Your job contains 1 sequence.
>psy4437
MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP
VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR
EGKLFCRNDFF
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4437
(131 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0026411 - symbol:Lim1 species:7227 "Drosophila mel... 293 2.1e-25 1
UNIPROTKB|A6QQY6 - symbol:LHX5 "Uncharacterized protein" ... 284 5.9e-25 1
UNIPROTKB|E2RRP3 - symbol:LHX5 "Uncharacterized protein" ... 284 5.9e-25 1
UNIPROTKB|Q9H2C1 - symbol:LHX5 "LIM/homeobox protein Lhx5... 284 5.9e-25 1
MGI|MGI:107792 - symbol:Lhx5 "LIM homeobox protein 5" spe... 284 5.9e-25 1
RGD|71079 - symbol:Lhx5 "LIM homeobox 5" species:10116 "R... 284 5.9e-25 1
UNIPROTKB|F1RKD0 - symbol:LHX5 "Uncharacterized protein" ... 277 3.3e-24 1
UNIPROTKB|B7ZP59 - symbol:lhx1 "Homeobox protein" species... 275 5.3e-24 1
UNIPROTKB|P29674 - symbol:lhx1 "LIM/homeobox protein Lhx1... 275 5.3e-24 1
ZFIN|ZDB-GENE-980526-347 - symbol:lhx1a "LIM homeobox 1a"... 275 5.3e-24 1
ZFIN|ZDB-GENE-980526-484 - symbol:lhx5 "LIM homeobox 5" s... 272 1.1e-23 1
ZFIN|ZDB-GENE-980526-116 - symbol:lhx1b "LIM homeobox 1b"... 271 1.4e-23 1
UNIPROTKB|P37137 - symbol:lhx5 "LIM/homeobox protein Lhx5... 270 1.9e-23 1
UNIPROTKB|F1NX79 - symbol:LHX1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
UNIPROTKB|P53411 - symbol:LHX1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
UNIPROTKB|A7Z015 - symbol:LHX1 "Uncharacterized protein" ... 268 3.7e-23 1
UNIPROTKB|E2RMA8 - symbol:LHX1 "Uncharacterized protein" ... 268 3.7e-23 1
UNIPROTKB|P48742 - symbol:LHX1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
UNIPROTKB|F2Z531 - symbol:LHX1 "Uncharacterized protein" ... 268 3.7e-23 1
UNIPROTKB|P63008 - symbol:Lhx1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
UNIPROTKB|Q5IS44 - symbol:LHX1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
UNIPROTKB|Q5IS89 - symbol:LHX1 "LIM/homeobox protein Lhx1... 268 3.7e-23 1
MGI|MGI:99783 - symbol:Lhx1 "LIM homeobox protein 1" spec... 268 3.7e-23 1
RGD|71074 - symbol:Lhx1 "LIM homeobox 1" species:10116 "R... 268 3.7e-23 1
UNIPROTKB|Q5ISK2 - symbol:Q5ISK2 "LIM homeobox protein 1"... 264 1.1e-22 1
UNIPROTKB|E1BQX0 - symbol:LHX5 "Uncharacterized protein" ... 263 1.3e-22 1
FB|FBgn0002023 - symbol:Lim3 "Lim3" species:7227 "Drosoph... 252 7.9e-21 1
ZFIN|ZDB-GENE-060728-1 - symbol:lhx4 "LIM homeobox 4" spe... 238 9.1e-20 1
UNIPROTKB|F1S681 - symbol:LHX4 "Uncharacterized protein" ... 226 1.5e-18 1
UNIPROTKB|F1MFM7 - symbol:LHX4 "Uncharacterized protein" ... 226 2.1e-18 1
UNIPROTKB|Q969G2 - symbol:LHX4 "LIM/homeobox protein Lhx4... 226 2.1e-18 1
MGI|MGI:101776 - symbol:Lhx4 "LIM homeobox protein 4" spe... 226 2.1e-18 1
UNIPROTKB|F1PCI5 - symbol:LHX4 "Uncharacterized protein" ... 226 2.2e-18 1
UNIPROTKB|H9L2C7 - symbol:LHX4 "Uncharacterized protein" ... 217 7.5e-18 1
UNIPROTKB|Q8UVR3 - symbol:lmx1b.1 "LIM homeobox transcrip... 212 8.5e-17 1
UNIPROTKB|P53413 - symbol:LMX1B "LIM/homeobox protein LMX... 210 1.1e-16 1
UNIPROTKB|O97581 - symbol:LHX3 "LIM/homeobox protein Lhx3... 210 1.2e-16 1
MGI|MGI:1100513 - symbol:Lmx1b "LIM homeobox transcriptio... 209 1.4e-16 1
UNIPROTKB|G3V877 - symbol:Lmx1b "LIM homeobox transcripti... 209 1.4e-16 1
ZFIN|ZDB-GENE-980526-131 - symbol:lhx3 "LIM homeobox 3" s... 210 1.4e-16 1
UNIPROTKB|O60663 - symbol:LMX1B "LIM homeobox transcripti... 209 1.5e-16 1
UNIPROTKB|B7ZLH2 - symbol:LMX1B "LMX1B protein" species:9... 209 1.6e-16 1
UNIPROTKB|F8VYP0 - symbol:LMX1B "LIM homeobox transcripti... 209 1.7e-16 1
UNIPROTKB|F8W7W6 - symbol:LMX1B "LIM homeobox transcripti... 209 1.9e-16 1
ZFIN|ZDB-GENE-050114-2 - symbol:lmx1bb "LIM homeobox tran... 207 2.4e-16 1
UNIPROTKB|F6QGM2 - symbol:LHX3 "LIM/homeobox protein Lhx3... 202 2.9e-16 1
UNIPROTKB|P36200 - symbol:lhx3 "LIM/homeobox protein Lhx3... 207 2.9e-16 1
UNIPROTKB|Q9UBR4 - symbol:LHX3 "LIM/homeobox protein Lhx3... 207 3.0e-16 1
UNIPROTKB|E2QZZ9 - symbol:LHX3 "Uncharacterized protein" ... 207 3.0e-16 1
UNIPROTKB|Q2TEA4 - symbol:Lhx3 "LIM homeodomain 3 protein... 207 3.1e-16 1
UNIPROTKB|L7N0D8 - symbol:LHX3 "Uncharacterized protein" ... 207 3.1e-16 1
MGI|MGI:102673 - symbol:Lhx3 "LIM homeobox protein 3" spe... 206 3.9e-16 1
UNIPROTKB|G3V8E3 - symbol:Lhx3 "Protein Lhx3" species:101... 206 3.9e-16 1
UNIPROTKB|G3V9E7 - symbol:Lhx3 "RCG45383, isoform CRA_b" ... 206 4.0e-16 1
WB|WBGene00003000 - symbol:lin-11 species:6239 "Caenorhab... 206 4.1e-16 1
UNIPROTKB|F1NDZ5 - symbol:LMX1B "LIM/homeobox protein LMX... 203 6.9e-16 1
ZFIN|ZDB-GENE-050114-3 - symbol:lmx1ba "LIM homeobox tran... 202 8.8e-16 1
UNIPROTKB|P53412 - symbol:LHX3 "LIM/homeobox protein Lhx3... 202 1.1e-15 1
ZFIN|ZDB-GENE-040624-1 - symbol:isl1l "islet1, like" spec... 194 3.7e-15 1
UNIPROTKB|Q68EY3 - symbol:lhx9 "LIM/homeobox protein Lhx9... 192 7.0e-15 1
UNIPROTKB|Q8TE12 - symbol:LMX1A "LIM homeobox transcripti... 194 7.3e-15 1
FB|FBgn0051988 - symbol:CG31988 species:7227 "Drosophila ... 184 2.3e-14 1
UNIPROTKB|F1MC25 - symbol:LMX1A "Uncharacterized protein"... 188 3.4e-14 1
UNIPROTKB|F1PDJ1 - symbol:LMX1A "Uncharacterized protein"... 188 3.4e-14 1
FB|FBgn0036274 - symbol:CG4328 species:7227 "Drosophila m... 189 6.0e-14 1
WB|WBGene00002987 - symbol:lim-4 species:6239 "Caenorhabd... 182 1.2e-13 1
UNIPROTKB|D6RBJ1 - symbol:ISL1 "Insulin gene enhancer pro... 180 1.5e-13 1
UNIPROTKB|A6H796 - symbol:ISL1 "ISL1 protein" species:991... 180 2.0e-13 1
UNIPROTKB|P61371 - symbol:ISL1 "Insulin gene enhancer pro... 180 2.0e-13 1
MGI|MGI:101791 - symbol:Isl1 "ISL1 transcription factor, ... 180 2.0e-13 1
RGD|61957 - symbol:Isl1 "ISL LIM homeobox 1" species:1011... 180 2.0e-13 1
ZFIN|ZDB-GENE-980526-112 - symbol:isl1 "islet1" species:7... 180 2.0e-13 1
MGI|MGI:1888519 - symbol:Lmx1a "LIM homeobox transcriptio... 181 2.0e-13 1
RGD|1304784 - symbol:Lmx1a "LIM homeobox transcription fa... 181 2.0e-13 1
UNIPROTKB|F1PP21 - symbol:ISL1 "Uncharacterized protein" ... 180 2.2e-13 1
UNIPROTKB|F1SMF7 - symbol:ISL1 "Uncharacterized protein" ... 180 2.2e-13 1
UNIPROTKB|P50211 - symbol:ISL1 "Insulin gene enhancer pro... 178 3.3e-13 1
FB|FBgn0000099 - symbol:ap "apterous" species:7227 "Droso... 181 3.3e-13 1
UNIPROTKB|H0YKY2 - symbol:ISL2 "Insulin gene enhancer pro... 172 4.4e-13 1
FB|FBgn0050178 - symbol:CG30178 species:7227 "Drosophila ... 172 4.4e-13 1
UNIPROTKB|Q9YH16 - symbol:lmo3 "LIM domain only protein 3... 172 4.4e-13 1
ZFIN|ZDB-GENE-050522-201 - symbol:lmo3 "LIM domain only 3... 172 4.4e-13 1
UNIPROTKB|A2I8Z7 - symbol:lhx9 "LIM/homeobox protein Lhx9... 177 5.3e-13 1
ZFIN|ZDB-GENE-010702-1 - symbol:lmo4a "LIM domain only 4a... 171 5.6e-13 1
UNIPROTKB|Q5FVB2 - symbol:lmo4.1 "LIM domain transcriptio... 171 5.6e-13 1
UNIPROTKB|E1BYB0 - symbol:LMO4 "Uncharacterized protein" ... 171 5.6e-13 1
UNIPROTKB|F1P113 - symbol:LMO4 "Uncharacterized protein" ... 171 5.6e-13 1
UNIPROTKB|Q3SWZ8 - symbol:LMO4 "LIM domain transcription ... 171 5.6e-13 1
UNIPROTKB|E2QSI3 - symbol:LMO4 "Uncharacterized protein" ... 171 5.6e-13 1
UNIPROTKB|P61968 - symbol:LMO4 "LIM domain transcription ... 171 5.6e-13 1
UNIPROTKB|A9ED91 - symbol:LMO4 "LIM domain only 4" specie... 171 5.6e-13 1
MGI|MGI:109360 - symbol:Lmo4 "LIM domain only 4" species:... 171 5.6e-13 1
RGD|1305670 - symbol:Lmo4 "LIM domain only 4" species:101... 171 5.6e-13 1
FB|FBgn0051624 - symbol:CG31624 species:7227 "Drosophila ... 170 7.1e-13 1
UNIPROTKB|F1NBH3 - symbol:LMO3 "Uncharacterized protein" ... 169 9.1e-13 1
UNIPROTKB|Q2KIA3 - symbol:LMO3 "LIM domain only protein 3... 169 9.1e-13 1
UNIPROTKB|E2RHK8 - symbol:LMO3 "Uncharacterized protein" ... 169 9.1e-13 1
UNIPROTKB|J9NZN8 - symbol:LMO3 "Uncharacterized protein" ... 169 9.1e-13 1
UNIPROTKB|J9P4K0 - symbol:LMO3 "Uncharacterized protein" ... 169 9.1e-13 1
UNIPROTKB|B4DG90 - symbol:LMO3 "LIM domain only protein 3... 169 9.1e-13 1
WARNING: Descriptions of 532 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0026411 [details] [associations]
symbol:Lim1 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005525
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007480 GO:GO:0007479 FlyBase:FBgn0260444
HSSP:P06601 GeneTree:ENSGT00700000104177 eggNOG:NOG257130 KO:K09372
EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 UniGene:Dm.3025
SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:Q9V472
EnsemblMetazoa:FBtr0071279 GeneID:31813 KEGG:dme:Dmel_CG11354
UCSC:CG11354-RA CTD:31813 FlyBase:FBgn0026411 InParanoid:Q9V472
OMA:GARKMRG OrthoDB:EOG48W9H7 GenomeRNAi:31813 NextBio:775444
Uniprot:Q9V472
Length = 505
Score = 293 (108.2 bits), Expect = 2.1e-25, P = 2.1e-25
Identities = 61/129 (47%), Positives = 78/129 (60%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFFR
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE- 121
SGCG G++ S L+ KP ++ +H +C C C LS ++ + +
Sbjct: 87 SGCGQGIAPSDLV-----RKP---------RDKVFHLNCFTCCICRKQLSTGEQLYVLDD 132
Query: 122 GKLFCRNDF 130
K C++D+
Sbjct: 133 NKFICKDDY 141
Score = 247 (92.0 bits), Expect = 2.5e-20, P = 2.5e-20
Identities = 42/53 (79%), Positives = 45/53 (84%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC KPILDKFLLNVLER WHA CVRC +C L+DKCFSRE KL+CRNDFF
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFF 79
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 106 YVIDENKFVCKDDY 119
Score = 245 (91.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 106 YVIDENKFVCKDDY 119
Score = 245 (91.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 106 YVIDENKFVCKDDY 119
Score = 245 (91.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 106 YVIDENKFVCKDDY 119
Score = 245 (91.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 284 (105.0 bits), Expect = 5.9e-25, P = 5.9e-25
Identities = 58/134 (43%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 106 YVIDENKFVCKDDY 119
Score = 245 (91.3 bits), Expect = 1.7e-20, P = 1.7e-20
Identities = 39/57 (68%), Positives = 49/57 (85%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSREGKLYCKNDFF 57
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 277 (102.6 bits), Expect = 3.3e-24, P = 3.3e-24
Identities = 58/134 (43%), Positives = 82/134 (61%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C + LS+KCFSREGKL+C+NDFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECTN-LSEKCFSREGKLYCKNDFFR-- 57
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 58 -RFGT------------KCAGCAQGISPSDLVRKARSKVFHLNCFTCMVCNKQLSTGEEL 104
Query: 118 FS-REGKLFCRNDF 130
+ E K C++D+
Sbjct: 105 YVIDENKFVCKDDY 118
Score = 238 (88.8 bits), Expect = 1.0e-19, P = 1.0e-19
Identities = 39/57 (68%), Positives = 50/57 (87%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C + LS+KCFSREGKL+C+NDFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECTN-LSEKCFSREGKLYCKNDFF 56
>UNIPROTKB|B7ZP59 [details] [associations]
symbol:lhx1 "Homeobox protein" species:8355 "Xenopus
laevis" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0072178 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077
RefSeq:NP_001084128.1 UniGene:Xl.32655 GeneID:399323
KEGG:xla:399323 Xenbase:XB-GENE-856460 EMBL:BC169338 EMBL:BC169340
SMR:B7ZP59 Uniprot:B7ZP59
Length = 403
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/133 (42%), Positives = 79/133 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKCF 118
RF + CAGC + I L+ + +H +C C C+ LS ++ +
Sbjct: 58 RFGT------------KCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 119 S-REGKLFCRNDF 130
E K C+ D+
Sbjct: 106 IIDENKFVCKEDY 118
Score = 237 (88.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|P29674 [details] [associations]
symbol:lhx1 "LIM/homeobox protein Lhx1" species:8355
"Xenopus laevis" [GO:0003002 "regionalization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009798 "axis specification" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0030903 "notochord
development" evidence=IMP] [GO:0035565 "regulation of pronephros
size" evidence=IGI] [GO:0039003 "pronephric field specification"
evidence=IGI] [GO:0039020 "pronephric nephron tubule development"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043009 "chordate embryonic development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0048793 "pronephros development" evidence=IGI;IMP] [GO:0072080
"nephron tubule development" evidence=IGI] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0022008 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0042074 GO:GO:0009798 GO:GO:0043009
GO:GO:0030903 GO:GO:0039020 GO:GO:0035565 CTD:3975
HOVERGEN:HBG006263 KO:K09372 EMBL:X63889 EMBL:AF013242 PIR:S23802
RefSeq:NP_001084128.1 UniGene:Xl.32655 ProteinModelPortal:P29674
SMR:P29674 GeneID:399323 KEGG:xla:399323 Xenbase:XB-GENE-856460
GO:GO:0039003 Uniprot:P29674
Length = 403
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/133 (42%), Positives = 79/133 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKCF 118
RF + CAGC + I L+ + +H +C C C+ LS ++ +
Sbjct: 58 RFGT------------KCAGCAQGISPSDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 119 S-REGKLFCRNDF 130
E K C+ D+
Sbjct: 106 IIDENKFVCKEDY 118
Score = 237 (88.5 bits), Expect = 1.4e-19, P = 1.4e-19
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>ZFIN|ZDB-GENE-980526-347 [details] [associations]
symbol:lhx1a "LIM homeobox 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0043234
"protein complex" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0060059 "embryonic
retina morphogenesis in camera-type eye" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072178
"nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive
streak formation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0021871 "forebrain regionalization"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-347 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 EMBL:L37802 IPI:IPI00485723 RefSeq:NP_571291.1
UniGene:Dr.364 ProteinModelPortal:Q90476 SMR:Q90476 STRING:Q90476
Ensembl:ENSDART00000005641 GeneID:30463 KEGG:dre:30463 CTD:30463
InParanoid:Q90476 OMA:PSEMNEG NextBio:20806857 ArrayExpress:Q90476
Bgee:Q90476 Uniprot:Q90476
Length = 405
Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
Identities = 56/133 (42%), Positives = 80/133 (60%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFFR--- 57
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKCF 118
RF + CAGC + I L+ + +H +C C C+ LS ++ +
Sbjct: 58 RFGT------------KCAGCAQGISPNDLVRRARSKVFHLNCFTCMMCNKQLSTGEELY 105
Query: 119 S-REGKLFCRNDF 130
E K C++D+
Sbjct: 106 IIDENKFVCKDDY 118
Score = 236 (88.1 bits), Expect = 1.8e-19, P = 1.8e-19
Identities = 37/56 (66%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>ZFIN|ZDB-GENE-980526-484 [details] [associations]
symbol:lhx5 "LIM homeobox 5" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP;IDA] [GO:0001654 "eye development" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-484 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001654
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F EMBL:L42547
EMBL:BC098523 IPI:IPI00509409 RefSeq:NP_571293.1 UniGene:Dr.75068
ProteinModelPortal:P52889 SMR:P52889 STRING:P52889
Ensembl:ENSDART00000080693 GeneID:30465 KEGG:dre:30465 CTD:64211
InParanoid:P52889 OMA:SHQGQEM NextBio:20806859 Bgee:P52889
Uniprot:P52889
Length = 399
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 56/134 (41%), Positives = 81/134 (60%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C+ L++KCFSR+GKL+C+ DFFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCLQGISPSDLVRRARSKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C+ D+
Sbjct: 106 YVIDENKFVCKEDY 119
Score = 236 (88.1 bits), Expect = 1.7e-19, P = 1.7e-19
Identities = 37/57 (64%), Positives = 50/57 (87%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WHA CV+C +C+ L++KCFSR+GKL+C+ DFF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRDGKLYCKIDFF 57
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 271 (100.5 bits), Expect = 1.4e-23, P = 1.4e-23
Identities = 55/132 (41%), Positives = 79/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGCE+PILD+FLL+VL+R WHA CV+C DC +L+D+CFSREG+L+C+NDFFR
Sbjct: 1 MVHCAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSREGRLYCKNDFFRRYG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCGGCAQGISPSDLVRKAR--------------SKVFHLNCFTCIMCNKQLSTGEELYI 106
Query: 120 R-EGKLFCRNDF 130
E K C+ D+
Sbjct: 107 LDEYKFVCKEDY 118
Score = 239 (89.2 bits), Expect = 8.1e-20, P = 8.1e-20
Identities = 37/56 (66%), Positives = 50/56 (89%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGCE+PILD+FLL+VL+R WHA CV+C DC +L+D+CFSREG+L+C+NDFF
Sbjct: 1 MVHCAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSREGRLYCKNDFF 56
>UNIPROTKB|P37137 [details] [associations]
symbol:lhx5 "LIM/homeobox protein Lhx5" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 KO:K09372 CTD:64211 EMBL:L42546 EMBL:BC084744
EMBL:Z11587 PIR:S23803 RefSeq:NP_001084038.1 UniGene:Xl.1047
ProteinModelPortal:P37137 SMR:P37137 GeneID:399270 KEGG:xla:399270
Xenbase:XB-GENE-865965 Uniprot:P37137
Length = 402
Score = 270 (100.1 bits), Expect = 1.9e-23, P = 1.9e-23
Identities = 55/133 (41%), Positives = 78/133 (58%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+ DFFR
Sbjct: 1 MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFFRRF 60
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
+GC +G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 GTKCAGCSLGISPSDLVRKAR--------------NKVFHLNCFTCMVCNKQLSTGEELY 106
Query: 119 S-REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IIDENKFVCKEDY 119
Score = 232 (86.7 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 37/57 (64%), Positives = 47/57 (82%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M+ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+ DFF
Sbjct: 1 MMAHCAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKTDFF 57
>UNIPROTKB|F1NX79 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001706 "endoderm formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021871 "forebrain
regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0035852 "horizontal cell localization" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0060067 "cervix development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0006366
GO:GO:0090190 GO:GO:0040019 GO:GO:2000768 GO:GO:2000543
GeneTree:ENSGT00700000104177 IPI:IPI00581331 GO:GO:0021937
GO:GO:2000744 OMA:PSEMNEG EMBL:AADN02025742 EMBL:AADN02025743
EMBL:AADN02025744 Ensembl:ENSGALT00000008686 Uniprot:F1NX79
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|P53411 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS;NAS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009948 "anterior/posterior axis specification" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0072049 "comma-shaped body morphogenesis" evidence=ISS]
[GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0021517 "ventral spinal cord development"
evidence=IEP] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0060429 "epithelium
development" evidence=ISS] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEP] [GO:0008045 "motor neuron axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0010468 "regulation
of gene expression" evidence=ISS] [GO:0021527 "spinal cord
association neuron differentiation" evidence=ISS] [GO:0072179
"nephric duct formation" evidence=NAS] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=NAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 EMBL:L35569
IPI:IPI00581331 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789
ProteinModelPortal:P53411 SMR:P53411 STRING:P53411 GeneID:396381
KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 OrthoDB:EOG405S1F
NextBio:20816423 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 Uniprot:P53411
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|A7Z015 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008045 "motor neuron axon guidance" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0021937 "cerebellar
Purkinje cell-granule cell precursor cell signaling involved in
regulation of granule cell precursor cell proliferation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0007267
"cell-cell signaling" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0001702 "gastrulation with
mouth forming second" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=ISS] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0035852 "horizontal cell localization"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0001657
GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537
GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:0048793
GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0001071
GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:DAAA02048434 EMBL:BC153212 IPI:IPI00711186
RefSeq:NP_001098917.1 RefSeq:XP_003583582.1 UniGene:Bt.104440
Ensembl:ENSBTAT00000047689 GeneID:616699 GeneID:786041
KEGG:bta:616699 KEGG:bta:786041 InParanoid:A7Z015 NextBio:20927654
Uniprot:A7Z015
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|E2RMA8 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060429 "epithelium development"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0009880
"embryonic pattern specification" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0040019
"positive regulation of embryonic development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0007267 "cell-cell signaling"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA]
[GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA]
[GO:0048793 "pronephros development" evidence=IEA] [GO:0035852
"horizontal cell localization" evidence=IEA] [GO:0035849 "nephric
duct elongation" evidence=IEA] [GO:0032525 "somite rostral/caudal
axis specification" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190
GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880
GO:GO:0001658 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852 GO:GO:0072283
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:AAEX03006612
RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8
Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649
NextBio:20895890 Uniprot:E2RMA8
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|P48742 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0035502 "metanephric part of
ureteric bud development" evidence=IEA] [GO:0035849 "nephric duct
elongation" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA] [GO:0048793
"pronephros development" evidence=IEA] [GO:0072177 "mesonephric
duct development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072278 "metanephric comma-shaped
body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal
vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric
S-shaped body morphogenesis" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001655 "urogenital system development" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:0072077 "renal vesicle morphogenesis"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0060429 "epithelium development"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG EMBL:U14755 EMBL:AC023315
EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 IPI:IPI00550117
PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727
ProteinModelPortal:P48742 SMR:P48742 STRING:P48742
PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742
DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975
UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770
MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742
PhylomeDB:P48742 GenomeRNAi:3975 NextBio:15580 ArrayExpress:P48742
Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742
GermOnline:ENSG00000132130 GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 Uniprot:P48742
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|F2Z531 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000543 "positive regulation of
gastrulation" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] [GO:0060322 "head
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060067 "cervix development" evidence=IEA]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0035849 "nephric duct elongation"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0045892 GO:GO:0001764 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:CU929499 RefSeq:XP_003131754.1 UniGene:Ssc.22980
ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256
GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|P63008 [details] [associations]
symbol:Lhx1 "LIM/homeobox protein Lhx1" species:10036
"Mesocricetus auratus" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:X81407 PIR:I48186
ProteinModelPortal:P63008 SMR:P63008 Uniprot:P63008
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|Q5IS44 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan
troglodytes" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665284 RefSeq:NP_001029088.1
UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600
KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|Q5IS89 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432
"Saimiri boliviensis boliviensis" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665239 RefSeq:XP_003929119.1
ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157
Uniprot:Q5IS89
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>MGI|MGI:99783 [details] [associations]
symbol:Lhx1 "LIM homeobox protein 1" species:10090 "Mus
musculus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IGI;IMP] [GO:0001655 "urogenital system
development" evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001705 "ectoderm formation" evidence=IGI]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0001822 "kidney development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007267 "cell-cell
signaling" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009880
"embryonic pattern specification" evidence=IGI] [GO:0009948
"anterior/posterior axis specification" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0021527
"spinal cord association neuron differentiation" evidence=IGI]
[GO:0021549 "cerebellum development" evidence=IGI] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IGI]
[GO:0021871 "forebrain regionalization" evidence=IGI] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IMP] [GO:0035846 "oviduct epithelium
development" evidence=IMP] [GO:0035847 "uterine epithelium
development" evidence=IMP] [GO:0035849 "nephric duct elongation"
evidence=IMP] [GO:0035852 "horizontal cell localization"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IGI;IMP] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IMP] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0060065 "uterus development" evidence=IMP] [GO:0060066 "oviduct
development" evidence=IMP] [GO:0060067 "cervix development"
evidence=IMP] [GO:0060068 "vagina development" evidence=IMP]
[GO:0060322 "head development" evidence=IGI] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061205 "paramesonephric
duct development" evidence=IMP] [GO:0072001 "renal system
development" evidence=IGI] [GO:0072049 "comma-shaped body
morphogenesis" evidence=IMP] [GO:0072050 "S-shaped body
morphogenesis" evidence=IMP] [GO:0072077 "renal vesicle
morphogenesis" evidence=IMP] [GO:0072178 "nephric duct
morphogenesis" evidence=IMP] [GO:0090009 "primitive streak
formation" evidence=IMP] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IMP]
[GO:2000543 "positive regulation of gastrulation" evidence=IMP]
[GO:2000744 "positive regulation of anterior head development"
evidence=IMP] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
MGI:MGI:99783 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0021517
GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GO:GO:0072049 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG
GO:GO:0060067 GO:GO:0035852 GO:GO:0072177 GO:GO:0072278
GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846
GO:GO:0035847 EMBL:Z27410 EMBL:S68107 EMBL:AF039706 EMBL:AF039705
IPI:IPI00119516 PIR:I48637 RefSeq:NP_032524.1 UniGene:Mm.4965
ProteinModelPortal:P63006 SMR:P63006 STRING:P63006 PRIDE:P63006
Ensembl:ENSMUST00000018842 GeneID:16869 KEGG:mmu:16869
InParanoid:P63006 NextBio:290830 Bgee:P63006 CleanEx:MM_LHX1
Genevestigator:P63006 GermOnline:ENSMUSG00000018698 Uniprot:P63006
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>RGD|71074 [details] [associations]
symbol:Lhx1 "LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001655 "urogenital system development"
evidence=ISO;ISS] [GO:0001657 "ureteric bud development"
evidence=ISO;ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISO;ISS] [GO:0001705 "ectoderm formation"
evidence=ISO;ISS] [GO:0001706 "endoderm formation" evidence=ISO;ISS]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007267 "cell-cell signaling"
evidence=ISO;ISS] [GO:0007389 "pattern specification process"
evidence=ISO;ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISO;ISS]
[GO:0009791 "post-embryonic development" evidence=ISO;ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISO;ISS]
[GO:0009948 "anterior/posterior axis specification"
evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO;ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO;ISS] [GO:0010468 "regulation of gene
expression" evidence=ISO;ISS] [GO:0010842 "retina layer formation"
evidence=ISO;ISS] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISO;ISS] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=ISO;ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISO;ISS] [GO:0021871 "forebrain
regionalization" evidence=ISO;ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=ISO;ISS]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA;ISO] [GO:0035502 "metanephric part of ureteric bud
development" evidence=IEP] [GO:0035846 "oviduct epithelium
development" evidence=ISO;ISS] [GO:0035847 "uterine epithelium
development" evidence=ISO;ISS] [GO:0035849 "nephric duct elongation"
evidence=IEA;ISO] [GO:0035852 "horizontal cell localization"
evidence=IEA;ISO] [GO:0040019 "positive regulation of embryonic
development" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=ISO;ISS] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISO;ISS] [GO:0048793
"pronephros development" evidence=IEA] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISO;ISS] [GO:0060065
"uterus development" evidence=ISO;ISS] [GO:0060066 "oviduct
development" evidence=ISO;ISS] [GO:0060067 "cervix development"
evidence=ISO;ISS] [GO:0060068 "vagina development" evidence=ISO;ISS]
[GO:0060322 "head development" evidence=ISO;ISS] [GO:0060429
"epithelium development" evidence=ISO;ISS] [GO:0061205
"paramesonephric duct development" evidence=ISO;ISS] [GO:0072001
"renal system development" evidence=ISO] [GO:0072049 "comma-shaped
body morphogenesis" evidence=ISO;ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISO;ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISO;ISS] [GO:0072164 "mesonephric tubule
development" evidence=IEP] [GO:0072177 "mesonephric duct
development" evidence=IEP] [GO:0072178 "nephric duct morphogenesis"
evidence=ISO;ISS] [GO:0072224 "metanephric glomerulus development"
evidence=IEP] [GO:0072278 "metanephric comma-shaped body
morphogenesis" evidence=IEP] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEP] [GO:0090009 "primitive streak
formation" evidence=ISO;ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISO;ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISO;ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71074 GO:GO:0005634 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059
GO:GO:0035502 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GeneTree:ENSGT00700000104177 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:S71523
IPI:IPI00199573 RefSeq:NP_665887.3 UniGene:Rn.127825
ProteinModelPortal:P63007 SMR:P63007 STRING:P63007
PhosphoSite:P63007 PRIDE:P63007 Ensembl:ENSRNOT00000003799
GeneID:257634 KEGG:rno:257634 InParanoid:P63007 NextBio:624166
Genevestigator:P63007 GermOnline:ENSRNOG00000002812 Uniprot:P63007
Length = 406
Score = 268 (99.4 bits), Expect = 3.7e-23, P = 3.7e-23
Identities = 54/132 (40%), Positives = 78/132 (59%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFG 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+GC G+S S L+ A + +H +C C C+ LS ++ +
Sbjct: 61 TKCAGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYI 106
Query: 120 -REGKLFCRNDF 130
E K C+ D+
Sbjct: 107 IDENKFVCKEDY 118
Score = 233 (87.1 bits), Expect = 4.1e-19, P = 4.1e-19
Identities = 36/56 (64%), Positives = 48/56 (85%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++ CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 MVHCAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 56
>UNIPROTKB|Q5ISK2 [details] [associations]
symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca
fascicularis" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009880 "embryonic pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY650378 ProteinModelPortal:Q5ISK2
Uniprot:Q5ISK2
Length = 403
Score = 264 (98.0 bits), Expect = 1.1e-22, P = 1.1e-22
Identities = 54/129 (41%), Positives = 76/129 (58%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFFR
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFFRCFGTKC 60
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS-RE 121
+GC G+S S L+ A + +H +C C C+ LS ++ + E
Sbjct: 61 AGCAQGISPSDLVRRAR--------------SKVFHLNCFTCMMCNKQLSTGEELYIIDE 106
Query: 122 GKLFCRNDF 130
K C+ D+
Sbjct: 107 NKFVCKEDY 115
Score = 229 (85.7 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 36/53 (67%), Positives = 46/53 (86%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++PILD+FLLNVL+R WH CV+C +C L++KCFSREGKL+C+NDFF
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSREGKLYCKNDFF 53
>UNIPROTKB|E1BQX0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=IEA] [GO:0021766 "hippocampus development" evidence=IEA]
[GO:0021846 "cell proliferation in forebrain" evidence=IEA]
[GO:0021879 "forebrain neuron differentiation" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 GO:GO:0021937
OMA:SHQGQEM EMBL:AADN02050410 EMBL:AADN02050411 EMBL:AADN02050412
EMBL:AADN02050413 EMBL:AADN02050414 IPI:IPI00574747
Ensembl:ENSGALT00000013517 NextBio:20921461 Uniprot:E1BQX0
Length = 402
Score = 263 (97.6 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 54/134 (40%), Positives = 78/134 (58%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCF REGKL+C+ +FFR
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFFREGKLYCKKNFFR-- 58
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKC 117
RF + CAGC + I L+ + +H +C C C+ LS ++
Sbjct: 59 -RFGT------------KCAGCSQGISPSDLVRKARNKVFHLNCFTCMVCNKQLSTGEEL 105
Query: 118 FS-REGKLFCRNDF 130
+ E K C+ D+
Sbjct: 106 YIIDENKFVCKEDY 119
Score = 224 (83.9 bits), Expect = 4.0e-18, P = 4.0e-18
Identities = 35/57 (61%), Positives = 47/57 (82%)
Query: 75 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
M++ CAGCE+PILD+FLLNVL+R WH CV+C +C L++KCF REGKL+C+ +FF
Sbjct: 1 MMVHCAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFFREGKLYCKKNFF 57
>FB|FBgn0002023 [details] [associations]
symbol:Lim3 "Lim3" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007399 "nervous system
development" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HSSP:P50480 FlyBase:FBgn0002023
EMBL:BT003469 ProteinModelPortal:Q86P58 SMR:Q86P58 IntAct:Q86P58
STRING:Q86P58 PRIDE:Q86P58 InParanoid:Q86P58 ArrayExpress:Q86P58
Bgee:Q86P58 Uniprot:Q86P58
Length = 523
Score = 252 (93.8 bits), Expect = 7.9e-21, P = 7.9e-21
Identities = 50/130 (38%), Positives = 74/130 (56%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF+S R+
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFFKSNRRYG 181
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C+ C+ I + + + +H C C C TL+ D+ + E
Sbjct: 182 T------------KCSACDMGIPPTQVVRRAQDNVYHLQCFLCAMCSRTLNTGDEFYLME 229
Query: 122 G-KLFCRNDF 130
KL C+ D+
Sbjct: 230 DRKLICKRDY 239
Score = 212 (79.7 bits), Expect = 1.8e-16, P = 1.8e-16
Identities = 33/53 (62%), Positives = 43/53 (81%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C GC + ILD+F+L VLERTWHA C++C +CH L+DKCF+R G+LFC+ DFF
Sbjct: 122 CGGCHELILDRFILKVLERTWHAKCLQCSECHGQLNDKCFARNGQLFCKEDFF 174
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 238 (88.8 bits), Expect = 9.1e-20, P = 9.1e-20
Identities = 49/130 (37%), Positives = 73/130 (56%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+ DFF+ RF
Sbjct: 33 CAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKEDFFK---RFG 89
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 90 T------------KCASCQQGIPPTQVVRKAQDFVYHLHCFACVMCSRQLATGDEFYLME 137
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 DGRLVCKEDY 147
Score = 211 (79.3 bits), Expect = 1.0e-16, P = 1.0e-16
Identities = 33/63 (52%), Positives = 46/63 (73%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DCH L+DKCFSR G ++C+
Sbjct: 23 LGVPLQQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFSRAGNVYCKE 82
Query: 129 DFF 131
DFF
Sbjct: 83 DFF 85
>UNIPROTKB|F1S681 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 GO:GO:0021526
OMA:LSFRDDQ EMBL:CU855640 EMBL:FP476046 Ensembl:ENSSSCT00000016925
Uniprot:F1S681
Length = 369
Score = 226 (84.6 bits), Expect = 1.5e-18, P = 1.5e-18
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 9 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 65
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 66 T------------KCTACQQGIPPTQVVRKAQDFVYHLPCFACIICNRQLATGDEFYLME 113
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 114 DGRLVCKEDY 123
Score = 199 (75.1 bits), Expect = 1.8e-15, P = 1.8e-15
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 73 SSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
S+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 3 STEIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 61
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 226 (84.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 87 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 134
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 135 DGRLVCKEDY 144
Score = 202 (76.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 226 (84.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 87 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 134
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 135 DGRLVCKEDY 144
Score = 202 (76.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 226 (84.6 bits), Expect = 2.1e-18, P = 2.1e-18
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 30 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 86
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 87 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 134
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 135 DGRLVCKEDY 144
Score = 202 (76.2 bits), Expect = 1.0e-15, P = 1.0e-15
Identities = 31/63 (49%), Positives = 45/63 (71%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G+ + CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+
Sbjct: 20 LGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKE 79
Query: 129 DFF 131
DFF
Sbjct: 80 DFF 82
>UNIPROTKB|F1PCI5 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 GeneTree:ENSGT00700000104177
GO:GO:0021526 OMA:LSFRDDQ EMBL:AAEX03005118 EMBL:AAEX03005119
Ensembl:ENSCAFT00000031328 Uniprot:F1PCI5
Length = 395
Score = 226 (84.6 bits), Expect = 2.2e-18, P = 2.2e-18
Identities = 46/130 (35%), Positives = 72/130 (55%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF+ RF
Sbjct: 35 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFFK---RFG 91
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C+ L+ D+ + E
Sbjct: 92 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICNRQLATGDEFYLME 139
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 DGRLVCKEDY 149
Score = 197 (74.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 30/53 (56%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH+ C++C DC L+D+CFSR G ++C+ DFF
Sbjct: 35 CAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRAGSVYCKEDFF 87
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 217 (81.4 bits), Expect = 7.5e-18, P = 7.5e-18
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + ILDKF+L VL+R WH+ C++C DC L+++CF+R G ++C+ DFF+ RF
Sbjct: 5 CAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFFK---RFG 61
