Query psy4445
Match_columns 279
No_of_seqs 155 out of 371
Neff 4.2
Searched_HMMs 29240
Date Fri Aug 16 17:14:01 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4445.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4445hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3eln_A Cysteine dioxygenase ty 100.0 1.9E-35 6.5E-40 260.5 14.7 140 75-276 4-143 (200)
2 3eqe_A Putative cystein deoxyg 100.0 9.5E-29 3.3E-33 213.5 10.3 124 85-275 12-137 (171)
3 3uss_A Putative uncharacterize 99.9 1E-26 3.4E-31 207.1 13.4 133 79-276 6-145 (211)
4 2gm6_A Cysteine dioxygenase ty 99.9 8.8E-27 3E-31 206.0 12.5 133 79-276 12-151 (208)
5 3eln_A Cysteine dioxygenase ty 98.6 8.6E-08 2.9E-12 84.2 8.2 127 82-241 29-162 (200)
6 3eqe_A Putative cystein deoxyg 98.5 1.6E-07 5.5E-12 80.9 6.9 121 90-241 32-156 (171)
7 3uss_A Putative uncharacterize 97.9 2.4E-05 8.2E-10 69.5 7.0 82 142-241 77-164 (211)
8 2gm6_A Cysteine dioxygenase ty 97.7 5.7E-05 2E-09 66.5 7.2 102 113-241 61-170 (208)
9 3h8u_A Uncharacterized conserv 94.7 0.097 3.3E-06 40.0 7.1 81 173-269 13-94 (125)
10 1v70_A Probable antibiotics sy 94.0 0.2 7E-06 35.9 7.2 70 183-269 13-82 (105)
11 2q30_A Uncharacterized protein 93.9 0.34 1.2E-05 35.6 8.4 74 180-269 15-89 (110)
12 3lag_A Uncharacterized protein 93.9 0.068 2.3E-06 40.8 4.6 61 195-268 13-73 (98)
13 2fqp_A Hypothetical protein BP 93.8 0.15 5E-06 37.9 6.3 39 196-234 15-53 (97)
14 3h7j_A Bacilysin biosynthesis 92.1 2.1 7.1E-05 37.1 12.1 121 106-233 5-179 (243)
15 4e2g_A Cupin 2 conserved barre 92.0 0.45 1.5E-05 36.2 6.8 46 186-234 30-75 (126)
16 1yhf_A Hypothetical protein SP 91.5 0.59 2E-05 34.8 7.0 68 184-269 26-93 (115)
17 2b8m_A Hypothetical protein MJ 91.1 1.1 3.9E-05 33.6 8.3 79 170-269 2-81 (117)
18 2pfw_A Cupin 2, conserved barr 90.8 0.78 2.7E-05 34.2 7.0 67 185-269 21-87 (116)
19 3i7d_A Sugar phosphate isomera 90.4 0.71 2.4E-05 37.9 7.0 50 185-234 27-79 (163)
20 2gu9_A Tetracenomycin polyketi 90.3 0.74 2.5E-05 33.7 6.4 39 196-234 18-58 (113)
21 3fjs_A Uncharacterized protein 89.4 1.2 4.3E-05 34.0 7.3 47 185-234 24-70 (114)
22 3kgz_A Cupin 2 conserved barre 87.8 0.95 3.3E-05 37.3 6.0 67 186-269 30-97 (156)
23 1lr5_A Auxin binding protein 1 87.7 1.7 5.8E-05 34.9 7.3 66 196-269 38-103 (163)
24 2oa2_A BH2720 protein; 1017534 87.6 2.1 7.1E-05 34.0 7.7 64 196-269 40-103 (148)
25 3ht1_A REMF protein; cupin fol 85.5 1 3.4E-05 34.7 4.7 38 196-234 36-73 (145)
26 2ozi_A Hypothetical protein RP 85.0 0.68 2.3E-05 35.4 3.4 40 194-233 12-51 (98)
27 3rns_A Cupin 2 conserved barre 84.8 1.5 5.2E-05 37.6 5.9 111 119-234 16-187 (227)
28 2f4p_A Hypothetical protein TM 84.6 3.9 0.00013 32.7 7.9 38 196-234 45-82 (147)
29 3ibm_A Cupin 2, conserved barr 84.2 4.4 0.00015 33.3 8.2 56 197-269 54-109 (167)
30 1o4t_A Putative oxalate decarb 84.2 2.3 8E-05 33.2 6.3 69 185-269 39-111 (133)
31 2ozj_A Cupin 2, conserved barr 84.2 3.2 0.00011 30.9 6.8 57 197-270 36-92 (114)
32 3jzv_A Uncharacterized protein 84.1 1.9 6.5E-05 35.9 6.0 67 186-269 39-106 (166)
33 3l2h_A Putative sugar phosphat 83.9 2.6 8.8E-05 33.7 6.5 39 196-234 43-82 (162)
34 1dgw_A Canavalin; duplicated s 83.7 1.3 4.6E-05 36.9 4.9 59 198-269 40-98 (178)
35 3h7j_A Bacilysin biosynthesis 82.5 2.1 7.1E-05 37.1 5.8 62 169-234 6-68 (243)
36 3cew_A Uncharacterized cupin p 82.2 2.9 9.9E-05 31.8 6.0 39 196-234 23-62 (125)
37 2bnm_A Epoxidase; oxidoreducta 82.0 5.8 0.0002 32.5 8.1 73 185-270 101-178 (198)
38 1fi2_A Oxalate oxidase, germin 80.9 4.7 0.00016 33.9 7.4 66 197-270 70-135 (201)
39 3rns_A Cupin 2 conserved barre 80.3 5.3 0.00018 34.2 7.6 53 180-235 19-72 (227)
40 1vj2_A Novel manganese-contain 80.1 2.1 7.3E-05 32.9 4.5 57 196-269 45-101 (126)
41 3o14_A Anti-ecfsigma factor, C 80.0 4.5 0.00015 35.5 7.1 34 199-234 146-179 (223)
42 3ebr_A Uncharacterized RMLC-li 78.6 3.3 0.00011 34.5 5.5 47 185-232 27-74 (159)
43 1fxz_A Glycinin G1; proglycini 78.4 3.7 0.00013 40.1 6.6 63 198-270 337-399 (476)
44 2d5f_A Glycinin A3B4 subunit; 77.9 3.9 0.00013 40.1 6.7 62 199-270 367-428 (493)
45 2o1q_A Putative acetyl/propion 77.7 1.9 6.5E-05 34.9 3.8 48 185-233 29-77 (145)
46 3c3v_A Arachin ARAH3 isoform; 76.4 4.3 0.00015 40.2 6.5 63 198-270 371-433 (510)
47 1y9q_A Transcriptional regulat 75.7 8.4 0.00029 31.5 7.2 69 185-270 88-160 (192)
48 1y3t_A Hypothetical protein YX 75.6 6.7 0.00023 34.6 7.0 58 196-269 43-100 (337)
49 2q1z_B Anti-sigma factor CHRR, 75.6 3.1 0.00011 35.5 4.7 45 186-232 113-157 (195)
