F
Sbjct: 296 DYF 298
>gi|350402518|ref|XP_003486514.1| PREDICTED: LIM homeobox transcription factor 1-beta-like [Bombus
impatiens]
Length = 402
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+DK+++ V R +H +C+ C C L+ CF RE KL+CRND+ R
Sbjct: 58 CAGCGRTIVDKYVMQVSGRNYHEECLSCAACATPLTHSCFIRELKLYCRNDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
+ CA C EK F+L +H +C C C L + F R+
Sbjct: 112 ---------IFGVKCARCMEKISCSDFVLRAPGLVFHVECFACCMCGQPLLPGTQYFLRQ 162
Query: 122 GKLFCRNDF 130
G+ CR D+
Sbjct: 163 GQPICRRDY 171
>gi|195345079|ref|XP_002039103.1| GM17013 [Drosophila sechellia]
gi|194134233|gb|EDW55749.1| GM17013 [Drosophila sechellia]
Length = 581
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 461 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 524
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 525 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>gi|195484437|ref|XP_002090694.1| GE12653 [Drosophila yakuba]
gi|194176795|gb|EDW90406.1| GE12653 [Drosophila yakuba]
Length = 581
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 461 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 524
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 525 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>gi|157119552|ref|XP_001659420.1| hypothetical protein AaeL_AAEL008690 [Aedes aegypti]
gi|108875288|gb|EAT39513.1| AAEL008690-PA, partial [Aedes aegypti]
Length = 176
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRN 128
L S L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+
Sbjct: 113 LPPSGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKT 172
Query: 129 DFF 131
D++
Sbjct: 173 DYY 175
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR 58
L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+ D++R
Sbjct: 118 LDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDYYR 176
>gi|351702111|gb|EHB05030.1| LIM/homeobox protein Lhx2 [Heterocephalus glaber]
Length = 502
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 165 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 224
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 225 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 270
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 271 KDSLVYCRLHF 281
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSRE 121
P+G +SS CAGC I D++ L +++ WH C++C +C L + CFS++
Sbjct: 150 PAGTMPSISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKD 209
Query: 122 GKLFCRNDFF 131
G ++C+ D++
Sbjct: 210 GSIYCKEDYY 219
>gi|24585205|ref|NP_523601.2| paxillin, isoform A [Drosophila melanogaster]
gi|386769876|ref|NP_001246090.1| paxillin, isoform K [Drosophila melanogaster]
gi|442628372|ref|NP_001260573.1| paxillin, isoform J [Drosophila melanogaster]
gi|22946831|gb|AAF53792.3| paxillin, isoform A [Drosophila melanogaster]
gi|262359996|gb|ACY56903.1| LD06038p [Drosophila melanogaster]
gi|383291575|gb|AFH03764.1| paxillin, isoform K [Drosophila melanogaster]
gi|440213931|gb|AGB93108.1| paxillin, isoform J [Drosophila melanogaster]
Length = 581
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 461 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 524
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 525 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>gi|14669808|dbj|BAB33159.2| paxillin [Drosophila melanogaster]
Length = 581
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 405
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 406 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 448
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 449 DGKPYCRNDYF 459
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 461 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 524
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 525 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>gi|348578260|ref|XP_003474901.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Cavia
porcellus]
Length = 397
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|170048230|ref|XP_001870664.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870358|gb|EDS33741.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 209
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 42/59 (71%), Gaps = 2/59 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR 58
L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+ D++R
Sbjct: 151 LDECAGCDMPIQDRFYLSAVERKWHATCLQCCVCRQTLEGANSCFSRDGNIYCKTDYYR 209
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 2/58 (3%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 131
L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+ D++
Sbjct: 151 LDECAGCDMPIQDRFYLSAVERKWHATCLQCCVCRQTLEGANSCFSRDGNIYCKTDYY 208
>gi|241688853|ref|XP_002411721.1| LIM domain containing protein [Ixodes scapularis]
gi|215504541|gb|EEC14035.1| LIM domain containing protein [Ixodes scapularis]
Length = 173
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC PI D+++L V + WHA C++C DC L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGAPIRDQYILRVAPDLEWHAACLKCADCQQFLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
S C G S + F++ + +H DC RC C L D+
Sbjct: 87 AKCSKCQQGFSRT--------------DFVMRARQHIYHLDCFRCQACARQLIPGDEFAL 132
Query: 120 REGKLFCRND 129
R+ LFCR D
Sbjct: 133 RDDGLFCRAD 142
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC PI D+++L V + WHA C++C DC L + C F R+GK +C+ D+
Sbjct: 27 CVGCGAPIRDQYILRVAPDLEWHAACLKCADCQQFLDETCTCFVRDGKTYCKRDY 81
>gi|432922681|ref|XP_004080341.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like isoform 1 [Oryzias latipes]
Length = 462
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +D+F
Sbjct: 228 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCESDYF----- 281
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C T D+ F RE
Sbjct: 282 ----------TLFSPHCAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDRE 330
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 331 GQQYCQQCFL 340
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C T D+ F REG+ +C+
Sbjct: 288 CAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDREGQQYCQQ--------- 337
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F +G
Sbjct: 338 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHDG 390
Query: 123 KLFCRNDF 130
K C +
Sbjct: 391 KPLCEAHY 398
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F +GK C + +S
Sbjct: 347 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHDGKPLCEAHYHQS---- 401
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 402 --------RGSM---CHACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 449
Query: 123 KLFC 126
K +C
Sbjct: 450 KPYC 453
Score = 41.6 bits (96), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +
Sbjct: 220 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCES 278
Query: 129 DFF 131
D+F
Sbjct: 279 DYF 281
>gi|157106396|ref|XP_001649304.1| hypothetical protein AaeL_AAEL014669 [Aedes aegypti]
gi|108868848|gb|EAT33073.1| AAEL014669-PA [Aedes aegypti]
Length = 233
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 43/63 (68%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRN 128
L S L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+
Sbjct: 131 LPPSGLDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKT 190
Query: 129 DFF 131
D++
Sbjct: 191 DYY 193
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 42/61 (68%), Gaps = 2/61 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFRS 59
L CAGC+ PI D+F L+ +ER WHA C++C C TL ++ CFSR+G ++C+ D++
Sbjct: 136 LDECAGCDMPIQDRFYLSAVERKWHATCLQCCICRQTLEGANSCFSRDGNIYCKTDYYSK 195
Query: 60 P 60
P
Sbjct: 196 P 196
>gi|281494552|gb|ADA72028.1| Isl1/2A [Lethenteron camtschaticum]
Length = 138
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 5 CVGCGAQIRDPFILRVSPDLEWHASCLKCAECAQYLDETCTCFVRDGKTYCKRDYVRLFG 64
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ CGVG S + F++ V + +H +C RC C L D+
Sbjct: 65 IKCAKCGVGFSKT--------------DFVMRVRTQVFHLECFRCVACSRQLIPGDEFAL 110
Query: 120 REGKLFCRND 129
RE LFCR D
Sbjct: 111 REDGLFCRAD 120
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 5 CVGCGAQIRDPFILRVSPDLEWHASCLKCAECAQYLDETCTCFVRDGKTYCKRDY 59
>gi|110611159|ref|NP_001036042.1| LIM/homeobox protein Lhx9 isoform c [Mus musculus]
gi|224471884|sp|Q9WUH2.3|LHX9_MOUSE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
Length = 397
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|432922683|ref|XP_004080342.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like isoform 2 [Oryzias latipes]
Length = 465
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +D+F
Sbjct: 231 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCESDYF----- 284
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C T D+ F RE
Sbjct: 285 ----------TLFSPHCAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDRE 333
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 334 GQQYCQQCFL 343
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C T D+ F REG+ +C+
Sbjct: 291 CAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDREGQQYCQQ--------- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F +G
Sbjct: 341 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHDG 393
Query: 123 KLFCRNDF 130
K C +
Sbjct: 394 KPLCEAHY 401
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F +GK C + +S
Sbjct: 350 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHDGKPLCEAHYHQS---- 404
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 405 --------RGSM---CHACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 452
Query: 123 KLFC 126
K +C
Sbjct: 453 KPYC 456
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +
Sbjct: 223 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCES 281
Query: 129 DFF 131
D+F
Sbjct: 282 DYF 284
>gi|156398319|ref|XP_001638136.1| predicted protein [Nematostella vectensis]
gi|156225254|gb|EDO46073.1| predicted protein [Nematostella vectensis]
Length = 329
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C DCH L +K CF REGK +C+ D+ R
Sbjct: 17 CVGCGSQIHDQYILRVAPDLEWHASCLKCADCHMYLDEKCTCFVREGKTYCKRDYVRLFG 76
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C + S + F++ + +H DC RC C L D+
Sbjct: 77 TKCAKCSLNFSK--------------NDFVMRARNKIYHIDCFRCVACSRQLVPGDEFAL 122
Query: 120 REGKLFCRND 129
RE LFC+ D
Sbjct: 123 REDGLFCKAD 132
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C DCH L +KC F REGK +C+ D+
Sbjct: 17 CVGCGSQIHDQYILRVAPDLEWHASCLKCADCHMYLDEKCTCFVREGKTYCKRDYV 72
>gi|432922685|ref|XP_004080343.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like isoform 3 [Oryzias latipes]
Length = 450
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +D+F
Sbjct: 216 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCESDYF----- 269
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C T D+ F RE
Sbjct: 270 ----------TLFSPHCAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDRE 318
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 319 GQQYCQQCFL 328
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C T D+ F REG+ +C+
Sbjct: 276 CAHCSKPILNK-MVTALDKNWHPECFCCVKCSRTFGDEGFHDREGQQYCQQ--------- 325
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F +G
Sbjct: 326 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHDG 378
Query: 123 KLFCRNDF 130
K C +
Sbjct: 379 KPLCEAHY 386
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F +GK C + +S
Sbjct: 335 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHDGKPLCEAHYHQS---- 389
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 390 --------RGSM---CHACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 437
Query: 123 KLFC 126
K +C
Sbjct: 438 KPYC 441
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +
Sbjct: 208 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCES 266
Query: 129 DFF 131
D+F
Sbjct: 267 DYF 269
>gi|241811701|ref|XP_002416451.1| lim homeobox protein, putative [Ixodes scapularis]
gi|215510915|gb|EEC20368.1| lim homeobox protein, putative [Ixodes scapularis]
Length = 100
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL 124
S G +S+ L CAGC PI+D+++L V+E +WH C++C CH L C+SR+ KL
Sbjct: 35 SAAEAGATSASL--CAGCGLPIVDRYILRVMEHSWHESCLQCSVCHAPLEQSCYSRDKKL 92
Query: 125 FCRNDF 130
FC+ D+
Sbjct: 93 FCKADY 98
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 37/52 (71%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 56
CAGC PI+D+++L V+E +WH C++C CH L C+SR+ KLFC+ D+
Sbjct: 47 CAGCGLPIVDRYILRVMEHSWHESCLQCSVCHAPLEQSCYSRDKKLFCKADY 98
>gi|256073008|ref|XP_002572825.1| arrowhead [Schistosoma mansoni]
gi|360042902|emb|CCD78312.1| putative lim homeobox protein [Schistosoma mansoni]
Length = 418
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 35/135 (25%), Positives = 66/135 (48%), Gaps = 20/135 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L+ C C+ I D++ ++ + TWH +C+RC+DC L+++C++++G L+CR DF +
Sbjct: 126 LLRCNECQSIIFDQYYHSIDDLTWHQNCLRCFDCGFVLTERCYTKDGHLYCREDFIK--- 182
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLER-TWHADCVRCYDC--HHTLSDKCF 118
+ C+ C K I + L+ +H +C +C C T D+ +
Sbjct: 183 ------------NFGPKCSACHKLIRNGELVRFARHYVYHINCFQCTICKKQFTTGDQYY 230
Query: 119 --SREGKLFCRNDFF 131
+ L CR ++
Sbjct: 231 LLYSDKFLICREHYY 245
>gi|11321422|gb|AAG34161.1|AF312926_1 focal contact protein paxillin [Drosophila melanogaster]
Length = 556
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 323 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 380
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 381 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 423
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 424 DGKPYCRNDYF 434
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 382 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFE----- 435
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 436 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 484
Query: 123 KLFCRNDF 130
+C +
Sbjct: 485 LPYCETHY 492
Score = 44.3 bits (103), Expect = 0.015, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 441 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 499
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 500 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 543
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 544 KPYCHTCF 551
>gi|354485102|ref|XP_003504723.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 2 [Cricetulus
griseus]
Length = 397
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|114571656|ref|XP_001139158.1| PREDICTED: LIM/homeobox protein Lhx9 isoform 2 [Pan troglodytes]
Length = 399
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|431916082|gb|ELK16336.1| LIM homeobox transcription factor 1-alpha [Pteropus alecto]
Length = 374
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 65/132 (49%), Gaps = 18/132 (13%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L+ C GC++ I D+FLL + + WH +CV+C C L CF R+ KL+C+ D+ +
Sbjct: 24 LLVCEGCQRVISDRFLLRLNDSFWHEECVQCASCKEPLETTCFYRDKKLYCKCDYEK--- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
+ C GC + I ++F++ + +H C C C L D+
Sbjct: 81 ------------LFAVKCGGCFEAIAPNEFVMRAQKTVYHLGCFCCCVCERQLQKGDEFV 128
Query: 119 SREGKLFCRNDF 130
++G+L CR D+
Sbjct: 129 LKDGQLLCRGDY 140
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 42/76 (55%)
Query: 55 DFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS 114
D + FPS S S L+ C GC++ I D+FLL + + WH +CV+C C L
Sbjct: 3 DGLKMEENFPSAIETSASFSSLLVCEGCQRVISDRFLLRLNDSFWHEECVQCASCKEPLE 62
Query: 115 DKCFSREGKLFCRNDF 130
CF R+ KL+C+ D+
Sbjct: 63 TTCFYRDKKLYCKCDY 78
>gi|77455002|gb|ABA86310.1| CG31624 [Drosophila melanogaster]
Length = 173
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + ER WH DC C C L+++ F R+GK +C+ D+
Sbjct: 58 TCAGCKKPILEKTICAMGER-WHEDCFCCGGACKKPLANQTFYERDGKPYCKQDY----- 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH +C RC C + ++ + F+ +
Sbjct: 112 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRNCFRCNKCENPITSQTFTID 160
Query: 122 G 122
G
Sbjct: 161 G 161
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 13 LDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCGVGL 71
+ K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 7 ITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER------------ 54
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRND 129
+CAGC+KPIL+K + + ER WH DC C C L+++ F R+GK +C+ D
Sbjct: 55 ---YTYTCAGCKKPILEKTICAMGER-WHEDCFCCGGACKKPLANQTFYERDGKPYCKQD 110
Query: 130 F 130
+
Sbjct: 111 Y 111
>gi|444730606|gb|ELW70984.1| LIM homeobox transcription factor 1-alpha [Tupaia chinensis]
Length = 265
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKFDY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|410921836|ref|XP_003974389.1| PREDICTED: LIM/homeobox protein Lhx9-like [Takifugu rubripes]
Length = 506
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 180 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 239
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 240 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGM 285
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 286 KDSLVYCRLHF 296
Score = 52.0 bits (123), Expect = 8e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 180 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 234
>gi|355567447|gb|EHH23788.1| LIM/homeobox protein Lhx2 [Macaca mulatta]
Length = 406
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|335296199|ref|XP_003130643.2| PREDICTED: LIM/homeobox protein Lhx9 isoform 1 [Sus scrofa]
Length = 399
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|45382441|ref|NP_990220.1| LIM/homeobox protein Lhx2 [Gallus gallus]
gi|2340819|dbj|BAA21846.1| LIM homeodomain [Gallus gallus]
Length = 400
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 54 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 113
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 114 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 159
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 160 KDNLVYCRLHF 170
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 46 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 105
Query: 129 DFF 131
D++
Sbjct: 106 DYY 108
>gi|449478340|ref|XP_004175607.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Taeniopygia
guttata]
Length = 399
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDNLVYCRLHF 169
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|47214002|emb|CAG01877.1| unnamed protein product [Tetraodon nigroviridis]
Length = 587
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ + RTWH + C C + K F R+G+ +C D+ SP
Sbjct: 355 CGACKKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSKNFFERDGQPYCEKDYHNLFSP- 412
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L++TWH + C C + F +
Sbjct: 413 ----------------RCQYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGAEGFHEK 455
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 456 DGKAYCRKDYF 466
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F ++GK +CR D+F F
Sbjct: 414 CQYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGAEGFHEKDGKAYCRKDYFD---MF 469
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 470 APKCG------------GCARAILENY-ISALNSLWHPECFVCRECFTPFVNGSFFDHDG 516
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 517 QPYCEAHY 524
Score = 41.6 bits (96), Expect = 0.092, Method: Composition-based stats.
Identities = 27/125 (21%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 473 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFDHDGQPYCEAHYHERRGSL 531
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 532 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQNE 575
Query: 123 KLFCR 127
K +C+
Sbjct: 576 KPYCQ 580
>gi|224073927|ref|XP_002191376.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Taeniopygia
guttata]
Length = 436
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 90 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 149
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 150 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 195
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 196 KDNLVYCRLHF 206
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 82 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 141
Query: 129 DFF 131
D++
Sbjct: 142 DYY 144
>gi|126306172|ref|XP_001363612.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Monodelphis
domestica]
Length = 382
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|66804247|gb|AAY56682.1| unknown [Drosophila simulans]
Length = 154
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 48 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKQDY----- 101
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 102 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 150
Query: 122 G 122
G
Sbjct: 151 G 151
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 19/117 (16%)
Query: 17 LLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCGVGLSSSM 75
++ L +TWH + C C + D F+ + G+ C F
Sbjct: 1 MITALGKTWHPEHFLCRHCDEQILDATFNVQSGEPVCNKCFVER---------------Y 45
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDF 130
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 46 TYTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKQDY 101
>gi|123907024|sp|Q1LWV4.1|LHX9_DANRE RecName: Full=LIM/homeobox protein Lhx9; Short=LIM homeobox protein
9
gi|94732381|emb|CAK04966.1| novel protein similar to vertebrate LIM homeobox 9 (LHX9) [Danio
rerio]
gi|190339118|gb|AAI63023.1| Lhx9 protein [Danio rerio]
gi|190339147|gb|AAI63060.1| Lhx9 protein [Danio rerio]
gi|190339149|gb|AAI63073.1| Lhx9 protein [Danio rerio]
Length = 396
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRVHF 187
Score = 52.0 bits (123), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|358333778|dbj|GAA52242.1| LIM homeobox protein 3/4, partial [Clonorchis sinensis]
Length = 405
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 64/117 (54%), Gaps = 19/117 (16%)
Query: 18 LNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCGVGLSSSMLI 77
+ VL + WH++C++C DC +LSDKCF R +++C+NDFFR RF +
Sbjct: 1 MRVLNQHWHSNCLKCMDCGASLSDKCFMRMDEVYCKNDFFR---RFGT------------ 45
Query: 78 SCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF-SREGKLFCRNDF 130
CAGCE+ I + + + +H DC C C L+ D+ + R+ KL C+ DF
Sbjct: 46 KCAGCERGIPPTEVVRTAQDNVYHMDCFACVICDRLLNTGDEFYLLRDRKLMCKYDF 102
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 31/40 (77%)
Query: 92 LNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ VL + WH++C++C DC +LSDKCF R +++C+NDFF
Sbjct: 1 MRVLNQHWHSNCLKCMDCGASLSDKCFMRMDEVYCKNDFF 40
>gi|307196006|gb|EFN77731.1| LIM/homeobox protein Lhx9 [Harpegnathos saltator]
Length = 433
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR-S 59
+ C GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D+ R
Sbjct: 56 LGCGGCGREIAERWYLKAADRVWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYCRLF 115
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
V S C G+S+S L+ + E +H C C C L+ D
Sbjct: 116 AVSRCSRCRAGISASELV--------------MRARELVYHVACFTCASCGTPLNKGDHF 161
Query: 118 FSREGKLFCR 127
R+G ++CR
Sbjct: 162 GQRDGLVYCR 171
Score = 52.4 bits (124), Expect = 6e-05, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDF 130
+ C GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D+
Sbjct: 56 LGCGGCGREIAERWYLKAADRVWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDY 111
>gi|195352060|ref|XP_002042533.1| GM23266 [Drosophila sechellia]
gi|195368682|ref|XP_002045804.1| GM22049 [Drosophila sechellia]
gi|195552376|ref|XP_002076450.1| GD17716 [Drosophila simulans]
gi|195580626|ref|XP_002080136.1| GD21644 [Drosophila simulans]
gi|194124402|gb|EDW46445.1| GM23266 [Drosophila sechellia]
gi|194134958|gb|EDW56474.1| GM22049 [Drosophila sechellia]
gi|194192145|gb|EDX05721.1| GD21644 [Drosophila simulans]
gi|194201703|gb|EDX15279.1| GD17716 [Drosophila simulans]
Length = 178
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCRHCDEQILDATFNVQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL+K + + E +WH DC C C L+++ F
Sbjct: 62 -------------YTYTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKQDY 118
>gi|156384250|ref|XP_001633244.1| predicted protein [Nematostella vectensis]
gi|156220311|gb|EDO41181.1| predicted protein [Nematostella vectensis]
Length = 259
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C KPI+ + + L +TWH + C C L + F R+GK +C D+
Sbjct: 26 CAACNKPIIGQ-VCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCERDY------- 77
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ CA C PILD + L++TWH + C +C + D F R+G
Sbjct: 78 --------HDTFAPRCAYCNGPILDS-CVTALDQTWHPEHFVCAECGNPFGDTGFHERDG 128
Query: 123 KLFCRNDFF 131
K FCR D++
Sbjct: 129 KPFCREDYY 137
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILD + L++TWH + C +C + D F R+GK FCR D++
Sbjct: 85 CAYCNGPILDS-CVTALDQTWHPEHFVCAECGNPFGDTGFHERDGKPFCREDYY------ 137
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
+ C GC +PI+D + ++ L WHA+C C +C F +G
Sbjct: 138 ---------AMFAPRCGGCGQPIMDNY-ISALSAHWHAECFICTECRQPFPGGSFFDHDG 187
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 188 RPYCEMHY 195
Score = 41.2 bits (95), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRN 128
G+S++ CA C KPI+ + + L +TWH + C C L + F R+GK +C
Sbjct: 17 GVSTTKKGMCAACNKPIIGQ-VCTALGKTWHPEHFACVACEAPLGTQNFFERDGKPYCER 75
Query: 129 DF 130
D+
Sbjct: 76 DY 77
>gi|77455004|gb|ABA86311.1| CG31624 [Drosophila simulans]
gi|77455006|gb|ABA86312.1| CG31624 [Drosophila simulans]
Length = 166
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 58 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKQDY----- 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 112 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 160
Query: 122 G 122
G
Sbjct: 161 G 161
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 19/121 (15%)
Query: 13 LDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCGVGL 71
+ K ++ L +TWH + C C + D F+ + G+ C F
Sbjct: 7 ITKRMITALGKTWHPEHFLCRHCDEQILDATFNVQSGEPVCNKCFVER------------ 54
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRND 129
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D
Sbjct: 55 ---YTYTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKQD 110
Query: 130 F 130
+
Sbjct: 111 Y 111
>gi|426217051|ref|XP_004002767.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Ovis aries]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|410986575|ref|XP_003999585.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Felis catus]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|321469905|gb|EFX80883.1| hypothetical protein DAPPUDRAFT_50562 [Daphnia pulex]
Length = 315
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 62/131 (47%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC PI D+++L V + WHA C++C +C L + C F R+GK FCR D+ R
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDYVRLFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL---SDKCF 118
CG+G S S F++ + +H +C RC C L +
Sbjct: 61 AKCDKCGLGFSRS--------------DFVMRAKSKIYHIECFRCALCQRQLVPGDEFAL 106
Query: 119 SREGKLFCRND 129
+G LFC++D
Sbjct: 107 RDDGNLFCKDD 117
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC PI D+++L V + WHA C++C +C L + C F R+GK FCR D+
Sbjct: 1 CVGCGSPIQDQYILRVAPDLEWHASCLKCVECGIFLDENCTCFVRDGKTFCRRDY 55
>gi|300797454|ref|NP_001178254.1| LIM homeobox transcription factor 1-alpha [Bos taurus]
gi|296489924|tpg|DAA32037.1| TPA: LIM homeobox transcription factor 1 alpha-like [Bos taurus]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|444725759|gb|ELW66313.1| Armadillo repeat-containing protein 5 [Tupaia chinensis]
Length = 1253
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 41/130 (31%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C +PI K ++ L WH + C C D+ F REG+ +CR DF + +P
Sbjct: 1079 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQLFAP- 1136
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
C GC+ PILD + ++ L WH DC C +C S F
Sbjct: 1137 ----------------RCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEH 1179
Query: 121 EGKLFCRNDF 130
EG+ C N F
Sbjct: 1180 EGRPLCENHF 1189
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 1138 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAQRGSL 1196
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 1197 ---------------CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 1240
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 1241 KPYCQPCFL 1249
>gi|291397514|ref|XP_002715925.1| PREDICTED: LIM homeobox transcription factor 1 alpha-like
[Oryctolagus cuniculus]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|351696220|gb|EHA99138.1| LIM homeobox transcription factor 1-alpha [Heterocephalus glaber]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|348536381|ref|XP_003455675.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Oreochromis
niloticus]
Length = 399
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 132
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 133 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGM 178
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 179 KDSLVYCRLHF 189
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 127
>gi|348565813|ref|XP_003468697.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Cavia
porcellus]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|345797790|ref|XP_851352.2| PREDICTED: LIM homeobox transcription factor 1-alpha [Canis lupus
familiaris]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|213512238|ref|NP_001133443.1| Transforming growth factor beta-1-induced transcript 1 protein
[Salmo salar]
gi|209154026|gb|ACI33245.1| Transforming growth factor beta-1-induced transcript 1 protein
[Salmo salar]
Length = 502
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 23/132 (17%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFR--SP 60
SC+ C+KP++ + ++ L R WH + C +C L + F ++G+ +C +D+F SP
Sbjct: 268 SCSACQKPVVGQ-VVTALGRVWHPEHFVCSECETELGSRNFFEKDGQPYCESDYFTLYSP 326
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
CA C KPIL+K ++ L++ WH +C C C ++ F
Sbjct: 327 -----------------HCAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHD 368
Query: 120 REGKLFCRNDFF 131
REG+ +C+ F
Sbjct: 369 REGQQYCQQCFL 380
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 21/129 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C ++ F REG+ +C+ F
Sbjct: 328 CAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHDREGQQYCQQCFL------ 380
Query: 64 PSGCGVGLSSSMLIS-CAGCEKPILDKFLLNVLERTWHADCVRCYDCH-HTLSDKCFSRE 121
S+ S C GC +PIL+ + ++ L WH C C +C+ ++ F E
Sbjct: 381 ----------SLFASRCQGCTQPILENY-ISALNSLWHPQCFVCRECYCPFVNGSFFEHE 429
Query: 122 GKLFCRNDF 130
G+ C +
Sbjct: 430 GQPLCEAHY 438
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCH-HTLSDKCFSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ ++ F EG+ C + +S
Sbjct: 387 CQGCTQPILENYI-SALNSLWHPQCFVCRECYCPFVNGSFFEHEGQPLCEAHYHQS---- 441
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 442 --------RGSM---CQACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 489
Query: 123 KLFC 126
K +C
Sbjct: 490 KPYC 493
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S SC+ C+KP++ + ++ L R WH + C +C L + F ++G+ +C +
Sbjct: 260 GVPTSSKGSCSACQKPVVGQ-VVTALGRVWHPEHFVCSECETELGSRNFFEKDGQPYCES 318
Query: 129 DFF 131
D+F
Sbjct: 319 DYF 321
>gi|301756737|ref|XP_002914217.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Ailuropoda melanoleuca]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC E ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|149755774|ref|XP_001493379.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Equus
caballus]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|6754538|ref|NP_034840.1| LIM/homeobox protein Lhx2 [Mus musculus]
gi|157817308|ref|NP_001100041.1| LIM/homeobox protein Lhx2 [Rattus norvegicus]
gi|8134552|sp|Q9Z0S2.1|LHX2_MOUSE RecName: Full=LIM/homeobox protein Lhx2; Short=Homeobox protein
LH-2; Short=LIM homeobox protein 2
gi|4406516|gb|AAD20012.1| LIM-homeodomain protein MLHX2 [Mus musculus]
gi|26343551|dbj|BAC35432.1| unnamed protein product [Mus musculus]
gi|33416474|gb|AAH55741.1| LIM homeobox protein 2 [Mus musculus]
gi|149047902|gb|EDM00518.1| LIM homeobox protein 2 (predicted) [Rattus norvegicus]
Length = 406
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|426223060|ref|XP_004005697.1| PREDICTED: LIM/homeobox protein Lhx2 [Ovis aries]
Length = 404
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|311253923|ref|XP_003125689.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Sus
scrofa]
Length = 382
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|195398101|ref|XP_002057663.1| GJ17978 [Drosophila virilis]
gi|194141317|gb|EDW57736.1| GJ17978 [Drosophila virilis]
Length = 597
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 364 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 421
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C + F R
Sbjct: 422 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHER 464
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 465 DGKPYCRNDYF 475
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C + F R+GK +CRND+F
Sbjct: 423 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYFE----- 476
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 477 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 525
Query: 123 KLFCRNDF 130
+C +
Sbjct: 526 LPYCETHY 533
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 482 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 540
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 541 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 584
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 585 KPYCHACF 592
>gi|195115190|ref|XP_002002147.1| GI17221 [Drosophila mojavensis]
gi|193912722|gb|EDW11589.1| GI17221 [Drosophila mojavensis]
Length = 605
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 372 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 429
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C + F R
Sbjct: 430 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHER 472
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 473 DGKPYCRNDYF 483
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C + F R+GK +CRND+F
Sbjct: 431 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRNDYFE----- 484
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 485 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 533
Query: 123 KLFCRNDF 130
+C +
Sbjct: 534 LPYCETHY 541
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 490 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 548
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 549 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 592
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 593 KPYCHACF 600
>gi|66804241|gb|AAY56681.1| unknown [Drosophila melanogaster]
Length = 154
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 48 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDY----- 101
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 102 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 150
Query: 122 G 122
G
Sbjct: 151 G 151
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 19/117 (16%)
Query: 17 LLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCGVGLSSSM 75
++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 1 MITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER---------------Y 45
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDF 130
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 46 TYTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDY 101
>gi|281348858|gb|EFB24442.1| hypothetical protein PANDA_002084 [Ailuropoda melanoleuca]
Length = 368
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 21 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 74
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC E ++F++ + +H C C C L D+ +E
Sbjct: 75 ---------LFAVKCGGCFEAVAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 125
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 126 GQLLCKGDY 134
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 39/69 (56%)
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
R PS VG + S C GC++ I D+FLL + + WH CV+C C L CF R+
Sbjct: 4 RRPSIAAVGRAVSPKSVCEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRD 63