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C C++ I + + + +H C C C L+ D+ + E
Sbjct: 62 T------------KCTACQQGIPPTQVVRKAQDFVYHLHCFACIICSRQLATGDEFYLME 109
Query: 122 -GKLFCRNDF 130
G+L C+ D+
Sbjct: 110 DGRLVCKEDY 119
Score = 190 (71.9 bits), Expect = 5.4e-15, P = 5.4e-15
Identities = 28/53 (52%), Positives = 41/53 (77%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + ILDKF+L VL+R WH+ C++C DC L+++CF+R G ++C+ DFF
Sbjct: 5 CAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARAGSVYCKEDFF 57
>UNIPROTKB|Q8UVR3 [details] [associations]
symbol:lmx1b.1 "LIM homeobox transcription factor 1-beta.1"
species:8355 "Xenopus laevis" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0039020 "pronephric nephron tubule development"
evidence=IMP] [GO:0072013 "glomus development" evidence=IEP;IMP]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0072013
GO:GO:0039020 HOVERGEN:HBG052335 KO:K09371 EMBL:AF414086
RefSeq:NP_001083902.1 UniGene:Xl.12464 HSSP:P50480
ProteinModelPortal:Q8UVR3 GeneID:399182 KEGG:xla:399182 CTD:399182
Xenbase:XB-GENE-494754 Uniprot:Q8UVR3
Length = 400
Score = 212 (79.7 bits), Expect = 8.5e-17, P = 8.5e-17
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KLFC+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNEASWHEECLQCTVCQQPLTTSCYFRDRKLFCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 161 GQLLCKSDY 169
Score = 96 (38.9 bits), Expect = 0.00040, P = 0.00040
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 5 CAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDFFRSPV 61
C+GC EK +F++ LE +H C C C L D+ +EG+L C++D+ +
Sbjct: 115 CSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKEGQLLCKSDYEKEKD 174
Query: 62 RFPSG 66
SG
Sbjct: 175 LLSSG 179
>UNIPROTKB|P53413 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
EMBL:L39880 EMBL:U41823 IPI:IPI00599399 RefSeq:NP_990689.1
UniGene:Gga.758 ProteinModelPortal:P53413 STRING:P53413
GeneID:396312 KEGG:gga:396312 CTD:4010 InParanoid:P53413
NextBio:20816360 Uniprot:P53413
Length = 377
Score = 210 (79.0 bits), Expect = 1.1e-16, P = 1.1e-16
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>UNIPROTKB|O97581 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9823 "Sus
scrofa" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0003677 "DNA binding" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 EMBL:AF063245 UniGene:Ssc.26829
ProteinModelPortal:O97581 SMR:O97581 Uniprot:O97581
Length = 383
Score = 210 (79.0 bits), Expect = 1.2e-16, P = 1.2e-16
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR L+C++DFF+ RF
Sbjct: 16 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESLYCKDDFFK---RFG 72
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 73 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 120
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 121 DSRLVCKADY 130
Score = 190 (71.9 bits), Expect = 2.0e-14, P = 2.0e-14
Identities = 28/53 (52%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR L+C++DFF
Sbjct: 16 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESLYCKDDFF 68
>MGI|MGI:1100513 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10090 "Mus musculus" [GO:0001764 "neuron migration"
evidence=IMP] [GO:0002930 "trabecular meshwork development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008219 "cell death" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0021587 "cerebellum morphogenesis"
evidence=IMP] [GO:0021954 "central nervous system neuron
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0030199 "collagen fibril organization"
evidence=IMP] [GO:0030326 "embryonic limb morphogenesis"
evidence=NAS] [GO:0030901 "midbrain development" evidence=IMP]
[GO:0035108 "limb morphogenesis" evidence=IMP] [GO:0035265 "organ
growth" evidence=IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AF078166
MGI:MGI:1100513 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0008283 GO:GO:0008219 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0030326 GO:GO:0030901 GO:GO:0035265 EMBL:CH466542
GO:GO:0009953 GO:GO:0021954 GeneTree:ENSGT00700000104050
GO:GO:0021587 HOGENOM:HOG000231629 eggNOG:NOG243427
HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN CTD:4010
EMBL:AL929212 EMBL:BC119169 EMBL:BC125469 IPI:IPI00132794
RefSeq:NP_034855.2 UniGene:Mm.39825 ProteinModelPortal:O88609
SMR:O88609 STRING:O88609 PhosphoSite:O88609 PRIDE:O88609
Ensembl:ENSMUST00000041730 GeneID:16917 KEGG:mmu:16917
InParanoid:Q0VEN6 OMA:NRMEGMM NextBio:290964 Bgee:O88609
CleanEx:MM_LMX1B Genevestigator:O88609
GermOnline:ENSMUSG00000038765 GO:GO:0002930 Uniprot:O88609
Length = 372
Score = 209 (78.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>UNIPROTKB|G3V877 [details] [associations]
symbol:Lmx1b "LIM homeobox transcription factor 1 beta"
species:10116 "Rattus norvegicus" [GO:0001764 "neuron migration"
evidence=IEA] [GO:0002930 "trabecular meshwork development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008219 "cell death" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021587 "cerebellum morphogenesis" evidence=IEA]
[GO:0021954 "central nervous system neuron development"
evidence=IEA] [GO:0030199 "collagen fibril organization"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IEA] [GO:0035265 "organ
growth" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:620843 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:CH474001 OMA:NRMEGMM
UniGene:Rn.92364 Ensembl:ENSRNOT00000022953 Uniprot:G3V877
Length = 372
Score = 209 (78.6 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 210 (79.0 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEYYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 189 (71.6 bits), Expect = 2.9e-14, P = 2.9e-14
Identities = 30/60 (50%), Positives = 44/60 (73%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
SS + CAGC + I+D+F+L VL+R WH+ C++C DC L+DKCFSR ++C++DFF
Sbjct: 21 SSQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRGDSVYCKDDFF 80
>UNIPROTKB|O60663 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0001701 "in utero embryonic development" evidence=NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=ISS] [GO:0007275
"multicellular organismal development" evidence=NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0001701
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0009953 HOGENOM:HOG000231629
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OrthoDB:EOG4QFWDN
CTD:4010 EMBL:AF057135 EMBL:AF059575 EMBL:AF059572 EMBL:AF059573
EMBL:AF059574 EMBL:AL161908 EMBL:AL161731 EMBL:BC069601
EMBL:BC112120 EMBL:BC113491 IPI:IPI00030989 IPI:IPI00220363
RefSeq:NP_001167618.1 RefSeq:NP_002307.2 UniGene:Hs.129133
ProteinModelPortal:O60663 SMR:O60663 IntAct:O60663 STRING:O60663
PhosphoSite:O60663 PaxDb:O60663 PRIDE:O60663 DNASU:4010
Ensembl:ENST00000373474 Ensembl:ENST00000425646 GeneID:4010
KEGG:hsa:4010 UCSC:uc004bqj.3 GeneCards:GC09P129376 HGNC:HGNC:6654
MIM:161200 MIM:602575 neXtProt:NX_O60663 Orphanet:2614
PharmGKB:PA30417 InParanoid:O60663 PhylomeDB:O60663 GenomeRNAi:4010
NextBio:15732 ArrayExpress:O60663 Bgee:O60663 CleanEx:HS_LMX1B
Genevestigator:O60663 GermOnline:ENSG00000136944 Uniprot:O60663
Length = 379
Score = 209 (78.6 bits), Expect = 1.5e-16, P = 1.5e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>UNIPROTKB|B7ZLH2 [details] [associations]
symbol:LMX1B "LMX1B protein" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 HOGENOM:HOG000231629 HOVERGEN:HBG052335 KO:K09371
CTD:4010 EMBL:AL161908 EMBL:AL161731 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 PharmGKB:PA30417
GenomeRNAi:4010 NextBio:15732 EMBL:BC143801 IPI:IPI00956472
RefSeq:NP_001167617.1 SMR:B7ZLH2 STRING:B7ZLH2
Ensembl:ENST00000561065 Uniprot:B7ZLH2
Length = 383
Score = 209 (78.6 bits), Expect = 1.6e-16, P = 1.6e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKGDY 146
>UNIPROTKB|F8VYP0 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
IPI:IPI00220363 RefSeq:NP_002307.2 UniGene:Hs.129133 DNASU:4010
GeneID:4010 KEGG:hsa:4010 HGNC:HGNC:6654 GenomeRNAi:4010
NextBio:15732 ProteinModelPortal:F8VYP0 SMR:F8VYP0 PRIDE:F8VYP0
Ensembl:ENST00000526117 UCSC:uc004bqi.3 ArrayExpress:F8VYP0
Bgee:F8VYP0 Uniprot:F8VYP0
Length = 395
Score = 209 (78.6 bits), Expect = 1.7e-16, P = 1.7e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>UNIPROTKB|F8W7W6 [details] [associations]
symbol:LMX1B "LIM homeobox transcription factor 1-beta"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0002930 "trabecular meshwork development" evidence=IEA]
[GO:0008219 "cell death" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA] [GO:0021587 "cerebellum morphogenesis"
evidence=IEA] [GO:0021954 "central nervous system neuron
development" evidence=IEA] [GO:0030199 "collagen fibril
organization" evidence=IEA] [GO:0030901 "midbrain development"
evidence=IEA] [GO:0035108 "limb morphogenesis" evidence=IEA]
[GO:0035265 "organ growth" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 GO:GO:0008283
GO:GO:0008219 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0030901
GO:GO:0035265 GO:GO:0009953 GO:GO:0021954 GO:GO:0035108
GO:GO:0021587 KO:K09371 CTD:4010 EMBL:AL161908 EMBL:AL161731
UniGene:Hs.129133 DNASU:4010 GeneID:4010 KEGG:hsa:4010
HGNC:HGNC:6654 GenomeRNAi:4010 NextBio:15732 OMA:NRMEGMM
IPI:IPI00956472 RefSeq:NP_001167617.1 ProteinModelPortal:F8W7W6
SMR:F8W7W6 Ensembl:ENST00000355497 UCSC:uc011maa.2
ArrayExpress:F8W7W6 Bgee:F8W7W6 Uniprot:F8W7W6
Length = 406
Score = 209 (78.6 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 41/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 56 CEGCQRPISDRFLMRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY-------- 107
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 108 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKE 160
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 161 GQLLCKGDY 169
>ZFIN|ZDB-GENE-050114-2 [details] [associations]
symbol:lmx1bb "LIM homeobox transcription factor 1,
beta b" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0042472
"inner ear morphogenesis" evidence=IMP] [GO:0021592 "fourth
ventricle development" evidence=IGI] [GO:0060117 "auditory receptor
cell development" evidence=IMP] [GO:0032474 "otolith morphogenesis"
evidence=IMP] [GO:0048752 "semicircular canal morphogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] [GO:0061386 "closure of optic fissure"
evidence=IGI] [GO:0060041 "retina development in camera-type eye"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-050114-2 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0060041 GO:GO:0032474
GO:GO:0048752 GO:GO:0030917 GO:GO:0060117 GO:GO:0061386
GO:GO:0021592 HOVERGEN:HBG052335 KO:K09371 EMBL:AY894989
IPI:IPI00631669 RefSeq:NP_001020338.2 UniGene:Dr.108678
ProteinModelPortal:Q4VJ29 STRING:Q4VJ29 GeneID:554360
KEGG:dre:554360 CTD:554360 InParanoid:Q4VJ29 NextBio:20880753
Uniprot:Q4VJ29
Length = 375
Score = 207 (77.9 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 41/129 (31%), Positives = 67/129 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ RE KL+C+ D+
Sbjct: 33 CEGCQRPISDRFLMRVNESSWHEECLQCAVCQQPLTTSCYFRERKLYCKYDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H +C C C L D+ ++
Sbjct: 85 -------QQLFATKCSGCLEKIAPTEFVMRALECVYHLNCFCCCVCDRQLRKGDEFVLKD 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 202 (76.2 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 80
>UNIPROTKB|P36200 [details] [associations]
symbol:lhx3 "LIM/homeobox protein Lhx3" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 KO:K09374 HOVERGEN:HBG006263
CTD:8022 EMBL:Z22702 EMBL:Z11589 PIR:S38821 RefSeq:NP_001081623.1
UniGene:Xl.32 ProteinModelPortal:P36200 SMR:P36200 GeneID:397959
KEGG:xla:397959 Xenbase:XB-GENE-865930 Uniprot:P36200
Length = 395
Score = 207 (77.9 bits), Expect = 2.9e-16, P = 2.9e-16
Identities = 44/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C++DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYCKDDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + E +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQEFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 185 (70.2 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
CG S + CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C
Sbjct: 17 CGY-TGSPEIPQCAGCNQHIVDRFILKVLDRHWHSKCLKCNDCQIQLAEKCFSRGDSVYC 75
Query: 127 RNDFF 131
++DFF
Sbjct: 76 KDDFF 80
>UNIPROTKB|Q9UBR4 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEP] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0009887 "organ morphogenesis" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045893 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 EMBL:CH471090 GO:GO:0045944
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0005667 GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021983 GO:GO:0048839 GO:GO:0021527 EMBL:AL138781
GO:GO:0000988 GO:GO:0021521 Orphanet:226307 eggNOG:NOG275246
HOGENOM:HOG000231629 KO:K09374 GO:GO:0021520 HOVERGEN:HBG006263
CTD:8022 OMA:PLCAGCN EMBL:AF156888 EMBL:AF156889 EMBL:AH008761
EMBL:AF096169 EMBL:AF214637 EMBL:AF367089 EMBL:AF367085
EMBL:AF367086 EMBL:AF367087 EMBL:AF367088 IPI:IPI00002747
IPI:IPI00220680 RefSeq:NP_055379.1 RefSeq:NP_835258.1
UniGene:Hs.148427 ProteinModelPortal:Q9UBR4 SMR:Q9UBR4
STRING:Q9UBR4 PhosphoSite:Q9UBR4 DMDM:12643415 PRIDE:Q9UBR4
DNASU:8022 Ensembl:ENST00000371746 Ensembl:ENST00000371748
GeneID:8022 KEGG:hsa:8022 UCSC:uc004cha.3 GeneCards:GC09M139088
HGNC:HGNC:6595 MIM:221750 MIM:600577 neXtProt:NX_Q9UBR4
Orphanet:231720 PharmGKB:PA30366 OrthoDB:EOG4SBDZ0 ChiTaRS:LHX3
GenomeRNAi:8022 NextBio:30588 ArrayExpress:Q9UBR4 Bgee:Q9UBR4
CleanEx:HS_LHX3 Genevestigator:Q9UBR4 GermOnline:ENSG00000107187
GO:GO:0021526 Uniprot:Q9UBR4
Length = 397
Score = 207 (77.9 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 31 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYCKDDFFK---RFG 87
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 88 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 135
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 136 DSRLVCKADY 145
Score = 188 (71.2 bits), Expect = 3.8e-14, P = 3.8e-14
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 67 CGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFC 126
C +G + + + CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C
Sbjct: 20 CTLGGTREIPL-CAGCDQHILDRFILKALDRHWHSKCLKCSDCHTPLAERCFSRGESVYC 78
Query: 127 RNDFF 131
++DFF
Sbjct: 79 KDDFF 83
>UNIPROTKB|E2QZZ9 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 EMBL:AAEX03006760 EMBL:AAEX03006761
Ensembl:ENSCAFT00000031319 Uniprot:E2QZZ9
Length = 397
Score = 207 (77.9 bits), Expect = 3.0e-16, P = 3.0e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 187 (70.9 bits), Expect = 4.8e-14, P = 4.8e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFF 88
>UNIPROTKB|Q2TEA4 [details] [associations]
symbol:Lhx3 "LIM homeodomain 3 protein b isoform"
species:9913 "Bos taurus" [GO:0048839 "inner ear development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IEA] [GO:0021521 "ventral spinal cord interneuron
specification" evidence=IEA] [GO:0021520 "spinal cord motor neuron
cell fate specification" evidence=IEA] [GO:0008045 "motor neuron
axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0045944
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021983 GO:GO:0048839
GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021520
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN GO:GO:0021526
EMBL:DAAA02032311 EMBL:AY923832 EMBL:AY923833 IPI:IPI00687531
IPI:IPI01028343 RefSeq:NP_001033709.1 UniGene:Bt.45155
Ensembl:ENSBTAT00000055580 GeneID:539213 KEGG:bta:539213
NextBio:20877851 Uniprot:Q2TEA4
Length = 403
Score = 207 (77.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 187 (70.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHAPLAERCFSRGESVYCKDDFF 88
>UNIPROTKB|L7N0D8 [details] [associations]
symbol:LHX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] GeneTree:ENSGT00700000104177
EMBL:AAEX03006759 Ensembl:ENSCAFT00000020228 Uniprot:L7N0D8
Length = 403
Score = 207 (77.9 bits), Expect = 3.1e-16, P = 3.1e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 187 (70.9 bits), Expect = 5.0e-14, P = 5.0e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCTDCHTPLAERCFSRGESVYCKDDFF 88
>MGI|MGI:102673 [details] [associations]
symbol:Lhx3 "LIM homeobox protein 3" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001890
"placenta development" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IMP] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IGI] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IDA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IGI] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IDA] [GO:0021983
"pituitary gland development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IMP] [GO:0043066 "negative regulation of
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IGI;IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:102673 GO:GO:0043066 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890 GO:GO:0021983
GO:GO:0048839 GO:GO:0021527 GO:GO:0000988 GO:GO:0021521
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 GO:GO:0021520 PDB:2RGT PDBsum:2RGT PDB:2JTN PDBsum:2JTN
HOVERGEN:HBG006263 CTD:8022 OMA:PLCAGCN OrthoDB:EOG4SBDZ0
GO:GO:0021526 EMBL:L33776 EMBL:L38857 EMBL:L38249 EMBL:L38248
IPI:IPI00118214 IPI:IPI00263557 PIR:I59360 RefSeq:NP_001034742.1
UniGene:Mm.386765 ProteinModelPortal:P50481 SMR:P50481
MINT:MINT-7009840 STRING:P50481 PhosphoSite:P50481 PRIDE:P50481
Ensembl:ENSMUST00000028302 Ensembl:ENSMUST00000054099 GeneID:16871
KEGG:mmu:16871 EvolutionaryTrace:P50481 NextBio:290838 Bgee:P50481
CleanEx:MM_LHX3 Genevestigator:P50481 GermOnline:ENSMUSG00000026934
Uniprot:P50481
Length = 400
Score = 206 (77.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 186 (70.5 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 86
>UNIPROTKB|G3V8E3 [details] [associations]
symbol:Lhx3 "Protein Lhx3" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 RefSeq:XP_002726117.1 RefSeq:XP_002729190.1
UniGene:Rn.198623 PRIDE:G3V8E3 Ensembl:ENSRNOT00000025047
GeneID:170671 KEGG:rno:170671 NextBio:621169 Uniprot:G3V8E3
Length = 400
Score = 206 (77.6 bits), Expect = 3.9e-16, P = 3.9e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 90
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 91 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 138
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 139 DSRLVCKADY 148
Score = 186 (70.5 bits), Expect = 6.3e-14, P = 6.3e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 34 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 86
>UNIPROTKB|G3V9E7 [details] [associations]
symbol:Lhx3 "RCG45383, isoform CRA_b" species:10116 "Rattus
norvegicus" [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0008045 "motor
neuron axon guidance" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048839 "inner ear development" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71078 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 EMBL:CH474001 GeneTree:ENSGT00700000104177
KO:K09374 CTD:8022 OMA:PLCAGCN UniGene:Rn.198623 GeneID:170671
KEGG:rno:170671 NextBio:621169 RefSeq:XP_001059910.2
RefSeq:XP_001078243.2 Ensembl:ENSRNOT00000045587 Uniprot:G3V9E7
Length = 402
Score = 206 (77.6 bits), Expect = 4.0e-16, P = 4.0e-16
Identities = 43/130 (33%), Positives = 71/130 (54%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF+ RF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFFK---RFG 92
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C+ I + + + +H C C C L+ D+ + E
Sbjct: 93 T------------KCAACQLGIPPTQVVRRAQDFVYHLHCFACVVCKRQLATGDEFYLME 140
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 141 DSRLVCKADY 150
Score = 186 (70.5 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 27/53 (50%), Positives = 42/53 (79%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC++ ILD+F+L L+R WH+ C++C DCH L+++CFSR ++C++DFF
Sbjct: 36 CAGCDQHILDRFILKALDRHWHSKCLKCSDCHVPLAERCFSRGESVYCKDDFF 88
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 206 (77.6 bits), Expect = 4.1e-16, P = 4.1e-16
Identities = 44/130 (33%), Positives = 67/130 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C +PILD+++ VL + WH C+RC DC +S CFSR+G + C+ DF R R+
Sbjct: 68 CAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRDGLILCKTDFSR---RYS 124
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLN-VLERTWHADCVRCYDCHHTLS--DKCFSRE 121
CAGC+ + + L+ ++ +H C +C C L D+ + E
Sbjct: 125 Q------------RCAGCDGKLEKEDLVRRARDKVFHIRCFQCSVCQRLLDTGDQLYIME 172
Query: 122 GKLF-CRNDF 130
G F C++DF
Sbjct: 173 GNRFVCQSDF 182
>UNIPROTKB|F1NDZ5 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0002930 "trabecular meshwork
development" evidence=IEA] [GO:0008219 "cell death" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021587
"cerebellum morphogenesis" evidence=IEA] [GO:0021954 "central
nervous system neuron development" evidence=IEA] [GO:0030199
"collagen fibril organization" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0035108 "limb morphogenesis"
evidence=IEA] [GO:0035265 "organ growth" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0043565
GO:GO:0008270 GO:GO:0030199 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 IPI:IPI00599399 OMA:NRMEGMM
EMBL:AADN02026296 EMBL:AADN02026297 EMBL:AADN02026298
EMBL:AADN02031658 Ensembl:ENSGALT00000001376 Uniprot:F1NDZ5
Length = 377
Score = 203 (76.5 bits), Expect = 6.9e-16, P = 6.9e-16
Identities = 41/129 (31%), Positives = 66/129 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 34 CEGCQRPI-DRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK +F++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFAAKCSGCMEKIAPTEFVMRALECVYHLSCFCCCVCERQLRKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C++D+
Sbjct: 138 GQLLCKSDY 146
>ZFIN|ZDB-GENE-050114-3 [details] [associations]
symbol:lmx1ba "LIM homeobox transcription factor 1,
beta a" species:7955 "Danio rerio" [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0030917
"midbrain-hindbrain boundary development" evidence=IGI] [GO:0030902
"hindbrain development" evidence=IMP] [GO:0021592 "fourth ventricle
development" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0061386 "closure of optic fissure" evidence=IGI]
[GO:0060041 "retina development in camera-type eye" evidence=IGI]
[GO:0002072 "optic cup morphogenesis involved in camera-type eye
development" evidence=IGI] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-050114-3
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0060041 GeneTree:ENSGT00700000104050 GO:GO:0030917
GO:GO:0061386 HOGENOM:HOG000231629 GO:GO:0021592 HOVERGEN:HBG052335
EMBL:BX511196 EMBL:CABZ01060115 EMBL:CABZ01060116 EMBL:CABZ01060117
EMBL:CABZ01060118 EMBL:CABZ01060119 EMBL:CABZ01084097
EMBL:CABZ01084098 EMBL:CABZ01084099 EMBL:CABZ01084100 EMBL:AY551078
IPI:IPI00616332 UniGene:Dr.94065 Ensembl:ENSDART00000126544
Uniprot:Q4L1M5
Length = 375
Score = 202 (76.2 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 40/129 (31%), Positives = 65/129 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC +PI D+FLL + + +WH +C++C C L+ C+SR+ KL+C++D+
Sbjct: 33 CEGCHRPISDRFLLRMNDSSWHEECLQCSVCQQLLTMSCYSRDHKLYCKHDY-------- 84
Query: 65 SGCGVGLSSSMLISCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSRE 121
C+GC EK + ++ LE +H C C C L D+ +E
Sbjct: 85 -------QQLFATKCSGCLEKISPTELVMRALESVYHLSCFCCCVCERRLCKGDEFVLKE 137
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 138 GQLLCKTDY 146
>UNIPROTKB|P53412 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0000988 eggNOG:NOG275246
GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 EMBL:L35570 IPI:IPI00651346 PIR:I50376
RefSeq:NP_001025506.1 UniGene:Gga.91 ProteinModelPortal:P53412
SMR:P53412 STRING:P53412 Ensembl:ENSGALT00000002663 GeneID:373940
KEGG:gga:373940 CTD:8022 InParanoid:P53412 OMA:PLCAGCN
NextBio:20813472 ArrayExpress:P53412 Uniprot:P53412
Length = 395
Score = 202 (76.2 bits), Expect = 1.1e-15, P = 1.1e-15
Identities = 43/130 (33%), Positives = 70/130 (53%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF+ RF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFFK---RFG 84
Query: 65 SGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ CA C++ I + + + +H C C C L+ D+ + E
Sbjct: 85 T------------KCAACQQGIPPTQVVRRAQDFVYHLHCFACIVCKRQLATGDEFYLME 132
Query: 122 -GKLFCRNDF 130
+L C+ D+
Sbjct: 133 DSRLVCKADY 142
Score = 179 (68.1 bits), Expect = 3.6e-13, P = 3.6e-13
Identities = 27/53 (50%), Positives = 40/53 (75%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
CAGC + I+D+F+L VL+R WH+ C++C DC L++KCFSR ++C+ DFF
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRGDGVYCKEDFF 80
>ZFIN|ZDB-GENE-040624-1 [details] [associations]
symbol:isl1l "islet1, like" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-040624-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 HOVERGEN:HBG004671
HOGENOM:HOG000236304 eggNOG:NOG295777 EMBL:AY423019 IPI:IPI00495237
RefSeq:NP_001002043.1 UniGene:Dr.156646 ProteinModelPortal:Q6TEN0
SMR:Q6TEN0 GeneID:415131 KEGG:dre:415131 CTD:415131
NextBio:20818810 Uniprot:Q6TEN0
Length = 323
Score = 194 (73.4 bits), Expect = 3.7e-15, P = 3.7e-15
Identities = 44/128 (34%), Positives = 65/128 (50%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC ILD+F++ V + WHA C++C +CH L + C F R+GK FCR + R
Sbjct: 19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHYSR--- 75
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDK-FLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
LS+S CA C+K + K F++ +H C RC C+ L D+
Sbjct: 76 ---------LSTS---KCAKCDKAFISKEFVMRSQVNIYHVQCFRCEGCNRPLLSGDEYV 123
Query: 119 SREGKLFC 126
++G+L C
Sbjct: 124 LQDGQLLC 131
Score = 140 (54.3 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC ILD+F++ V + WHA C++C +CH L + C F R+GK FCR +
Sbjct: 19 CVGCGLEILDRFIVRVSPDLEWHARCLKCAECHQFLDESCTCFIRDGKTFCREHY 73
>UNIPROTKB|Q68EY3 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8355
"Xenopus laevis" [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
KO:K09373 HOVERGEN:HBG006262 HSSP:P61969 EMBL:BC080067
RefSeq:NP_001087527.1 UniGene:Xl.28959 ProteinModelPortal:Q68EY3
SMR:Q68EY3 GeneID:447351 KEGG:xla:447351 CTD:447351
Xenbase:XB-GENE-866119 Uniprot:Q68EY3
Length = 331
Score = 192 (72.6 bits), Expect = 7.0e-15, P = 7.0e-15
Identities = 38/130 (29%), Positives = 69/130 (53%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C TL + CF+++G ++C+ D++R V+
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYYRFSVK 132
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSR 120
+ C +G+S+S ++ + E +H C C C+ TLS D+ +
Sbjct: 133 RCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLSTGDQFGMK 178
Query: 121 EGKLFCRNDF 130
E ++CR F
Sbjct: 179 ENLVYCRIHF 188
Score = 135 (52.6 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 19/55 (34%), Positives = 36/55 (65%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C TL + CF+++G ++C+ D++
Sbjct: 73 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLTLESELTCFAKDGSIYCKEDYY 127
>UNIPROTKB|Q8TE12 [details] [associations]
symbol:LMX1A "LIM homeobox transcription factor 1-alpha"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001558 "regulation of cell growth" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0021542 "dentate
gyrus development" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0021953 "central nervous system
neuron differentiation" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IEA] [GO:0071542 "dopaminergic
neuron differentiation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 EMBL:CH471067 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953
EMBL:AY078398 EMBL:AY078391 EMBL:AY078392 EMBL:AY078393
EMBL:AY078394 EMBL:AY078395 EMBL:AY078396 EMBL:AY078397
EMBL:AK127724 EMBL:AL390730 EMBL:AL160058 EMBL:BC119743
EMBL:BC119744 IPI:IPI00152586 IPI:IPI00328299 RefSeq:NP_001167540.1
RefSeq:NP_796372.1 UniGene:Hs.667312 ProteinModelPortal:Q8TE12
SMR:Q8TE12 STRING:Q8TE12 PhosphoSite:Q8TE12 DMDM:27923801
PRIDE:Q8TE12 DNASU:4009 Ensembl:ENST00000294816
Ensembl:ENST00000342310 Ensembl:ENST00000367893 GeneID:4009
KEGG:hsa:4009 UCSC:uc001gcz.2 UCSC:uc021pdy.1 CTD:4009
GeneCards:GC01M165171 HGNC:HGNC:6653 HPA:HPA028051 HPA:HPA030088
MIM:600298 neXtProt:NX_Q8TE12 PharmGKB:PA30416 eggNOG:NOG243427
HOVERGEN:HBG052335 InParanoid:Q8TE12 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN PhylomeDB:Q8TE12 GenomeRNAi:4009 NextBio:15724
ArrayExpress:Q8TE12 Bgee:Q8TE12 CleanEx:HS_LMX1A
Genevestigator:Q8TE12 GermOnline:ENSG00000162761 Uniprot:Q8TE12
Length = 382
Score = 194 (73.4 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 39/129 (30%), Positives = 62/129 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ ILD+FLL + + WH CV+C C L CF R+ KL+C+ D+
Sbjct: 35 CEGCQRVILDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>FB|FBgn0051988 [details] [associations]
symbol:CG31988 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 HSSP:P48059 OrthoDB:EOG4H44KS
EMBL:AY069027 RefSeq:NP_610098.1 UniGene:Dm.21307 SMR:Q8T0V8
STRING:Q8T0V8 EnsemblMetazoa:FBtr0081490 GeneID:326182
KEGG:dme:Dmel_CG31988 UCSC:CG31988-RA FlyBase:FBgn0051988
InParanoid:Q8T0V8 OMA:AMNAKWH GenomeRNAi:326182 NextBio:847500
Uniprot:Q8T0V8
Length = 178
Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
Identities = 43/126 (34%), Positives = 64/126 (50%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + E +WH DC C C L+++ F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYERDGKPYCKKDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH DC RC C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRDCFRCNKCENPITSQTFTID 167
Query: 122 G-KLFC 126
G K C
Sbjct: 168 GDKPVC 173
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 40/131 (30%), Positives = 65/131 (49%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVE--- 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
R+ +CAGC+KPIL+K + + E +WH DC C C L+++ F
Sbjct: 61 RYT------------YTCAGCKKPILEKTICAMGE-SWHEDCFCCGGACKKPLANQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKKDY 118
>UNIPROTKB|F1MC25 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0021953
"central nervous system neuron differentiation" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=IEA] [GO:0021542
"dentate gyrus development" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0001558 "regulation of cell growth"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0001558 GO:GO:0046872 GO:GO:0071542
GO:GO:0043565 GO:GO:0008270 GO:GO:0045665 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GeneTree:ENSGT00700000104050 GO:GO:0021542
GO:GO:0021953 CTD:4009 KO:K09371 OMA:GNAGMEG EMBL:DAAA02006817
EMBL:DAAA02006818 EMBL:DAAA02006819 EMBL:DAAA02006820
EMBL:DAAA02006821 EMBL:DAAA02006822 IPI:IPI00701360
RefSeq:NP_001178254.1 UniGene:Bt.106456 Ensembl:ENSBTAT00000015947
GeneID:510296 KEGG:bta:510296 NextBio:20869365 Uniprot:F1MC25
Length = 382
Score = 188 (71.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>UNIPROTKB|F1PDJ1 [details] [associations]
symbol:LMX1A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 CTD:4009 KO:K09371 OMA:GNAGMEG
EMBL:AAEX03018391 EMBL:AAEX03018392 RefSeq:XP_851352.2
Ensembl:ENSCAFT00000021142 GeneID:609061 KEGG:cfa:609061
Uniprot:F1PDJ1
Length = 382
Score = 188 (71.2 bits), Expect = 3.4e-14, P = 3.4e-14
Identities = 38/129 (29%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYDY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>FB|FBgn0036274 [details] [associations]
symbol:CG4328 species:7227 "Drosophila melanogaster"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0048813 "dendrite morphogenesis" evidence=IMP] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0006911 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0048813
GeneTree:ENSGT00700000104050 EMBL:BT050501 RefSeq:NP_648567.2
UniGene:Dm.27132 SMR:Q9VTW3 IntAct:Q9VTW3 MINT:MINT-301655
EnsemblMetazoa:FBtr0301071 GeneID:39405 KEGG:dme:Dmel_CG4328
UCSC:CG4328-RA FlyBase:FBgn0036274 InParanoid:Q9VTW3 OMA:ETNKENC
OrthoDB:EOG4B8GVN GenomeRNAi:39405 NextBio:813480 Uniprot:Q9VTW3
Length = 544
Score = 189 (71.6 bits), Expect = 6.0e-14, P = 6.0e-14
Identities = 41/132 (31%), Positives = 70/132 (53%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPV 61
L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR D+ R +
Sbjct: 196 LSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCRVDYERLYI 255
Query: 62 RFPS-GCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCF 118
R GCG+ +++ D+ ++ E +H C C C L ++
Sbjct: 256 RNHCLGCGLKIAA--------------DELVMRCHENVFHLKCFACVVCGALLKKGEQYV 301
Query: 119 SREGKLFCRNDF 130
++G+LFCR D+
Sbjct: 302 VKQGQLFCRFDY 313
Score = 157 (60.3 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 68 GVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCR 127
G+ ++S L CA C +PI D++++ V+E ++H C++C C L C++REGKL+CR
Sbjct: 188 GLAMASPQLSQCAHCCQPICDRYIMRVVENSFHEGCLKCTACSLHLVHSCYAREGKLYCR 247
Query: 128 NDF 130
D+
Sbjct: 248 VDY 250
>WB|WBGene00002987 [details] [associations]
symbol:lim-4 species:6239 "Caenorhabditis elegans"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;ISS] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0001708 "cell fate specification"
evidence=IMP] [GO:0005623 "cell" evidence=IDA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0005623
GeneTree:ENSGT00700000104050 EMBL:FO081410 HSSP:P50480 EMBL:U72348
PIR:T27637 RefSeq:NP_508669.1 UniGene:Cel.665
ProteinModelPortal:G5EEA1 SMR:G5EEA1 EnsemblMetazoa:ZC64.4
GeneID:180672 KEGG:cel:CELE_ZC64.4 CTD:180672 WormBase:ZC64.4
OMA:ARQKKWH NextBio:910388 Uniprot:G5EEA1
Length = 355
Score = 182 (69.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 38/134 (28%), Positives = 66/134 (49%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSP 60
+++ C C+ I DKF L++ R +H +C++C C + LS+KCF ++ +C+ +FR+
Sbjct: 94 VIVICTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNKCFYKDKTFYCKGCYFRTH 153
Query: 61 VRFP-SGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
V S C + CA C++ I ++ +H C C C LS ++
Sbjct: 154 VTSTASSC-----RELGPKCASCDRTIQATDWVRRARNYVYHLACFSCNQCKRQLSTGEE 208
Query: 117 CFSREGKLFCRNDF 130
+EG L C+ F
Sbjct: 209 YALQEGNLLCKQHF 222
Score = 131 (51.2 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 19/58 (32%), Positives = 37/58 (63%)
Query: 74 SMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
++++ C C+ I DKF L++ R +H +C++C C + LS+KCF ++ +C+ +F
Sbjct: 93 AVIVICTQCQHQIQDKFFLSIDGRNYHENCLQCSTCENPLSNKCFYKDKTFYCKGCYF 150
>UNIPROTKB|D6RBJ1 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HOGENOM:HOG000236304 HGNC:HGNC:6132
EMBL:AC010478 IPI:IPI00966899 ProteinModelPortal:D6RBJ1 SMR:D6RBJ1
Ensembl:ENST00000511384 ArrayExpress:D6RBJ1 Bgee:D6RBJ1
Uniprot:D6RBJ1
Length = 326
Score = 180 (68.4 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>UNIPROTKB|A6H796 [details] [associations]
symbol:ISL1 "ISL1 protein" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148
GO:GO:0003215 GO:GO:0060384 GO:GO:0021520 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:DAAA02050419 EMBL:BC146163
IPI:IPI00854388 RefSeq:NP_001092600.1 UniGene:Bt.28168 SMR:A6H796
STRING:A6H796 Ensembl:ENSBTAT00000001638 GeneID:614040
KEGG:bta:614040 InParanoid:A6H796 NextBio:20898906 Uniprot:A6H796
Length = 349
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>UNIPROTKB|P61371 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0003266 "regulation of secondary heart
field cardioblast proliferation" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0008284 "positive regulation
of cell proliferation" evidence=IEA] [GO:0021520 "spinal cord motor
neuron cell fate specification" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021983 "pituitary
gland development" evidence=IEA] [GO:0031103 "axon regeneration"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=ISS] [GO:0010575 "positive
regulation vascular endothelial growth factor production"
evidence=ISS] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=ISS] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=ISS] [GO:0045766
"positive regulation of angiogenesis" evidence=ISS] [GO:0071657
"positive regulation of granulocyte colony-stimulating factor
production" evidence=ISS] [GO:0005737 "cytoplasm" evidence=NAS]
[GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IDA;NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0021522
"spinal cord motor neuron differentiation" evidence=ISS]
[GO:0048762 "mesenchymal cell differentiation" evidence=ISS]
[GO:0031016 "pancreas development" evidence=ISS] [GO:1901258
"positive regulation of macrophage colony-stimulating factor
production" evidence=ISS] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=ISS] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=ISS] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=ISS] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=ISS]
[GO:0050728 "negative regulation of inflammatory response"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0048936 "peripheral nervous system
neuron axonogenesis" evidence=ISS] [GO:0048665 "neuron fate
specification" evidence=ISS] [GO:0021559 "trigeminal nerve
development" evidence=ISS] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=ISS] [GO:0048880 "sensory system
development" evidence=ISS] [GO:0060384 "innervation" evidence=ISS]
[GO:0060413 "atrial septum morphogenesis" evidence=ISS] [GO:0060037
"pharyngeal system development" evidence=ISS] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=ISS]
[GO:0003215 "cardiac right ventricle morphogenesis" evidence=ISS]
[GO:0003151 "outflow tract morphogenesis" evidence=ISS] [GO:0003148
"outflow tract septum morphogenesis" evidence=ISS] [GO:0003139
"secondary heart field specification" evidence=IMP] [GO:0043425
"bHLH transcription factor binding" evidence=IPI] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0060913 "cardiac cell fate
determination" evidence=IDA] [GO:0071385 "cellular response to
glucocorticoid stimulus" evidence=ISS] [GO:0032024 "positive
regulation of insulin secretion" evidence=IC] [GO:0090074 "negative
regulation of protein homodimerization activity" evidence=ISS]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=ISS] [GO:0030331 "estrogen receptor
binding" evidence=ISS] [GO:0016922 "ligand-dependent nuclear
receptor binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0050728 GO:GO:0008270 GO:GO:0071385 GO:GO:0045665
GO:GO:0043524 GO:GO:0032755 GO:GO:0010575 GO:GO:0032024
GO:GO:0003700 GO:GO:0045766 GO:GO:0003682 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0060037 GO:GO:0090090 GO:GO:0032731 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0030331 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0048665 GO:GO:0032729
GO:GO:0032760 GO:GO:0016922 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0048762 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0032730 GO:GO:0032735 GO:GO:0071657
GO:GO:0060413 GO:GO:0033147 GO:GO:0003266 eggNOG:COG5576
GO:GO:0003148 GO:GO:0003215 GO:GO:0060384 GO:GO:0021520
GO:GO:0032725 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
EMBL:S70721 EMBL:U07559 EMBL:BC031213 IPI:IPI00025071 PIR:I53277
RefSeq:NP_002193.2 UniGene:Hs.505 ProteinModelPortal:P61371
SMR:P61371 IntAct:P61371 STRING:P61371 PhosphoSite:P61371
DMDM:47606423 PRIDE:P61371 DNASU:3670 Ensembl:ENST00000230658
GeneID:3670 KEGG:hsa:3670 UCSC:uc003jor.3 GeneCards:GC05P050714
HGNC:HGNC:6132 MIM:600366 neXtProt:NX_P61371 PharmGKB:PA29932
InParanoid:P61371 PhylomeDB:P61371 GenomeRNAi:3670 NextBio:14363
ArrayExpress:P61371 Bgee:P61371 CleanEx:HS_ISL1
Genevestigator:P61371 GermOnline:ENSG00000016082 GO:GO:0060913
GO:GO:0060379 GO:GO:0090074 GO:GO:0048880 GO:GO:0021524
Uniprot:P61371
Length = 349
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>MGI|MGI:101791 [details] [associations]
symbol:Isl1 "ISL1 transcription factor, LIM/homeodomain"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO;IDA] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=ISO] [GO:0001755 "neural
crest cell migration" evidence=IGI] [GO:0003007 "heart
morphogenesis" evidence=IGI] [GO:0003139 "secondary heart field
specification" evidence=ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IGI] [GO:0003151 "outflow tract
morphogenesis" evidence=IGI] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IGI] [GO:0003215 "cardiac right ventricle
