Your job contains 1 sequence.
>psy4441
MKRSSSRDTPPLRNKRTRSSLGRYDDSSDERLSPERGHRSRARSPPSPRPRYAYEYRDEY
GRTREAVSDRPPSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLDERVAYV
CFRSAEDARDAKHSKPRIILYDKVAVVDPVYETHASRSRPRSRSYSPPPPEYDRYYSRSP
VLERRPGLPPPLPHPGERPYGYGPPVLRHEFRRDIPPHHVVLPHHEFLPRGPPLHHIPPH
HPTYLKQEN
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4441
(249 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0027548 - symbol:nito "spenito" species:7227 "Dros... 381 2.6e-34 1
ZFIN|ZDB-GENE-080204-91 - symbol:rbm15b "RNA binding moti... 207 3.1e-19 3
UNIPROTKB|Q96T37 - symbol:RBM15 "Putative RNA-binding pro... 197 1.3e-16 2
UNIPROTKB|F1S620 - symbol:RBM15 "Uncharacterized protein"... 197 3.2e-16 2
UNIPROTKB|F1S619 - symbol:RBM15 "Uncharacterized protein"... 197 3.3e-16 2
ZFIN|ZDB-GENE-041008-192 - symbol:rbm15 "RNA binding moti... 208 1.2e-15 1
UNIPROTKB|E1BFX6 - symbol:RBM15 "Uncharacterized protein"... 197 1.9e-14 1
MGI|MGI:1923598 - symbol:Rbm15b "RNA binding motif protei... 185 2.0e-14 2
UNIPROTKB|J9PBG8 - symbol:RBM15 "Uncharacterized protein"... 197 2.1e-14 1
UNIPROTKB|E2R9C6 - symbol:RBM15 "Uncharacterized protein"... 197 2.1e-14 1
UNIPROTKB|Q8NDT2 - symbol:RBM15B "Putative RNA-binding pr... 184 2.5e-14 2
UNIPROTKB|F1SIZ8 - symbol:RBM15B "Uncharacterized protein... 184 2.5e-14 2
UNIPROTKB|E2RPV8 - symbol:RBM15B "Uncharacterized protein... 184 2.6e-14 2
UNIPROTKB|F6RM04 - symbol:RBM15B "Uncharacterized protein... 184 2.9e-14 2
UNIPROTKB|F1NRZ4 - symbol:LOC100859595 "Uncharacterized p... 186 3.0e-14 2
>FB|FBgn0027548 [details] [associations]
symbol:nito "spenito" species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0048749 "compound eye
development" evidence=IMP] [GO:0030177 "positive regulation of Wnt
receptor signaling pathway" evidence=IGI] [GO:0035222 "wing disc
pattern formation" evidence=IMP] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
EMBL:AE013599 GO:GO:0022008 GO:GO:0000166 GO:GO:0003729
Gene3D:3.30.70.330 HSSP:P19339 GO:GO:0071011 GO:GO:0000398
InterPro:IPR012921 Pfam:PF07744 eggNOG:NOG250829 PROSITE:PS50917
Gene3D:2.40.290.10 InterPro:IPR016194 SUPFAM:SSF100939
InterPro:IPR010912 KO:K13190 GeneTree:ENSGT00530000063730
EMBL:AF145664 RefSeq:NP_610339.1 RefSeq:NP_724633.1 UniGene:Dm.2130
SMR:Q7KMJ6 IntAct:Q7KMJ6 STRING:Q7KMJ6 EnsemblMetazoa:FBtr0088857
EnsemblMetazoa:FBtr0088858 GeneID:35756 KEGG:dme:Dmel_CG2910
UCSC:CG2910-RA CTD:35756 FlyBase:FBgn0027548 InParanoid:Q7KMJ6
OMA:CKVELSG OrthoDB:EOG4W3R31 GenomeRNAi:35756 NextBio:795063
Uniprot:Q7KMJ6
Length = 793
Score = 381 (139.2 bits), Expect = 2.6e-34, P = 2.6e-34
Identities = 86/163 (52%), Positives = 109/163 (66%)
Query: 1 MKRSSSRDTPPL-RNKRTRSS--LGR-YDDSSD------ERLSPERGHXXXXXXXXXXXX 50
MKRS+SR P R+ +R+S +GR YD+ S ERLSPER
Sbjct: 20 MKRSASRSPGPASRSSLSRNSRSMGRGYDNGSGVPGDSPERLSPER----MRRRLDRSPS 75
Query: 51 XXXXXXXDEYGRTREAVSDRPPSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLS 110