50 3cjx_A Protein of unknown func 75.0 3.9 0.00013 34.4 5.0 47 186-233 29-76 (165)
51 1j58_A YVRK protein; cupin, de 74.9 6.6 0.00022 35.9 7.0 61 198-269 256-316 (385)
52 2o8q_A Hypothetical protein; c 74.7 6 0.00021 30.2 5.7 39 196-234 38-78 (134)
53 2vqa_A SLL1358 protein, MNCA; 73.9 8.8 0.0003 34.5 7.5 61 198-269 233-293 (361)
54 1uij_A Beta subunit of beta co 73.2 3.3 0.00011 39.5 4.7 59 197-268 47-105 (416)
55 3fz3_A Prunin; TREE NUT allerg 73.0 6.2 0.00021 39.4 6.7 63 198-270 393-455 (531)
56 2e9q_A 11S globulin subunit be 71.5 7.3 0.00025 37.9 6.7 64 198-271 321-384 (459)
57 4i4a_A Similar to unknown prot 71.3 11 0.00037 28.4 6.4 57 196-269 31-87 (128)
58 2ea7_A 7S globulin-1; beta bar 70.8 4 0.00014 39.3 4.6 40 197-237 59-98 (434)
59 4e2q_A Ureidoglycine aminohydr 69.4 7.2 0.00025 35.4 5.8 59 196-270 67-125 (266)
60 4h7l_A Uncharacterized protein 69.2 5.4 0.00019 33.7 4.6 54 180-234 27-82 (157)
61 3es1_A Cupin 2, conserved barr 68.8 5.1 0.00018 34.0 4.4 39 195-234 75-113 (172)
62 2xlg_A SLL1785 protein, CUCA; 68.4 9.2 0.00031 33.8 6.2 40 196-235 40-79 (239)
63 2pyt_A Ethanolamine utilizatio 68.0 9.4 0.00032 30.5 5.6 68 184-270 42-109 (133)
64 2vqa_A SLL1358 protein, MNCA; 67.8 14 0.00049 33.1 7.4 62 197-269 50-111 (361)
65 3lwc_A Uncharacterized protein 66.5 18 0.0006 28.2 6.8 67 186-270 26-93 (119)
66 3qac_A 11S globulin SEED stora 65.0 12 0.00041 36.7 6.7 63 199-271 323-385 (465)
67 1sfn_A Conserved hypothetical 65.0 20 0.00069 31.0 7.6 68 185-269 149-219 (246)
68 3ksc_A LEGA class, prolegumin; 64.6 11 0.00039 37.1 6.5 63 199-271 358-420 (496)
69 3kgl_A Cruciferin; 11S SEED gl 64.5 10 0.00035 37.1 6.2 64 198-271 322-385 (466)
70 1rc6_A Hypothetical protein YL 63.8 12 0.0004 32.6 5.8 58 196-269 176-233 (261)
71 2cav_A Protein (canavalin); vi 63.8 6.2 0.00021 38.1 4.4 60 197-269 84-143 (445)
72 1sef_A Conserved hypothetical 63.5 22 0.00074 31.2 7.6 38 196-234 179-217 (274)
73 1x82_A Glucose-6-phosphate iso 62.4 23 0.00078 29.6 7.2 64 196-270 64-135 (190)
74 3h8u_A Uncharacterized conserv 61.7 6 0.0002 29.8 3.2 52 118-170 17-71 (125)
75 3o14_A Anti-ecfsigma factor, C 61.5 9 0.00031 33.6 4.7 48 185-233 27-76 (223)
76 2y0o_A Probable D-lyxose ketol 60.0 25 0.00086 30.1 7.1 68 198-268 52-133 (175)
77 2cav_A Protein (canavalin); vi 58.5 15 0.00051 35.4 6.1 71 198-269 280-351 (445)
78 1sq4_A GLXB, glyoxylate-induce 57.8 10 0.00036 33.7 4.5 39 196-235 65-105 (278)
79 3d82_A Cupin 2, conserved barr 56.3 26 0.00089 24.8 5.7 53 199-269 31-83 (102)
80 2opk_A Hypothetical protein; p 54.7 33 0.0011 25.9 6.4 59 196-270 28-89 (112)
81 2i45_A Hypothetical protein; n 54.7 16 0.00056 26.7 4.5 52 202-269 31-82 (107)
82 1j58_A YVRK protein; cupin, de 54.5 25 0.00085 32.0 6.6 62 197-270 77-138 (385)
83 1y9q_A Transcriptional regulat 53.7 86 0.003 25.2 9.6 118 99-217 51-189 (192)
84 2q30_A Uncharacterized protein 53.6 17 0.00058 26.2 4.4 35 126-161 19-53 (110)
85 3bb6_A Uncharacterized protein 53.5 19 0.00063 29.7 5.0 32 207-238 22-57 (127)
86 1v70_A Probable antibiotics sy 51.9 13 0.00043 26.2 3.4 36 126-162 14-49 (105)
87 4e2g_A Cupin 2 conserved barre 51.7 51 0.0018 24.4 7.0 42 128-171 30-73 (126)
88 1rc6_A Hypothetical protein YL 51.1 20 0.00068 31.1 5.1 40 196-235 56-96 (261)
89 4b29_A Dimethylsulfoniopropion 50.7 24 0.00084 31.3 5.7 36 196-232 129-164 (217)
90 3fjs_A Uncharacterized protein 50.7 37 0.0013 25.6 6.1 36 129-166 26-61 (114)
91 2ea7_A 7S globulin-1; beta bar 49.9 26 0.00089 33.6 6.1 72 199-271 266-340 (434)
92 2phl_A Phaseolin; plant SEED s 48.3 22 0.00076 33.9 5.3 71 197-271 237-307 (397)
93 3bu7_A Gentisate 1,2-dioxygena 48.2 18 0.00061 34.6 4.7 33 198-231 293-325 (394)
94 1y3t_A Hypothetical protein YX 46.0 62 0.0021 28.3 7.6 51 204-270 222-273 (337)
95 1uij_A Beta subunit of beta co 45.2 29 0.001 33.0 5.7 72 199-270 249-323 (416)
96 3ebr_A Uncharacterized RMLC-li 44.3 23 0.00077 29.3 4.2 51 114-165 15-66 (159)
97 1sef_A Conserved hypothetical 43.2 30 0.001 30.3 5.1 40 196-235 59-99 (274)
98 4axo_A EUTQ, ethanolamine util 40.6 63 0.0022 26.7 6.4 66 185-269 51-117 (151)
99 2fqp_A Hypothetical protein BP 39.8 26 0.0009 25.3 3.5 26 138-163 15-40 (97)
100 3nr5_A MAF1, repressor of RNA 38.6 18 0.00063 30.9 2.8 33 32-94 31-63 (164)
101 4e2q_A Ureidoglycine aminohydr 37.8 57 0.0019 29.5 6.1 57 196-269 183-240 (266)
102 2d40_A Z3393, putative gentisa 37.7 69 0.0024 29.5 6.8 53 199-268 268-320 (354)