morphogenesis" evidence=IGI] [GO:0003266 "regulation of secondary
heart field cardioblast proliferation" evidence=IMP] [GO:0003677
"DNA binding" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007507
"heart development" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IDA] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0010575 "positive regulation vascular
endothelial growth factor production" evidence=IDA] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=ISO]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IMP] [GO:0021524 "visceral motor neuron
differentiation" evidence=IGI] [GO:0021559 "trigeminal nerve
development" evidence=IMP] [GO:0021983 "pituitary gland
development" evidence=IMP] [GO:0030182 "neuron differentiation"
evidence=IGI;IMP] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0031016 "pancreas development" evidence=IMP]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IMP]
[GO:0032024 "positive regulation of insulin secretion"
evidence=ISO] [GO:0032725 "positive regulation of granulocyte
macrophage colony-stimulating factor production" evidence=IDA]
[GO:0032729 "positive regulation of interferon-gamma production"
evidence=IDA] [GO:0032730 "positive regulation of interleukin-1
alpha production" evidence=IDA] [GO:0032731 "positive regulation of
interleukin-1 beta production" evidence=IDA] [GO:0032735 "positive
regulation of interleukin-12 production" evidence=IDA] [GO:0032755
"positive regulation of interleukin-6 production" evidence=IDA]
[GO:0032760 "positive regulation of tumor necrosis factor
production" evidence=IDA] [GO:0033147 "negative regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0042517 "positive regulation of tyrosine phosphorylation of
Stat3 protein" evidence=IDA] [GO:0043388 "positive regulation of
DNA binding" evidence=IDA] [GO:0043425 "bHLH transcription factor
binding" evidence=ISO] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI] [GO:0045766 "positive regulation of
angiogenesis" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=ISO;IGI;IDA;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment" evidence=IGI]
[GO:0048665 "neuron fate specification" evidence=IMP] [GO:0048762
"mesenchymal cell differentiation" evidence=IMP] [GO:0048880
"sensory system development" evidence=IMP] [GO:0048936 "peripheral
nervous system neuron axonogenesis" evidence=IMP] [GO:0050728
"negative regulation of inflammatory response" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IGI] [GO:0060037 "pharyngeal system development"
evidence=IGI] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IMP] [GO:0060384 "innervation"
evidence=IMP] [GO:0060413 "atrial septum morphogenesis"
evidence=IGI] [GO:0060913 "cardiac cell fate determination"
evidence=ISO;IMP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IDA] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=ISO] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IGI] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101791 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0008284 GO:GO:0001755 GO:GO:0050728
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0032755
GO:GO:0010575 GO:GO:0032024 GO:GO:0003700 GO:GO:0045766
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0032731
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0021559
GO:GO:0001158 GO:GO:0042517 GO:GO:0032729 GO:GO:0032760
GeneTree:ENSGT00700000104050 GO:GO:0031103 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0032730 GO:GO:0032735 GO:GO:0071657 GO:GO:0060413
GO:GO:0003266 eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 GO:GO:0032725 CTD:3670
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OMA:TDMGDMG
OrthoDB:EOG4G4GQR GO:GO:0048936 GO:GO:0060913 GO:GO:0060379
GO:GO:0048880 GO:GO:0021524 EMBL:AJ132765 EMBL:AB104633
IPI:IPI00121604 IPI:IPI00415262 RefSeq:NP_067434.3 UniGene:Mm.42242
PDB:2RGT PDBsum:2RGT ProteinModelPortal:P61372 SMR:P61372
MINT:MINT-4594016 STRING:P61372 PhosphoSite:P61372 PRIDE:P61372
Ensembl:ENSMUST00000036060 Ensembl:ENSMUST00000176044 GeneID:16392
KEGG:mmu:16392 UCSC:uc007ryf.2 InParanoid:P61372
EvolutionaryTrace:P61372 NextBio:289537 Bgee:P61372 CleanEx:MM_ISL1
Genevestigator:P61372 GermOnline:ENSMUSG00000042258 Uniprot:P61372
Length = 349
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>RGD|61957 [details] [associations]
symbol:Isl1 "ISL LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA;ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA;ISO] [GO:0001158 "enhancer
sequence-specific DNA binding" evidence=IEA;ISO] [GO:0001755 "neural
crest cell migration" evidence=IEA;ISO] [GO:0003007 "heart
morphogenesis" evidence=ISO] [GO:0003139 "secondary heart field
specification" evidence=IEA;ISO] [GO:0003148 "outflow tract septum
morphogenesis" evidence=IEA;ISO] [GO:0003151 "outflow tract
morphogenesis" evidence=ISO] [GO:0003203 "endocardial cushion
morphogenesis" evidence=IEA;ISO] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA;ISO] [GO:0003266 "regulation
of secondary heart field cardioblast proliferation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=ISO]
[GO:0003682 "chromatin binding" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0007507 "heart development"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA;ISO] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0010575 "positive regulation vascular endothelial
growth factor production" evidence=IEA;ISO] [GO:0016922
"ligand-dependent nuclear receptor binding" evidence=IDA;IPI]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0021559 "trigeminal nerve
development" evidence=IEA;ISO] [GO:0021983 "pituitary gland
development" evidence=IEA;ISO] [GO:0030182 "neuron differentiation"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0031016 "pancreas development" evidence=IEA;ISO] [GO:0031103
"axon regeneration" evidence=IEP] [GO:0031290 "retinal ganglion cell
axon guidance" evidence=IEA;ISO] [GO:0032024 "positive regulation of
insulin secretion" evidence=IMP] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA;ISO] [GO:0032729 "positive regulation of
interferon-gamma production" evidence=IEA;ISO] [GO:0032730 "positive
regulation of interleukin-1 alpha production" evidence=IEA;ISO]
[GO:0032731 "positive regulation of interleukin-1 beta production"
evidence=IEA;ISO] [GO:0032735 "positive regulation of interleukin-12
production" evidence=IEA;ISO] [GO:0032755 "positive regulation of
interleukin-6 production" evidence=IEA;ISO] [GO:0032760 "positive
regulation of tumor necrosis factor production" evidence=IEA;ISO]
[GO:0033147 "negative regulation of intracellular estrogen receptor
signaling pathway" evidence=IDA] [GO:0042517 "positive regulation of
tyrosine phosphorylation of Stat3 protein" evidence=IEA;ISO]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA;ISO]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA;ISO]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0045766 "positive regulation
of angiogenesis" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0048663 "neuron fate commitment" evidence=ISO] [GO:0048665
"neuron fate specification" evidence=ISO] [GO:0048762 "mesenchymal
cell differentiation" evidence=ISO] [GO:0048880 "sensory system
development" evidence=IEA;ISO] [GO:0048936 "peripheral nervous
system neuron axonogenesis" evidence=IEA;ISO] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060037 "pharyngeal system development" evidence=IEA;ISO]
[GO:0060379 "cardiac muscle cell myoblast differentiation"
evidence=IEA;ISO] [GO:0060384 "innervation" evidence=IEA;ISO]
[GO:0060413 "atrial septum morphogenesis" evidence=IEA;ISO]
[GO:0060913 "cardiac cell fate determination" evidence=IEA;ISO]
[GO:0071385 "cellular response to glucocorticoid stimulus"
evidence=IEP] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA;ISO] [GO:0090074
"negative regulation of protein homodimerization activity"
evidence=IDA] [GO:0090090 "negative regulation of canonical Wnt
receptor signaling pathway" evidence=IEA;ISO] [GO:1901258 "positive
regulation of macrophage colony-stimulating factor production"
evidence=ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:61957 GO:GO:0005634 GO:GO:0046872 GO:GO:0008284
GO:GO:0001755 GO:GO:0043565 GO:GO:0008270 GO:GO:0071385
GO:GO:0045944 GO:GO:0045665 GO:GO:0043524 GO:GO:0032024
GO:GO:0003700 GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090
GO:GO:0031016 GO:GO:0021983 GO:GO:0001105 GO:GO:0030331
GO:GO:0021559 GO:GO:0001158 GO:GO:0042517
GeneTree:ENSGT00700000104050 GO:GO:0016922 GO:GO:0031103
GO:GO:0055010 GO:GO:0003203 GO:GO:0003139 GO:GO:0031290
GO:GO:0043388 GO:GO:0060413 GO:GO:0033147 GO:GO:0003266
eggNOG:COG5576 GO:GO:0003148 GO:GO:0003215 GO:GO:0060384
GO:GO:0021520 CTD:3670 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OMA:TDMGDMG OrthoDB:EOG4G4GQR GO:GO:0048936
GO:GO:0060913 GO:GO:0060379 GO:GO:0090074 GO:GO:0048880
GO:GO:0021524 EMBL:S69329 EMBL:AY557632 EMBL:X53258 IPI:IPI00201439
IPI:IPI00417237 PIR:I67417 RefSeq:NP_059035.3 UniGene:Rn.36202
ProteinModelPortal:P61374 SMR:P61374 STRING:P61374
PhosphoSite:P61374 PRIDE:P61374 Ensembl:ENSRNOT00000017305
GeneID:64444 KEGG:rno:64444 InParanoid:P61374 NextBio:613174
Genevestigator:P61374 GermOnline:ENSRNOG00000012556 Uniprot:P61374
Length = 349
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>ZFIN|ZDB-GENE-980526-112 [details] [associations]
symbol:isl1 "islet1" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IMP]
[GO:0031017 "exocrine pancreas development" evidence=IMP]
[GO:0048665 "neuron fate specification" evidence=IGI;IMP]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0055011 "atrial cardiac muscle cell differentiation"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-112 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0048665
GeneTree:ENSGT00700000104050 GO:GO:0031017 eggNOG:COG5576 CTD:3670
HOVERGEN:HBG004671 KO:K09370 EMBL:D21135 EMBL:AL954694
EMBL:BC060892 IPI:IPI00487340 PIR:I51739 RefSeq:NP_571037.1
UniGene:Dr.75106 ProteinModelPortal:P53405 SMR:P53405 STRING:P53405
Ensembl:ENSDART00000010896 GeneID:30147 KEGG:dre:30147
HOGENOM:HOG000236304 InParanoid:A2AWM5 OMA:TDMGDMG
OrthoDB:EOG4G4GQR NextBio:20806622 Bgee:P53405 GO:GO:0055011
GO:GO:0048936 Uniprot:P53405
Length = 349
Score = 180 (68.4 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCNIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 131 (51.2 bits), Expect = 5.0e-08, P = 5.0e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 71
>MGI|MGI:1888519 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10090 "Mus musculus" [GO:0001558 "regulation of cell
growth" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0007420
"brain development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0021542 "dentate gyrus development" evidence=IMP]
[GO:0021549 "cerebellum development" evidence=IMP] [GO:0021766
"hippocampus development" evidence=IMP] [GO:0021953 "central
nervous system neuron differentiation" evidence=IMP] [GO:0030182
"neuron differentiation" evidence=IMP] [GO:0030901 "midbrain
development" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1888519 GO:GO:0005634 GO:GO:0007411
GO:GO:0001558 GO:GO:0046872 GO:GO:0071542 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021549
GO:GO:0030901 GO:GO:0010468 GeneTree:ENSGT00700000104050
GO:GO:0021542 HOGENOM:HOG000231629 GO:GO:0021953 CTD:4009
eggNOG:NOG243427 HOVERGEN:HBG052335 KO:K09371 OMA:GNAGMEG
OrthoDB:EOG4QFWDN EMBL:AF226662 IPI:IPI00123446 RefSeq:NP_387501.1
UniGene:Mm.330081 ProteinModelPortal:Q9JKU8 SMR:Q9JKU8
STRING:Q9JKU8 PhosphoSite:Q9JKU8 PRIDE:Q9JKU8
Ensembl:ENSMUST00000028003 Ensembl:ENSMUST00000111377 GeneID:110648
KEGG:mmu:110648 InParanoid:Q9JKU8 NextBio:364391 Bgee:Q9JKU8
CleanEx:MM_LMX1A Genevestigator:Q9JKU8
GermOnline:ENSMUSG00000026686 Uniprot:Q9JKU8
Length = 382
Score = 181 (68.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>RGD|1304784 [details] [associations]
symbol:Lmx1a "LIM homeobox transcription factor 1 alpha"
species:10116 "Rattus norvegicus" [GO:0001558 "regulation of cell
growth" evidence=IEA;ISO] [GO:0003674 "molecular_function"
evidence=ND] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA;ISO]
[GO:0007417 "central nervous system development" evidence=ISO]
[GO:0007420 "brain development" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=ISO] [GO:0021542 "dentate gyrus development"
evidence=IEA;ISO] [GO:0021549 "cerebellum development"
evidence=IEA;ISO] [GO:0021766 "hippocampus development"
evidence=ISO] [GO:0021953 "central nervous system neuron
differentiation" evidence=IEA;ISO] [GO:0030182 "neuron
differentiation" evidence=ISO] [GO:0030901 "midbrain development"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IEA;ISO] [GO:0071542 "dopaminergic neuron
differentiation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 RGD:1304784
GO:GO:0005634 GO:GO:0007411 GO:GO:0007420 GO:GO:0001558
GO:GO:0046872 GO:GO:0071542 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021549 GO:GO:0030901
GeneTree:ENSGT00700000104050 GO:GO:0021542 GO:GO:0021953 CTD:4009
KO:K09371 OMA:GNAGMEG IPI:IPI00869778 RefSeq:NP_001099437.2
UniGene:Rn.137284 Ensembl:ENSRNOT00000006163 GeneID:289201
KEGG:rno:289201 NextBio:629386 ArrayExpress:F1LRJ8 Uniprot:F1LRJ8
Length = 382
Score = 181 (68.8 bits), Expect = 2.0e-13, P = 2.0e-13
Identities = 37/129 (28%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ +
Sbjct: 35 CEGCQRVISDRFLLRLNDSFWHEQCVQCASCKEPLETTCFYRDKKLYCKYHY-------- 86
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
+ C GC + I ++F++ + +H C C C L D+ +E
Sbjct: 87 -------EKLFAVKCGGCFEAIAPNEFVMRAQKSVYHLSCFCCCVCERQLQKGDEFVLKE 139
Query: 122 GKLFCRNDF 130
G+L C+ D+
Sbjct: 140 GQLLCKGDY 148
>UNIPROTKB|F1PP21 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:TDMGDMG EMBL:AAEX03003122
Ensembl:ENSCAFT00000029303 Uniprot:F1PP21
Length = 360
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 23 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 82
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 83 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 128
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 129 EFALREDGLFCRAD 142
Score = 131 (51.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 23 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 81
>UNIPROTKB|F1SMF7 [details] [associations]
symbol:ISL1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0071657 "positive regulation of granulocyte
colony-stimulating factor production" evidence=IEA] [GO:0060913
"cardiac cell fate determination" evidence=IEA] [GO:0060413 "atrial
septum morphogenesis" evidence=IEA] [GO:0060384 "innervation"
evidence=IEA] [GO:0060379 "cardiac muscle cell myoblast
differentiation" evidence=IEA] [GO:0060037 "pharyngeal system
development" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] [GO:0050728 "negative
regulation of inflammatory response" evidence=IEA] [GO:0048936
"peripheral nervous system neuron axonogenesis" evidence=IEA]
[GO:0048880 "sensory system development" evidence=IEA] [GO:0045766
"positive regulation of angiogenesis" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0043524 "negative regulation of neuron apoptotic process"
evidence=IEA] [GO:0043425 "bHLH transcription factor binding"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0042517 "positive regulation of tyrosine
phosphorylation of Stat3 protein" evidence=IEA] [GO:0032760
"positive regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032755 "positive regulation of interleukin-6
production" evidence=IEA] [GO:0032735 "positive regulation of
interleukin-12 production" evidence=IEA] [GO:0032731 "positive
regulation of interleukin-1 beta production" evidence=IEA]
[GO:0032730 "positive regulation of interleukin-1 alpha production"
evidence=IEA] [GO:0032729 "positive regulation of interferon-gamma
production" evidence=IEA] [GO:0032725 "positive regulation of
granulocyte macrophage colony-stimulating factor production"
evidence=IEA] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IEA] [GO:0031016 "pancreas development" evidence=IEA]
[GO:0021983 "pituitary gland development" evidence=IEA] [GO:0021559
"trigeminal nerve development" evidence=IEA] [GO:0021524 "visceral
motor neuron differentiation" evidence=IEA] [GO:0021520 "spinal
cord motor neuron cell fate specification" evidence=IEA]
[GO:0010575 "positive regulation vascular endothelial growth factor
production" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003266 "regulation of secondary heart field
cardioblast proliferation" evidence=IEA] [GO:0003215 "cardiac right
ventricle morphogenesis" evidence=IEA] [GO:0003203 "endocardial
cushion morphogenesis" evidence=IEA] [GO:0003148 "outflow tract
septum morphogenesis" evidence=IEA] [GO:0003139 "secondary heart
field specification" evidence=IEA] [GO:0001755 "neural crest cell
migration" evidence=IEA] [GO:0001158 "enhancer sequence-specific
DNA binding" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0008284 GO:GO:0001755
GO:GO:0008270 GO:GO:0045665 GO:GO:0043524 GO:GO:0003700
GO:GO:0003682 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0060037 GO:GO:0090090 GO:GO:0031016
GO:GO:0021983 GO:GO:0001105 GO:GO:0021559 GO:GO:0001158
GO:GO:0042517 GeneTree:ENSGT00700000104050 GO:GO:0055010
GO:GO:0003203 GO:GO:0003139 GO:GO:0031290 GO:GO:0043388
GO:GO:0060413 GO:GO:0003266 GO:GO:0003148 GO:GO:0003215
GO:GO:0060384 GO:GO:0021520 OMA:TDMGDMG GO:GO:0048936 GO:GO:0060913
GO:GO:0060379 GO:GO:0048880 GO:GO:0021524 EMBL:CU915536
Ensembl:ENSSSCT00000018387 Uniprot:F1SMF7
Length = 361
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 25 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDYI 84
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 85 RLYGIKCAKCSIGFSKN--------------DFVMRARSKVYHIECFRCVACSRQLIPGD 130
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 131 EFALREDGLFCRAD 144
Score = 131 (51.2 bits), Expect = 5.3e-08, P = 5.3e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 25 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDESCTCFVRDGKTYCKRDY 83
>UNIPROTKB|P50211 [details] [associations]
symbol:ISL1 "Insulin gene enhancer protein ISL-1"
species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:L35567
IPI:IPI00598855 PIR:I50369 RefSeq:NP_990745.1 UniGene:Gga.1507
ProteinModelPortal:P50211 SMR:P50211 GeneID:396383 KEGG:gga:396383
CTD:3670 HOVERGEN:HBG004671 KO:K09370 NextBio:20816425
Uniprot:P50211
Length = 349
Score = 178 (67.7 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 43/134 (32%), Positives = 65/134 (48%)
Query: 2 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFF 57
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDYI 72
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
R + C +G S + F++ + +H +C RC C L D
Sbjct: 73 RLYGIKCAKCSIGFSKN--------------DFVMRARAKVYHIECFRCVACSRQLIPGD 118
Query: 116 KCFSREGKLFCRND 129
+ RE LFCR D
Sbjct: 119 EFALREDGLFCRAD 132
Score = 130 (50.8 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 76 LIS-CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
LIS C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 13 LISLCVGCGNQIHDQYILRVSPDLEWHAACLKCAECNQYLDETCTCFVRDGKTYCKRDY 71
>FB|FBgn0000099 [details] [associations]
symbol:ap "apterous" species:7227 "Drosophila melanogaster"
[GO:0007559 "histolysis" evidence=IMP] [GO:0005634 "nucleus"
evidence=NAS;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IDA] [GO:0007472 "wing disc
morphogenesis" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA;NAS] [GO:0007481 "haltere disc morphogenesis"
evidence=NAS] [GO:0006351 "transcription, DNA-dependent"
evidence=IMP;TAS] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0007399 "nervous system development" evidence=IMP;TAS]
[GO:0007517 "muscle organ development" evidence=IMP;TAS]
[GO:0007479 "leg disc proximal/distal pattern formation"
evidence=IMP] [GO:0045165 "cell fate commitment" evidence=NAS]
[GO:0048190 "wing disc dorsal/ventral pattern formation"
evidence=IGI;IMP;TAS] [GO:0007451 "dorsal/ventral lineage
restriction, imaginal disc" evidence=TAS] [GO:0007476 "imaginal
disc-derived wing morphogenesis" evidence=TAS] [GO:0007450
"dorsal/ventral pattern formation, imaginal disc" evidence=TAS]
[GO:0036011 "imaginal disc-derived leg segmentation" evidence=IMP]
[GO:0035218 "leg disc development" evidence=IMP] [GO:0007526
"larval somatic muscle development" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
EMBL:AE013599 GO:GO:0005634 GO:GO:0007411 GO:GO:0048190
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0007526 GO:GO:0007476 EMBL:X65158 EMBL:M92841
EMBL:AY069815 EMBL:BT005201 PIR:JH0718 RefSeq:NP_001163058.1
RefSeq:NP_001163059.1 RefSeq:NP_523621.2 RefSeq:NP_724428.1
UniGene:Dm.4746 ProteinModelPortal:P29673 SMR:P29673 DIP:DIP-23617N
IntAct:P29673 MINT:MINT-338208 STRING:P29673 PaxDb:P29673
PRIDE:P29673 EnsemblMetazoa:FBtr0086058 GeneID:35509
KEGG:dme:Dmel_CG8376 UCSC:CG8376-RA CTD:11763 FlyBase:FBgn0000099
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 InParanoid:P29673
KO:K09373 OMA:THYSIAR OrthoDB:EOG46Q57V PhylomeDB:P29673 ChiTaRS:ap
GenomeRNAi:35509 NextBio:793761 Bgee:P29673 GermOnline:CG8376
GO:GO:0000977 GO:GO:0045165 GO:GO:0007451 GO:GO:0007559
GO:GO:0036011 GO:GO:0007479 Uniprot:P29673
Length = 469
Score = 181 (68.8 bits), Expect = 3.3e-13, P = 3.3e-13
Identities = 41/134 (30%), Positives = 69/134 (51%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFFRS 59
L C+GC + I D+F L+ +E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 145 LDDCSGCGRQIQDRFYLSAVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYYSF 204
Query: 60 -PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DK 116
R S C +SS+ L+ A N++ +H +C C CH L+ D+
Sbjct: 205 FGTRRCSRCLASISSNELVMRAR-----------NLV---FHVNCFCCTVCHTPLTKGDQ 250
Query: 117 CFSREGKLFCRNDF 130
+ ++CR +
Sbjct: 251 YGIIDALIYCRTHY 264
Score = 166 (63.5 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 34/100 (34%), Positives = 52/100 (52%)
Query: 34 DCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLN 93
DC +SD+ S G F F P P + L C+GC + I D+F L+
Sbjct: 108 DCTE-VSDETTS--GISFKTEPF--GPPSSPESTSDSKITRNLDDCSGCGRQIQDRFYLS 162
Query: 94 VLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFF 131
+E+ WHA C++CY C L C+SR+G ++C+ND++
Sbjct: 163 AVEKRWHASCLQCYACRQPLERESSCYSRDGNIYCKNDYY 202
>UNIPROTKB|H0YKY2 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0021524 "visceral motor neuron differentiation" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
GO:GO:0045665 GO:GO:0005622 Gene3D:2.10.110.10 GO:GO:0031290
EMBL:AC027243 GO:GO:0021520 GO:GO:0021524 HGNC:HGNC:18524
Ensembl:ENST00000558437 Bgee:H0YKY2 Uniprot:H0YKY2
Length = 145
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 2 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 61
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 62 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 107
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 108 REHELLCRAD 117
Score = 128 (50.1 bits), Expect = 2.0e-08, P = 2.0e-08
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 2 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 56
>FB|FBgn0050178 [details] [associations]
symbol:CG30178 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HSSP:Q05158 GeneTree:ENSGT00690000101670 RefSeq:NP_726395.1
UniGene:Dm.29107 ProteinModelPortal:Q8MLQ2 SMR:Q8MLQ2 PRIDE:Q8MLQ2
EnsemblMetazoa:FBtr0072159 GeneID:246501 KEGG:dme:Dmel_CG30178
UCSC:CG30178-RA FlyBase:FBgn0050178 InParanoid:Q8MLQ2 OMA:WHEKCFR
OrthoDB:EOG4ZS7K7 PhylomeDB:Q8MLQ2 GenomeRNAi:246501 NextBio:842709
ArrayExpress:Q8MLQ2 Bgee:Q8MLQ2 Uniprot:Q8MLQ2
Length = 187
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 46/124 (37%), Positives = 59/124 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
C+ C PIL++ + ER WH C RC C +L S F G LFC+ F R
Sbjct: 65 CSACRTPILERGVA-AAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHF-RE---- 118
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
L SS CAGCEKPI D+ + L WHA C +C+ C +S + F E G
Sbjct: 119 -------LFSSR---CAGCEKPI-DRRAVVALSTKWHAKCFKCHHCRKRISAREFWIENG 167
Query: 123 KLFC 126
+ C
Sbjct: 168 QPIC 171
Score = 109 (43.4 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 34/128 (26%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C + I + + + L +T+H C +C + K F + + + C
Sbjct: 6 CCRCNEKIWPRAVCS-LGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVC----------- 53
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREG 122
S C + ++ C+ C PIL++ + ER WH C RC C +L S F G
Sbjct: 54 -SECYLDKHAAR---CSACRTPILERGVA-AAERKWHEKCFRCVSCSKSLVSASFFEVNG 108
Query: 123 KLFCRNDF 130
LFC+ F
Sbjct: 109 YLFCKAHF 116
>UNIPROTKB|Q9YH16 [details] [associations]
symbol:lmo3 "LIM domain only protein 3" species:8355
"Xenopus laevis" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 HSSP:P61969 HOVERGEN:HBG054231
EMBL:U94991 EMBL:BC079734 RefSeq:NP_001084116.1 UniGene:Xl.6611
ProteinModelPortal:Q9YH16 SMR:Q9YH16 GeneID:399311 KEGG:xla:399311
CTD:399311 Xenbase:XB-GENE-6254052 Uniprot:Q9YH16
Length = 156
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ E +H DC C C+ + DK F
Sbjct: 82 -------FGVTGN----CAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQTDY 142
>ZFIN|ZDB-GENE-050522-201 [details] [associations]
symbol:lmo3 "LIM domain only 3" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-050522-201 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OMA:HTEIGIY EMBL:AL954848
IPI:IPI00855464 UniGene:Dr.85219 SMR:B0R1F5
Ensembl:ENSDART00000112860 Uniprot:B0R1F5
Length = 167
Score = 172 (65.6 bits), Expect = 4.4e-13, P = 4.4e-13
Identities = 37/132 (28%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 35 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 92
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ E +H DC C C+ + DK F
Sbjct: 93 -------FGVTGN----CAACSKLIPAFEMVMRAKENVYHLDCFACQLCNQRFCVGDKFF 141
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 142 LKNNMILCQTDY 153
>UNIPROTKB|A2I8Z7 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:223369
"Astyanax fasciatus" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:EF175738
ProteinModelPortal:A2I8Z7 Uniprot:A2I8Z7
Length = 377
Score = 177 (67.4 bits), Expect = 5.3e-13, P = 5.3e-13
Identities = 36/131 (27%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 112 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCTSCNKTLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
RE ++CR F
Sbjct: 158 RENLVYCRAHF 168
Score = 132 (51.5 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 106
>ZFIN|ZDB-GENE-010702-1 [details] [associations]
symbol:lmo4a "LIM domain only 4a" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0030900 "forebrain
development" evidence=IMP;IDA] [GO:0031076 "embryonic camera-type
eye development" evidence=IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-010702-1 GO:GO:0046872
GO:GO:0008270 GO:GO:0030900 Gene3D:2.10.110.10 GO:GO:0031076
GeneTree:ENSGT00700000104177 HSSP:P70662 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OMA:DRYWHTR EMBL:CR855258
EMBL:BC045835 EMBL:AY028903 IPI:IPI00495249 RefSeq:NP_817093.1
UniGene:Dr.107376 SMR:Q8QG63 STRING:Q8QG63
Ensembl:ENSDART00000085219 GeneID:114412 KEGG:dre:114412 CTD:114412
InParanoid:Q8QG63 OrthoDB:EOG4T4CWR NextBio:20796903 Uniprot:Q8QG63
Length = 167
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 41/132 (31%), Positives = 61/132 (46%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL ++R WH C++C C L + CFS+ G + CRND+ R
Sbjct: 23 SCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGEIGSTCFSKGGMILCRNDYIRL- 81
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 82 --------FGHSGA----CSACGQSIPASEMVMRAQGNVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGTIFCEHD 141
Score = 141 (54.7 bits), Expect = 8.4e-10, P = 8.4e-10
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFC 126
G S + SCAGC I D+FLL ++R WH C++C C L + CFS+ G + C
Sbjct: 15 GGSGGAVRSCAGCGGRISDRFLLFSMDRYWHTRCLKCSCCQAQLGEIGSTCFSKGGMILC 74
Query: 127 RNDF 130
RND+
Sbjct: 75 RNDY 78
>UNIPROTKB|Q5FVB2 [details] [associations]
symbol:lmo4.1 "LIM domain transcription factor LMO4.1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC090104 RefSeq:NP_001015822.1
UniGene:Str.52903 ProteinModelPortal:Q5FVB2 SMR:Q5FVB2
Ensembl:ENSXETT00000050669 GeneID:548539 KEGG:xtr:548539 CTD:548539
Xenbase:XB-GENE-479327 eggNOG:NOG314117 InParanoid:Q5FVB2
OMA:DRYWHTR OrthoDB:EOG4XKV82 Bgee:Q5FVB2 Uniprot:Q5FVB2
Length = 167
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/132 (29%), Positives = 61/132 (46%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
+CAGC I D+FLL +ER WH C++C C L + C+++ G + CRND+ R
Sbjct: 23 ACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL- 81
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 82 --------FGSSGA----CSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGAIFCEHD 141
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 23/56 (41%), Positives = 34/56 (60%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
+CAGC I D+FLL +ER WH C++C C L + C+++ G + CRND+
Sbjct: 23 ACAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 78
>UNIPROTKB|E1BYB0 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02012827 EMBL:AADN02012828
IPI:IPI00819278 Ensembl:ENSGALT00000010105 ArrayExpress:E1BYB0
Uniprot:E1BYB0
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>UNIPROTKB|F1P113 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0006366 GO:GO:0001158 GO:GO:0042659
GeneTree:ENSGT00700000104177 OMA:ALSWKRC GO:GO:0050865
EMBL:AADN02012827 EMBL:AADN02012828 IPI:IPI00582860
Ensembl:ENSGALT00000033333 ArrayExpress:F1P113 Uniprot:F1P113
Length = 174
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 32 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 89
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 90 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 138
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 139 YINGSLFCEHD 149
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 32 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 86
>UNIPROTKB|Q3SWZ8 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9913 "Bos taurus" [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042659
"regulation of cell fate specification" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003281 "ventricular septum development" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0001158 GO:GO:0021527 GO:GO:0042659
GO:GO:0003281 GO:GO:0021514 GeneTree:ENSGT00700000104177
HOGENOM:HOG000232175 HOVERGEN:HBG054231 eggNOG:NOG314117
OrthoDB:EOG4XKV82 OMA:ALSWKRC EMBL:BC104582 IPI:IPI00705980
RefSeq:NP_001029923.1 UniGene:Bt.3730 ProteinModelPortal:Q3SWZ8
SMR:Q3SWZ8 PRIDE:Q3SWZ8 Ensembl:ENSBTAT00000000389 GeneID:614212
KEGG:bta:614212 CTD:8543 InParanoid:Q3SWZ8 NextBio:20898998
GO:GO:0050865 Uniprot:Q3SWZ8
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>UNIPROTKB|E2QSI3 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050865 "regulation of cell activation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042659 "regulation of
cell fate specification" evidence=IEA] [GO:0031333 "negative
regulation of protein complex assembly" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0001158
GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 OMA:ALSWKRC CTD:8543 GO:GO:0050865
EMBL:AAEX03004843 EMBL:AAEX03004844 RefSeq:XP_003434840.1
RefSeq:XP_537086.1 RefSeq:XP_867313.1 SMR:E2QSI3
Ensembl:ENSCAFT00000036423 GeneID:479962 KEGG:cfa:479962
NextBio:20855066 Uniprot:E2QSI3
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>UNIPROTKB|P61968 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 Pathway_Interaction_DB:il6_7pathway GO:GO:0003700
EMBL:CH471097 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0008134
GO:GO:0001158 GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 PDB:2L4Z
PDBsum:2L4Z GO:GO:0021514 HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 EMBL:U24576 EMBL:BC003600 EMBL:BC017673 EMBL:BC065818
IPI:IPI00297604 RefSeq:NP_006760.1 UniGene:Hs.436792
ProteinModelPortal:P61968 SMR:P61968 IntAct:P61968 MINT:MINT-265427
STRING:P61968 DMDM:48428992 PRIDE:P61968 Ensembl:ENST00000370542
Ensembl:ENST00000370544 GeneID:8543 KEGG:hsa:8543 UCSC:uc001dmi.3
GeneCards:GC01P087794 HGNC:HGNC:6644 HPA:CAB022345 MIM:603129
neXtProt:NX_P61968 PharmGKB:PA30410 InParanoid:P61968
PhylomeDB:P61968 ChiTaRS:LMO4 EvolutionaryTrace:P61968
GenomeRNAi:8543 NextBio:32002 Bgee:P61968 CleanEx:HS_LMO4
Genevestigator:P61968 GermOnline:ENSG00000143013 Uniprot:P61968
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>UNIPROTKB|A9ED91 [details] [associations]
symbol:LMO4 "LIM domain only 4" species:9823 "Sus scrofa"
[GO:0050865 "regulation of cell activation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0042659 "regulation of cell fate
specification" evidence=IEA] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEA]
[GO:0021514 "ventral spinal cord interneuron differentiation"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC
CTD:8543 GO:GO:0050865 EMBL:CU550656 EMBL:AB304401
RefSeq:NP_001106156.1 UniGene:Ssc.9714 ProteinModelPortal:A9ED91
SMR:A9ED91 STRING:A9ED91 PRIDE:A9ED91 Ensembl:ENSSSCT00000007590
GeneID:100127155 KEGG:ssc:100127155 Uniprot:A9ED91
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>MGI|MGI:109360 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10090 "Mus musculus"
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0001843 "neural tube closure" evidence=IMP] [GO:0003281
"ventricular septum development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IDA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IDA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0031333
"negative regulation of protein complex assembly" evidence=IDA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI] [GO:0050865 "regulation of cell activation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:109360 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0008134 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514 PDB:1M3V PDB:1RUT
PDBsum:1M3V PDBsum:1RUT HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 ChiTaRS:LMO4 EMBL:AF074600 EMBL:AF102817
EMBL:AF096996 EMBL:BC003488 EMBL:BC004661 EMBL:BC010278
IPI:IPI00281974 RefSeq:NP_001155241.1 RefSeq:NP_001155242.1
RefSeq:NP_034853.1 UniGene:Mm.29187 PDB:2DFY PDBsum:2DFY
ProteinModelPortal:P61969 SMR:P61969 STRING:P61969 PRIDE:P61969
Ensembl:ENSMUST00000120539 Ensembl:ENSMUST00000121112
Ensembl:ENSMUST00000121796 GeneID:16911 KEGG:mmu:16911
InParanoid:P61969 EvolutionaryTrace:P61969 NextBio:290952
Bgee:P61969 CleanEx:MM_LMO4 Genevestigator:P61969 Uniprot:P61969
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>RGD|1305670 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10116 "Rattus
norvegicus" [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0003281 "ventricular septum development"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA;ISO] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA;ISO] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA;ISO] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0042659 "regulation of cell fate specification"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048538
"thymus development" evidence=IEA;ISO] [GO:0050865 "regulation of
cell activation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305670
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 EMBL:CH473952 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 CTD:8543
GO:GO:0050865 EMBL:BC087700 IPI:IPI00202852 RefSeq:NP_001009708.1
UniGene:Rn.2517 SMR:Q5PPG8 STRING:Q5PPG8 Ensembl:ENSRNOT00000067502
GeneID:362051 KEGG:rno:362051 UCSC:RGD:1305670 InParanoid:Q5PPG8
NextBio:678516 Genevestigator:Q5PPG8 Uniprot:Q5PPG8
Length = 165
Score = 171 (65.3 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 39/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L D C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDY 77
>FB|FBgn0051624 [details] [associations]
symbol:CG31624 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 FlyBase:FBgn0051624
EMBL:BT015299 ProteinModelPortal:Q6AWE9 SMR:Q6AWE9 STRING:Q6AWE9
PRIDE:Q6AWE9 InParanoid:Q6AWE9 ArrayExpress:Q6AWE9 Bgee:Q6AWE9
Uniprot:Q6AWE9
Length = 178
Score = 170 (64.9 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/126 (32%), Positives = 62/126 (49%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+CAGC+KPIL+K + + ER WH C C C L+ + F R+GK +C+ D+
Sbjct: 65 TCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYERDGKPYCKQDY----- 118
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA CEKPI D +L + WH +C +C C + ++ + F+ +
Sbjct: 119 ----------EDLFAARCAKCEKPITDSAVL-AMNVKWHRNCFQCNKCENPITSQTFTID 167
Query: 122 G-KLFC 126
G K C
Sbjct: 168 GDKPVC 173
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 40/131 (30%), Positives = 63/131 (48%)
Query: 3 ISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPV 61
I C C++ I K ++ L +TWH + C+ C + D F+ + G+ C F
Sbjct: 5 IVCHKCQEAIT-KRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEPVCNKCFVE--- 60
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-S 119
R+ +CAGC+KPIL+K + + ER WH C C C L+ + F
Sbjct: 61 RYT------------YTCAGCKKPILEKTICAMGER-WHEACFCCGGACKKPLASQTFYE 107
Query: 120 REGKLFCRNDF 130
R+GK +C+ D+
Sbjct: 108 RDGKPYCKQDY 118
>UNIPROTKB|F1NBH3 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:HTEIGIY EMBL:AADN02006566
EMBL:AADN02006567 EMBL:AADN02006568 IPI:IPI00590236
Ensembl:ENSGALT00000009596 Uniprot:F1NBH3
Length = 147
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 15 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 72
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 73 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 121
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 122 LKNNMILCQTDY 133
>UNIPROTKB|Q2KIA3 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BC112712 IPI:IPI00722914 RefSeq:NP_001039802.1
UniGene:Bt.97510 ProteinModelPortal:Q2KIA3 SMR:Q2KIA3
Ensembl:ENSBTAT00000043044 GeneID:532870 KEGG:bta:532870 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
InParanoid:Q2KIA3 OMA:HTEIGIY OrthoDB:EOG405S2K NextBio:20875832
Uniprot:Q2KIA3
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>UNIPROTKB|E2RHK8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
RefSeq:XP_003433617.1 ProteinModelPortal:E2RHK8
Ensembl:ENSCAFT00000020038 GeneID:486662 KEGG:cfa:486662
Uniprot:E2RHK8
Length = 156
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQTDY 142
>UNIPROTKB|J9NZN8 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 OMA:HTEIGIY
EMBL:AAEX03015233 GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866550.2
Ensembl:ENSCAFT00000044444 Uniprot:J9NZN8
Length = 163
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 31 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 88
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 89 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 137
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 138 LKNNMILCQTDY 149
>UNIPROTKB|J9P4K0 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866536.1
ProteinModelPortal:J9P4K0 Ensembl:ENSCAFT00000048736 Uniprot:J9P4K0
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>UNIPROTKB|B4DG90 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:55885
HOGENOM:HOG000232175 HOVERGEN:HBG054231 EMBL:AC007529 EMBL:AC007552
RefSeq:NP_001001395.1 UniGene:Hs.504908 DNASU:55885 GeneID:55885
KEGG:hsa:55885 HGNC:HGNC:6643 GenomeRNAi:55885 NextBio:61212
EMBL:AK294474 EMBL:AK316021 IPI:IPI00910185 RefSeq:NP_001230541.1
SMR:B4DG90 STRING:B4DG90 Ensembl:ENST00000541295 UCSC:uc010shy.2
Uniprot:B4DG90
Length = 163
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 31 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 88
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 89 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 137
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 138 LKNNMILCQTDY 149
>UNIPROTKB|Q8TAP4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 EMBL:CH471094 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:AB044745 EMBL:AB044746
EMBL:AK095595 EMBL:AK294909 EMBL:AC007529 EMBL:AC007552