+ Y R ++RP YKVLCVSAL PKA D+ I++TLYREYKKFGD S+RL+
Sbjct: 76 RYGSPHREPYMRGPPP-AERPAGYKVLCVSALPPKAPDDFIEETLYREYKKFGDFSVRLA 134
Query: 111 HDLDERVAYVCFRSAEDARDAKHSKPRIILYDKVAVVDPVYET 153
HDLDERVAYVCFR+ EDAR+AKH KPR+I+YDK+A+V+PVY++
Sbjct: 135 HDLDERVAYVCFRTPEDAREAKHHKPRLIIYDKMAIVEPVYKS 177
>ZFIN|ZDB-GENE-080204-91 [details] [associations]
symbol:rbm15b "RNA binding motif protein 15B"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
ZFIN:ZDB-GENE-080204-91 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 GeneTree:ENSGT00530000063730 EMBL:CU856621
IPI:IPI00931594 Ensembl:ENSDART00000136125 Bgee:E9QBX7
Uniprot:E9QBX7
Length = 630
Score = 207 (77.9 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 44/94 (46%), Positives = 64/94 (68%)
Query: 61 GRT--REAVSDRPPSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERV 117
G+T E V R YK L +S L + SDE ++D L+ E+KKFGD+S++LSH + R+
Sbjct: 88 GKTPSAETVGARL-EYKTLLISNLGSQLSDEHVEDGLFHEFKKFGDVSVKLSHTPELGRI 146
Query: 118 AYVCFRSAEDARDAKHSKPRIILYDKVAVVDPVY 151
AYV FR E AR+A+H+K R++LYD+ V+P+Y
Sbjct: 147 AYVNFRHTEHAREARHAKTRLVLYDRPLKVEPMY 180
Score = 40 (19.1 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 10/20 (50%), Positives = 11/20 (55%)
Query: 1 MKRSSSRDTPPLRN--KRTR 18
MKR + RD P R KR R
Sbjct: 1 MKRQAERDASPSRTLAKRVR 20
Score = 34 (17.0 bits), Expect = 3.1e-19, Sum P(3) = 3.1e-19
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 202 YGPPVLRHEFRRDIPPHHVVLP 223
Y PP+L PPH+ +LP
Sbjct: 434 YQPPLLP-------PPHYDLLP 448
Score = 34 (17.0 bits), Expect = 1.3e-18, Sum P(3) = 1.3e-18
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 2 KRSSSRDTPPLRNKRTRSSL 21
KRS SR+ R + R SL
Sbjct: 44 KRSRSREREKPRVREERESL 63
>UNIPROTKB|Q96T37 [details] [associations]
symbol:RBM15 "Putative RNA-binding protein 15" species:9606
"Homo sapiens" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0001569 "patterning of blood
vessels" evidence=IEA] [GO:0007221 "positive regulation of
transcription of Notch receptor target" evidence=IEA] [GO:0045638
"negative regulation of myeloid cell differentiation" evidence=IEA]
[GO:0048536 "spleen development" evidence=IEA] [GO:0060412
"ventricular septum morphogenesis" evidence=IEA] [GO:0060674
"placenta blood vessel development" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005634 GO:GO:0019048 GO:GO:0000166
EMBL:CH471122 Gene3D:3.30.70.330 GO:GO:0003723 GO:GO:0001569
GO:GO:0048536 InterPro:IPR012921 Pfam:PF07744 GO:GO:0045638
GO:GO:0060412 GO:GO:0060674 eggNOG:NOG250829 PROSITE:PS50917
Gene3D:2.40.290.10 InterPro:IPR016194 SUPFAM:SSF100939
InterPro:IPR010912 EMBL:AF364035 EMBL:AJ303089 EMBL:AJ303090
EMBL:AL355488 GO:GO:0007221 HOVERGEN:HBG058366 KO:K13190
EMBL:AF368062 EMBL:AF368063 EMBL:AF368064 EMBL:AJ297259
EMBL:AK022541 EMBL:AK025596 EMBL:BC006397 EMBL:BC062316
EMBL:BC098140 EMBL:BC103507 IPI:IPI00102752 IPI:IPI00220716
IPI:IPI00220717 RefSeq:NP_001188474.1 RefSeq:NP_073605.4