103 1dgw_X Canavalin; duplicated s 37.1 29 0.00099 25.7 3.4 37 198-234 35-71 (79)
104 1yhf_A Hypothetical protein SP 36.7 22 0.00076 26.0 2.7 49 114-166 17-65 (115)
105 2d40_A Z3393, putative gentisa 36.5 46 0.0016 30.6 5.4 35 197-232 98-132 (354)
106 1juh_A Quercetin 2,3-dioxygena 36.4 69 0.0024 29.3 6.5 62 196-269 45-109 (350)
107 3bcw_A Uncharacterized protein 36.2 50 0.0017 25.9 4.9 62 191-269 41-102 (123)
108 3bu7_A Gentisate 1,2-dioxygena 34.9 45 0.0015 31.8 5.1 35 196-231 120-154 (394)
109 1sq4_A GLXB, glyoxylate-induce 34.0 72 0.0025 28.2 6.1 45 188-233 179-225 (278)
110 1sfn_A Conserved hypothetical 32.5 1.2E+02 0.0042 26.0 7.2 56 196-270 47-102 (246)
111 2q1z_B Anti-sigma factor CHRR, 32.4 1.3E+02 0.0046 25.1 7.3 53 107-164 93-148 (195)
112 3d0j_A Uncharacterized protein 28.7 1.2E+02 0.0041 25.2 6.1 51 182-235 11-65 (140)
113 3ht1_A REMF protein; cupin fol 27.3 53 0.0018 24.8 3.5 50 117-166 12-64 (145)
114 3s7i_A Allergen ARA H 1, clone 26.3 56 0.0019 31.3 4.2 40 197-237 42-81 (418)
115 3kmh_A D-lyxose isomerase; cup 26.2 1.1E+02 0.0038 27.8 5.9 44 198-241 105-149 (246)
116 2pfw_A Cupin 2, conserved barr 26.2 41 0.0014 24.5 2.6 42 128-170 22-65 (116)
117 3nw4_A Gentisate 1,2-dioxygena 25.6 68 0.0023 30.4 4.6 34 197-231 101-134 (368)
118 3lag_A Uncharacterized protein 24.5 80 0.0027 23.4 4.0 30 131-162 9-38 (98)
119 3bal_A Acetylacetone-cleaving 24.5 47 0.0016 27.7 3.0 50 186-236 32-82 (153)
120 2xdp_A Lysine-specific demethy 24.1 1.6E+02 0.0054 24.0 5.9 81 167-262 28-116 (123)
121 3cjx_A Protein of unknown func 24.0 81 0.0028 26.2 4.3 58 114-171 16-75 (165)
122 3dl3_A Tellurite resistance pr 23.8 1E+02 0.0035 24.9 4.7 44 218-269 36-79 (119)
123 2qqr_A JMJC domain-containing 21.9 1.6E+02 0.0056 23.7 5.5 80 168-262 28-115 (118)
124 2b8m_A Hypothetical protein MJ 20.8 1.4E+02 0.0049 21.7 4.8 37 128-166 16-52 (117)
125 1zvf_A 3-hydroxyanthranilate 3 20.3 95 0.0033 26.8 4.1 36 201-237 36-71 (176)
126 2vpv_A Protein MIF2, MIF2P; nu 20.1 1.1E+02 0.0038 25.6 4.4 57 196-269 85-143 (166)
127 3es1_A Cupin 2, conserved barr 20.0 73 0.0025 26.8 3.3 29 138-166 76-104 (172)
No 1
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=100.00 E-value=1.9e-35 Score=260.54 Aligned_cols=140 Identities=50% Similarity=0.934 Sum_probs=128.8
Q ss_pred CCCCCcCcHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcCccccccccccCcccceEeeecCCCCceeEEEEeecCCCCC
Q psy4445 75 DNLPQLNCLADLVEELHRIFSDDHVNVDYVKFVMKSYKSNPMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGS 154 (279)
Q Consensus 75 ~~~~~~~~L~~lV~~L~~~~~sd~vd~~~v~~ll~~y~sn~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S 154 (279)
..++.+.+|++||++|+++|+++++++++++.+|++|.+++++|.+|++||+.+|+||||++++++|+||++
T Consensus 4 ~~~~~~~~l~~li~~l~~~~~~~~~~~~~l~~ll~~l~~~~~~W~~~~~~d~~~y~R~ll~~~~~~~~l~ll-------- 75 (200)
T 3eln_A 4 TELLKPRTLADLIRILHELFAGDEVNVEEVQAVLEAYESNPAEWALYAKFDQYRYTRNLVDQGNGKFNLMIL-------- 75 (200)
T ss_dssp CCCCCCSSHHHHHHHHHHHTSSSSCCHHHHHHHHHHSCCCHHHHGGGCCCCSSSCEEEEEECGGGTCEEEEE--------
T ss_pred cccCChHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHcCHHHHHhhhccCccceEEEeeecCCCceEEEEE--------
Confidence 456788999999999999999999999999999999999999999999999999999999987777777776
Q ss_pred ccccCCCCceeeeecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 155 SVHDHADAHCFMTNETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 155 ~IHdH~~ahC~~~g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
||.|||.||||||.++||+|+||+|+++|+
T Consensus 76 --------------------------------------------------~W~PGq~SpiHDH~~s~g~i~VL~G~l~e~ 105 (200)
T 3eln_A 76 --------------------------------------------------CWGEGHGSSIHDHTDSHCFLKLLQGNLKET 105 (200)
T ss_dssp --------------------------------------------------EECTTCBCCEECCTTCEEEEEEEESCEEEE
T ss_pred --------------------------------------------------EECCCCcCCCccCCCceEEEEEEeeeEEEE
Confidence 899999999999999999999999999999
Q ss_pred eecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCCCccCC
Q psy4445 235 RYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNSSCKGG 276 (279)
Q Consensus 235 rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG~~k~~ 276 (279)
+|.+|+++ ..+|+.+++.++.+|+|.||+|.+|+|+++
T Consensus 106 ~y~~~~~~----~~~l~~~~~~~l~~G~v~~~~~~~giH~V~ 143 (200)
T 3eln_A 106 LFDWPDKK----SNEMIKKSERTLRENQCAYINDSIGLHRVE 143 (200)
T ss_dssp EECCCCSS----CCCCCEEEEEEECTTCEEEECTTTCEEEEE