EMBL:BC026311 EMBL:BC050085 IPI:IPI00744307 RefSeq:NP_001001395.1
RefSeq:NP_001230538.1 RefSeq:NP_001230539.1 RefSeq:NP_001230540.1
RefSeq:NP_001230542.1 RefSeq:NP_061110.2 UniGene:Hs.504908
ProteinModelPortal:Q8TAP4 SMR:Q8TAP4 IntAct:Q8TAP4
MINT:MINT-2874669 STRING:Q8TAP4 PhosphoSite:Q8TAP4 DMDM:34098603
PRIDE:Q8TAP4 DNASU:55885 Ensembl:ENST00000261169
Ensembl:ENST00000320122 Ensembl:ENST00000354662
Ensembl:ENST00000441439 Ensembl:ENST00000447609
Ensembl:ENST00000534946 Ensembl:ENST00000535535
Ensembl:ENST00000537304 Ensembl:ENST00000540445
Ensembl:ENST00000540848 Ensembl:ENST00000541846 GeneID:55885
KEGG:hsa:55885 UCSC:uc001rdk.2 GeneCards:GC12M016701 HGNC:HGNC:6643
MIM:180386 neXtProt:NX_Q8TAP4 PharmGKB:PA30409 InParanoid:Q8TAP4
PhylomeDB:Q8TAP4 GenomeRNAi:55885 NextBio:61212 ArrayExpress:Q8TAP4
Bgee:Q8TAP4 CleanEx:HS_LMO3 Genevestigator:Q8TAP4
GermOnline:ENSG00000048540 Uniprot:Q8TAP4
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>UNIPROTKB|A9ED84 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:CU915363 EMBL:AB304400
RefSeq:NP_001106155.1 UniGene:Ssc.8086 SMR:A9ED84
Ensembl:ENSSSCT00000000642 GeneID:100127154 KEGG:ssc:100127154
eggNOG:NOG315878 Uniprot:A9ED84
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>MGI|MGI:102810 [details] [associations]
symbol:Lmo3 "LIM domain only 3" species:10090 "Mus musculus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102810 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:55885 eggNOG:NOG316748 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AK034177 EMBL:BC057086 IPI:IPI00406211 RefSeq:NP_997105.1
UniGene:Mm.490545 ProteinModelPortal:Q8BZL8 SMR:Q8BZL8
STRING:Q8BZL8 PhosphoSite:Q8BZL8 PRIDE:Q8BZL8
Ensembl:ENSMUST00000161450 Ensembl:ENSMUST00000162772
Ensembl:ENSMUST00000163024 GeneID:109593 KEGG:mmu:109593
UCSC:uc009enl.1 InParanoid:Q8BZL8 NextBio:362405 Bgee:Q8BZL8
CleanEx:MM_LMO3 Genevestigator:Q8BZL8 GermOnline:ENSMUSG00000030226
Uniprot:Q8BZL8
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>RGD|1561357 [details] [associations]
symbol:RGD1561357 "similar to LIM domain only 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:1561357 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 OMA:HTEIGIY IPI:IPI00480651
RefSeq:XP_003749911.1 ProteinModelPortal:F2Z3R1 SMR:F2Z3R1
Ensembl:ENSRNOT00000010623 GeneID:497798 KEGG:rno:497798 CTD:497798
Uniprot:F2Z3R1
Length = 145
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 36/132 (27%), Positives = 63/132 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G++ + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>ZFIN|ZDB-GENE-980526-419 [details] [associations]
symbol:lmo2 "LIM domain only 2 (rhombotin-like 1)"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0061304 "retinal blood vessel morphogenesis"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0030218 "erythrocyte
differentiation" evidence=IGI] [GO:0035162 "embryonic hemopoiesis"
evidence=IMP] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-980526-419 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0030218 GeneTree:ENSGT00680000099670
GO:GO:0035162 HSSP:P25801 GO:GO:0061304 HOGENOM:HOG000232175
HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108 KO:K15612 OMA:CEKRIRA
OrthoDB:EOG4001KG EMBL:AF191560 EMBL:CT025900 EMBL:BC093136
IPI:IPI00500159 RefSeq:NP_571186.1 UniGene:Dr.79808
ProteinModelPortal:Q9PTJ3 SMR:Q9PTJ3 STRING:Q9PTJ3
Ensembl:ENSDART00000134247 GeneID:30332 KEGG:dre:30332
InParanoid:Q567L0 NextBio:20806764 Bgee:Q9PTJ3 Uniprot:Q9PTJ3
Length = 159
Score = 169 (64.5 bits), Expect = 9.1e-13, P = 9.1e-13
Identities = 40/136 (29%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D+F L +E+ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQSIGDRFFLKAIEQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA CEK I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCEKRIRAFEMTMRVRDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D F
Sbjct: 134 RYLLINSDIVCEQDIF 149
>UNIPROTKB|I3LNC5 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] [GO:0033628 "regulation of cell
adhesion mediated by integrin" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0002102 "podosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 EMBL:CU929527 Ensembl:ENSSSCT00000031344
Uniprot:I3LNC5
Length = 316
Score = 171 (65.3 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 39/124 (31%), Positives = 59/124 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L +++TWH + C C + F ++ K +CR DF F
Sbjct: 141 CAYCAAPILDK-VLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 196
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 197 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFSSFSTGSFFELDG 243
Query: 123 KLFC 126
+ FC
Sbjct: 244 RPFC 247
Score = 155 (59.6 bits), Expect = 8.7e-11, P = 8.7e-11
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L + WH + C C + S F R G +C D+
Sbjct: 82 CASCQKPIAGK-MIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHH----- 135
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PILDK +L +++TWH + C C + F ++
Sbjct: 136 -------LFSPR---CAYCAAPILDK-VLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDK 184
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 185 KPYCRKDF 192
Score = 117 (46.2 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 23/78 (29%), Positives = 38/78 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC + +
Sbjct: 200 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFSSFSTGSFFELDGRPFCELHYHQRRGTL 258
Query: 64 PSGCGVGLSSSMLISCAG 81
GCG ++ IS G
Sbjct: 259 CHGCGQPITGRC-ISAMG 275
>UNIPROTKB|Q6DJ06 [details] [associations]
symbol:lmo4.2 "LIM domain transcription factor LMO4.2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 EMBL:CR760333 EMBL:BC075379
RefSeq:NP_001004922.1 UniGene:Str.145 ProteinModelPortal:Q6DJ06
SMR:Q6DJ06 Ensembl:ENSXETT00000053847 GeneID:448304 KEGG:xtr:448304
CTD:447751 Xenbase:XB-GENE-971939 InParanoid:Q6DJ06 OMA:ALSWKRC
Bgee:Q6DJ06 Uniprot:Q6DJ06
Length = 165
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L + C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 131 (51.2 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 21/55 (38%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC I D+FLL ++ WH+ C++C C L + C+++ G + CRND+
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 77
>RGD|621166 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:621166
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:2.10.110.10 eggNOG:NOG316748 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K EMBL:AF353304 IPI:IPI00197708
UniGene:Rn.25503 ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5
UCSC:RGD:621166 InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>UNIPROTKB|Q99MB5 [details] [associations]
symbol:Lmo3 "LIM domain only protein 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:621166 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 eggNOG:NOG316748
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AF353304 IPI:IPI00197708 UniGene:Rn.25503
ProteinModelPortal:Q99MB5 SMR:Q99MB5 STRING:Q99MB5 UCSC:RGD:621166
InParanoid:Q99MB5 Genevestigator:Q99MB5
GermOnline:ENSRNOG00000008041 Uniprot:Q99MB5
Length = 145
Score = 167 (63.8 bits), Expect = 1.5e-12, P = 1.5e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQTDY 131
>UNIPROTKB|E1BM60 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0021524
"visceral motor neuron differentiation" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
GO:GO:0031290 GO:GO:0021520 GO:GO:0021524 OMA:RHDSAVQ
EMBL:DAAA02052446 IPI:IPI00701951 UniGene:Bt.34422
Ensembl:ENSBTAT00000022147 NextBio:20928153 Uniprot:E1BM60
Length = 359
Score = 172 (65.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|Q96A47 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0021524 "visceral motor
neuron differentiation" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=TAS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0048666 "neuron development" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:CH471136 GO:GO:0031290
GO:GO:0048935 eggNOG:COG5576 GO:GO:0021520 HOVERGEN:HBG004671
KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR GO:GO:0021524
OMA:RHDSAVQ EMBL:AK001022 EMBL:BC011967 EMBL:BC012136
IPI:IPI00059240 RefSeq:NP_665804.1 UniGene:Hs.444677
ProteinModelPortal:Q96A47 SMR:Q96A47 STRING:Q96A47
PhosphoSite:Q96A47 DMDM:20978495 PRIDE:Q96A47 DNASU:64843
Ensembl:ENST00000290759 GeneID:64843 KEGG:hsa:64843 UCSC:uc002bbw.1
CTD:64843 GeneCards:GC15P076629 HGNC:HGNC:18524 MIM:609481
neXtProt:NX_Q96A47 PharmGKB:PA38566 InParanoid:Q96A47
PhylomeDB:Q96A47 GenomeRNAi:64843 NextBio:66950 Bgee:Q96A47
CleanEx:HS_ISL2 Genevestigator:Q96A47 GermOnline:ENSG00000159556
Uniprot:Q96A47
Length = 359
Score = 172 (65.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAKCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>MGI|MGI:109156 [details] [associations]
symbol:Isl2 "insulin related protein 2 (islet 2)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021524 "visceral motor neuron differentiation"
evidence=IGI;IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IGI;IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 MGI:MGI:109156
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 EMBL:CH466522 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 OMA:RHDSAVQ CTD:64843 EMBL:AK013964
EMBL:AC116699 IPI:IPI00110854 RefSeq:NP_081673.2 UniGene:Mm.273996
PDB:3MMK PDBsum:3MMK ProteinModelPortal:Q9CXV0 STRING:Q9CXV0
PhosphoSite:Q9CXV0 PRIDE:Q9CXV0 DNASU:104360
Ensembl:ENSMUST00000034869 GeneID:104360 KEGG:mmu:104360
UCSC:uc009psm.1 InParanoid:Q9CXV0 NextBio:356992 CleanEx:MM_ISL2
Genevestigator:Q9CXV0 GermOnline:ENSMUSG00000032318 Uniprot:Q9CXV0
Length = 359
Score = 172 (65.6 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|E1BSF2 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AADN02033814 EMBL:AADN02033815 IPI:IPI00685016
Ensembl:ENSGALT00000034098 ArrayExpress:E1BSF2 Uniprot:E1BSF2
Length = 330
Score = 171 (65.3 bits), Expect = 1.6e-12, P = 1.6e-12
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>RGD|621849 [details] [associations]
symbol:Isl2 "ISL LIM homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048663
"neuron fate commitment" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576 GO:GO:0021520
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR
GO:GO:0021524 CTD:64843 EMBL:L35571 IPI:IPI00198543 PIR:A55198
RefSeq:NP_065204.1 UniGene:Rn.10026 PDB:1BW5 PDBsum:1BW5
ProteinModelPortal:P50480 SMR:P50480 STRING:P50480 PRIDE:P50480
GeneID:57233 KEGG:rno:57233 UCSC:RGD:621849 InParanoid:P50480
EvolutionaryTrace:P50480 NextBio:611298 ArrayExpress:P50480
Genevestigator:P50480 GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|P50480 [details] [associations]
symbol:Isl2 "Insulin gene enhancer protein ISL-2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 CTD:64843 EMBL:L35571
IPI:IPI00198543 PIR:A55198 RefSeq:NP_065204.1 UniGene:Rn.10026
PDB:1BW5 PDBsum:1BW5 ProteinModelPortal:P50480 SMR:P50480
STRING:P50480 PRIDE:P50480 GeneID:57233 KEGG:rno:57233
UCSC:RGD:621849 InParanoid:P50480 EvolutionaryTrace:P50480
NextBio:611298 ArrayExpress:P50480 Genevestigator:P50480
GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 172 (65.6 bits), Expect = 1.7e-12, P = 1.7e-12
Identities = 43/130 (33%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
+ C VG SSS L+ + + +H +C RC C L D+
Sbjct: 87 IKCAQCQVGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDEFSL 132
Query: 120 REGKLFCRND 129
RE +L CR D
Sbjct: 133 REHELLCRAD 142
Score = 128 (50.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 79 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
C GC I D+F+L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|F1NBH5 [details] [associations]
symbol:LOC100858792 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GO:GO:0045944 GO:GO:0000122 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:GSFETQV EMBL:AADN02030560
IPI:IPI00812377 Ensembl:ENSGALT00000009595 Uniprot:F1NBH5
Length = 156
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQMDY 142
>UNIPROTKB|E2RLZ2 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:4004 OMA:GSFETQV EMBL:AAEX03012888 RefSeq:XP_851199.1
ProteinModelPortal:E2RLZ2 Ensembl:ENSCAFT00000011097 GeneID:610473
KEGG:cfa:610473 Uniprot:E2RLZ2
Length = 156
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQMDY 142
>UNIPROTKB|E9PK83 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 EMBL:AC091013 HGNC:HGNC:6641 ChiTaRS:LMO1
IPI:IPI00979256 ProteinModelPortal:E9PK83 SMR:E9PK83
Ensembl:ENST00000534484 ArrayExpress:E9PK83 Bgee:E9PK83
Uniprot:E9PK83
Length = 145
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 71 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 119
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 120 LKNNMILCQMDY 131
>UNIPROTKB|E9PSF5 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 CTD:4004
EMBL:AC091013 UniGene:Hs.654426 GeneID:4004 KEGG:hsa:4004
HGNC:HGNC:6641 ChiTaRS:LMO1 IPI:IPI00877062 RefSeq:NP_001257357.1
ProteinModelPortal:E9PSF5 SMR:E9PSF5 Ensembl:ENST00000428101
UCSC:uc001mgh.1 ArrayExpress:E9PSF5 Bgee:E9PSF5 Uniprot:E9PSF5
Length = 155
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 23 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 81 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 129
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 130 LKNNMILCQMDY 141
>UNIPROTKB|P25800 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849 OMA:GSFETQV EMBL:M26682
EMBL:AJ277662 EMBL:AC091013 EMBL:BC069673 EMBL:BC069752
EMBL:BC069793 EMBL:BC096056 EMBL:BC096057 IPI:IPI00396316
PIR:A32795 RefSeq:NP_002306.1 UniGene:Hs.654426
ProteinModelPortal:P25800 SMR:P25800 STRING:P25800
PhosphoSite:P25800 DMDM:132532 PRIDE:P25800 DNASU:4004
Ensembl:ENST00000335790 GeneID:4004 KEGG:hsa:4004 UCSC:uc001mgg.1
GeneCards:GC11M008202 HGNC:HGNC:6641 MIM:186921 neXtProt:NX_P25800
PharmGKB:PA30407 InParanoid:P25800 ChiTaRS:LMO1 GenomeRNAi:4004
NextBio:15708 PMAP-CutDB:P25800 ArrayExpress:P25800 Bgee:P25800
CleanEx:HS_LMO1 Genevestigator:P25800 GermOnline:ENSG00000166407
Uniprot:P25800
Length = 156
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQMDY 142
>UNIPROTKB|Q3B8H4 [details] [associations]
symbol:lmo1 "Rhombotin-1" species:8355 "Xenopus laevis"
[GO:0003674 "molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008150 "biological_process" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q13642 HOVERGEN:HBG054231 CTD:4004
EMBL:BC106431 RefSeq:NP_001089735.1 UniGene:Xl.82232
ProteinModelPortal:Q3B8H4 SMR:Q3B8H4 GeneID:734798 KEGG:xla:734798
Uniprot:Q3B8H4
Length = 156
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQMDY 142
>ZFIN|ZDB-GENE-021115-6 [details] [associations]
symbol:lmo1 "LIM domain only 1" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISS] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-021115-6 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004 eggNOG:NOG288849
OMA:GSFETQV EMBL:AF398514 EMBL:BC092690 IPI:IPI00488481
RefSeq:NP_775326.1 UniGene:Dr.77277 ProteinModelPortal:Q8JFQ2
SMR:Q8JFQ2 STRING:Q8JFQ2 Ensembl:ENSDART00000044208 GeneID:280646
KEGG:dre:280646 InParanoid:Q8JFQ2 NextBio:20804856
ArrayExpress:Q8JFQ2 Bgee:Q8JFQ2 Uniprot:Q8JFQ2
Length = 155
Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 23 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 81 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 129
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 130 LKNNMILCQMDY 141
>UNIPROTKB|F1NV70 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008283 "cell
proliferation" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008585 "female gonad development" evidence=IEA]
[GO:0035262 "gonad morphogenesis" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:AAMLFHG IPI:IPI00682838
EMBL:AADN02033814 EMBL:AADN02033815 Ensembl:ENSGALT00000003480
ArrayExpress:F1NV70 Uniprot:F1NV70
Length = 378
Score = 171 (65.3 bits), Expect = 2.4e-12, P = 2.4e-12
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TL+ D
Sbjct: 112 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDNLVYCRAHF 168
Score = 130 (50.8 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 106
>UNIPROTKB|Q90881 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008045 "motor neuron axon guidance"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=IDA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0021522 eggNOG:NOG240987 KO:K09373 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:L35566 IPI:IPI00682838 PIR:JC5658
RefSeq:NP_990757.1 UniGene:Gga.2348 HSSP:P61969 STRING:Q90881
GeneID:396397 KEGG:gga:396397 CTD:56956 InParanoid:Q90881
NextBio:20816439 Uniprot:Q90881
Length = 397
Score = 171 (65.3 bits), Expect = 2.8e-12, P = 2.8e-12
Identities = 35/131 (26%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARESVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|H0YM35 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007498 "mesoderm development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0007411 GO:GO:0007498 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 Gene3D:2.10.110.10
GO:GO:0001843 GO:GO:0009953 GO:GO:0021978 GO:GO:0000988
EMBL:AC006450 GO:GO:2000678 HGNC:HGNC:6594 ChiTaRS:LHX2
EMBL:AL158052 Ensembl:ENST00000560961 Bgee:H0YM35 Uniprot:H0YM35
Length = 147
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 12 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 71
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 72 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 117
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 118 KDSLVYCRLHF 128
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 4 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 63
Query: 129 DFF 131
D++
Sbjct: 64 DYY 66
>UNIPROTKB|Q801P0 [details] [associations]
symbol:lmo4-b "LIM domain transcription factor LMO4-B"
species:8355 "Xenopus laevis" [GO:0003712 "transcription cofactor
activity" evidence=ISS] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007498 "mesoderm development" evidence=ISS]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0007498 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0045665 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0003712
GO:GO:0007369 HSSP:P61969 HOVERGEN:HBG054231 EMBL:BC048020
RefSeq:NP_001079705.1 UniGene:Xl.15362 ProteinModelPortal:Q801P0
SMR:Q801P0 GeneID:379392 KEGG:xla:379392 CTD:379392
Xenbase:XB-GENE-6256064 Uniprot:Q801P0
Length = 171
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
+CAGC I D+FLL ++R WH C++C C L + C+++ G + CRND+ R
Sbjct: 23 ACAGCGGKIADRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL- 81
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S + C C + I + ++ +H C C C + L D+
Sbjct: 82 --------FGNSGA----CNACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGTIFCEHD 141
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
+CAGC I D+FLL ++R WH C++C C L + C+++ G + CRND+
Sbjct: 23 ACAGCGGKIADRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 78
>ZFIN|ZDB-GENE-081105-149 [details] [associations]
symbol:si:dkey-90l8.3 "si:dkey-90l8.3" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-081105-149 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177 EMBL:CU984584
IPI:IPI00501922 Ensembl:ENSDART00000074551 Uniprot:F1QMD9
Length = 165
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 39/132 (29%), Positives = 60/132 (45%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
SCAGC I D+FLL +ER WH+ C++C C L + C+S+ G + CR D+
Sbjct: 23 SCAGCGGRISDRFLLFSMERYWHSRCLKCSCCQAQLGEIGSTCYSKSGMILCRTDYIS-- 80
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
R G +C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -RLFGHTG---------ACSACGQSIPASEMVMRAQGNVYHLKCFSCATCRNQLVPGDRF 130
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 131 HYVNGTIFCEHD 142
Score = 135 (52.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
SCAGC I D+FLL +ER WH+ C++C C L + C+S+ G + CR D+
Sbjct: 23 SCAGCGGRISDRFLLFSMERYWHSRCLKCSCCQAQLGEIGSTCYSKSGMILCRTDY 78
>ZFIN|ZDB-GENE-030131-3570 [details] [associations]
symbol:lmo4b "LIM domain only 4b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-030131-3570 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:P70662 HOVERGEN:HBG054231 EMBL:AF398515
IPI:IPI00497185 RefSeq:NP_997854.1 UniGene:Dr.78922
ProteinModelPortal:Q8JFQ1 SMR:Q8JFQ1 STRING:Q8JFQ1 GeneID:324849
KEGG:dre:324849 CTD:324849 InParanoid:Q8JFQ1 NextBio:20808994
ArrayExpress:Q8JFQ1 Uniprot:Q8JFQ1
Length = 165
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 38/131 (29%), Positives = 60/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSREGKLFCRNDFFRSPV 61
CAGC I D+FLL ++ WH+ C++C C L + C+++ G + CRND+ R
Sbjct: 23 CAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTFCYTKSGMILCRNDYIRL-- 80
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C+ C + I + ++ +H C C C + L D+
Sbjct: 81 -------FGNSGA----CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFH 129
Query: 119 SREGKLFCRND 129
G LFC +D
Sbjct: 130 YINGSLFCEHD 140
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSREGKLF 125
VG S CAGC I D+FLL ++ WH+ C++C C L + C+++ G +
Sbjct: 13 VGAGSLSWKRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTFCYTKSGMIL 72
Query: 126 CRNDF 130
CRND+
Sbjct: 73 CRNDY 77
>UNIPROTKB|Q0P5B3 [details] [associations]
symbol:LMO1 "Rhombotin-1" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:BC120273 IPI:IPI00699115 RefSeq:NP_001069363.1
ProteinModelPortal:Q0P5B3 SMR:Q0P5B3 STRING:Q0P5B3
Ensembl:ENSBTAT00000045558 GeneID:527152 KEGG:bta:527152 CTD:4004
eggNOG:NOG288849 InParanoid:Q0P5B3 OMA:GSFETQV NextBio:20874528
Uniprot:Q0P5B3
Length = 156
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDQYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQMDY 142
>UNIPROTKB|A9ED79 [details] [associations]
symbol:LMO1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 GO:GO:0045944 GO:GO:0000122
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 HOVERGEN:HBG054231
CTD:4004 OMA:GSFETQV EMBL:FP340194 EMBL:AB304399
RefSeq:NP_001106526.1 SMR:A9ED79 Ensembl:ENSSSCT00000022371
GeneID:100127356 KEGG:ssc:100127356 Uniprot:A9ED79
Length = 156
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQLDY 142
>MGI|MGI:102812 [details] [associations]
symbol:Lmo1 "LIM domain only 1" species:10090 "Mus musculus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:102812
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0000122 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
HOGENOM:HOG000232175 HOVERGEN:HBG054231 OrthoDB:EOG405S2K CTD:4004
eggNOG:NOG288849 OMA:GSFETQV EMBL:AJ296304 EMBL:BC053074
IPI:IPI00410856 RefSeq:NP_476514.1 UniGene:Mm.360145
ProteinModelPortal:Q924W9 SMR:Q924W9 STRING:Q924W9
PhosphoSite:Q924W9 PRIDE:Q924W9 Ensembl:ENSMUST00000036992
GeneID:109594 KEGG:mmu:109594 InParanoid:Q924W9 NextBio:362409
Bgee:Q924W9 CleanEx:MM_LMO1 Genevestigator:Q924W9
GermOnline:ENSMUSG00000036111 Uniprot:Q924W9
Length = 156
Score = 164 (62.8 bits), Expect = 3.1e-12, P = 3.1e-12
Identities = 36/132 (27%), Positives = 62/132 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 24 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 81
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHT--LSDKCF 118
G + + CA C K I + ++ + +H DC C C+ + DK F
Sbjct: 82 -------FGTTGN----CAACSKLIPAFEMVMRARDNVYHLDCFACQLCNQRFCVGDKFF 130
Query: 119 SREGKLFCRNDF 130
+ + C+ D+
Sbjct: 131 LKNNMILCQVDY 142
>UNIPROTKB|E2R2S6 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AAEX03005042 SMR:E2R2S6 Ensembl:ENSCAFT00000018020
Uniprot:E2R2S6
Length = 330
Score = 168 (64.2 bits), Expect = 3.6e-12, P = 3.6e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 5.7e-08, P = 5.7e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|H0YL54 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:AL590115 HGNC:HGNC:14222
ProteinModelPortal:H0YL54 SMR:H0YL54 Ensembl:ENST00000561173
Bgee:H0YL54 Uniprot:H0YL54
Length = 336
Score = 168 (64.2 bits), Expect = 3.8e-12, P = 3.8e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 77 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 136
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 137 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 182
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 183 KDSLVYCRAHF 193
Score = 130 (50.8 bits), Expect = 5.9e-08, P = 5.9e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 77 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 131
>UNIPROTKB|Q58CW3 [details] [associations]
symbol:LHX9 "LIM homeobox 9" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
IPI:IPI00692674 UniGene:Bt.31799 CTD:56956 EMBL:DAAA02043909
EMBL:DAAA02043910 EMBL:BT021834 IPI:IPI00903761
RefSeq:NP_001019715.1 SMR:Q58CW3 Ensembl:ENSBTAT00000017945
GeneID:515012 KEGG:bta:515012 InParanoid:Q58CW3 NextBio:20871620
Uniprot:Q58CW3
Length = 378
Score = 169 (64.5 bits), Expect = 4.0e-12, P = 4.0e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 112 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDSLVYCRAHF 168
Score = 131 (51.2 bits), Expect = 5.8e-08, P = 5.8e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 106
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 168 (64.2 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 41/133 (30%), Positives = 64/133 (48%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+ R
Sbjct: 24 LAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDYVR 83
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
+ C +G SSS L+ + + +H +C RC C L D+
Sbjct: 84 LFGIKCAKCTLGFSSSDLV--------------MRARDSVYHIECFRCSVCSRQLLPGDE 129
Query: 117 CFSREGKLFCRND 129
R+ +L CR D
Sbjct: 130 FSVRDEELLCRAD 142
Score = 131 (51.2 bits), Expect = 5.2e-08, P = 5.2e-08
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 74 SMLISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
S L C GC I D+++L V + WHA C++C +C+ L + C F R+GK +C+ D+
Sbjct: 22 SGLAMCVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|A0JNI8 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 GO:GO:0035262 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:BT026326 EMBL:BC126704 IPI:IPI00692674
IPI:IPI00839239 UniGene:Bt.31799 ProteinModelPortal:A0JNI8
SMR:A0JNI8 Ensembl:ENSBTAT00000043591 Ensembl:ENSBTAT00000054943
InParanoid:Q0V893 OMA:AAMLFHG Uniprot:A0JNI8
Length = 397
Score = 169 (64.5 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 131 (51.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|F1S5F5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 GO:GO:0035262 OMA:AAMLFHG
EMBL:FP325281 Ensembl:ENSSSCT00000011930 Uniprot:F1S5F5
Length = 397
Score = 169 (64.5 bits), Expect = 4.6e-12, P = 4.6e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 131 (51.2 bits), Expect = 6.4e-08, P = 6.4e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|B7Z5P7 [details] [associations]
symbol:LPXN "cDNA FLJ51550, highly similar to Leupaxin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AP001350 EMBL:AP003557 UniGene:Hs.125474
HGNC:HGNC:14061 HOVERGEN:HBG001512 EMBL:AK299264 IPI:IPI00922187
SMR:B7Z5P7 STRING:B7Z5P7 Ensembl:ENST00000528489 UCSC:uc010rkk.2
Uniprot:B7Z5P7
Length = 366
Score = 168 (64.2 bits), Expect = 4.8e-12, P = 4.8e-12
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 191 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 246
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 247 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 293
Query: 123 KLFC 126
+ FC
Sbjct: 294 RPFC 297
Score = 160 (61.4 bits), Expect = 3.7e-11, P = 3.7e-11
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ +
Sbjct: 132 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQ----- 185
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PILDK +L + +TWH + C C + F ++
Sbjct: 186 -------LFSPR---CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDK 234
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 235 KPYCRKDF 242
Score = 115 (45.5 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 250 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 308
Query: 64 PSGCGVGLSSSMLISCAG 81
GCG ++ IS G
Sbjct: 309 CHGCGQPITGRC-ISAMG 325
>UNIPROTKB|P91608 [details] [associations]
symbol:Bx "Dttg protein" species:7242 "Drosophila sp."
[GO:0002121 "inter-male aggressive behavior" evidence=IMP]
[GO:0005634 "nucleus" evidence=NAS] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IGI;IMP] [GO:0035218 "leg disc development"
evidence=IMP] [GO:0036011 "imaginal disc-derived leg segmentation"
evidence=IMP] [GO:0042220 "response to cocaine" evidence=IMP]
[GO:0045475 "locomotor rhythm" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0006911 GO:GO:0046872 GO:GO:0042220
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0002121 GO:GO:0045475
GO:GO:0007476 GO:GO:0036011 HSSP:P70662 EMBL:X83012
ProteinModelPortal:P91608 SMR:P91608 FlyBase:FBgn0000242
InParanoid:P91608 Uniprot:P91608
Length = 266
Score = 163 (62.4 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 39/133 (29%), Positives = 64/133 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC K I D++LL L+ WH DC++C C L + +++ + C+ D+ R
Sbjct: 45 CAGCGKHIQDRYLLRALDMLWHEDCLKCGCCDCRLGEVGSTLYTKGNLMLCKRDYLRL-- 102
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERT--WHADCVRCYDCHHT--LSDKC 117
F + G CA C K ++ F + + RT +H +C C C+H + D+
Sbjct: 103 -FGN---TGY-------CAACSK-VIPAFEMVMRARTNVYHLECFACQQCNHRFCVGDRF 150
Query: 118 FSREGKLFCRNDF 130
+ E K+ C D+
Sbjct: 151 YLCENKILCEYDY 163
>UNIPROTKB|O60711 [details] [associations]
symbol:LPXN "Leupaxin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0033628 "regulation of cell adhesion
mediated by integrin" evidence=IEA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IEA] [GO:0002102 "podosome" evidence=IDA]
[GO:0050859 "negative regulation of B cell receptor signaling
pathway" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005925 "focal adhesion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0003712 "transcription
cofactor activity" evidence=IDA] [GO:0007162 "negative regulation
of cell adhesion" evidence=IDA] [GO:0006461 "protein complex
assembly" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005886 GO:GO:0005634
GO:GO:0005737 GO:GO:0048471 GO:GO:0007165 GO:GO:0006461
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 EMBL:CH471076
GO:GO:0007155 GO:GO:0006351 GO:GO:0005925 Gene3D:2.10.110.10
GO:GO:0042995 GO:GO:0007162 GO:GO:0002102 GO:GO:0003712
GO:GO:0033628 EMBL:AF062075 EMBL:AK300955 EMBL:AK313306
EMBL:CR536531 EMBL:AK223165 EMBL:AP001350 EMBL:AP003557
EMBL:BC019035 IPI:IPI00299066 IPI:IPI00871430 RefSeq:NP_001137467.1
RefSeq:NP_004802.1 UniGene:Hs.125474 PDB:1X3H PDBsum:1X3H
ProteinModelPortal:O60711 SMR:O60711 IntAct:O60711
MINT:MINT-1449182 STRING:O60711 PhosphoSite:O60711 PaxDb:O60711
PeptideAtlas:O60711 PRIDE:O60711 DNASU:9404 Ensembl:ENST00000395074
Ensembl:ENST00000528954 GeneID:9404 KEGG:hsa:9404 UCSC:uc001nmw.3
CTD:9404 GeneCards:GC11M058294 HGNC:HGNC:14061 MIM:605390
neXtProt:NX_O60711 PharmGKB:PA30441 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 InParanoid:O60711
OMA:GFHEKDK OrthoDB:EOG4TMR25 PhylomeDB:O60711
EvolutionaryTrace:O60711 GenomeRNAi:9404 NextBio:35232
ArrayExpress:O60711 Bgee:O60711 CleanEx:HS_LPXN
Genevestigator:O60711 GermOnline:ENSG00000110031 GO:GO:0050859
InterPro:IPR017305 PIRSF:PIRSF037881 Uniprot:O60711
Length = 386
Score = 168 (64.2 bits), Expect = 5.5e-12, P = 5.5e-12
Identities = 39/124 (31%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDG 313
Query: 123 KLFC 126
+ FC
Sbjct: 314 RPFC 317
Score = 160 (61.4 bits), Expect = 4.1e-11, P = 4.1e-11
Identities = 41/128 (32%), Positives = 60/128 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L ++WH + C C + S F R G +C ND+ +
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEEIGSSPFFERSGLAYCPNDYHQ----- 205
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PILDK +L + +TWH + C C + F ++
Sbjct: 206 -------LFSPR---CAYCAAPILDK-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDK 254
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 255 KPYCRKDF 262
Score = 115 (45.5 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/78 (29%), Positives = 37/78 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ FC +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFTSFSTGSFFELDGRPFCELHYHHRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAG 81
GCG ++ IS G
Sbjct: 329 CHGCGQPITGRC-ISAMG 345
>RGD|727956 [details] [associations]
symbol:Lhx9 "LIM homeobox 9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0008585 "female gonad development"
evidence=IEA;ISO] [GO:0035262 "gonad morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AY273890
RGD:727956 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0008585
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584
Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG HSSP:P61969
CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 168 (64.2 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 122 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 167
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 168 KDSLVYCRAHF 178
Score = 130 (50.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 116
>UNIPROTKB|Q80W90 [details] [associations]
symbol:Lhx9 "LIM/homeobox protein Lhx9" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 EMBL:AY273890 RGD:727956 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
HSSP:P61969 CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 168 (64.2 bits), Expect = 5.6e-12, P = 5.6e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 122 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 167
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 168 KDSLVYCRAHF 178
Score = 130 (50.8 bits), Expect = 7.8e-08, P = 7.8e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 116
>ZFIN|ZDB-GENE-091118-109 [details] [associations]
symbol:lhx2a "LIM homeobox 2a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-091118-109 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BX470252 IPI:IPI00994306 Ensembl:ENSDART00000134360
ArrayExpress:E9QBI8 Bgee:E9QBI8 Uniprot:E9QBI8
Length = 328
Score = 166 (63.5 bits), Expect = 5.8e-12, P = 5.8e-12
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D+F L ER WH C++C C L + CFS+ G ++C+ D++ R
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYYSR--R 70
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFS 119
F S CA C I + ++ + +H C C CH L D
Sbjct: 71 FSSQ-----------RCARCHLGISATEIVMRARDLVYHLSCFSCATCHKVLLTGDHYGM 119
Query: 120 REGKLFCR 127
+E ++CR
Sbjct: 120 KETSVYCR 127
Score = 133 (51.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D+F L ER WH C++C C L + CFS+ G ++C+ D++
Sbjct: 13 CAGCGALISDRFYLLAAERRWHERCLKCSACQTDLESELTCFSKHGDIYCKEDYY 67
>ZFIN|ZDB-GENE-980526-562 [details] [associations]
symbol:isl2a "islet2a" species:7955 "Danio rerio"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IGI;IMP] [GO:0048665 "neuron fate specification"
evidence=IGI;IMP] [GO:0048675 "axon extension" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-562 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0048665 GeneTree:ENSGT00700000104050
GO:GO:0048676 eggNOG:COG5576 HOVERGEN:HBG004671 KO:K09370
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38453 EMBL:X88805
EMBL:U09403 IPI:IPI00483445 PIR:I51734 RefSeq:NP_571045.1
UniGene:Dr.281 ProteinModelPortal:P53406 SMR:P53406
Ensembl:ENSDART00000012862 GeneID:30157 KEGG:dre:30157 CTD:30157
InParanoid:P53406 OMA:RHDSAVQ NextBio:20806628 ArrayExpress:P53406
Bgee:P53406 Uniprot:P53406
Length = 359
Score = 167 (63.8 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 41/130 (31%), Positives = 62/130 (47%)
Query: 5 CAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPV 61
C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDC-HHTLSDKCFS- 119
+ C +G SS L+ + + +H +C RC C H L FS
Sbjct: 87 IKCAKCNIGFCSSDLV--------------MRARDNVYHMECFRCSVCSRHLLPGDEFSL 132
Query: 120 REGKLFCRND 129
R+ +L CR D
Sbjct: 133 RDEELLCRAD 142
Score = 126 (49.4 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 74 SMLISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDF 130
S + C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+
Sbjct: 22 SGIAMCVGCGSQIHDQYILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDY 81
>UNIPROTKB|E2R2S5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0008585 GO:GO:0046872
GO:GO:0008283 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262 OMA:AAMLFHG
CTD:56956 EMBL:AAEX03005042 RefSeq:XP_848787.1 SMR:E2R2S5
Ensembl:ENSCAFT00000018021 GeneID:490257 KEGG:cfa:490257
NextBio:20863313 Uniprot:E2R2S5
Length = 397
Score = 168 (64.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|Q9NQ69 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 EMBL:CH471067 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 KO:K09373 GO:GO:0035262 HOVERGEN:HBG006262
OrthoDB:EOG4G4GQK OMA:AAMLFHG CTD:56956 EMBL:AJ277915 EMBL:AJ277916
EMBL:AJ277917 EMBL:AJ277918 EMBL:AJ277919 EMBL:AJ277920
EMBL:AJ296272 EMBL:AY273889 EMBL:AL590115 EMBL:BC131622
IPI:IPI00328729 IPI:IPI00396103 IPI:IPI00642345 IPI:IPI00642361
RefSeq:NP_001014434.1 RefSeq:NP_064589.2 UniGene:Hs.442578
UniGene:Hs.706475 PDB:2DMQ PDBsum:2DMQ ProteinModelPortal:Q9NQ69
SMR:Q9NQ69 STRING:Q9NQ69 PhosphoSite:Q9NQ69 DMDM:224471883
PRIDE:Q9NQ69 Ensembl:ENST00000337020 Ensembl:ENST00000367387
Ensembl:ENST00000367390 Ensembl:ENST00000367391 GeneID:56956
KEGG:hsa:56956 UCSC:uc001gui.1 UCSC:uc001guk.1
GeneCards:GC01P197881 HGNC:HGNC:14222 HPA:HPA009695 MIM:606066
neXtProt:NX_Q9NQ69 PharmGKB:PA30368 PhylomeDB:Q9NQ69
EvolutionaryTrace:Q9NQ69 GenomeRNAi:56956 NextBio:62575
ArrayExpress:Q9NQ69 Bgee:Q9NQ69 CleanEx:HS_LHX9
Genevestigator:Q9NQ69 GermOnline:ENSG00000143355 Uniprot:Q9NQ69
Length = 397
Score = 168 (64.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>MGI|MGI:1316721 [details] [associations]
symbol:Lhx9 "LIM homeobox protein 9" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008584 "male gonad development" evidence=IMP]
[GO:0008585 "female gonad development" evidence=IMP] [GO:0035262
"gonad morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1316721 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
CTD:56956 EMBL:AJ243851 EMBL:AJ243852 EMBL:AJ243853 EMBL:AJ243854
EMBL:AJ243855 EMBL:AJ243856 EMBL:AJ243857 EMBL:AC154398
EMBL:BC072623 EMBL:AF134761 EMBL:AF113518 IPI:IPI00124662
IPI:IPI00227842 IPI:IPI00626920 IPI:IPI00830796
RefSeq:NP_001020736.1 RefSeq:NP_001036042.1 RefSeq:NP_034844.1
UniGene:Mm.250732 ProteinModelPortal:Q9WUH2 SMR:Q9WUH2
IntAct:Q9WUH2 MINT:MINT-1340747 STRING:Q9WUH2 PRIDE:Q9WUH2
Ensembl:ENSMUST00000019374 Ensembl:ENSMUST00000046870
Ensembl:ENSMUST00000093486 Ensembl:ENSMUST00000112026
Ensembl:ENSMUST00000112030 GeneID:16876 KEGG:mmu:16876
UCSC:uc007cvr.1 UCSC:uc007cvs.1 UCSC:uc007cvu.1 ChiTaRS:LHX9
NextBio:290864 Bgee:Q9WUH2 CleanEx:MM_LHX9 Genevestigator:Q9WUH2
GermOnline:ENSMUSG00000019230 Uniprot:Q9WUH2
Length = 397
Score = 168 (64.2 bits), Expect = 5.9e-12, P = 5.9e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCSTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDSLVYCRAHF 187
Score = 130 (50.8 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>UNIPROTKB|Q8AW92 [details] [associations]
symbol:lmo4-a "LIM domain transcription factor LMO4-A"
species:8355 "Xenopus laevis" [GO:0003712 "transcription cofactor
activity" evidence=IMP] [GO:0005575 "cellular_component"
evidence=ND] [GO:0007498 "mesoderm development" evidence=IMP]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0007498 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0045665 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0003712
GO:GO:0007369 HSSP:P61969 HOVERGEN:HBG054231 EMBL:AJ511277
EMBL:BC108585 RefSeq:NP_001079179.1 UniGene:Xl.5131
ProteinModelPortal:Q8AW92 SMR:Q8AW92 GeneID:373776 KEGG:xla:373776
CTD:373776 Xenbase:XB-GENE-865262 Uniprot:Q8AW92
Length = 171
Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 38/132 (28%), Positives = 60/132 (45%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSP 60
+CAGC I D+FLL ++R WH C++C C L + C+++ G + CRND+ R
Sbjct: 23 ACAGCGGKIGDRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL- 81
Query: 61 VRFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKC 117