UniGene:Hs.435947 UniGene:Hs.708172 ProteinModelPortal:Q96T37
SMR:Q96T37 IntAct:Q96T37 STRING:Q96T37 PhosphoSite:Q96T37
DMDM:32363506 PaxDb:Q96T37 PRIDE:Q96T37 DNASU:64783
Ensembl:ENST00000369784 GeneID:64783 KEGG:hsa:64783 UCSC:uc001dzl.1
UCSC:uc001dzm.1 UCSC:uc021orn.1 CTD:64783 GeneCards:GC01P110876
HGNC:HGNC:14959 HPA:CAB015201 HPA:HPA019824 MIM:606077
neXtProt:NX_Q96T37 PharmGKB:PA34264 InParanoid:Q96T37 OMA:DYLVMIV
OrthoDB:EOG41ZF99 PhylomeDB:Q96T37 ChiTaRS:RBM15 GenomeRNAi:64783
NextBio:66822 Bgee:Q96T37 Genevestigator:Q96T37 Uniprot:Q96T37
Length = 977
Score = 197 (74.4 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAVY 251
Score = 47 (21.6 bits), Expect = 1.3e-16, Sum P(2) = 1.3e-16
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 3 RSSSRDTPPLRNKRTRSSLGRYDDSSDERLSPERG 37
R++ RD P R+ R R ++ + S+ R++ RG
Sbjct: 2 RTAGRDPVPRRSPRWRRAVPLCETSAGRRVTQLRG 36
>UNIPROTKB|F1S620 [details] [associations]
symbol:RBM15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012921
Pfam:PF07744 PROSITE:PS50917 Gene3D:2.40.290.10 InterPro:IPR016194
SUPFAM:SSF100939 InterPro:IPR010912 GeneTree:ENSGT00530000063730
EMBL:CU915404 Ensembl:ENSSSCT00000007457 Uniprot:F1S620
Length = 971
Score = 197 (74.4 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAVY 251
Score = 43 (20.2 bits), Expect = 3.2e-16, Sum P(2) = 3.2e-16
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 3 RSSSRDTPPLRNKRTRSSLGRYDDSSDERLSPERG 37
+++ RD P R+ R R ++ + S+ R++ RG
Sbjct: 2 KTAGRDPLPRRSPRWRRAVPLCETSAGRRVNQLRG 36
>UNIPROTKB|F1S619 [details] [associations]
symbol:RBM15 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0007221 "positive regulation of transcription of
Notch receptor target" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000122 GO:GO:0001569
GO:GO:0048536 InterPro:IPR012921 Pfam:PF07744 GO:GO:0045638
GO:GO:0060412 GO:GO:0060674 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912
GO:GO:0007221 GeneTree:ENSGT00530000063730 OMA:DYLVMIV
EMBL:CU915404 Ensembl:ENSSSCT00000007458 Uniprot:F1S619
Length = 979
Score = 197 (74.4 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAVY 251
Score = 43 (20.2 bits), Expect = 3.3e-16, Sum P(2) = 3.3e-16
Identities = 10/35 (28%), Positives = 20/35 (57%)
Query: 3 RSSSRDTPPLRNKRTRSSLGRYDDSSDERLSPERG 37
+++ RD P R+ R R ++ + S+ R++ RG
Sbjct: 2 KTAGRDPLPRRSPRWRRAVPLCETSAGRRVNQLRG 36
>ZFIN|ZDB-GENE-041008-192 [details] [associations]
symbol:rbm15 "RNA binding motif protein 15"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 ZFIN:ZDB-GENE-041008-192 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012921 Pfam:PF07744
PROSITE:PS50917 Gene3D:2.40.290.10 InterPro:IPR016194
SUPFAM:SSF100939 InterPro:IPR010912 GeneTree:ENSGT00530000063730
OMA:DYLVMIV EMBL:BX324132 IPI:IPI00902274
Ensembl:ENSDART00000111617 Bgee:F1RCY7 Uniprot:F1RCY7
Length = 855
Score = 208 (78.3 bits), Expect = 1.2e-15, P = 1.2e-15
Identities = 40/91 (43%), Positives = 60/91 (65%)