Query: 122 GKLFCRNDF 130
KL+C+ D+
Sbjct: 64 KKLYCKYDY 72
>gi|19921620|ref|NP_610098.1| CG31988 [Drosophila melanogaster]
gi|17861390|gb|AAL39172.1| GH01042p [Drosophila melanogaster]
gi|22946985|gb|AAN11104.1| CG31988 [Drosophila melanogaster]
gi|220944672|gb|ACL84879.1| CG31988-PA [synthetic construct]
gi|220954480|gb|ACL89783.1| CG31988-PA [synthetic construct]
Length = 178
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 62/121 (51%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL+K + + E +WH DC C C L+++ F
Sbjct: 62 -------------YTYTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKKDY 118
>gi|395530698|ref|XP_003767425.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Sarcophilus
harrisii]
Length = 382
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|390468263|ref|XP_002753104.2| PREDICTED: paxillin [Callithrix jacchus]
Length = 965
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 732 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 789
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 790 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 832
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 833 DGKAYCRKDYF 843
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 791 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 846
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 847 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 893
Query: 123 KLFC 126
+ +C
Sbjct: 894 QPYC 897
>gi|328715997|ref|XP_001946565.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 407
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 55/131 (41%), Gaps = 17/131 (12%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
SC GC I+D+FL+ V +WH CV C C L+ C+ R L+C+ND+ R
Sbjct: 32 SCEGCGTKIVDRFLMRVGTSSWHEQCVTCSACGVPLAKSCYYRHNGLYCKNDYDRLFGVK 91
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK----CFS 119
CG L + L+ AG +H C C C L +
Sbjct: 92 CGRCGEPLGARELVMRAGP-------------SHVYHVGCFACVACMQPLQKGQQYVVKA 138
Query: 120 REGKLFCRNDF 130
G+LFCR DF
Sbjct: 139 GGGQLFCRTDF 149
>gi|348570106|ref|XP_003470838.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Cavia porcellus]
Length = 404
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 112 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDSLVYCRLHF 168
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 44 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 103
Query: 129 DFF 131
D++
Sbjct: 104 DYY 106
>gi|70570020|dbj|BAE06522.1| transcription factor protein [Ciona intestinalis]
Length = 402
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLER-TWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC PI D+++L V WHA C++C DC L + CF R+GK +C+ D+ R
Sbjct: 40 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTRLFG 99
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ CG+ S + F++ ++ +H C +C C L D+
Sbjct: 100 TKCNKCGLCFSK--------------NDFVMRARDKIYHIQCFKCVACSRQLIPGDEFAL 145
Query: 120 REGKLFCRND 129
R+ LFC+ D
Sbjct: 146 RDDGLFCKAD 155
Score = 51.6 bits (122), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVLER-TWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC PI D+++L V WHA C++C DC L + C F R+GK +C+ D+
Sbjct: 40 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDY 94
>gi|395505659|ref|XP_003757157.1| PREDICTED: LIM/homeobox protein Lhx2 [Sarcophilus harrisii]
Length = 408
Score = 65.5 bits (158), Expect = 6e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>gi|194747127|ref|XP_001956004.1| GF24815 [Drosophila ananassae]
gi|190623286|gb|EDV38810.1| GF24815 [Drosophila ananassae]
Length = 613
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I D+FL+NV E WH C+ C C L C+ R KL+C+ D+ R
Sbjct: 249 CEGCGQKIHDRFLMNVGEANWHEQCLACCYCGLQLHHTCYVRNSKLYCKMDYDR------ 302
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL--NVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ CA C IL + L+ + +H C CY C L ++ R
Sbjct: 303 ---------LFGVKCASCCHAILPQELVMRPIPNFVFHLPCFVCYACRLPLQKGEQFLLR 353
Query: 121 EGKLFC-RNDF 130
+G+LFC R+D
Sbjct: 354 DGQLFCYRHDL 364
>gi|345487079|ref|XP_001599685.2| PREDICTED: LIM/homeobox protein Lhx9-like [Nasonia vitripennis]
Length = 406
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR-S 59
++C GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D++R
Sbjct: 44 LACGGCGREIAERWYLRAADRPWHCGCLRCCHCRLPLAAELTCFARDGNIYCKEDYYRLF 103
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
V S C G+S++ L+ + + +H C C C L+ D
Sbjct: 104 AVSRCSRCRAGISATELV--------------MRARDLVYHVACFTCASCGTPLNKGDHF 149
Query: 118 FSREGKLFCR 127
R+G ++CR
Sbjct: 150 GQRDGLVYCR 159
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRND 129
SS ++C GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D
Sbjct: 39 SSGPSLACGGCGREIAERWYLRAADRPWHCGCLRCCHCRLPLAAELTCFARDGNIYCKED 98
Query: 130 FF 131
++
Sbjct: 99 YY 100
>gi|431914265|gb|ELK15523.1| Paxillin [Pteropus alecto]
Length = 562
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 390 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 441
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 442 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 492
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 493 KAYCRKDYF 501
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/103 (32%), Positives = 48/103 (46%), Gaps = 18/103 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 449 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 504
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRC 106
CG GC + IL+ + ++ L WH +C C
Sbjct: 505 APKCG------------GCARAILENY-ISALNTLWHPECFVC 534
>gi|56185681|gb|AAV84105.1| apterous [Euprymna scolopes]
Length = 423
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR-SPV 61
CAGC I +++ LNV WH +C++CY+C TL + C+ R G +CR+D+ R
Sbjct: 92 CAGCGDLITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDYQRLFST 151
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+ S+ L+ + +H C C+ C+ L D
Sbjct: 152 QRCARCNMGIQSTDLV--------------MRARNHVYHLTCFTCFTCNKALQAGDTFGL 197
Query: 120 REGKLFCR 127
RE ++C+
Sbjct: 198 REHLVYCQ 205
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 22/54 (40%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDF 130
CAGC I +++ LNV WH +C++CY+C TL + C+ R G +CR+D+
Sbjct: 92 CAGCGDLITERYYLNVANNAWHFNCLKCYECKSTLDTERSCYERMGNYYCRDDY 145
>gi|354498706|ref|XP_003511455.1| PREDICTED: LIM/homeobox protein Lhx2-like [Cricetulus griseus]
Length = 475
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 126 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 185
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 186 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 231
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 232 KDSLVYCRLHF 242
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 118 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 177
Query: 129 DFF 131
D++
Sbjct: 178 DYY 180
>gi|225708480|gb|ACO10086.1| LIM domain transcription factor LMO4 [Osmerus mordax]
Length = 159
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH C++C CH L D C+S+ G + CR+D+ R
Sbjct: 15 SCAGCGGKIGDRFLLYSMERYWHTRCLKCSCCHAQLGDIGTSCYSKGGMILCRSDYIRL- 73
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S +C+ C + I ++ ++ +H C C C + L D+
Sbjct: 74 --------FGHSG----ACSACGQSIPANEMVMRAQGNVYHLKCFSCATCRNRLVPGDRF 121
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 122 HYVNGTIFCEHD 133
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
SCAGC I D+FLL +ER WH C++C CH L D C+S+ G + CR+D+
Sbjct: 15 SCAGCGGKIGDRFLLYSMERYWHTRCLKCSCCHAQLGDIGTSCYSKGGMILCRSDYI 71
>gi|157119548|ref|XP_001659418.1| lim homeobox protein [Aedes aegypti]
gi|108875286|gb|EAT39511.1| AAEL008685-PA [Aedes aegypti]
Length = 345
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 64/127 (50%), Gaps = 19/127 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L V +R WH C+RC C L + C++REG ++C++D++R
Sbjct: 16 CAGCGISIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDYYRHFSS 75
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
R + CG G+S+S L+ + + +H +C C C L D
Sbjct: 76 RRCARCGSGISASELV--------------MRAKDLIFHVNCFSCTICGQLLRGGDTAGI 121
Query: 120 REGKLFC 126
R+G++FC
Sbjct: 122 RDGRIFC 128
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L V +R WH C+RC C L + C++REG ++C++D++
Sbjct: 16 CAGCGISIRDRYYLLVADRAWHNQCLRCCKCLANLETELSCYAREGNIYCKDDYY 70
>gi|328925120|dbj|BAK19075.1| Bmptp-Z and Bmap-A fusion protein beta [Bombyx mori]
Length = 444
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR--SP 60
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+ R P
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIRLYGP 191
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
R CA C I + ++ + +H C C C+ L+ D
Sbjct: 192 KR----------------CARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTY 235
Query: 118 FSREGKLFCR 127
R+ ++CR
Sbjct: 236 GIRDAAVYCR 245
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDF 130
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 185
>gi|328925118|dbj|BAK19074.1| Bmptp-Z and Bmap-A fusion protein alpha [Bombyx mori]
Length = 466
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR--SP 60
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+ R P
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIRLYGP 191
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
R CA C I + ++ + +H C C C+ L+ D
Sbjct: 192 KR----------------CARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTY 235
Query: 118 FSREGKLFCR 127
R+ ++CR
Sbjct: 236 GIRDAAVYCR 245
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDF 130
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+
Sbjct: 132 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 185
>gi|226479796|emb|CAX73194.1| Paxillin [Schistosoma japonicum]
Length = 541
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 64/130 (49%), Gaps = 20/130 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRSPVR 62
C C + +++K +L L R WH + CY+CH T + E GKL+C + +F R
Sbjct: 366 CGYCGEAVIEKCVL-ALARAWHPEHFFCYECHSTFNGSLTVHEQNGKLYCSDCYF---TR 421
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-E 121
F + C+GC++PI D + + L WH DC C+DC+ L+ F +
Sbjct: 422 FGT------------PCSGCQQPITDAY-ITALNMPWHKDCFTCHDCNKILTGSNFHEFD 468
Query: 122 GKLFCRNDFF 131
G +C + ++
Sbjct: 469 GYPYCDSHYY 478
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 35/128 (27%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRSPVRF 63
C+GC++PI D ++ L WH DC C+DC+ L+ F +G +C + ++
Sbjct: 426 CSGCQQPITDAYI-TALNMPWHKDCFTCHDCNKILTGSNFHEFDGYPYCDSHYY------ 478
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
S + C C PI + +N L + +H + C C H L F G
Sbjct: 479 ---------SRRGLLCVSCSLPITGR-CVNALGKRYHPEHFLCAYCLHPLQTGTFKEHSG 528
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 529 KPYCHQCF 536
>gi|170053181|ref|XP_001862556.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
gi|167873811|gb|EDS37194.1| insulin protein enhancer protein isl [Culex quinquefasciatus]
Length = 438
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +CH L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGTQIHDQYILRVAPDLEWHAACLKCQECHQFLDESCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDC--HHTLSDKCFS 119
CG S + F++ + +H +C RC C H D+
Sbjct: 87 TKCDKCGNSFSK--------------NDFVMRAKSKIYHIECFRCSLCMKHLQPGDEFAL 132
Query: 120 RE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 133 RDGGALYCKED 143
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKL 124
G+ L C GC I D+++L V + WHA C++C +CH L + C F R+GK
Sbjct: 16 GLSREKERLSLCVGCGTQIHDQYILRVAPDLEWHAACLKCQECHQFLDESCTCFVRDGKT 75
Query: 125 FCRNDF 130
+C+ D+
Sbjct: 76 YCKRDY 81
>gi|42415525|ref|NP_963882.1| paxillin [Danio rerio]
gi|41350255|gb|AAS00452.1| paxillin [Danio rerio]
Length = 533
Score = 65.1 bits (157), Expect = 8e-09, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + RTWH + C C + S F R+G+ +C D+
Sbjct: 300 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDY------- 351
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L++TWH + C C + F +EG
Sbjct: 352 --------HSLFSPRCYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEG 402
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 403 KAYCRKDYF 411
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F +EGK +CR D+F F
Sbjct: 359 CYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYFD---MF 414
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 415 APKCG------------GCARAILENY-ISALNSLWHPECFVCRECFTPFVNGSFFEHEG 461
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 462 QPYCEAHY 469
Score = 43.9 bits (102), Expect = 0.023, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 418 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHERRGSL 476
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 477 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 520
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 521 KPYCQSCF 528
>gi|50344739|ref|NP_001002043.1| islet1, like [Danio rerio]
gi|37682137|gb|AAQ97995.1| ISL1 transcription factor, LIM/homeodomain [Danio rerio]
Length = 323
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 21/128 (16%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC ILD+F++ V + WHA C++C +CH L + CF R+GK FCR + R
Sbjct: 19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSR--- 75
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDK-FLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
LS+S CA C+K + K F++ +H C RC C+ L D+
Sbjct: 76 ---------LSTS---KCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDEYV 123
Query: 119 SREGKLFC 126
++G+L C
Sbjct: 124 LQDGQLLC 131
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC ILD+F++ V + WHA C++C +CH L + C F R+GK FCR +
Sbjct: 19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHY 73
>gi|301618805|ref|XP_002938795.1| PREDICTED: LIM/homeobox protein Lhx2-like [Xenopus (Silurana)
tropicalis]
Length = 419
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 133
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 134 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCNTCNKMLTTGDHFGM 179
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 180 KDNLVYCRLHF 190
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 66 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 125
Query: 129 DFF 131
D++
Sbjct: 126 DYY 128
>gi|344295346|ref|XP_003419373.1| PREDICTED: paxillin-like [Loxodonta africana]
Length = 692
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 459 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 516
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 517 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 559
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 560 DGKAYCRKDYF 570
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 518 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 573
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 574 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 620
Query: 123 KLFC 126
+ +C
Sbjct: 621 QPYC 624
>gi|354467036|ref|XP_003495977.1| PREDICTED: paxillin-like [Cricetulus griseus]
Length = 723
Score = 65.1 bits (157), Expect = 9e-09, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 490 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 541
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 542 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 592
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 593 KAYCRKDYF 601
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 549 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 604
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 605 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 651
Query: 123 KLFC 126
+ +C
Sbjct: 652 QPYC 655
>gi|328709646|ref|XP_001945795.2| PREDICTED: paxillin-like isoform 3 [Acyrthosiphon pisum]
Length = 474
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + LE+TWH + C C ++ F REG+ +C++D+F
Sbjct: 300 CAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHEREGRPYCKDDYF------ 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC +PI++ + ++ L WH+ C C DC +S + F E
Sbjct: 353 ---------DMFAPKCGGCTRPIMENY-VSALSTQWHSSCFVCRDCRMPFVSGQFFDHES 402
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 403 QPYCETHY 410
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 62/131 (47%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+K I+ + ++ L +TWH + C C L + F REG+ +C D+ SP
Sbjct: 241 CTACDKAIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFEREGRPYCEPDYHNLFSP- 298
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + LE+TWH + C C ++ F R
Sbjct: 299 ----------------RCAYCNGPILDK-CVTALEKTWHTEHFFCAQCGKQFGEEGFHER 341
Query: 121 EGKLFCRNDFF 131
EG+ +C++D+F
Sbjct: 342 EGRPYCKDDYF 352
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC +PI++ ++ + L WH+ C C DC +S + F E + +C +
Sbjct: 359 CGGCTRPIMENYV-SALSTQWHSSCFVCRDCRMPFVSGQFFDHESQPYCETHYHAKRGSL 417
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + ++ +H + C C L+ F +
Sbjct: 418 ---------------CAGCHKPIAGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQNE 461
Query: 123 KLFC 126
K +C
Sbjct: 462 KPYC 465
>gi|194759133|ref|XP_001961804.1| GF15150 [Drosophila ananassae]
gi|190615501|gb|EDV31025.1| GF15150 [Drosophila ananassae]
Length = 178
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL++ + + E +WH C C C L+D+ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILERTICAMGE-SWHEGCFCCGGACKKPLADQPFYERDGKAYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D ++ + WH DC RC C + ++ + F+ E
Sbjct: 119 ----------EDMFAARCAKCEKPITDSAVI-AMNVKWHRDCFRCNKCENPITTQTFTIE 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C + I K ++ L +TWH + C C + D F+ ++G+ C F
Sbjct: 5 IVCHKCNEAIT-KRMITALGKTWHPEHFLCRHCEEQIEDATFNIQDGEPVCSKCFVERYT 63
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL++ + + E +WH C C C L+D+ F
Sbjct: 64 H---------------TCAGCKKPILERTICAMGE-SWHEGCFCCGGACKKPLADQPFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKAYCKQDY 118
>gi|291290877|ref|NP_001167469.1| LIM homeobox 2 [Xenopus laevis]
gi|37720481|gb|AAN41461.1| LIM homeobox protein 2 [Xenopus laevis]
Length = 419
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/131 (25%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 74 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 133
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 134 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCNTCNKMLTTGDHFGM 179
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 180 KDNLVYCRLHF 190
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 66 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 125
Query: 129 DFF 131
D++
Sbjct: 126 DYY 128
>gi|241613226|ref|XP_002407362.1| Paxillin, putative [Ixodes scapularis]
gi|215502782|gb|EEC12276.1| Paxillin, putative [Ixodes scapularis]
Length = 563
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK + L++TWH + C C + F ++GK +C+ D+F F
Sbjct: 389 CAYCNGPILDK-CVTALDKTWHPEHFFCAQCGKQFGEGGFHEKDGKPYCKEDYFE---LF 444
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG GC +PI + + ++ L WH +C C DC + F EG
Sbjct: 445 APKCG------------GCNRPITENY-ISALNGQWHPECFVCRDCRQPFNGGSFYDHEG 491
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 492 QPYCETHY 499
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C+ C KPI+ + ++ L RTWH + C C+ L K F R+ + +C D+ SP
Sbjct: 330 CSACNKPIVGQ-VVTALGRTWHPEHFTCAHCNQELGTKNFFERDNEPYCETDYHNIFSP- 387
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + L++TWH + C C + F +
Sbjct: 388 ----------------RCAYCNGPILDK-CVTALDKTWHPEHFFCAQCGKQFGEGGFHEK 430
Query: 121 EGKLFCRNDFF 131
+GK +C+ D+F
Sbjct: 431 DGKPYCKEDYF 441
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC +PI + ++ + L WH +C C DC + F EG+ +C +
Sbjct: 448 CGGCNRPITENYI-SALNGQWHPECFVCRDCRQPFNGGSFYDHEGQPYCETHYHAKRGSL 506
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
CAGC KPI + + + R +H + C C L+ F +
Sbjct: 507 ---------------CAGCHKPITGR-CITAMFRKYHPEHFVCSFCLGQLNKGTFKEQND 550
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 551 KPYCHACF 558
>gi|320162830|gb|EFW39729.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 1989
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 52/115 (45%), Gaps = 18/115 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PI+ + + ++ WH +C C C L D+ F SR G +C D+
Sbjct: 1869 CFKCRLPIVGEMVF-AIDNQWHQECFNCEVCKKNLKDQDFLSRNGFPYCEADY------- 1920
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF 118
++ SC C+K ILD+ +++ L WH C C DC L+D+ F
Sbjct: 1921 --------AAKFFASCHACKKQILDE-VVSALGSRWHVACFVCQDCKTPLADQTF 1966
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF 44
SC C+K ILD+ +++ L WH C C DC L+D+ F
Sbjct: 1927 SCHACKKQILDE-VVSALGSRWHVACFVCQDCKTPLADQTF 1966
>gi|229619794|dbj|BAH58095.1| LIM homeodomain protein [Halocynthia roretzi]
Length = 521
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 70/131 (53%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC PILDK+++ V E WH++CV+C DC L++KC++R +C+ +FR R+
Sbjct: 12 CRGCCTPILDKYIICVNEHAWHSECVKCQDCGKELTEKCYTRYDCFYCKFHYFR---RYG 68
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTL--SDKCF-SR 120
CAGC + I+ D + ++ + +H C+ C +C TL DK + +
Sbjct: 69 P------------DCAGCLQKIMPDNVVHHLRDLIFHEACLSCSECSRTLVTGDKMYWNA 116
Query: 121 EGKLFCRNDFF 131
++ C N ++
Sbjct: 117 NSEVICENHYW 127
>gi|328925128|dbj|BAK19079.1| apterous A splicing isoform type B [Bombyx mori]
Length = 398
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR--SP 60
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+ R P
Sbjct: 64 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDYIRLYGP 123
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
R CA C I + ++ + +H C C C+ L+ D
Sbjct: 124 KR----------------CARCNTVISASELVMRARDLVFHVHCFSCALCNTPLNKGDTY 167
Query: 118 FSREGKLFCR 127
R+ ++CR
Sbjct: 168 GIRDAAVYCR 177
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 2/54 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDF 130
CAGC I D++ L LER WH C+RC +C L +C++R+ +FC+ND+
Sbjct: 64 CAGCGCRITDRYYLLALERRWHTPCLRCCECKMPLDSEQRCYARDSNIFCKNDY 117
>gi|508712|gb|AAB08752.1| LIM-homeobox domain protein [Homo sapiens]
Length = 423
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/131 (25%), Positives = 66/131 (50%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
C GC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 52 CGGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 112 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDSLVYCRLHF 168
Score = 53.1 bits (126), Expect = 3e-05, Method: Composition-based stats.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS C GC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 44 ISSDRAALCGGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 103
Query: 129 DFF 131
D++
Sbjct: 104 DYY 106
>gi|47206717|emb|CAG12297.1| unnamed protein product [Tetraodon nigroviridis]
Length = 137
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 58/132 (43%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCH---HTLSDKCFSREGKLFCRNDFFRSP 60
+CAGC I D+FLL +ER WH C+RC CH LS C+SR G + CR+D+ R
Sbjct: 2 TCAGCGGRIADRFLLFSMERYWHTRCLRCSCCHAQLGALSRSCYSRGGLILCRDDYAR-- 59
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+C C + I + ++ +H C C C H L D+
Sbjct: 60 -----------LFGHAGACGACGQTIPPSEMVMRAQGSVYHLKCFACATCRHRLVPGDRF 108
Query: 118 FSREGKLFCRND 129
G +FC D
Sbjct: 109 HYVNGSVFCEQD 120
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 35/56 (62%), Gaps = 3/56 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCH---HTLSDKCFSREGKLFCRNDF 130
+CAGC I D+FLL +ER WH C+RC CH LS C+SR G + CR+D+
Sbjct: 2 TCAGCGGRIADRFLLFSMERYWHTRCLRCSCCHAQLGALSRSCYSRGGLILCRDDY 57
>gi|322785895|gb|EFZ12514.1| hypothetical protein SINV_13953 [Solenopsis invicta]
Length = 144
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I DK+++ V ER +H +C+ C C LS CF R+ KL+CR D+ R
Sbjct: 18 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRTDYER------ 71
Query: 65 SGCGVGLSSSMLISCAGCEKPI--LDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSR 120
+ CA C + I D + V +H +C C C +L R
Sbjct: 72 ---------IFGVKCARCMEKISCSDLVMRPVSGLIFHVECFACCMCGQSLPRGAHYILR 122
Query: 121 EGKLFCRNDF 130
+G+ CR DF
Sbjct: 123 QGQPICRRDF 132
>gi|195388476|ref|XP_002052906.1| GJ19592 [Drosophila virilis]
gi|194149363|gb|EDW65061.1| GJ19592 [Drosophila virilis]
Length = 181
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CA C+KPIL++ + + E WH C C C LS++ F R+GK +C+ D+
Sbjct: 68 TCAACKKPILERTICAMGE-NWHESCFVCDGACKKPLSNRPFYERDGKAYCKQDY----- 121
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+ CA CEKPI D ++ + WH DC RC C + ++ + F+ E
Sbjct: 122 ----------EDMFAVRCAKCEKPITDSAIV-AMNAKWHRDCFRCNRCENPITSQTFTIE 170
Query: 122 G 122
G
Sbjct: 171 G 171
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C + I K ++ L +TWH + C C + D F+ ++G+ C + F
Sbjct: 8 IVCHKCNETIT-KRVITALGKTWHPEHFLCRHCDKQIEDATFNIQDGEPVCSDCFVE--- 63
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
R+ S +CA C+KPIL++ + + E WH C C C LS++ F
Sbjct: 64 RYTS------------TCAACKKPILERTICAMGE-NWHESCFVCDGACKKPLSNRPFYE 110
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 111 RDGKAYCKQDY 121
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG 48
+ CA CEKPI D ++ + WH DC RC C + ++ + F+ EG
Sbjct: 127 VRCAKCEKPITDSAIV-AMNAKWHRDCFRCNRCENPITSQTFTIEG 171
>gi|443683990|gb|ELT88059.1| hypothetical protein CAPTEDRAFT_51440, partial [Capitella teleta]
Length = 54
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
C GC I D+F + VL++ WH CV+C DC L D C++RE KL+C++DFF+
Sbjct: 1 CIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDFFK 54
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC I D+F + VL++ WH CV+C DC L D C++RE KL+C++DFF
Sbjct: 1 CIGCGSEISDRFFMTVLDQAWHTHCVQCADCGEKLIDSCYTREKKLYCKSDFF 53
>gi|348505324|ref|XP_003440211.1| PREDICTED: LIM domain transcription factor LMO4.1-like [Oreochromis
niloticus]
Length = 198
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL---SDKCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH C++C CH L S C+S+ G + C+ND+ R
Sbjct: 24 SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQLGEYSSTCYSKGGMILCKNDYIRL- 82
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S +C+ C + I + ++ +H C C C + L D+
Sbjct: 83 --------FGHSG----ACSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 130
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 131 HYVNGTIFCEHD 142
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 54 NDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
N +P G G G + SCAGC I D+FLL +ER WH C++C CH L
Sbjct: 3 NSRVEAPTVAVMGSGGGTAGR---SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQL 59
Query: 114 ---SDKCFSREGKLFCRNDFF 131
S C+S+ G + C+ND+
Sbjct: 60 GEYSSTCYSKGGMILCKNDYI 80
>gi|328779726|ref|XP_001120677.2| PREDICTED: LIM homeobox transcription factor 1-beta-like [Apis
mellifera]
Length = 402
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+DK+++ V R +H +C+ C C L CF RE KL+CR D+ R
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIHSCFIRELKLYCRTDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSRE 121
+ CA C EK F+L +H +C C C L F R+
Sbjct: 112 ---------IFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYFLRQ 162
Query: 122 GKLFCRNDF 130
G+ CR D+
Sbjct: 163 GQPICRRDY 171
>gi|395834082|ref|XP_003790044.1| PREDICTED: paxillin [Otolemur garnettii]
Length = 637
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 404 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 461
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 462 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 504
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 505 DGKAYCRKDYF 515
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 463 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 518
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 519 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 565
Query: 123 KLFC 126
+ +C
Sbjct: 566 QPYC 569
>gi|291407054|ref|XP_002719862.1| PREDICTED: paxillin-like [Oryctolagus cuniculus]
Length = 787
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 554 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 611
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 612 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 654
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 655 DGKAYCRKDYF 665
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 613 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 668
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 669 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 715
Query: 123 KLFC 126
+ +C
Sbjct: 716 QPYC 719
>gi|195440764|ref|XP_002068210.1| GK10148 [Drosophila willistoni]
gi|194164295|gb|EDW79196.1| GK10148 [Drosophila willistoni]
Length = 636
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I D++L+NV E WH C+ C C L C+ R KL+C+ D+ R
Sbjct: 270 CEGCGQKIHDRYLMNVGEANWHEQCLACCYCGMQLHHTCYVRNSKLYCKLDYDR------ 323
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLL--NVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ CA C IL + L+ + +H C CY C L ++ R
Sbjct: 324 ---------LFGVKCAACCHAILPQELVMRPIPNYVFHLPCFVCYACRLPLQKGEQFMLR 374
Query: 121 EGKLFC-RNDF 130
+G+LFC R+D
Sbjct: 375 DGQLFCFRHDL 385
>gi|339236693|ref|XP_003379901.1| u4/U6.U5 tri-snRNP-associated protein 1 [Trichinella spiralis]
gi|316977351|gb|EFV60461.1| u4/U6.U5 tri-snRNP-associated protein 1 [Trichinella spiralis]
Length = 1114
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 55/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRF 63
CA C PI DK + ++RTWH + C C ++ F G+ FCR D+F
Sbjct: 42 CAYCNGPIKDK-CITAMDRTWHPEHFFCAQCGKQFGEEGFHVNNGRPFCRQDYF------ 94
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
+ + C C++P+++ ++ L WH C C+DC + F G
Sbjct: 95 ---------AYFALRCQACQQPLMNNYI-TALNAHWHPHCFACHDCKQPFVGGSFFEHLG 144
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 145 EPYCETHY 152
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/111 (29%), Positives = 45/111 (40%), Gaps = 22/111 (19%)
Query: 25 WHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPVRFPSGCGVGLSSSMLISCAG 81
WH + C C L + F R +C ND+ R SP CA
Sbjct: 2 WHPEHFVCAHCGQELGRQNFYERACNAYCENDYHRLFSP-----------------RCAY 44
Query: 82 CEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFF 131
C PI DK + ++RTWH + C C ++ F G+ FCR D+F
Sbjct: 45 CNGPIKDK-CITAMDRTWHPEHFFCAQCGKQFGEEGFHVNNGRPFCRQDYF 94
Score = 36.2 bits (82), Expect = 4.3, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDF 56
+ C C++P+++ ++ L WH C C+DC + F G+ +C +
Sbjct: 99 LRCQACQQPLMNNYI-TALNAHWHPHCFACHDCKQPFVGGSFFEHLGEPYCETHY 152
>gi|432092846|gb|ELK25212.1| Paxillin [Myotis davidii]
Length = 645
Score = 64.3 bits (155), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + RTWH + C C + S F R+G+ +C D+ SP
Sbjct: 412 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHTLFSP- 469
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 470 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 512
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 513 DGKAYCRKDYF 523
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 471 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 526
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 527 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 573
Query: 123 KLFC 126
+ +C
Sbjct: 574 QPYC 577
>gi|213514790|ref|NP_001133458.1| LIM domain transcription factor LMO4.1 [Salmo salar]
gi|209154084|gb|ACI33274.1| LIM domain transcription factor LMO4.1 [Salmo salar]
Length = 168
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 63/132 (47%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH C++C CH L + C+S+ G + C+ND+ R
Sbjct: 24 SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQLGEIGTTCYSKGGMILCKNDYIR-- 81
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 82 LFGHSG-----------ACSACGQSIPASEMVMRAQGNVYHLKCFTCATCRNRLVPGDRF 130
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 131 HYVNGTIFCEHD 142
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
SCAGC I D+FLL +ER WH C++C CH L + C+S+ G + C+ND+
Sbjct: 24 SCAGCGGRIADRFLLFSMERYWHTRCLKCSCCHAQLGEIGTTCYSKGGMILCKNDYI 80
>gi|432875334|ref|XP_004072790.1| PREDICTED: paxillin-like [Oryzias latipes]
Length = 526
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C KPI+ + ++ + RTWH + C C + + F REG+ +C D+ SP
Sbjct: 293 CGACCKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFEREGQPYCEKDYHNLFSP- 350
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 351 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEK 393
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 394 DGKAYCRNDYF 404
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CRND+F
Sbjct: 352 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRNDYF------ 404
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 405 ---------DMFAPKCGGCARAILENY-ISALNCLWHPECFVCRECFTPFVNGSFFEHDG 454
Query: 123 KLFCR 127
+ +C
Sbjct: 455 QPYCE 459
>gi|402580740|gb|EJW74689.1| hypothetical protein WUBG_14403, partial [Wuchereria bancrofti]
Length = 126
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 14/109 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C+ CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C++ F++
Sbjct: 17 CSKCEEPIRDRFVLKVLDRSFHPHCLRCVYCEQLLSSKCYLKGGQPYCKDHFYKQFGTKC 76
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
S C G+ M++ A E +H C +C C L
Sbjct: 77 SMCDEGICPDMVVRRAN--------------EHVYHVSCFQCIICKREL 111
Score = 58.5 bits (140), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
+ S + C+ CE+PI D+F+L VL+R++H C+RC C LS KC+ + G+ +C+
Sbjct: 6 NINNRSGTVYLCSKCEEPIRDRFVLKVLDRSFHPHCLRCVYCEQLLSSKCYLKGGQPYCK 65
Query: 128 NDFF 131
+ F+
Sbjct: 66 DHFY 69
>gi|344289931|ref|XP_003416694.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain kinase 1-like [Loxodonta
africana]
Length = 628
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 34 CAKLQPEIYDXQYLQALNADWHADCFRCCECGASLSHQYYEKDGQLFCKKDYW---TRYG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + + ++ E +H +C C C + D
Sbjct: 91 E------------SCHGCSEHLTKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 138
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 139 SKLYCGHCYY 148
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S L CA + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 29 SELPVCAKLQPEIYDXQYLQALNADWHADCFRCCECGASLSHQYYEKDGQLFCKKDYW 86
>gi|391339291|ref|XP_003743985.1| PREDICTED: paxillin-like [Metaseiulus occidentalis]
Length = 574
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 64/131 (48%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
CA C+KPI+ + ++ L + WH + C C L + F R+G+ +C D+ + SP
Sbjct: 341 CAACKKPIVGQ-VVTALAKMWHPEHFVCAHCSQELGTRNFYERDGEAYCEQDYHKIFSP- 398
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C+ C PILDK + L+RTWH + C C ++ F +
Sbjct: 399 ----------------RCSYCNGPILDK-CVTALDRTWHPEHFFCAQCGRQFGEEGFHEK 441
Query: 121 EGKLFCRNDFF 131
+GK +CR+D+F
Sbjct: 442 DGKPYCRDDYF 452
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C+ C PILDK + L+RTWH + C C ++ F ++GK +CR+D+F
Sbjct: 400 CSYCNGPILDK-CVTALDRTWHPEHFFCAQCGRQFGEEGFHEKDGKPYCRDDYF------ 452
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S CAGC PI + + ++ L WH +C C DC F EG
Sbjct: 453 ---------SMFAPKCAGCNMPITENY-ISALSMQWHPECFVCRDCLQPFQGGSFYDYEG 502
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 503 QPYCETHY 510
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CAGC PI + ++ + L WH +C C DC F EG+ +C +
Sbjct: 459 CAGCNMPITENYI-SALSMQWHPECFVCRDCLQPFQGGSFYDYEGQPYCETHYH------ 511
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
S+ CAGC KPI + + + R +H + C C L+ F E
Sbjct: 512 ------AKRGSL---CAGCHKPISGR-CITAMFRKYHPEHFVCSFCLKQLNKGTFKEEND 561
Query: 123 KLFCRN 128
K +C +
Sbjct: 562 KPYCHD 567
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRN 128
G++++ CA C+KPI+ + ++ L + WH + C C L + F R+G+ +C
Sbjct: 332 GVTTTAKGCCAACKKPIVGQ-VVTALAKMWHPEHFVCAHCSQELGTRNFYERDGEAYCEQ 390
Query: 129 DF 130
D+
Sbjct: 391 DY 392
>gi|410895897|ref|XP_003961436.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like [Takifugu rubripes]
Length = 479
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 66/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L ++ F ++G+ +C +D+F
Sbjct: 245 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECEAELGNRNFFEKDGRPYCESDYF----- 298
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C D+ F R+