G S + C C + I + ++ +H C C C + L D+
Sbjct: 82 --------FGNSGA----CNACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRF 129
Query: 118 FSREGKLFCRND 129
G +FC +D
Sbjct: 130 HYVNGTIFCEHD 141
Score = 132 (51.5 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 22/56 (39%), Positives = 34/56 (60%)
Query: 78 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
+CAGC I D+FLL ++R WH C++C C L + C+++ G + CRND+
Sbjct: 23 ACAGCGGKIGDRFLLYSMDRYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDY 78
>FB|FBgn0041789 [details] [associations]
symbol:Pax "Paxillin" species:7227 "Drosophila melanogaster"
[GO:0007016 "cytoskeletal anchoring at plasma membrane"
evidence=ISS] [GO:0005925 "focal adhesion" evidence=ISS;NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0035218 "leg disc
development" evidence=IMP] [GO:0032319 "regulation of Rho GTPase
activity" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IMP] [GO:0010506 "regulation of autophagy" evidence=IGI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 GO:GO:0035220 GO:GO:0010506 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007016 GO:GO:0032319
GO:GO:0035218 eggNOG:NOG267887 KO:K05760 RefSeq:NP_001033913.1
RefSeq:NP_724184.2 UniGene:Dm.6483 SMR:Q2PDT4 STRING:Q2PDT4
EnsemblMetazoa:FBtr0081211 EnsemblMetazoa:FBtr0100449 GeneID:35215
KEGG:dme:Dmel_CG31794 UCSC:CG31794-RF CTD:35215 FlyBase:FBgn0041789
InParanoid:Q2PDT4 OrthoDB:EOG4DBRVZ GenomeRNAi:35215 NextBio:792414
Uniprot:Q2PDT4
Length = 581
Score = 170 (64.9 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 42/129 (32%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C CEKPI+ + ++ L +TWH + C C L + F R+G +C D+
Sbjct: 348 CNACEKPIVGQ-VITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDYHN----- 401
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C ILDK + L++TWH + C C ++ F R+G
Sbjct: 402 -------LFSPR---CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDG 450
Query: 123 KLFCRNDFF 131
K +CRND+F
Sbjct: 451 KPYCRNDYF 459
Score = 169 (64.5 bits), Expect = 9.6e-12, P = 9.6e-12
Identities = 39/128 (30%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C ILDK + L++TWH + C C ++ F R+GK +CRND+F F
Sbjct: 407 CAYCNGAILDK-CVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYFEM---F 462
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
C GC + I++ ++ + L WH DC C DC F EG
Sbjct: 463 APKCN------------GCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEG 509
Query: 123 KLFCRNDF 130
+C +
Sbjct: 510 LPYCETHY 517
Score = 116 (45.9 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 32/128 (25%), Positives = 51/128 (39%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC + I++ ++ + L WH DC C DC F EG +C +
Sbjct: 466 CNGCNRAIMENYI-SALNSQWHPDCFVCRDCRQPFQGGSFFDHEGLPYCETHYHAK---- 520
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
S+ CAGC KPI + + + ++ +H + C C L+ F +
Sbjct: 521 --------RGSL---CAGCSKPITGRCITAMFKK-FHPEHFVCAFCLKQLNKGTFKEQKD 568
Query: 123 KLFCRNDF 130
K +C F
Sbjct: 569 KPYCHTCF 576
>ZFIN|ZDB-GENE-050417-210 [details] [associations]
symbol:lhx9 "LIM homeobox 9" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-050417-210 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG CTD:56956
EMBL:AB188254 EMBL:BX004971 EMBL:BX511183 EMBL:BC163023
EMBL:BC163060 EMBL:BC163073 IPI:IPI00635283 RefSeq:NP_001032320.1
UniGene:Dr.42632 ProteinModelPortal:Q1LWV4 SMR:Q1LWV4 STRING:Q1LWV4
Ensembl:ENSDART00000054807 GeneID:550405 KEGG:dre:550405
InParanoid:Q1LWV4 NextBio:20879654 Bgee:Q1LWV4 Uniprot:Q1LWV4
Length = 396
Score = 167 (63.8 bits), Expect = 7.5e-12, P = 7.5e-12
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H C C C+ TL+ D
Sbjct: 131 QRCARCHLGISASEMV--------------MRARDSVYHLSCFTCTTCNKTLTTGDHFGM 176
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 177 KDNLVYCRVHF 187
Score = 130 (50.8 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 125
>FB|FBgn0032196 [details] [associations]
symbol:CG5708 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HSSP:P25801 GeneTree:ENSGT00700000104177 eggNOG:NOG314117
EMBL:BT012487 RefSeq:NP_609359.1 RefSeq:NP_723534.1
UniGene:Dm.18161 SMR:Q9VL21 IntAct:Q9VL21 MINT:MINT-885753
STRING:Q9VL21 EnsemblMetazoa:FBtr0079955 EnsemblMetazoa:FBtr0079956
GeneID:34361 KEGG:dme:Dmel_CG5708 UCSC:CG5708-RA
FlyBase:FBgn0032196 InParanoid:Q9VL21 OMA:FMDESSN OrthoDB:EOG4VQ858
GenomeRNAi:34361 NextBio:788118 Uniprot:Q9VL21
Length = 241
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 39/135 (28%), Positives = 60/135 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR--S 59
C GC I D++LL L+R WH C++C+ C L++ CF+R G + C+ D+
Sbjct: 78 CGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKKDYSSMFG 137
Query: 60 PVRFPSGCGVGLSSSMLISCA--GCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SD 115
SGCG + S L++ A G L ++ +H C C C +L D
Sbjct: 138 CSGVCSGCGETIPPSELVAKALTGINNIDLQNQQKQIINCVFHLRCFSCAKCGSSLRPGD 197
Query: 116 KCFSREGKLFCRNDF 130
+ L C D+
Sbjct: 198 RYTMLGASLVCEQDW 212
Score = 137 (53.3 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 23/62 (37%), Positives = 38/62 (61%)
Query: 72 SSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRN 128
S+S++ C GC I D++LL L+R WH C++C+ C L++ CF+R G + C+
Sbjct: 71 SNSLIKVCGGCGDKISDRYLLYALDRYWHNGCLKCHCCGAMLAEVGSSCFTRRGLILCKK 130
Query: 129 DF 130
D+
Sbjct: 131 DY 132
>ZFIN|ZDB-GENE-040426-1099 [details] [associations]
symbol:zgc:56628 "zgc:56628" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-040426-1099
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 HSSP:P70662 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 EMBL:BX927330 EMBL:BC049054
IPI:IPI00512792 RefSeq:NP_956566.1 UniGene:Dr.18443 SMR:Q7ZUG7
Ensembl:ENSDART00000022112 GeneID:393242 KEGG:dre:393242
OMA:TELRTCV NextBio:20814305 Uniprot:Q7ZUG7
Length = 172
Score = 160 (61.4 bits), Expect = 8.2e-12, P = 8.2e-12
Identities = 38/131 (29%), Positives = 59/131 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
C GC I D+FLL L+ WH C++C C L++ CF++ G + C++D+ R
Sbjct: 34 CVGCGCKISDRFLLFALDGYWHCHCLKCSCCQAQLAEIGSSCFTKRGLILCKSDYLRL-- 91
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTL--SDKCF 118
G S + C C I ++ ++ +H C C CH+ L D+
Sbjct: 92 -------FGHSGA----CRACGTSIPANEMVMRAQGNVFHVKCFVCSICHNQLVPGDRFH 140
Query: 119 SREGKLFCRND 129
GKL+C D
Sbjct: 141 YANGKLYCERD 151
Score = 120 (47.3 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
C GC I D+FLL L+ WH C++C C L++ CF++ G + C++D+
Sbjct: 34 CVGCGCKISDRFLLFALDGYWHCHCLKCSCCQAQLAEIGSSCFTKRGLILCKSDY 88
>UNIPROTKB|E1C5J6 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002102
"podosome" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0007162 "negative regulation of cell adhesion" evidence=IEA]
[GO:0033628 "regulation of cell adhesion mediated by integrin"
evidence=IEA] [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 EMBL:AADN02050741 EMBL:AADN02050742 IPI:IPI00588336
Ensembl:ENSGALT00000032676 Uniprot:E1C5J6
Length = 308
Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI ++ +L+ +++TWH + C C D F R GK +C DF V F
Sbjct: 134 CAYCAGPIRER-VLSAMDQTWHPEHFFCAHCGKVFGDDGFHERGGKPYCFQDFV---VLF 189
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
C GCE+P+ D +L + L+ WH +C C DC + ++ F EG
Sbjct: 190 AP------------KCQGCERPLTDNYL-SALQGVWHPECFVCADCLSSFTNGSFFELEG 236
Query: 123 KLFCRNDF 130
+ +C F
Sbjct: 237 RPYCELHF 244
Score = 151 (58.2 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/128 (31%), Positives = 57/128 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
CA C KPI K + L TWH + C C L + F R G+ +C D+ ++ F
Sbjct: 75 CAACHKPIAGK-MFTALGETWHPEHFTCARCGQELGGQPFFERGGQAYCEEDYHQA---F 130
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C CAG PI ++ +L+ +++TWH + C C D F R G
Sbjct: 131 SPRCAY---------CAG---PIRER-VLSAMDQTWHPEHFFCAHCGKVFGDDGFHERGG 177
Query: 123 KLFCRNDF 130
K +C DF
Sbjct: 178 KPYCFQDF 185
Score = 128 (50.1 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 31/115 (26%), Positives = 53/115 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GCE+P+ D +L + L+ WH +C C DC + ++ F EG+ +C F +
Sbjct: 193 CQGCERPLTDNYL-SALQGVWHPECFVCADCLSSFTNGSFFELEGRPYCELHFHQRQGSV 251
Query: 64 PSGCGVGLSSSMLISCAGCEKP--ILDKFLLNVLER-TWH--ADCVRCYDCHHTL 113
GCG ++ + + P + + L+ L + T+ D + C CH L
Sbjct: 252 CHGCGHPITGRCITAAGRKYHPEHFICAYCLSQLHKGTFRERGDKMYCQACHDKL 306
Score = 102 (41.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 20/63 (31%), Positives = 31/63 (49%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCR 127
+G++++ CA C KPI K + L TWH + C C L + F R G+ +C
Sbjct: 65 LGITAAPAAVCAACHKPIAGK-MFTALGETWHPEHFTCARCGQELGGQPFFERGGQAYCE 123
Query: 128 NDF 130
D+
Sbjct: 124 EDY 126
>UNIPROTKB|O43294 [details] [associations]
symbol:TGFB1I1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:9606 "Homo sapiens" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0009408 "response to heat" evidence=IEA] [GO:0016331
"morphogenesis of embryonic epithelium" evidence=IEA] [GO:0030855
"epithelial cell differentiation" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IEA] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0016363 "nuclear matrix" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=NAS;IPI] [GO:0003713 "transcription
coactivator activity" evidence=NAS;IDA] [GO:0005622 "intracellular"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS;IDA] [GO:0030521 "androgen receptor
signaling pathway" evidence=NAS] [GO:0048495 "Roundabout binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007155 "cell adhesion" evidence=TAS] [GO:0008285
"negative regulation of cell proliferation" evidence=TAS]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IDA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IDA] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IDA] [GO:0010718 "positive
regulation of epithelial to mesenchymal transition" evidence=IDA]
[GO:0031012 "extracellular matrix" evidence=IDA] [GO:0070411
"I-SMAD binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0045893 GO:GO:0008285 GO:GO:0030521 GO:GO:0016055
GO:GO:0005856 EMBL:CH471192 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 GO:GO:0005622 Gene3D:2.10.110.10
GO:GO:0003713 GO:GO:0006366 GO:GO:0010718 GO:GO:0030511
GO:GO:0045599 GO:GO:0016363 Pathway_Interaction_DB:ar_pathway
GO:GO:0016331 GO:GO:0050681 GO:GO:0045165 GO:GO:0030512
GO:GO:0030855 GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 InterPro:IPR017305
PIRSF:PIRSF037881 CTD:7041 OMA:TAGEQKE OrthoDB:EOG48GW35
EMBL:AF116343 EMBL:DQ309025 EMBL:AK313327 EMBL:BC001507
EMBL:BC001830 EMBL:BC017288 EMBL:BC032545 EMBL:AB007836
IPI:IPI00396399 IPI:IPI00761017 RefSeq:NP_001035919.1
RefSeq:NP_001158191.1 RefSeq:NP_057011.2 UniGene:Hs.513530
ProteinModelPortal:O43294 SMR:O43294 DIP:DIP-5931N IntAct:O43294
MINT:MINT-243624 STRING:O43294 PhosphoSite:O43294 PaxDb:O43294
PRIDE:O43294 DNASU:7041 Ensembl:ENST00000361773
Ensembl:ENST00000394858 Ensembl:ENST00000394863
Ensembl:ENST00000567607 GeneID:7041 KEGG:hsa:7041 UCSC:uc002ecd.2
GeneCards:GC16P031483 HGNC:HGNC:11767 HPA:CAB020844 HPA:HPA006376
MIM:602353 neXtProt:NX_O43294 PharmGKB:PA36481 InParanoid:O43294
GenomeRNAi:7041 NextBio:27511 Bgee:O43294 CleanEx:HS_TGFB1I1
Genevestigator:O43294 Uniprot:O43294
Length = 461
Score = 167 (63.8 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 41/128 (32%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF + +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ--LFA 343
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 344 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 146 (56.5 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 39/128 (30%), Positives = 53/128 (41%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C L F ++G FC +F RF
Sbjct: 228 CGSCNKPIAGQ-VVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFE---RF 283
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C +PI K ++ L WH + C C D+ F REG
Sbjct: 284 SPRCGF------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREG 330
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 331 RPYCRRDF 338
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAR---- 400
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 401 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 449 KPYCQPCF 456
>UNIPROTKB|H7C0H1 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
EMBL:AC006450 HGNC:HGNC:6594 ChiTaRS:LHX2 OMA:CNENDAE EMBL:AL158052
ProteinModelPortal:H7C0H1 Ensembl:ENST00000446480 Uniprot:H7C0H1
Length = 412
Score = 166 (63.5 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/131 (27%), Positives = 65/131 (49%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++
Sbjct: 51 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYS---- 106
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
PS G S+ CA C I + ++ + +H +C C C+ L+ D
Sbjct: 107 -PSLHGPYRRFSVQ-RCARCHLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGM 164
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 165 KDSLVYCRLHF 175
Score = 138 (53.6 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 43 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 102
Query: 129 DFF 131
D++
Sbjct: 103 DYY 105
>UNIPROTKB|A2PZF9 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:8410
"Glandirana rugosa" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:AB269882
EMBL:AB269883 EMBL:AB269884 EMBL:AB269885 EMBL:AB269886
ProteinModelPortal:A2PZF9 SMR:A2PZF9 Uniprot:A2PZF9
Length = 379
Score = 165 (63.1 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/131 (27%), Positives = 66/131 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + E +H C C C+ TLS D
Sbjct: 113 QRCARCHLGISASEIV--------------MRARESVYHLSCFTCTTCNKTLSTGDHFGM 158
Query: 120 REGKLFCRNDF 130
+E ++ R F
Sbjct: 159 KENLVYRRAHF 169
Score = 130 (50.8 bits), Expect = 7.5e-08, P = 7.5e-08
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
CAGC I D++ L +++ WH C++C +C L + CF+++G ++C+ D++
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYY 107
>UNIPROTKB|Q3MHZ4 [details] [associations]
symbol:TGFB1I1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:9913 "Bos taurus" [GO:0016363
"nuclear matrix" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0070411
"I-SMAD binding" evidence=IEA] [GO:0050681 "androgen receptor
binding" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA] [GO:0045165 "cell fate
commitment" evidence=IEA] [GO:0031012 "extracellular matrix"
evidence=IEA] [GO:0030855 "epithelial cell differentiation"
evidence=IEA] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=IEA] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0030511 "positive regulation of transforming
growth factor beta receptor signaling pathway" evidence=IEA]
[GO:0016331 "morphogenesis of embryonic epithelium" evidence=IEA]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005737 GO:GO:0045893 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0003713 GO:GO:0010718
GO:GO:0030511 GO:GO:0045599 GO:GO:0031012 GO:GO:0016363
GO:GO:0016331 GO:GO:0045165 GO:GO:0030512 GO:GO:0030855
GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881
EMBL:DV813479 EMBL:BC104510 IPI:IPI00686932 RefSeq:NP_001030390.1
UniGene:Bt.51950 ProteinModelPortal:Q3MHZ4 SMR:Q3MHZ4 STRING:Q3MHZ4
PRIDE:Q3MHZ4 Ensembl:ENSBTAT00000003094 GeneID:515834
KEGG:bta:515834 CTD:7041 InParanoid:Q3MHZ4 OMA:TAGEQKE
OrthoDB:EOG48GW35 NextBio:20872019 Uniprot:Q3MHZ4
Length = 456
Score = 166 (63.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/128 (32%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF + +
Sbjct: 282 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ--LFA 338
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 339 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEG 384
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 385 RPLCENHF 392
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C L F ++G FC +F RF
Sbjct: 223 CGSCNKPIAGQ-VVTALGRAWHPEHFVCGGCSTALGGSSFFEKDGAPFCPECYFE---RF 278
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG+ C +PI K ++ L WH + C C D+ F REG
Sbjct: 279 SPRCGL------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREG 325
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 326 RPYCRRDF 333
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 341 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAR---- 395
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 396 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 443
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 444 KPYCQPCF 451
>UNIPROTKB|E2RTE0 [details] [associations]
symbol:TGFB1I1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070411 "I-SMAD binding" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0048495
"Roundabout binding" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045599
"negative regulation of fat cell differentiation" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0031012
"extracellular matrix" evidence=IEA] [GO:0030855 "epithelial cell
differentiation" evidence=IEA] [GO:0030579 "ubiquitin-dependent
SMAD protein catabolic process" evidence=IEA] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA] [GO:0030511 "positive regulation of
transforming growth factor beta receptor signaling pathway"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA] [GO:0010718 "positive regulation of epithelial to
mesenchymal transition" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0045893
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0005622
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0003713
GO:GO:0010718 GO:GO:0030511 GO:GO:0045599 GO:GO:0031012
GO:GO:0016331 GO:GO:0045165 GO:GO:0030512 GO:GO:0030855
GO:GO:0030579 InterPro:IPR017305 PIRSF:PIRSF037881 OMA:TAGEQKE
EMBL:AAEX03004374 Ensembl:ENSCAFT00000026755 Uniprot:E2RTE0
Length = 461
Score = 166 (63.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 41/128 (32%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C D+ F REG+ +CR DF + +
Sbjct: 287 CGLCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREGRPYCRRDFLQ--LFA 343
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 344 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C L F ++G FC +F RF
Sbjct: 228 CGSCSKPIAGQ-VVTALGRAWHPEHFICGGCSMALGGSSFFEKDGAPFCPECYFE---RF 283
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG+ C +PI K ++ L WH + C C D+ F REG
Sbjct: 284 SPRCGL------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGDEGFHEREG 330
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 331 RPYCRRDF 338
Score = 138 (53.6 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECFAPFSGGSFFEHEGRPLCENHFHAR---- 400
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R G
Sbjct: 401 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAG 448
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 449 KPYCQPCF 456
>UNIPROTKB|E2QUL4 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050859 "negative regulation of B cell
receptor signaling pathway" evidence=IEA] [GO:0033628 "regulation
of cell adhesion mediated by integrin" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0002102 "podosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007162 GO:GO:0002102
GO:GO:0003712 GO:GO:0033628 CTD:9404 OMA:GFHEKDK GO:GO:0050859
InterPro:IPR017305 PIRSF:PIRSF037881 EMBL:AAEX03011425
RefSeq:XP_540583.2 Ensembl:ENSCAFT00000012313 GeneID:483465
KEGG:cfa:483465 NextBio:20857851 Uniprot:E2QUL4
Length = 386
Score = 164 (62.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILD+ +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPILDR-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + ++ WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMDTVWHPECFVCGDCFSSFSSGSFFELDG 313
Query: 123 KLFC 126
+ +C
Sbjct: 314 RPYC 317
Score = 150 (57.9 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 39/128 (30%), Positives = 57/128 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L + WH + C C + S F R G +C D+
Sbjct: 152 CASCQKPIAGK-VIHALGQAWHPEHFVCTHCKEEIGSSPFFERSGLAYCSKDYHH----- 205
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PILD+ +L + +TWH + C C + F ++
Sbjct: 206 -------LFSPR---CAYCAAPILDR-VLTAMNQTWHPEHFFCSHCGEVFGAEGFHEKDK 254
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 255 KPYCRKDF 262
Score = 117 (46.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 31/128 (24%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + ++ WH +C C DC + S F +G+ +C + +
Sbjct: 270 CGGCNRPVLENYL-SAMDTVWHPECFVCGDCFSSFSSGSFFELDGRPYCE-------LHY 321
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
G C GC +PI + ++ + +H + C C LS F ++
Sbjct: 322 HQRRGT--------LCHGCGQPITGR-CISAMGHKFHPEHFVCAFCLTQLSKGIFREQDD 372
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 373 KTYCQPCF 380
>MGI|MGI:2147677 [details] [associations]
symbol:Lpxn "leupaxin" species:10090 "Mus musculus"
[GO:0002102 "podosome" evidence=ISO;IDA] [GO:0003712 "transcription
cofactor activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0033628
"regulation of cell adhesion mediated by integrin" evidence=IMP]
[GO:0042995 "cell projection" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0050859 "negative regulation of B cell
receptor signaling pathway" evidence=ISO;IDA] [GO:2001141
"regulation of RNA biosynthetic process" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:2147677 GO:GO:0005886 GO:GO:0005634 GO:GO:0048471
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0007155
GO:GO:0006351 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0042995 GO:GO:0007162
GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 CTD:9404 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OMA:GFHEKDK
OrthoDB:EOG4TMR25 GO:GO:0050859 InterPro:IPR017305
PIRSF:PIRSF037881 EMBL:AB053936 EMBL:AB071194 IPI:IPI00387515
RefSeq:NP_598913.1 UniGene:Mm.313136 ProteinModelPortal:Q99N69
SMR:Q99N69 IntAct:Q99N69 STRING:Q99N69 PhosphoSite:Q99N69
PaxDb:Q99N69 PRIDE:Q99N69 Ensembl:ENSMUST00000025601 GeneID:107321
KEGG:mmu:107321 UCSC:uc008guq.1 InParanoid:Q99N69 NextBio:358680
Bgee:Q99N69 CleanEx:MM_LPXN Genevestigator:Q99N69
GermOnline:ENSMUSG00000024696 Uniprot:Q99N69
Length = 386
Score = 164 (62.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI DK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPITDK-VLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + + WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMNTVWHPECFVCGDCFSSFSSGSFFELDG 313
Query: 123 KLFC 126
+ FC
Sbjct: 314 RPFC 317
Score = 157 (60.3 bits), Expect = 8.8e-11, P = 8.8e-11
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L ++WH + C C L S F R G +C D+ R
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEELGSSPFFERSGLAYCSKDYHR----- 205
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PI DK +L + +TWH + C C + F ++
Sbjct: 206 -------LFSPR---CAYCAAPITDK-VLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDK 254
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 255 KPYCRKDF 262
>RGD|1304981 [details] [associations]
symbol:Lpxn "leupaxin" species:10116 "Rattus norvegicus"
[GO:0002102 "podosome" evidence=IEA;ISO] [GO:0003674
"molecular_function" evidence=ND] [GO:0003712 "transcription
cofactor activity" evidence=IEA;ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0005925 "focal
adhesion" evidence=IEA;ISO] [GO:0007162 "negative regulation of
cell adhesion" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0033628 "regulation of cell adhesion mediated by integrin"
evidence=IEA;ISO] [GO:0050859 "negative regulation of B cell
receptor signaling pathway" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1304981 GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007162 GO:GO:0002102
GO:GO:0003712 GO:GO:0033628 CTD:9404 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OrthoDB:EOG4TMR25
GO:GO:0050859 InterPro:IPR017305 PIRSF:PIRSF037881 EMBL:BC088217
IPI:IPI00371432 RefSeq:NP_001009649.1 UniGene:Rn.29200 SMR:Q5M852
Ensembl:ENSRNOT00000017109 GeneID:293783 KEGG:rno:293783
UCSC:RGD:1304981 InParanoid:Q5M852 NextBio:636996
Genevestigator:Q5M852 Uniprot:Q5M852
Length = 386
Score = 164 (62.8 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 38/124 (30%), Positives = 56/124 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PI DK +L + +TWH + C C + F ++ K +CR DF F
Sbjct: 211 CAYCAAPITDK-VLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDKKPYCRKDFL---AMF 266
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
CG GC +P+L+ +L + + WH +C C DC + S F +G
Sbjct: 267 SPKCG------------GCNRPVLENYL-SAMNTVWHPECFVCGDCFSSFSSGSFFELDG 313
Query: 123 KLFC 126
+ FC
Sbjct: 314 RPFC 317
Score = 152 (58.6 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 40/128 (31%), Positives = 57/128 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L ++WH + C C L S F R G +C D+
Sbjct: 152 CASCQKPIAGK-VIHALGQSWHPEHFVCTHCKEELGSSPFFERNGLAYCSKDYHH----- 205
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PI DK +L + +TWH + C C + F ++
Sbjct: 206 -------LFSPR---CAYCAAPITDK-VLTAMNKTWHPEHFFCSHCGEVFGAEGFHEKDK 254
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 255 KPYCRKDF 262
>UNIPROTKB|F1NTC8 [details] [associations]
symbol:PDLIM5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
SUPFAM:SSF50156 GeneTree:ENSGT00700000104411 EMBL:AADN02009351
EMBL:AADN02009352 IPI:IPI00577840 Ensembl:ENSGALT00000037662
ArrayExpress:F1NTC8 Uniprot:F1NTC8
Length = 595
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C+ C++ IL + ++N L++TWH C C CH+ + + F E G +C D++
Sbjct: 478 CSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYY------ 530
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L +M C GCE PI D+FL L TWH C C C+ +L + F S+
Sbjct: 531 ------ALFGTM---CHGCEFPIEAGDRFL-EALGHTWHDTCFVCSVCNDSLEGQTFFSK 580
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 581 KDKPLCK 587
Score = 138 (53.6 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +++ F E G L+C
Sbjct: 419 CAQCNQVIRGPFLV-ALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCE---------- 467
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
V C+ C++ IL + ++N L++TWH C C CH+ + + F E G
Sbjct: 468 -----VCYEKFFAPECSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDG 521
Query: 123 KLFCRNDFF 131
+C D++
Sbjct: 522 DPYCETDYY 530
>UNIPROTKB|F1NIJ0 [details] [associations]
symbol:PDLIM5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0030018 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156
GeneTree:ENSGT00700000104411 OMA:SGLHANA EMBL:AADN02009351
EMBL:AADN02009352 IPI:IPI00822233 Ensembl:ENSGALT00000019937
ArrayExpress:F1NIJ0 Uniprot:F1NIJ0
Length = 597
Score = 167 (63.8 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/127 (32%), Positives = 63/127 (49%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C+ C++ IL + ++N L++TWH C C CH+ + + F E G +C D++
Sbjct: 480 CSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDGDPYCETDYY------ 532
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L +M C GCE PI D+FL L TWH C C C+ +L + F S+
Sbjct: 533 ------ALFGTM---CHGCEFPIEAGDRFL-EALGHTWHDTCFVCSVCNDSLEGQTFFSK 582
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 583 KDKPLCK 589
Score = 138 (53.6 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +++ F E G L+C
Sbjct: 421 CAQCNQVIRGPFLV-ALGKSWHPEEFNCAHCKTSMAYIGFVEEKGALYCE---------- 469
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
V C+ C++ IL + ++N L++TWH C C CH+ + + F E G
Sbjct: 470 -----VCYEKFFAPECSKCQRKILGE-VINALKQTWHVSCFVCVACHNPIRNNVFHLEDG 523
Query: 123 KLFCRNDFF 131
+C D++
Sbjct: 524 DPYCETDYY 532
>UNIPROTKB|E1BM14 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 EMBL:DAAA02032103
IPI:IPI00694370 RefSeq:NP_001178104.1 UniGene:Bt.107855
PRIDE:E1BM14 Ensembl:ENSBTAT00000014582 GeneID:783763
KEGG:bta:783763 NextBio:20926288 Uniprot:E1BM14
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>UNIPROTKB|E2RPC3 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355 OMA:CNENDAE
EMBL:AAEX03006892 RefSeq:XP_863668.2 Ensembl:ENSCAFT00000032214
GeneID:491340 KEGG:cfa:491340 Uniprot:E2RPC3
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>UNIPROTKB|P50458 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0009953 "dorsal/ventral
pattern formation" evidence=IEA] [GO:0021978 "telencephalon
regionalization" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:2000678 "negative regulation of transcription regulatory region
DNA binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
KO:K09373 GO:GO:0021978 GO:GO:0000988 eggNOG:COG5576 GO:GO:2000678
EMBL:U11701 EMBL:BC093662 EMBL:BC112185 EMBL:AK094511 EMBL:AF124735
IPI:IPI00032144 RefSeq:NP_004780.3 UniGene:Hs.696425
ProteinModelPortal:P50458 SMR:P50458 STRING:P50458
PhosphoSite:P50458 DMDM:8247936 PaxDb:P50458 PRIDE:P50458
DNASU:9355 Ensembl:ENST00000373615 GeneID:9355 KEGG:hsa:9355
UCSC:uc004boe.1 CTD:9355 GeneCards:GC09P126763 HGNC:HGNC:6594
MIM:603759 neXtProt:NX_P50458 PharmGKB:PA30365 HOGENOM:HOG000034022
HOVERGEN:HBG006262 InParanoid:P50458 OrthoDB:EOG4G4GQK
PhylomeDB:P50458 ChiTaRS:LHX2 GenomeRNAi:9355 NextBio:35033
Bgee:P50458 CleanEx:HS_LHX2 Genevestigator:P50458
GermOnline:ENSG00000106689 Uniprot:P50458
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>UNIPROTKB|C4TJC6 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 CTD:9355 OrthoDB:EOG4G4GQK OMA:CNENDAE EMBL:CU570921
EMBL:AB473486 RefSeq:NP_001163990.1 UniGene:Ssc.71156 STRING:C4TJC6
Ensembl:ENSSSCT00000006141 GeneID:100156063 KEGG:ssc:100156063
Uniprot:C4TJC6
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>MGI|MGI:96785 [details] [associations]
symbol:Lhx2 "LIM homeobox protein 2" species:10090 "Mus
musculus" [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=IPI] [GO:0001843
"neural tube closure" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005622 "intracellular" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007399 "nervous
system development" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007498 "mesoderm development" evidence=IMP] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0021978 "telencephalon regionalization"
evidence=IGI;IMP] [GO:0022008 "neurogenesis" evidence=IDA]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=IMP] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IGI] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:96785 GO:GO:0005634 GO:GO:0007411
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0021978 GO:GO:0000988 GO:GO:2000678 CTD:9355
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
EMBL:AF124734 EMBL:BC055741 IPI:IPI00129385 RefSeq:NP_034840.1
UniGene:Mm.142856 ProteinModelPortal:Q9Z0S2 SMR:Q9Z0S2
STRING:Q9Z0S2 PhosphoSite:Q9Z0S2 PRIDE:Q9Z0S2
Ensembl:ENSMUST00000000253 GeneID:16870 KEGG:mmu:16870
InParanoid:Q9Z0S2 OMA:CNENDAE NextBio:290834 Bgee:Q9Z0S2
CleanEx:MM_LHX2 Genevestigator:Q9Z0S2 GermOnline:ENSMUSG00000000247
Uniprot:Q9Z0S2
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>UNIPROTKB|D4A380 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670 KO:K09373 CTD:9355
OrthoDB:EOG4G4GQK UniGene:Rn.81063 EMBL:CH473983 IPI:IPI00950401
RefSeq:NP_001100041.1 SMR:D4A380 Ensembl:ENSRNOT00000064507
GeneID:296706 KEGG:rno:296706 NextBio:641689 Uniprot:D4A380
Length = 406
Score = 164 (62.8 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>UNIPROTKB|Q5M8V8 [details] [associations]
symbol:lmo2 "Rhombotin-2" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0005634 "nucleus" evidence=ISS] [GO:0030218
"erythrocyte differentiation" evidence=ISS] [GO:0003677 "DNA
binding" evidence=ISS] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030218
GO:GO:0001568 GeneTree:ENSGT00680000099670 GO:GO:0035162
HSSP:P25801 HOGENOM:HOG000232175 HOVERGEN:HBG054231 CTD:4005
eggNOG:NOG319108 KO:K15612 OrthoDB:EOG4001KG EMBL:BC087809
RefSeq:NP_001011238.1 UniGene:Str.14577 ProteinModelPortal:Q5M8V8
SMR:Q5M8V8 STRING:Q5M8V8 Ensembl:ENSXETT00000008646 GeneID:496679
KEGG:xtr:496679 Xenbase:XB-GENE-479144 InParanoid:Q5M8V8
OMA:TKLNEMM Bgee:Q5M8V8 Uniprot:Q5M8V8
Length = 158
Score = 157 (60.3 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAFEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>ZFIN|ZDB-GENE-040105-1 [details] [associations]
symbol:pxn "paxillin" species:7955 "Danio rerio"
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007519 "skeletal muscle tissue development" evidence=IGI]
[GO:0001756 "somitogenesis" evidence=IEP] [GO:0009790 "embryo
development" evidence=IEP] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-040105-1 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0001756 Gene3D:2.10.110.10 GO:GO:0007160 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 KO:K05760
CTD:5829 EMBL:AY515510 IPI:IPI00499179 RefSeq:NP_963882.1
UniGene:Dr.107449 UniGene:Dr.81472 ProteinModelPortal:Q6R3L1
SMR:Q6R3L1 STRING:Q6R3L1 PRIDE:Q6R3L1 GeneID:399546 KEGG:dre:399546
NextBio:20816604 ArrayExpress:Q6R3L1 Bgee:Q6R3L1 Uniprot:Q6R3L1
Length = 533
Score = 166 (63.5 bits), Expect = 1.7e-11, P = 1.7e-11
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + RTWH + C C + + F R+G+ +C D+
Sbjct: 300 CGACKKPIAGQ-VVTAMGRTWHPEHFVCTQCQEEIGSRNFFERDGQPYCEKDYH------ 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C+G PILDK ++ L++TWH + C C + F +EG
Sbjct: 353 ------SLFSPRCYYCSG---PILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEG 402
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 403 KAYCRKDYF 411
Score = 160 (61.4 bits), Expect = 7.8e-11, P = 7.8e-11
Identities = 38/124 (30%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L++TWH + C C + F +EGK +CR D+F F
Sbjct: 359 CYYCSGPILDK-VVTALDKTWHPEHFFCAQCGSFFGPEGFHEKEGKAYCRKDYFDM---F 414
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F EG
Sbjct: 415 APKCG------------GCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFEHEG 461
Query: 123 KLFC 126
+ +C
Sbjct: 462 QPYC 465
Score = 114 (45.2 bits), Expect = 7.0e-06, P = 7.0e-06
Identities = 30/128 (23%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F EG+ +C +
Sbjct: 418 CGGCARAILENYI-SALNSLWHPECFVCRECFTPFVNGSFFEHEGQPYCEAHYHER---- 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 473 --------RGSL---CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 520
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 521 KPYCQSCF 528
>WB|WBGene00016197 [details] [associations]
symbol:pxl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0055120 "striated muscle dense
body" evidence=IDA] [GO:0031430 "M band" evidence=IDA] [GO:0005912
"adherens junction" evidence=IDA] [GO:0043050 "pharyngeal pumping"
evidence=IMP] [GO:0002102 "podosome" evidence=IDA] [GO:0061061
"muscle structure development" evidence=IMP] [GO:0017166 "vinculin
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
CA C KPI+ + ++ L + WH + C +C L + F R G+ FC D+ +F
Sbjct: 176 CAACGKPIIGQVVI-ALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHN---QF 231
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I D+ ++V+ + +H +C C +C+ + F + G
Sbjct: 232 SP------------KCQGCHRAITDR-CVSVMNKNFHIECFTCAECNQPFGEDGFHEKNG 278
Query: 123 KLFCRNDFF 131
+ +C+ DFF
Sbjct: 279 QTYCKRDFF 287
Score = 149 (57.5 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I D+ ++V+ + +H +C C +C+ + F + G+ +C+ DFFR +
Sbjct: 235 CQGCHRAITDR-CVSVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFR--LFA 291
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
P C GC +PI F+ L WH DC C C + + F G
Sbjct: 292 PK-------------CNGCSQPITSNFI-TALGTHWHPDCFVCQHCGVSFNGASFFEHNG 337
Query: 123 KLFCRNDF 130
C +
Sbjct: 338 APLCERHY 345
Score = 96 (38.9 bits), Expect = 0.00042, P = 0.00042
Identities = 31/124 (25%), Positives = 45/124 (36%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC +PI F+ L WH DC C C + + F G C + S
Sbjct: 294 CNGCSQPITSNFI-TALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHYHESRGSI 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EG 122
S C G + ++ G R +H + RC C+H L+ F +
Sbjct: 353 CSQCR-GAINGRCVAAMG---------------RKFHPEHFRCSYCNHQLTKGTFKEVDR 396
Query: 123 KLFC 126
+ FC
Sbjct: 397 RPFC 400
>UNIPROTKB|Q09476 [details] [associations]
symbol:pxl-1 "Paxillin homolog 1" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 164 (62.8 bits), Expect = 1.8e-11, P = 1.8e-11
Identities = 35/129 (27%), Positives = 61/129 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
CA C KPI+ + ++ L + WH + C +C L + F R G+ FC D+ +F
Sbjct: 176 CAACGKPIIGQVVI-ALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDYHN---QF 231
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
C GC + I D+ ++V+ + +H +C C +C+ + F + G
Sbjct: 232 SP------------KCQGCHRAITDR-CVSVMNKNFHIECFTCAECNQPFGEDGFHEKNG 278
Query: 123 KLFCRNDFF 131
+ +C+ DFF
Sbjct: 279 QTYCKRDFF 287
Score = 149 (57.5 bits), Expect = 7.6e-10, P = 7.6e-10
Identities = 34/128 (26%), Positives = 55/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC + I D+ ++V+ + +H +C C +C+ + F + G+ +C+ DFFR +
Sbjct: 235 CQGCHRAITDR-CVSVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFR--LFA 291
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
P C GC +PI F+ L WH DC C C + + F G
Sbjct: 292 PK-------------CNGCSQPITSNFI-TALGTHWHPDCFVCQHCGVSFNGASFFEHNG 337
Query: 123 KLFCRNDF 130
C +
Sbjct: 338 APLCERHY 345
Score = 96 (38.9 bits), Expect = 0.00042, P = 0.00042
Identities = 31/124 (25%), Positives = 45/124 (36%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C GC +PI F+ L WH DC C C + + F G C + S
Sbjct: 294 CNGCSQPITSNFI-TALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHYHESRGSI 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EG 122
S C G + ++ G R +H + RC C+H L+ F +
Sbjct: 353 CSQCR-GAINGRCVAAMG---------------RKFHPEHFRCSYCNHQLTKGTFKEVDR 396
Query: 123 KLFC 126
+ FC
Sbjct: 397 RPFC 400
>UNIPROTKB|G3N0G6 [details] [associations]
symbol:LHX2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:2000678 "negative
regulation of transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0007498
"mesoderm development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0007411 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
GeneTree:ENSGT00680000099670 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 OMA:CNENDAE EMBL:DAAA02032103
Ensembl:ENSBTAT00000065104 Uniprot:G3N0G6
Length = 427
Score = 164 (62.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 53 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 112
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 113 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 158
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 159 KDSLVYCRLHF 169
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 45 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 104
Query: 129 DFF 131
D++
Sbjct: 105 DYY 107
>ZFIN|ZDB-GENE-051220-1 [details] [associations]
symbol:lhx2b "LIM homeobox 2b" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0007420 "brain development"
evidence=IMP] [GO:0007411 "axon guidance" evidence=IMP] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0030900 "forebrain
development" evidence=IMP] [GO:0031290 "retinal ganglion cell axon
guidance" evidence=IMP] [GO:0021537 "telencephalon development"
evidence=IMP] [GO:0007634 "optokinetic behavior" evidence=IMP]
[GO:0021554 "optic nerve development" evidence=IMP] [GO:0009416
"response to light stimulus" evidence=IMP] [GO:0071632 "optomotor
response" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0010468 "regulation of gene expression"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-051220-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043010 Gene3D:2.10.110.10 GO:GO:0010468
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0021537 GO:GO:0031290
GO:GO:0007634 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:CNENDAE
EMBL:AL929566 EMBL:BX005074 IPI:IPI00505332 RefSeq:NP_001035099.3
UniGene:Dr.16318 SMR:B0R107 Ensembl:ENSDART00000148020
GeneID:791744 KEGG:dre:791744 CTD:791744 NextBio:20930769
Uniprot:B0R107
Length = 427
Score = 164 (62.8 bits), Expect = 1.9e-11, P = 1.9e-11
Identities = 34/131 (25%), Positives = 67/131 (51%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 84 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 143
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S+S ++ + + +H +C C C+ L+ D
Sbjct: 144 QRCARCHLGISASEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 189
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 190 KDSLVYCRLHF 200