Query: 61 GRTREAVSDRPPSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLDERVAYV 120
G R + YK L +S L + SDE I+D L+ E+KKFGD+S+++S DER+A+V
Sbjct: 116 GEARAPLPTNESEYKTLKISELGSQLSDEEIEDGLFHEFKKFGDVSVKISRVNDERIAFV 175
Query: 121 CFRSAEDARDAKHSKPRIILYDKVAVVDPVY 151
FR +DAR AKH++ R++LYD+ ++ VY
Sbjct: 176 NFRRPDDARAAKHARGRLVLYDRPLKIEAVY 206
>UNIPROTKB|E1BFX6 [details] [associations]
symbol:RBM15 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0007221 "positive regulation of transcription of
Notch receptor target" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000122 GO:GO:0001569
GO:GO:0048536 InterPro:IPR012921 Pfam:PF07744 GO:GO:0045638
GO:GO:0060412 GO:GO:0060674 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912
GO:GO:0007221 GeneTree:ENSGT00530000063730 OMA:DYLVMIV
EMBL:DAAA02007553 IPI:IPI00700723 Ensembl:ENSBTAT00000052066
Uniprot:E1BFX6
Length = 914
Score = 197 (74.4 bits), Expect = 1.9e-14, P = 1.9e-14
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 125 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 184
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 185 RAAKHARGRLVLYDRPLKIEAVY 207
>MGI|MGI:1923598 [details] [associations]
symbol:Rbm15b "RNA binding motif protein 15B" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005654 "nucleoplasm" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
MGI:MGI:1923598 GO:GO:0005654 GO:GO:0006355 GO:GO:0008380
GO:GO:0000166 GO:GO:0006397 Gene3D:3.30.70.330 GO:GO:0006351
GO:GO:0003723 InterPro:IPR012921 Pfam:PF07744 GO:GO:0000381
eggNOG:NOG250829 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912 CTD:29890
HOGENOM:HOG000006547 HOVERGEN:HBG058366 KO:K13190 OMA:KRDSERN
OrthoDB:EOG42RD6Z EMBL:AC147636 EMBL:BC052180 EMBL:AK075777
IPI:IPI00278942 RefSeq:NP_780611.3 UniGene:Mm.431589
UniGene:Mm.440089 PDB:1WHY PDBsum:1WHY ProteinModelPortal:Q6PHZ5
SMR:Q6PHZ5 PhosphoSite:Q6PHZ5 PaxDb:Q6PHZ5 PRIDE:Q6PHZ5
Ensembl:ENSMUST00000055843 GeneID:109095 KEGG:mmu:109095
UCSC:uc012gzz.1 GeneTree:ENSGT00530000063730 InParanoid:Q6PHZ5
EvolutionaryTrace:Q6PHZ5 NextBio:361644 Bgee:Q6PHZ5
CleanEx:MM_RBM15B Genevestigator:Q6PHZ5
GermOnline:ENSMUSG00000045365 Uniprot:Q6PHZ5
Length = 887
Score = 185 (70.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 39/87 (44%), Positives = 59/87 (67%)
Query: 68 SDRPPSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERVAYVCFRSAE 126
S P YK L +S+L P E ++D L+ ++K+FG++S+RLSH + RVAYV FR +
Sbjct: 129 STAAPEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQ 188
Query: 127 DARDAK-HSKPR-IILYDKVAVVDPVY 151
DAR+A+ H+ R ++LYD+ V+PVY
Sbjct: 189 DAREARQHALARQLLLYDRPLKVEPVY 215
Score = 37 (18.1 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MKRSSSRDTPP 11
MKR S RD+ P
Sbjct: 1 MKRQSERDSSP 11
>UNIPROTKB|J9PBG8 [details] [associations]
symbol:RBM15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012921
Pfam:PF07744 PROSITE:PS50917 Gene3D:2.40.290.10 InterPro:IPR016194