Sbjct: 299 ----------TLFSPHCAHCNKPILNK-MVTALDKNWHPECFCCIKCSRAFGDEGFHDRD 347
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 348 GQQYCQQCFL 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C D+ F R+G+ +C+
Sbjct: 305 CAHCNKPILNK-MVTALDKNWHPECFCCIKCSRAFGDEGFHDRDGQQYCQQ--------- 354
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F EG
Sbjct: 355 ---CFLTLFASR---CQGCSQPILENY-ISALNALWHPQCFVCRECYTPFVNGSFFEHEG 407
Query: 123 KLFCRNDF 130
K C +
Sbjct: 408 KPLCEAHY 415
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F EGK C + +S
Sbjct: 364 CQGCSQPILENYI-SALNALWHPQCFVCRECYTPFVNGSFFEHEGKPLCEAHYHQSRGSV 422
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C C++PIL + + + +H C+ C LS CF +E
Sbjct: 423 ---------------CHACQQPILGR-CVTAMGAKFHPHHFVCHFCLKPLSKGCFKEQEN 466
Query: 123 KLFC 126
K +C
Sbjct: 467 KQYC 470
Score = 42.4 bits (98), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L ++ F ++G+ +C +
Sbjct: 237 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECEAELGNRNFFEKDGRPYCES 295
Query: 129 DFF 131
D+F
Sbjct: 296 DYF 298
>gi|344287033|ref|XP_003415260.1| PREDICTED: LIM homeobox transcription factor 1-alpha [Loxodonta
africana]
Length = 382
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVLCASCKEPLETTCFYRDKKLYCKYDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|351702223|gb|EHB05142.1| Paxillin [Heterocephalus glaber]
Length = 696
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 480 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 537
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 538 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 580
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 581 DGKAYCRKDYF 591
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 539 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 594
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCY---DCHHTLS 114
CG GC + IL+ + ++ L WH +C C + H+T S
Sbjct: 595 APKCG------------GCARAILENY-ISALNTLWHPECFVCRPYCEVHYTTS 635
>gi|449504028|ref|XP_004174562.1| PREDICTED: LOW QUALITY PROTEIN: leupaxin [Taeniopygia guttata]
Length = 340
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI +K +L LE+TWH + C C D+ F R GK +C DF
Sbjct: 166 CAYCAGPIREK-VLTALEQTWHPEHFFCAHCGKMFGDEGFLERNGKPYCHQDFL------ 218
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
+ C GCE+P++D + L+ L+ WH +C C +C + F EG
Sbjct: 219 ---------AMFAPKCQGCERPVVDNY-LSALQGVWHTECFVCTECLTGFTGGSFFELEG 268
Query: 123 KLFCRNDF 130
+ +C F
Sbjct: 269 RPYCELHF 276
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C KPI K +L L +TWH + C C L F + G+ FC D+ +
Sbjct: 107 CAACRKPIAGK-VLTALGKTWHPEHFICARCGQELDKGPYFEQGGQAFCEEDYHQ----- 160
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ CA C PI +K +L LE+TWH + C C D+ F R G
Sbjct: 161 ----------AFSPRCAYCAGPIREK-VLTALEQTWHPEHFFCAHCGKMFGDEGFLERNG 209
Query: 123 KLFCRNDFF 131
K +C DF
Sbjct: 210 KPYCHQDFL 218
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCR 127
+G++++ CA C KPI K +L L +TWH + C C L F + G+ FC
Sbjct: 97 LGITAAPAGVCAACRKPIAGK-VLTALGKTWHPEHFICARCGQELDKGPYFEQGGQAFCE 155
Query: 128 NDF 130
D+
Sbjct: 156 EDY 158
>gi|301789205|ref|XP_002930021.1| PREDICTED: paxillin-like [Ailuropoda melanoleuca]
Length = 597
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 364 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 421
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 422 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 464
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 465 DGKAYCRKDYF 475
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 423 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 478
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 479 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 525
Query: 123 KLFC 126
+ +C
Sbjct: 526 QPYC 529
>gi|194758260|ref|XP_001961380.1| GF13843 [Drosophila ananassae]
gi|190622678|gb|EDV38202.1| GF13843 [Drosophila ananassae]
Length = 469
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
P P + L CAGC + I D+F L+ +E+ WHA C++CY C L C
Sbjct: 129 PPSSPESTNDSKITRNLDECAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSC 188
Query: 118 FSREGKLFCRNDFF 131
+SR+G ++C+ND++
Sbjct: 189 YSRDGNIYCKNDYY 202
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
L CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDECAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>gi|426247778|ref|XP_004017653.1| PREDICTED: paxillin [Ovis aries]
Length = 633
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 400 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 457
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 458 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 500
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 501 DGKAYCRKDYF 511
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 459 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 514
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 515 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVHGSFFEHEG 561
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 562 QPYCEAHY 569
Score = 46.2 bits (108), Expect = 0.004, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 518 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSL 576
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 577 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 620
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 621 KPYCQNCFL 629
>gi|195049931|ref|XP_001992792.1| GH13469 [Drosophila grimshawi]
gi|193899851|gb|EDV98717.1| GH13469 [Drosophila grimshawi]
Length = 585
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 352 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 409
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C + F R
Sbjct: 410 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHER 452
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 453 DGKPYCRTDYF 463
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C + F R+GK +CR D+F
Sbjct: 411 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEDGFHERDGKPYCRTDYFE----- 464
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + I++ + ++ L WH DC C DC F EG
Sbjct: 465 ----------MFAPKCNGCNRAIMENY-ISALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 513
Query: 123 KLFCRNDF 130
+C +
Sbjct: 514 LPYCETHY 521
Score = 43.9 bits (102), Expect = 0.018, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 50/128 (39%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 470 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAKRGSL 528
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CAGC KPI + + + ++ +H + C C L+ F ++
Sbjct: 529 ---------------CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 572
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 573 KPYCHACF 580
>gi|348532921|ref|XP_003453954.1| PREDICTED: PDZ and LIM domain protein 5-like [Oreochromis
niloticus]
Length = 624
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 60/128 (46%), Gaps = 21/128 (16%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+CA C++ IL + ++N L++TWH C C CH + F E G+ +C D++
Sbjct: 506 TCARCQQKILGE-IMNALKQTWHVSCFVCSACHLPIRGNTFHMEDGQPYCEKDYY----- 559
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FS 119
+ +C GC+ PI DKF L L TWH C C C L + FS
Sbjct: 560 ----------NLFGTNCHGCDFPIEAGDKF-LEALGFTWHDTCFVCAVCSTNLEGQAFFS 608
Query: 120 REGKLFCR 127
++ K C+
Sbjct: 609 KKDKPLCK 616
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 57/132 (43%), Gaps = 25/132 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGK----LFCRNDFFRSP 60
C C I FL+ + WH + C C +L+D F EG + C FF +P
Sbjct: 448 CCKCNNIIRGPFLV-AMGMAWHPEEFNCAHCRSSLADHGFVEEGNQVYCVQCYEQFF-AP 505
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR 120
+CA C++ IL + ++N L++TWH C C CH + F
Sbjct: 506 -----------------TCARCQQKILGE-IMNALKQTWHVSCFVCSACHLPIRGNTFHM 547
Query: 121 E-GKLFCRNDFF 131
E G+ +C D++
Sbjct: 548 EDGQPYCEKDYY 559
>gi|284011050|gb|ADB57058.1| IP18656p [Drosophila melanogaster]
Length = 264
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 148 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEM---- 202
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ ++ + L WH DC C DC + K F + EG
Sbjct: 203 -----------FAPKCNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 250
Query: 123 KLFC 126
K C
Sbjct: 251 KPVC 254
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 89 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 146
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 147 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 189
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 190 DGKPYCRNDYF 200
>gi|196000094|ref|XP_002109915.1| expressed hypothetical protein [Trichoplax adhaerens]
gi|190588039|gb|EDV28081.1| expressed hypothetical protein, partial [Trichoplax adhaerens]
Length = 119
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 17/115 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
+CAGC I DK LL ++R WH +C++C C L D KC+ + G + C+ D+ R
Sbjct: 1 TCAGCGTEIRDKHLLLSMDRHWHVNCLKCSCCGIRLDDVATKCYYKSGLILCQRDYIR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS 114
RF SG SCAGC + I D+ +L + +R +H +C C C L+
Sbjct: 59 -RFGSG----------GSCAGCLQAISPDEMVLKLNQRAYHPNCFTCVVCTSRLT 102
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
+CAGC I DK LL ++R WH +C++C C L D KC+ + G + C+ D+
Sbjct: 1 TCAGCGTEIRDKHLLLSMDRHWHVNCLKCSCCGIRLDDVATKCYYKSGLILCQRDYI 57
>gi|301609265|ref|XP_002934210.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GCE+ I D+FLL + + WH C +C C L CF R+ KL+CRND+ + F
Sbjct: 35 CEGCERVICDRFLLRISDSLWHEQCAQCCTCKEPLESSCFYRDKKLYCRNDYEK---LFA 91
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
CG +C P +F++ + +H C C C L D+ ++G
Sbjct: 92 VKCG---------TCLDTITP--SEFVMRAQKNVYHLGCFCCCVCDRQLQKGDEFVLKDG 140
Query: 123 KLFCRNDF 130
+L C++D+
Sbjct: 141 QLLCKSDY 148
>gi|326669829|ref|XP_693520.5| PREDICTED: paxillin-like [Danio rerio]
Length = 532
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C KPI+ + ++ + RTWH + C C + + F REG+ +C D+ SP
Sbjct: 299 CGACSKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFEREGQPYCERDYHHLFSP- 356
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 357 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 399
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 400 DGKAYCRKDYF 410
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 358 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 410
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 411 ---------DLFAPKCGGCARAILENY-ISALSSLWHPECFVCRECFTPFVNGSFFEHDG 460
Query: 123 KLFCR 127
+ +C
Sbjct: 461 QPYCE 465
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C
Sbjct: 417 CGGCARAILENYI-SALSSLWHPECFVCRECFTPFVNGSFFEHDGQPYCE---------- 465
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
V + C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 466 -----VHYHARRGSLCSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 519
Query: 123 KLFCRN 128
K +C+
Sbjct: 520 KPYCQG 525
>gi|4587499|gb|AAD25742.1|AF134379_1 LIM domain kinase 1 splice variant [Homo sapiens]
gi|119590027|gb|EAW69621.1| LIM domain kinase 1, isoform CRA_b [Homo sapiens]
gi|119590028|gb|EAW69622.1| LIM domain kinase 1, isoform CRA_b [Homo sapiens]
Length = 305
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFCRNDFF 131
KL+C + ++
Sbjct: 127 VEHSKLYCGHCYY 139
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|410976790|ref|XP_003994796.1| PREDICTED: paxillin [Felis catus]
Length = 633
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 400 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 457
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 458 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 500
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 501 DGKAYCRKDYF 511
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 459 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 514
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 515 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 561
Query: 123 KLFC 126
+ +C
Sbjct: 562 QPYC 565
>gi|317419358|emb|CBN81395.1| Transforming growth factor beta-1-induced transcript 1 protein
[Dicentrarchus labrax]
Length = 402
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 65/130 (50%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +D+F
Sbjct: 168 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCESDYF----- 221
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C ++ F RE
Sbjct: 222 ----------TLFSPHCAQCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHDRE 270
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 271 GQQYCQQCFL 280
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C ++ F REG+ +C+
Sbjct: 228 CAQCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHDREGQQYCQQ--------- 277
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F EG
Sbjct: 278 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHEG 330
Query: 123 KLFCRNDF 130
C +
Sbjct: 331 NPLCEAHY 338
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 54/124 (43%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F EG C + +S
Sbjct: 287 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHEGNPLCEAHYHQS---- 341
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 342 --------RGSM---CQACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 389
Query: 123 KLFC 126
K +C
Sbjct: 390 KPYC 393
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C +
Sbjct: 160 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCES 218
Query: 129 DFF 131
D+F
Sbjct: 219 DYF 221
>gi|345791188|ref|XP_543425.3| PREDICTED: paxillin [Canis lupus familiaris]
Length = 848
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 615 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 672
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 673 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 715
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 716 DGKAYCRKDYF 726
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 674 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 729
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 730 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 776
Query: 123 KLFC 126
+ +C
Sbjct: 777 QPYC 780
>gi|81902126|sp|Q8VI36.1|PAXI_MOUSE RecName: Full=Paxillin
gi|18461379|gb|AAL71910.1|AF293883_1 paxillin beta [Mus musculus]
Length = 591
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 409
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 410 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|74186063|dbj|BAE34151.1| unnamed protein product [Mus musculus]
Length = 591
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 409
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 410 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|34733869|gb|AAQ81867.1| islet 2 [Ambystoma mexicanum]
Length = 361
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 2 LISCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFR 58
L C GC I D F++ V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 24 LALCVGCGSQIHDPFIMRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYIR 83
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
+ CG+G SSS L+ + ER +H +C RC C+ L D+
Sbjct: 84 LFGVKCAQCGLGFSSSDLV--------------MRARERVYHMECFRCSLCNRQLLPGDE 129
Query: 117 CFSREGKLFCRND 129
RE +L CR +
Sbjct: 130 FCLREHELLCRAE 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 57 FRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD 115
F+ PV P G ++ + C GC I D F++ V + WHA C++C +C L +
Sbjct: 6 FQCPVLGPMGEHPNKKHTLAL-CVGCGSQIHDPFIMRVSPDLEWHAACLKCAECSQYLDE 64
Query: 116 KC--FSREGKLFCRNDFF 131
C F R+GK +C+ D+
Sbjct: 65 TCTCFVRDGKTYCKRDYI 82
>gi|443690540|gb|ELT92649.1| hypothetical protein CAPTEDRAFT_219057 [Capitella teleta]
Length = 432
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C+RC DC+ L + CF R+GK +C+ D+ R
Sbjct: 17 CVGCGSQITDQYILRVAPDLEWHASCLRCTDCNQYLDESCTCFVRDGKTYCKRDYVR--- 73
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
CA C + + F++ + +H DC RC C L D+
Sbjct: 74 ------------LFGTKCARCSQSFSKNDFVMRAKNKIYHIDCFRCIACSRQLIPGDEFA 121
Query: 119 SREGKLFCRND 129
R+ LFC+ D
Sbjct: 122 LRDDGLFCKAD 132
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C+RC DC+ L + C F R+GK +C+ D+
Sbjct: 17 CVGCGSQITDQYILRVAPDLEWHASCLRCTDCNQYLDESCTCFVRDGKTYCKRDYV 72
>gi|114326502|ref|NP_598676.2| paxillin isoform beta [Mus musculus]
gi|157169820|gb|AAI52795.1| Paxillin [synthetic construct]
Length = 591
Score = 63.5 bits (153), Expect = 2e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 409
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 410 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|27374323|gb|AAO01069.1| ap-PA [Drosophila virilis]
Length = 204
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 204
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 38/55 (69%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 131
CAGC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 150 CAGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 204
>gi|443726794|gb|ELU13853.1| hypothetical protein CAPTEDRAFT_107291 [Capitella teleta]
Length = 376
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI+ + ++ L + WH + CY C L + F R+G+ +C D+ SP
Sbjct: 143 CAKCAKPIIGQ-VITGLGKIWHPEHFTCYHCKEELGTQNFFERDGQPYCERDYHNLFSP- 200
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK + L+ TWH + C C + F +
Sbjct: 201 ----------------RCASCGGPILDK-CVTALDTTWHPEHFACEQCGRIFGEGGFHEK 243
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 244 DGKAYCREDYF 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 56/129 (43%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C GC++PI+D ++ + L WH +C CY+C + F EG +C +
Sbjct: 261 CGGCQRPIMDNYI-SALNCQWHPECFVCYECRMPFGAGSFFDHEGMPYCETHYH------ 313
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
S+ CAGC+KPI + + + + +H + C C L+ F +
Sbjct: 314 ------ARRGSL---CAGCQKPITGR-CITAMYKKFHPEHFVCAFCLKQLNKGTFKEQND 363
Query: 123 KLFCRNDFF 131
K +C FF
Sbjct: 364 KPYCHPCFF 372
>gi|148725733|emb|CAN88795.1| paxillin [Danio rerio]
Length = 276
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + RTWH + C C + + F R+G+ +C D+
Sbjct: 43 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDY------- 94
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L++TWH + C C + F +EG
Sbjct: 95 --------HSLFSPRCYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEG 145
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 146 KAYCRKDYF 154
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F +EGK +CR D+F
Sbjct: 102 CYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYF------ 154
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 155 ---------DMFAPKCGGCARAILENY-ISALNSLWHPECFVCRECFTPFVNGSFFEHEG 204
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 205 QPYCEAHY 212
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 161 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHERRGSL 219
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 220 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 263
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 264 KPYCQSCF 271
>gi|327278406|ref|XP_003223953.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like [Anolis carolinensis]
Length = 474
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 62/129 (48%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C+KPI + ++ L TWH + C C + F ++G +C D+F+ F
Sbjct: 241 CASCQKPIAGQ-VVTALGSTWHPEHFVCSHCQKEMGGSNFFEKDGAPYCERDYFQ---LF 296
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG+ C +PILDK ++ L++ WH + C C ++ F ++G
Sbjct: 297 SPRCGL------------CNEPILDK-MVTALDKNWHPEHFCCVKCGRPFGEEGFHEKDG 343
Query: 123 KLFCRNDFF 131
K +CR DF+
Sbjct: 344 KQYCRQDFY 352
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PILDK ++ L++ WH + C C ++ F ++GK +CR DF+
Sbjct: 300 CGLCNEPILDK-MVTALDKNWHPEHFCCVKCGRPFGEEGFHEKDGKQYCRQDFYE----- 353
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C+ + F G
Sbjct: 354 ----------LFSTRCQGCNQAILENY-ISALNALWHPECFVCRECYTPFVNGSFFEHGG 402
Query: 123 KLFCR 127
+ FC
Sbjct: 403 RPFCE 407
Score = 40.8 bits (94), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 51/124 (41%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C+ + F G+ FC + +
Sbjct: 359 CQGCNQAILENYI-SALNALWHPECFVCRECYTPFVNGSFFEHGGRPFCEIHYHKQRGSL 417
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GCEKPI + + + R +H + C C L+ F +
Sbjct: 418 ---------------CSGCEKPITGR-CITAMARKFHPEHFVCAFCLKQLNKGTFKEQND 461
Query: 123 KLFC 126
K +C
Sbjct: 462 KPYC 465
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRN 128
G+S++ CA C+KPI + ++ L TWH + C C + F ++G +C
Sbjct: 232 GISTTAKGLCASCQKPIAGQ-VVTALGSTWHPEHFVCSHCQKEMGGSNFFEKDGAPYCER 290
Query: 129 DFF 131
D+F
Sbjct: 291 DYF 293
>gi|431908581|gb|ELK12174.1| Insulin protein enhancer protein ISL-1 [Pteropus alecto]
Length = 383
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 47 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 106
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 107 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 152
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 153 EFALREDGLFCRAD 166
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 71 LSSSMLIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFC 126
+S LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C
Sbjct: 42 ISEKRLISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYC 101
Query: 127 RNDFF 131
+ D+
Sbjct: 102 KRDYI 106
>gi|85816104|ref|NP_724186.2| paxillin, isoform D [Drosophila melanogaster]
gi|14669824|dbj|BAB62005.1| paxillin-derived LIM-only protein [Drosophila melanogaster]
gi|84795318|gb|AAN11039.2| paxillin, isoform D [Drosophila melanogaster]
Length = 197
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F
Sbjct: 81 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEM---- 135
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I++ ++ + L WH DC C DC + K F + EG
Sbjct: 136 -----------FAPKCNGCNRAIMENYI-SALNSQWHPDCFVCRDCKKAVRGKSFYAMEG 183
Query: 123 KLFC 126
K C
Sbjct: 184 KPVC 187
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+ SP
Sbjct: 22 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHNLFSP- 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C ILDK + L++TWH + C C ++ F R
Sbjct: 80 ----------------RCAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHER 122
Query: 121 EGKLFCRNDFF 131
+GK +CRND+F
Sbjct: 123 DGKPYCRNDYF 133
>gi|326924822|ref|XP_003208624.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-alpha-like [Meleagris gallopavo]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 22 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYEK------ 75
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CAGC + I + ++ + +H C C C L D+ +E
Sbjct: 76 ---------LFAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKE 126
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 127 GQLLCKGDY 135
>gi|328708271|ref|XP_001949712.2| PREDICTED: LIM/homeobox protein Awh-like [Acyrthosiphon pisum]
Length = 346
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 64/133 (48%), Gaps = 18/133 (13%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+ C GC PI D+FLL V ++ WH C+RC C+ L D+ CF ++ ++CR D+ RS
Sbjct: 59 LQCRGCSDPITDRFLLKVSDKIWHVSCLRCCVCNLVLEDEPSCFIKDDSIYCRQDYARSF 118
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
S C G+S+S + A + +H C RC C L+ ++
Sbjct: 119 GTVCSKCSKGISASHWVRKA--------------RDHVYHLACFRCDACDRQLNTGEEFA 164
Query: 119 SREGKLFCRNDFF 131
EG++ C+ +
Sbjct: 165 LHEGRVLCKPHYL 177
>gi|390345308|ref|XP_790548.3| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Strongylocentrotus purpuratus]
Length = 387
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 64/131 (48%), Gaps = 22/131 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ I D++L+ V++ WH C++C C LS CF+R+ KL+C+ D+ + F
Sbjct: 33 CAGCQRAIDDRYLMKVMDHCWHEQCLQCSVCRIRLSHSCFARDRKLYCKLDYEK---LFG 89
Query: 65 SGCGV---GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C + SS L+ + L +H C C C L D+
Sbjct: 90 TKCNACFQSIPSSELV--------------MRALSNVYHLRCFTCVTCDQQLKKGDEFVL 135
Query: 120 REGKLFCRNDF 130
+E +L+C+ D+
Sbjct: 136 KENRLYCKEDY 146
>gi|426384765|ref|XP_004058922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Gorilla gorilla
gorilla]
Length = 393
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|383792181|ref|NP_001244317.1| LIM homeobox transcription factor 1-alpha [Gallus gallus]
Length = 380
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ +
Sbjct: 35 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CAGC + I + ++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCAGCLESIAPSELVMRAQQSVYHLHCFCCCVCERRLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|149058121|gb|EDM09278.1| LIM homeobox transcription factor 1 alpha (predicted) [Rattus
norvegicus]
Length = 263
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|348584446|ref|XP_003477983.1| PREDICTED: paxillin-like [Cavia porcellus]
Length = 660
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 427 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 484
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 485 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 527
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 528 DGKAYCRKDYF 538
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 486 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 541
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 542 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 588
Query: 123 KLFC 126
+ +C
Sbjct: 589 QPYC 592
>gi|57613|emb|CAA37349.1| insulin gene enhancer binding protein [Rattus rattus]
Length = 313
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 10 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 69
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 70 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 115
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 116 EFALREDGLFCRAD 129
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 10 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 69
>gi|358416393|ref|XP_595626.5| PREDICTED: paxillin [Bos taurus]
Length = 621
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 388 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 445
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 446 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 488
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 489 DGKAYCRKDYF 499
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 447 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 502
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 503 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVHGSFFEHEG 549
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 550 QPYCEAHY 557
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 506 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSL 564
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 565 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 608
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 609 KPYCQNCFL 617
>gi|183985542|gb|AAI66037.1| isl1 protein [Xenopus (Silurana) tropicalis]
Length = 335
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYI 72
>gi|28569978|dbj|BAC57891.1| transcription factor islet-1 isoform beta [Mus musculus]
gi|148686420|gb|EDL18367.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_a [Mus
musculus]
Length = 326
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|148707230|gb|EDL39177.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 352
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|348535208|ref|XP_003455093.1| PREDICTED: LIM domain transcription factor LMO4-B-like [Oreochromis
niloticus]
Length = 261
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH C++C C L D C+S+ G + CR+D+ R
Sbjct: 15 SCAGCGGKIADRFLLFSMERYWHTRCLKCSCCQAQLGDIGTTCYSKGGMILCRSDYIRL- 73
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S +C+ C + I ++ ++ +H C C C + L D+
Sbjct: 74 --------FGHSG----ACSACSQSIPANEMVMRAQGNVYHLKCFSCATCRNRLMPGDRF 121
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 122 HYINGTIFCEHD 133
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
SCAGC I D+FLL +ER WH C++C C L D C+S+ G + CR+D+
Sbjct: 15 SCAGCGGKIADRFLLFSMERYWHTRCLKCSCCQAQLGDIGTTCYSKGGMILCRSDYI 71
>gi|45383844|ref|NP_989462.1| LIM domain kinase 1 [Gallus gallus]
gi|82104583|sp|Q8QFP8.1|LIMK1_CHICK RecName: Full=LIM domain kinase 1; Short=LIMK-1; Short=chLIMK1
gi|19912219|dbj|BAB88398.1| LIM kinase 1 [Gallus gallus]
Length = 662
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+L+C+ D++
Sbjct: 23 LPVCASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYW---A 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
RF C GC + I ++ E+ +H +C C +C + D
Sbjct: 80 RFGE------------LCHGCAEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYAL 127
Query: 119 SREGKLFC 126
KL+C
Sbjct: 128 VERSKLYC 135
>gi|390351428|ref|XP_003727657.1| PREDICTED: paxillin-like [Strongylocentrotus purpuratus]
Length = 381
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
CA C+KPI + ++ L +TWH++ C C L + F R+G+ FC D+
Sbjct: 148 CAACQKPIAGQ-IVTALGQTWHSEHFVCAQCQKELGSQTFFERDGQAFCEEDYH------ 200
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ CA C PI D+ + L++TWH + C C T + F + G
Sbjct: 201 ---------NLFAPKCAYCHGPIKDR-CVTALDKTWHPEHFFCAQCGKTFGEDGFHEKNG 250
Query: 123 KLFCRNDFF 131
+ +C+ D+F
Sbjct: 251 RAYCKEDYF 259
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC + I++ F+ L WH +C C DC ++ F +G +C +
Sbjct: 266 CGGCNRAIMENFI-TALNAQWHPECFVCSDCRVPFNEGDFFDHDGVPYCEIHYH------ 318
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
+ S+ CAGC KPI + + ++R +H + C C L+ F + G
Sbjct: 319 ------AVRGSL---CAGCNKPITGR-CITAMQRKFHPEHFVCDYCLKQLNKGTFKEQNG 368
Query: 123 KLFCRN 128
K +C +
Sbjct: 369 KAYCHS 374
>gi|281342386|gb|EFB17970.1| hypothetical protein PANDA_008333 [Ailuropoda melanoleuca]
Length = 340
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 4 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 63
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 64 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 109
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 110 EFALREDGLFCRAD 123
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 4 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 63
>gi|18858905|ref|NP_571037.1| insulin gene enhancer protein isl-1 [Danio rerio]
gi|1708559|sp|P53405.1|ISL1_DANRE RecName: Full=Insulin gene enhancer protein isl-1; Short=Islet-1
gi|497898|dbj|BAA04670.1| insulin gene enhancer binding protein [Danio rerio]
gi|38173895|gb|AAH60892.1| Isl1 protein [Danio rerio]
Length = 349
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|348507823|ref|XP_003441455.1| PREDICTED: paxillin-like [Oreochromis niloticus]
Length = 529
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + RTWH + C C + S F R+G +C D+ SP
Sbjct: 296 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGHPYCEKDYHNLFSP- 353
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L++TWH D C C + F +
Sbjct: 354 ----------------RCHYCNGPILDK-VVTALDKTWHPDHFFCAQCGAFFGPEGFHEK 396
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 397 DGKAYCRKDYF 407
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 59/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH D C C + F ++GK +CR D+F F
Sbjct: 355 CHYCNGPILDK-VVTALDKTWHPDHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 410
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 411 APKCG------------GCARAILENY-ISALNSLWHPECFVCRECFTPFINGSFFDHDG 457
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 458 QPYCEAHY 465
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 28/128 (21%), Positives = 52/128 (40%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 414 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFINGSFFDHDGQPYCEAHYHERRGSL 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 473 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 516
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 517 KPYCHPCF 524
>gi|328723694|ref|XP_001946328.2| PREDICTED: LIM homeobox transcription factor 1-beta-like
[Acyrthosiphon pisum]
Length = 415
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA CE I D++++ V R++H C++C C L CF KL+CR D+ + R
Sbjct: 39 CAKCECTIADRYIMRVSGRSYHERCLKCTTCSLKLDRSCFVWNAKLYCRQDYDKCVYRSC 98
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREG 122
CG +++ L+ AG E +H C C C L D+ +
Sbjct: 99 GSCGDHIAAGELVMRAG--------------ECVFHEQCFVCVVCGIRLCTGDQYVIKHS 144
Query: 123 KLFCRNDF 130
+LFCR D+
Sbjct: 145 QLFCRPDY 152
>gi|57997583|emb|CAI46024.1| hypothetical protein [Homo sapiens]
Length = 424
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 61/129 (47%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 191 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 244
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
LSS C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 245 -------LSSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 293
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 294 KAYCRKDYF 302
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 250 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 302
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 303 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 352
Query: 123 KLFCR 127
+ +C
Sbjct: 353 QPYCE 357
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 309 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 367
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 368 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 411
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 412 KPYCQNCFL 420
>gi|395510266|ref|XP_003759400.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2
[Sarcophilus harrisii]
Length = 354
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|94400881|ref|NP_059035.3| insulin gene enhancer protein ISL-1 [Rattus norvegicus]
gi|115387114|ref|NP_002193.2| insulin gene enhancer protein ISL-1 [Homo sapiens]
gi|149642655|ref|NP_001092600.1| insulin gene enhancer protein ISL-1 [Bos taurus]
gi|162287065|ref|NP_067434.3| insulin gene enhancer protein ISL-1 [Mus musculus]
gi|291395329|ref|XP_002714072.1| PREDICTED: islet-1 [Oryctolagus cuniculus]
gi|311273676|ref|XP_003133982.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Sus scrofa]
gi|332254884|ref|XP_003276562.1| PREDICTED: insulin gene enhancer protein ISL-1 [Nomascus
leucogenys]
gi|332821395|ref|XP_001150633.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 2 [Pan
troglodytes]
gi|344272509|ref|XP_003408074.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Loxodonta
africana]
gi|345799577|ref|XP_853721.2| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1 [Canis
lupus familiaris]
gi|348568904|ref|XP_003470238.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cavia
porcellus]
gi|354472426|ref|XP_003498440.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Cricetulus
griseus]
gi|395818859|ref|XP_003782831.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Otolemur
garnettii]
gi|397514229|ref|XP_003827396.1| PREDICTED: insulin gene enhancer protein ISL-1 [Pan paniscus]
gi|402871509|ref|XP_003899703.1| PREDICTED: insulin gene enhancer protein ISL-1 [Papio anubis]
gi|403267625|ref|XP_003925922.1| PREDICTED: insulin gene enhancer protein ISL-1 [Saimiri boliviensis
boliviensis]
gi|410949527|ref|XP_003981473.1| PREDICTED: insulin gene enhancer protein ISL-1 [Felis catus]
gi|47606422|sp|P61374.1|ISL1_RAT RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606423|sp|P61371.1|ISL1_HUMAN RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606424|sp|P61372.1|ISL1_MOUSE RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|47606425|sp|P61373.1|ISL1_MESAU RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|2137056|pir||I67418 transcription factor isl-1 - hamster
gi|4261764|gb|AAD14064.1|S70721_1 homeobox [Homo sapiens]
gi|545787|gb|AAB30128.1| homeobox [Rattus sp.]
gi|4469284|emb|CAB38446.1| Lim-homeodomain protein Islet1 [Mus musculus]
gi|22658390|gb|AAH31213.1| ISL LIM homeobox 1 [Homo sapiens]
gi|30065750|gb|AAP20776.1| Isl-1 [Cricetulus sp.]