Score = 136 (52.9 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 20/63 (31%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+S + CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 76 ISGDRVALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 135
Query: 129 DFF 131
D++
Sbjct: 136 DYY 138
>UNIPROTKB|F1NU72 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0048037 "cofactor binding" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] [GO:0097067 "cellular
response to thyroid hormone stimulus" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190
GeneTree:ENSGT00680000099670 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 OMA:CEKRIRA
EMBL:AADN02073657 IPI:IPI00575087 Ensembl:ENSGALT00000000471
ArrayExpress:F1NU72 Uniprot:F1NU72
Length = 144
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 13 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 72
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 73 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 119
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 120 RYLLINSDIVCEQDIY 135
>UNIPROTKB|Q1LZ94 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9913 "Bos taurus"
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC116134 IPI:IPI00688250
RefSeq:NP_001069820.1 UniGene:Bt.17081 ProteinModelPortal:Q1LZ94
SMR:Q1LZ94 STRING:Q1LZ94 PRIDE:Q1LZ94 Ensembl:ENSBTAT00000009126
GeneID:614876 KEGG:bta:614876 CTD:4005 eggNOG:NOG319108
InParanoid:Q1LZ94 KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG
NextBio:20899332 Uniprot:Q1LZ94
Length = 158
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>UNIPROTKB|F1PKL3 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:CEKRIRA EMBL:AAEX03011393
EMBL:AAEX03011391 EMBL:AAEX03011392 EMBL:AAEX03011394
EMBL:AAEX03011395 Ensembl:ENSCAFT00000011428 Uniprot:F1PKL3
Length = 223
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 92 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 151
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 152 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 198
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 199 RYLLINSDIVCEQDIY 214
>UNIPROTKB|P25791 [details] [associations]
symbol:LMO2 "Rhombotin-2" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IEA] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IEA] [GO:0097067 "cellular response to
thyroid hormone stimulus" evidence=IDA] [GO:0007275 "multicellular
organismal development" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0070888 "E-box binding" evidence=IDA] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0000981 "sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0001102 "RNA polymerase II activating transcription factor
binding" evidence=IPI] [GO:0043425 "bHLH transcription factor
binding" evidence=IPI] [GO:0048037 "cofactor binding" evidence=IPI]
[GO:0042789 "mRNA transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IDA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007275 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0035162 GO:GO:0097067 GO:GO:0045647
GO:GO:0001228 PDB:2XJY PDB:2XJZ PDBsum:2XJY PDBsum:2XJZ
HOGENOM:HOG000232175 HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108
KO:K15612 OMA:CEKRIRA OrthoDB:EOG4001KG EMBL:X61118 EMBL:BC034041
EMBL:BC035607 EMBL:BC042426 EMBL:BC073973 EMBL:AF257211
IPI:IPI00016852 IPI:IPI00915342 IPI:IPI00926017 PIR:S29477
RefSeq:NP_001135787.1 RefSeq:NP_001135788.1 RefSeq:NP_005565.2
UniGene:Hs.34560 ProteinModelPortal:P25791 SMR:P25791 IntAct:P25791
MINT:MINT-233526 STRING:P25791 PhosphoSite:P25791 DMDM:132533
PRIDE:P25791 DNASU:4005 Ensembl:ENST00000257818
Ensembl:ENST00000395833 Ensembl:ENST00000411482 GeneID:4005
KEGG:hsa:4005 UCSC:uc001mvc.3 UCSC:uc010rem.2 GeneCards:GC11M033880
H-InvDB:HIX0009544 HGNC:HGNC:6642 HPA:CAB016258 MIM:180385
neXtProt:NX_P25791 PharmGKB:PA30408 InParanoid:P25791
PhylomeDB:P25791 ChiTaRS:LMO2 EvolutionaryTrace:P25791
GenomeRNAi:4005 NextBio:15712 Bgee:P25791 CleanEx:HS_LMO2
Genevestigator:P25791 GermOnline:ENSG00000135363 Uniprot:P25791
Length = 158
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>UNIPROTKB|F1SGS5 [details] [associations]
symbol:LMO2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=IEA] [GO:0070888 "E-box binding" evidence=IEA] [GO:0048037
"cofactor binding" evidence=IEA] [GO:0045647 "negative regulation
of erythrocyte differentiation" evidence=IEA] [GO:0043425 "bHLH
transcription factor binding" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0003682 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0048037 GO:GO:0001190 GeneTree:ENSGT00680000099670
GO:GO:0000977 GO:GO:0042789 GO:GO:0070888 GO:GO:0035162
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 OMA:CEKRIRA EMBL:CU463884
ProteinModelPortal:F1SGS5 SMR:F1SGS5 Ensembl:ENSSSCT00000014533
Uniprot:F1SGS5
Length = 158
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>MGI|MGI:102811 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10090 "Mus musculus"
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=ISO] [GO:0000981 "sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=ISO] [GO:0001190 "RNA
polymerase II transcription factor binding transcription factor
activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
"transcription factor complex" evidence=ISO] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0035162 "embryonic hemopoiesis"
evidence=IGI] [GO:0042789 "mRNA transcription from RNA polymerase
II promoter" evidence=ISO] [GO:0043234 "protein complex"
evidence=IPI] [GO:0043425 "bHLH transcription factor binding"
evidence=ISO] [GO:0045647 "negative regulation of erythrocyte
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:102811 GO:GO:0005634
GO:GO:0043234 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0003682 Gene3D:2.10.110.10 GO:GO:0035162 GO:GO:0045647
PDB:2L6Y PDB:2L6Z PDBsum:2L6Y PDBsum:2L6Z PDB:1J2O PDB:2LXD
PDBsum:1J2O PDBsum:2LXD HOGENOM:HOG000232175 HOVERGEN:HBG054231
CTD:4005 eggNOG:NOG319108 KO:K15612 OrthoDB:EOG4001KG ChiTaRS:LMO2
EMBL:M64360 EMBL:BC057880 IPI:IPI00114239 PIR:A39370
RefSeq:NP_001135808.1 RefSeq:NP_001135809.1 RefSeq:NP_032531.2
UniGene:Mm.29266 ProteinModelPortal:P25801 SMR:P25801
DIP:DIP-24247N IntAct:P25801 MINT:MINT-2567948 STRING:P25801
PhosphoSite:P25801 PRIDE:P25801 Ensembl:ENSMUST00000123437
Ensembl:ENSMUST00000163256 Ensembl:ENSMUST00000170926 GeneID:16909
KEGG:mmu:16909 InParanoid:P25801 EvolutionaryTrace:P25801
NextBio:290948 Bgee:P25801 CleanEx:MM_LMO2 Genevestigator:P25801
GermOnline:ENSMUSG00000032698 Uniprot:P25801
Length = 158
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>RGD|1307101 [details] [associations]
symbol:Lmo2 "LIM domain only 2" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0000981
"sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=ISO] [GO:0001190
"RNA polymerase II transcription factor binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0001228 "RNA polymerase II transcription
regulatory region sequence-specific DNA binding transcription
factor activity involved in positive regulation of transcription"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005667 "transcription factor complex"
evidence=ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0035162 "embryonic hemopoiesis" evidence=ISO] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] [GO:0043425 "bHLH
transcription factor binding" evidence=ISO] [GO:0045647 "negative
regulation of erythrocyte differentiation" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0048037 "cofactor
binding" evidence=ISO] [GO:0070888 "E-box binding" evidence=ISO]
[GO:0097067 "cellular response to thyroid hormone stimulus"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307101 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190 GO:GO:0000977
GO:GO:0042789 GO:GO:0070888 GO:GO:0035162 EMBL:CH473949
GO:GO:0097067 GO:GO:0045647 GO:GO:0001228 HOGENOM:HOG000232175
HOVERGEN:HBG054231 CTD:4005 eggNOG:NOG319108 KO:K15612 OMA:CEKRIRA
OrthoDB:EOG4001KG IPI:IPI00373656 RefSeq:NP_001032435.2
UniGene:Rn.155591 GeneID:362176 KEGG:rno:362176 NextBio:678912
EMBL:BC105772 RefSeq:NP_001231708.1 RefSeq:NP_001231709.1
RefSeq:NP_001231710.1 SMR:Q3KRD2 STRING:Q3KRD2 UCSC:RGD:1307101
InParanoid:Q3KRD2 Genevestigator:Q3KRD2 Uniprot:Q3KRD2
Length = 158
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>UNIPROTKB|F1LNA1 [details] [associations]
symbol:Lmo2 "Protein Lmo2" species:10116 "Rattus
norvegicus" [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=IEA] [GO:0001102 "RNA
polymerase II activating transcription factor binding"
evidence=IEA] [GO:0001190 "RNA polymerase II transcription factor
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0001228 "RNA
polymerase II transcription regulatory region sequence-specific DNA
binding transcription factor activity involved in positive
regulation of transcription" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0035162 "embryonic hemopoiesis" evidence=IEA] [GO:0042789 "mRNA
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043425 "bHLH transcription factor binding" evidence=IEA]
[GO:0045647 "negative regulation of erythrocyte differentiation"
evidence=IEA] [GO:0048037 "cofactor binding" evidence=IEA]
[GO:0070888 "E-box binding" evidence=IEA] [GO:0097067 "cellular
response to thyroid hormone stimulus" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307101 GO:GO:0046872 GO:GO:0008270 GO:GO:0003682 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0048037 GO:GO:0001190
GeneTree:ENSGT00680000099670 GO:GO:0000977 GO:GO:0042789
GO:GO:0070888 GO:GO:0035162 GO:GO:0097067 GO:GO:0045647
GO:GO:0001228 CTD:4005 KO:K15612 IPI:IPI00373656
RefSeq:NP_001032435.2 UniGene:Rn.155591 ProteinModelPortal:F1LNA1
SMR:F1LNA1 Ensembl:ENSRNOT00000012625 GeneID:362176 KEGG:rno:362176
NextBio:678912 ArrayExpress:F1LNA1 Uniprot:F1LNA1
Length = 220
Score = 156 (60.0 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 36/136 (26%), Positives = 64/136 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 89 LLTCGGCQQNIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 148
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+K I + + V ++ +H +C +C C H + D
Sbjct: 149 L---FGQD---GL-------CASCDKRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 195
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 196 RYLLINSDIVCEQDIY 211
>UNIPROTKB|P53667 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045773 "positive regulation of axon extension" evidence=ISS]
[GO:0043005 "neuron projection" evidence=ISS] [GO:0030036 "actin
cytoskeleton organization" evidence=TAS] [GO:0007399 "nervous
system development" evidence=TAS] [GO:0004672 "protein kinase
activity" evidence=NAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007266 "Rho protein signal transduction"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0007411 "axon
guidance" evidence=TAS] [GO:0004674 "protein serine/threonine
kinase activity" evidence=TAS] [GO:0031072 "heat shock protein
binding" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IDA] [GO:0032233 "positive regulation of actin filament
bundle assembly" evidence=IDA] [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0046872
GO:GO:0030036 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0008270 GO:GO:0043005 Pathway_Interaction_DB:caspase_pathway
BRENDA:2.7.11.1 GO:GO:0005925 Reactome:REACT_127416
Gene3D:2.10.110.10 GO:GO:0007266 GO:GO:0045773 SUPFAM:SSF50156
GO:GO:0051444 EMBL:CH471200 Orphanet:904 GO:GO:0031072
EMBL:AC005056 EMBL:U63721 KO:K05743 GO:GO:0032233 CTD:3984
HOGENOM:HOG000013121 HOVERGEN:HBG052328 EMBL:D26309 EMBL:U62293
EMBL:AF134379 EMBL:AK300382 EMBL:AC005057 IPI:IPI00216433
IPI:IPI00216434 IPI:IPI00291702 PIR:JP0078 RefSeq:NP_001191355.1
RefSeq:NP_002305.1 UniGene:Hs.647035 PDB:3S95 PDBsum:3S95
ProteinModelPortal:P53667 SMR:P53667 DIP:DIP-31605N IntAct:P53667
MINT:MINT-2833166 STRING:P53667 PhosphoSite:P53667 DMDM:90185240
PaxDb:P53667 PRIDE:P53667 DNASU:3984 Ensembl:ENST00000336180
Ensembl:ENST00000419043 Ensembl:ENST00000435201
Ensembl:ENST00000538333 Ensembl:ENST00000570926
Ensembl:ENST00000571928 Ensembl:ENST00000572388
Ensembl:ENST00000576167 GeneID:3984 KEGG:hsa:3984 UCSC:uc003uaa.2
GeneCards:GC07P073497 HGNC:HGNC:6613 HPA:HPA028064 HPA:HPA028516
MIM:601329 neXtProt:NX_P53667 PharmGKB:PA30386 InParanoid:P53667
PhylomeDB:P53667 BindingDB:P53667 ChEMBL:CHEMBL3836
EvolutionaryTrace:P53667 GenomeRNAi:3984 NextBio:15626
ArrayExpress:P53667 Bgee:P53667 CleanEx:HS_LIMK1
Genevestigator:P53667 GermOnline:ENSG00000106683 Uniprot:P53667
Length = 647
Score = 166 (63.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++ R+
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + D
Sbjct: 82 E------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 130 SKLYCGHCYY 139
Score = 146 (56.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC DC +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>RGD|71076 [details] [associations]
symbol:Lhx2 "LIM homeobox 2" species:10116 "Rattus norvegicus"
[GO:0000988 "protein binding transcription factor activity"
evidence=IEA] [GO:0001076 "RNA polymerase II transcription factor
binding transcription factor activity" evidence=ISO] [GO:0001843
"neural tube closure" evidence=IEA;ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0007411 "axon guidance"
evidence=IEA;ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007498 "mesoderm development" evidence=IEA;ISO] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009953 "dorsal/ventral pattern
formation" evidence=IEA;ISO] [GO:0021537 "telencephalon development"
evidence=ISO] [GO:0021978 "telencephalon regionalization"
evidence=IEA;ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030182 "neuron differentiation" evidence=IEP;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISO] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893 GO:GO:0030182
GO:GO:0007498 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843 GO:GO:0009953
eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988 GO:GO:2000678
HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804 IPI:IPI00199572
PIR:A47179 UniGene:Rn.81063 ProteinModelPortal:P36198 SMR:P36198
STRING:P36198 UCSC:RGD:71076 InParanoid:P36198 ArrayExpress:P36198
Genevestigator:P36198 GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 163 (62.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S S ++ + + +H +C C C+ L+ D
Sbjct: 112 QRCARCHLGISESEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDSLVYCRLHF 168
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 44 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 103
Query: 129 DFF 131
D++
Sbjct: 104 DYY 106
>UNIPROTKB|P36198 [details] [associations]
symbol:Lhx2 "LIM/homeobox protein Lhx2" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71076 GO:GO:0005634 GO:GO:0007411 GO:GO:0045893
GO:GO:0030182 GO:GO:0007498 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001843
GO:GO:0009953 eggNOG:NOG240987 GO:GO:0021978 GO:GO:0000988
GO:GO:2000678 HOGENOM:HOG000034022 HOVERGEN:HBG006262 EMBL:L06804
IPI:IPI00199572 PIR:A47179 UniGene:Rn.81063
ProteinModelPortal:P36198 SMR:P36198 STRING:P36198 UCSC:RGD:71076
InParanoid:P36198 ArrayExpress:P36198 Genevestigator:P36198
GermOnline:ENSRNOG00000010551 Uniprot:P36198
Length = 426
Score = 163 (62.4 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 34/131 (25%), Positives = 66/131 (50%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRS-PV 61
CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+ D++R V
Sbjct: 52 CAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRRFSV 111
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+ + C +G+S S ++ + + +H +C C C+ L+ D
Sbjct: 112 QRCARCHLGISESEMV--------------MRARDLVYHLNCFTCTTCNKMLTTGDHFGM 157
Query: 120 REGKLFCRNDF 130
++ ++CR F
Sbjct: 158 KDSLVYCRLHF 168
Score = 138 (53.6 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRN 128
+SS CAGC I D++ L +++ WH C++C +C L + CFS++G ++C+
Sbjct: 44 ISSDRAALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKE 103
Query: 129 DFF 131
D++
Sbjct: 104 DYY 106
>UNIPROTKB|E9PC47 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9606 "Homo
sapiens" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR001478 InterPro:IPR001781
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 SUPFAM:SSF56112
GO:GO:0008270 GO:GO:0004672 Gene3D:2.10.110.10 SUPFAM:SSF50156
EMBL:AC005056 EMBL:AC005057 HGNC:HGNC:6613 OMA:CFRCCEC
IPI:IPI00924775 ProteinModelPortal:E9PC47 SMR:E9PC47 PRIDE:E9PC47
Ensembl:ENST00000418310 ArrayExpress:E9PC47 Bgee:E9PC47
Uniprot:E9PC47
Length = 677
Score = 166 (63.5 bits), Expect = 2.6e-11, P = 2.6e-11
Identities = 38/130 (29%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC DC +LS + + ++G+LFC+ D++ R+
Sbjct: 55 CASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQYYEKDGQLFCKKDYW---ARYG 111
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + D
Sbjct: 112 E------------SCHGCSEQITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 159
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 160 SKLYCGHCYY 169
Score = 145 (56.1 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 29/74 (39%), Positives = 40/74 (54%)
Query: 58 RSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC 117
R+P R G S L CA C + I D L L WHADC RC DC +LS +
Sbjct: 35 RAPSR-TLGRAAPAPGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCDCSASLSHQY 93
Query: 118 FSREGKLFCRNDFF 131
+ ++G+LFC+ D++
Sbjct: 94 YEKDGQLFCKKDYW 107
>UNIPROTKB|F1NXY2 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719
InterPro:IPR001245 InterPro:IPR001478 InterPro:IPR001781
InterPro:IPR011009 InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109
PROSITE:PS00107 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 GO:GO:0005524
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0004672
Gene3D:2.10.110.10 SUPFAM:SSF50156 GeneTree:ENSGT00530000063025
EMBL:AADN02026078 EMBL:AADN02026079 IPI:IPI00819181
Ensembl:ENSGALT00000040584 ArrayExpress:F1NXY2 Uniprot:F1NXY2
Length = 643
Score = 165 (63.1 bits), Expect = 3.0e-11, P = 3.0e-11
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+L+C+ D++ RF
Sbjct: 7 CASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYW---ARFG 63
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
C GC + I ++ E+ +H +C C +C + D
Sbjct: 64 E------------LCHGCAEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVER 111
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 112 SKLYCGHCYY 121
>UNIPROTKB|F1NVM7 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0031072 "heat shock protein binding"
evidence=IEA] [GO:0032233 "positive regulation of actin filament
bundle assembly" evidence=IEA] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0045773 "positive regulation of axon extension"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 SUPFAM:SSF50156
GO:GO:0051444 GeneTree:ENSGT00530000063025 GO:GO:0032233
IPI:IPI00573215 OMA:CFRCCEC EMBL:AADN02026078 EMBL:AADN02026079
Ensembl:ENSGALT00000001611 ArrayExpress:F1NVM7 Uniprot:F1NVM7
Length = 648
Score = 165 (63.1 bits), Expect = 3.1e-11, P = 3.1e-11
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+L+C+ D++ RF
Sbjct: 12 CASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYW---ARFG 68
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
C GC + I ++ E+ +H +C C +C + D
Sbjct: 69 E------------LCHGCAEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVER 116
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 117 SKLYCGHCYY 126
>UNIPROTKB|Q8QFP8 [details] [associations]
symbol:LIMK1 "LIM domain kinase 1" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004674
"protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0030426 "growth cone" evidence=IEA] Pfam:PF00595
Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674
GO:GO:0008270 GO:GO:0030426 Gene3D:2.10.110.10 SUPFAM:SSF50156
KO:K05743 EMBL:AB073752 IPI:IPI00573215 RefSeq:NP_989462.1
UniGene:Gga.3 ProteinModelPortal:Q8QFP8 STRING:Q8QFP8 GeneID:373922
KEGG:gga:373922 CTD:3984 HOGENOM:HOG000013121 HOVERGEN:HBG052328
InParanoid:Q8QFP8 OrthoDB:EOG41C6VP NextBio:20813454 Uniprot:Q8QFP8
Length = 662
Score = 165 (63.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 36/130 (27%), Positives = 60/130 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+L+C+ D++ RF
Sbjct: 26 CASCGQGIFDGQYLQALNADWHADCFRCGECGASLSHQYYEKDGRLYCKKDYW---ARFG 82
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
C GC + I ++ E+ +H +C C +C + D
Sbjct: 83 E------------LCHGCAEQITKGLVMVAGEQKYHPECFSCLNCRAFIGDGDTYALVER 130
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 131 SKLYCGHCYY 140
>ZFIN|ZDB-GENE-081105-153 [details] [associations]
symbol:lhx8b "LIM homeobox 8b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 Pfam:PF00046 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-081105-153 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050 EMBL:CR388090
IPI:IPI00635015 Ensembl:ENSDART00000061776 Uniprot:F1QST6
Length = 295
Score = 158 (60.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 42/128 (32%), Positives = 62/128 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFFRSPVR 62
C C + ILD+ LL V + WHA C+ C C TLS++ C+ RE ++FC+ +FR R
Sbjct: 24 CTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHYFR---R 80
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDK-FLLNVLERTWHADCVRCYDCHHTLSD-KCFSR 120
F + C SC C + + ++ +H C C+ C LS + F+
Sbjct: 81 FQTWC----------SC--CRETLHSSDWVHRAKGNVYHLACFSCFSCKRQLSTGEEFAL 128
Query: 121 EG-KLFCR 127
G KL CR
Sbjct: 129 VGEKLLCR 136
Score = 128 (50.1 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--CFSREGKLFCRNDFF 131
C C + ILD+ LL V + WHA C+ C C TLS++ C+ RE ++FC+ +F
Sbjct: 24 CTRCREHILDRHLLKVNDMCWHARCLSCSVCQTTLSEQTTCYVREREIFCKLHYF 78
>UNIPROTKB|F1MZP2 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] [GO:0033628 "regulation of cell
adhesion mediated by integrin" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0002102 "podosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 InterPro:IPR017305 PIRSF:PIRSF037881
EMBL:DAAA02041802 EMBL:DAAA02041803 IPI:IPI00691421
UniGene:Bt.64569 Ensembl:ENSBTAT00000050762 ArrayExpress:F1MZP2
Uniprot:F1MZP2
Length = 386
Score = 161 (61.7 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 37/124 (29%), Positives = 59/124 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C PILDK +L + +TWH + C C ++ F ++ K +CR DF
Sbjct: 211 CAYCAAPILDK-VLTAMNQTWHPEHFFCAHCGEVFGEEGFHEKDKKPYCRKDF------- 262
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
+G+ + C GC +P+L+ +L + + WH +C C +C S F +G
Sbjct: 263 -----LGMFAPR---CGGCNRPVLENYL-SAMGTVWHPECFVCGECFSGFSTGSFFELDG 313
Query: 123 KLFC 126
+ FC
Sbjct: 314 RPFC 317
Score = 155 (59.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 40/128 (31%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL-SDKCFSREGKLFCRNDFFRSPVRF 63
CA C+KPI K +++ L + WH + C C + S F R G +C D+
Sbjct: 152 CASCQKPIAGK-VIHALGQAWHPEHFVCAHCKAEIGSSPFFERSGLAYCAEDYHH----- 205
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S CA C PILDK +L + +TWH + C C ++ F ++
Sbjct: 206 -------LFSPR---CAYCAAPILDK-VLTAMNQTWHPEHFFCAHCGEVFGEEGFHEKDK 254
Query: 123 KLFCRNDF 130
K +CR DF
Sbjct: 255 KPYCRKDF 262
Score = 106 (42.4 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 22/78 (28%), Positives = 36/78 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC +P+L+ +L + + WH +C C +C S F +G+ FC + +
Sbjct: 270 CGGCNRPVLENYL-SAMGTVWHPECFVCGECFSGFSTGSFFELDGRPFCELHYHQRRGTL 328
Query: 64 PSGCGVGLSSSMLISCAG 81
GCG ++ IS G
Sbjct: 329 CHGCGQPITGRC-ISAMG 345
>UNIPROTKB|E1BRV9 [details] [associations]
symbol:LMX1B "LIM/homeobox protein LMX-1.2" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0002930
"trabecular meshwork development" evidence=IEA] [GO:0008219 "cell
death" evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0021587 "cerebellum morphogenesis" evidence=IEA] [GO:0021954
"central nervous system neuron development" evidence=IEA]
[GO:0030199 "collagen fibril organization" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0035108 "limb
morphogenesis" evidence=IEA] [GO:0035265 "organ growth"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0071542
"dopaminergic neuron differentiation" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008283 GO:GO:0008219 GO:GO:0008270
GO:GO:0030199 GO:GO:0045944 Gene3D:2.10.110.10 GO:GO:0035265
GeneTree:ENSGT00700000104050 EMBL:AADN02026296 EMBL:AADN02026297
EMBL:AADN02026298 EMBL:AADN02031658 IPI:IPI00821477
Ensembl:ENSGALT00000038661 Uniprot:E1BRV9
Length = 85
Score = 154 (59.3 bits), Expect = 3.5e-11, P = 3.5e-11
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 60 PVRF-PSGCGVGLSSSM-LIS--CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
P+R P+ GV L S + I C GC++PI D+FL+ V E +WH +C++C C L+
Sbjct: 11 PLRSGPATLGVLLGSGVPRIQAVCEGCQRPI-DRFLMRVNESSWHEECLQCAVCQQALTT 69
Query: 116 KCFSREGKLFCRNDF 130
C+ R+ KL+C+ D+
Sbjct: 70 SCYFRDRKLYCKQDY 84
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 22/52 (42%), Positives = 36/52 (69%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 56
C GC++PI D+FL+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 34 CEGCQRPI-DRFLMRVNESSWHEECLQCAVCQQALTTSCYFRDRKLYCKQDY 84
>UNIPROTKB|Q0VFX8 [details] [associations]
symbol:CRIP2 "Cysteine-rich protein 2" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:BC118323
IPI:IPI00693776 RefSeq:NP_001073117.1 UniGene:Bt.4056
ProteinModelPortal:Q0VFX8 SMR:Q0VFX8 PRIDE:Q0VFX8 GeneID:780821
KEGG:bta:780821 CTD:1397 HOVERGEN:HBG051143 NextBio:20924501
Uniprot:Q0VFX8
Length = 208
Score = 103 (41.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 24/86 (27%), Positives = 39/86 (45%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRS 59
M C C+K + ++ L + WH C+RC C TL+ + +GK FC + +
Sbjct: 1 MASKCPKCDKTVYFAEKVSSLGKDWHRFCLRCEHCSKTLTPGGHAEHDGKPFCHKPCYAT 60
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKP 85
+ P G +G + S + EKP
Sbjct: 61 -LFGPKGVNIGGAGSYIYEKPSAEKP 85
Score = 69 (29.3 bits), Expect = 3.8e-11, Sum P(2) = 3.8e-11
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFC 126
C C K + + L + WH C+RC C TL+ + +G+ +C
Sbjct: 126 CPRCNKRVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
>WB|WBGene00002988 [details] [associations]
symbol:lim-6 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0030421 "defecation"
evidence=IMP] [GO:0060756 "foraging behavior" evidence=IMP]
[GO:0030182 "neuron differentiation" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0009449 "gamma-aminobutyric acid
biosynthetic process" evidence=IMP] [GO:0010468 "regulation of gene
expression" evidence=IMP] [GO:0061038 "uterus morphogenesis"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007409 GO:GO:0010468 GO:GO:0030421
GeneTree:ENSGT00700000104050 GO:GO:0009449 eggNOG:NOG243427
GO:GO:0061038 EMBL:FO080324 GeneID:180459 KEGG:cel:CELE_K03E6.1
CTD:180459 GO:GO:0060756 RefSeq:NP_001256980.1
ProteinModelPortal:Q21192 SMR:Q21192 PaxDb:Q21192
EnsemblMetazoa:K03E6.1b UCSC:K03E6.1 WormBase:K03E6.1b
HOGENOM:HOG000018451 InParanoid:Q21192 OMA:HGNIYCE NextBio:909480
ArrayExpress:Q21192 Uniprot:Q21192
Length = 316
Score = 158 (60.7 bits), Expect = 4.0e-11, P = 4.0e-11
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD--KCFSREGKLFCRNDFFRSPVR 62
C+GC I D+++ V+E ++H C+RC C +LS KCFSR G ++C +D
Sbjct: 42 CSGCGCLIKDRYIYRVMEDSYHESCLRCSCCQLSLSSFKKCFSRHGNIYCEHDH------ 95
Query: 63 FPSGCGVGLSSSMLIS--CAGCEKPILDKFLLNVLE-RTWHADCVRCYDCHH--TLSDKC 117
ML C C +L +++ + +HA C C C L D+
Sbjct: 96 -----------QMLYGKRCRRCMTLLLPTDIVHRVHFMYYHAQCFSCCSCQRPFNLGDEY 144
Query: 118 FSREGKLFCRNDF 130
+G++FCRND+
Sbjct: 145 HVFDGEVFCRNDY 157
>UNIPROTKB|E7EMK8 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC004263
HGNC:HGNC:9718 ChiTaRS:PXN IPI:IPI00941515
ProteinModelPortal:E7EMK8 SMR:E7EMK8 PRIDE:E7EMK8
Ensembl:ENST00000397506 UCSC:uc001txu.3 ArrayExpress:E7EMK8
Bgee:E7EMK8 Uniprot:E7EMK8
Length = 403
Score = 160 (61.4 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 170 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 223
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 224 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 272
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 273 KAYCRKDYF 281
Score = 156 (60.0 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 229 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 284
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 285 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 331
Query: 123 KLFC 126
+ +C
Sbjct: 332 QPYC 335
Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 288 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 339
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 340 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 390
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 391 KPYCQNCF 398
>MGI|MGI:102784 [details] [associations]
symbol:Tgfb1i1 "transforming growth factor beta 1 induced
transcript 1" species:10090 "Mus musculus" [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0009408 "response to heat" evidence=ISO]
[GO:0010718 "positive regulation of epithelial to mesenchymal
transition" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016331 "morphogenesis of embryonic
epithelium" evidence=IMP] [GO:0030054 "cell junction" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0030511
"positive regulation of transforming growth factor beta receptor
signaling pathway" evidence=ISO] [GO:0030512 "negative regulation
of transforming growth factor beta receptor signaling pathway"
evidence=ISO] [GO:0030579 "ubiquitin-dependent SMAD protein
catabolic process" evidence=ISO] [GO:0030855 "epithelial cell
differentiation" evidence=IGI] [GO:0045165 "cell fate commitment"
evidence=IGI] [GO:0045599 "negative regulation of fat cell
differentiation" evidence=IGI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048495 "Roundabout binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0070411 "I-SMAD binding" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102784 GO:GO:0005737 GO:GO:0045893 GO:GO:0016055
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0003713
GO:GO:0010718 GO:GO:0030511 GO:GO:0045599 GO:GO:0031012
GO:GO:0016363 GO:GO:0016331 GO:GO:0045165 GO:GO:0030512
GO:GO:0030855 GO:GO:0030579 HSSP:O60711 eggNOG:NOG267887
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
OMA:TAGEQKE OrthoDB:EOG48GW35 EMBL:L22482 EMBL:AF083064
EMBL:DQ143891 EMBL:DQ143892 EMBL:DQ143893 EMBL:DQ143894
EMBL:DQ143895 EMBL:DQ143896 EMBL:DQ143897 EMBL:DQ143898
EMBL:DQ143899 EMBL:DQ143900 EMBL:AK156423 EMBL:AK158409
EMBL:BC002049 EMBL:BC056362 IPI:IPI00123274 IPI:IPI00652166
IPI:IPI00653891 IPI:IPI00654035 IPI:IPI00828289 IPI:IPI00848883
IPI:IPI00849982 IPI:IPI00850187 IPI:IPI00850542 IPI:IPI00850722
PIR:A55071 RefSeq:NP_033391.1 UniGene:Mm.3248
ProteinModelPortal:Q62219 SMR:Q62219 IntAct:Q62219 STRING:Q62219
PhosphoSite:Q62219 PaxDb:Q62219 PRIDE:Q62219
Ensembl:ENSMUST00000070656 Ensembl:ENSMUST00000163609
Ensembl:ENSMUST00000164710 Ensembl:ENSMUST00000167965
Ensembl:ENSMUST00000169919 GeneID:21804 KEGG:mmu:21804
UCSC:uc009jyl.1 UCSC:uc009jym.1 UCSC:uc009jyn.1 UCSC:uc009jyo.1
UCSC:uc009jyp.1 InParanoid:Q62219 NextBio:301180 Bgee:Q62219
Genevestigator:Q62219 Uniprot:Q62219
Length = 461
Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF + +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ--LFA 343
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 344 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 149 (57.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C TL F ++G FC +F RF
Sbjct: 228 CGSCNKPIAGQ-VVTALGRAWHPEHFLCSGCSTTLGGSSFFEKDGAPFCPECYFE---RF 283
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C +PI K ++ L WH + C C ++ F REG
Sbjct: 284 SPRCGF------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREG 330
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 331 RPYCRRDF 338
Score = 131 (51.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 38/128 (29%), Positives = 53/128 (41%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFHAQ---- 400
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 401 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 448
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 449 KPYCQPCF 456
>RGD|620173 [details] [associations]
symbol:Tgfb1i1 "transforming growth factor beta 1 induced
transcript 1" species:10116 "Rattus norvegicus" [GO:0003713
"transcription coactivator activity" evidence=IEA;ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005622 "intracellular"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=ISO;TAS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009408 "response to heat" evidence=IDA] [GO:0010718 "positive
regulation of epithelial to mesenchymal transition"
evidence=IEA;ISO] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0016331 "morphogenesis of embryonic epithelium"
evidence=IEA;ISO] [GO:0016363 "nuclear matrix" evidence=IEA]
[GO:0030511 "positive regulation of transforming growth factor beta
receptor signaling pathway" evidence=IEA;ISO] [GO:0030512 "negative
regulation of transforming growth factor beta receptor signaling
pathway" evidence=IEA;ISO] [GO:0030579 "ubiquitin-dependent SMAD
protein catabolic process" evidence=IEA;ISO] [GO:0030855
"epithelial cell differentiation" evidence=IEA;ISO] [GO:0031012
"extracellular matrix" evidence=IEA;ISO] [GO:0045165 "cell fate
commitment" evidence=IEA;ISO] [GO:0045599 "negative regulation of
fat cell differentiation" evidence=IEA;ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0048495 "Roundabout binding" evidence=IEA;ISO] [GO:0050681
"androgen receptor binding" evidence=IEA;ISO] [GO:0070411 "I-SMAD
binding" evidence=ISO;IPI] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:620173
GO:GO:0005737 GO:GO:0030154 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0009408
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0016363
HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
EMBL:CV078574 EMBL:AF314960 IPI:IPI00366051 RefSeq:NP_001178769.1
UniGene:Rn.103260 ProteinModelPortal:Q99PD6 STRING:Q99PD6
PhosphoSite:Q99PD6 Ensembl:ENSRNOT00000054980 GeneID:84574
KEGG:rno:84574 UCSC:RGD:620173 NextBio:617115 ArrayExpress:Q99PD6
Genevestigator:Q99PD6 Uniprot:Q99PD6
Length = 461
Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF + +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ--LFA 343
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 344 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 149 (57.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C TL F ++G FC +F RF
Sbjct: 228 CGSCNKPIAGQ-VVTALGRAWHPEHFLCRGCSTTLGGSSFFEKDGAPFCPECYFE---RF 283
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C +PI K ++ L WH + C C ++ F REG
Sbjct: 284 SPRCGF------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREG 330
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 331 RPYCRRDF 338
Score = 131 (51.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 38/128 (29%), Positives = 53/128 (41%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFHAQ---- 400
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 401 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 448
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 449 KPYCQPCF 456
>UNIPROTKB|Q99PD6 [details] [associations]
symbol:Tgfb1i1 "Transforming growth factor beta-1-induced
transcript 1 protein" species:10116 "Rattus norvegicus" [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:620173
GO:GO:0005737 GO:GO:0030154 GO:GO:0016055 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 GO:GO:0009408
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 GO:GO:0016363
HSSP:O60711 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 InterPro:IPR017305 PIRSF:PIRSF037881 CTD:7041
EMBL:CV078574 EMBL:AF314960 IPI:IPI00366051 RefSeq:NP_001178769.1
UniGene:Rn.103260 ProteinModelPortal:Q99PD6 STRING:Q99PD6
PhosphoSite:Q99PD6 Ensembl:ENSRNOT00000054980 GeneID:84574
KEGG:rno:84574 UCSC:RGD:620173 NextBio:617115 ArrayExpress:Q99PD6
Genevestigator:Q99PD6 Uniprot:Q99PD6
Length = 461
Score = 161 (61.7 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 40/128 (31%), Positives = 56/128 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C +PI K ++ L WH + C C ++ F REG+ +CR DF + +
Sbjct: 287 CGFCNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREGRPYCRRDFLQ--LFA 343
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREG 122
P C GC+ PILD ++ + L WH DC C +C S F EG
Sbjct: 344 PR-------------CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEG 389
Query: 123 KLFCRNDF 130
+ C N F
Sbjct: 390 RPLCENHF 397
Score = 149 (57.5 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 39/128 (30%), Positives = 54/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C KPI + ++ L R WH + C C TL F ++G FC +F RF
Sbjct: 228 CGSCNKPIAGQ-VVTALGRAWHPEHFLCRGCSTTLGGSSFFEKDGAPFCPECYFE---RF 283
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
CG C +PI K ++ L WH + C C ++ F REG
Sbjct: 284 SPRCGF------------CNQPIRHK-MVTALGTHWHPEHFCCVSCGEPFGEEGFHEREG 330
Query: 123 KLFCRNDF 130
+ +CR DF
Sbjct: 331 RPYCRRDF 338
Score = 131 (51.2 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 38/128 (29%), Positives = 53/128 (41%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD-KCFSREGKLFCRNDFFRSPVRF 63
C GC+ PILD ++ + L WH DC C +C S F EG+ C N F
Sbjct: 346 CQGCQGPILDNYI-SALSALWHPDCFVCRECLAPFSGGSFFEHEGRPLCENHFHAQ---- 400
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REG 122
S+ CA C P+ + ++ L R +H D C C L+ F R
Sbjct: 401 --------RGSL---CATCGLPVTGR-CVSALGRRFHPDHFTCTFCLRPLTKGSFQERAS 448
Query: 123 KLFCRNDF 130
K +C+ F
Sbjct: 449 KPYCQPCF 456
>UNIPROTKB|Q90XH3 [details] [associations]
symbol:lmo2 "Rhombotin-2" species:8355 "Xenopus laevis"
[GO:0005634 "nucleus" evidence=ISS] [GO:0030218 "erythrocyte
differentiation" evidence=IGI] [GO:0003677 "DNA binding"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0030218 HSSP:P25801
HOVERGEN:HBG054231 CTD:4005 KO:K15612 EMBL:AF374473 EMBL:BC097502
RefSeq:NP_001081112.1 UniGene:Xl.9549 ProteinModelPortal:Q90XH3
SMR:Q90XH3 GeneID:394388 KEGG:xla:394388 Xenbase:XB-GENE-6254426
Uniprot:Q90XH3
Length = 158
Score = 152 (58.6 bits), Expect = 5.8e-11, P = 5.8e-11
Identities = 35/136 (25%), Positives = 63/136 (46%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFR 58
L++C GC++ I D++ L +++ WH DC+ C C L + + + + G+ CR D+ R
Sbjct: 27 LLTCGGCQQSIGDRYFLKAIDQYWHEDCLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLR 86
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILD-KFLLNVLERTWHADCVRCYDC--HHTLSD 115
F GL CA C+ I + + V ++ +H +C +C C H + D
Sbjct: 87 L---FGQD---GL-------CASCDNRIRAYEMTMRVKDKVYHLECFKCAACQKHFCVGD 133
Query: 116 KCFSREGKLFCRNDFF 131
+ + C D +
Sbjct: 134 RYLLINSDIVCEQDIY 149
>FB|FBgn0052105 [details] [associations]
symbol:CG32105 species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 EMBL:AE014296 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
eggNOG:NOG243427 HSSP:P50480 EMBL:BT003467 RefSeq:NP_729801.1
UniGene:Dm.15353 SMR:Q9VTW5 IntAct:Q9VTW5 MINT:MINT-307196
EnsemblMetazoa:FBtr0075953 GeneID:39406 KEGG:dme:Dmel_CG32105
UCSC:CG32105-RB FlyBase:FBgn0052105 InParanoid:Q9VTW5 OMA:CCHAILP
OrthoDB:EOG4BCC40 GenomeRNAi:39406 NextBio:813485 Uniprot:Q9VTW5
Length = 640
Score = 162 (62.1 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 42/129 (32%), Positives = 63/129 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRS-PVRF 63
C GC + I D+FL+NV + WH C+ C C L C+ R KL+C+ D+ R V+
Sbjct: 275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDYDRLFGVKC 334
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSRE 121
S C L +++ +PI F+ +H C CY C L ++ R+
Sbjct: 335 SSCCHAILPQELVM------RPI-PNFV-------FHLPCFVCYACRLPLQKGEQFMLRD 380
Query: 122 GKLFC-RND 129
G+LFC R+D
Sbjct: 381 GQLFCYRHD 389
Score = 130 (50.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
C GC + I D+FL+NV + WH C+ C C L C+ R KL+C+ D+
Sbjct: 275 CEGCGQKIHDRFLMNVGDANWHEQCLACCYCGMQLHHTCYVRNSKLYCKMDY 326
>RGD|62055 [details] [associations]
symbol:Limk1 "LIM domain kinase 1" species:10116 "Rattus
norvegicus" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=IEA;ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005925 "focal
adhesion" evidence=IEA;ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0031072 "heat shock protein binding" evidence=IEA;ISO]