SUPFAM:SSF100939 InterPro:IPR010912 KO:K13190
GeneTree:ENSGT00530000063730 CTD:64783 EMBL:AAEX03004718
RefSeq:XP_537035.1 ProteinModelPortal:J9PBG8
Ensembl:ENSCAFT00000043159 GeneID:479909 KEGG:cfa:479909
Uniprot:J9PBG8
Length = 969
Score = 197 (74.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAVY 251
>UNIPROTKB|E2R9C6 [details] [associations]
symbol:RBM15 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060674 "placenta blood vessel development"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0048536 "spleen development" evidence=IEA]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=IEA] [GO:0007221 "positive regulation of transcription of
Notch receptor target" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000122 GO:GO:0001569
GO:GO:0048536 InterPro:IPR012921 Pfam:PF07744 GO:GO:0045638
GO:GO:0060412 GO:GO:0060674 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912
GO:GO:0007221 GeneTree:ENSGT00530000063730 OMA:DYLVMIV
EMBL:AAEX03004718 ProteinModelPortal:E2R9C6
Ensembl:ENSCAFT00000031467 Uniprot:E2R9C6
Length = 977
Score = 197 (74.4 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 39/83 (46%), Positives = 58/83 (69%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH-----DLDERVAYVCFRSAEDA 128
YK L +S L + SDE ++D L+ E+K+FGD+S+++SH DERVA+V FR EDA
Sbjct: 169 YKTLKISELGSQLSDEAVEDGLFHEFKRFGDVSVKISHLSGSGSGDERVAFVNFRRPEDA 228
Query: 129 RDAKHSKPRIILYDKVAVVDPVY 151
R AKH++ R++LYD+ ++ VY
Sbjct: 229 RAAKHARGRLVLYDRPLKIEAVY 251
>UNIPROTKB|Q8NDT2 [details] [associations]
symbol:RBM15B "Putative RNA-binding protein 15B"
species:9606 "Homo sapiens" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0019048 "virus-host
interaction" evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0006913
"nucleocytoplasmic transport" evidence=IDA] [GO:0003723 "RNA
binding" evidence=NAS] [GO:0005654 "nucleoplasm" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0019048 GO:GO:0005654
GO:GO:0006355 GO:GO:0008380 GO:GO:0000166 GO:GO:0006397
Gene3D:3.30.70.330 GO:GO:0006351 GO:GO:0003723 InterPro:IPR012921
Pfam:PF07744 GO:GO:0000381 eggNOG:NOG250829 PROSITE:PS50917
Gene3D:2.40.290.10 InterPro:IPR016194 SUPFAM:SSF100939
EMBL:AC092037 InterPro:IPR010912 EMBL:AL831838 EMBL:BC001367
EMBL:AY545557 IPI:IPI00175136 RefSeq:NP_037418.3 UniGene:Hs.118738
UniGene:Hs.731737 ProteinModelPortal:Q8NDT2 SMR:Q8NDT2
IntAct:Q8NDT2 STRING:Q8NDT2 PhosphoSite:Q8NDT2 DMDM:229463030
PaxDb:Q8NDT2 PeptideAtlas:Q8NDT2 PRIDE:Q8NDT2 DNASU:29890
Ensembl:ENST00000323686 Ensembl:ENST00000563281 GeneID:29890
KEGG:hsa:29890 UCSC:uc003dbd.3 CTD:29890 GeneCards:GC03P051428
HGNC:HGNC:24303 HPA:HPA036645 MIM:612602 neXtProt:NX_Q8NDT2
PharmGKB:PA134870079 HOGENOM:HOG000006547 HOVERGEN:HBG058366
InParanoid:Q8NDT2 KO:K13190 OMA:KRDSERN OrthoDB:EOG42RD6Z
GenomeRNAi:29890 NextBio:52441 ArrayExpress:Q8NDT2 Bgee:Q8NDT2
CleanEx:HS_RBM15B Genevestigator:Q8NDT2 GermOnline:ENSG00000179837