gi|119575256|gb|EAW54861.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [Homo
sapiens]
gi|123996141|gb|ABM85672.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
gi|124298178|gb|AAI32264.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|124375804|gb|AAI32610.1| ISL1 transcription factor, LIM/homeodomain [Mus musculus]
gi|148686421|gb|EDL18368.1| ISL1 transcription factor, LIM/homeodomain, isoform CRA_b [Mus
musculus]
gi|148877422|gb|AAI46164.1| ISL1 protein [Bos taurus]
gi|149059388|gb|EDM10395.1| ISL1 transcription factor, LIM/homeodomain 1 [Rattus norvegicus]
gi|157928248|gb|ABW03420.1| ISL LIM homeobox 1 [synthetic construct]
gi|261861196|dbj|BAI47120.1| ISL LIM homeobox 1 [synthetic construct]
gi|296475787|tpg|DAA17902.1| TPA: islet-1 [Bos taurus]
gi|351712707|gb|EHB15626.1| Insulin gene enhancer protein ISL-1 [Heterocephalus glaber]
gi|355691298|gb|EHH26483.1| Insulin gene enhancer protein ISL-1 [Macaca mulatta]
gi|226841|prf||1608207A insulin gene enhancer binding protein Isl-1
Length = 349
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|196000228|ref|XP_002109982.1| hypothetical protein TRIADDRAFT_14836 [Trichoplax adhaerens]
gi|190588106|gb|EDV28148.1| hypothetical protein TRIADDRAFT_14836, partial [Trichoplax
adhaerens]
Length = 215
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 66/133 (49%), Gaps = 21/133 (15%)
Query: 5 CAGCEKPILDKFLLNV--LERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFRSP 60
CAGC + I+D+ L + ++ WH C+RCYDC+ L C+ ++G +FCR D+F
Sbjct: 1 CAGCGRSIMDQEYLGIQKTDKKWHIQCLRCYDCNEPLDKDQSCYVKQGNIFCRTDYFN-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDK-FLLNVLERTWHADCVRCYDCHHTL-SDKCF 118
RF S I C C I K ++ E +H C C+ C+ L + + F
Sbjct: 59 -RFGS-----------IKCPTCNSGISPKEHVMKAREYAYHCSCFICHTCNRLLKTGEEF 106
Query: 119 SREG-KLFCRNDF 130
+ G KL+C+ F
Sbjct: 107 AMRGCKLYCKEHF 119
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 4/57 (7%)
Query: 79 CAGCEKPILDKFLLNV--LERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
CAGC + I+D+ L + ++ WH C+RCYDC+ L C+ ++G +FCR D+F
Sbjct: 1 CAGCGRSIMDQEYLGIQKTDKKWHIQCLRCYDCNEPLDKDQSCYVKQGNIFCRTDYF 57
>gi|341894653|gb|EGT50588.1| CBN-ALP-1 protein [Caenorhabditis brenneri]
Length = 1618
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL-FCRNDFFRSPVRF 63
CA C KPI+ LN L++ WH C C C + F E L +C D+
Sbjct: 1506 CAKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDW------- 1557
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLS-DKCFSR 120
++ C C PI D+++ L +H++C C C+H L + F++
Sbjct: 1558 --------NALFTTKCVSCRYPIEAGDRWV-EALGNAFHSNCFTCARCNHNLEGESFFAK 1608
Query: 121 EGKLFCR 127
G+ FCR
Sbjct: 1609 NGQPFCR 1615
>gi|449477398|ref|XP_002196373.2| PREDICTED: paxillin [Taeniopygia guttata]
Length = 593
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 360 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 417
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 418 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 460
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 461 DGKAYCRKDYF 471
Score = 59.7 bits (143), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 419 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 474
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 475 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 521
Query: 123 KLFC 126
+ +C
Sbjct: 522 QPYC 525
>gi|440908077|gb|ELR58138.1| Insulin enhancer protein ISL-1, partial [Bos grunniens mutus]
Length = 359
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 23 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 82
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 83 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 128
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 129 EFALREDGLFCRAD 142
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 23 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 82
>gi|326667590|ref|XP_002661983.2| PREDICTED: paxillin-like [Danio rerio]
Length = 466
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + RTWH + C C + + F R+G+ +C D+
Sbjct: 233 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDYH------ 285
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L++TWH + C C + F +EG
Sbjct: 286 ---------SLFSPRCYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEG 335
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 336 KAYCRKDYF 344
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F +EGK +CR D+F
Sbjct: 292 CYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYF------ 344
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 345 ---------DMFAPKCGGCARAILENY-ISALNSLWHPECFVCRECFTPFVNGSFFEHEG 394
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 395 QPYCEAHY 402
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/128 (22%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 351 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHERRGSL 409
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 410 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 453
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 454 KPYCQSCF 461
>gi|321473071|gb|EFX84039.1| hypothetical protein DAPPUDRAFT_24627 [Daphnia pulex]
Length = 225
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 58/128 (45%), Gaps = 15/128 (11%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC I D++++ V + +WH DC+ C CH L CF+R G+++CR D+ R
Sbjct: 2 CEGCGLGIADRYVMRVADGSWHEDCLVCCICHAPLVHSCFTRSGRVYCRQDYDRVYGAKC 61
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
CG L L+ AG +H C C+ C L D+ R G
Sbjct: 62 GRCGERLYPHELVMRAGSSL-------------AFHLPCFGCFICGRPLQKGDQFVVRAG 108
Query: 123 KLFCRNDF 130
+L CR+D
Sbjct: 109 QLLCRDDL 116
>gi|426246540|ref|XP_004017051.1| PREDICTED: insulin gene enhancer protein ISL-1 [Ovis aries]
Length = 349
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|533419|gb|AAA81946.1| ISL-1 [Homo sapiens]
Length = 346
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 10 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 69
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 70 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 115
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 116 EFALREDGLFCRAD 129
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 10 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 69
>gi|301768533|ref|XP_002919684.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Ailuropoda
melanoleuca]
Length = 349
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|242023961|ref|XP_002432399.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
gi|212517822|gb|EEB19661.1| LIM/homeobox protein Lhx2, putative [Pediculus humanus corporis]
Length = 383
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 19/129 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS- 59
+CAGC ILD++ L ++R WH+ C++C +C L + CF+R+G ++C+ D++R
Sbjct: 29 TACAGCGGRILDRYYLLAVDRQWHSPCLKCTECKSPLDTELTCFARDGNIYCKEDYYRLF 88
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
++ S C G+S+S L+ + + +H +C C C LS D
Sbjct: 89 AIKRCSRCQTGISASELV--------------MRAKDMVFHINCFTCTSCGIPLSKGDHF 134
Query: 118 FSREGKLFC 126
R G ++C
Sbjct: 135 GMRNGLVYC 143
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 45/70 (64%), Gaps = 5/70 (7%)
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSRE 121
PSG G S+S +CAGC ILD++ L ++R WH+ C++C +C L + CF+R+
Sbjct: 19 PSG---GESASCPTACAGCGGRILDRYYLLAVDRQWHSPCLKCTECKSPLDTELTCFARD 75
Query: 122 GKLFCRNDFF 131
G ++C+ D++
Sbjct: 76 GNIYCKEDYY 85
>gi|126315044|ref|XP_001365199.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Monodelphis
domestica]
gi|395510264|ref|XP_003759399.1| PREDICTED: insulin gene enhancer protein ISL-1 isoform 1
[Sarcophilus harrisii]
Length = 349
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|119618582|gb|EAW98176.1| paxillin, isoform CRA_b [Homo sapiens]
Length = 639
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 406 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 463
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 464 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 506
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 507 DGKAYCRKDYF 517
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 465 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 520
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 521 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 567
Query: 123 KLFC 126
+ +C
Sbjct: 568 QPYC 571
>gi|355749907|gb|EHH54245.1| Insulin gene enhancer protein ISL-1 [Macaca fascicularis]
Length = 349
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|123981310|gb|ABM82484.1| ISL1 transcription factor, LIM/homeodomain, (islet-1) [synthetic
construct]
Length = 349
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDRYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDRYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|443696309|gb|ELT97042.1| hypothetical protein CAPTEDRAFT_167444 [Capitella teleta]
Length = 444
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 32/113 (28%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC + I D++ L +E+ WH C+ C DCH L + C++++G ++C+ D++R R
Sbjct: 99 CAGCGETITDRYYLTTVEQCWHVHCLMCVDCHRPLDTQMTCYAKDGNIYCKEDYYR---R 155
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS 114
F + CA C I + ++ + +H +C C C L+
Sbjct: 156 FA-----------VKQCARCHMSIASHEMVMKARQMVFHLNCFTCCVCMKMLT 197
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC + I D++ L +E+ WH C+ C DCH L + C++++G ++C+ D++
Sbjct: 99 CAGCGETITDRYYLTTVEQCWHVHCLMCVDCHRPLDTQMTCYAKDGNIYCKEDYY 153
>gi|47219735|emb|CAG12657.1| unnamed protein product [Tetraodon nigroviridis]
Length = 410
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 62/128 (48%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C D+ F REG+ +C++
Sbjct: 236 CAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGDEGFHDREGQQYCQH--------- 285
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F EG
Sbjct: 286 ---CFLTLFASR---CQGCSQPILESY-ISALNALWHPQCFVCRECYSPFVNGSFFEHEG 338
Query: 123 KLFCRNDF 130
K C +
Sbjct: 339 KPLCEAHY 346
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 17 LLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRFPSGCGVGLSSSM 75
++ L + WH + C C L ++ F ++G+ +C +D+F +
Sbjct: 188 VVTALGKVWHPEHFVCTQCETELGNRNFFEKDGRPYCESDYF---------------TLF 232
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFF 131
CA C KPIL+K ++ L++ WH +C C C D+ F REG+ +C++ F
Sbjct: 233 SPHCAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGDEGFHDREGQQYCQHCFL 288
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F EGK C + +S
Sbjct: 295 CQGCSQPILESYI-SALNALWHPQCFVCRECYSPFVNGSFFEHEGKPLCEAHYHQSRGSV 353
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C C++PIL + + + +H + C+ C L+ CF +E
Sbjct: 354 ---------------CHDCQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLTKGCFKEQEN 397
Query: 123 KLFC 126
K +C
Sbjct: 398 KPYC 401
>gi|397524952|ref|XP_003832444.1| PREDICTED: paxillin [Pan paniscus]
Length = 589
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 356 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 413
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 414 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 456
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 457 DGKAYCRKDYF 467
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 415 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 471 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 517
Query: 123 KLFC 126
+ +C
Sbjct: 518 QPYC 521
>gi|326919041|ref|XP_003205792.1| PREDICTED: PDZ and LIM domain protein 5-like [Meleagris gallopavo]
Length = 475
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 20/115 (17%)
Query: 17 LLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRFPSGCGVGLSSSM 75
++N L++TWH C C CH+ + + F E G +C D++ L +M
Sbjct: 369 VINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCEMDYY------------ALFGTM 416
Query: 76 LISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCR 127
C GCE PI D+F L L TWH C C C+ +L + FS++ K C+
Sbjct: 417 ---CHGCEFPIEAGDRF-LEALGHTWHDTCFVCSVCNDSLEGQAFFSKKDKPLCK 467
>gi|327262855|ref|XP_003216239.1| PREDICTED: insulin gene enhancer protein ISL-1-like [Anolis
carolinensis]
Length = 349
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|339252354|ref|XP_003371400.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
gi|316968379|gb|EFV52660.1| insulin protein enhancer protein ISL-1 [Trichinella spiralis]
Length = 1751
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 62/133 (46%), Gaps = 23/133 (17%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC ILD+++L V + WHA C++C DC L + CF R+GK +C+ D+ R
Sbjct: 1318 CNGCGHEILDQYILRVSPDLEWHAACLKCVDCRQFLDETCTCFVRDGKPYCKLDYVR--- 1374
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDK--FLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ C+ C + + D+ +++ +H C +C C L D+
Sbjct: 1375 ------------LFGVRCSKCGE-VFDRNDYVMRAKNNLYHISCFKCVVCTRPLLPGDEF 1421
Query: 118 FSREGKLFCRNDF 130
R L+C+ D+
Sbjct: 1422 ALRHIALYCKADY 1434
>gi|426374347|ref|XP_004054036.1| PREDICTED: paxillin isoform 2 [Gorilla gorilla gorilla]
Length = 591
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|45382271|ref|NP_990745.1| insulin gene enhancer protein ISL-1 [Gallus gallus]
gi|1708560|sp|P50211.1|ISL1_CHICK RecName: Full=Insulin gene enhancer protein ISL-1; Short=Islet-1
gi|531179|gb|AAA62171.1| amino acid feature: LIM1, bp 331 .. 483; amino acid feature: LIM2,
bp 517 .. 669; amino acid feature: homeodomain, bp 820
.. 999 [Gallus gallus]
Length = 349
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARAKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|359074802|ref|XP_002694569.2| PREDICTED: paxillin [Bos taurus]
Length = 624
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 391 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 448
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 449 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 491
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 492 DGKAYCRKDYF 502
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 450 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 505
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 506 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVHGSFFEHEG 552
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 553 QPYCEAHY 560
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 509 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSL 567
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 568 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 611
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 612 KPYCQNCFL 620
>gi|354486854|ref|XP_003505592.1| PREDICTED: LIM homeobox transcription factor 1-alpha-like
[Cricetulus griseus]
Length = 382
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|547859|sp|Q04650.1|LMX1A_MESAU RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein LMX1A; Short=LIM/homeobox
protein 1; Short=LMX-1
gi|587461|emb|CAA57163.1| lmx1.1 [Mesocricetus auratus]
Length = 382
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|374079156|gb|AEY80349.1| PXN class LIM protein ML001118a [Mnemiopsis leidyi]
Length = 466
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 60/127 (47%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR---EGKLFCRNDFFRSPV 61
C+ C +PI+D+ + L++TWH DC C C + EGK +C+ D++
Sbjct: 285 CSHCNRPIVDR-CITALQKTWHPDCFVCVHCQEPFTRSGTEYHVFEGKPYCKRDYYE--- 340
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSR 120
F CG GC K I++ ++ L+R WH +C CY+C + + +
Sbjct: 341 MFAPKCG------------GCNKAIVNN-VITALKRQWHVECFVCYECKNRFGAGTYYEH 387
Query: 121 EGKLFCR 127
EGK +C
Sbjct: 388 EGKPYCE 394
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 52/124 (41%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C GC K I++ ++ L+R WH +C CY+C + + + EGK +C + +
Sbjct: 346 CGGCNKAIVNN-VITALKRQWHVECFVCYECKNRFGAGTYYEHEGKPYCELHYHQHRGSL 404
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EG 122
CA C KPI + ++ + +H + C C LS F E
Sbjct: 405 ---------------CAACNKPISGR-VITAMRNKFHPEHFVCAFCITPLSKGTFKEHES 448
Query: 123 KLFC 126
K +C
Sbjct: 449 KPYC 452
>gi|344294427|ref|XP_003418919.1| PREDICTED: LOW QUALITY PROTEIN: transforming growth factor
beta-1-induced transcript 1 protein-like [Loxodonta
africana]
Length = 450
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 276 CGLCNQPIQHK-MVTALGTHWHPEHFCCVSCREPFGDEGFHEREGRPYCRRDFLQ----- 329
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 330 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 378
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 379 RPLCENHF 386
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 335 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 387
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 388 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 437
Query: 123 KLFCR 127
K +C+
Sbjct: 438 KPYCQ 442
>gi|17298670|ref|NP_387501.1| LIM homeobox transcription factor 1-alpha [Mus musculus]
gi|27923804|sp|Q9JKU8.1|LMX1A_MOUSE RecName: Full=LIM homeobox transcription factor 1-alpha; AltName:
Full=LIM/homeobox protein 1.1; Short=LMX-1.1; AltName:
Full=LIM/homeobox protein LMX1A
gi|7230571|gb|AAF43012.1|AF226662_1 lim homeodomain-containing transcription factor [Mus musculus]
gi|26336939|dbj|BAC32153.1| unnamed protein product [Mus musculus]
gi|80477081|gb|AAI09168.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
gi|80478204|gb|AAI09169.1| LIM homeobox transcription factor 1 alpha [Mus musculus]
Length = 382
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|209737368|gb|ACI69553.1| Insulin gene enhancer protein isl-1 [Salmo salar]
Length = 356
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYV 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYV 72
>gi|345319636|ref|XP_003430178.1| PREDICTED: LOW QUALITY PROTEIN: paxillin-like, partial
[Ornithorhynchus anatinus]
Length = 578
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 61/132 (46%), Gaps = 23/132 (17%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SP 60
S C+KPI D+ ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 344 SAGXCKKPIADQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP 402
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
C C PILDK ++ L+RTWH + C C + F
Sbjct: 403 -----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHE 444
Query: 120 REGKLFCRNDFF 131
++GK +CR D+F
Sbjct: 445 KDGKAYCRKDYF 456
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 404 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 459
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F G
Sbjct: 460 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHAG 506
Query: 123 KLFC 126
+ +C
Sbjct: 507 QPYC 510
>gi|301780216|ref|XP_002925525.1| PREDICTED: insulin gene enhancer protein ISL-2-like [Ailuropoda
melanoleuca]
Length = 540
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/112 (32%), Positives = 53/112 (47%), Gaps = 17/112 (15%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
+ C VG SSS L+ + + +H +C RC C L
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQL 124
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|158187529|ref|NP_001099437.2| LIM homeobox transcription factor 1 alpha [Rattus norvegicus]
Length = 382
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ + +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHYEK------ 88
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 89 ---------LFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>gi|158299279|ref|XP_319393.4| AGAP010209-PA [Anopheles gambiae str. PEST]
gi|157014289|gb|EAA13793.5| AGAP010209-PA [Anopheles gambiae str. PEST]
Length = 451
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 56 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRLFG 115
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
CG S + F++ + +H +C RC C L D+
Sbjct: 116 TKCDKCGSSFSK--------------NDFVMRAKTKIYHIECFRCSACARQLIPGDEFAL 161
Query: 120 RE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 162 RDGGSLYCKED 172
Score = 49.3 bits (116), Expect = 4e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 56 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 110
>gi|224090443|ref|XP_002197098.1| PREDICTED: insulin gene enhancer protein ISL-1 [Taeniopygia
guttata]
Length = 349
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARAKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|50253600|gb|AAT72002.1| isl1, partial [Xenopus (Silurana) tropicalis]
Length = 268
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYI 72
>gi|58865866|ref|NP_001012147.1| paxillin [Rattus norvegicus]
gi|81890513|sp|Q66H76.1|PAXI_RAT RecName: Full=Paxillin
gi|51858909|gb|AAH81984.1| Paxillin [Rattus norvegicus]
Length = 586
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 353 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 404
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 405 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 455
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 456 KAYCRKDYF 464
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 412 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 467
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 468 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 514
Query: 123 KLFC 126
+ +C
Sbjct: 515 QPYC 518
>gi|307166312|gb|EFN60494.1| LIM/homeobox protein Lhx9 [Camponotus floridanus]
Length = 487
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 6 AGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR-SPVR 62
GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D++R V
Sbjct: 138 GGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYYRLFAVS 197
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
S C G+S+S L+ + + +H C C C L+ D R
Sbjct: 198 RCSRCRAGISASELV--------------MRARDLVYHVACFTCASCGTPLNKGDHFGQR 243
Query: 121 EGKLFCR 127
G ++CR
Sbjct: 244 NGLVYCR 250
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 80 AGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
GC + I +++ L +R WH C+RC C L+ + CF+R+G ++C+ D++
Sbjct: 138 GGCGREIAERWYLRAADRAWHCGCLRCCHCRVPLAAELTCFARDGNIYCKEDYY 191
>gi|195475694|ref|XP_002090119.1| GE19443 [Drosophila yakuba]
gi|194176220|gb|EDW89831.1| GE19443 [Drosophila yakuba]
Length = 469
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
P P + L C+GC + I D+F L+ +E+ WHA C++CY C L C
Sbjct: 129 PPSSPESTNDSKITRSLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSC 188
Query: 118 FSREGKLFCRNDFF 131
+SR+G ++C+ND++
Sbjct: 189 YSRDGNIYCKNDYY 202
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>gi|62751505|ref|NP_001015822.1| LIM domain transcription factor LMO4.1 [Xenopus (Silurana)
tropicalis]
gi|82194932|sp|Q5FVB2.1|LMO41_XENTR RecName: Full=LIM domain transcription factor LMO4.1; AltName:
Full=LIM domain only protein 4.1; Short=LMO-4.1
gi|58475879|gb|AAH90104.1| LIM domain only 4 [Xenopus (Silurana) tropicalis]
Length = 167
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
+CAGC I D+FLL +ER WH C++C C L + C+++ G + CRND+ R
Sbjct: 23 ACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR-- 80
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 LFGSSG-----------ACSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGAIFCEHD 141
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
+CAGC I D+FLL +ER WH C++C C L + C+++ G + CRND+
Sbjct: 23 ACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYI 79
>gi|334327409|ref|XP_001375744.2| PREDICTED: paxillin-like [Monodelphis domestica]
Length = 855
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 622 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 679
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 680 ----------------RCHYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 722
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 723 DGKAYCRKDYF 733
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 56/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 681 CHYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 736
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C C + F +G
Sbjct: 737 APKCG------------GCARAILENY-ISALNTLWHPECFVCRVCFTPFVNGSFFEHDG 783
Query: 123 KLFC 126
+ +C
Sbjct: 784 QPYC 787
>gi|348542626|ref|XP_003458785.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like [Oreochromis niloticus]
Length = 464
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVR 62
+C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C D+F
Sbjct: 230 NCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCEPDYF----- 283
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
+ CA C KPIL+K ++ L++ WH +C C C ++ F RE
Sbjct: 284 ----------TLFSPHCAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHDRE 332
Query: 122 GKLFCRNDFF 131
G+ +C+ F
Sbjct: 333 GQQYCQQCFL 342
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPIL+K ++ L++ WH +C C C ++ F REG+ +C+
Sbjct: 290 CAHCNKPILNK-MVTALDKNWHPECFCCVKCSRAFGEEGFHDREGQQYCQQ--------- 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C + L +S C GC +PIL+ + ++ L WH C C +C+ + F EG
Sbjct: 340 ---CFLTLFASR---CQGCSQPILENY-ISALNSLWHPQCFVCRECYSPFVNGSFFEHEG 392
Query: 123 KLFCRNDF 130
K C +
Sbjct: 393 KPLCEAHY 400
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/124 (28%), Positives = 55/124 (44%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH C C +C+ + F EGK C + +S
Sbjct: 349 CQGCSQPILENYI-SALNSLWHPQCFVCRECYSPFVNGSFFEHEGKPLCEAHYHQS---- 403
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
SM C C++PIL + + + +H + C+ C LS CF +E
Sbjct: 404 --------RGSM---CQACQQPILGR-CVTAMGAKFHPHHLVCHFCLKPLSKGCFKEQEN 451
Query: 123 KLFC 126
K +C
Sbjct: 452 KPYC 455
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+ +S +C+ C+KP++ + ++ L + WH + C +C L + F ++G+ +C
Sbjct: 222 GVQTSSKGNCSACQKPVVGQ-VVTALGKVWHPEHFVCTECETELGSRNFFEKDGRPYCEP 280
Query: 129 DFF 131
D+F
Sbjct: 281 DYF 283
>gi|195114382|ref|XP_002001746.1| GI17017 [Drosophila mojavensis]
gi|193912321|gb|EDW11188.1| GI17017 [Drosophila mojavensis]
Length = 533
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 59 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 118
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 119 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 164
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 165 FALRDAGALYCKED 178
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 59 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 116
>gi|307204532|gb|EFN83212.1| LIM homeobox transcription factor 1 beta [Harpegnathos saltator]
Length = 402
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I DK+++ V ER +H +C+ C C LS CF R+ KL+CR+D+ +
Sbjct: 59 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRSDYEK------ 112
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSRE 121
+ CA C EK ++ V +H +C C C L R+
Sbjct: 113 ---------IFGVKCARCMEKISCSDLVMRVASLVFHVECFMCCMCGQPLPRGAHFILRQ 163
Query: 122 GKLFCRNDF 130
G+ CR DF
Sbjct: 164 GQPICRRDF 172
>gi|195433046|ref|XP_002064526.1| GK23894 [Drosophila willistoni]
gi|194160611|gb|EDW75512.1| GK23894 [Drosophila willistoni]
Length = 539
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 49 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 108
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 109 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 154
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 155 FALRDAGALYCKED 168
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 49 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 106
>gi|332840556|ref|XP_001159942.2| PREDICTED: paxillin isoform 3 [Pan troglodytes]
gi|410211172|gb|JAA02805.1| paxillin [Pan troglodytes]
gi|410262738|gb|JAA19335.1| paxillin [Pan troglodytes]
gi|410305312|gb|JAA31256.1| paxillin [Pan troglodytes]
Length = 591
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|193575711|ref|XP_001949543.1| PREDICTED: LIM/homeobox protein Lhx2-like [Acyrthosiphon pisum]
Length = 356
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 65/131 (49%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC + I D+F L+ ++ WH C++C +C L + C+SR G ++C+ D++R
Sbjct: 23 CAGCGRSIDDRFYLSAVDMCWHIGCLQCAECKLPLDTELTCYSRHGNIYCKQDYYR---- 78
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
L S + CA C+ I ++ + +H +C CY C L D
Sbjct: 79 --------LFS--IKRCARCQGGIGACDLVMRAKDLVYHVECFACYACGAVLCKGDYYGV 128
Query: 120 REGKLFCRNDF 130
R+G +FCR D+
Sbjct: 129 RDGAVFCRPDY 139
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC + I D+F L+ ++ WH C++C +C L + C+SR G ++C+ D++
Sbjct: 23 CAGCGRSIDDRFYLSAVDMCWHIGCLQCAECKLPLDTELTCYSRHGNIYCKQDYY 77
>gi|432858776|ref|XP_004068933.1| PREDICTED: paxillin-like [Oryzias latipes]
Length = 521
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + RTWH + C C + + F R+G+ +C D+
Sbjct: 288 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L++TWH + C C + F ++G
Sbjct: 341 ---------SLFSPRCHYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKDG 390
Query: 123 KLFCRNDFF 131
K FCR D+F
Sbjct: 391 KAFCRKDYF 399
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F ++GK FCR D+F
Sbjct: 347 CHYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKDGKAFCRKDYF------ 399
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 400 ---------DMFAPKCGGCARAILENY-ISALNSLWHPECFVCRECFTPFINGSFFDHDG 449
Query: 123 KLFCRNDF 130
+ +C + +
Sbjct: 450 QPYCESHY 457
Score = 36.6 bits (83), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 53/126 (42%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C + +
Sbjct: 406 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFINGSFFDHDGQPYCESHYHERRGSL 464
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 465 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 508
Query: 123 KLFCRN 128
K +C +
Sbjct: 509 KPYCHS 514
>gi|160420135|ref|NP_001104188.1| ISL LIM homeobox 1 [Xenopus laevis]
gi|115528275|gb|AAI24895.1| LOC100126604 protein [Xenopus laevis]
gi|144952770|gb|ABP04039.1| islet-1 [Xenopus laevis]
gi|213626865|gb|AAI70282.1| Islet-1 [Xenopus laevis]
Length = 354
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYI 72
>gi|345304657|ref|XP_001508080.2| PREDICTED: insulin gene enhancer protein ISL-1-like
[Ornithorhynchus anatinus]
Length = 382
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 46 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 105
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 106 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 151
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 152 EFALREDGLFCRAD 165
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 46 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 105
>gi|242009361|ref|XP_002425456.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
gi|212509292|gb|EEB12718.1| LIM/homeobox protein Lhx9, putative [Pediculus humanus corporis]
Length = 433
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +CH L + CF R+GK +C+ D+ R
Sbjct: 11 CVGCGAQIHDQYILRVAPDLEWHAACLKCAECHQFLDENCTCFVRDGKTYCKRDYVRLFG 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
CG S + F++ + +H DC RC C L D+
Sbjct: 71 TKCDKCGQSFSK--------------NDFVMRAKTKIYHVDCFRCTACERQLVPGDEFAL 116
Query: 120 REGKLFCRND 129
RE LFC+ D
Sbjct: 117 REDGLFCKED 126
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C +CH L + C F R+GK +C+ D+
Sbjct: 11 CVGCGAQIHDQYILRVAPDLEWHAACLKCAECHQFLDENCTCFVRDGKTYCKRDY 65
>gi|21281693|ref|NP_035353.1| paxillin isoform alpha [Mus musculus]
gi|18461377|gb|AAL71909.1|AF293882_1 paxillin alpha [Mus musculus]
gi|74191145|dbj|BAE39404.1| unnamed protein product [Mus musculus]
gi|74211631|dbj|BAE29176.1| unnamed protein product [Mus musculus]
gi|148687908|gb|EDL19855.1| paxillin, isoform CRA_b [Mus musculus]
Length = 557
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 375
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 376 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 426
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 427 KAYCRKDYF 435
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|195443088|ref|XP_002069271.1| GK21109 [Drosophila willistoni]
gi|194165356|gb|EDW80257.1| GK21109 [Drosophila willistoni]
Length = 236
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 59/121 (48%), Gaps = 18/121 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRC-YDCHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL++ + + E +WH C C C L+++ F R+GK++C+ D+
Sbjct: 65 TCAGCKKPILERTICAMGE-SWHEKCFCCDGACRKPLANQPFYERQGKVYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI + + WH DC RC C ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITTDSAVVAMNAKWHRDCFRCNRCESPITTQTFTVD 168
Query: 122 G 122
G
Sbjct: 169 G 169
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 66/131 (50%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
+ C C + ++ K ++ L +TWH + C C + D F+ ++G+ C
Sbjct: 5 VVCYKCNE-VITKRMITALGKTWHPEHFLCRHCESQIEDATFNIQDGEPVC--------- 54
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRC-YDCHHTLSDKCF-S 119
S C V + +CAGC+KPIL++ + + E +WH C C C L+++ F
Sbjct: 55 ---SKCFVERYTQ---TCAGCKKPILERTICAMGE-SWHEKCFCCDGACRKPLANQPFYE 107
Query: 120 REGKLFCRNDF 130
R+GK++C+ D+
Sbjct: 108 RQGKVYCKQDY 118
>gi|170932514|ref|NP_001074324.1| paxillin isoform 2 [Homo sapiens]
gi|317373486|sp|P49023.3|PAXI_HUMAN RecName: Full=Paxillin
gi|119618585|gb|EAW98179.1| paxillin, isoform CRA_e [Homo sapiens]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|1912055|dbj|BAA18997.1| paxillin beta [Homo sapiens]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|219521560|gb|AAI44411.1| Paxillin [Homo sapiens]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|194864184|ref|XP_001970812.1| ap [Drosophila erecta]
gi|190662679|gb|EDV59871.1| ap [Drosophila erecta]
Length = 469
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
P P + L C+GC + I D+F L+ +E+ WHA C++CY C L C
Sbjct: 129 PPSSPESTNDSKITRNLDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSC 188
Query: 118 FSREGKLFCRNDFF 131
+SR+G ++C+ND++
Sbjct: 189 YSRDGNIYCKNDYY 202
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>gi|24585889|ref|NP_724428.1| apterous, isoform A [Drosophila melanogaster]
gi|195580840|ref|XP_002080242.1| GD10352 [Drosophila simulans]
gi|231559|sp|P29673.1|APTE_DROME RecName: Full=Protein apterous
gi|7601|emb|CAA46276.1| developmental regulatory protein [Drosophila melanogaster]
gi|157822|gb|AAA28673.1| LIM-homeodomain apterous protein [Drosophila melanogaster]
gi|7302219|gb|AAF57314.1| apterous, isoform A [Drosophila melanogaster]
gi|28912908|gb|AAO61758.1| HL02012p [Drosophila melanogaster]
gi|194192251|gb|EDX05827.1| GD10352 [Drosophila simulans]
gi|220942502|gb|ACL83794.1| ap-PA [synthetic construct]
gi|220952712|gb|ACL88899.1| ap-PA [synthetic construct]
Length = 469
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>gi|1912057|dbj|BAA18998.1| paxillin gamma [Homo sapiens]
Length = 605
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 372 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 429
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 430 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 472
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 473 DGKAYCRKDYF 483
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 431 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 486
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 487 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 533
Query: 123 KLFC 126
+ +C
Sbjct: 534 QPYC 537
>gi|344217711|ref|NP_001230685.1| paxillin isoform 3 [Homo sapiens]
gi|2935617|gb|AAC05175.1| cytoskeletal protein [Homo sapiens]
gi|119618581|gb|EAW98175.1| paxillin, isoform CRA_a [Homo sapiens]
Length = 605
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 372 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 429
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 430 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 472
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 473 DGKAYCRKDYF 483
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 431 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 486
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 487 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 533
Query: 123 KLFC 126
+ +C
Sbjct: 534 QPYC 537
>gi|197097512|ref|NP_001126332.1| paxillin [Pongo abelii]
gi|75061733|sp|Q5R7I1.1|PAXI_PONAB RecName: Full=Paxillin
gi|55731128|emb|CAH92279.1| hypothetical protein [Pongo abelii]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|402887843|ref|XP_003907290.1| PREDICTED: paxillin isoform 2 [Papio anubis]
gi|387540298|gb|AFJ70776.1| paxillin isoform 1 [Macaca mulatta]
Length = 591
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 415
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 416 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 458
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 459 DGKAYCRKDYF 469
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 473 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
>gi|281360182|ref|NP_001163058.1| apterous, isoform C [Drosophila melanogaster]
gi|17862966|gb|AAL39960.1| SD05618p [Drosophila melanogaster]
gi|272432345|gb|ACZ94338.1| apterous, isoform C [Drosophila melanogaster]
Length = 468
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFF 57
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 144 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 201
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 144 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 201
>gi|201066085|gb|ACH92452.1| FI08061p [Drosophila melanogaster]
Length = 198
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + ER WH C C C L+ + F R+GK +C+ D+
Sbjct: 85 TCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYERDGKPYCKQDY----- 138
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+ CA CEKPI D +L + WH +C +C C + ++ + F+ +
Sbjct: 139 ----------ENLFAARCAKCEKPITDSAVL-AMNVKWHRNCFQCNKCENPITSQTFTID 187
Query: 122 G 122
G
Sbjct: 188 G 188
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 25 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL+K + + ER WH C C C L+ + F
Sbjct: 82 -------------YTYTCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYE 127
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 128 RDGKPYCKQDY 138
>gi|195484275|ref|XP_002090625.1| GE12696 [Drosophila yakuba]
gi|194176726|gb|EDW90337.1| GE12696 [Drosophila yakuba]
Length = 540
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|74142816|dbj|BAE42452.1| unnamed protein product [Mus musculus]
Length = 557
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 375
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 376 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 426
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 427 KAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|426381989|ref|XP_004057611.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 1 [Gorilla gorilla gorilla]
gi|426381991|ref|XP_004057612.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 2 [Gorilla gorilla gorilla]
Length = 444
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 432 KPYCQPCFL 440
>gi|158254920|dbj|BAF83431.1| unnamed protein product [Homo sapiens]
Length = 349
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQCLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQCLDESCTCFVRDGKTYCKRDYI 72
>gi|74195162|dbj|BAE28319.1| unnamed protein product [Mus musculus]
Length = 557
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY------- 375
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 376 --------HSLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 426
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 427 KAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|431902904|gb|ELK09113.1| Transforming growth factor beta-1-induced transcript 1 protein
[Pteropus alecto]
Length = 443
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 269 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRQDFLQ----- 322
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 323 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSAGSFFEHEG 371
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 372 RPLCENHF 379
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 328 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSAGSFFEHEGRPLCENHFHERRGSL 386
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 387 ---------------CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRALTKGSFQERAG 430
Query: 123 KLFCR 127
K +C+
Sbjct: 431 KPYCQ 435
>gi|410903283|ref|XP_003965123.1| PREDICTED: LIM domain transcription factor LMO4-B-like [Takifugu
rubripes]
Length = 233
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL---SDKCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH C+RC CH L S C+SR G + C++D+
Sbjct: 22 SCAGCGGRITDRFLLFSMERYWHTRCLRCSCCHAELGEFSRSCYSRGGMILCKDDY---- 77
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+R G +C+ C + I + ++ +H C C C + L D+
Sbjct: 78 IRLFGHTG---------ACSACGQTIPPSEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 128
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 129 HYINGSIFCEHD 140
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL---SDKCFSREGKLFCRNDFF 131
SCAGC I D+FLL +ER WH C+RC CH L S C+SR G + C++D+
Sbjct: 22 SCAGCGGRITDRFLLFSMERYWHTRCLRCSCCHAELGEFSRSCYSRGGMILCKDDYI 78
>gi|45384484|ref|NP_990315.1| paxillin [Gallus gallus]
gi|1352723|sp|P49024.1|PAXI_CHICK RecName: Full=Paxillin
gi|704350|gb|AAC59665.1| paxillin [Gallus gallus]
gi|895923|gb|AAC38018.1| paxillin [Gallus gallus]
Length = 559
Score = 62.4 bits (150), Expect = 5e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 326 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 383
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 384 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEK 426
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 427 DGKAYCRKDYF 437
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 385 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDGKAYCRKDYFD---MF 440
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 441 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 487
Query: 123 KLFC 126
+ +C
Sbjct: 488 QPYC 491
Score = 44.3 bits (103), Expect = 0.018, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 444 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSL 502
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 503 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 546
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 547 KPYCQNCFL 555
>gi|402908232|ref|XP_003916856.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 2 [Papio anubis]
gi|402908234|ref|XP_003916857.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 3 [Papio anubis]
Length = 444
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|327260466|ref|XP_003215055.1| PREDICTED: leupaxin-like [Anolis carolinensis]
Length = 369
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI K ++ L +TWH + C C + S + REGK +C+ D+ + SP
Sbjct: 136 CASCHKPIAGK-VITALGKTWHPEHFLCGHCGKEVGSSPFYEREGKAYCQEDYHQLFSP- 193
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PI +K +L ++RTWH + C C + F +
Sbjct: 194 ----------------RCAYCSAPIQEK-VLTAMDRTWHPEHFFCAHCGKVFGNAGFHEK 236
Query: 121 EGKLFCRNDFF 131
+GK +C+ DF
Sbjct: 237 DGKPYCQKDFL 247
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
CA C PI +K +L ++RTWH + C C + F ++GK +C+ DF SP
Sbjct: 195 CAYCSAPIQEK-VLTAMDRTWHPEHFFCAHCGKVFGNAGFHEKDGKPYCQKDFLALFSP- 252
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSR 120
C GC++P++D++ L+ L WH +C C DC + + F
Sbjct: 253 ----------------KCRGCDRPVMDQY-LSALNAVWHPECFVCGDCFCSFENGSFFEL 295
Query: 121 EGKLFCRNDF 130
G+ FC F
Sbjct: 296 NGRPFCELHF 305
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC++P++D++L + L WH +C C DC + + F G+ FC F
Sbjct: 254 CRGCDRPVMDQYL-SALNAVWHPECFVCGDCFCSFENGSFFELNGRPFCELHFHH----- 307
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