[GO:0032233 "positive regulation of actin filament bundle assembly"
evidence=IEA;ISO] [GO:0043005 "neuron projection"
evidence=IEA;ISO;ISS] [GO:0044295 "axonal growth cone" evidence=IDA]
[GO:0045773 "positive regulation of axon extension"
evidence=IEA;ISO;ISS] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 RGD:62055 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0048471 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270 BRENDA:2.7.11.1
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773 SUPFAM:SSF50156
GO:GO:0044295 GO:GO:0051444 GO:GO:0032233 HOGENOM:HOG000013121
HOVERGEN:HBG052328 OrthoDB:EOG41C6VP EMBL:D31873 IPI:IPI00211975
PIR:I58353 UniGene:Rn.11250 ProteinModelPortal:P53669 STRING:P53669
PhosphoSite:P53669 PRIDE:P53669 UCSC:RGD:62055 InParanoid:P53669
ArrayExpress:P53669 Genevestigator:P53669
GermOnline:ENSRNOG00000001470 Uniprot:P53669
Length = 647
Score = 162 (62.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 25 CASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + + D
Sbjct: 82 E------------SCHGCSEHITKGLVMVGGELKYHPECFICLACGNFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C ++
Sbjct: 130 SKLYCGQCYY 139
Score = 145 (56.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>UNIPROTKB|P53669 [details] [associations]
symbol:Limk1 "LIM domain kinase 1" species:10116 "Rattus
norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00108 PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023
PROSITE:PS50106 SMART:SM00132 SMART:SM00228 RGD:62055 GO:GO:0005524
GO:GO:0005634 GO:GO:0005794 GO:GO:0048471 GO:GO:0046872
eggNOG:COG0515 SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270
BRENDA:2.7.11.1 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0044295 GO:GO:0051444 GO:GO:0032233
HOGENOM:HOG000013121 HOVERGEN:HBG052328 OrthoDB:EOG41C6VP
EMBL:D31873 IPI:IPI00211975 PIR:I58353 UniGene:Rn.11250
ProteinModelPortal:P53669 STRING:P53669 PhosphoSite:P53669
PRIDE:P53669 UCSC:RGD:62055 InParanoid:P53669 ArrayExpress:P53669
Genevestigator:P53669 GermOnline:ENSRNOG00000001470 Uniprot:P53669
Length = 647
Score = 162 (62.1 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 25 CASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKKDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + + D
Sbjct: 82 E------------SCHGCSEHITKGLVMVGGELKYHPECFICLACGNFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C ++
Sbjct: 130 SKLYCGQCYY 139
Score = 145 (56.1 bits), Expect = 4.3e-09, P = 4.3e-09
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCSQSIYDGQYLQALNADWHADCFRCCECSTSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>WB|WBGene00000438 [details] [associations]
symbol:ceh-14 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040040 "thermosensory behavior" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 157 (60.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C+ C+K I D+F+ V R +H+ C+RC C L CF RE ++CR F++ +F
Sbjct: 48 CSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYK---KFG 104
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF--S 119
+ C+ C + I+ D + +H +C +C+ C +L ++ + +
Sbjct: 105 T------------KCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIA 152
Query: 120 REGKLFCRNDF 130
+ +L C++D+
Sbjct: 153 DDARLVCKDDY 163
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 36 HHTLS-DKCFSREGKLFCRNDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNV 94
H+ L+ +C + + + SP S G ++ C+ C+K I D+F+ V
Sbjct: 4 HNILTLGECDELDNHIVMCSTGLLSPQEDFSNVNAGHPNNEEAICSLCDKKIRDRFVSKV 63
Query: 95 LERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
R +H+ C+RC C L CF RE ++CR F+
Sbjct: 64 NGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFY 100
>UNIPROTKB|P20271 [details] [associations]
symbol:ceh-14 "Homeobox protein ceh-14" species:6239
"Caenorhabditis elegans" [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=NAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0016048 "detection of
temperature stimulus" evidence=IMP] Pfam:PF00412 InterPro:IPR001841
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00184
SMART:SM00389 GO:GO:0005634 GO:GO:0030182 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0040040 EMBL:FO081392
GO:GO:0016048 EMBL:AF244368 PIR:S05710 RefSeq:NP_509273.1
UniGene:Cel.18140 ProteinModelPortal:P20271 SMR:P20271
IntAct:P20271 STRING:P20271 PaxDb:P20271 EnsemblMetazoa:F46C8.5
GeneID:181012 KEGG:cel:CELE_F46C8.5 UCSC:F46C8.5 CTD:181012
WormBase:F46C8.5 eggNOG:NOG275246 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 InParanoid:P20271 KO:K09374 OMA:PIESING
NextBio:911980 Uniprot:P20271
Length = 351
Score = 157 (60.3 bits), Expect = 7.0e-11, P = 7.0e-11
Identities = 34/131 (25%), Positives = 65/131 (49%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C+ C+K I D+F+ V R +H+ C+RC C L CF RE ++CR F++ +F
Sbjct: 48 CSLCDKKIRDRFVSKVNGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFYK---KFG 104
Query: 65 SGCGVGLSSSMLISCAGCEKPIL-DKFLLNVLERTWHADCVRCYDCHHTLS--DKCF--S 119
+ C+ C + I+ D + +H +C +C+ C +L ++ + +
Sbjct: 105 T------------KCSSCNEGIVPDHVVRKASNHVYHVECFQCFICKRSLETGEEFYLIA 152
Query: 120 REGKLFCRNDF 130
+ +L C++D+
Sbjct: 153 DDARLVCKDDY 163
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 28/97 (28%), Positives = 46/97 (47%)
Query: 36 HHTLS-DKCFSREGKLFCRNDFFRSPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNV 94
H+ L+ +C + + + SP S G ++ C+ C+K I D+F+ V
Sbjct: 4 HNILTLGECDELDNHIVMCSTGLLSPQEDFSNVNAGHPNNEEAICSLCDKKIRDRFVSKV 63
Query: 95 LERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
R +H+ C+RC C L CF RE ++CR F+
Sbjct: 64 NGRCYHSSCLRCSTCKDELGATCFLREDSMYCRAHFY 100
>UNIPROTKB|I3LHP5 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0032233 "positive regulation of actin
filament bundle assembly" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
GO:GO:0032233 OMA:CFRCCEC EMBL:FP340186 Ensembl:ENSSSCT00000025955
Uniprot:I3LHP5
Length = 638
Score = 161 (61.7 bits), Expect = 8.1e-11, P = 8.1e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 16 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---ARYG 72
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + D
Sbjct: 73 E------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 120
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 121 SKLYCGHCYY 130
Score = 142 (55.0 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 24/62 (38%), Positives = 38/62 (61%)
Query: 70 GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRND 129
G+ S + + CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D
Sbjct: 8 GMGSELPV-CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKD 66
Query: 130 FF 131
++
Sbjct: 67 YW 68
>ZFIN|ZDB-GENE-040718-401 [details] [associations]
symbol:pdlim5a "PDZ and LIM domain 5a" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
ZFIN:ZDB-GENE-040718-401 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 SUPFAM:SSF50156 HOGENOM:HOG000220936
HOVERGEN:HBG051478 EMBL:BC076551 IPI:IPI00508428
RefSeq:NP_001002654.1 UniGene:Dr.106802 ProteinModelPortal:Q6DG04
SMR:Q6DG04 STRING:Q6DG04 GeneID:436927 KEGG:dre:436927 CTD:436927
InParanoid:Q6DG04 NextBio:20831354 Uniprot:Q6DG04
Length = 551
Score = 160 (61.4 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 43/128 (33%), Positives = 61/128 (47%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+C+ C IL + ++N L++TWH C C C + + F E G+ +C DF+
Sbjct: 433 TCSRCHYKILGE-VINALKQTWHVYCFLCASCQQPIRNDTFHLEDGEPYCERDFY----- 486
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
S G G C GC+ PI DKFL L TWH C C C +L + F S
Sbjct: 487 --SLFGTG--------CRGCDFPIEAGDKFL-EALGGTWHDTCFVCTVCSVSLEGQTFFS 535
Query: 120 REGKLFCR 127
++GK C+
Sbjct: 536 KKGKPLCK 543
Score = 135 (52.6 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C+ I FL+ + ++WH + C C +LS+ F E G ++C++
Sbjct: 375 CAHCDMVIRGPFLV-AMGKSWHPEEFTCAHCSVSLSELGFVEEQGSVYCQH--------- 424
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
C +C+ C IL + ++N L++TWH C C C + + F E G
Sbjct: 425 ---C---YEEFFAPTCSRCHYKILGE-VINALKQTWHVYCFLCASCQQPIRNDTFHLEDG 477
Query: 123 KLFCRNDFF 131
+ +C DF+
Sbjct: 478 EPYCERDFY 486
>UNIPROTKB|E1BC64 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051444 "negative regulation of ubiquitin-protein
ligase activity" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0045773 "positive
regulation of axon extension" evidence=IEA] [GO:0043005 "neuron
projection" evidence=IEA] [GO:0032233 "positive regulation of actin
filament bundle assembly" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
KO:K05743 GO:GO:0032233 CTD:3984 OMA:CFRCCEC EMBL:DAAA02058194
IPI:IPI01001191 RefSeq:NP_001193833.1 UniGene:Bt.62771
Ensembl:ENSBTAT00000061497 GeneID:535225 KEGG:bta:535225
NextBio:20876666 Uniprot:E1BC64
Length = 647
Score = 161 (61.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKKDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + D
Sbjct: 82 E------------SCHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 130 SKLYCGHCYY 139
Score = 142 (55.0 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSASLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>MGI|MGI:104572 [details] [associations]
symbol:Limk1 "LIM-domain containing, protein kinase"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0004674 "protein serine/threonine kinase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005925 "focal
adhesion" evidence=IDA] [GO:0006468 "protein phosphorylation"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016301 "kinase activity" evidence=IEA] [GO:0016310
"phosphorylation" evidence=IEA] [GO:0016740 "transferase activity"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0031072 "heat shock
protein binding" evidence=ISO] [GO:0032233 "positive regulation of
actin filament bundle assembly" evidence=ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0044295 "axonal growth cone"
evidence=ISO] [GO:0045773 "positive regulation of axon extension"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0051444 "negative regulation of ubiquitin-protein ligase
activity" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00108
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 MGI:MGI:104572 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 eggNOG:COG0515
SUPFAM:SSF56112 GO:GO:0004674 GO:GO:0008270 GO:GO:0043005
BRENDA:2.7.11.1 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
EMBL:AF139987 KO:K05743 GO:GO:0032233 CTD:3984 HOGENOM:HOG000013121
HOVERGEN:HBG052328 OrthoDB:EOG41C6VP EMBL:X86569 EMBL:U15159
EMBL:AF289665 EMBL:U14166 IPI:IPI00133642 PIR:I48737
RefSeq:NP_034847.1 UniGene:Mm.15409 ProteinModelPortal:P53668
SMR:P53668 MINT:MINT-247675 STRING:P53668 PhosphoSite:P53668
PRIDE:P53668 Ensembl:ENSMUST00000015137 GeneID:16885 KEGG:mmu:16885
UCSC:uc008zwt.1 InParanoid:P53668 OMA:CFRCCEC ChiTaRS:LIMK1
NextBio:290892 Bgee:P53668 CleanEx:MM_LIMK1 Genevestigator:P53668
GermOnline:ENSMUSG00000029674 Uniprot:P53668
Length = 647
Score = 161 (61.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 37/130 (28%), Positives = 59/130 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC RC +C +LS + + ++G+LFC+ D++ R+
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKKDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
SC GC + I ++ E +H +C C C + + D
Sbjct: 82 E------------SCHGCSEHITKGLVMVAGELKYHPECFICLACGNFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C ++
Sbjct: 130 SKLYCGQCYY 139
Score = 141 (54.7 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 25/63 (39%), Positives = 37/63 (58%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC RC +C +LS + + ++G+LFC+
Sbjct: 15 MGEEGSELPVCASCGQRIYDGQYLQALNADWHADCFRCCECSVSLSHQYYEKDGQLFCKK 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>UNIPROTKB|F1MFD1 [details] [associations]
symbol:PXN "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060396 "growth hormone receptor signaling pathway"
evidence=IEA] [GO:0051435 "BH4 domain binding" evidence=IEA]
[GO:0048754 "branching morphogenesis of an epithelial tube"
evidence=IEA] [GO:0048041 "focal adhesion assembly" evidence=IEA]
[GO:0034614 "cellular response to reactive oxygen species"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0007010 GO:GO:0005856 GO:GO:0046872 GO:GO:0018108
GO:GO:0008270 GO:GO:0000187 GO:GO:0006928 GO:GO:0005925
GO:GO:0030027 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0048041 GO:GO:0007229 GO:GO:0034614 GO:GO:0030032
GO:GO:0048754 GO:GO:0060396 EMBL:DAAA02045446 IPI:IPI00694169
Ensembl:ENSBTAT00000024101 OMA:GFMAQGK Uniprot:F1MFD1
Length = 586
Score = 160 (61.4 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 353 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 406
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 407 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 455
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 456 KAYCRKDYF 464
Score = 157 (60.3 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 38/124 (30%), Positives = 57/124 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 412 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 467
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C + F EG
Sbjct: 468 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEG 514
Query: 123 KLFC 126
+ +C
Sbjct: 515 QPYC 518
Score = 118 (46.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 31/128 (24%), Positives = 55/128 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C + F EG+ +C +
Sbjct: 471 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVHGSFFEHEGQPYCEAHYHER---- 525
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 526 --------RGSL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 573
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 574 KPYCQNCF 581
>RGD|1305759 [details] [associations]
symbol:Pxn "paxillin" species:10116 "Rattus norvegicus"
[GO:0000187 "activation of MAPK activity" evidence=IEA;ISO]
[GO:0005178 "integrin binding" evidence=IPI] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA;ISO] [GO:0005925 "focal adhesion" evidence=ISO;IDA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA;ISO] [GO:0007010 "cytoskeleton
organization" evidence=IEA;ISO] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA;ISO] [GO:0008013 "beta-catenin binding"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017166 "vinculin binding" evidence=IEA;ISO] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA;ISO] [GO:0019901
"protein kinase binding" evidence=IPI] [GO:0030027 "lamellipodium"
evidence=IEA;ISO] [GO:0030032 "lamellipodium assembly"
evidence=IEA;ISO] [GO:0031252 "cell leading edge" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0034614
"cellular response to reactive oxygen species" evidence=IEA;ISO]
[GO:0048041 "focal adhesion assembly" evidence=IEA;ISO] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IEA;ISO]
[GO:0051435 "BH4 domain binding" evidence=IEA;ISO] [GO:0060396
"growth hormone receptor signaling pathway" evidence=IEA;ISO]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305759
GO:GO:0005938 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007160 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 KO:K05760 CTD:5829 EMBL:BC081984 IPI:IPI00471807
RefSeq:NP_001012147.1 UniGene:Rn.75 ProteinModelPortal:Q66H76
SMR:Q66H76 DIP:DIP-48423N STRING:Q66H76 PhosphoSite:Q66H76
PRIDE:Q66H76 Ensembl:ENSRNOT00000047466 GeneID:360820
KEGG:rno:360820 ChEMBL:CHEMBL5613 NextBio:674221
ArrayExpress:Q66H76 Genevestigator:Q66H76
GermOnline:ENSRNOG00000001149 Uniprot:Q66H76
Length = 586
Score = 160 (61.4 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 353 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 405
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 406 ------SLFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 455
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 456 KAYCRKDYF 464
Score = 156 (60.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 412 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 467
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 468 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 514
Query: 123 KLFC 126
+ +C
Sbjct: 515 QPYC 518
Score = 114 (45.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 471 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 522
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 523 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 573
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 574 KPYCQSCF 581
>UNIPROTKB|Q66H76 [details] [associations]
symbol:Pxn "Paxillin" species:10116 "Rattus norvegicus"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305759
GO:GO:0005938 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007160 eggNOG:NOG267887 HOGENOM:HOG000018764
HOVERGEN:HBG001512 KO:K05760 CTD:5829 EMBL:BC081984 IPI:IPI00471807
RefSeq:NP_001012147.1 UniGene:Rn.75 ProteinModelPortal:Q66H76
SMR:Q66H76 DIP:DIP-48423N STRING:Q66H76 PhosphoSite:Q66H76
PRIDE:Q66H76 Ensembl:ENSRNOT00000047466 GeneID:360820
KEGG:rno:360820 ChEMBL:CHEMBL5613 NextBio:674221
ArrayExpress:Q66H76 Genevestigator:Q66H76
GermOnline:ENSRNOG00000001149 Uniprot:Q66H76
Length = 586
Score = 160 (61.4 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 353 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 405
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 406 ------SLFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 455
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 456 KAYCRKDYF 464
Score = 156 (60.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 412 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 467
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 468 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 514
Query: 123 KLFC 126
+ +C
Sbjct: 515 QPYC 518
Score = 114 (45.2 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 471 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 522
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 523 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 573
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 574 KPYCQSCF 581
>UNIPROTKB|F5GZ78 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0007160 EMBL:AC004263 HGNC:HGNC:9718 ChiTaRS:PXN
IPI:IPI01015055 ProteinModelPortal:F5GZ78 SMR:F5GZ78 PRIDE:F5GZ78
Ensembl:ENST00000536957 PhylomeDB:F5GZ78 ArrayExpress:F5GZ78
Bgee:F5GZ78 Uniprot:F5GZ78
Length = 589
Score = 160 (61.4 bits), Expect = 9.1e-11, P = 9.1e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 356 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 409
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 410 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 458
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 459 KAYCRKDYF 467
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 415 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 471 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 517
Query: 123 KLFC 126
+ +C
Sbjct: 518 QPYC 521
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 474 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 525
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 526 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 576
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 577 KPYCQNCF 584
>UNIPROTKB|F1PUT6 [details] [associations]
symbol:PXN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060396 "growth hormone receptor signaling
pathway" evidence=IEA] [GO:0051435 "BH4 domain binding"
evidence=IEA] [GO:0048754 "branching morphogenesis of an epithelial
tube" evidence=IEA] [GO:0048041 "focal adhesion assembly"
evidence=IEA] [GO:0034614 "cellular response to reactive oxygen
species" evidence=IEA] [GO:0030032 "lamellipodium assembly"
evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA] [GO:0018108
"peptidyl-tyrosine phosphorylation" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0006928 "cellular component movement" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0007010 GO:GO:0005856 GO:GO:0046872 GO:GO:0018108
GO:GO:0008270 GO:GO:0000187 GO:GO:0006928 GO:GO:0005925
GO:GO:0030027 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0048041 GO:GO:0007229 GO:GO:0034614 GO:GO:0030032
GO:GO:0048754 GO:GO:0060396 EMBL:AAEX03014732 OMA:GFMAQGK
Ensembl:ENSCAFT00000016266 Uniprot:F1PUT6
Length = 590
Score = 160 (61.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 357 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 410
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 411 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 459
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 460 KAYCRKDYF 468
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 416 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 471
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 472 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 518
Query: 123 KLFC 126
+ +C
Sbjct: 519 QPYC 522
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 475 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 526
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 527 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 577
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 578 KPYCQNCF 585
>UNIPROTKB|P49023 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000187
"activation of MAPK activity" evidence=IEA] [GO:0005178 "integrin
binding" evidence=IEA] [GO:0006928 "cellular component movement"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0007229 "integrin-mediated signaling pathway" evidence=IEA]
[GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0019901 "protein kinase binding" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0048041 "focal adhesion
assembly" evidence=IEA] [GO:0048754 "branching morphogenesis of an
epithelial tube" evidence=IEA] [GO:0051435 "BH4 domain binding"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0017166
"vinculin binding" evidence=IPI] [GO:0005886 "plasma membrane"
evidence=IDA;TAS] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005875
"microtubule associated complex" evidence=TAS] [GO:0007155 "cell
adhesion" evidence=NAS] [GO:0007172 "signal complex assembly"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0006936 "muscle contraction" evidence=TAS] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=TAS]
[GO:0034329 "cell junction assembly" evidence=TAS] [GO:0005925
"focal adhesion" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0034614 "cellular response to reactive oxygen
species" evidence=IEP] [GO:0060396 "growth hormone receptor
signaling pathway" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR001904 PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005886 GO:GO:0005938 Reactome:REACT_111102
Reactome:REACT_116125 GO:GO:0007173 GO:GO:0005875
Pathway_Interaction_DB:igf1_pathway GO:GO:0007010 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0007155 GO:GO:0000187
GO:GO:0006928 GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
Pathway_Interaction_DB:arf6cyclingpathway GO:GO:0006936
Reactome:REACT_17044 Reactome:REACT_111155 GO:GO:0034329
GO:GO:0048041 GO:GO:0007229
Pathway_Interaction_DB:lysophospholipid_pathway GO:GO:0034614
Pathway_Interaction_DB:angiopoietinreceptor_pathway GO:GO:0030032
Pathway_Interaction_DB:fcer1pathway
Pathway_Interaction_DB:avb3_integrin_pathway
Pathway_Interaction_DB:met_pathway
Pathway_Interaction_DB:vegfr1_2_pathway
Pathway_Interaction_DB:a4b1_paxdep_pathway
Pathway_Interaction_DB:a4b1_paxindep_pathway GO:GO:0048754
Pathway_Interaction_DB:ret_pathway GO:GO:0007172
Pathway_Interaction_DB:ephbfwdpathway PDB:1OW6 PDB:1OW7 PDB:1OW8
PDBsum:1OW6 PDBsum:1OW7 PDBsum:1OW8 GO:GO:0060396 PDB:1KKY PDB:1KL0
PDBsum:1KKY PDBsum:1KL0 PDB:3GM1 PDB:3U3C PDB:3U3F PDBsum:3GM1
PDBsum:3U3C PDBsum:3U3F eggNOG:NOG267887 HOVERGEN:HBG001512
PDB:3PY7 PDBsum:3PY7 EMBL:AC004263 PDB:2K2R PDB:2VZD PDB:2VZG
PDB:2VZI PDBsum:2K2R PDBsum:2VZD PDBsum:2VZG PDBsum:2VZI PDB:4EDN
PDBsum:4EDN KO:K05760 CTD:5829 EMBL:U14588 EMBL:U87946 EMBL:U87941
EMBL:U87942 EMBL:U87943 EMBL:U87944 EMBL:U87945 EMBL:D86862
EMBL:D86863 EMBL:AK314204 EMBL:BX648777 EMBL:BC136787 EMBL:BC136794
EMBL:BC144410 IPI:IPI00220030 IPI:IPI00220031 IPI:IPI00335634
IPI:IPI00890738 PIR:A55933 RefSeq:NP_001074324.1
RefSeq:NP_001230685.1 RefSeq:NP_002850.2 RefSeq:NP_079433.3
UniGene:Hs.446336 PDB:2O9V PDB:3RQE PDB:3RQF PDB:3RQG PDBsum:2O9V
PDBsum:3RQE PDBsum:3RQF PDBsum:3RQG ProteinModelPortal:P49023
SMR:P49023 DIP:DIP-33851N IntAct:P49023 MINT:MINT-92615
STRING:P49023 PhosphoSite:P49023 DMDM:27735219 PaxDb:P49023
PRIDE:P49023 Ensembl:ENST00000228307 Ensembl:ENST00000267257
Ensembl:ENST00000424649 Ensembl:ENST00000458477 GeneID:5829
KEGG:hsa:5829 UCSC:uc001txt.3 UCSC:uc001txv.3 UCSC:uc001txx.3
UCSC:uc001txy.3 GeneCards:GC12M120648 HGNC:HGNC:9718 HPA:CAB003841
MIM:602505 neXtProt:NX_P49023 PharmGKB:PA34062 ChEMBL:CHEMBL5715
ChiTaRS:PXN EvolutionaryTrace:P49023 GenomeRNAi:5829 NextBio:22710
PMAP-CutDB:P49023 ArrayExpress:P49023 Bgee:P49023 CleanEx:HS_PXN
Genevestigator:P49023 GermOnline:ENSG00000089159 Uniprot:P49023
Length = 591
Score = 160 (61.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 411
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 412 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 473 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 476 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 527
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 528 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 578
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 579 KPYCQNCF 586
>MGI|MGI:108295 [details] [associations]
symbol:Pxn "paxillin" species:10090 "Mus musculus"
[GO:0000187 "activation of MAPK activity" evidence=IDA] [GO:0005178
"integrin binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO;IDA;TAS]
[GO:0006928 "cellular component movement" evidence=IMP] [GO:0007010
"cytoskeleton organization" evidence=IMP] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0007160 "cell-matrix adhesion"
evidence=IEA] [GO:0007229 "integrin-mediated signaling pathway"
evidence=IMP;TAS] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017166 "vinculin
binding" evidence=ISO] [GO:0018108 "peptidyl-tyrosine
phosphorylation" evidence=IDA] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO;IDA]
[GO:0030032 "lamellipodium assembly" evidence=IDA] [GO:0030054
"cell junction" evidence=IEA] [GO:0030159 "receptor signaling
complex scaffold activity" evidence=TAS] [GO:0031252 "cell leading
edge" evidence=IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IDA] [GO:0048754
"branching morphogenesis of an epithelial tube" evidence=IDA]
[GO:0051435 "BH4 domain binding" evidence=IPI] [GO:0060396 "growth
hormone receptor signaling pathway" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:108295
GO:GO:0005938 GO:GO:0007010 GO:GO:0005856 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0000187 GO:GO:0006928
GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0048041 GO:GO:0007229
GO:GO:0030032 GO:GO:0030159 GO:GO:0048754 eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OrthoDB:EOG4TMR25 KO:K05760
CTD:5829 ChiTaRS:PXN EMBL:AF293883 EMBL:AF293882 EMBL:AK149933
EMBL:AK157688 EMBL:AK167299 EMBL:AK171436 IPI:IPI00128703
IPI:IPI00165881 RefSeq:NP_035353.1 RefSeq:NP_598676.2
UniGene:Mm.18714 ProteinModelPortal:Q8VI36 SMR:Q8VI36 IntAct:Q8VI36
MINT:MINT-141924 STRING:Q8VI36 PhosphoSite:Q8VI36 PaxDb:Q8VI36
PRIDE:Q8VI36 DNASU:19303 Ensembl:ENSMUST00000067268 GeneID:19303
KEGG:mmu:19303 UCSC:uc008zea.1 UCSC:uc008zeb.1 InParanoid:Q8VI36
NextBio:296261 PMAP-CutDB:Q8VI36 Bgee:Q8VI36 CleanEx:MM_PXN
Genevestigator:Q8VI36 GermOnline:ENSMUSG00000029528 Uniprot:Q8VI36
Length = 591
Score = 160 (61.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 410
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 411 ------SLFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 473 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
Score = 114 (45.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 476 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 527
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 528 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 578
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 579 KPYCQSCF 586
>UNIPROTKB|F1M1Z5 [details] [associations]
symbol:Pxn "Paxillin" species:10116 "Rattus norvegicus"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0007160 "cell-matrix
adhesion" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904
PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1305759 GO:GO:0005886 GO:GO:0007010 GO:GO:0005856 GO:GO:0046872
GO:GO:0018108 GO:GO:0008270 GO:GO:0000187 GO:GO:0006928
GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10 GO:GO:0048041
GO:GO:0007229 GO:GO:0034614 GO:GO:0030032 GO:GO:0048754
GO:GO:0060396 IPI:IPI00363651 Ensembl:ENSRNOT00000001520
ArrayExpress:F1M1Z5 Uniprot:F1M1Z5
Length = 591
Score = 160 (61.4 bits), Expect = 9.2e-11, P = 9.2e-11
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 358 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYH------ 410
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 411 ------SLFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDG 460
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 461 KAYCRKDYF 469
Score = 156 (60.0 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 417 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGAFFGPEGFHEKDGKAYCRKDYFDM---F 472
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 473 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDG 519
Query: 123 KLFC 126
+ +C
Sbjct: 520 QPYC 523
Score = 114 (45.2 bits), Expect = 8.0e-06, P = 8.0e-06
Identities = 31/128 (24%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 476 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFVNGSFFEHDGQPYCE-------VHY 527
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 528 HERRG-----SL---CSGCQKPITGR-CITAMAKKFHPEHFVCAFCLKQLNKGTFKEQND 578
Query: 123 KLFCRNDF 130
K +C++ F
Sbjct: 579 KPYCQSCF 586
>UNIPROTKB|J9NU69 [details] [associations]
symbol:LMX1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 OMA:NRMEGMM EMBL:AAEX03006872
EMBL:AAEX03006873 Ensembl:ENSCAFT00000044276 Uniprot:J9NU69
Length = 327
Score = 155 (59.6 bits), Expect = 9.6e-11, P = 9.6e-11
Identities = 33/116 (28%), Positives = 54/116 (46%)
Query: 18 LNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFPSGCGVGLSSSMLI 77
+ V E +WH +C++C C L+ C+ R+ KL+C+ D+
Sbjct: 1 MRVNESSWHEECLQCAACQQALTTSCYFRDRKLYCKQDY---------------QQLFAA 45
Query: 78 SCAGC-EKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDKCFSREGKLFCRNDF 130
C+GC EK +F++ LE +H C C C L D+ +EG+L C+ D+
Sbjct: 46 KCSGCMEKIAPTEFVMRALECVYHLGCFCCCVCERQLRKGDEFVLKEGQLLCKGDY 101
>UNIPROTKB|F1NB68 [details] [associations]
symbol:PXN "Paxillin" species:9031 "Gallus gallus"
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0000187 "activation of MAPK activity"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0006928 "cellular
component movement" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0007229 "integrin-mediated
signaling pathway" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0017166 "vinculin binding" evidence=IEA]
[GO:0018108 "peptidyl-tyrosine phosphorylation" evidence=IEA]
[GO:0030027 "lamellipodium" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0034614 "cellular
response to reactive oxygen species" evidence=IEA] [GO:0048041
"focal adhesion assembly" evidence=IEA] [GO:0048754 "branching
morphogenesis of an epithelial tube" evidence=IEA] [GO:0051435 "BH4
domain binding" evidence=IEA] [GO:0060396 "growth hormone receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR001904 PRINTS:PR00832 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005886 GO:GO:0007010 GO:GO:0005856
GO:GO:0046872 GO:GO:0018108 GO:GO:0008270 GO:GO:0000187
GO:GO:0006928 GO:GO:0005925 GO:GO:0030027 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0048041 GO:GO:0007229
GO:GO:0034614 GO:GO:0030032 GO:GO:0060396 IPI:IPI00585869
OMA:GFMAQGK EMBL:AADN02043198 Ensembl:ENSGALT00000011727
Uniprot:F1NB68
Length = 559
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 326 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 379
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 380 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDG 428
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 429 KAYCRKDYF 437
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 385 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDGKAYCRKDYFDM---F 440
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 441 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDG 487
Query: 123 KLFC 126
+ +C
Sbjct: 488 QPYC 491
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 444 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCE-------VHY 495
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 496 HERRG-----SL---CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 546
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 547 KPYCQNCF 554
>UNIPROTKB|P49024 [details] [associations]
symbol:PXN "Paxillin" species:9031 "Gallus gallus"
[GO:0007160 "cell-matrix adhesion" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR001904 PRINTS:PR00832
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0007160 PDB:2L6F PDB:2L6G PDB:2L6H
PDBsum:2L6F PDBsum:2L6G PDBsum:2L6H eggNOG:NOG267887
HOGENOM:HOG000018764 HOVERGEN:HBG001512 OrthoDB:EOG4TMR25 KO:K05760
EMBL:U14589 EMBL:L30099 IPI:IPI00585869 PIR:B55933
RefSeq:NP_990315.1 UniGene:Gga.4056 ProteinModelPortal:P49024
SMR:P49024 IntAct:P49024 STRING:P49024 GeneID:395832
KEGG:gga:395832 CTD:5829 InParanoid:P49024 NextBio:20815900
Uniprot:P49024
Length = 559
Score = 159 (61.0 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 38/129 (29%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVRF 63
C C+KPI + ++ + +TWH + C C + + F R+G+ +C D+
Sbjct: 326 CGACKKPIAGQ-VVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDYHN----- 379
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREG 122
L S C C PILDK ++ L+RTWH + C C + F ++G
Sbjct: 380 -------LFSPR---CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDG 428
Query: 123 KLFCRNDFF 131
K +CR D+F
Sbjct: 429 KAYCRKDYF 437
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 37/124 (29%), Positives = 58/124 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
C C PILDK ++ L+RTWH + C C + F ++GK +CR D+F F
Sbjct: 385 CYYCNGPILDK-VVTALDRTWHPEHFFCAQCGVFFGPEGFHEKDGKAYCRKDYFDM---F 440
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREG 122
CG GC + IL+ ++ + L WH +C C +C ++ F +G
Sbjct: 441 APKCG------------GCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDG 487
Query: 123 KLFC 126
+ +C
Sbjct: 488 QPYC 491
Score = 119 (46.9 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 32/128 (25%), Positives = 58/128 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHT-LSDKCFSREGKLFCRNDFFRSPVRF 63
C GC + IL+ ++ + L WH +C C +C ++ F +G+ +C V +
Sbjct: 444 CGGCARAILENYI-SALNTLWHPECFVCRECFTPFINGSFFEHDGQPYCE-------VHY 495
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG- 122
G S+ C+GC+KPI + + + + +H + C C L+ F +
Sbjct: 496 HERRG-----SL---CSGCQKPITGR-CITAMGKKFHPEHFVCAFCLKQLNKGTFKEQND 546
Query: 123 KLFCRNDF 130
K +C+N F
Sbjct: 547 KPYCQNCF 554
>FB|FBgn0003896 [details] [associations]
symbol:tup "tailup" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI] [GO:0007362
"terminal region determination" evidence=IGI] [GO:0007390
"germ-band shortening" evidence=IMP] [GO:0008258 "head involution"
evidence=NAS] [GO:0046665 "amnioserosa maintenance" evidence=IMP]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IMP] [GO:0000977
"RNA polymerase II regulatory region sequence-specific DNA binding"
evidence=IDA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IPI] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0008407 "chaeta morphogenesis"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0070983 "dendrite
guidance" evidence=IMP] [GO:0035310 "notum cell fate specification"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007507 "heart
development" evidence=IMP] [GO:0000980 "RNA polymerase II distal
enhancer sequence-specific DNA binding" evidence=IDA] [GO:0048542
"lymph gland development" evidence=IMP] [GO:0003705 "RNA polymerase
II distal enhancer sequence-specific DNA binding transcription
factor activity" evidence=IDA] [GO:0022416 "chaeta development"
evidence=IMP] [GO:0007521 "muscle cell fate determination"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0007507 GO:GO:0046872
GO:GO:0007391 GO:GO:0008293 GO:GO:0008270 GO:GO:0045944
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0003705 GO:GO:0000980
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0043433 GO:GO:0048542
GO:GO:0035310 GO:GO:0008407 eggNOG:NOG264882 GO:GO:0007362
GO:GO:0070983 GO:GO:0008258 GO:GO:0007390 GO:GO:0007521 HSSP:P50480
GO:GO:0046665 EMBL:U89385 ProteinModelPortal:P92031 SMR:P92031
STRING:P92031 PRIDE:P92031 FlyBase:FBgn0003896 InParanoid:P92031
OrthoDB:EOG45DV52 ArrayExpress:P92031 Bgee:P92031 Uniprot:P92031
Length = 534
Score = 158 (60.7 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 39/134 (29%), Positives = 62/134 (46%)
Query: 2 LISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFR 58
L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+ D+ R
Sbjct: 51 LSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCKRDYVR 110
Query: 59 SPVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTL--SDK 116
F + C C + F++ + +H +C RC C L D+
Sbjct: 111 L---FGTKCD---------KCGNSFSK--NDFVMRAKTKIFHIECFRCSACARQLLPGDE 156
Query: 117 CFSRE-GKLFCRND 129
R+ G L+C+ D
Sbjct: 157 FALRDAGALYCKED 170
Score = 129 (50.5 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 22/63 (34%), Positives = 35/63 (55%)
Query: 71 LSSSMLISCAGCEKPILDKFLLNVL-ERTWHADCVRCYDCHHTLSDKC--FSREGKLFCR 127
+ L C GC I D+++L V + WHA C++C +C L + C F R+GK +C+
Sbjct: 46 IKKQRLSHCVGCGGQIHDQYILRVAPDLEWHAACLKCQECRQFLDESCTCFVRDGKTYCK 105
Query: 128 NDF 130
D+
Sbjct: 106 RDY 108
>UNIPROTKB|Q6Q6R5 [details] [associations]
symbol:CRIP3 "Cysteine-rich protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0042098
"T cell proliferation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0042098 eggNOG:NOG246818
HOVERGEN:HBG051143 HOGENOM:HOG000111234 EMBL:AY555741 EMBL:AY555742
EMBL:AY555743 EMBL:AY555744 EMBL:AL583834 IPI:IPI00410146
IPI:IPI00645306 IPI:IPI00735865 IPI:IPI00738893 RefSeq:NP_996805.2
UniGene:Hs.653165 ProteinModelPortal:Q6Q6R5 SMR:Q6Q6R5
STRING:Q6Q6R5 PhosphoSite:Q6Q6R5 DMDM:92087061 PRIDE:Q6Q6R5
DNASU:401262 Ensembl:ENST00000274990 Ensembl:ENST00000372569
GeneID:401262 KEGG:hsa:401262 UCSC:uc003ouu.1 UCSC:uc010jyn.2
CTD:401262 GeneCards:GC06M043267 HGNC:HGNC:17751 HPA:HPA036198
neXtProt:NX_Q6Q6R5 PharmGKB:PA134929489 InParanoid:Q6Q6R5
OMA:CEHCHSV PhylomeDB:Q6Q6R5 GenomeRNAi:401262 NextBio:106676
ArrayExpress:Q6Q6R5 Bgee:Q6Q6R5 CleanEx:HS_CRIP3
Genevestigator:Q6Q6R5 GermOnline:ENSG00000146215 Uniprot:Q6Q6R5
Length = 217
Score = 92 (37.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 22/88 (25%), Positives = 40/88 (45%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+C C++P+ ++ L + WH C++C CH LS + G+ +C + + +
Sbjct: 4 TCPRCQQPVFFAEKVSSLGKNWHRFCLKCERCHSILSPGGHAEHNGRPYCHKPCYGA-LF 62
Query: 63 FPSGCGVGLSSSMLIS----CAGCEKPI 86
P G +G S L + GC P+
Sbjct: 63 GPRGVNIGGVGSYLYNPPTPSPGCTTPL 90
Score = 91 (37.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFC 126
C GC +P+ + L R WH C+RC CH TL+ + +G +C
Sbjct: 124 CPGCGEPVYFAEKVMSLGRNWHRPCLRCQRCHKTLTAGSHAEHDGVPYC 172
>ZFIN|ZDB-GENE-081105-159 [details] [associations]
symbol:si:rp71-15d4.1 "si:rp71-15d4.1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-081105-159 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 EMBL:BX901930
IPI:IPI00890407 Ensembl:ENSDART00000139647 Uniprot:F1QK19
Length = 416
Score = 155 (59.6 bits), Expect = 1.7e-10, P = 1.7e-10
Identities = 37/124 (29%), Positives = 57/124 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C+ PI +L +++TWH + C C + + R+GK +C DF+
Sbjct: 242 CAYCKGPITQN-ILTAMDQTWHPEHFFCCHCGDLFGPEGYLERDGKPYCSRDFY------ 294
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EG 122
C L + C+GC +P+ + +L + TWH DC C DC +D CF G
Sbjct: 295 ---C---LFAP---KCSGCGEPVKENYL-SAANGTWHPDCFVCSDCLKPFTDGCFLELNG 344