Uniprot:Q8NDT2
Length = 890
Score = 184 (69.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 72 PSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERVAYVCFRSAEDARD 130
P YK L +S+L P E ++D L+ ++K+FG++S+RLSH + RVAYV FR +DAR+
Sbjct: 136 PEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDARE 195
Query: 131 AK-HSKPR-IILYDKVAVVDPVY 151
A+ H+ R ++LYD+ V+PVY
Sbjct: 196 ARQHALARQLLLYDRPLKVEPVY 218
Score = 37 (18.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MKRSSSRDTPP 11
MKR S RD+ P
Sbjct: 1 MKRQSERDSSP 11
>UNIPROTKB|F1SIZ8 [details] [associations]
symbol:RBM15B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005654 "nucleoplasm" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676
InterPro:IPR012921 Pfam:PF07744 GO:GO:0000381 PROSITE:PS50917
Gene3D:2.40.290.10 InterPro:IPR016194 SUPFAM:SSF100939
InterPro:IPR010912 KO:K13190 OMA:KRDSERN
GeneTree:ENSGT00530000063730 EMBL:CU633548 RefSeq:XP_003132286.1
Ensembl:ENSSSCT00000012500 GeneID:100519215 KEGG:ssc:100519215
Uniprot:F1SIZ8
Length = 893
Score = 184 (69.8 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 72 PSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERVAYVCFRSAEDARD 130
P YK L +S+L P E ++D L+ ++K+FG++S+RLSH + RVAYV FR +DAR+
Sbjct: 136 PEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDARE 195
Query: 131 AK-HSKPR-IILYDKVAVVDPVY 151
A+ H+ R ++LYD+ V+PVY
Sbjct: 196 ARQHALARQLLLYDRPLKVEPVY 218
Score = 37 (18.1 bits), Expect = 2.5e-14, Sum P(2) = 2.5e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MKRSSSRDTPP 11
MKR S RD+ P
Sbjct: 1 MKRQSERDSSP 11
>UNIPROTKB|E2RPV8 [details] [associations]
symbol:RBM15B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005654 "nucleoplasm" evidence=IEA]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102
SMART:SM00360 GO:GO:0005654 GO:GO:0000166 Gene3D:3.30.70.330
GO:GO:0003676 InterPro:IPR012921 Pfam:PF07744 GO:GO:0000381
PROSITE:PS50917 Gene3D:2.40.290.10 InterPro:IPR016194
SUPFAM:SSF100939 InterPro:IPR010912 KO:K13190 OMA:KRDSERN
GeneTree:ENSGT00530000063730 EMBL:AAEX03012206
RefSeq:XP_003639807.1 Ensembl:ENSCAFT00000016286 GeneID:100855610
KEGG:cfa:100855610 Uniprot:E2RPV8
Length = 898
Score = 184 (69.8 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 72 PSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERVAYVCFRSAEDARD 130
P YK L +S+L P E ++D L+ ++K+FG++S+RLSH + RVAYV FR +DAR+
Sbjct: 136 PEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDARE 195
Query: 131 AK-HSKPR-IILYDKVAVVDPVY 151
A+ H+ R ++LYD+ V+PVY
Sbjct: 196 ARQHALARQLLLYDRPLKVEPVY 218
Score = 37 (18.1 bits), Expect = 2.6e-14, Sum P(2) = 2.6e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MKRSSSRDTPP 11
MKR S RD+ P
Sbjct: 1 MKRQSERDSSP 11
>UNIPROTKB|F6RM04 [details] [associations]
symbol:RBM15B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000504
InterPro:IPR012677 Pfam:PF00076 PROSITE:PS50102 SMART:SM00360
GO:GO:0000166 Gene3D:3.30.70.330 GO:GO:0003676 InterPro:IPR012921