C GC KPI+ + ++ + +H + C C L + F + G
Sbjct: 308 ----------HQGTVCQGCGKPIVGR-CVSAMGYKFHPEHFVCAFCLTQLHNGIFQEQNG 356
Query: 123 KLFC 126
K +C
Sbjct: 357 KTYC 360
>gi|355560570|gb|EHH17256.1| hypothetical protein EGK_13609 [Macaca mulatta]
Length = 634
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 52 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 108
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 109 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 156
Query: 119 SREGKLFC 126
KL+C
Sbjct: 157 VEHSKLYC 164
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC 117
R+P R G S L CA C + I D L L WHADC RC DC +LS +
Sbjct: 35 RAPSRT-LGSAAPAPGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQY 93
Query: 118 FSREGKLFCRNDFF 131
+ ++G+LFC+ D++
Sbjct: 94 YEKDGQLFCKKDYW 107
>gi|355710159|gb|EHH31623.1| hypothetical protein EGK_12726 [Macaca mulatta]
Length = 444
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|348542365|ref|XP_003458655.1| PREDICTED: LIM domain kinase 1-like [Oreochromis niloticus]
Length = 675
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CAGC++ I D+ L L WH C RC +C +LS + ++G+LFC+ D++
Sbjct: 24 LPVCAGCKQRIYDEQYLQALNNDWHTVCFRCCECSASLSHWYYEKDGRLFCKKDYW---A 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
+F C GC PI ++ E+ +H +C C +C + D
Sbjct: 81 KFGE------------LCHGCNDPITTGLIMVAGEQKYHPECFTCLNCRSFIGDGDTYAL 128
Query: 119 SREGKLFC 126
KL+C
Sbjct: 129 VERSKLYC 136
>gi|157118342|ref|XP_001653180.1| lim homeobox protein [Aedes aegypti]
gi|108883303|gb|EAT47528.1| AAEL001380-PA [Aedes aegypti]
Length = 387
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 17/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C C PI D++++ V++ ++H C++C C L CF R+GKL+CR D+ R R
Sbjct: 126 CGQCCSPICDRYIMKVVDISYHERCLQCTSCAIRLMHSCFMRDGKLYCRFDYERLYGRN- 184
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
C GC EK D+ ++ L+ +H C C C L D+ ++
Sbjct: 185 -------------RCLGCGEKIGADELVMRALDNVFHLKCFICVVCGVRLQKGDQYVIKQ 231
Query: 122 GKLFCRNDF 130
+LFCR D+
Sbjct: 232 SQLFCRPDY 240
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL 124
S G S+ C C PI D++++ V++ ++H C++C C L CF R+GKL
Sbjct: 112 SSATTGGSAGNTTLCGQCCSPICDRYIMKVVDISYHERCLQCTSCAIRLMHSCFMRDGKL 171
Query: 125 FCRNDF 130
+CR D+
Sbjct: 172 YCRFDY 177
>gi|21361591|ref|NP_057011.2| transforming growth factor beta-1-induced transcript 1 protein
isoform 2 [Homo sapiens]
gi|257900476|ref|NP_001158191.1| transforming growth factor beta-1-induced transcript 1 protein
isoform 2 [Homo sapiens]
gi|114662184|ref|XP_523355.2| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 3 [Pan troglodytes]
gi|332845769|ref|XP_003315116.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Pan troglodytes]
gi|12804779|gb|AAH01830.1| Transforming growth factor beta 1 induced transcript 1 [Homo
sapiens]
gi|13676309|gb|AAH01507.2| Transforming growth factor beta 1 induced transcript 1 [Homo
sapiens]
gi|16878166|gb|AAH17288.1| Transforming growth factor beta 1 induced transcript 1 [Homo
sapiens]
gi|21619705|gb|AAH32545.1| Transforming growth factor beta 1 induced transcript 1 [Homo
sapiens]
gi|83026501|gb|ABB96286.1| transforming growth factor beta 1 induced transcript 1 [Homo
sapiens]
gi|119572511|gb|EAW52126.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Homo sapiens]
gi|119572513|gb|EAW52128.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Homo sapiens]
gi|119572515|gb|EAW52130.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Homo sapiens]
gi|189053867|dbj|BAG36132.1| unnamed protein product [Homo sapiens]
Length = 444
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|119618583|gb|EAW98177.1| paxillin, isoform CRA_c [Homo sapiens]
Length = 558
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 325 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 382
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 383 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 425
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 426 DGKAYCRKDYF 436
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 384 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 439
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 440 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 486
Query: 123 KLFC 126
+ +C
Sbjct: 487 QPYC 490
>gi|194879942|ref|XP_001974333.1| GG21675 [Drosophila erecta]
gi|190657520|gb|EDV54733.1| GG21675 [Drosophila erecta]
Length = 534
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 50.1 bits (118), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|30585037|gb|AAP36791.1| Homo sapiens transforming growth factor beta 1 induced transcript 1
[synthetic construct]
gi|60653039|gb|AAX29214.1| transforming growth factor beta 1 induced transcript 1 [synthetic
construct]
gi|60653041|gb|AAX29215.1| transforming growth factor beta 1 induced transcript 1 [synthetic
construct]
Length = 445
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 432 KPYCQPCFL 440
>gi|1432164|gb|AAB17545.1| LIM-kinase1 [Homo sapiens]
gi|1657755|gb|AAC13885.1| LIM-kinase [Homo sapiens]
Length = 647
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|148687907|gb|EDL19854.1| paxillin, isoform CRA_a [Mus musculus]
Length = 458
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 225 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 277
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 278 ---------SLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 327
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 328 KAYCRKDYF 336
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 284 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 336
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 337 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 386
Query: 123 KLFCR 127
+ +C
Sbjct: 387 QPYCE 391
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 343 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 401
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 402 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 445
Query: 123 KLFCRN 128
K +C++
Sbjct: 446 KPYCQS 451
>gi|426374345|ref|XP_004054035.1| PREDICTED: paxillin isoform 1 [Gorilla gorilla gorilla]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|397472004|ref|XP_003807552.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 2 [Pan paniscus]
gi|397472006|ref|XP_003807553.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 3 [Pan paniscus]
Length = 444
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 432 KPYCQPCFL 440
>gi|332840554|ref|XP_509424.3| PREDICTED: paxillin isoform 5 [Pan troglodytes]
gi|410211170|gb|JAA02804.1| paxillin [Pan troglodytes]
gi|410262736|gb|JAA19334.1| paxillin [Pan troglodytes]
gi|410305310|gb|JAA31255.1| paxillin [Pan troglodytes]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|308473042|ref|XP_003098747.1| CRE-ALP-1 protein [Caenorhabditis remanei]
gi|308268181|gb|EFP12134.1| CRE-ALP-1 protein [Caenorhabditis remanei]
Length = 1271
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 36/127 (28%), Positives = 55/127 (43%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL-FCRNDFFRSPVRF 63
CA C KPI+ LN L++ WH C C C + F E L +C D+
Sbjct: 1159 CAKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDW------- 1210
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLS-DKCFSR 120
++ C C PI D+++ L +H++C C C+H L + F++
Sbjct: 1211 --------NALFTTKCVSCRYPIEAGDRWV-EALGNAFHSNCFTCARCNHNLEGESFFAK 1261
Query: 121 EGKLFCR 127
G+ FCR
Sbjct: 1262 NGQPFCR 1268
>gi|78369210|ref|NP_001030390.1| transforming growth factor beta-1-induced transcript 1 protein [Bos
taurus]
gi|75773705|gb|AAI04511.1| Transforming growth factor beta 1 induced transcript 1 [Bos taurus]
gi|296473281|tpg|DAA15396.1| TPA: transforming growth factor beta-1-induced transcript 1 protein
[Bos taurus]
Length = 439
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 265 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 318
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 319 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 367
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 368 RPLCENHF 375
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 324 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 376
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 377 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 426
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 427 KPYCQPCFL 435
>gi|326929976|ref|XP_003211129.1| PREDICTED: paxillin-like [Meleagris gallopavo]
Length = 733
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 500 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 557
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 558 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEK 600
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 601 DGKAYCRKDYF 611
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 559 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDGKAYCRKDYFD---MF 614
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 615 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 661
Query: 123 KLFC 126
+ +C
Sbjct: 662 QPYC 665
Score = 43.9 bits (102), Expect = 0.019, Method: Composition-based stats.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 618 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSL 676
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 677 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 720
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 721 KPYCQNCFL 729
>gi|1432165|gb|AAB17546.1| alternatively spliced LIM-kinase1 [Homo sapiens]
gi|1657756|gb|AAC13886.1| LIM-kinase [Homo sapiens]
Length = 633
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 8 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 64
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 65 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 112
Query: 119 SREGKLFC 126
KL+C
Sbjct: 113 VEHSKLYC 120
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 1 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 60
Query: 129 DFF 131
D++
Sbjct: 61 DYW 63
>gi|260793702|ref|XP_002591850.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
gi|229277061|gb|EEN47861.1| hypothetical protein BRAFLDRAFT_125337 [Branchiostoma floridae]
Length = 329
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 55/114 (48%), Gaps = 17/114 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL+ L+R WH C++C C L D CFS+ G + C+ D+ R
Sbjct: 65 CAGCGGKIGDRFLLHALDRYWHVACLKCSCCQAQLGDIGSSCFSKAGMILCKTDYIRL-- 122
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS 114
G S +C C + I ++F++ +H C C+ C + LS
Sbjct: 123 -------FGASG----ACNACGQSIPANEFVMRTQGNVYHVKCFTCFTCRYQLS 165
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Query: 58 RSPVRFPS--GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
+ P PS G G + + CAGC I D+FLL+ L+R WH C++C C L D
Sbjct: 42 QRPGVVPSRGGGGPMTDNGSVKKCAGCGGKIGDRFLLHALDRYWHVACLKCSCCQAQLGD 101
Query: 116 ---KCFSREGKLFCRNDFF 131
CFS+ G + C+ D+
Sbjct: 102 IGSSCFSKAGMILCKTDYI 120
>gi|307166315|gb|EFN60497.1| Protein apterous [Camponotus floridanus]
Length = 506
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 2/58 (3%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++R
Sbjct: 181 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEITCFSRDGNIYCKKDYYR 238
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 2/57 (3%)
Query: 77 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
+ CAGC I D+F L ++R WHA C++C C L + CFSR+G ++C+ D++
Sbjct: 181 VVCAGCGLRISDRFYLQAVDRRWHAACLQCSHCRQGLDGEITCFSRDGNIYCKKDYY 237
>gi|194218987|ref|XP_001915399.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Equus caballus]
Length = 443
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 269 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 322
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 323 ----------LFAPRCQGCQSPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 371
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 372 RPLCENHF 379
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 328 CQGCQSPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 380
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 381 ------ARRGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 430
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 431 KPYCQPCFL 439
>gi|395756360|ref|XP_003780113.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Pongo abelii]
Length = 444
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|158261347|dbj|BAF82851.1| unnamed protein product [Homo sapiens]
Length = 647
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|402887841|ref|XP_003907289.1| PREDICTED: paxillin isoform 1 [Papio anubis]
gi|380788197|gb|AFE65974.1| paxillin isoform 1 [Macaca mulatta]
gi|383408365|gb|AFH27396.1| paxillin isoform 2 [Macaca mulatta]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|170932516|ref|NP_002850.2| paxillin isoform 1 [Homo sapiens]
gi|119618584|gb|EAW98178.1| paxillin, isoform CRA_d [Homo sapiens]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|4505001|ref|NP_002305.1| LIM domain kinase 1 isoform 1 [Homo sapiens]
gi|332866745|ref|XP_001148746.2| PREDICTED: LIM domain kinase 1 isoform 1 [Pan troglodytes]
gi|90185240|sp|P53667.3|LIMK1_HUMAN RecName: Full=LIM domain kinase 1; Short=LIMK-1
gi|565280|dbj|BAA05371.1| LIM kinase [Homo sapiens]
gi|119590026|gb|EAW69620.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|119590029|gb|EAW69623.1| LIM domain kinase 1, isoform CRA_a [Homo sapiens]
gi|151554981|gb|AAI48341.1| LIM domain kinase 1 [synthetic construct]
gi|157169682|gb|AAI52983.1| LIM domain kinase 1 [synthetic construct]
gi|168279079|dbj|BAG11419.1| LIM domain kinase 1 [synthetic construct]
gi|410223988|gb|JAA09213.1| LIM domain kinase 1 [Pan troglodytes]
gi|410261992|gb|JAA18962.1| LIM domain kinase 1 [Pan troglodytes]
gi|410296294|gb|JAA26747.1| LIM domain kinase 1 [Pan troglodytes]
gi|410339893|gb|JAA38893.1| LIM domain kinase 1 [Pan troglodytes]
Length = 647
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|449281603|gb|EMC88650.1| Paxillin, partial [Columba livia]
Length = 588
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 355 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 412
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 413 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 455
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 456 DGKAYCRKDYF 466
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 414 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 469
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 470 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 516
Query: 123 KLFC 126
+ +C
Sbjct: 517 QPYC 520
>gi|704348|gb|AAC50104.1| paxillin [Homo sapiens]
gi|4099533|gb|AAD00648.1| paxillin [Homo sapiens]
gi|187950445|gb|AAI36788.1| Paxillin [Homo sapiens]
gi|189054360|dbj|BAG36880.1| unnamed protein product [Homo sapiens]
gi|223460550|gb|AAI36795.1| Paxillin [Homo sapiens]
gi|307685417|dbj|BAJ20639.1| paxillin [synthetic construct]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 6e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|77455008|gb|ABA86313.1| CG31624 [Drosophila yakuba]
gi|77455010|gb|ABA86314.1| CG31624 [Drosophila yakuba]
gi|77455012|gb|ABA86315.1| CG31624 [Drosophila erecta]
Length = 166
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL++ + + E +WH C C C L+++ F R+GK +C+ D+
Sbjct: 58 TCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYERDGKAYCKQDY----- 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D ++ + WH DC RC C + ++ + F+ +
Sbjct: 112 ----------EDLFAARCAKCEKPITDSAVI-AMNVKWHRDCFRCNKCENPITSQTFTID 160
Query: 122 G 122
G
Sbjct: 161 G 161
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/124 (26%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 10 KPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCG 68
+ + K ++ L +TWH + C C + D F+ + G+ C F
Sbjct: 4 QEAITKRMITALGKTWHPEHFLCRHCDEQIVDATFNIQSGEPVCNKCFVER--------- 54
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFC 126
+CAGC+KPIL++ + + E +WH C C C L+++ F R+GK +C
Sbjct: 55 ------YTYTCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYERDGKAYC 107
Query: 127 RNDF 130
+ D+
Sbjct: 108 KQDY 111
>gi|344303398|ref|XP_003421464.1| PREDICTED: leupaxin [Loxodonta africana]
Length = 400
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 225 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGTEGFHEKDNKPYCRKDFL---AMF 280
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC T S F +G
Sbjct: 281 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFSTFSTGSFFELDG 327
Query: 123 KLFCR 127
+ FC
Sbjct: 328 RPFCE 332
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L + WH + C C +S F R G +C D+ SP
Sbjct: 166 CASCQKPIAGK-VIHALGQAWHPEHFVCTHCKGEISSSPFFERGGLAYCSKDYHHLFSP- 223
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 224 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGTEGFHEK 266
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 267 DNKPYCRKDFL 277
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC T S F +G+ FC +
Sbjct: 284 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFSTFSTGSFFELDGRPFCELHYHHRRGTL 342
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 343 CRGCGQPIT 351
>gi|256079939|ref|XP_002576241.1| lim homeobox protein [Schistosoma mansoni]
gi|350644840|emb|CCD60434.1| lim homeobox protein,putative [Schistosoma mansoni]
Length = 192
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 34/54 (62%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFR 58
CAGC +PI D +LL + TWH CV C CH L DKC R KL+CRND+ +
Sbjct: 9 CAGCHQPIWDPYLLCIDHNTWHEQCVTCSICHCLLHDKCLVRNEKLYCRNDYIK 62
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 33/53 (62%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC +PI D +LL + TWH CV C CH L DKC R KL+CRND+
Sbjct: 9 CAGCHQPIWDPYLLCIDHNTWHEQCVTCSICHCLLHDKCLVRNEKLYCRNDYI 61
>gi|33304205|gb|AAQ02610.1| LIM domain kinase 1, partial [synthetic construct]
Length = 648
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|348539206|ref|XP_003457080.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Oreochromis niloticus]
Length = 357
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIRLYG 76
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G S + F++ + +H +C RC C L D+
Sbjct: 77 IKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGDEFAL 122
Query: 120 REGKLFCRND 129
RE LFCR D
Sbjct: 123 REDGLFCRAD 132
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYI 72
>gi|380786805|gb|AFE65278.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|383418323|gb|AFH32375.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
gi|384947016|gb|AFI37113.1| LIM domain kinase 1 isoform 1 [Macaca mulatta]
Length = 647
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|355761343|gb|EHH61791.1| hypothetical protein EGM_19877 [Macaca fascicularis]
Length = 677
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 52 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 108
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 109 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 156
Query: 119 SREGKLFC 126
KL+C
Sbjct: 157 VEHSKLYC 164
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC 117
R+P R G S L CA C + I D L L WHADC RC DC +LS +
Sbjct: 35 RAPSRT-LGSAAPAPRSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQY 93
Query: 118 FSREGKLFCRNDFF 131
+ ++G+LFC+ D++
Sbjct: 94 YEKDGQLFCKKDYW 107
>gi|297715415|ref|XP_002834074.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 1 [Pongo abelii]
Length = 461
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|55228663|gb|AAV44217.1| myocardial ischemic preconditioning associated protein 7 [Rattus
norvegicus]
gi|149063552|gb|EDM13875.1| rCG21114, isoform CRA_b [Rattus norvegicus]
Length = 557
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 376
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 377 ---------SLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 426
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 427 KAYCRKDYF 435
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 435
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 436 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFCR 127
+ +C
Sbjct: 486 QPYCE 490
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 442 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 500
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 501 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 544
Query: 123 KLFCRNDFF 131
K +C++ F
Sbjct: 545 KPYCQSCFL 553
>gi|380030211|ref|XP_003698747.1| PREDICTED: LOW QUALITY PROTEIN: LIM homeobox transcription factor
1-beta-like [Apis florea]
Length = 402
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+DK+++ V R +H +C+ C C L CF RE KL+CR D+ R
Sbjct: 58 CAGCGRTIVDKYVMQVAGRNYHEECLSCAACATPLIHSCFIRELKLYCRTDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS--RE 121
+ CA C EK F+L +H +C C C L R+
Sbjct: 112 ---------IFGVKCARCMEKISCSDFVLRTPGSVFHVECFACCMCGQPLPPGAHYXLRQ 162
Query: 122 GKLFCRNDF 130
G+ CR D+
Sbjct: 163 GQPICRRDY 171
>gi|195386470|ref|XP_002051927.1| GJ24442 [Drosophila virilis]
gi|194148384|gb|EDW64082.1| GJ24442 [Drosophila virilis]
Length = 529
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|440913325|gb|ELR62789.1| Transforming growth factor beta-1-induced transcript 1 protein,
partial [Bos grunniens mutus]
Length = 452
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 278 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 331
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 332 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 380
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 381 RPLCENHF 388
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 337 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 389
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 390 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 439
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 440 KPYCQPCFL 448
>gi|426356555|ref|XP_004045628.1| PREDICTED: LIM domain kinase 1 [Gorilla gorilla gorilla]
Length = 633
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 52 LPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 108
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 109 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 156
Query: 119 SREGKLFC 126
KL+C
Sbjct: 157 VEHSKLYC 164
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 61 VRFPS---GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC 117
R PS G S L CA C + I D L L WHADC RC DC +LS +
Sbjct: 34 TRAPSRTLGRAAPAPGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQY 93
Query: 118 FSREGKLFCRNDFF 131
+ ++G+LFC+ D++
Sbjct: 94 YEKDGQLFCKKDYW 107
>gi|371573882|gb|AEX38311.1| islet [Mnemiopsis leidyi]
Length = 321
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 56/115 (48%), Gaps = 24/115 (20%)
Query: 5 CAGCEKPILDKFLLNVLER-TWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
CAGC PI D+F+L V WHA C++C DC+ L + CF REGK +C+ DF V
Sbjct: 11 CAGCRCPITDQFILRVAPNLEWHASCLKCDDCNKFLDENCTCFIREGKPYCKKDF----V 66
Query: 62 RFPSG---CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
RF + C G SS + F++ V E +H C RC C L
Sbjct: 67 RFGAKCHRCDQGFSS--------------NDFVMRVRENIFHLSCFRCNMCSRQL 107
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVLER-TWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDF 130
CAGC PI D+F+L V WHA C++C DC+ L + CF REGK +C+ DF
Sbjct: 11 CAGCRCPITDQFILRVAPNLEWHASCLKCDDCNKFLDENCTCFIREGKPYCKKDF 65
>gi|198473929|ref|XP_001356494.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
gi|198138172|gb|EAL33558.2| GA10441 [Drosophila pseudoobscura pseudoobscura]
Length = 548
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195147414|ref|XP_002014675.1| GL18825 [Drosophila persimilis]
gi|194106628|gb|EDW28671.1| GL18825 [Drosophila persimilis]
Length = 550
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|410920355|ref|XP_003973649.1| PREDICTED: paxillin-like [Takifugu rubripes]
Length = 521
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI+ + ++ + RTWH + C C + K F R+G+ +C D+ SP
Sbjct: 288 CGACKKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSKNFFERDGQPYCEKDYHNLFSP- 345
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L++TWH + C C + F +
Sbjct: 346 ----------------RCHYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGVEGFHEK 388
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 389 DGKAYCRKDYF 399
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/128 (26%), Positives = 58/128 (45%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F ++GK +CR D+F
Sbjct: 347 CHYCNGPILDK-VVTALDKTWHPEHFFCAQCGSFFGVEGFHEKDGKAYCRKDYF------ 399
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 400 ---------DMFAPKCGGCARAILENY-ISALNSLWHPECFVCRECFTPFINGSFFDHDG 449
Query: 123 KLFCRNDF 130
+ +C + +
Sbjct: 450 QPYCESHY 457
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 27/126 (21%), Positives = 54/126 (42%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C + +
Sbjct: 406 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFINGSFFDHDGQPYCESHYHEQRGSL 464
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 465 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 508
Query: 123 KLFCRN 128
K +C++
Sbjct: 509 KPYCQS 514
>gi|397472002|ref|XP_003807551.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 1 [Pan paniscus]
Length = 461
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|194758653|ref|XP_001961576.1| GF14867 [Drosophila ananassae]
gi|190615273|gb|EDV30797.1| GF14867 [Drosophila ananassae]
Length = 550
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 53 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 112
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 113 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 158
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 159 FALRDAGALYCKED 172
Score = 49.7 bits (117), Expect = 3e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 53 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 110
>gi|388454374|ref|NP_001253101.1| transforming growth factor beta-1-induced transcript 1 protein
[Macaca mulatta]
gi|387542114|gb|AFJ71684.1| transforming growth factor beta-1-induced transcript 1 protein
isoform 1 [Macaca mulatta]
Length = 461
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|73958298|ref|XP_547052.2| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Canis lupus familiaris]
Length = 461
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|2865163|dbj|BAA24799.1| Hic-5 [Homo sapiens]
Length = 460
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 286 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 340 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 388
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 389 RPLCENHF 396
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 345 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 397
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 398 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 447
Query: 123 KLFCR 127
K +C+
Sbjct: 448 KPYCQ 452
>gi|402908230|ref|XP_003916855.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 1 [Papio anubis]
Length = 461
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|403276818|ref|XP_003930080.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 2 [Saimiri boliviensis boliviensis]
Length = 444
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 49.3 bits (116), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 382 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|339251228|ref|XP_003373097.1| putative LIM domain protein [Trichinella spiralis]
gi|316969047|gb|EFV53211.1| putative LIM domain protein [Trichinella spiralis]
Length = 770
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+K I+ + + L + WH + C C L+ + F R G ++C +D+ R SP
Sbjct: 481 CEACKKSIVGQVAI-ALGKMWHEEHFVCAHCGERLAHRNFYERSGSIYCEHDYHRLFSP- 538
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PI +K + L++TWH + C C + ++ F +
Sbjct: 539 ----------------RCAYCNTPIKEK-CITALDQTWHPEHFYCAKCGRPIGEEIFHEK 581
Query: 121 EGKLFCRNDFF 131
+G+ FC D+F
Sbjct: 582 DGRAFCHKDYF 592
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/100 (28%), Positives = 48/100 (48%), Gaps = 18/100 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI +K + L++TWH + C C + ++ F ++G+ FC D+F
Sbjct: 540 CAYCNTPIKEK-CITALDQTWHPEHFYCAKCGRPIGEEIFHEKDGRAFCHKDYF------ 592
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADC 103
++ +C GC++PI + + L WH+DC
Sbjct: 593 ---------TNFTPTCHGCKRPITGHY-ITALNCEWHSDC 622
>gi|109638745|ref|NP_001035919.1| transforming growth factor beta-1-induced transcript 1 protein
isoform 1 [Homo sapiens]
gi|114662180|ref|XP_001159480.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 2 [Pan troglodytes]
gi|150416155|sp|O43294.2|TGFI1_HUMAN RecName: Full=Transforming growth factor beta-1-induced transcript
1 protein; AltName: Full=Androgen receptor coactivator
55 kDa protein; AltName: Full=Androgen
receptor-associated protein of 55 kDa; AltName:
Full=Hydrogen peroxide-inducible clone 5 protein;
Short=Hic-5
gi|119572512|gb|EAW52127.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_b [Homo sapiens]
gi|208967963|dbj|BAG73820.1| transforming growth factor beta 1 induced transcript 1 [synthetic
construct]
gi|410251554|gb|JAA13744.1| transforming growth factor beta 1 induced transcript 1 [Pan
troglodytes]
gi|410343173|gb|JAA40533.1| transforming growth factor beta 1 induced transcript 1 [Pan
troglodytes]
Length = 461
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|195475933|ref|XP_002090237.1| GE12993 [Drosophila yakuba]
gi|194176338|gb|EDW89949.1| GE12993 [Drosophila yakuba]
Length = 178
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL++ + + E +WH C C C L+++ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYERDGKAYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D ++ + WH DC RC C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVI-AMNVKWHRDCFRCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCRHCDEQIVDATFNIQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL++ + + E +WH C C C L+++ F
Sbjct: 62 -------------YTYTCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKAYCKQDY 118
>gi|55728268|emb|CAH90879.1| hypothetical protein [Pongo abelii]
Length = 624
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 56/125 (44%), Gaps = 18/125 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++ R+
Sbjct: 2 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---ARYG 58
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + D
Sbjct: 59 E------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 106
Query: 122 GKLFC 126
KL+C
Sbjct: 107 SKLYC 111
>gi|149063551|gb|EDM13874.1| rCG21114, isoform CRA_a [Rattus norvegicus]
Length = 458
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 225 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 277
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 278 ---------SLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 327
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 328 KAYCRKDYF 336
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 284 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 336
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 337 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 386
Query: 123 KLFCR 127
+ +C
Sbjct: 387 QPYCE 391
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 343 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 401
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 402 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 445
Query: 123 KLFCRNDFF 131
K +C++ F
Sbjct: 446 KPYCQSCFL 454
>gi|47217571|emb|CAG02498.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1141
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 967 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYFD---MF 1022
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 1023 APKCG------------GCARAILENY-ISALSSLWHPECFVCRECFTPFVNGSFFEHDG 1069
Query: 123 KLFC 126
+ +C
Sbjct: 1070 QPYC 1073
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 53/119 (44%), Gaps = 22/119 (18%)
Query: 17 LLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPVRFPSGCGVGLSS 73
++ + RTWH + C C + S F R+G+ +C D+ SP
Sbjct: 919 VVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEQDYHNLFSP------------- 965
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFF 131
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 966 ----RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYF 1019
>gi|194878387|ref|XP_001974052.1| GG21514 [Drosophila erecta]
gi|190657239|gb|EDV54452.1| GG21514 [Drosophila erecta]
Length = 178
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL++ + + E +WH C C C L+++ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYERDGKAYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D ++ + WH DC RC C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVI-AMNVKWHRDCFRCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCRHCDEQIVDATFNIQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL++ + + E +WH C C C L+++ F
Sbjct: 62 -------------YTYTCAGCKKPILERTICAMGE-SWHEACFCCGGACKKPLANQSFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKAYCKQDY 118
>gi|456754406|gb|JAA74285.1| paxillin [Sus scrofa]
Length = 557
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.9 bits (141), Expect = 7e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|17136568|ref|NP_476775.1| tailup, isoform A [Drosophila melanogaster]
gi|195580000|ref|XP_002079844.1| GD21801 [Drosophila simulans]
gi|7298500|gb|AAF53720.1| tailup, isoform A [Drosophila melanogaster]
gi|194191853|gb|EDX05429.1| GD21801 [Drosophila simulans]
Length = 534
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|195344936|ref|XP_002039032.1| GM17053 [Drosophila sechellia]
gi|194134162|gb|EDW55678.1| GM17053 [Drosophila sechellia]
Length = 534
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|150416154|sp|Q3MHZ4.2|TGFI1_BOVIN RecName: Full=Transforming growth factor beta-1-induced transcript
1 protein; AltName: Full=Hydrogen peroxide-inducible
clone 5 protein; Short=Hic-5
Length = 456
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 282 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 335
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 336 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 384
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 385 RPLCENHF 392
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 341 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 393
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 394 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 443
Query: 123 KLFCR 127
K +C+
Sbjct: 444 KPYCQ 448
>gi|348539204|ref|XP_003457079.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 1
[Oreochromis niloticus]
Length = 349
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIRLYG 76
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G S + F++ + +H +C RC C L D+
Sbjct: 77 IKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGDEFAL 122
Query: 120 REGKLFCRND 129
RE LFCR D
Sbjct: 123 REDGLFCRAD 132
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYI 72
>gi|344237055|gb|EGV93158.1| Paxillin [Cricetulus griseus]
Length = 388
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 155 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 207
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 208 ---------SLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 257
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 258 KAYCRKDYF 266
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 214 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 267 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 316
Query: 123 KLFCR 127
+ +C
Sbjct: 317 QPYCE 321
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 28/129 (21%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 273 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 331
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 332 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 375
Query: 123 KLFCRNDFF 131
K +C++ F
Sbjct: 376 KPYCQSCFL 384
>gi|355723969|gb|AES08068.1| transforming growth factor beta 1 induced transcript 1 [Mustela
putorius furo]
Length = 460
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 286 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 340 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 388
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 389 RPLCENHF 396
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 345 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 397
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 398 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 447
Query: 123 KLFCR 127
K +C+
Sbjct: 448 KPYCQ 452
>gi|24585610|ref|NP_724318.1| CG31624, isoform A [Drosophila melanogaster]
gi|281365323|ref|NP_001163031.1| CG31624, isoform B [Drosophila melanogaster]
gi|22946984|gb|AAF53979.2| CG31624, isoform A [Drosophila melanogaster]
gi|272407127|gb|ACZ94317.1| CG31624, isoform B [Drosophila melanogaster]
Length = 178
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 61/121 (50%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + ER WH C C C L+ + F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYERDGKPYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+ CA CEKPI D +L + WH +C +C C + ++ + F+ +
Sbjct: 119 ----------ENLFAARCAKCEKPITDSAVL-AMNVKWHRNCFQCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL+K + + ER WH C C C L+ + F
Sbjct: 62 -------------YTYTCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKQDY 118
>gi|440908262|gb|ELR58305.1| LIM/homeobox protein Lhx2, partial [Bos grunniens mutus]
Length = 410
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 34/139 (24%), Positives = 67/139 (48%), Gaps = 27/139 (19%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF----- 57
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++
Sbjct: 50 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYSPSLD 109
Query: 58 ----RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
R V+ + C +G+S+S ++ + + +H +C C C+ L
Sbjct: 110 GPYRRFSVQRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKML 155
Query: 114 S--DKCFSREGKLFCRNDF 130
+ D ++ ++CR F
Sbjct: 156 TTGDHFGMKDSLVYCRLHF 174
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 42 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 101
Query: 129 DFF 131
D++
Sbjct: 102 DYY 104
>gi|345806104|ref|XP_548461.3| PREDICTED: LIM/homeobox protein Lhx2 isoform 1 [Canis lupus
familiaris]
Length = 397
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++ +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYSPSLN 95
Query: 63 FP---------SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
P + C +G+S+S ++ + + +H +C C C+ L
Sbjct: 96 GPYRRFSVQRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKML 141
Query: 114 S--DKCFSREGKLFCRNDF 130
+ D ++ ++CR F
Sbjct: 142 TTGDHFGMKDSLVYCRLHF 160
Score = 54.3 bits (129), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 28 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 87
Query: 129 DFF 131
D++
Sbjct: 88 DYY 90
>gi|403299864|ref|XP_003940694.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 397
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++ +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYSPSLH 95
Query: 63 FP---------SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
P + C +G+S+S ++ + + +H +C C C+ L
Sbjct: 96 GPYRRFSVQRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKML 141
Query: 114 S--DKCFSREGKLFCRNDF 130
+ D ++ ++CR F
Sbjct: 142 TTGDHFGMKDSLVYCRLHF 160
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 28 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 87
Query: 129 DFF 131
D++
Sbjct: 88 DYY 90
>gi|403276816|ref|XP_003930079.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein isoform 1 [Saimiri boliviensis boliviensis]
Length = 461
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|326205389|dbj|BAJ84073.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
Length = 189
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|296233358|ref|XP_002761978.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Callithrix jacchus]
Length = 461
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFTPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFTPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|13097021|gb|AAH03298.1| Pxn protein, partial [Mus musculus]
Length = 378
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 145 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 197
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 198 ---------SLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 247
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 248 KAYCRKDYF 256
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 204 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 256
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 257 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 306
Query: 123 KLFCR 127
+ +C
Sbjct: 307 QPYCE 311
>gi|397473228|ref|XP_003808119.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Pan paniscus]
gi|426362990|ref|XP_004048631.1| PREDICTED: LIM/homeobox protein Lhx2 isoform 2 [Gorilla gorilla
gorilla]
gi|21753589|dbj|BAC04371.1| unnamed protein product [Homo sapiens]
gi|119607983|gb|EAW87577.1| LIM homeobox 2, isoform CRA_b [Homo sapiens]
Length = 397
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 27/139 (19%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++ +
Sbjct: 36 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYSPSLH 95
Query: 63 FP---------SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL 113
P + C +G+S+S ++ + + +H +C C C+ L
Sbjct: 96 GPYRRFSVQRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKML 141
Query: 114 S--DKCFSREGKLFCRNDF 130
+ D ++ ++CR F
Sbjct: 142 TTGDHFGMKDSLVYCRLHF 160
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 2/63 (3%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 28 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 87
Query: 129 DFF 131
D++
Sbjct: 88 DYY 90
>gi|4557194|gb|AAD22552.1|AF116343_1 androgen receptor coactivator ARA55 [Homo sapiens]
Length = 444
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSLLWHPDCFVCRECFAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSLLWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHARRGSL 387
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
CG+ P+ + ++ L R +H D C C L+ F R G
Sbjct: 388 WPTCGL---------------PVTGR-CVSALGRRFHPDHFACTFCLRPLTKGSFQERAG 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|1895062|gb|AAB49892.1| LIM homeobox protein [Drosophila melanogaster]
Length = 534
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 61/134 (45%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S + F++ + +H +C RC C L D+
Sbjct: 111 LFGTKCDKCGNSFSK--------------NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 108
>gi|118343866|ref|NP_001071756.1| transcription factor protein [Ciona intestinalis]
gi|70570111|dbj|BAE06538.1| transcription factor protein [Ciona intestinalis]
Length = 625
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 59/126 (46%), Gaps = 22/126 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC+ I D++LLN+ +WH C +C C L CF +G+L+C+ D+ ++ +
Sbjct: 166 CQGCDYLIEDQYLLNIGGFSWHESCAKCVICRLKLQQSCFFSDGQLYCKKDYQQTRKKC- 224
Query: 65 SGCGVGLSSSMLI---------------SCAGCEKPIL--DKFLLNVLERTWHADCVR-- 105
SGCG + S L+ +C C++ + D+F++N C R
Sbjct: 225 SGCGSKIESEELVMRVATSGYVYHVGCFACVTCKRLLRKGDEFVMNRHNEKRAKSCTRFD 284
Query: 106 --CYDC 109
C +C
Sbjct: 285 LQCKNC 290
Score = 55.1 bits (131), Expect = 9e-06, Method: Composition-based stats.