T ss_pred EeecCCCC----cccccccceEEeCCCCEEEecCCCcEEEEE
Confidence 99998764 347899999999999999999999999875
No 2
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=99.95 E-value=9.5e-29 Score=213.52 Aligned_cols=124 Identities=20% Similarity=0.279 Sum_probs=109.4
Q ss_pred HHHHHHHHHhcC-CCCCHHHHHHHHHHhhcCcccccccc-ccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCC
Q psy4445 85 DLVEELHRIFSD-DHVNVDYVKFVMKSYKSNPMEWRKYS-KFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADA 162 (279)
Q Consensus 85 ~lV~~L~~~~~s-d~vd~~~v~~ll~~y~sn~~dW~~ya-~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~a 162 (279)
+|-+.|+++|++ +++|+++|+.+|++|.+++++|++|+ .+++.+||||||++ +++|+|+++
T Consensus 12 ~~~~~~~~~~~~l~~~~~~~l~~~l~~~~~~~~~w~~~~~~~~~~~YtR~ll~~-~~~~~v~~l---------------- 74 (171)
T 3eqe_A 12 ELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYR-NNELEIIVI---------------- 74 (171)
T ss_dssp CHHHHHHHHHTTCSSCCHHHHHHHHTTSTTHHHHHTTSCCCCSSSSSEEEEEEE-CSSCEEEEE----------------
T ss_pred HHHHHHHHHhcCCCCCCHHHHHHHHHHhcCCHHHHhhcccCCCCCcEEEEEEec-CCCeEEEEE----------------
Confidence 678899999999 99999999999999999999999999 57778899999986 555555555
Q ss_pred ceeeeecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCC
Q psy4445 163 HCFMTNETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTD 242 (279)
Q Consensus 163 hC~~~g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~ 242 (279)
||.|||.||||||.++||+|+||+|+++|++|.++.+
T Consensus 75 ------------------------------------------~W~PGq~S~iHdH~~s~~~~~VL~G~l~e~~y~~~~~- 111 (171)
T 3eqe_A 75 ------------------------------------------NIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGE- 111 (171)
T ss_dssp ------------------------------------------EECTTCBCCEECCTTCEEEEEEEESEEEEEEEEECSS-
T ss_pred ------------------------------------------EECCCCCcccccCCCceEEEEEEeeeEEEEEeecCCC-
Confidence 9999999999999999999999999999999998532
Q ss_pred CCCCCCcceeecceeecCCCeeEEcCCCCCccC
Q psy4445 243 EDGEEKPLQVIGKSPLKLNEVCYINGKNSSCKG 275 (279)
Q Consensus 243 ~~g~~~pL~~~~~~~l~~geVtYIsD~iG~~k~ 275 (279)
.++.+++.++.+|+| |+.|..++|++
T Consensus 112 ------~~~~~~~~~l~~G~~-~~~~~~~iH~V 137 (171)
T 3eqe_A 112 ------HAELSNSYFVHEGEC-LISTKGLIHKM 137 (171)
T ss_dssp ------SEEEEEEEEEETTCE-EEECTTCEEEE
T ss_pred ------ceeecceEEeCCCcE-EEeCCCCEEEE
Confidence 245678889999999 89999999986
No 3
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=99.94 E-value=1e-26 Score=207.14 Aligned_cols=133 Identities=19% Similarity=0.354 Sum_probs=111.6
Q ss_pred CcCcHHHHHHHHHHHhcCCCC---CHHHHHHHHHHhhcCcccccc--ccccCcccceEeeecC-CCCceeEEEEeecCCC
Q psy4445 79 QLNCLADLVEELHRIFSDDHV---NVDYVKFVMKSYKSNPMEWRK--YSKFDKYKYTRNLVDA-GNDKFNLMILCWGEGH 152 (279)
Q Consensus 79 ~~~~L~~lV~~L~~~~~sd~v---d~~~v~~ll~~y~sn~~dW~~--ya~~d~~rYtRNLV~~-~ngk~nL~~LcW~pGq 152 (279)
.+..|++||++|+++++.... .+++|+.+|++|.++ ++|.+ |+.+++.+|+||||++ ++++|+|++
T Consensus 6 ~~~~l~~fi~~l~~~l~~~~~~~~~l~~l~~ll~~l~~~-~~wl~~~~~~p~~~~y~r~lL~~dp~~~f~v~~------- 77 (211)
T 3uss_A 6 RLDRLRQFIGELATLLDSRPDESTLLAQAHPLLAELVHQ-DDWLPEDCARPDPQRYQQYLLHVDSRQRFSVVS------- 77 (211)
T ss_dssp CHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHTSS-CCCCCGGGGCCCSSSCEEEEEEECTTSSCEEEE-------
T ss_pred cHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHcC-ccccchhhcCCCCCceeEEEEecCCCCCEEEEE-------
Confidence 467899999999999976543 389999999999998 58998 5566777899999985 445555555
Q ss_pred CCccccCCCCceeeeecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 153 GSSVHDHADAHCFMTNETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 153 ~S~IHdH~~ahC~~~g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
|||.|||.||||||. +||+|+||+|+++
T Consensus 78 ---------------------------------------------------l~W~PGq~spiHDH~-swg~~~Vl~G~l~ 105 (211)
T 3uss_A 78 ---------------------------------------------------FVWGPGQITPVHDHR-VWGLIGMLRGAEY 105 (211)
T ss_dssp ---------------------------------------------------EEECTTCBCCSBCCS-SCEEEEEEESCEE
T ss_pred ---------------------------------------------------EEECCCCcCCCCCCC-eeEEEEeeeceEE
Confidence 599999999999999 8999999999999
Q ss_pred EEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC-CccCC
Q psy4445 233 ETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS-SCKGG 276 (279)
Q Consensus 233 E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG-~~k~~ 276 (279)
|++|.+++++ .++....+.++.+|+|.|+.|.+| +|++.