Pfam:PF07744 PROSITE:PS50917 Gene3D:2.40.290.10 InterPro:IPR016194
SUPFAM:SSF100939 InterPro:IPR010912 GeneTree:ENSGT00530000063730
EMBL:DAAA02054396 IPI:IPI00705216 Ensembl:ENSBTAT00000008515
OMA:ISHELDD Uniprot:F6RM04
Length = 940
Score = 184 (69.8 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 38/83 (45%), Positives = 58/83 (69%)
Query: 72 PSYKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSHDLD-ERVAYVCFRSAEDARD 130
P YK L +S+L P E ++D L+ ++K+FG++S+RLSH + RVAYV FR +DAR+
Sbjct: 185 PEYKTLLISSLSPALPAEHLEDRLFHQFKRFGEISLRLSHTPELGRVAYVNFRHPQDARE 244
Query: 131 AK-HSKPR-IILYDKVAVVDPVY 151
A+ H+ R ++LYD+ V+PVY
Sbjct: 245 ARQHALARQLLLYDRPLKVEPVY 267
Score = 37 (18.1 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 7/11 (63%), Positives = 8/11 (72%)
Query: 1 MKRSSSRDTPP 11
MKR S RD+ P
Sbjct: 50 MKRQSERDSSP 60
>UNIPROTKB|F1NRZ4 [details] [associations]
symbol:LOC100859595 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001569 "patterning of blood vessels"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007221
"positive regulation of transcription of Notch receptor target"
evidence=IEA] [GO:0045638 "negative regulation of myeloid cell
differentiation" evidence=IEA] [GO:0048536 "spleen development"
evidence=IEA] [GO:0060412 "ventricular septum morphogenesis"
evidence=IEA] [GO:0060674 "placenta blood vessel development"
evidence=IEA] InterPro:IPR000504 InterPro:IPR012677 Pfam:PF00076
PROSITE:PS50102 SMART:SM00360 GO:GO:0005634 GO:GO:0000166
Gene3D:3.30.70.330 GO:GO:0003676 GO:GO:0000122 InterPro:IPR012921
Pfam:PF07744 GO:GO:0045638 PROSITE:PS50917 Gene3D:2.40.290.10
InterPro:IPR016194 SUPFAM:SSF100939 InterPro:IPR010912
GO:GO:0007221 GeneTree:ENSGT00530000063730 OMA:DYLVMIV
EMBL:AADN02044860 IPI:IPI00578434 Ensembl:ENSGALT00000000546
Uniprot:F1NRZ4
Length = 957
Score = 186 (70.5 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 38/84 (45%), Positives = 56/84 (66%)
Query: 74 YKVLCVSALHPKASDELIKDTLYREYKKFGDLSIRLSH------DLDERVAYVCFRSAED 127
YK L +S L SDE ++D L+ E+K+FGD+S+++S DERVA+V FR ED
Sbjct: 142 YKTLKISELGSALSDEAVEDGLFHEFKRFGDVSVKISRLPPGTGAADERVAFVNFRRPED 201
Query: 128 ARDAKHSKPRIILYDKVAVVDPVY 151
AR AKH++ R++LYD+ ++ VY
Sbjct: 202 ARAAKHARGRLVLYDRPLKIEAVY 225
Score = 35 (17.4 bits), Expect = 3.0e-14, Sum P(2) = 3.0e-14
Identities = 10/31 (32%), Positives = 15/31 (48%)
Query: 7 RDTPPLRNKRTRSSLGRYDDSSDERLSPERG 37
++ P + KR+R G D +S S RG
Sbjct: 6 KERSPAKAKRSRGGGGGKDSASSS--SSTRG 34
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.136 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 249 172 0.00093 108 3 11 22 0.42 32
31 0.48 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 15
No. of states in DFA: 561 (60 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 14.47u 0.08s 14.55t Elapsed: 00:00:03
Total cpu time: 14.47u 0.08s 14.55t Elapsed: 00:00:03
Start: Thu Aug 15 11:45:14 2013 End: Thu Aug 15 11:45:17 2013