Identities = 21/57 (36%), Positives = 33/57 (57%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
S + C GC+ I D++LLN+ +WH C +C C L CF +G+L+C+ D+
Sbjct: 161 SQMSICQGCDYLIEDQYLLNIGGFSWHESCAKCVICRLKLQQSCFFSDGQLYCKKDY 217
>gi|213983203|ref|NP_001135504.1| paxillin [Xenopus (Silurana) tropicalis]
gi|195540121|gb|AAI67913.1| Unknown (protein for MGC:135710) [Xenopus (Silurana) tropicalis]
Length = 538
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 305 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 362
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F R
Sbjct: 363 ----------------RCFYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHER 405
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 406 DGKAYCRKDYF 416
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 8 CEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRFPSG 66
C PILDK ++ L+RTWH + C C + F R+GK +CR D+F
Sbjct: 367 CNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHERDGKAYCRKDYF--------- 416
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLF 125
C GC IL+ + ++ L WH +C C +C ++ F +G+ +
Sbjct: 417 ------DMFAPKCGGCTHAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDGQPY 469
Query: 126 CR 127
C
Sbjct: 470 CE 471
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 423 CGGCTHAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEMHYHERRGSL 481
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 482 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 525
Query: 123 KLFCRN 128
K +C+N
Sbjct: 526 KPYCQN 531
>gi|224060584|ref|XP_002191250.1| PREDICTED: lipoma-preferred partner homolog isoform 1 [Taeniopygia
guttata]
Length = 608
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/138 (27%), Positives = 63/138 (45%), Gaps = 28/138 (20%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRS 59
L C+ CE+PI++K +L + +H C C CH +L F+ + G + C DF +
Sbjct: 469 LEKCSVCEEPIMEK-ILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGNIHCIEDFHK- 526
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPIL------DKFLLNVLERTWHADCVRCYDCHHTL 113
+F C V C++PI+ + + L+R +H C RC DC L
Sbjct: 527 --KFAPRCSV------------CKEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGGLL 572
Query: 114 SD----KCFSREGKLFCR 127
S+ C+ +G + C+
Sbjct: 573 SEGDNQGCYPLDGHILCK 590
>gi|157119485|ref|XP_001653405.1| insulinprotein enhancer protein isl [Aedes aegypti]
gi|108883188|gb|EAT47413.1| AAEL001500-PA, partial [Aedes aegypti]
Length = 398
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 20/131 (15%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 7 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVRLFG 66
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
CG S + F++ + +H +C RC C L D+
Sbjct: 67 TKCDKCGSSFSK--------------NDFVMRAKTKIYHIECFRCSACARQLIPGDEFAL 112
Query: 120 RE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 113 RDGGALYCKED 123
Score = 48.9 bits (115), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 7 CVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 61
>gi|158186665|ref|NP_113915.2| LIM domain kinase 1 [Rattus norvegicus]
gi|149063093|gb|EDM13416.1| LIM motif-containing protein kinase 1, isoform CRA_a [Rattus
norvegicus]
gi|149063094|gb|EDM13417.1| LIM motif-containing protein kinase 1, isoform CRA_a [Rattus
norvegicus]
Length = 647
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|156844201|ref|XP_001645164.1| hypothetical protein Kpol_1062p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156115822|gb|EDO17306.1| hypothetical protein Kpol_1062p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 1025
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 38/134 (28%), Positives = 56/134 (41%), Gaps = 25/134 (18%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS-DKCFSR----EGKLFCRND 55
M + CA C++ I+D + E WH C +CY C LS D F R + L C
Sbjct: 9 MTMVCASCKEDIIDDNYFKIGEDKWHIHCFKCYKCEKKLSKDSSFLRMNNSKNSLIC--- 65
Query: 56 FFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
S C C+ C K I D ++ + ++ DC RC CH + D
Sbjct: 66 ---------SDCSN-------YKCSNCNKNIHDTAIILSNDESYCRDCFRCVKCHKDIDD 109
Query: 116 KCFSR-EGKLFCRN 128
+++ + LFC N
Sbjct: 110 LKYAKSKAGLFCYN 123
Score = 43.1 bits (100), Expect = 0.039, Method: Composition-based stats.
Identities = 18/51 (35%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS-DKCFSR 120
+ M + CA C++ I+D + E WH C +CY C LS D F R
Sbjct: 5 IDQDMTMVCASCKEDIIDDNYFKIGEDKWHIHCFKCYKCEKKLSKDSSFLR 55
>gi|115727487|ref|XP_782032.2| PREDICTED: LIM/homeobox protein Lhx9 [Strongylocentrotus
purpuratus]
Length = 474
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 36/128 (28%), Positives = 61/128 (47%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF-RSPV 61
CAGC I D+F L +R WH C++C +C+ L + CF++EG ++C+ D+ R +
Sbjct: 54 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYLKRYGI 113
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ + C VG+ S ++ + E +H C C C+ L D
Sbjct: 114 KKCARCHVGIESHEMV--------------MRARELVYHLACFSCAVCNLELHTGDYYGM 159
Query: 120 REGKLFCR 127
RE ++C+
Sbjct: 160 RENLVYCQ 167
Score = 54.3 bits (129), Expect = 1e-05, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D+F L +R WH C++C +C+ L + CF++EG ++C+ D+
Sbjct: 54 CAGCGGRICDRFYLLAADRQWHTQCLQCCECNVQLDSELSCFAKEGNIYCKEDYL 108
>gi|29469078|ref|NP_817093.1| LIM domain only 4a [Danio rerio]
gi|19879278|gb|AAK26166.1| LIM only 4 protein [Danio rerio]
gi|28277424|gb|AAH45835.1| LIM domain only 4 [Danio rerio]
gi|182890324|gb|AAI64026.1| Lmo4 protein [Danio rerio]
Length = 167
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL ++R WH C++C C L + CFS+ G + CRND+ R
Sbjct: 23 SCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGEIGSTCFSKGGMILCRNDYIR-- 80
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
+ SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 LFGHSG-----------ACSACGQSIPASEMVMRAQGNVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGTIFCEHD 141
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLF 125
G S + SCAGC I D+FLL ++R WH C++C C L + CFS+ G +
Sbjct: 14 TGGSGGAVRSCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGEIGSTCFSKGGMIL 73
Query: 126 CRNDFF 131
CRND+
Sbjct: 74 CRNDYI 79
>gi|348516373|ref|XP_003445713.1| PREDICTED: paxillin-like [Oreochromis niloticus]
Length = 528
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C KPI+ + ++ + RTWH + C C + + F REG+ +C D+ SP
Sbjct: 295 CGACCKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFEREGQPYCEKDYHNLFSP- 352
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 353 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEK 395
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 396 DGKAYCRKDYF 406
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 354 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYF------ 406
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 407 ---------DMFAPKCGGCARAILENY-ISALNCLWHPECFVCRECFTPFVNGSFFEHDG 456
Query: 123 KLFCR 127
+ +C
Sbjct: 457 QPYCE 461
>gi|270004609|gb|EFA01057.1| hypothetical protein TcasGA2_TC003974 [Tribolium castaneum]
Length = 218
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 19/133 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS- 59
+CAGC I D++ L ++R WHA C++C +C L + CF+R+G ++C+ D++R
Sbjct: 28 TTCAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIYCKEDYYRMF 87
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
V C G+S++ L+ + + +H C C C LS D
Sbjct: 88 AVTRCGRCQAGISANELV--------------MRARDSVYHLHCFSCTSCGIPLSKGDHF 133
Query: 118 FSREGKLFCRNDF 130
R+G ++CR +
Sbjct: 134 GMRDGLIYCRPHY 146
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 69 VGLSSSM-LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLF 125
+G SS++ +CAGC I D++ L ++R WHA C++C +C L + CF+R+G ++
Sbjct: 19 LGGSSTLDGTTCAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIY 78
Query: 126 CRNDFF 131
C+ D++
Sbjct: 79 CKEDYY 84
>gi|410984728|ref|XP_003998678.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Felis catus]
Length = 461
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF +
Sbjct: 287 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|432890689|ref|XP_004075479.1| PREDICTED: LIM domain kinase 1-like [Oryzias latipes]
Length = 672
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L C GCE+ I D+ L L WH+ C +C +C LS+ + ++G+LFC+ D++
Sbjct: 24 LPVCKGCERRIYDEQYLQALNSAWHSLCFKCCECSALLSNWYYEKDGQLFCKKDYW---- 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
+ C GC PI ++ E+ +H +C C +C + D
Sbjct: 80 -----------AKFGELCHGCSDPITAGLIMVAGEQKYHPECFSCLNCRVFIGDGDTYAL 128
Query: 119 SREGKLFCRNDFF 131
KL+C N ++
Sbjct: 129 VERSKLYCGNCYY 141
>gi|390480508|ref|XP_003735937.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain kinase 1-like
[Callithrix jacchus]
Length = 620
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/133 (29%), Positives = 60/133 (45%), Gaps = 18/133 (13%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 80 LPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 136
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 137 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 184
Query: 119 SREGKLFCRNDFF 131
KL+C + ++
Sbjct: 185 VEHSKLYCGHCYY 197
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 76 AGSELPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW 135
>gi|332025158|gb|EGI65338.1| LIM homeobox transcription factor 1-beta [Acromyrmex echinatior]
Length = 400
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I DK+++ V ER +H +C+ C C LS CF R+ KL+CR+D+ R
Sbjct: 56 CAGCGRTIADKYVMRVAERNYHEECLSCTACGAMLSHSCFIRDLKLYCRSDYER------ 109
Query: 65 SGCGVGLSSSMLISCAGCEKPI--LDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSR 120
+ CA C + I D + V +H +C C C L R
Sbjct: 110 ---------IFGVKCARCMEKISCSDLVMRPVSGLIFHVECFACCMCGQPLPRGAHYILR 160
Query: 121 EGKLFCRNDF 130
+G+ CR DF
Sbjct: 161 QGQPICRRDF 170
>gi|417402726|gb|JAA48199.1| Putative adaptor protein enigma [Desmodus rotundus]
Length = 557
Score = 61.6 bits (148), Expect = 9e-08, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C D+ SP
Sbjct: 324 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHTLFSP- 381
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 382 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 424
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 425 DGKAYCRKDYF 435
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 383 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 439 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 485
Query: 123 KLFC 126
+ +C
Sbjct: 486 QPYC 489
>gi|194223906|ref|XP_001916580.1| PREDICTED: insulin gene enhancer protein ISL-1 [Equus caballus]
Length = 349
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR +
Sbjct: 119 EFALREDGLFCRAE 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
>gi|47210680|emb|CAF90424.1| unnamed protein product [Tetraodon nigroviridis]
Length = 166
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL +E WH+ C++C C L + C+++ G + CRND+ R +
Sbjct: 24 CAGCGGKIADRFLLYTMESYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR--L 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 82 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 130
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 131 YVNGSLFCEHD 141
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLF 125
VG S CAGC I D+FLL +E WH+ C++C C L + C+++ G +
Sbjct: 14 VGTGSLSWKRCAGCGGKIADRFLLYTMESYWHSRCLKCSCCQAQLGEIGTSCYTKSGMIL 73
Query: 126 CRNDFF 131
CRND+
Sbjct: 74 CRNDYI 79
>gi|348586684|ref|XP_003479098.1| PREDICTED: LIM domain transcription factor LMO4-like [Cavia
porcellus]
Length = 236
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|417396903|gb|JAA45485.1| Putative lim domain transcription factor lmo4 [Desmodus rotundus]
Length = 197
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|443694945|gb|ELT95963.1| hypothetical protein CAPTEDRAFT_167213 [Capitella teleta]
Length = 352
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 16/128 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC I D++LL V+ +WH C++C C L+ CF + G+L C+ D+ R
Sbjct: 15 CCGCGLTIEDRYLLRVMGNSWHERCLQCDFCRAPLTRSCFVKNGRLLCKLDYDRLYAARC 74
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
S C + S+ L+ + + +H C C C H L D+ ++G
Sbjct: 75 SACVQTVPSNELV--------------MRAVGHVFHLQCFVCVACGHQLQRGDQFVVKDG 120
Query: 123 KLFCRNDF 130
+LFCR DF
Sbjct: 121 QLFCRADF 128
>gi|403281531|ref|XP_003932238.1| PREDICTED: paxillin isoform 1 [Saimiri boliviensis boliviensis]
Length = 644
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 411 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 468
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 469 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 511
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 512 DGKAYCRKDYF 522
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 470 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 522
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 523 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 572
Query: 123 KLFCR 127
+ +C
Sbjct: 573 QPYCE 577
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 529 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSL 587
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 588 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 631
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 632 KPYCQNCFL 640
>gi|17568917|ref|NP_508669.1| Protein LIM-4 [Caenorhabditis elegans]
gi|1621631|gb|AAB17273.1| putative transcription factor LIM-4 [Caenorhabditis elegans]
gi|351063300|emb|CCD71434.1| Protein LIM-4 [Caenorhabditis elegans]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 7/134 (5%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+++ C C+ I DKF L++ R +H +C++C C + LS+KCF ++ +C+ +FR+
Sbjct: 94 VIVICTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNKCFYKDKTFYCKGCYFRTH 153
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
V + L CA C++ I ++ +H C C C LS ++
Sbjct: 154 VTSTASSCRELGP----KCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEEY 209
Query: 118 FSREGKLFCRNDFF 131
+EG L C+ F
Sbjct: 210 ALQEGNLLCKQHFL 223
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++++ C C+ I DKF L++ R +H +C++C C + LS+KCF ++ +C+ +F
Sbjct: 93 AVIVICTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNKCFYKDKTFYCKGCYF 150
>gi|348568514|ref|XP_003470043.1| PREDICTED: LIM domain kinase 1 isoform 1 [Cavia porcellus]
Length = 646
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C TLS + + ++G+LFC+ D++
Sbjct: 22 LPVCARCGQRIYDGQYLQALNADWHADCFRCSECGATLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C TLS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCARCGQRIYDGQYLQALNADWHADCFRCSECGATLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|260828933|ref|XP_002609417.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
gi|229294773|gb|EEN65427.1| LIM class homeodomain transcription factor, Lhx6/8 subclass
[Branchiostoma floridae]
Length = 292
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 58/132 (43%), Gaps = 20/132 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFFRSPVR 62
C GC PI DKFLL V ER WH C+RC C L C++RE +FC+ D+ R
Sbjct: 51 CTGCGGPIQDKFLLKVGERQWHVKCLRCSVCQTPLGRHTTCYTREADVFCKADYIR---- 106
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
CA C + I + ++ +H C C C LS ++
Sbjct: 107 -----------QFGTKCAKCCRNIQSNDWVRRAKTHVYHLACFACDACKRQLSTGEEFAL 155
Query: 120 REGKLFCRNDFF 131
+GK+ C++ +
Sbjct: 156 HDGKVLCKSHYL 167
>gi|395501088|ref|XP_003754930.1| PREDICTED: insulin gene enhancer protein ISL-2 [Sarcophilus
harrisii]
Length = 335
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R GK +C+ D+ R
Sbjct: 2 CVGCGTQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYIRLFG 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + E +H +C RC C L D+
Sbjct: 62 IKCAKCKVGFSSSDLV--------------MRARENVYHIECFRCSVCSRQLLPGDEFSL 107
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 108 REHELLCRAD 117
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C +C L + C F R GK +C+ D+
Sbjct: 2 CVGCGTQIHDQYILKVSPDLEWHAACLKCAECSQYLDETCTCFVRNGKTYCKRDYI 57
>gi|345327399|ref|XP_001506418.2| PREDICTED: leupaxin-like [Ornithorhynchus anatinus]
Length = 338
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K ++ L +TWH + C C + F R G +C D+ R SP
Sbjct: 104 CASCQKPIAGK-MITALGQTWHPEHFVCTHCKKEMGSCPFFERNGSAYCSKDYHRLFSP- 161
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L +++ WH + C C + F +
Sbjct: 162 ----------------RCAYCAAPILDK-VLTAMDQNWHPEHFFCTHCGELFGKEGFLEK 204
Query: 121 EGKLFCRNDFF 131
+GK +CR DF
Sbjct: 205 DGKPYCRKDFL 215
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L +++ WH + C C + F ++GK +CR DF
Sbjct: 163 CAYCAAPILDK-VLTAMDQNWHPEHFFCTHCGELFGKEGFLEKDGKPYCRKDFL------ 215
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EG 122
+ C GC +P+L+ +L + ++ WH +C C DC + S F EG
Sbjct: 216 ---------AMFSPKCTGCNQPVLENYL-SAMDSIWHTECFVCGDCFSSFSTGSFFELEG 265
Query: 123 KLFCR 127
+ FC
Sbjct: 266 RPFCE 270
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F EG+ FC + +
Sbjct: 222 CTGCNQPVLENYL-SAMDSIWHTECFVCGDCFSSFSTGSFFELEGRPFCELHYHQRQGTL 280
Query: 64 PSGCGVGLSS 73
GCG ++
Sbjct: 281 CQGCGQPITG 290
>gi|9994171|ref|NP_065204.1| insulin gene enhancer protein ISL-2 [Rattus norvegicus]
gi|1708563|sp|P50480.1|ISL2_RAT RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|531218|gb|AAA62161.1| amino acid feature: homeodomain, bp 647 .. 826; amino acid feature:
LIM1, bp 155 .. 307; amino acid feature: LIM2, bp 341 ..
493 [Rattus norvegicus]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|328707561|ref|XP_003243430.1| PREDICTED: insulin gene enhancer protein isl-1-like isoform 2
[Acyrthosiphon pisum]
Length = 487
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +CH L + CF R+GK +C+ D+ R
Sbjct: 76 CVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDYVRLFG 135
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
C + + L+ + + +H +C RC C L D+
Sbjct: 136 TKCDKCNLSFDRTELV--------------MRAKTKVYHMECFRCNACSRQLIPGDEFAL 181
Query: 120 REGKLFCRND 129
R+ L C+ D
Sbjct: 182 RDDTLLCKQD 191
Score = 50.8 bits (120), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C +CH L + CF R+GK +C+ D+
Sbjct: 76 CVGCGGAINDQYILKVAPDLEWHAACLKCAECHQFLDEHCTCFVRDGKTYCKLDY 130
>gi|28195590|gb|AAO23658.1| LMX1 [Gallus gallus]
Length = 85
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 3/74 (4%)
Query: 60 PVRF-PSGCGVGLSSS--MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
P+R P+ GV L S C GC++PI D+FL+ V E +WH +C++C C L+
Sbjct: 11 PLRSGPATLGVLLGSECPHQAVCEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTS 70
Query: 117 CFSREGKLFCRNDF 130
C+ R+ KL+C+ D+
Sbjct: 71 CYFRDRKLYCKQDY 84
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 56
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY 84
>gi|307189897|gb|EFN74141.1| LIM homeobox transcription factor 1 beta [Camponotus floridanus]
Length = 402
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 60/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I DK+++ V ER +H +C+ C C LS CF R+ KL+CR+D+ R
Sbjct: 58 CAGCGRTIADKYVMRVAERNYHEECLSCTVCGAMLSHSCFIRDLKLYCRSDYER------ 111
Query: 65 SGCGVGLSSSMLISCAGCEKPI--LDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSR 120
+ CA C + I D + V +H +C C C L R
Sbjct: 112 ---------IFGVKCARCMEKISCSDLVMRPVSGLVFHVECFACCMCGQPLPRGAHYILR 162
Query: 121 EGKLFCRNDF 130
+G+ CR DF
Sbjct: 163 QGQPICRRDF 172
>gi|341879785|gb|EGT35720.1| CBN-PXL-1 protein [Caenorhabditis brenneri]
Length = 324
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPI+ + ++ L + WH + C +C L + F R G+ FC D+
Sbjct: 87 CAACGKPIIGQVVI-ALGKMWHPEHYTCCECGTELGQRPFFERNGRAFCEEDYH------ 139
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ C GC + I D+ +NV+ + +H +C C +C+ + F + G
Sbjct: 140 ---------NQFSPKCQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNG 189
Query: 123 KLFCRNDFF 131
+ +C+ DFF
Sbjct: 190 QTYCKRDFF 198
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I D+ +NV+ + +H +C C +C+ + F + G+ +C+ DFFR
Sbjct: 146 CQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFR----- 199
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDC 109
C GC +PI F+ L WH DC C C
Sbjct: 200 ----------LFAPKCNGCSQPITANFIT-ALGTHWHPDCFVCQHC 234
>gi|403281533|ref|XP_003932239.1| PREDICTED: paxillin isoform 2 [Saimiri boliviensis boliviensis]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 191 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 248
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 249 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 291
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 292 DGKAYCRKDYF 302
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 250 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 302
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 303 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 352
Query: 123 KLFCR 127
+ +C
Sbjct: 353 QPYCE 357
Score = 39.7 bits (91), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 29/129 (22%), Positives = 54/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 309 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEVHYHERRGSL 367
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 368 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 411
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 412 KPYCQNCFL 420
>gi|395530587|ref|XP_003767372.1| PREDICTED: LIM domain transcription factor LMO4 [Sarcophilus
harrisii]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|51092230|gb|AAT94528.1| AT25814p [Drosophila melanogaster]
Length = 178
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + ER WH C C C L+ + F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYERDGKPYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH +C +C C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRNCFQCNKCENPITSQTFTID 167
Query: 122 G 122
G
Sbjct: 168 G 168
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVER-- 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
+CAGC+KPIL+K + + ER WH C C C L+ + F
Sbjct: 62 -------------YTYTCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKQDY 118
>gi|403286038|ref|XP_003934314.1| PREDICTED: LIM domain kinase 1 [Saimiri boliviensis boliviensis]
Length = 651
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGRLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPMCASCGQRICDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGRLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|224057485|ref|XP_002195837.1| PREDICTED: LIM domain transcription factor LMO4 [Taeniopygia
guttata]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|149720601|ref|XP_001488881.1| PREDICTED: paxillin [Equus caballus]
Length = 571
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 338 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 395
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 396 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 438
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 439 DGKAYCRKDYF 449
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 397 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 449
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 450 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 499
Query: 123 KLFCR 127
+ +C
Sbjct: 500 QPYCE 504
Score = 38.9 bits (89), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F +G+ +C +
Sbjct: 456 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCEVHYHERRGSL 514
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 515 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 558
Query: 123 KLFCRN 128
K +C+N
Sbjct: 559 KPYCQN 564
>gi|351705454|gb|EHB08373.1| LIM domain transcription factor LMO4 [Heterocephalus glaber]
Length = 214
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ +
Sbjct: 54 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY----I 109
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
R G +C+ C + I + ++ +H C C C + L D+
Sbjct: 110 RLFGNSG---------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 160
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 161 YINGSLFCEHD 171
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 54 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 109
>gi|195118108|ref|XP_002003582.1| GI17994 [Drosophila mojavensis]
gi|193914157|gb|EDW13024.1| GI17994 [Drosophila mojavensis]
Length = 183
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 60/121 (49%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CA C+KPIL++ + + E WH C C C LS++ F R+GK +C+ D+
Sbjct: 70 TCAACKKPILERTICAMGE-NWHECCFVCDGACKKPLSNRPFYERDGKAYCKQDY----- 123
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+ CA CEKPI D ++ + WH DC RC C + ++ + F+ +
Sbjct: 124 ----------EDMFAVRCAKCEKPITDSAIV-AMNAKWHRDCFRCNRCENPITSQTFTID 172
Query: 122 G 122
G
Sbjct: 173 G 173
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 63/131 (48%), Gaps = 20/131 (15%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C + I K ++ L +TWH + C C + D F+ ++G+ C + F
Sbjct: 10 IICHKCNETIT-KRVITALGKTWHPEHFLCRHCDKQIEDATFNIQDGEPVCSDCFVE--- 65
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
R+ S +CA C+KPIL++ + + E WH C C C LS++ F
Sbjct: 66 RYTS------------TCAACKKPILERTICAMGE-NWHECCFVCDGACKKPLSNRPFYE 112
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 113 RDGKAYCKQDY 123
Score = 40.0 bits (92), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG 48
+ CA CEKPI D ++ + WH DC RC C + ++ + F+ +G
Sbjct: 129 VRCAKCEKPITDSAIV-AMNAKWHRDCFRCNRCENPITSQTFTIDG 173
>gi|195034684|ref|XP_001988952.1| GH10298 [Drosophila grimshawi]
gi|193904952|gb|EDW03819.1| GH10298 [Drosophila grimshawi]
Length = 189
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 58/121 (47%), Gaps = 19/121 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSD-KCFSREGKLFCRNDFFRSPV 61
+CA C++PILD+ + + WH +C C C L D F R+GK +C+ D+
Sbjct: 76 TCAACKEPILDR-TIRAMGTNWHENCFVCDGACKQPLKDCAFFERDGKAYCKQDY----- 129
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+ CA CEKPI + ++ + WH+DC C C + ++ K F+ E
Sbjct: 130 ----------EDMFAVRCAKCEKPITENAIV-AMNAKWHSDCFCCNRCENPITTKTFTIE 178
Query: 122 G 122
G
Sbjct: 179 G 179
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 10 KPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRFPSGCG 68
K ++ K ++ L + WH + C DC + D F+ +EG+ C F R+ S
Sbjct: 22 KEMITKRVVCALGKRWHPEHFLCRDCDKQIKDDIFNIQEGEPVCSECFLE---RYTS--- 75
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSD-KCFSREGKLFC 126
+CA C++PILD+ + + WH +C C C L D F R+GK +C
Sbjct: 76 ---------TCAACKEPILDR-TIRAMGTNWHENCFVCDGACKQPLKDCAFFERDGKAYC 125
Query: 127 RNDF 130
+ D+
Sbjct: 126 KQDY 129
Score = 38.1 bits (87), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG 48
+ CA CEKPI + ++ + WH+DC C C + ++ K F+ EG
Sbjct: 135 VRCAKCEKPITENAIV-AMNAKWHSDCFCCNRCENPITTKTFTIEG 179
>gi|440912098|gb|ELR61697.1| LIM domain transcription factor LMO4, partial [Bos grunniens mutus]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 24 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 82 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 130
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 131 YINGSLFCEHD 141
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 24 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 79
>gi|5803072|ref|NP_006760.1| LIM domain transcription factor LMO4 [Homo sapiens]
gi|6754560|ref|NP_034853.1| LIM domain transcription factor LMO4 [Mus musculus]
gi|57527555|ref|NP_001009708.1| LIM domain transcription factor LMO4 [Rattus norvegicus]
gi|77736447|ref|NP_001029923.1| LIM domain transcription factor LMO4 [Bos taurus]
gi|162951803|ref|NP_001106156.1| LIM domain transcription factor LMO4 [Sus scrofa]
gi|239937456|ref|NP_001155241.1| LIM domain transcription factor LMO4 [Mus musculus]
gi|239937458|ref|NP_001155242.1| LIM domain transcription factor LMO4 [Mus musculus]
gi|383872290|ref|NP_001244770.1| LIM domain transcription factor LMO4 [Macaca mulatta]
gi|57088261|ref|XP_537086.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Canis
lupus familiaris]
gi|73959644|ref|XP_867313.1| PREDICTED: LIM domain transcription factor LMO4 isoform 6 [Canis
lupus familiaris]
gi|114557534|ref|XP_001144748.1| PREDICTED: LIM domain transcription factor LMO4 isoform 6 [Pan
troglodytes]
gi|114557536|ref|XP_001144677.1| PREDICTED: LIM domain transcription factor LMO4 isoform 5 [Pan
troglodytes]
gi|149709390|ref|XP_001495634.1| PREDICTED: LIM domain transcription factor LMO4-like [Equus
caballus]
gi|291398567|ref|XP_002715923.1| PREDICTED: LIM domain only 4 isoform 1 [Oryctolagus cuniculus]
gi|291398569|ref|XP_002715924.1| PREDICTED: LIM domain only 4 isoform 2 [Oryctolagus cuniculus]
gi|296208425|ref|XP_002751086.1| PREDICTED: LIM domain transcription factor LMO4-like isoform 1
[Callithrix jacchus]
gi|296208427|ref|XP_002751087.1| PREDICTED: LIM domain transcription factor LMO4-like isoform 2
[Callithrix jacchus]
gi|297664521|ref|XP_002810690.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Pongo
abelii]
gi|297664523|ref|XP_002810691.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Pongo
abelii]
gi|301764579|ref|XP_002917710.1| PREDICTED: LIM domain transcription factor LMO4-like [Ailuropoda
melanoleuca]
gi|332221831|ref|XP_003260067.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Nomascus
leucogenys]
gi|332221833|ref|XP_003260068.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Nomascus
leucogenys]
gi|344278752|ref|XP_003411156.1| PREDICTED: LIM domain transcription factor LMO4-like [Loxodonta
africana]
gi|345801722|ref|XP_003434840.1| PREDICTED: LIM domain transcription factor LMO4 [Canis lupus
familiaris]
gi|395821809|ref|XP_003784224.1| PREDICTED: LIM domain transcription factor LMO4 [Otolemur
garnettii]
gi|397467290|ref|XP_003805357.1| PREDICTED: LIM domain transcription factor LMO4 [Pan paniscus]
gi|402855150|ref|XP_003892201.1| PREDICTED: LIM domain transcription factor LMO4 [Papio anubis]
gi|403305527|ref|XP_003943313.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403305529|ref|XP_003943314.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|410967649|ref|XP_003990330.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Felis
catus]
gi|410967651|ref|XP_003990331.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Felis
catus]
gi|410967653|ref|XP_003990332.1| PREDICTED: LIM domain transcription factor LMO4 isoform 3 [Felis
catus]
gi|426215916|ref|XP_004002215.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Ovis
aries]
gi|426215918|ref|XP_004002216.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Ovis
aries]
gi|426330255|ref|XP_004026136.1| PREDICTED: LIM domain transcription factor LMO4 isoform 1 [Gorilla
gorilla gorilla]
gi|426330257|ref|XP_004026137.1| PREDICTED: LIM domain transcription factor LMO4 isoform 2 [Gorilla
gorilla gorilla]
gi|48428992|sp|P61968.1|LMO4_HUMAN RecName: Full=LIM domain transcription factor LMO4; AltName:
Full=Breast tumor autoantigen; AltName: Full=LIM domain
only protein 4; Short=LMO-4
gi|48428993|sp|P61969.1|LMO4_MOUSE RecName: Full=LIM domain transcription factor LMO4; AltName:
Full=Breast tumor autoantigen; AltName: Full=LIM domain
only protein 4; Short=LMO-4
gi|119371422|sp|Q3SWZ8.1|LMO4_BOVIN RecName: Full=LIM domain transcription factor LMO4; AltName:
Full=LIM domain only protein 4; Short=LMO-4
gi|1914877|gb|AAB51073.1|AAB51073 breast tumor autoantigen [Homo sapiens]
gi|3702854|gb|AAC62958.1| LIM domain transcription factor LMO4 [Mus musculus]
gi|3983077|gb|AAC83789.1| LIM only 4 [Mus musculus]
gi|4063896|gb|AAC98510.1| nuclear LIM-only 4 protein [Mus musculus]
gi|13097522|gb|AAH03488.1| Lmo4 protein [Mus musculus]
gi|13097819|gb|AAH03600.1| LIM domain only 4 [Homo sapiens]
gi|17389229|gb|AAH17673.1| LIM domain only 4 [Homo sapiens]
gi|26348597|dbj|BAC37938.1| unnamed protein product [Mus musculus]
gi|37537228|gb|AAH10278.3| LIM domain only 4 [Mus musculus]
gi|41351121|gb|AAH65818.1| LMO4 protein [Homo sapiens]
gi|56388757|gb|AAH87700.1| LIM domain only 4 [Rattus norvegicus]
gi|72679867|gb|AAI00383.1| Lmo4 protein [Mus musculus]
gi|74198060|dbj|BAE35210.1| unnamed protein product [Mus musculus]
gi|74209791|dbj|BAE23609.1| unnamed protein product [Mus musculus]
gi|74356507|gb|AAI04583.1| LIM domain only 4 [Bos taurus]
gi|119593574|gb|EAW73168.1| LIM domain only 4, isoform CRA_a [Homo sapiens]
gi|119593575|gb|EAW73169.1| LIM domain only 4, isoform CRA_a [Homo sapiens]
gi|123981088|gb|ABM82373.1| LIM domain only 4 [synthetic construct]
gi|148680084|gb|EDL12031.1| LIM domain only 4, isoform CRA_a [Mus musculus]
gi|148680085|gb|EDL12032.1| LIM domain only 4, isoform CRA_a [Mus musculus]
gi|148680086|gb|EDL12033.1| LIM domain only 4, isoform CRA_a [Mus musculus]
gi|149026128|gb|EDL82371.1| LIM domain only 4, isoform CRA_a [Rattus norvegicus]
gi|149026129|gb|EDL82372.1| LIM domain only 4, isoform CRA_a [Rattus norvegicus]
gi|149026130|gb|EDL82373.1| LIM domain only 4, isoform CRA_a [Rattus norvegicus]
gi|160858222|dbj|BAF93844.1| LIM domain only 4 [Sus scrofa]
gi|168275774|dbj|BAG10607.1| LIM domain transcription factor LMO4 [synthetic construct]
gi|296489301|tpg|DAA31414.1| TPA: LIM domain transcription factor LMO4 [Bos taurus]
gi|380785535|gb|AFE64643.1| LIM domain transcription factor LMO4 [Macaca mulatta]
gi|383411513|gb|AFH28970.1| LIM domain transcription factor LMO4 [Macaca mulatta]
gi|384944322|gb|AFI35766.1| LIM domain transcription factor LMO4 [Macaca mulatta]
gi|410208742|gb|JAA01590.1| LIM domain only 4 [Pan troglodytes]
gi|410247022|gb|JAA11478.1| LIM domain only 4 [Pan troglodytes]
gi|410297806|gb|JAA27503.1| LIM domain only 4 [Pan troglodytes]
gi|410340611|gb|JAA39252.1| LIM domain only 4 [Pan troglodytes]
gi|410340613|gb|JAA39253.1| LIM domain only 4 [Pan troglodytes]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|332267306|ref|XP_003282624.1| PREDICTED: paxillin-like [Nomascus leucogenys]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 191 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 248
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 249 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 291
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 292 DGKAYCRKDYF 302
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 250 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 302
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 303 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 352
Query: 123 KLFCR 127
+ +C
Sbjct: 353 QPYCE 357
>gi|426374349|ref|XP_004054037.1| PREDICTED: paxillin isoform 3 [Gorilla gorilla gorilla]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 191 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 248
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 249 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 291
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 292 DGKAYCRKDYF 302
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 250 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 302
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 303 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 352
Query: 123 KLFCR 127
+ +C
Sbjct: 353 QPYCE 357
>gi|170932518|ref|NP_079433.3| paxillin isoform 4 [Homo sapiens]
gi|332840558|ref|XP_003314010.1| PREDICTED: paxillin [Pan troglodytes]
Length = 424
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 191 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 248
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 249 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 291
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 292 DGKAYCRKDYF 302
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 250 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 302
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 303 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 352
Query: 123 KLFCR 127
+ +C
Sbjct: 353 QPYCE 357
>gi|45383886|ref|NP_989443.1| LIM domain transcription factor LMO4 [Gallus gallus]
gi|22347822|gb|AAM95988.1| LIM domain only 4 protein [Gallus gallus]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|355558146|gb|EHH14926.1| hypothetical protein EGK_00938, partial [Macaca mulatta]
gi|355745433|gb|EHH50058.1| hypothetical protein EGM_00823, partial [Macaca fascicularis]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|334321736|ref|XP_001364235.2| PREDICTED: LIM domain transcription factor LMO4-like [Monodelphis
domestica]
Length = 225
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY----I 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
R G +C+ C + I + ++ +H C C C + L D+
Sbjct: 79 RLFGNSG---------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|431897053|gb|ELK06317.1| LIM domain transcription factor LMO4 [Pteropus alecto]
Length = 214
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|123995901|gb|ABM85552.1| LIM domain only 4 [synthetic construct]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|158258593|dbj|BAF85267.1| unnamed protein product [Homo sapiens]
Length = 165
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|268571905|ref|XP_002641180.1| C. briggsae CBR-TAG-327 protein [Caenorhabditis briggsae]
Length = 256
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPI+ + ++ L + WH + C +C L + F R G+ FC D+
Sbjct: 19 CAACGKPIIGQVVI-ALGKMWHPEHYTCCECGTELGQRPFFERNGRAFCEEDY------- 70
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ C GC + I D+ +NV+ + +H +C C +C+ + F + G
Sbjct: 71 --------HNQFSPKCQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNG 121
Query: 123 KLFCRNDFF 131
+ +C+ DFF
Sbjct: 122 QTYCKRDFF 130
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 18/106 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I D+ +NV+ + +H +C C +C+ + F + G+ +C+ DFFR
Sbjct: 78 CQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFR----- 131
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDC 109
C GC +PI F+ L WH DC C C
Sbjct: 132 ----------LFAPKCNGCSQPITSNFIT-ALGTHWHPDCFVCQHC 166
>gi|149041730|gb|EDL95571.1| insulin related protein 2 (islet 2) [Rattus norvegicus]
Length = 359
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|355763645|gb|EHH62200.1| LIM/homeobox protein LMX1B [Macaca fascicularis]
Length = 379
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 59/122 (48%), Gaps = 18/122 (14%)
Query: 12 ILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCGVGL 71
+L +FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 44 VLLRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY--------------- 88
Query: 72 SSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRN 128
C+GC EK +F++ LE +H C C C L D+ +EG+L C+
Sbjct: 89 QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKG 148
Query: 129 DF 130
D+
Sbjct: 149 DY 150
>gi|332262942|ref|XP_003280517.1| PREDICTED: LOW QUALITY PROTEIN: transforming growth factor
beta-1-induced transcript 1 protein [Nomascus
leucogenys]
Length = 461
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 53/128 (41%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGXPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|12851555|dbj|BAB29088.1| unnamed protein product [Mus musculus]
Length = 359
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|431920332|gb|ELK18367.1| Insulin protein enhancer protein ISL-2 [Pteropus alecto]
Length = 306
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 63/131 (48%), Gaps = 19/131 (14%)
Query: 4 SCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSP 60
+C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 30 TCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLF 89