T Consensus 106 e~~y~~~~~g-----~~~~~~~~~~l~~G~v~~~~p~~g~IH~V~ 145 (211)
T 3uss_A 106 SQPYAFDAGG-----RPHPSGARRRLEPGEVEALSPRIGDVHQVS 145 (211)
T ss_dssp EEEEEECTTS-----CEEECSCCEEECTTCEEEEBTTTBCCEEEE
T ss_pred EEEeeeCCCC-----CcccccceEEecCCCEEEECCCCCCEEEEc
Confidence 9999998763 345555668999999999999998 99865
No 4
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=99.94 E-value=8.8e-27 Score=206.02 Aligned_cols=133 Identities=14% Similarity=0.298 Sum_probs=114.6
Q ss_pred CcCcHHHHHHHHHHHhcCCCCC---HHHHHHHHHHhhcCcccccc--ccccCcccceEeeecC-CCCceeEEEEeecCCC
Q psy4445 79 QLNCLADLVEELHRIFSDDHVN---VDYVKFVMKSYKSNPMEWRK--YSKFDKYKYTRNLVDA-GNDKFNLMILCWGEGH 152 (279)
Q Consensus 79 ~~~~L~~lV~~L~~~~~sd~vd---~~~v~~ll~~y~sn~~dW~~--ya~~d~~rYtRNLV~~-~ngk~nL~~LcW~pGq 152 (279)
....|++||++|++++++...+ ++.|+.+|++|.++ .+|.+ |+.+++.+|+|+||++ ++++|+|++
T Consensus 12 ~~~~l~~fi~~l~~~~~~~~~~~~~l~~l~~ll~~l~~~-~~wl~~~~~~~~~~~y~r~lL~~dp~~~~~v~~------- 83 (208)
T 2gm6_A 12 SLAPLREFITGLSALLDEQPGEARILREGGALLARLVAR-DDWLPDAFAQPHPEYYQQMLLHCDSAERFSIVS------- 83 (208)
T ss_dssp CCHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHS-CCSCCGGGSCCCSSSCEEEEEEECTTSSCEEEE-------
T ss_pred CcHHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHhcC-chhhhhhhcCCCccceeEEEeecCCCCCEEEEE-------
Confidence 3578999999999999875544 48889999999998 78994 6788888899999987 345555555
Q ss_pred CCccccCCCCceeeeecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 153 GSSVHDHADAHCFMTNETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 153 ~S~IHdH~~ahC~~~g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
+||.|||.||||||.+ ||+++||+|+++
T Consensus 84 ---------------------------------------------------l~w~PGq~spiHdH~~-~~~~~VL~G~l~ 111 (208)
T 2gm6_A 84 ---------------------------------------------------FVWGPGQRTPIHDHTV-WGLIGMLRGAEY 111 (208)
T ss_dssp ---------------------------------------------------EEECTTCBCCSBCCSS-CEEEEEEESCEE
T ss_pred ---------------------------------------------------EEeCCCcccCcccCCc-ceEEEEecccEE
Confidence 5999999999999998 999999999999
Q ss_pred EEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC-CccCC
Q psy4445 233 ETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS-SCKGG 276 (279)
Q Consensus 233 E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG-~~k~~ 276 (279)
|++|.++++ +.+++..++.++.+|+|.|+.|++| +|++.
T Consensus 112 e~~y~~~~~-----g~~l~~~~~~~l~~G~v~~~~~~~g~iH~V~ 151 (208)
T 2gm6_A 112 SQPFVLDGS-----GRPVLHGEPTRLEPGHVEAVSPTVGDIHRVH 151 (208)
T ss_dssp EEEEEECTT-----SCEEECSCCEEECTTCEEEEBTTTBCCEEEE
T ss_pred EEEeecCCC-----CccccccceEEeCCCCEEEECCCCCCeEEec
Confidence 999999876 3578888999999999999999999 99875
No 5
>3eln_A Cysteine dioxygenase type 1; peroxysulfenate, non-heme dioxygenases, Fe2+ metalloenzyme, taurine, thioether, iron, metal- binding; 1.42A {Rattus norvegicus} SCOP: b.82.1.19 PDB: 2gh2_A 2b5h_A 2atf_A* 2q4s_A 2ic1_A
Probab=98.61 E-value=8.6e-08 Score=84.23 Aligned_cols=127 Identities=20% Similarity=0.304 Sum_probs=75.7
Q ss_pred cHHHHHHHHHHHhcCCCCCHHHHHHHHHHhh-cCccccccccccCc-ccceEeeecCCCCceeEEEEeecCCCCCccccC
Q psy4445 82 CLADLVEELHRIFSDDHVNVDYVKFVMKSYK-SNPMEWRKYSKFDK-YKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDH 159 (279)
Q Consensus 82 ~L~~lV~~L~~~~~sd~vd~~~v~~ll~~y~-sn~~dW~~ya~~d~-~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH 159 (279)
.+.+ |+.|.+.+.+ +++.+.. |. -++..|.++...++ .+|.-- -|.|. |||.||||||
T Consensus 29 ~~~~-l~~ll~~l~~---~~~~W~~----~~~~d~~~y~R~ll~~~~~~~~l~---------ll~W~---PGq~SpiHDH 88 (200)
T 3eln_A 29 NVEE-VQAVLEAYES---NPAEWAL----YAKFDQYRYTRNLVDQGNGKFNLM---------ILCWG---EGHGSSIHDH 88 (200)
T ss_dssp CHHH-HHHHHHHSCC---CHHHHGG----GCCCCSSSCEEEEEECGGGTCEEE---------EEEEC---TTCBCCEECC
T ss_pred CHHH-HHHHHHHHHc---CHHHHHh----hhccCccceEEEeeecCCCceEEE---------EEEEC---CCCcCCCccC
Confidence 3444 4455555554 3444443 33 35555666554442 345433 34677 9999999999
Q ss_pred CCCceeee---ecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEee--cceEEEE
Q psy4445 160 ADAHCFMT---NETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKML--DGCLTET 234 (279)
Q Consensus 160 ~~ahC~~~---g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL--~G~l~E~ 234 (279)
+++||+|+ |+++|.+|.++.....+-.-++. ..-.||+...+-+-.+-|-+.+.- +-++..+
T Consensus 89 ~~s~g~i~VL~G~l~e~~y~~~~~~~~~l~~~~~-------------~~l~~G~v~~~~~~~giH~V~N~s~~~~avSlH 155 (200)
T 3eln_A 89 TDSHCFLKLLQGNLKETLFDWPDKKSNEMIKKSE-------------RTLRENQCAYINDSIGLHRVENVSHTEPAVSLH 155 (200)
T ss_dssp TTCEEEEEEEESCEEEEEECCCCSSCCCCCEEEE-------------EEECTTCEEEECTTTCEEEEECCCSSCCEEEEE
T ss_pred CCceEEEEEEeeeEEEEEeecCCCCcccccccce-------------EEeCCCCEEEecCCCcEEEEECCCCCCCEEEEE
Confidence 99999997 99999999987543211001111 133567765553333345555444 3589999
Q ss_pred eecCCCC
Q psy4445 235 RYAWPQT 241 (279)
Q Consensus 235 rY~~p~~ 241 (279)
.|..|-.