Query: 123 KLFC 126
+ C
Sbjct: 345 RPLC 348
Score = 137 (53.3 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 38/130 (29%), Positives = 57/130 (43%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKC--FSREGKLFCRNDFFRSPVR 62
CA C K I K ++ L + WH + C C L C F R+GK +C D+ +
Sbjct: 183 CASCGKCIAGK-MITALGQVWHPEHFVCSACREELGT-CGFFERDGKPYCEKDYQK---- 236
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SRE 121
L S CA C+ PI +L +++TWH + C C + + R+
Sbjct: 237 --------LFSPR---CAYCKGPITQN-ILTAMDQTWHPEHFFCCHCGDLFGPEGYLERD 284
Query: 122 GKLFCRNDFF 131
GK +C DF+
Sbjct: 285 GKPYCSRDFY 294
Score = 130 (50.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 36/124 (29%), Positives = 53/124 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRSPVRF 63
C+GC +P+ + +L + TWH DC C DC +D CF G+ C + +
Sbjct: 301 CSGCGEPVKENYL-SAANGTWHPDCFVCSDCLKPFTDGCFLELNGRPLCS-------LHY 352
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
S G C C KPI + + L+R +H + C C LS F + G
Sbjct: 353 HSRQGT--------LCGTCGKPIAGRCIA-ALDRKFHPEHFVCAFCLRQLSQGVFKEQAG 403
Query: 123 KLFC 126
K +C
Sbjct: 404 KPYC 407
>UNIPROTKB|E1BFL4 [details] [associations]
symbol:CRIP3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042098 "T cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0042098
GeneTree:ENSGT00550000074548 CTD:401262 OMA:CEHCHSV
EMBL:DAAA02055095 IPI:IPI00695050 RefSeq:NP_001179618.1
UniGene:Bt.2282 Ensembl:ENSBTAT00000035993 GeneID:530071
KEGG:bta:530071 NextBio:20875173 Uniprot:E1BFL4
Length = 204
Score = 93 (37.8 bits), Expect = 0.00095, P = 0.00095
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRSPVRF 63
C GCE+P+ + L R WH C+RC C TL+ + +G +C + +
Sbjct: 124 CPGCEEPVYFAETVMSLGRNWHRPCLRCQRCRKTLTAGSHAEHDGAPYCHIPCY-GYLFG 182
Query: 64 PSGCGVG 70
P G +G
Sbjct: 183 PKGVNIG 189
Score = 92 (37.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFC 126
C GCE+P+ + L R WH C+RC C TL+ + +G +C
Sbjct: 124 CPGCEEPVYFAETVMSLGRNWHRPCLRCQRCRKTLTAGSHAEHDGAPYC 172
Score = 89 (36.4 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 19/74 (25%), Positives = 35/74 (47%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVR 62
+C C++P+ ++ L + WH C++C CH LS + G+ +C + + +
Sbjct: 4 TCPRCQQPVFFAEKVSSLGKNWHPFCLKCEHCHSVLSPGGHAEHNGRPYCHKPCYGA-LF 62
Query: 63 FPSGCGVGLSSSML 76
P G +G S L
Sbjct: 63 GPRGVNIGGVGSYL 76
>UNIPROTKB|E2R5M1 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:54751 OMA:NRLFCKP
EMBL:AAEX03001865 EMBL:AAEX03001866 RefSeq:XP_865087.1
Ensembl:ENSCAFT00000025606 GeneID:608618 KEGG:cfa:608618
Uniprot:E2R5M1
Length = 372
Score = 153 (58.9 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 38/138 (27%), Positives = 65/138 (47%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGK--LFCRNDFFRS 59
L C C+K ++ + ++ L R +H C C C + D+ F+ + + ++C +DF+R
Sbjct: 239 LEKCGKCDK-VVQEHIIRALGRAFHPTCFTCVTCARCIGDESFALDSQDEVYCLDDFYR- 296
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPIL-----DKFLLNVLERTWHADCVRCYDCHHTLS 114
+F C + CE PI+ D F + + R +H +C RC DC LS
Sbjct: 297 --KFAPVCSI------------CENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRILLS 342
Query: 115 ----DK-CFSREGKLFCR 127
D+ C+ +LFC+
Sbjct: 343 VEPTDQGCYPLNNRLFCK 360
Score = 124 (48.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 30/131 (22%), Positives = 57/131 (43%)
Query: 5 CAGCEKPILDKFL-LNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
C C K + + L + ++R +HA C C C L+ + F ++G+ C
Sbjct: 182 CGFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCE--------- 232
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREG 122
C L C C+K ++ + ++ L R +H C C C + D+ F+ +
Sbjct: 233 ---AC----YQDTLEKCGKCDK-VVQEHIIRALGRAFHPTCFTCVTCARCIGDESFALDS 284
Query: 123 K--LFCRNDFF 131
+ ++C +DF+
Sbjct: 285 QDEVYCLDDFY 295
>ZFIN|ZDB-GENE-041014-332 [details] [associations]
symbol:lmx1a "LIM homeobox transcription factor 1,
alpha" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-041014-332 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
HOGENOM:HOG000231629 CTD:4009 HOVERGEN:HBG052335 EMBL:BX296562
IPI:IPI00496510 RefSeq:NP_001020669.1 UniGene:Dr.108111
Ensembl:ENSDART00000019059 GeneID:558036 KEGG:dre:558036
eggNOG:NOG302270 InParanoid:Q5RI65 OMA:RLYSMQD OrthoDB:EOG4P8FJW
NextBio:20882278 Uniprot:Q5RI65
Length = 366
Score = 152 (58.6 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/128 (31%), Positives = 52/128 (40%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C GC + I D++LL V + WH C+ C C L D CF R L+C+ D+ + V
Sbjct: 26 CEGCNELIRDRYLLRVQDGLWHERCLHCASCREPLKDTCFLRNKTLYCKRDYQKLFVVRC 85
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREG 122
GC +S S L+ A +H C C C L D C R
Sbjct: 86 QGCSEIISPSELVMRAQGSA-------------VFHLRCFCCCVCGCRLQKGDHCVLRGD 132
Query: 123 KLFCRNDF 130
LFC F
Sbjct: 133 GLFCATHF 140
>UNIPROTKB|F5GYZ6 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01010126
ProteinModelPortal:F5GYZ6 SMR:F5GYZ6 Ensembl:ENST00000546279
ArrayExpress:F5GYZ6 Bgee:F5GYZ6 Uniprot:F5GYZ6
Length = 110
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCH 110
G++ + CA C K I + ++ + +H DC C C+
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCN 109
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDY 67
>UNIPROTKB|F5H3S4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01011541 SMR:F5H3S4
Ensembl:ENST00000537757 Ensembl:ENST00000539534
Ensembl:ENST00000546281 Uniprot:F5H3S4
Length = 118
Score = 145 (56.1 bits), Expect = 3.2e-10, P = 3.2e-10
Identities = 31/110 (28%), Positives = 53/110 (48%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDFFRSPV 61
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+ R
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL-- 70
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCH 110
G++ + CA C K I + ++ + +H DC C C+
Sbjct: 71 -------FGVTGN----CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCN 109
Score = 119 (46.9 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 19/55 (34%), Positives = 32/55 (58%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD---KCFSREGKLFCRNDF 130
CAGC + I D++LL L++ WH DC++C C L + +++ + CR D+
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDY 67
>UNIPROTKB|E1C2D6 [details] [associations]
symbol:E1C2D6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001558
"regulation of cell growth" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021542 "dentate gyrus development"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0021953 "central nervous system neuron differentiation"
evidence=IEA] [GO:0030901 "midbrain development" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001558 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
EMBL:AADN02034025 EMBL:AADN02034026 EMBL:AADN02034027
EMBL:AADN02034028 EMBL:AADN02034029 IPI:IPI00590021
Ensembl:ENSGALT00000005411 OMA:XKSDDEE Uniprot:E1C2D6
Length = 386
Score = 151 (58.2 bits), Expect = 4.0e-10, P = 4.0e-10
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRF- 63
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+ + + F
Sbjct: 35 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDYEKYVLNFF 94
Query: 64 --PSGC 67
P GC
Sbjct: 95 KKPGGC 100
Score = 140 (54.3 bits), Expect = 6.3e-09, P = 6.3e-09
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDF 130
C GC++ I D+FLL + + WH CV+C C L CF R+ KL+C+ D+
Sbjct: 35 CEGCQRVIADRFLLRLNDSLWHERCVQCTSCKEPLHTTCFYRDKKLYCKLDY 86
>ZFIN|ZDB-GENE-061212-3 [details] [associations]
symbol:limk1a "LIM domain kinase 1a" species:7955
"Danio rerio" [GO:0004672 "protein kinase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0016772 "transferase activity, transferring
phosphorus-containing groups" evidence=IEA] [GO:0016301 "kinase
activity" evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
Pfam:PF00412 InterPro:IPR000719 InterPro:IPR001245
InterPro:IPR001478 InterPro:IPR001781 InterPro:IPR011009
InterPro:IPR017441 Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107
PROSITE:PS00478 PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 ZFIN:ZDB-GENE-061212-3 GO:GO:0005524
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0004672
Gene3D:2.10.110.10 SUPFAM:SSF50156 KO:K05743 HOVERGEN:HBG052328
EMBL:DQ679229 IPI:IPI00782816 RefSeq:NP_001036156.1
UniGene:Dr.103272 ProteinModelPortal:Q0PWB7 STRING:Q0PWB7
GeneID:735292 KEGG:dre:735292 CTD:735292 InParanoid:Q0PWB7
NextBio:20902662 Uniprot:Q0PWB7
Length = 648
Score = 153 (58.9 bits), Expect = 6.0e-10, P = 6.0e-10
Identities = 32/111 (28%), Positives = 51/111 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
C+GC + I D L L WH C RC +C +LS + ++G+LFC+ D++ +F
Sbjct: 27 CSGCGQQIYDDQYLQALSSDWHTLCCRCCECGSSLSHWYYEKDGRLFCKKDYW---AKFG 83
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSD 115
C GC +PI ++ E+ +H +C C C + D
Sbjct: 84 E------------LCHGCSEPISTGLIMVAGEQKYHPECFSCLSCGAFIGD 122
Score = 125 (49.1 bits), Expect = 6.0e-07, P = 6.0e-07
Identities = 20/53 (37%), Positives = 31/53 (58%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFF 131
C+GC + I D L L WH C RC +C +LS + ++G+LFC+ D++
Sbjct: 27 CSGCGQQIYDDQYLQALSSDWHTLCCRCCECGSSLSHWYYEKDGRLFCKKDYW 79
>ZFIN|ZDB-GENE-040426-908 [details] [associations]
symbol:pdlim5b "PDZ and LIM domain 5b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00595
Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
ZFIN:ZDB-GENE-040426-908 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 SUPFAM:SSF50156 HOGENOM:HOG000220936
HOVERGEN:HBG051478 HSSP:P48059 OrthoDB:EOG4FTW06 EMBL:BC045922
IPI:IPI00509756 RefSeq:NP_956490.1 UniGene:Dr.745
ProteinModelPortal:Q7ZVC1 SMR:Q7ZVC1 PRIDE:Q7ZVC1 GeneID:393165
KEGG:dre:393165 CTD:393165 InParanoid:Q7ZVC1 NextBio:20814235
ArrayExpress:Q7ZVC1 Bgee:Q7ZVC1 Uniprot:Q7ZVC1
Length = 628
Score = 151 (58.2 bits), Expect = 9.3e-10, P = 9.3e-10
Identities = 40/128 (31%), Positives = 60/128 (46%)
Query: 4 SCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKL-FCRNDFFRSPVR 62
+C C K I+ + ++N L++TWH +C C C + + F E + +C D++
Sbjct: 510 TCFQCHKKIIGE-VINALKQTWHVNCFLCASCKQPIGNNTFHLEDRQPYCEKDYY----- 563
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-S 119
S G G C GC+ PI DKFL L TWH C C C +L + F S
Sbjct: 564 --SLFGTG--------CHGCDFPIEAGDKFL-EALGFTWHDTCFVCAVCSTSLEGQTFFS 612
Query: 120 REGKLFCR 127
++ K C+
Sbjct: 613 KKDKPLCK 620
Score = 135 (52.6 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I FL+ + ++WH D C C +L+D F E G ++C V
Sbjct: 452 CAHCNTVIRGPFLV-AMGKSWHKDEFTCSHCRSSLADVGFVEERGSVYC--------VL- 501
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGK 123
C + +C C K I+ + ++N L++TWH +C C C + + F E +
Sbjct: 502 ---C---YEEFLAPTCFQCHKKIIGE-VINALKQTWHVNCFLCASCKQPIGNNTFHLEDR 554
Query: 124 L-FCRNDFF 131
+C D++
Sbjct: 555 QPYCEKDYY 563
>UNIPROTKB|F1RRL8 [details] [associations]
symbol:CRIP3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042098 "T cell proliferation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0042098
GeneTree:ENSGT00550000074548 OMA:CEHCHSV EMBL:CR974479
Ensembl:ENSSSCT00000001865 Uniprot:F1RRL8
Length = 204
Score = 90 (36.7 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFC 126
C GCE+P+ + L R WH C+RC C TL+ + +G +C
Sbjct: 121 CPGCEEPVYFAEKVMSLGRNWHRPCLRCQRCRKTLTAGSHAEHDGVPYC 169
Score = 86 (35.3 bits), Expect = 1.5e-09, Sum P(2) = 1.5e-09
Identities = 21/74 (28%), Positives = 34/74 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C +P+ ++ L + WH C++C CH+ LS + G+ +C + V F
Sbjct: 5 CPRCLQPVFFAEKVSSLGKNWHRFCLKCEHCHNVLSPGGHAEHNGRPYCHKPCYG--VLF 62
Query: 64 -PSGCGVGLSSSML 76
P G +G S L
Sbjct: 63 GPRGVNIGGVGSYL 76
>ZFIN|ZDB-GENE-061013-662 [details] [associations]
symbol:zgc:154176 "zgc:154176" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-061013-662
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:BC124831
IPI:IPI00800995 RefSeq:NP_001070771.1 UniGene:Dr.104520
ProteinModelPortal:Q08B86 GeneID:768160 KEGG:dre:768160
HOVERGEN:HBG106905 InParanoid:Q08B86 NextBio:20918477
ArrayExpress:Q08B86 Uniprot:Q08B86
Length = 292
Score = 143 (55.4 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 39/131 (29%), Positives = 62/131 (47%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRSPVR 62
C C I D ++ LER +H C C C + ++ F++ G+++C D++R +
Sbjct: 165 CWACGDVIKDH-VIRALERAYHPPCFVCTTCRQPIGEQRFAQGEVGEVYCLQDYYR---K 220
Query: 63 FPSGCGV-GLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK----- 116
+ CGV GL M+I D F + L R++H DC RC C LS +
Sbjct: 221 YAPQCGVCGL---MIIP----RDDGTDSFTVECLGRSYHEDCYRCQVCAVLLSPEPDERG 273
Query: 117 CFSREGKLFCR 127
C +G++ CR
Sbjct: 274 CHPLDGQMLCR 284
Score = 102 (41.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 31/131 (23%), Positives = 54/131 (41%)
Query: 5 CAGCEKPILD-KFLLNVLERTWHADCVRCYDCHHTLSDK-CFSREGKLFCRNDFFRSPVR 62
C C K + + + L R +H+ C +C C L+ + +SR G C
Sbjct: 105 CGFCRKQVSPCESAIVALNRCYHSGCFQCRQCCAPLAGRQYYSRSGLPLCE--------- 155
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE- 121
C + L C C I D ++ LER +H C C C + ++ F++
Sbjct: 156 ---AC----HQASLEPCWACGDVIKDH-VIRALERAYHPPCFVCTTCRQPIGEQRFAQGE 207
Query: 122 -GKLFCRNDFF 131
G+++C D++
Sbjct: 208 VGEVYCLQDYY 218
>FB|FBgn0085354 [details] [associations]
symbol:CG34325 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 EMBL:BT132655 RefSeq:NP_001097003.1
UniGene:Dm.19724 SMR:Q9VXC1 MINT:MINT-1003243
EnsemblMetazoa:FBtr0112527 GeneID:32656 KEGG:dme:Dmel_CG34325
UCSC:CG34325-RA FlyBase:FBgn0085354 eggNOG:NOG302338
InParanoid:Q9VXC1 OMA:PEHFACK OrthoDB:EOG4JDFPW ChiTaRS:CG34325
GenomeRNAi:32656 NextBio:779690 Uniprot:Q9VXC1
Length = 179
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 32/116 (27%), Positives = 52/116 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
C GC++PIL++ + + TWH +C C C L+ F +G +CR DF
Sbjct: 67 CHGCKRPILER-TIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFEHM--- 122
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF 118
F + CG C+ PI + ++ L+ WH +C +C C ++ F
Sbjct: 123 FAARCG------------NCKAPITENAIV-ALDAKWHRECFKCKKCKTPITASSF 165
Score = 137 (53.3 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 35/129 (27%), Positives = 59/129 (45%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS-REGKLFCRNDFFRSPVRF 63
C C + ++ ++ L +TWH + C DC +++ F+ +G+ C
Sbjct: 8 CHKCNE-VIQLRIITALGKTWHPEHFVCKDCQCPITEASFNINDGQPVC----------- 55
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYD-CHHTLSDKCF-SRE 121
S C V S + C GC++PIL++ + + TWH +C C C L+ F +
Sbjct: 56 -SACFVSNYSGI---CHGCKRPILER-TIKAMGETWHEECFLCRGPCMQQLAGSSFYEHD 110
Query: 122 GKLFCRNDF 130
G +CR DF
Sbjct: 111 GLPYCRTDF 119
>UNIPROTKB|F1LMU8 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain protein 5" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 RGD:621076 GO:GO:0030018 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156
GeneTree:ENSGT00700000104411 IPI:IPI00210187 PRIDE:F1LMU8
Ensembl:ENSRNOT00000022387 ArrayExpress:F1LMU8 Uniprot:F1LMU8
Length = 559
Score = 146 (56.5 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 39/127 (30%), Positives = 59/127 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C++ IL + ++N L++TWH C C C + + F E G+ +C D++
Sbjct: 442 CGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYY------ 494
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L ++ C GCE PI D FL L TWH C C C +L + F S+
Sbjct: 495 ------ALFGTI---CRGCEFPIEAGDMFL-EALGSTWHDTCFVCSVCCESLEGQTFFSK 544
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 545 KDKPLCK 551
Score = 136 (52.9 bits), Expect = 3.2e-08, P = 3.2e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +T++ F E G L+C + + F
Sbjct: 383 CAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF---F 438
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
CG C++ IL + ++N L++TWH C C C + + F E G
Sbjct: 439 APECG------------RCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDG 485
Query: 123 KLFCRNDFF 131
+ +C D++
Sbjct: 486 EPYCETDYY 494
>UNIPROTKB|Q5REN1 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9601
"Pongo abelii" [GO:0001725 "stress fiber" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0031005 "filamin binding"
evidence=ISS] [GO:0033623 "regulation of integrin activation"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005938 GO:GO:0008360
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GO:GO:0001725 GO:GO:0016337 GO:GO:0031005 CTD:54751
HOVERGEN:HBG051561 GO:GO:0033623 EMBL:CR857491
RefSeq:NP_001127194.1 UniGene:Pab.10207 ProteinModelPortal:Q5REN1
GeneID:100174248 KEGG:pon:100174248 InParanoid:Q5REN1
Uniprot:Q5REN1
Length = 375
Score = 143 (55.4 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 36/135 (26%), Positives = 63/135 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS--REGKLFCRNDFFRSPVR 62
C C + + D ++ L + +H C C C + D+ F+ + +++C +DF+R +
Sbjct: 245 CGKCGEVVRDH-IIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDFYR---K 300
Query: 63 FPSGCGVGLSSSMLISCAGCEKPIL-----DKFLLNVLERTWHADCVRCYDCHHTLS--- 114
F C + CE PI+ D F + + R++H +C RC DC LS
Sbjct: 301 FAPVCSI------------CENPIIPRDGKDAFKIECMGRSFHENCYRCEDCRILLSVEP 348
Query: 115 -DK-CFSREGKLFCR 127
D+ C+ +LFC+
Sbjct: 349 TDQGCYPLNNRLFCK 363
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 31/131 (23%), Positives = 57/131 (43%)
Query: 5 CAGCEKPILDKFL-LNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
CA C K + + L + ++R +HA C C C L+ + F ++G+ C
Sbjct: 185 CAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCE--------- 235
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS--R 120
P C L C C + + D ++ L + +H C C C + D+ F+
Sbjct: 236 -P--C----YQDTLERCGKCGEVVRDH-IIRALGQAFHPSCFTCVTCARCIGDESFALGS 287
Query: 121 EGKLFCRNDFF 131
+ +++C +DF+
Sbjct: 288 QNEVYCLDDFY 298
>RGD|621076 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain 5" species:10116 "Rattus
norvegicus" [GO:0003779 "actin binding" evidence=IDA] [GO:0005080
"protein kinase C binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0007507 "heart
development" evidence=NAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015629 "actin cytoskeleton" evidence=IEA;ISO] [GO:0016020
"membrane" evidence=IDA] [GO:0030018 "Z disc" evidence=IEA;ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0030159 "receptor
signaling complex scaffold activity" evidence=NAS] [GO:0042805
"actinin binding" evidence=IDA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IMP] [GO:0051963 "regulation of synapse assembly"
evidence=IDA] [GO:0061001 "regulation of dendritic spine
morphogenesis" evidence=IDA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
RGD:621076 GO:GO:0005829 GO:GO:0005886 GO:GO:0003779 GO:GO:0005080
GO:GO:0014069 GO:GO:0007507 GO:GO:0030018 GO:GO:0016020
GO:GO:0046872 GO:GO:0015629 GO:GO:0030054 GO:GO:0045211
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963 SUPFAM:SSF50156
GO:GO:0030159 GO:GO:0047485 GO:GO:0061001 GO:GO:0042805
eggNOG:NOG286537 HOGENOM:HOG000220936 HOVERGEN:HBG051478 CTD:10611
OrthoDB:EOG4FTW06 EMBL:U48247 IPI:IPI00210187 RefSeq:NP_445778.1
UniGene:Rn.210185 ProteinModelPortal:Q62920 SMR:Q62920
IntAct:Q62920 STRING:Q62920 PhosphoSite:Q62920 PRIDE:Q62920
GeneID:64353 KEGG:rno:64353 InParanoid:Q62920 NextBio:613036
ArrayExpress:Q62920 Genevestigator:Q62920
GermOnline:ENSRNOG00000016419 Uniprot:Q62920
Length = 591
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 39/127 (30%), Positives = 59/127 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C++ IL + ++N L++TWH C C C + + F E G+ +C D++
Sbjct: 474 CGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYY------ 526
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L ++ C GCE PI D FL L TWH C C C +L + F S+
Sbjct: 527 ------ALFGTI---CRGCEFPIEAGDMFL-EALGSTWHDTCFVCSVCCESLEGQTFFSK 576
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 577 KDKPLCK 583
Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +T++ F E G L+C + + F
Sbjct: 415 CAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF---F 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
CG C++ IL + ++N L++TWH C C C + + F E G
Sbjct: 471 APECG------------RCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDG 517
Query: 123 KLFCRNDFF 131
+ +C D++
Sbjct: 518 EPYCETDYY 526
>UNIPROTKB|Q62920 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain protein 5" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 RGD:621076 GO:GO:0005829 GO:GO:0005886 GO:GO:0003779
GO:GO:0005080 GO:GO:0014069 GO:GO:0007507 GO:GO:0030018
GO:GO:0016020 GO:GO:0046872 GO:GO:0015629 GO:GO:0030054
GO:GO:0045211 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963
SUPFAM:SSF50156 GO:GO:0030159 GO:GO:0047485 GO:GO:0061001
GO:GO:0042805 eggNOG:NOG286537 HOGENOM:HOG000220936
HOVERGEN:HBG051478 CTD:10611 OrthoDB:EOG4FTW06 EMBL:U48247
IPI:IPI00210187 RefSeq:NP_445778.1 UniGene:Rn.210185
ProteinModelPortal:Q62920 SMR:Q62920 IntAct:Q62920 STRING:Q62920
PhosphoSite:Q62920 PRIDE:Q62920 GeneID:64353 KEGG:rno:64353
InParanoid:Q62920 NextBio:613036 ArrayExpress:Q62920
Genevestigator:Q62920 GermOnline:ENSRNOG00000016419 Uniprot:Q62920
Length = 591
Score = 146 (56.5 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 39/127 (30%), Positives = 59/127 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C++ IL + ++N L++TWH C C C + + F E G+ +C D++
Sbjct: 474 CGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYY------ 526
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L ++ C GCE PI D FL L TWH C C C +L + F S+
Sbjct: 527 ------ALFGTI---CRGCEFPIEAGDMFL-EALGSTWHDTCFVCSVCCESLEGQTFFSK 576
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 577 KDKPLCK 583
Score = 136 (52.9 bits), Expect = 3.5e-08, P = 3.5e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +T++ F E G L+C + + F
Sbjct: 415 CAHCNQAIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF---F 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
CG C++ IL + ++N L++TWH C C C + + F E G
Sbjct: 471 APECG------------RCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDG 517
Query: 123 KLFCRNDFF 131
+ +C D++
Sbjct: 518 EPYCETDYY 526
>UNIPROTKB|G3MY19 [details] [associations]
symbol:PDLIM5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030018 "Z disc" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0030018 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104411 OMA:SSPEKYH EMBL:DAAA02016918
EMBL:DAAA02016919 EMBL:DAAA02016920 Ensembl:ENSBTAT00000064437
Uniprot:G3MY19
Length = 544
Score = 145 (56.1 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 39/127 (30%), Positives = 59/127 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C++ IL + ++N L++TWH C C C + + F E G+ +C D++
Sbjct: 427 CGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYY------ 479
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L ++ C GCE PI D FL L TWH C C C +L + F S+
Sbjct: 480 ------ALFGTI---CRGCEFPIEAGDMFL-EALGYTWHDTCFVCSVCCESLEGQTFFSK 529
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 530 KDKPLCK 536
Score = 128 (50.1 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 35/129 (27%), Positives = 58/129 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I L L ++WH + C C +T++ F E G L+C + + F
Sbjct: 367 CAHCNQVISRGPFLVALGKSWHPEEFNCAHCKNTMAYIGFVEEQGALYCELCYEKF---F 423
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
CG C++ IL + ++N L++TWH C C C + + F E G
Sbjct: 424 APECG------------RCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDG 470
Query: 123 KLFCRNDFF 131
+ +C D++
Sbjct: 471 EPYCETDYY 479
>UNIPROTKB|E2RQT0 [details] [associations]
symbol:LIMK1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051444 "negative regulation of
ubiquitin-protein ligase activity" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045773
"positive regulation of axon extension" evidence=IEA] [GO:0043005
"neuron projection" evidence=IEA] [GO:0032233 "positive regulation
of actin filament bundle assembly" evidence=IEA] [GO:0031072 "heat
shock protein binding" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004672
"protein kinase activity" evidence=IEA] Pfam:PF00595 Pfam:PF00412
InterPro:IPR000719 InterPro:IPR001245 InterPro:IPR001478
InterPro:IPR001781 InterPro:IPR011009 InterPro:IPR017441
Pfam:PF07714 PRINTS:PR00109 PROSITE:PS00107 PROSITE:PS00478
PROSITE:PS50011 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 SUPFAM:SSF56112 GO:GO:0008270 GO:GO:0043005
GO:GO:0005925 GO:GO:0004672 Gene3D:2.10.110.10 GO:GO:0045773
SUPFAM:SSF50156 GO:GO:0051444 GeneTree:ENSGT00530000063025
KO:K05743 GO:GO:0032233 CTD:3984 OMA:CFRCCEC EMBL:AAEX03004238
RefSeq:XP_849646.1 ProteinModelPortal:E2RQT0
Ensembl:ENSCAFT00000019799 GeneID:489800 KEGG:cfa:489800
NextBio:20862921 Uniprot:E2RQT0
Length = 647
Score = 146 (56.5 bits), Expect = 3.4e-09, P = 3.4e-09
Identities = 35/130 (26%), Positives = 58/130 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRNDFFRSPVRFP 64
CA C + I D L L WHADC R +C+ +LS + ++G+LFC+ D++ R+
Sbjct: 25 CASCGQRIYDGQYLQALNADWHADCFRGCECNASLSHPYYQKDGQLFCKRDYW---ARYG 81
Query: 65 SGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK---CFSRE 121
+C GC + I ++ E +H +C C C + D
Sbjct: 82 E------------ACHGCSEHITKGLVMVAGELKYHPECFICLTCGTFIGDGDTYTLVEH 129
Query: 122 GKLFCRNDFF 131
KL+C + ++
Sbjct: 130 SKLYCGHCYY 139
Score = 131 (51.2 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 69 VGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSREGKLFCRN 128
+G S L CA C + I D L L WHADC R +C+ +LS + ++G+LFC+
Sbjct: 15 MGEEGSELPMCASCGQRIYDGQYLQALNADWHADCFRGCECNASLSHPYYQKDGQLFCKR 74
Query: 129 DFF 131
D++
Sbjct: 75 DYW 77
>FB|FBgn0013751 [details] [associations]
symbol:Awh "Arrowhead" species:7227 "Drosophila melanogaster"
[GO:0007444 "imaginal disc development" evidence=IMP] [GO:0005634
"nucleus" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
EMBL:AE014296 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007444 EMBL:U82539 EMBL:AY071197
EMBL:BT025230 RefSeq:NP_523907.2 RefSeq:NP_728906.1 UniGene:Dm.6063
ProteinModelPortal:Q8IRC7 SMR:Q8IRC7 PRIDE:Q8IRC7
EnsemblMetazoa:FBtr0073156 GeneID:38451 KEGG:dme:Dmel_CG1072
UCSC:CG1072-RA CTD:38451 FlyBase:FBgn0013751 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 HOGENOM:HOG000214908 InParanoid:Q8IRC7
OMA:IHDRYLL OrthoDB:EOG42BVRJ PhylomeDB:Q8IRC7 GenomeRNAi:38451
NextBio:808729 Bgee:Q8IRC7 GermOnline:CG1072 Uniprot:Q8IRC7
Length = 275
Score = 139 (54.0 bits), Expect = 3.5e-09, P = 3.5e-09
Identities = 30/75 (40%), Positives = 43/75 (57%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFFRS 59
L SCA C +PI D+F L V +WHA C+RC C L CF RE +++C+ D+ ++
Sbjct: 5 LRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKN 64
Query: 60 PVRFPSGCGVGLSSS 74
S C G+S+S
Sbjct: 65 FGAKCSKCCRGISAS 79
Score = 130 (50.8 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 25/57 (43%), Positives = 34/57 (59%)
Query: 76 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDF 130
L SCA C +PI D+F L V +WHA C+RC C L CF RE +++C+ D+
Sbjct: 5 LRSCAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADY 61
>UNIPROTKB|E2QW94 [details] [associations]
symbol:LDB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
SUPFAM:SSF50156 InterPro:IPR006643 SMART:SM00735
GeneTree:ENSGT00700000104411 EMBL:AAEX03002925 EMBL:AAEX03002926
Ensembl:ENSCAFT00000025496 NextBio:20854479 Uniprot:E2QW94
Length = 586
Score = 145 (56.1 bits), Expect = 3.7e-09, P = 3.7e-09
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 469 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 520
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 521 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 571
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 572 KDKPLCK 578
Score = 129 (50.5 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 410 CGHCNNVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPI 468
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 469 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 510
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 511 DGEPYCEKDY 520
>UNIPROTKB|F1PP40 [details] [associations]
symbol:CRIP2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 CTD:1397 OMA:YIYEKPQ EMBL:AAEX03006125
RefSeq:XP_855529.3 Ensembl:ENSCAFT00000029280 GeneID:612710
KEGG:cfa:612710 Uniprot:F1PP40
Length = 208
Score = 94 (38.1 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 22/86 (25%), Positives = 39/86 (45%)
Query: 1 MLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFCRNDFFRS 59
M C C+K + ++ L + WH C++C C+ TL+ + +GK FC + +
Sbjct: 1 MASKCPKCDKTVYFAEKVSSLGKDWHKFCLKCERCNKTLTPGGHAEHDGKPFCHKPCYAT 60
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKP 85
+ P G +G + S + E P
Sbjct: 61 -LFGPKGVNIGGAGSYIYDKPSAEGP 85
Score = 69 (29.3 bits), Expect = 3.7e-09, Sum P(2) = 3.7e-09
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSR-EGKLFC 126
C C K + + L + WH C+RC C TL+ + +G+ +C
Sbjct: 126 CPRCNKRVYFAEKVTSLGKDWHRPCLRCERCGKTLTPGGHAEHDGQPYC 174
>MGI|MGI:1927489 [details] [associations]
symbol:Pdlim5 "PDZ and LIM domain 5" species:10090 "Mus
musculus" [GO:0003779 "actin binding" evidence=ISO] [GO:0005080
"protein kinase C binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005829 "cytosol" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=ISO] [GO:0016020
"membrane" evidence=ISO] [GO:0030018 "Z disc" evidence=IDA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0042805 "actinin
binding" evidence=ISO] [GO:0043005 "neuron projection"
evidence=IEA] [GO:0045202 "synapse" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=ISO] [GO:0051963 "regulation of synapse assembly"
evidence=ISO] [GO:0061001 "regulation of dendritic spine
morphogenesis" evidence=ISO] Pfam:PF00595 Pfam:PF00412
InterPro:IPR001478 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132 SMART:SM00228
MGI:MGI:1927489 GO:GO:0005829 GO:GO:0005886 GO:GO:0014069
GO:GO:0030018 GO:GO:0046872 GO:GO:0015629 GO:GO:0030054
GO:GO:0045211 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0051963
SUPFAM:SSF50156 GO:GO:0061001 eggNOG:NOG286537 HOGENOM:HOG000220936
HOVERGEN:HBG051478 GeneTree:ENSGT00700000104411 CTD:10611
OMA:SGLHANA OrthoDB:EOG4FTW06 EMBL:AB016586 EMBL:AB016587
EMBL:AB016588 EMBL:AK147999 EMBL:BC037476 IPI:IPI00415684
IPI:IPI00415685 IPI:IPI00828969 RefSeq:NP_001177781.1
RefSeq:NP_001177783.1 RefSeq:NP_001177784.1 RefSeq:NP_001177785.1
RefSeq:NP_062782.2 UniGene:Mm.117709 PDB:1WF7 PDBsum:1WF7
ProteinModelPortal:Q8CI51 SMR:Q8CI51 IntAct:Q8CI51 STRING:Q8CI51
PhosphoSite:Q8CI51 PaxDb:Q8CI51 PRIDE:Q8CI51
Ensembl:ENSMUST00000029941 Ensembl:ENSMUST00000168967 GeneID:56376
KEGG:mmu:56376 UCSC:uc008ron.2 UCSC:uc012cyt.1 InParanoid:Q3UGD0
EvolutionaryTrace:Q8CI51 NextBio:312444 Bgee:Q8CI51
CleanEx:MM_PDLIM5 Genevestigator:Q8CI51
GermOnline:ENSMUSG00000028273 Uniprot:Q8CI51
Length = 591
Score = 145 (56.1 bits), Expect = 3.8e-09, P = 3.8e-09
Identities = 39/127 (30%), Positives = 59/127 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
C C++ IL + ++N L++TWH C C C + + F E G+ +C D++
Sbjct: 474 CGRCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDGEPYCETDYY------ 526
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
L ++ C GCE PI D FL L TWH C C C +L + F S+
Sbjct: 527 ------ALFGTI---CRGCEFPIEAGDMFL-EALGYTWHDTCFVCSVCCESLEGQTFFSK 576
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 577 KDKPLCK 583
Score = 135 (52.6 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 36/129 (27%), Positives = 60/129 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C + I FL+ L ++WH + C C +T++ F E G L+C + + F
Sbjct: 415 CAHCNQVIRGPFLV-ALGKSWHPEEFNCAHCKNTMAYIGFVEEKGALYCELCYEKF---F 470
Query: 64 PSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-G 122
CG C++ IL + ++N L++TWH C C C + + F E G
Sbjct: 471 APECG------------RCQRKILGE-VINALKQTWHVSCFVCVACGKPIRNNVFHLEDG 517
Query: 123 KLFCRNDFF 131
+ +C D++
Sbjct: 518 EPYCETDYY 526
>UNIPROTKB|Q5F464 [details] [associations]
symbol:LPP "Lipoma-preferred partner homolog" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0007155
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810
EMBL:AJ851436 IPI:IPI00579566 RefSeq:NP_001026738.1
UniGene:Gga.22742 ProteinModelPortal:Q5F464 SMR:Q5F464
Ensembl:ENSGALT00000011871 GeneID:429148 KEGG:gga:429148 CTD:4026
eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602
InParanoid:Q5F464 KO:K16676 OMA:NDSDPAY OrthoDB:EOG4XKV6J
NextBio:20829961 Uniprot:Q5F464
Length = 604
Score = 145 (56.1 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 36/132 (27%), Positives = 61/132 (46%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE--GKLFCRNDFFRS 59
L C+ C KPI+++ +L + +H C C CH +L F+ + G + C DF +
Sbjct: 465 LEQCSVCAKPIMER-ILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGNIHCIEDFHK- 522
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDK--- 116
+F C V ++ G E+ + + L+R +H C RC DC LS+
Sbjct: 523 --KFAPRCSV--CKEPIMPAPGQEETVR----IVALDRDFHVQCYRCEDCGGLLSEGDNQ 574
Query: 117 -CFSREGKLFCR 127
C+ +G + C+
Sbjct: 575 GCYPLDGHILCK 586
>ZFIN|ZDB-GENE-060531-41 [details] [associations]
symbol:si:ch211-236k19.2 "si:ch211-236k19.2"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 ZFIN:ZDB-GENE-060531-41
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 EMBL:BX255921 IPI:IPI01006880
Ensembl:ENSDART00000073963 OMA:ANDWIRR Uniprot:F6P152
Length = 255
Score = 137 (53.3 bits), Expect = 4.6e-09, P = 4.6e-09
Identities = 35/128 (27%), Positives = 57/128 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDFFRSPVR 62
C GC I D+++L V TWH C++C C +L + CF R ++FCR D+
Sbjct: 2 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDY------ 55
Query: 63 FPSGCGVGLSSSMLISCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFS 119
+S+ I CA C + + ++ +H C C+ C LS ++
Sbjct: 56 ---------NSTFGIKCARCGHQVSANDWIRRAGNDIYHLACFACFFCKRQLSTGEEFGL 106
Query: 120 REGKLFCR 127
E ++ CR
Sbjct: 107 MENQVLCR 114
Score = 122 (48.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 21/54 (38%), Positives = 31/54 (57%)
Query: 79 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLS--DKCFSREGKLFCRNDF 130
C GC I D+++L V TWH C++C C +L + CF R ++FCR D+
Sbjct: 2 CTGCSTEIFDRYVLKVNGLTWHLRCLQCSVCAVSLGHQNSCFIRNKEIFCRTDY 55
>UNIPROTKB|Q1JQB5 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9913
"Bos taurus" [GO:0001725 "stress fiber" evidence=ISS] [GO:0031005
"filamin binding" evidence=ISS] [GO:0033623 "regulation of integrin
activation" evidence=ISS] [GO:0016337 "cell-cell adhesion"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0043231 GO:GO:0005938
GO:GO:0008360 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 GO:GO:0031005 EMBL:BC116079
IPI:IPI00712901 RefSeq:NP_001070423.1 UniGene:Bt.2860
ProteinModelPortal:Q1JQB5 STRING:Q1JQB5 Ensembl:ENSBTAT00000024926
GeneID:767833 KEGG:bta:767833 CTD:54751 eggNOG:NOG315774
HOGENOM:HOG000007533 HOVERGEN:HBG051561 InParanoid:Q1JQB5
OMA:NRLFCKP OrthoDB:EOG4PRSRD NextBio:20918202 GO:GO:0033623
Uniprot:Q1JQB5
Length = 378
Score = 141 (54.7 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 36/138 (26%), Positives = 64/138 (46%)
Query: 2 LISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS--REGKLFCRNDFFRS 59
L C C + ++ + ++ L + +H C C C + D+ F+ + +++C +DF+R
Sbjct: 245 LEKCGKCGE-VVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDDFYR- 302
Query: 60 PVRFPSGCGVGLSSSMLISCAGCEKPIL-----DKFLLNVLERTWHADCVRCYDCHHTLS 114
+F C + CE PI+ D F + + R +H +C RC DC LS
Sbjct: 303 --KFAPVCSI------------CENPIIPRDGKDAFKIECMGRNFHENCYRCEDCRVLLS 348
Query: 115 ----DK-CFSREGKLFCR 127
D+ C+ +LFC+
Sbjct: 349 VEPTDQGCYPLNNRLFCK 366
Score = 114 (45.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 30/131 (22%), Positives = 58/131 (44%)
Query: 5 CAGCEKPILDKFL-LNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVR 62
CA C K + + L + ++R +HA C C C L+ + F ++G+ C
Sbjct: 188 CAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCE--------- 238
Query: 63 FPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFS--R 120
P C L C C + ++ + ++ L + +H C C C + D+ F+
Sbjct: 239 -P--C----YQDTLEKCGKCGE-VVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDS 290
Query: 121 EGKLFCRNDFF 131
+ +++C +DF+
Sbjct: 291 QNEVYCLDDFY 301
>UNIPROTKB|E2QX48 [details] [associations]
symbol:LDB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
SUPFAM:SSF50156 GeneTree:ENSGT00700000104411 EMBL:AAEX03002925
EMBL:AAEX03002926 Ensembl:ENSCAFT00000025464 Uniprot:E2QX48
Length = 695
Score = 145 (56.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 578 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 629
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 630 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 680
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 681 KDKPLCK 687
Score = 129 (50.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 519 CGHCNNVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPI 577
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 578 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 619
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 620 DGEPYCEKDY 629
>ZFIN|ZDB-GENE-031219-1 [details] [associations]
symbol:fhl1b "four and a half LIM domains 1b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-031219-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q05158 HOVERGEN:HBG074526 KO:K14365
EMBL:BC053279 IPI:IPI00481621 RefSeq:NP_954687.1 UniGene:Dr.84449
ProteinModelPortal:Q7T327 SMR:Q7T327 GeneID:387528 KEGG:dre:387528
CTD:387528 InParanoid:Q7T327 NextBio:20814152 ArrayExpress:Q7T327
Uniprot:Q7T327
Length = 280
Score = 138 (53.6 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 36/128 (28%), Positives = 58/128 (45%)
Query: 4 SCAGCEKPI-LDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPV 61
+C C + I D L+ + WH+DC RC C+ L+ + F S++ ++ C
Sbjct: 39 TCTECRRTISTDSKELHHKGKYWHSDCFRCAKCYKNLAKESFTSKDDRILC--------- 89
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLER--TWHADCVRCYDCHHTLSDKCF- 118
G S C GC KPIL NV + +WH +C +CY C + +K F
Sbjct: 90 ------GTCSSREDAPRCHGCYKPILPG-TENVEYKGNSWHDECFKCYQCQKPIGNKSFI 142
Query: 119 SREGKLFC 126
++ ++C
Sbjct: 143 TKNNNVYC 150
Score = 136 (52.9 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 39/128 (30%), Positives = 59/128 (46%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SREGKLFCRNDFFRSPVRF 63
CA C+KPI + N ++ WH++C C C L+ F S E K++C D ++S V
Sbjct: 162 CACCKKPITTGGV-NYQDQPWHSECFVCSSCRKPLAGTRFTSHEEKVYCV-DCYKSTVAK 219
Query: 64 PSGCGVGLSSSMLISCAGCEKPI--LDKF--LLNVLERTWHADCVRCYDCHHTLSDKCF- 118
C+GC+ PI K ++N +WH C C C L+DK F
Sbjct: 220 --------------KCSGCQNPITGFGKATNVVNYEGGSWHDYCFNCKKCSLNLADKRFV 265
Query: 119 SREGKLFC 126
+ G ++C
Sbjct: 266 AHSGHIYC 273
>UNIPROTKB|J9P0E5 [details] [associations]
symbol:LDB3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
SUPFAM:SSF50156 OMA:CTSQATT InterPro:IPR006643 SMART:SM00735
GeneTree:ENSGT00700000104411 EMBL:AAEX03002925 EMBL:AAEX03002926
Ensembl:ENSCAFT00000043135 Uniprot:J9P0E5
Length = 705
Score = 145 (56.1 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 39/127 (30%), Positives = 57/127 (44%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDFFRSPVRF 63
CA C I+ + +++ L +TWH C C C + F E G+ +C D+
Sbjct: 588 CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDY------- 639
Query: 64 PSGCGVGLSSSMLISCAGCEKPIL--DKFLLNVLERTWHADCVRCYDCHHTLSDKCF-SR 120
V L S+ C GC+ P+ DKF+ L TWH C C CH L + F S+
Sbjct: 640 -----VNLFST---KCHGCDFPVEAGDKFI-EALGHTWHDTCFICAVCHVNLEGQPFYSK 690
Query: 121 EGKLFCR 127
+ K C+
Sbjct: 691 KDKPLCK 697
Score = 129 (50.5 bits), Expect = 2.5e-07, P = 2.5e-07
Identities = 34/130 (26%), Positives = 55/130 (42%)
Query: 5 CAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE-GKLFCRNDF--FRSPV 61
C C I FL+ + R+WH + C C +L+D CF E ++C + F +P+
Sbjct: 529 CGHCNNVIRGPFLV-AMGRSWHPEEFNCAYCKTSLADVCFVEEQSNVYCERCYEQFFAPI 587
Query: 62 RFPSGCGVGLSSSMLISCAGCEKPILDKFLLNVLERTWHADCVRCYDCHHTLSDKCFSRE 121
CA C I+ + +++ L +TWH C C C + F E
Sbjct: 588 -----------------CAKCNTKIMGE-VMHALRQTWHTTCFVCAACKKPFGNSLFHME 629
Query: 122 -GKLFCRNDF 130
G+ +C D+
Sbjct: 630 DGEPYCEKDY 639
WARNING: HSPs involving 382 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.332 0.144 0.517 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 131 131 0.00091 102 3 12 21 0.43 30
29 0.42 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 632
No. of states in DFA: 505 (54 KB)
Total size of DFA: 113 KB (2075 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 11.10u 0.11s 11.21t Elapsed: 00:00:01
Total cpu time: 11.14u 0.11s 11.25t Elapsed: 00:00:01
Start: Thu Aug 15 11:40:34 2013 End: Thu Aug 15 11:40:35 2013
WARNINGS ISSUED: 2