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 90 GIKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFS 135
Query: 119 SREGKLFCRND 129
RE +L CR D
Sbjct: 136 LREHELLCRAD 146
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLF 125
G +C GC I D+F+L V + WHA C++C +C L + C F R+GK +
Sbjct: 21 AGTEKPGTATCVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTY 80
Query: 126 CRNDFF 131
C+ D+
Sbjct: 81 CKRDYV 86
>gi|301605174|ref|XP_002932200.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 331
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 67/131 (51%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 72 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 131
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TLS D
Sbjct: 132 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLSTGDHFGM 177
Query: 120 REGKLFCRNDF 130
+E ++CR F
Sbjct: 178 KENLVYCRIHF 188
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CF 118
R PS LS CAGC I D++ L +++ WH C++C +C L + CF
Sbjct: 59 TRMPS-----LSPEKPALCAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCF 113
Query: 119 SREGKLFCRNDFF 131
+++G ++C+ D++
Sbjct: 114 AKDGSIYCKEDYY 126
>gi|281338511|gb|EFB14095.1| hypothetical protein PANDA_006061 [Ailuropoda melanoleuca]
Length = 164
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|242011268|ref|XP_002426377.1| LIM domain transcription factor LMO4, putative [Pediculus humanus
corporis]
gi|212510454|gb|EEB13639.1| LIM domain transcription factor LMO4, putative [Pediculus humanus
corporis]
Length = 256
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 61/133 (45%), Gaps = 11/133 (8%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR--S 59
C GC I+++FLL+ L+R WH C++C CH L+D CF++ G + C+ D+ R
Sbjct: 97 CGGCGGKIVERFLLHALDRYWHNGCLKCSCCHAMLADIGSSCFTKAGMILCKTDYARLFG 156
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
S CG + + + AG P +V +H C C C L D+
Sbjct: 157 NTGACSACGQTIPPNEFVMRAGAGAPGPHPQSHHV----FHLKCFVCSKCGTQLVQGDRY 212
Query: 118 FSREGKLFCRNDF 130
+ G L C D+
Sbjct: 213 YLLAGSLVCEQDW 225
>gi|395518031|ref|XP_003763171.1| PREDICTED: paxillin, partial [Sarcophilus harrisii]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 125 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 182
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 183 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 225
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 226 DGKAYCRKDYF 236
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 184 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 236
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 237 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 286
Query: 123 KLFCR 127
+ +C
Sbjct: 287 QPYCE 291
>gi|380029439|ref|XP_003698380.1| PREDICTED: uncharacterized protein LOC100872944 [Apis florea]
Length = 478
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I++++LL ++R WH C++C C L++ C++R G + C++D+ R
Sbjct: 255 CAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAALAEIGHSCYTRSGMILCKSDYRRM-- 312
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S +CAGC I + ++ +H C C C + L D+ +
Sbjct: 313 -------FGSSG----ACAGCGNAIPATELVMRAGGSVFHQKCFTCSKCGNQLVSGDRYY 361
Query: 119 SREGKLFCRNDF 130
G C D+
Sbjct: 362 LLSGSPVCETDW 373
>gi|225543484|ref|NP_001139388.1| apterous [Tribolium castaneum]
gi|224459214|gb|ACN43342.1| apterous b [Tribolium castaneum]
Length = 361
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 19/133 (14%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSP 60
+CAGC I D++ L ++R WHA C++C +C L + CF+R+G ++C+ D++R
Sbjct: 28 TTCAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIYCKEDYYRMF 87
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKC 117
+ C C+ I ++ ++ + +H C C C LS D
Sbjct: 88 A--------------VTRCGRCQAGISANELVMRARDSVYHLHCFSCTSCGMPLSKGDHF 133
Query: 118 FSREGKLFCRNDF 130
R+G ++CR +
Sbjct: 134 GMRDGLIYCRPHY 146
Score = 52.4 bits (124), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 43/66 (65%), Gaps = 3/66 (4%)
Query: 69 VGLSSSM-LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLF 125
+G SS++ +CAGC I D++ L ++R WHA C++C +C L + CF+R+G ++
Sbjct: 19 LGGSSTLDGTTCAGCGGRIQDRYYLLAVDRQWHASCLKCCECKLPLDTELTCFARDGNIY 78
Query: 126 CRNDFF 131
C+ D++
Sbjct: 79 CKEDYY 84
>gi|291230776|ref|XP_002735341.1| PREDICTED: LIM domain only 1-like [Saccoglossus kowalevskii]
Length = 311
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 19/133 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCY--DCH-HTLSDKCFSREGKLFCRNDFFRSP 60
+CAGC+K I D++LL LE+ WH DC++C DC + + + + C+ D+ R
Sbjct: 48 NCAGCKKKIKDRYLLKALEQYWHEDCLKCACCDCRLGEVGSTLYIKANLMLCKRDYLRL- 106
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHT--LSDKC 117
G + CA C K I + ++ + +H +C C C+H + DK
Sbjct: 107 --------FGTTG----YCAACAKVIPAFEMVMRARDNVYHLECFACQQCNHRFCVGDKF 154
Query: 118 FSREGKLFCRNDF 130
+ R K+ C D+
Sbjct: 155 YLRNNKILCEEDY 167
>gi|154146254|ref|NP_081673.2| insulin gene enhancer protein ISL-2 [Mus musculus]
gi|408360153|sp|Q9CXV0.2|ISL2_MOUSE RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|148693907|gb|EDL25854.1| insulin related protein 2 (islet 2) [Mus musculus]
gi|183396835|gb|AAI65972.1| Insulin related protein 2 (islet 2) [synthetic construct]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|332844416|ref|XP_003314842.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Pan
troglodytes]
gi|426379890|ref|XP_004056620.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Gorilla
gorilla gorilla]
Length = 360
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|308497120|ref|XP_003110747.1| CRE-PXL-1 protein [Caenorhabditis remanei]
gi|308242627|gb|EFO86579.1| CRE-PXL-1 protein [Caenorhabditis remanei]
Length = 416
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/129 (27%), Positives = 60/129 (46%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C KPI+ + ++ L + WH + C +C L + F R G+ FC D+
Sbjct: 179 CAACGKPIIGQVVI-ALGKMWHPEHYTCCECGTELGQRPFFERNGRAFCEEDYH------ 231
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ C GC + I D+ +NV+ + +H +C C +C+ + F + G
Sbjct: 232 ---------NQFSPKCQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNG 281
Query: 123 KLFCRNDFF 131
+ +C+ DFF
Sbjct: 282 QTYCKRDFF 290
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 48/106 (45%), Gaps = 18/106 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I D+ +NV+ + +H +C C +C+ + F + G+ +C+ DFFR
Sbjct: 238 CQGCHRAITDR-CVNVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFR----- 291
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDC 109
C GC +PI F+ L WH DC C +C
Sbjct: 292 ----------LFAPKCNGCTQPITSNFIT-ALGTHWHPDCFVCQNC 326
>gi|355699533|gb|AES01159.1| LIM domain only 4 [Mustela putorius furo]
Length = 163
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 22 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 80 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 128
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 129 YINGSLFCEHD 139
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 22 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 77
>gi|258645165|ref|NP_001158279.1| tailup [Tribolium castaneum]
Length = 431
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 47 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 106
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S D F++ + +H C +C C L D+
Sbjct: 107 LFGAKCDRCGSSFSK--------------DDFVMRAKSKIYHIKCFKCCACSRPLVPGDE 152
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 153 FALRDGGNLYCKED 166
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 47 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 104
>gi|73746573|gb|AAZ82195.1| transforming growth factor beta 1 isoform alpha-B [Mus musculus]
Length = 460
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 286 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 340 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 388
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 389 RPLCENHF 396
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 345 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 397
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 398 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 447
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 448 KPYCQPCFL 456
>gi|71993652|ref|NP_001023371.1| Protein ALP-1, isoform d [Caenorhabditis elegans]
gi|3879677|emb|CAA90991.1| Protein ALP-1, isoform d [Caenorhabditis elegans]
Length = 1424
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL-FCRNDFFRSPVRF 63
C C KPI+ LN L++ WH C C C + F E L +C D+
Sbjct: 1312 CNKCSKPIISD-CLNALQKKWHPTCFTCAHCQKPFGNSAFYLEQGLPYCEQDW------- 1363
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLS-DKCFSR 120
++ C C PI D+++ L +H++C C C+H L + F++
Sbjct: 1364 --------NALFTTKCVSCRYPIEAGDRWV-EALGNAFHSNCFTCARCNHNLEGESFFAK 1414
Query: 121 EGKLFCR 127
G+ FCR
Sbjct: 1415 NGQPFCR 1421
>gi|296478593|tpg|DAA20708.1| TPA: paxillin-like [Bos taurus]
Length = 427
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 194 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 251
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 252 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 294
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 295 DGKAYCRKDYF 305
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 56/128 (43%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 253 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 305
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC + IL+ + ++ L WH +C C +C + F EG
Sbjct: 306 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVHGSFFEHEG 355
Query: 123 KLFCRNDF 130
+ +C +
Sbjct: 356 QPYCEAHY 363
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 30/129 (23%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 312 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHERRGSL 370
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 371 ---------------CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 414
Query: 123 KLFCRNDFF 131
K +C+N F
Sbjct: 415 KPYCQNCFL 423
>gi|21956641|ref|NP_665804.1| insulin gene enhancer protein ISL-2 [Homo sapiens]
gi|114658283|ref|XP_001147206.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Pan
troglodytes]
gi|297697192|ref|XP_002825752.1| PREDICTED: insulin gene enhancer protein ISL-2 [Pongo abelii]
gi|426379888|ref|XP_004056619.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Gorilla
gorilla gorilla]
gi|20978495|sp|Q96A47.1|ISL2_HUMAN RecName: Full=Insulin gene enhancer protein ISL-2; Short=Islet-2
gi|15080438|gb|AAH11967.1| ISL LIM homeobox 2 [Homo sapiens]
gi|15082435|gb|AAH12136.1| ISL LIM homeobox 2 [Homo sapiens]
gi|119619626|gb|EAW99220.1| ISL2 transcription factor, LIM/homeodomain, (islet-2) [Homo
sapiens]
gi|167773881|gb|ABZ92375.1| ISL LIM homeobox 2 [synthetic construct]
gi|193785483|dbj|BAG50849.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|149691761|ref|XP_001490268.1| PREDICTED: insulin gene enhancer protein ISL-2 [Equus caballus]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|73746587|gb|AAZ82202.1| transforming growth factor beta 1 isoform beta-E [Mus musculus]
gi|73746589|gb|AAZ82203.1| transforming growth factor beta 1 isoform beta-F [Mus musculus]
Length = 399
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 225 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 278
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 279 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 327
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 328 RPLCENHF 335
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 284 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 336
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 337 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 386
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 387 KPYCQPCFL 395
>gi|73746581|gb|AAZ82199.1| transforming growth factor beta 1 isoform beta-B [Mus musculus]
gi|73746585|gb|AAZ82201.1| transforming growth factor beta 1 isoform beta-D [Mus musculus]
gi|148685693|gb|EDL17640.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_b [Mus musculus]
Length = 350
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 176 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 229
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 230 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 278
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 279 RPLCENHF 286
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 235 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 287
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 288 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 337
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 338 KPYCQPCFL 346
>gi|26355418|dbj|BAC41153.1| unnamed protein product [Mus musculus]
Length = 349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCLVRDGKTYCKRDYI 72
>gi|109081997|ref|XP_001105068.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Macaca
mulatta]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|296236843|ref|XP_002763501.1| PREDICTED: insulin gene enhancer protein ISL-2 [Callithrix jacchus]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|321477982|gb|EFX88940.1| hypothetical protein DAPPUDRAFT_4176 [Daphnia pulex]
Length = 199
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CA C + I D+FL+ V RTWH+ C+RC C L ++ CF R G ++CR D+ R
Sbjct: 1 CAACGELITDRFLIQVSGRTWHSTCLRCSVCRTALDNQPSCFVRAGAIYCRADYTR---- 56
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ CA C + I ++ E +H C C C LS ++
Sbjct: 57 -----------TFGAKCARCSRSISAADWVRRAREHVYHLACFACDACRRQLSTGEEFAL 105
Query: 120 REGKLFCRNDFF 131
EG++ C+ +
Sbjct: 106 HEGRVLCKTHYL 117
>gi|1708822|sp|P53669.1|LIMK1_RAT RecName: Full=LIM domain kinase 1; Short=LIMK-1
gi|1000682|dbj|BAA06672.1| LIMK-1 [Rattus norvegicus]
Length = 647
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVGGELKYHPECFICLACGNFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|73746583|gb|AAZ82200.1| transforming growth factor beta 1 isoform beta-C [Mus musculus]
Length = 355
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 181 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 234
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 235 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 283
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 284 RPLCENHF 291
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 240 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 292
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 293 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 342
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 343 KPYCQPCFL 351
>gi|348543221|ref|XP_003459082.1| PREDICTED: LIM/homeobox protein Lhx9-like [Oreochromis niloticus]
Length = 509
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 56/127 (44%), Gaps = 23/127 (18%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSP 60
++CAGC + +LD+F L R WH C+RC C L + R+G ++C+ D+ R
Sbjct: 170 MTCAGCGEQVLDRFFLLAAGRVWHNPCLRCSQCQCELQTHPSLYWRDGNIYCQQDYCR-- 227
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS 119
F G CA C +PI ++ E T+H C C +C L
Sbjct: 228 -MFGGG-----------QCARCFQPIPASDLVMRSGELTFHPHCFSCQECDVKL------ 269
Query: 120 REGKLFC 126
G L+C
Sbjct: 270 MPGNLYC 276
>gi|6678313|ref|NP_033391.1| transforming growth factor beta-1-induced transcript 1 protein [Mus
musculus]
gi|664955|gb|AAA62226.1| Hic-5 [Mus musculus]
gi|5762272|gb|AAD51090.1| paxillin-like protein [Mus musculus]
gi|12805181|gb|AAH02049.1| Tgfb1i1 protein [Mus musculus]
gi|33989889|gb|AAH56362.1| Transforming growth factor beta 1 induced transcript 1 [Mus
musculus]
gi|74224189|dbj|BAE33707.1| unnamed protein product [Mus musculus]
gi|148685691|gb|EDL17638.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Mus musculus]
gi|148685692|gb|EDL17639.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Mus musculus]
Length = 444
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 382 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 431
Query: 123 KLFCR 127
K +C+
Sbjct: 432 KPYCQ 436
>gi|345306388|ref|XP_001506631.2| PREDICTED: LIM domain transcription factor LMO4-like
[Ornithorhynchus anatinus]
Length = 175
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|12659068|gb|AAK01175.1|AF314960_1 hic-5/ARA55 protein [Rattus norvegicus]
Length = 330
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 156 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 209
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 210 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 258
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 259 RPLCENHF 266
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 215 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 267
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 268 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 317
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 318 KPYCQPCFL 326
>gi|395822580|ref|XP_003784594.1| PREDICTED: insulin gene enhancer protein ISL-2 [Otolemur garnettii]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|410922625|ref|XP_003974783.1| PREDICTED: paxillin-like [Takifugu rubripes]
Length = 527
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C KPI+ + ++ + RTWH + C C + + F R+G+ +C D+ SP
Sbjct: 294 CGACCKPIVGQ-VVTAMGRTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEQDYHNLFSP- 351
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 352 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEK 394
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 395 DGKAYCRKDYF 405
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 353 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGSFFGPEGFHEKDGKAYCRKDYF------ 405
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC +PIL+ + ++ L WH +C C +C + F +G
Sbjct: 406 ---------DMFAPKCGGCARPILENY-ISALSSLWHPECFVCRECFTPFVNGSFFEHDG 455
Query: 123 KLFCR 127
+ +C
Sbjct: 456 QPYCE 460
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC +PIL+ ++ + L WH +C C +C + F +G+ +C
Sbjct: 412 CGGCARPILENYI-SALSSLWHPECFVCRECFTPFVNGSFFEHDGQPYCE---------- 460
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
+ + C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 461 -----IHYHARRGSLCSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 514
Query: 123 KLFCRN 128
K +C
Sbjct: 515 KPYCHG 520
>gi|321454678|gb|EFX65839.1| hypothetical protein DAPPUDRAFT_65174 [Daphnia pulex]
Length = 291
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRS-PV 61
C GC I D++ L +ER WH++C+RC +C L CFSR+ +++CR+D++R V
Sbjct: 18 CGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDDYYRLFGV 77
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
R + C + L S+ L+ + + +H C C C+ L+ D
Sbjct: 78 RRCNRCCLPLGSNELV--------------MRARDAVFHLACFTCAACNQPLAKGDIFGM 123
Query: 120 REGKLFCR 127
R+G ++CR
Sbjct: 124 RDGIVYCR 131
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 2/62 (3%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRND 129
S S C GC I D++ L +ER WH++C+RC +C L CFSR+ +++CR+D
Sbjct: 11 SPSPTTLCGGCGFKITDRYYLVAVERAWHSECLRCGECRRPLDTALSCFSRQSRIYCRDD 70
Query: 130 FF 131
++
Sbjct: 71 YY 72
>gi|341925954|dbj|BAK53866.1| insulin gene enhancer protein isl-1 [Dugesia japonica]
Length = 517
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 64/130 (49%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I DKF+L V + WHA C+RC C+ L +K CF ++GK +C+ D+ + +
Sbjct: 28 CVGCGGAITDKFILRVQPDLEWHARCLRCVKCNRGLDEKNTCFVKDGKTYCKEDYQKLFL 87
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C GL S ++L+V R +H C++C C+ L D+
Sbjct: 88 QVCAACNRGLHKS--------------DYVLHVGSRIYHISCMKCVACNRILQTGDEFAL 133
Query: 120 REGKLFCRND 129
R + C +D
Sbjct: 134 RPNGVICLHD 143
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDF 130
C GC I DKF+L V + WHA C+RC C+ L +K CF ++GK +C+ D+
Sbjct: 28 CVGCGGAITDKFILRVQPDLEWHARCLRCVKCNRGLDEKNTCFVKDGKTYCKEDY 82
>gi|308097158|gb|ADO14133.1| ISL1 transcription factor [Notophthalmus viridescens]
Length = 349
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C C C L D
Sbjct: 73 RLYGIKCAKCNIGFSK--------------NDFVMRARSKVYHIECFSCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
>gi|296475432|tpg|DAA17547.1| TPA: ISL LIM homeobox 2 [Bos taurus]
gi|440909295|gb|ELR59218.1| Insulin enhancer protein ISL-2 [Bos grunniens mutus]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|73746591|gb|AAZ82204.1| transforming growth factor beta 1 isoform beta-G [Mus musculus]
Length = 402
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 228 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 281
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 282 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 330
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 331 RPLCENHF 338
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 287 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 340 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 389
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 390 KPYCQPCFL 398
>gi|395842964|ref|XP_003794276.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Otolemur garnettii]
Length = 461
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|426245486|ref|XP_004016541.1| PREDICTED: leupaxin [Ovis aries]
Length = 386
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L + WH + C C + S F R G +C D+ R SP
Sbjct: 152 CASCQKPIAGK-VIHALGQAWHPEHFVCTHCKAEIGSSPFFERSGLAYCSEDYHRLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L +++TWH + C C ++ F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMDQTWHPEHFFCAHCGEVFGEEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 59.3 bits (142), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L +++TWH + C C ++ F ++ K +CR DF
Sbjct: 211 CAYCAAPILDK-VLTAMDQTWHPEHFFCAHCGEVFGEEGFHEKDKKPYCRKDFL------ 263
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
+ C GC +P+++ + L+ + WH +C C DC S F +G
Sbjct: 264 ---------AMFAPRCGGCNRPVVENY-LSAMGTVWHPECFVCGDCFTGFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 39.3 bits (90), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+++ +L + + WH +C C DC S F +G+ FC + +
Sbjct: 270 CGGCNRPVVENYL-SAMGTVWHPECFVCGDCFTGFSTGSFFELDGRPFCELHYHQRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
C GC +PI + ++ + +H + C C LS F + G
Sbjct: 329 ---------------CHGCGQPITGR-CVSAMGYKFHPEHFVCTFCLTQLSKGVFKEQNG 372
Query: 123 KLFCR 127
K +C+
Sbjct: 373 KTYCQ 377
>gi|73746579|gb|AAZ82198.1| transforming growth factor beta 1 isoform alpha-C [Mus musculus]
gi|74152986|dbj|BAE34493.1| unnamed protein product [Mus musculus]
Length = 376
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 202 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 255
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 256 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 304
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 305 RPLCENHF 312
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 261 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 313
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 314 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 363
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 364 KPYCQPCFL 372
>gi|300795417|ref|NP_001178166.1| insulin gene enhancer protein ISL-2 [Bos taurus]
Length = 359
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|149067637|gb|EDM17189.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_c [Rattus norvegicus]
Length = 350
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 176 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 229
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 230 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 278
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 279 RPLCENHF 286
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 235 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 287
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 288 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 337
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 338 KPYCQPCFL 346
>gi|426248250|ref|XP_004017877.1| PREDICTED: LOW QUALITY PROTEIN: insulin gene enhancer protein ISL-2
[Ovis aries]
Length = 366
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|410922098|ref|XP_003974520.1| PREDICTED: insulin gene enhancer protein isl-1-like [Takifugu
rubripes]
Length = 331
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYIRLYG 76
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G S + F++ + +H +C RC C L D+
Sbjct: 77 IKCAKCNIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGDEFAL 122
Query: 120 REGKLFCRND 129
R+ LFCR D
Sbjct: 123 RDDGLFCRAD 132
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 17 CVGCGNQIHDQYILRVSPDLEWHAACLKCAECSQYLDESCTCFVRDGKTYCKRDYI 72
>gi|402863231|ref|XP_003895934.1| PREDICTED: LIM domain kinase 1 isoform 1 [Papio anubis]
Length = 647
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 56/128 (43%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WH DC RC DC +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHTDCFRCCDCSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WH DC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHTDCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|344256986|gb|EGW13090.1| Transforming growth factor beta-1-induced transcript 1 protein
[Cricetulus griseus]
Length = 479
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 305 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 358
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 359 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 407
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 408 RPLCENHF 415
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 53/129 (41%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 364 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 416
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 417 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 466
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 467 KPYCQPCFL 475
>gi|34536230|dbj|BAC87586.1| unnamed protein product [Homo sapiens]
Length = 403
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 59/129 (45%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 170 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 222
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
+ C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 223 ---------NLFSPRCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 272
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 273 KAYCRKDYF 281
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F
Sbjct: 229 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYF------ 281
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 282 ---------DMFAPKCGGCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 331
Query: 123 KLFCR 127
+ +C
Sbjct: 332 QPYCE 336
>gi|149067635|gb|EDM17187.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_a [Rattus norvegicus]
Length = 444
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 270 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 323
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 324 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 372
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 373 RPLCENHF 380
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 329 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 381
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 382 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 431
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 432 KPYCQPCFL 440
>gi|47217859|emb|CAG02352.1| unnamed protein product [Tetraodon nigroviridis]
Length = 235
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 62/130 (47%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C +G SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCNLGFSSSDLV--------------MRARDHVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REEELLCRAD 142
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 79 CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>gi|395858088|ref|XP_003801406.1| PREDICTED: leupaxin [Otolemur garnettii]
Length = 404
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 229 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGTEGFHEKDKKPYCRKDFL---AMF 284
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC T + F +G
Sbjct: 285 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFSTFNTGSFFELDG 331
Query: 123 KLFCR 127
+ FC
Sbjct: 332 RPFCE 336
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C D+ SP
Sbjct: 170 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKKEIGSTPFFERSGLAYCPKDYHDLFSP- 227
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 228 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGTEGFHEK 270
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 271 DKKPYCRKDFL 281
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC T + F +G+ FC + R
Sbjct: 288 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFSTFNTGSFFELDGRPFCELHYHRRQGTL 346
Query: 64 PSGCGVGLSS 73
GCG ++
Sbjct: 347 CHGCGQPITG 356
>gi|348584370|ref|XP_003477945.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein-like [Cavia porcellus]
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|270011029|gb|EFA07477.1| tailup [Tribolium castaneum]
Length = 411
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 20/134 (14%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 23 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 82
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
CG S D F++ + +H C +C C L D+
Sbjct: 83 LFGAKCDRCGSSFSK--------------DDFVMRAKSKIYHIKCFKCCACSRPLVPGDE 128
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 129 FALRDGGNLYCKED 142
Score = 48.5 bits (114), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 76 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 23 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDY 80
>gi|47220024|emb|CAG12172.1| unnamed protein product [Tetraodon nigroviridis]
Length = 53
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 56
CAGCE PI D+FLL V ER+WH CV+C C L+ C+ R+ L+C++D+
Sbjct: 1 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDY 52
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 36/52 (69%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
CAGCE PI D+FLL V ER+WH CV+C C L+ C+ R+ L+C++D+
Sbjct: 1 CAGCEAPIADRFLLRVNERSWHETCVKCAVCLSALTGTCYCRDRLLYCKHDY 52
>gi|327277117|ref|XP_003223312.1| PREDICTED: LIM domain-binding protein 3-like [Anolis carolinensis]
Length = 652
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+CA C ++ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 534 TCARCHTKVMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDY------ 586
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S
Sbjct: 587 ------VALFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYS 636
Query: 120 REGKLFCR 127
++ K C+
Sbjct: 637 KKDKPLCK 644
>gi|195425865|ref|XP_002061183.1| GK10344 [Drosophila willistoni]
gi|194157268|gb|EDW72169.1| GK10344 [Drosophila willistoni]
Length = 186
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C C IL + ++ V R WH C RC C +L + F G LFC+ DF
Sbjct: 65 CYACGMAILQRGIIAV-GRKWHEKCFRCVSCSKSLVTSTFFEVNGYLFCKLDF------- 116
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+L CAGC +PI DK + L WH++C +C CH ++ FS R G
Sbjct: 117 --------RESLLSRCAGCAEPI-DKNAVVALNTKWHSNCFKCCICHRQITGYKFSIRSG 167
Query: 123 KLFC 126
+ C
Sbjct: 168 RAVC 171
Score = 39.7 bits (91), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFC 52
+L CAGC +PI DK + L WH++C +C CH ++ FS R G+ C
Sbjct: 120 LLSRCAGCAEPI-DKNAVVALNTKWHSNCFKCCICHRQITGYKFSIRSGRAVC 171
>gi|326670376|ref|XP_002663297.2| PREDICTED: LIM domain transcription factor LMO4.2 [Danio rerio]
Length = 195
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH+ C++C C L + C+S+ G + CR D+ R
Sbjct: 15 SCAGCGGRISDRFLLFSMERYWHSRCLKCSCCQAQLGEIGSTCYSKSGMILCRTDYIRL- 73
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G + +C+ C + I + ++ +H C C C + L D+
Sbjct: 74 --------FGHTG----ACSACGQSIPASEMVMRAQGNVYHLKCFSCATCRNQLVPGDRF 121
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 122 HYVNGTIFCEHD 133
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
SCAGC I D+FLL +ER WH+ C++C C L + C+S+ G + CR D+
Sbjct: 15 SCAGCGGRISDRFLLFSMERYWHSRCLKCSCCQAQLGEIGSTCYSKSGMILCRTDYI 71
>gi|156393340|ref|XP_001636286.1| predicted protein [Nematostella vectensis]
gi|156223388|gb|EDO44223.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRS 59
C GC +PI D+FL+ V++ WH C++C C LS CFS++ KL+CR D+ ++
Sbjct: 1 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKDRKLYCRTDYEKT 55
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 35/52 (67%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
C GC +PI D+FL+ V++ WH C++C C LS CFS++ KL+CR D+
Sbjct: 1 CTGCNEPIEDRFLMKVVDEAWHESCLQCCICRSQLSRSCFSKDRKLYCRTDY 52
>gi|73746575|gb|AAZ82196.1| transforming growth factor beta 1 isoform alpha-D [Mus musculus]
Length = 351
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 177 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 230
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 231 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 279
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 280 RPLCENHF 287
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 52/129 (40%), Gaps = 19/129 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 236 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 288
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 289 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 338
Query: 123 KLFCRNDFF 131
K +C+ F
Sbjct: 339 KPYCQPCFL 347
>gi|426368553|ref|XP_004051271.1| PREDICTED: leupaxin isoform 2 [Gorilla gorilla gorilla]
Length = 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 157 CASCQKPIAGK-VIHTLGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 334 CHGCGQPIT 342
>gi|291410993|ref|XP_002721772.1| PREDICTED: transforming growth factor beta 1 induced transcript 1
[Oryctolagus cuniculus]
Length = 462
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 288 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 341
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 342 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECFAPFSGGSFFEHEG 390
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 391 RPLCENHF 398
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 347 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFH------ 399
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 400 ---------ARRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 449
Query: 123 KLFCR 127
K +C+
Sbjct: 450 KPYCQ 454
>gi|221042612|dbj|BAH12983.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF
Sbjct: 191 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL------ 243
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
+ C GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 244 ---------AMFSPKCGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 293
Query: 123 KLFCR 127
+ FC
Sbjct: 294 RPFCE 298
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 132 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 189
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 190 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 232
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 233 DKKPYCRKDFL 243
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 250 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 308
Query: 64 PSGCGVGLSS 73
GCG ++
Sbjct: 309 CHGCGQPITG 318
>gi|403304939|ref|XP_003943036.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 360
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 4 SCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSP 60
+C GC I D F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 26 TCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLF 85
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 86 GIKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFS 131
Query: 119 SREGKLFCRND 129
RE +L CR D
Sbjct: 132 LREHELLCRAD 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
+C GC I D F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 26 TCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|332252494|ref|XP_003275389.1| PREDICTED: leupaxin isoform 2 [Nomascus leucogenys]
Length = 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + + F R G +C ND+ + SP
Sbjct: 157 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGTSPFFERSGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 334 CHGCGQPIT 342
>gi|225708026|gb|ACO09859.1| LIM/homeobox protein Lhx9 [Osmerus mordax]
Length = 317
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V+
Sbjct: 71 CAGCGGKISDRYYLLAVDKRWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRFSVQ 130
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ C +G+S+S ++ + + +H C C C+ TL+ D +
Sbjct: 131 RCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGMK 176
Query: 121 EGKLFCRNDF 130
+ ++CR F
Sbjct: 177 DSLVYCRVHF 186
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKRWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>gi|150416156|sp|Q62219.2|TGFI1_MOUSE RecName: Full=Transforming growth factor beta-1-induced transcript
1 protein; AltName: Full=Androgen receptor-associated
protein of 55 kDa; AltName: Full=Hydrogen
peroxide-inducible clone 5 protein; Short=Hic-5;
AltName: Full=TGF beta-stimulated clone 5; Short=TSC-5
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 399 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|551545|gb|AAC52254.1| limk [Mus musculus]
Length = 646
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|387916006|gb|AFK11612.1| PDZ and LIM domain protein 7 [Callorhinchus milii]
Length = 466
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 60/128 (46%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C K I ++L+ L R+WH + C+ C TL++ F E G +FC N +
Sbjct: 291 CAHCNKVIKGRYLV-ALGRSWHPEEFTCHQCKATLTEGGFFEEMGSVFCGNCY------- 342
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
S +CA C++ I+ +++ L+ WH C C C + +K F EG
Sbjct: 343 --------ESKHAPNCAKCKQKIVGG-IMHALKMIWHVKCFNCAACKTPIRNKAFYMEEG 393
Query: 123 KLFCRNDF 130
+ +C D+
Sbjct: 394 QPYCEKDY 401
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 56/132 (42%), Gaps = 21/132 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
+CA C++ I+ +++ L+ WH C C C + +K F EG+ +C D+
Sbjct: 349 NCAKCKQKIVGG-IMHALKMIWHVKCFNCAACKTPIRNKAFYMEEGQPYCEKDY------ 401
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI--LDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
C GC+ I D+F L L +WH C C CH L K F S
Sbjct: 402 ---------EKMFGTKCQGCDFKIDAGDRF-LEALGYSWHDTCFICAVCHINLEGKTFYS 451
Query: 120 REGKLFCRNDFF 131
++ K C+ F
Sbjct: 452 KKEKPLCKTHAF 463
>gi|403304937|ref|XP_003943035.1| PREDICTED: insulin gene enhancer protein ISL-2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 359
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 62/131 (47%), Gaps = 19/131 (14%)
Query: 4 SCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSP 60
+C GC I D F+L V + WHA C++C +C L + CF R+GK +C+ D+ R
Sbjct: 26 TCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLF 85
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 86 GIKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFS 131
Query: 119 SREGKLFCRND 129
RE +L CR D
Sbjct: 132 LREHELLCRAD 142
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 78 SCAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