T Consensus 156 vY~pp~~ 162 (200)
T 3eln_A 156 LYSPPFD 162 (200)
T ss_dssp EEESCCS
T ss_pred eCCCCcc
Confidence 9998754
No 6
>3eqe_A Putative cystein deoxygenase; YUBC, SR112, NESG, structural genomics, PSI-2, protein structure initiative; 2.82A {Bacillus subtilis}
Probab=98.51 E-value=1.6e-07 Score=80.87 Aligned_cols=121 Identities=12% Similarity=0.159 Sum_probs=69.3
Q ss_pred HHHHhcCCCCCHHHHHHHHHHhhcCccccccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCCceeee--
Q psy4445 90 LHRIFSDDHVNVDYVKFVMKSYKSNPMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMT-- 167 (279)
Q Consensus 90 L~~~~~sd~vd~~~v~~ll~~y~sn~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~~-- 167 (279)
|++++.+-.++.+.+.... ..-++....++......+|+ |+ -+.|. |||.||||||+++||+|+
T Consensus 32 l~~~l~~~~~~~~~w~~~~--~~~~~~~YtR~ll~~~~~~~--v~-------~l~W~---PGq~S~iHdH~~s~~~~~VL 97 (171)
T 3eqe_A 32 LATSLKQIPNAAKLSQPYI--KEPDQYAYGRNAIYRNNELE--II-------VINIP---PNKETTVHDHGQSIGCAMVL 97 (171)
T ss_dssp HHHHHTTSTTHHHHHTTSC--CCCSSSSSEEEEEEECSSCE--EE-------EEEEC---TTCBCCEECCTTCEEEEEEE
T ss_pred HHHHHHHhcCCHHHHhhcc--cCCCCCcEEEEEEecCCCeE--EE-------EEEEC---CCCCcccccCCCceEEEEEE
Confidence 3344444446666665433 11222334454444344563 33 45677 999999999999999996
Q ss_pred -ecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEee-cceEEEEeecCCCC
Q psy4445 168 -NETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKML-DGCLTETRYAWPQT 241 (279)
Q Consensus 168 -g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL-~G~l~E~rY~~p~~ 241 (279)
|+++|.+|.++..... .++..+ =.+|+. .+-+-.+.|-+.+.- +-++..+.|.+|-.
T Consensus 98 ~G~l~e~~y~~~~~~~~---~~~~~~-------------l~~G~~-~~~~~~~iH~V~N~~~~~aVSlHvY~pp~~ 156 (171)
T 3eqe_A 98 EGKLLNSIYRSTGEHAE---LSNSYF-------------VHEGEC-LISTKGLIHKMSNPTSERMVSLHVYSPPLE 156 (171)
T ss_dssp ESEEEEEEEEECSSSEE---EEEEEE-------------EETTCE-EEECTTCEEEEECCSSSCEEEEEEEESCCC
T ss_pred eeeEEEEEeecCCCcee---ecceEE-------------eCCCcE-EEeCCCCEEEEECCCCCCEEEEEEeCCCcc
Confidence 9999999986533211 111211 134443 222223334443333 34889999998865
No 7
>3uss_A Putative uncharacterized protein; cupin, three histidine, non-heme iron, cysteine catabolism, oxidoreductase; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.19
Probab=97.86 E-value=2.4e-05 Score=69.50 Aligned_cols=82 Identities=11% Similarity=0.054 Sum_probs=53.6
Q ss_pred eEEEEeecCCCCCccccCCCCceeee---ecccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCC
Q psy4445 142 NLMILCWGEGHGSSVHDHADAHCFMT---NETKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHA 218 (279)
Q Consensus 142 nL~~LcW~pGq~S~IHdH~~ahC~~~---g~~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~ 218 (279)
.|+|. |||.||||||+ +||+|+ |+++|.+|.+++... ...-.+ ...-.+|+...+-+..
T Consensus 77 ~l~W~---PGq~spiHDH~-swg~~~Vl~G~l~e~~y~~~~~g~-~~~~~~-------------~~~l~~G~v~~~~p~~ 138 (211)
T 3uss_A 77 SFVWG---PGQITPVHDHR-VWGLIGMLRGAEYSQPYAFDAGGR-PHPSGA-------------RRRLEPGEVEALSPRI 138 (211)
T ss_dssp EEEEC---TTCBCCSBCCS-SCEEEEEEESCEEEEEEEECTTSC-EEECSC-------------CEEECTTCEEEEBTTT
T ss_pred EEEEC---CCCcCCCCCCC-eeEEEEeeeceEEEEEeeeCCCCC-cccccc-------------eEEecCCCEEEECCCC
Confidence 35665 99999999999 899997 999999999875321 000000 0123566666655543
Q ss_pred C-cceeeEee--cceEEEEeecCCCC
Q psy4445 219 D-AHCFMKML--DGCLTETRYAWPQT 241 (279)
Q Consensus 219 g-shC~~kVL--~G~l~E~rY~~p~~ 241 (279)
+ -|-+.+.. +-++..+.|..|-.
T Consensus 139 g~IH~V~N~~~d~~avSLHvYg~pl~ 164 (211)
T 3uss_A 139 GDVHQVSNAFSDRTSISIHVYGANIG 164 (211)
T ss_dssp BCCEEEEESCSSSCEEEEEEESSCGG
T ss_pred CCEEEEccCCCCCCEEEEEEcCCCCC
Confidence 2 45555554 23789999988754
No 8
>2gm6_A Cysteine dioxygenase type I; structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2, oxidoreductase; 1.84A {Ralstonia eutropha} SCOP: b.82.1.19
Probab=97.73 E-value=5.7e-05 Score=66.46 Aligned_cols=102 Identities=11% Similarity=0.080 Sum_probs=63.3
Q ss_pred cCccccccccccC-c-ccceEeeecCCCCceeEEEEeecCCCCCccccCCCCceeee---ecccceeecccCcccccccc
Q psy4445 113 SNPMEWRKYSKFD-K-YKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMT---NETKKSLYTSSLNKVSCTLY 187 (279)
Q Consensus 113 sn~~dW~~ya~~d-~-~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~~---g~~~e~~y~~~~nk~s~t~Y 187 (279)
.++..+.++..+. + .+|+.-++ .|. |||.||||||++ ||+|+ |+++|.+|.++... ++-.-
T Consensus 61 ~~~~~y~r~lL~~dp~~~~~v~~l---------~w~---PGq~spiHdH~~-~~~~~VL~G~l~e~~y~~~~~g-~~l~~ 126 (208)
T 2gm6_A 61 PHPEYYQQMLLHCDSAERFSIVSF---------VWG---PGQRTPIHDHTV-WGLIGMLRGAEYSQPFVLDGSG-RPVLH 126 (208)
T ss_dssp CCSSSCEEEEEEECTTSSCEEEEE---------EEC---TTCBCCSBCCSS-CEEEEEEESCEEEEEEEECTTS-CEEEC
T ss_pred CCccceeEEEeecCCCCCEEEEEE---------EeC---CCcccCcccCCc-ceEEEEecccEEEEEeecCCCC-ccccc
Confidence 3555666666443 4 45766555 454 999999999998 99996 99999999876532 00000
Q ss_pred eeeeeecCCCcceeEEEeecCCCccccccCCC-cceeeEee--cceEEEEeecCCCC
Q psy4445 188 TRNLVDAGNDKFNLMILCWGEGHGSSVHDHAD-AHCFMKML--DGCLTETRYAWPQT 241 (279)
Q Consensus 188 TRnlV~~i~~~~elvll~W~pGQ~SpIHDH~g-shC~~kVL--~G~l~E~rY~~p~~ 241 (279)
.+. ..-.||+...+=+..+ -|-+.+.. +.++..+.|..|-.
T Consensus 127 ~~~-------------~~l~~G~v~~~~~~~g~iH~V~N~~~~~~avsLHvY~~~~~ 170 (208)
T 2gm6_A 127 GEP-------------TRLEPGHVEAVSPTVGDIHRVHNAYDDRVSISIHVYGANIG 170 (208)
T ss_dssp SCC-------------EEECTTCEEEEBTTTBCCEEEEESCSSSCEEEEEEESSCGG
T ss_pred cce-------------EEeCCCCEEEECCCCCCeEEeccCCCCCcEEEEEEEcCCCC
Confidence 000 1235666655555222 35555553 34888888977643
No 9
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=94.68 E-value=0.097 Score=40.05 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=54.0
Q ss_pred eeecccC-cccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcce
Q psy4445 173 SLYTSSL-NKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQ 251 (279)
Q Consensus 173 ~~y~~~~-nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~ 251 (279)
.+|...+ .+.......|..+.. .+.+.+..+...||+..+.|.|.+..=++.||+|+++-.. . ++
T Consensus 13 ~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~~~~~---~-~~--------- 78 (125)
T 3h8u_A 13 RIFSVDEYVRPSNGEPIRSVVLE-TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEAEYHQ---G-NG--------- 78 (125)
T ss_dssp CEEEHHHHCCCCSSSCCCEEEEE-CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEEEEEC---S-TT---------
T ss_pred ceEEhhHhhccCCCCcEEEEEEc-CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEEEEEE---C-CC---------
Confidence 4555543 334444555555543 5678999999999999999999987778889999987532 1 11
Q ss_pred eecceeecCCCeeEEcCC
Q psy4445 252 VIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 252 ~~~~~~l~~geVtYIsD~ 269 (279)
....+.+|++-+|...
T Consensus 79 --~~~~l~~Gd~~~i~~~ 94 (125)
T 3h8u_A 79 --IVTHLKAGDIAIAKPG 94 (125)
T ss_dssp --CEEEEETTEEEEECTT
T ss_pred --eEEEeCCCCEEEECCC
Confidence 1345677777776543
No 10
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=93.97 E-value=0.2 Score=35.93 Aligned_cols=70 Identities=11% Similarity=0.086 Sum_probs=48.7
Q ss_pred ccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCC
Q psy4445 183 SCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNE 262 (279)
Q Consensus 183 s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~ge 262 (279)
....+.+..+.. .+.+++..+...||+..+-|-|.+..=++-|++|+++-.. . + ....+.+|+
T Consensus 13 ~~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~v~~G~~~~~~---~-~------------~~~~l~~Gd 75 (105)
T 1v70_A 13 NPEKMAKIPVFQ-SERMLYDLYALLPGQAQKVHVHEGSDKVYYALEGEVVVRV---G-E------------EEALLAPGM 75 (105)
T ss_dssp CSSSCEEEEEEE-ETTEEEEEEEECTTCEEEEECCSSCEEEEEEEESCEEEEE---T-T------------EEEEECTTC
T ss_pred CccccccceecC-CCceEEEEEEECCCCcCCccCCCCCcEEEEEEeCEEEEEE---C-C------------EEEEeCCCC
Confidence 334444444432 5789999999999999999999986668889999987532 1 1 124566777
Q ss_pred eeEEcCC
Q psy4445 263 VCYINGK 269 (279)
Q Consensus 263 VtYIsD~ 269 (279)
+-+|...