+C GC I D F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 26 TCVGCGSQIHDPFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYV 82
>gi|397512176|ref|XP_003826426.1| PREDICTED: leupaxin isoform 2 [Pan paniscus]
Length = 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 157 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 334 CHGCGQPIT 342
>gi|354505563|ref|XP_003514837.1| PREDICTED: transforming growth factor beta-1-induced transcript 1
protein [Cricetulus griseus]
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 399 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|348560658|ref|XP_003466130.1| PREDICTED: LIM domain-binding protein 3-like isoform 9 [Cavia
porcellus]
Length = 668
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 551 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 602
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 603 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 653
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 654 KDKPLCK 660
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 492 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 550
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 551 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 592
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 593 DGEPYCEKDY 602
>gi|348560656|ref|XP_003466129.1| PREDICTED: LIM domain-binding protein 3-like isoform 8 [Cavia
porcellus]
Length = 716
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 599 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 650
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 651 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 701
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 702 KDKPLCK 708
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 540 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 598
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 599 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 640
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 641 DGEPYCEKDY 650
>gi|348560646|ref|XP_003466124.1| PREDICTED: LIM domain-binding protein 3-like isoform 3 [Cavia
porcellus]
Length = 709
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 592 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 643
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 644 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 694
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 695 KDKPLCK 701
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 533 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 591
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 592 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 633
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 634 DGEPYCEKDY 643
>gi|348560642|ref|XP_003466122.1| PREDICTED: LIM domain-binding protein 3-like isoform 1 [Cavia
porcellus]
Length = 673
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 556 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 607
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 608 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 658
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 659 KDKPLCK 665
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 497 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 555
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 556 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 597
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 598 DGEPYCEKDY 607
>gi|221316659|ref|NP_001137467.1| leupaxin isoform 1 [Homo sapiens]
gi|194374937|dbj|BAG62583.1| unnamed protein product [Homo sapiens]
Length = 391
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 157 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 38.9 bits (89), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 334 CHGCGQPIT 342
>gi|74096249|ref|NP_001027767.1| LIM homeodomain protein [Ciona intestinalis]
gi|3150146|emb|CAA06919.1| LIM homeodomain protein [Ciona intestinalis]
Length = 381
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 19/130 (14%)
Query: 5 CAGCEKPILDKFLLNVLER-TWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPV 61
C GC PI D+++L V WHA C++C DC L + CF R+GK +C+ D+ R
Sbjct: 19 CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCGQYLDETCTCFVRDGKTYCKRDYTRLFG 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ CG+ S + F++ ++ +H C +C C L D+
Sbjct: 79 TKCNKCGLCFSK--------------NDFVMRARDKIYHIQCFKCVACSRQLIPGDEFAL 124
Query: 120 REGKLFCRND 129
R+ LFC+ D
Sbjct: 125 RDDGLFCKAD 134
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 39/82 (47%), Gaps = 16/82 (19%)
Query: 52 CRNDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLER-TWHADCVRCYDCH 110
CR +P R P C GC PI D+++L V WHA C++C DC
Sbjct: 5 CRPRLIATPCRIPL-------------CVGCGSPIHDQYILRVAPNLEWHAGCLKCADCG 51
Query: 111 HTLSDKC--FSREGKLFCRNDF 130
L + C F R+GK +C+ D+
Sbjct: 52 QYLDETCTCFVRDGKTYCKRDY 73
>gi|148226543|ref|NP_001081420.1| paxillin [Xenopus laevis]
gi|11878269|gb|AAG40874.1|AF317890_1 paxillin [Xenopus laevis]
Length = 548
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 315 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQDEIGSRNFFERDGQPYCEKDYHNLFSP- 372
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILD+ ++ L+RTWH + C C + F R
Sbjct: 373 ----------------RCFYCNGPILDR-VVTALDRTWHPEHFFCAQCGAFFGPEGFHER 415
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 416 DGKAYCRKDYF 426
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILD+ ++ L+RTWH + C C + F R+GK +CR D+F
Sbjct: 374 CFYCNGPILDR-VVTALDRTWHPEHFFCAQCGAFFGPEGFHERDGKAYCRKDYF------ 426
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
C GC IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 427 ---------DMFAPKCGGCTHAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 476
Query: 123 KLFCR 127
+ +C
Sbjct: 477 QPYCE 481
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 433 CGGCTHAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEMHYHERRGSL 491
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 492 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 535
Query: 123 KLFCRN 128
K +C+N
Sbjct: 536 KPYCQN 541
>gi|440892917|gb|ELR45904.1| LIM domain-binding protein 3 [Bos grunniens mutus]
Length = 720
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 603 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 654
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 655 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 705
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 706 KDKPLCK 712
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +PV
Sbjct: 544 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPV 602
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 603 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 644
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 645 DGEPYCEKDY 654
>gi|73746577|gb|AAZ82197.1| transforming growth factor beta 1 isoform alpha-E [Mus musculus]
Length = 415
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 241 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 294
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 295 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 343
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 344 RPLCENHF 351
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 300 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 353 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 402
Query: 123 KLFCR 127
K +C+
Sbjct: 403 KPYCQ 407
>gi|344293810|ref|XP_003418613.1| PREDICTED: hypothetical protein LOC100655388 [Loxodonta africana]
Length = 727
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 610 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 661
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 662 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 712
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 713 KDKPLCK 719
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 56/130 (43%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C+ C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 551 CSHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQSSVYCERCYEQFFAPL 609
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 610 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 651
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 652 DGEPYCEKDY 661
>gi|335301886|ref|XP_003359314.1| PREDICTED: hypothetical protein LOC100151883 [Sus scrofa]
Length = 715
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 598 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 649
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 650 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 700
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 701 KDKPLCK 707
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +PV
Sbjct: 539 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPV 597
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 598 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 639
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 640 DGEPYCEKDY 649
>gi|300797521|ref|NP_001178769.1| transforming growth factor beta-1-induced transcript 1 protein
[Rattus norvegicus]
gi|150416157|sp|Q99PD6.2|TGFI1_RAT RecName: Full=Transforming growth factor beta-1-induced transcript
1 protein; AltName: Full=Androgen receptor-associated
protein of 55 kDa; AltName: Full=Hydrogen
peroxide-inducible clone 5 protein; Short=Hic-5
gi|149067636|gb|EDM17188.1| transforming growth factor beta 1 induced transcript 1, isoform
CRA_b [Rattus norvegicus]
Length = 461
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 54/128 (42%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ----- 340
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
C GC+ PILD + ++ L WH DC C +C S F EG
Sbjct: 341 ----------LFAPRCQGCQGPILDNY-ISALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 51/125 (40%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFH------ 398
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 399 ---------AQRGSLCATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 448
Query: 123 KLFCR 127
K +C+
Sbjct: 449 KPYCQ 453
>gi|410920794|ref|XP_003973868.1| PREDICTED: LIM domain transcription factor LMO4-like [Takifugu
rubripes]
Length = 271
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL +E WH+ C++C C L + C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYTMESYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YVNGSLFCEHD 140
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLF 125
VG S CAGC I D+FLL +E WH+ C++C C L + C+++ G +
Sbjct: 13 VGTGSLSWKRCAGCGGKIADRFLLYTMESYWHSRCLKCSCCQAQLGEIGTSCYTKSGMIL 72
Query: 126 CRNDFF 131
CRND+
Sbjct: 73 CRNDYI 78
>gi|426255308|ref|XP_004021296.1| PREDICTED: LIM domain kinase 1 [Ovis aries]
Length = 608
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 7 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---A 63
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 64 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 111
Query: 119 SREGKLFC 126
KL+C
Sbjct: 112 VEHSKLYC 119
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+ S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 3 NGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW 62
>gi|327282668|ref|XP_003226064.1| PREDICTED: paxillin-like [Anolis carolinensis]
Length = 644
Score = 60.5 bits (145), Expect = 2e-07, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+ + +C D+ SP
Sbjct: 411 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDSQPYCEKDYHNLFSP- 468
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 469 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 511
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 512 DGKAYCRKDYF 522
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 58/124 (46%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 470 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 525
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ + ++ L WH +C C +C ++ F +G
Sbjct: 526 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDG 572
Query: 123 KLFC 126
+ +C
Sbjct: 573 QPYC 576
>gi|227430299|ref|NP_001153058.1| LIM homeobox 2a [Danio rerio]
gi|226434001|gb|ACO56117.1| LIM homeodomain protein 2a [Danio rerio]
Length = 320
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D+F L ER WH C++C C L + CFS+ G ++C+ D++R R
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYYR---R 69
Query: 63 FPSG----CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
F S C +G+S++ ++ + + +H C C CH L D
Sbjct: 70 FSSQRCARCHLGISATEIV--------------MRARDLVYHLSCFSCATCHKVLLTGDH 115
Query: 117 CFSREGKLFCR 127
+E ++CR
Sbjct: 116 YGMKETSVYCR 126
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D+F L ER WH C++C C L + CFS+ G ++C+ D++
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYY 67
>gi|44194074|gb|AAS46773.1| insulin enhancer binding protein [Rattus norvegicus]
Length = 326
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 64/134 (47%), Gaps = 20/134 (14%)
Query: 2 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + CF R+GK + + D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYSKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSK--------------NDFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 76 LIS-CAGCEKPILDKFLLNV-LERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 131
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK + + D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYSKRDYI 72
>gi|126333214|ref|XP_001367201.1| PREDICTED: leupaxin-like [Monodelphis domestica]
Length = 381
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 61/132 (46%), Gaps = 24/132 (18%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFR--SP 60
CA C+KPI+ K ++ L TWH + C C + S F R G +C D+ + SP
Sbjct: 146 CASCQKPIVGK-MITALGWTWHPEHFVCTHCKKEIGCSSPFFERNGSAYCSQDYHQLFSP 204
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
CA C PILDK +L +++TWH + C C +++ F
Sbjct: 205 -----------------RCAYCAAPILDK-VLTAMDQTWHPEHFFCSHCGEVFNEEGFLE 246
Query: 120 REGKLFCRNDFF 131
++ K +CR DF
Sbjct: 247 KDKKPYCRRDFL 258
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC S F G+ FC +
Sbjct: 265 CRGCNRPVLENYL-SAMDAVWHPECFVCGDCFKPFSTASFFELHGQPFCELHYHH----- 318
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GCE+PI + ++ + R +H + C C L+ F +
Sbjct: 319 ----------RRGTICPGCEQPIRGR-CVSAMGRRFHPEHFVCAFCLSQLNKGVFREKND 367
Query: 123 KLFCR 127
K +C+
Sbjct: 368 KAYCQ 372
>gi|49168546|emb|CAG38768.1| LPXN [Homo sapiens]
Length = 386
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 329 CHGCGQPIT 337
>gi|348560652|ref|XP_003466127.1| PREDICTED: LIM domain-binding protein 3-like isoform 6 [Cavia
porcellus]
Length = 648
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 531 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 582
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 583 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 633
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 634 KDKPLCK 640
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 472 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 530
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 531 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 572
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 573 DGEPYCEKDY 582
>gi|426368551|ref|XP_004051270.1| PREDICTED: leupaxin isoform 1 [Gorilla gorilla gorilla]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHTLGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLSS 73
GCG ++
Sbjct: 329 CHGCGQPITG 338
>gi|332252492|ref|XP_003275388.1| PREDICTED: leupaxin isoform 1 [Nomascus leucogenys]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + + F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGTSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 329 CHGCGQPIT 337
>gi|194891391|ref|XP_001977483.1| GG18228 [Drosophila erecta]
gi|190649132|gb|EDV46410.1| GG18228 [Drosophila erecta]
Length = 200
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 55/120 (45%), Gaps = 19/120 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCY-DCHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+C GC++PIL++ + +E++WH DC C C L F R+G +CR DF
Sbjct: 87 TCFGCKQPILER-TIKAMEQSWHEDCFVCNGPCKKPLVGTSFYERDGHPYCRADF----- 140
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CAGC PI + ++ L WH DC +C CH ++ F+ E
Sbjct: 141 ----------EQLFAARCAGCGNPITENAIV-ALNAKWHRDCFQCKKCHTPITASSFAVE 189
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 59/121 (48%), Gaps = 17/121 (14%)
Query: 12 ILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCGVGL 71
++ + ++ L +TWH + C DC +S+ F+ + +D F V+ SG
Sbjct: 35 VIQQRIITALGKTWHPEHFACKDCQRPISEATFNIQADEPVCSDCF---VKIYSG----- 86
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCY-DCHHTLSDKCF-SREGKLFCRND 129
+C GC++PIL++ + +E++WH DC C C L F R+G +CR D
Sbjct: 87 ------TCFGCKQPILER-TIKAMEQSWHEDCFVCNGPCKKPLVGTSFYERDGHPYCRAD 139
Query: 130 F 130
F
Sbjct: 140 F 140
>gi|432107070|gb|ELK32502.1| LIM domain transcription factor LMO4 [Myotis davidii]
Length = 198
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 61/131 (46%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R +
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIR--L 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYI 78
>gi|297688676|ref|XP_002821805.1| PREDICTED: leupaxin isoform 1 [Pongo abelii]
Length = 391
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 157 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C GC +PI + + + +H + C C LS F +
Sbjct: 334 ---------------CHGCGQPITGR-CITAMGYKFHPEHFVCAFCLTQLSKGIFREQND 377
Query: 123 KLFCR 127
K++C+
Sbjct: 378 KIYCQ 382
>gi|397512174|ref|XP_003826425.1| PREDICTED: leupaxin isoform 1 [Pan paniscus]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 38.9 bits (89), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 329 CHGCGQPIT 337
>gi|8272408|dbj|BAA96456.1| paxillin [Xenopus laevis]
gi|47125185|gb|AAH70716.1| LOC397826 protein [Xenopus laevis]
Length = 539
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+ SP
Sbjct: 306 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQDEIGSRNFFERDGQPYCEKDYHNLFSP- 363
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILD+ ++ L+RTWH + C C + F R
Sbjct: 364 ----------------RCFYCNGPILDR-VVTALDRTWHPEHFFCAQCGAFFGPEGFHER 406
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 407 DGKAYCRKDYF 417
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 54/122 (44%), Gaps = 19/122 (15%)
Query: 8 CEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRFPSG 66
C PILD+ ++ L+RTWH + C C + F R+GK +CR D+F
Sbjct: 368 CNGPILDR-VVTALDRTWHPEHFFCAQCGAFFGPEGFHERDGKAYCRKDYF--------- 417
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLF 125
C GC IL+ + ++ L WH +C C +C ++ F +G+ +
Sbjct: 418 ------DMFAPKCGGCTHAILENY-ISALNTLWHPECFVCRECFTPFINGSFFEHDGQPY 470
Query: 126 CR 127
C
Sbjct: 471 CE 472
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 52/126 (41%), Gaps = 19/126 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC IL+ ++ + L WH +C C +C ++ F +G+ +C +
Sbjct: 424 CGGCTHAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCEMHYHERRGSL 482
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 483 ---------------CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 526
Query: 123 KLFCRN 128
K +C+N
Sbjct: 527 KPYCQN 532
>gi|386782125|ref|NP_001247720.1| leupaxin [Macaca mulatta]
gi|383422963|gb|AFH34695.1| leupaxin isoform 2 [Macaca mulatta]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI K +++ L + WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCRKPIAGK-VIHALGQAWHPEHFVCTHCKEEIGSSPFFERNGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C GC +PI + ++ + +H + C C LS F +
Sbjct: 329 ---------------CHGCGQPITGR-CISAMGHKFHPEHFVCAFCLTQLSKGIFREQND 372
Query: 123 KLFCR 127
K +C+
Sbjct: 373 KTYCQ 377
>gi|4758670|ref|NP_004802.1| leupaxin isoform 2 [Homo sapiens]
gi|8134557|sp|O60711.1|LPXN_HUMAN RecName: Full=Leupaxin
gi|3126971|gb|AAC16014.1| leupaxin [Homo sapiens]
gi|17512109|gb|AAH19035.1| Leupaxin [Homo sapiens]
gi|119594214|gb|EAW73808.1| leupaxin, isoform CRA_b [Homo sapiens]
gi|123984571|gb|ABM83631.1| leupaxin [synthetic construct]
gi|123998557|gb|ABM86880.1| leupaxin [synthetic construct]
gi|189055346|dbj|BAG36111.1| unnamed protein product [Homo sapiens]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 329 CHGCGQPIT 337
>gi|417403614|gb|JAA48606.1| Putative protein kinase [Desmodus rotundus]
Length = 647
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|402893342|ref|XP_003909856.1| PREDICTED: leupaxin isoform 2 [Papio anubis]
Length = 391
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 216 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 271
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC + S F +G
Sbjct: 272 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 318
Query: 123 KLFCR 127
+ FC
Sbjct: 319 RPFCE 323
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 157 CASCRKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERNGLAYCPNDYHQLFSP- 214
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 215 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 257
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 258 DKKPYCRKDFL 268
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 275 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 333
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C GC +PI + ++ + +H + C C LS F +
Sbjct: 334 ---------------CHGCGQPITGR-CISAMGHKFHPEHFVCAFCLTQLSKGIFREQND 377
Query: 123 KLFCR 127
K +C+
Sbjct: 378 KTYCQ 382
>gi|402893340|ref|XP_003909855.1| PREDICTED: leupaxin isoform 1 [Papio anubis]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCRKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERNGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C GC +PI + ++ + +H + C C LS F +
Sbjct: 329 ---------------CHGCGQPITGR-CISAMGHKFHPEHFVCAFCLTQLSKGIFREQND 372
Query: 123 KLFCR 127
K +C+
Sbjct: 373 KTYCQ 377
>gi|348536385|ref|XP_003455677.1| PREDICTED: LIM/homeobox protein Lhx9-like isoform 3 [Oreochromis
niloticus]
Length = 320
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 67/130 (51%), Gaps = 18/130 (13%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V+
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRFSVQ 132
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ C +G+S+S ++ + + +H C C C+ TL+ D +
Sbjct: 133 RCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGMK 178
Query: 121 EGKLFCRNDF 130
+ ++CR F
Sbjct: 179 DSLVYCRLHF 188
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 127
>gi|319740961|gb|ADV69000.1| lim-homeobox 2/9 [Patiria miniata]
Length = 304
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 19/128 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC PI D++ L ++ WH +C+RC +C TL ++ CF+++G ++C+ +FR V
Sbjct: 48 CAGCGGPIQDRYYLLAADQQWHTECLRCCECKVTLDNELTCFAKDGGIYCKEHYFRRFGV 107
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + CG G+++ ++ + +H C C C L+ D
Sbjct: 108 KKCARCGTGIAAHEMV--------------MRARSLVYHLSCFTCSACSMALTTGDYYGM 153
Query: 120 REGKLFCR 127
R+ +++CR
Sbjct: 154 RDTQVYCR 161
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC PI D++ L ++ WH +C+RC +C TL ++ CF+++G ++C+ +F
Sbjct: 48 CAGCGGPIQDRYYLLAADQQWHTECLRCCECKVTLDNELTCFAKDGGIYCKEHYF 102
>gi|297688678|ref|XP_002821806.1| PREDICTED: leupaxin isoform 2 [Pongo abelii]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ + L+ ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENY-LSAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 59.7 bits (143), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 52/125 (41%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
C GC +PI + + + +H + C C LS F +
Sbjct: 329 ---------------CHGCGQPITGR-CITAMGYKFHPEHFVCAFCLTQLSKGIFREQND 372
Query: 123 KLFCR 127
K++C+
Sbjct: 373 KIYCQ 377
>gi|332634756|ref|NP_001193833.1| LIM domain kinase 1 [Bos taurus]
gi|296473062|tpg|DAA15177.1| TPA: LIM domain kinase 1 [Bos taurus]
Length = 647
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|62897891|dbj|BAD96885.1| leupaxin variant [Homo sapiens]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 58/125 (46%), Gaps = 19/125 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFCR 127
+ FC
Sbjct: 314 RPFCE 318
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ + SP
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQLFSP- 209
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
CA C PILDK +L + +TWH + C C + F +
Sbjct: 210 ----------------RCAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEK 252
Query: 121 EGKLFCRNDFF 131
+ K +CR DF
Sbjct: 253 DKKPYCRKDFL 263
Score = 38.9 bits (89), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLS 72
GCG ++
Sbjct: 329 CHGCGQPIT 337
>gi|440908467|gb|ELR58481.1| LIM domain kinase 1, partial [Bos grunniens mutus]
Length = 597
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 4 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---A 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 61 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 108
Query: 119 SREGKLFC 126
KL+C
Sbjct: 109 VEHSKLYC 116
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 1 GSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW 59
>gi|348560648|ref|XP_003466125.1| PREDICTED: LIM domain-binding protein 3-like isoform 4 [Cavia
porcellus]
Length = 612
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 495 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 546
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 547 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 597
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 598 KDKPLCK 604
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 436 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 494
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 495 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 536
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 537 DGEPYCEKDY 546
>gi|56553691|pdb|1RUT|X Chain X, Complex Of Lmo4 Lim Domains 1 And 2 With The Ldb1 Lid
Domain
Length = 188
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 60/131 (45%), Gaps = 19/131 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D +++ G + CRND+ R +
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYIR--L 65
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
SG +C+ C + I + ++ +H C C C + L D+
Sbjct: 66 FGNSG-----------ACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 114
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 115 YINGSLFCEHD 125
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFF 131
CAGC I D+FLL ++ WH+ C++C C L D +++ G + CRND+
Sbjct: 8 CAGCGGKIADRFLLYAMDSYWHSRCLKCSSCQAQLGDIGTSSYTKSGMILCRNDYI 63
>gi|328781883|ref|XP_396576.4| PREDICTED: hypothetical protein LOC413125, partial [Apis mellifera]
Length = 417
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 19/132 (14%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I++++LL ++R WH C++C C L++ C++R G + C++D+ R
Sbjct: 193 CAGCGGQIVERWLLLAMDRYWHNGCLKCSYCGAALAEIGHSCYTRSGMILCKSDYRRM-- 250
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S +CAGC I + ++ +H C C C + L D+ +
Sbjct: 251 -------FGSSG----ACAGCGNAIPATELVMRAGGSVFHQKCFTCSKCGNQLVSGDRYY 299
Query: 119 SREGKLFCRNDF 130
G C D+
Sbjct: 300 LLSGSPVCETDW 311
>gi|297263666|ref|XP_001085795.2| PREDICTED: paxillin [Macaca mulatta]
Length = 659
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 485 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 540
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 541 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 587
Query: 123 KLFC 126
+ +C
Sbjct: 588 QPYC 591
Score = 58.2 bits (139), Expect = 1e-06, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + + + WH + C C + S F R+G+ +C D+ SP
Sbjct: 426 CGACKKPIAGQVMRGS-GQGWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHNLFSP- 483
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 484 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 526
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 527 DGKAYCRKDYF 537
>gi|224052298|ref|XP_002190242.1| PREDICTED: LIM domain-binding protein 3 [Taeniopygia guttata]
Length = 616
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 21/128 (16%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 498 TCARCHTKIMGE-VMHALRQTWHTSCFVCAACKKPFGNSLFHMEDGEPYCEKDY------ 550
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
+ L S+ C GC+ P+ DKF+ L TWH C C CH L + F S
Sbjct: 551 ------IALFST---KCHGCDYPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYS 600
Query: 120 REGKLFCR 127
++ K C+
Sbjct: 601 KKDKPLCK 608
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P
Sbjct: 440 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADMCFVEEQNSVYCERCYEQFFAP- 497
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
+CA C I+ + +++ L +TWH C C C + F E
Sbjct: 498 ----------------TCARCHTKIMGE-VMHALRQTWHTSCFVCAACKKPFGNSLFHME 540
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 541 DGEPYCEKDY 550
>gi|193783717|dbj|BAG53822.1| unnamed protein product [Homo sapiens]
Length = 589
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFR--SPV 61
C C+KPI + ++ + +TWH + C C + S F R+G+ +C + SP
Sbjct: 356 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKAYHNLFSP- 413
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
C C PILDK ++ L+RTWH + C C + F +
Sbjct: 414 ----------------RCYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEK 456
Query: 121 EGKLFCRNDFF 131
+GK +CR D+F
Sbjct: 457 DGKAYCRKDYF 467
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 37/124 (29%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 415 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFD---MF 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREG 122
CG GC + IL+ + ++ L WH +C C +C + F +G
Sbjct: 471 APKCG------------GCARAILENY-ISALNTLWHPECFVCRECFTPFVNGSFFEHDG 517
Query: 123 KLFC 126
+ +C
Sbjct: 518 QPYC 521
>gi|348560654|ref|XP_003466128.1| PREDICTED: LIM domain-binding protein 3-like isoform 7 [Cavia
porcellus]
Length = 607
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 490 CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHMEDGEPYCEKDY------- 541
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 542 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 592
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 593 KDKPLCK 599
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 431 CGHCNSVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPM 489
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 490 -----------------CAKCHAKIMGE-VMHALRQTWHTTCFVCSACKKPFGNSLFHME 531
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 532 DGEPYCEKDY 541
>gi|301769431|ref|XP_002920134.1| PREDICTED: LIM domain kinase 1-like [Ailuropoda melanoleuca]
Length = 845
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 57/128 (44%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 226 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKRDYW---A 282
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + D
Sbjct: 283 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTL 330
Query: 119 SREGKLFC 126
KL+C
Sbjct: 331 VEHSKLYC 338
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 58 RSPVRFPSGCG-VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK 116
+ P F G +G S L CA C + I D L L WHADC RC +C +LS +
Sbjct: 207 KPPKPFGGALGALGFQGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQ 266
Query: 117 CFSREGKLFCRNDFF 131
+ ++G+LFC+ D++
Sbjct: 267 YYEKDGQLFCKRDYW 281
>gi|6754548|ref|NP_034847.1| LIM domain kinase 1 [Mus musculus]
gi|1708821|sp|P53668.1|LIMK1_MOUSE RecName: Full=LIM domain kinase 1; Short=LIMK-1; AltName:
Full=KIZ-1
gi|4972949|gb|AAD34858.1|AF139987_1 LIM-kinase1 [Mus musculus]
gi|9800518|gb|AAF99334.1|AF289665_1 LIMK1 [Mus musculus]
gi|1051160|emb|CAA60377.1| mLimk1 [Mus musculus]
gi|148687470|gb|EDL19417.1| LIM-domain containing, protein kinase [Mus musculus]
gi|162317928|gb|AAI56779.1| LIM-domain containing, protein kinase [synthetic construct]
Length = 647
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|326925972|ref|XP_003209180.1| PREDICTED: lipoma-preferred partner homolog [Meleagris gallopavo]
Length = 604
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 28/138 (20%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRS 59
L C+ C KPI+++ +L + +H C C CH +L F+ + G + C DF +
Sbjct: 465 LEQCSVCAKPIMER-ILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGNIHCIEDFHK- 522
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPIL------DKFLLNVLERTWHADCVRCYDCHHTL 113
+F C V C++PI+ + + L+R +H C RC DC L
Sbjct: 523 --KFAPRCSV------------CKEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGGLL 568
Query: 114 SD----KCFSREGKLFCR 127
S+ C+ +G + C+
Sbjct: 569 SEGDNQGCYPLDGHILCK 586
>gi|74202526|dbj|BAE24841.1| unnamed protein product [Mus musculus]
Length = 647
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 58/128 (45%), Gaps = 18/128 (14%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++
Sbjct: 22 LPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYW---A 78
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CF 118
R+ SC GC + I ++ E +H +C C C + + D
Sbjct: 79 RYGE------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTL 126
Query: 119 SREGKLFC 126
KL+C
Sbjct: 127 VEHSKLYC 134
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>gi|345487720|ref|XP_003425744.1| PREDICTED: LIM domain kinase 1-like isoform 2 [Nasonia vitripennis]
Length = 1112
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/126 (27%), Positives = 55/126 (43%), Gaps = 19/126 (15%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF 63
+CAGC I + + L + WH DC RC C LS F ++G LFC++D++ +
Sbjct: 28 ACAGCLNGIDEDEFIQALGQEWHVDCFRCSACDAALSSWYFEKDGLLFCKDDYWAAYGEA 87
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSR 120
GCG ++ +++ AG K +H +C C C + D
Sbjct: 88 CQGCGHVITGPVML--AGDHK--------------FHPECFACNSCGTFIGDGESYALVE 131
Query: 121 EGKLFC 126
KL+C
Sbjct: 132 RSKLYC 137
Score = 53.1 bits (126), Expect = 4e-05, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
+CAGC I + + L + WH DC RC C LS F ++G LFC++D++
Sbjct: 28 ACAGCLNGIDEDEFIQALGQEWHVDCFRCSACDAALSSWYFEKDGLLFCKDDYW 81
>gi|307198578|gb|EFN79448.1| Wilms tumor protein 1-interacting protein-like protein
[Harpegnathos saltator]
Length = 912
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 16/129 (12%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRSPVR 62
CA C I++ +L + +++H C RC C+ L F+ + K++C ND+ R
Sbjct: 768 CAICGHLIME-MILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 826
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD----KCF 118
+ CG G++ G E+ + + +++ +H DC C DC L+D +C+
Sbjct: 827 KCASCGKGITP-----VEGTEETVR----VVSMDKDFHVDCYVCEDCGMQLTDEPDKRCY 877
Query: 119 SREGKLFCR 127
+G+L CR
Sbjct: 878 PLDGRLMCR 886
>gi|395501161|ref|XP_003754966.1| PREDICTED: LOW QUALITY PROTEIN: LIM domain-binding protein 3
[Sarcophilus harrisii]
Length = 769
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 652 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDY------- 703
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
+ L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 704 -----INLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 754
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 755 KDKPLCK 761
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 593 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPL 651
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 652 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHME 693
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 694 DGEPYCEKDY 703
>gi|334313610|ref|XP_003339934.1| PREDICTED: LIM domain-binding protein 3 [Monodelphis domestica]
Length = 747
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 630 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDY------- 681
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
+ L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 682 -----INLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 732
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 733 KDKPLCK 739
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 571 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPL 629
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 630 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHME 671
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 672 DGEPYCEKDY 681
>gi|321452370|gb|EFX63769.1| hypothetical protein DAPPUDRAFT_306277 [Daphnia pulex]
Length = 204
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 23/131 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRNDFFR--SPV 61
C CEKPI+ + ++ L RTWH + C C L + F R+G+ +C D+ SP
Sbjct: 22 CTACEKPIVGQ-VVTALGRTWHPEHFVCSHCRQELGTQNFFERDGQPYCEPDYHHLFSP- 79
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-R 120
CA C PILDK + L++TWH D C C + F +
Sbjct: 80 ----------------RCAYCNGPILDK-CVTALDQTWHPDHFFCTQCGCQFGEDGFQEK 122
Query: 121 EGKLFCRNDFF 131
+GK +C+ D+
Sbjct: 123 DGKPYCKEDYL 133
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 33/115 (28%), Positives = 51/115 (44%), Gaps = 18/115 (15%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRF 63
CA C PILDK + L++TWH D C C + F ++GK +C+ D+
Sbjct: 81 CAYCNGPILDK-CVTALDQTWHPDHFFCTQCGCQFGEDGFQEKDGKPYCKEDYL------ 133
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF 118
+ + C GC I + ++ + L WH +C C DC +L+ F
Sbjct: 134 ---------AMFALKCKGCSTAITEGYI-SALNGQWHPNCFVCRDCRVSLNGGSF 178
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC-FSREGKLFCRN 128
G+S++ C CEKPI+ + ++ L RTWH + C C L + F R+G+ +C
Sbjct: 13 GISATTKGCCTACEKPIVGQ-VVTALGRTWHPEHFVCSHCRQELGTQNFFERDGQPYCEP 71
Query: 129 DF 130
D+
Sbjct: 72 DY 73
>gi|126272206|ref|XP_001363364.1| PREDICTED: LIM domain-binding protein 3 isoform 2 [Monodelphis
domestica]
Length = 622
Score = 60.1 bits (144), Expect = 3e-07, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 57/127 (44%), Gaps = 21/127 (16%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 505 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHMEDGEPYCEKDY------- 556
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
+ L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 557 -----INLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 607
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 608 KDKPLCK 614
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 23/130 (17%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 446 CGHCNSIIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQNNVYCERCYEQFFAPL 504
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 505 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACRKPFGNSLFHME 546
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 547 DGEPYCEKDY 556
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.332 0.144 0.517
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,068,583,061
Number of Sequences: 23463169
Number of extensions: 77737618
Number of successful extensions: 224929
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 2092
Number of HSP's successfully gapped in prelim test: 3333
Number of HSP's that attempted gapping in prelim test: 208201
Number of HSP's gapped (non-prelim): 12601
length of query: 131
length of database: 8,064,228,071
effective HSP length: 97
effective length of query: 34
effective length of database: 10,083,267,974
effective search space: 342831111116
effective search space used: 342831111116
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 71 (32.0 bits)