T Consensus 76 ~~~ip~~ 82 (105)
T 1v70_A 76 AAFAPAG 82 (105)
T ss_dssp EEEECTT
T ss_pred EEEECCC
Confidence 7766654
No 11
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=93.92 E-value=0.34 Score=35.61 Aligned_cols=74 Identities=15% Similarity=0.168 Sum_probs=51.4
Q ss_pred cccccccceeeeeecCCCcceeEEEeecCCCccccccCCCc-ceeeEeecceEEEEeecCCCCCCCCCCCcceeecceee
Q psy4445 180 NKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADA-HCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPL 258 (279)
Q Consensus 180 nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gs-hC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l 258 (279)
.++....+.|..+.. ++.+++..+...||+..+.|.|... .-++.|++|+++-.. ..+ ....+
T Consensus 15 ~~~~~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~H~~~~e~~~~vl~G~~~~~~---~~~------------~~~~l 78 (110)
T 2q30_A 15 VRFDDQRFVMELVHE-SENFKIVSFTFKAGQELPVHSHNIEGELNIVVLEGEGEFVG---DGD------------AVIPA 78 (110)
T ss_dssp CCCCSSSCEEEEEEE-CSSCEEEEEEECTTCEEEEECCSSSCEEEEEEEESCEEEEC---GGG------------CEEEE
T ss_pred eeecCCCEEEEEEec-CCCEEEEEEEECCCCcCCcccCCCCccEEEEEEeCEEEEEe---CCC------------EEEEE
Confidence 445555677766654 6789999999999999999999863 333789999987532 101 12457
Q ss_pred cCCCeeEEcCC
Q psy4445 259 KLNEVCYINGK 269 (279)
Q Consensus 259 ~~geVtYIsD~ 269 (279)
.+|++-+|...
T Consensus 79 ~~Gd~~~ip~~ 89 (110)
T 2q30_A 79 PRGAVLVAPIS 89 (110)
T ss_dssp CTTEEEEEETT
T ss_pred CCCCEEEeCCC
Confidence 77777777654
No 12
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=93.87 E-value=0.068 Score=40.84 Aligned_cols=61 Identities=20% Similarity=0.190 Sum_probs=45.0
Q ss_pred CCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcC
Q psy4445 195 GNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYING 268 (279)
Q Consensus 195 i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD 268 (279)
+|+++.|.-+...||+.++.|.|....=++-|++|+++-+ .++. . .....+.+|++.||..
T Consensus 13 en~~~rV~r~~i~PG~~~~~H~H~~~~e~~~v~~G~~~v~---~~d~------~----~~~~~l~~G~~~~ip~ 73 (98)
T 3lag_A 13 DNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTIV---APDG------T----RSLAQLKTGRSYARKA 73 (98)
T ss_dssp ESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CEE---CTTS------C----EECCCBCTTCCEEECT
T ss_pred cCCeEEEEEEEECCCCccCcEECCCcEEEEEEeccEEEEE---eCCC------c----eEEEEecCCcEEEEcC
Confidence 3789999999999999999999998777788899987653 2221 1 1133577888888754
No 13
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=93.81 E-value=0.15 Score=37.91 Aligned_cols=39 Identities=18% Similarity=0.221 Sum_probs=34.3
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
++.++++.+...||+.++.|-|.+..=++.|++|+++.+
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~e~~~Vl~G~~~~~ 53 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDYVVVPMTTGPLLLE 53 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCEEEEESSCEEEEEE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCcEEEEEeecEEEEE
Confidence 678999999999999999999998666888999998753
No 14
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=92.12 E-value=2.1 Score=37.07 Aligned_cols=121 Identities=14% Similarity=0.121 Sum_probs=71.7
Q ss_pred HHHHHhhcCccccccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee--eeccc-----------c
Q psy4445 106 FVMKSYKSNPMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM--TNETK-----------K 172 (279)
Q Consensus 106 ~ll~~y~sn~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~--~g~~~-----------e 172 (279)
+.|+.-.-+..+|.+... .-+|-++...+ ..+.++...||...+.|.|....-++ +|++. +
T Consensus 5 ~~~~~~~f~~~~~~~~~~----Gv~~~~l~~~~--~~~~~~~~~pg~~~~~H~H~~~e~~~Vl~G~~~~~~~~~~~~l~~ 78 (243)
T 3h7j_A 5 EDMQELYFPTPKLIEWEN----GVRQYSTVRGD--TEVLMSYVPPHTNVEPHQHKEVQIGMVVSGELMMTVGDVTRKMTA 78 (243)
T ss_dssp HHHHHHHSCCCEEEECTT----SCEEEEEEETT--EEEEEEEECTTEEEEEECCSSEEEEEEEESEEEEEETTEEEEEET
T ss_pred hhhhhcccCCccccccCC----CeEEEEEECCC--CEEEEEEECCCCccCCEECCCcEEEEEEEeEEEEEECCEEEEECC
Confidence 445544444457766552 23444554333 35555667999999999999766655 34332 2
Q ss_pred --eeecccC-------ccc-------------------ccccceeeeeecC------------CCcceeEEEeecC-CCc
Q psy4445 173 --SLYTSSL-------NKV-------------------SCTLYTRNLVDAG------------NDKFNLMILCWGE-GHG 211 (279)
Q Consensus 173 --~~y~~~~-------nk~-------------------s~t~YTRnlV~~i------------~~~~elvll~W~p-GQ~ 211 (279)
.+|-.++ |.. .+..|.+..+... ...++++++.+.| |+.
T Consensus 79 Gd~i~~ip~~~~H~~~n~~~~~~~~l~i~r~~~~e~~~~p~g~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~ 158 (243)
T 3h7j_A 79 LESAYIAPPHVPHGARNDTDQEVIAIDIKRLKADETYTSPEDYFLDIFKTRDLLPGMEVTFFVEDWVEIMLAKIPGNGGE 158 (243)
T ss_dssp TTCEEEECTTCCEEEEECSSSCEEEEEEEECCTTCCCCCCTTSEECCEECSCSBTTBCEEEEEETTEEEEEEEECTTTEE
T ss_pred CCEEEEcCCCCcEeeEeCCCCcEEEEEEeccCccccCCCchhhhhhhccCcccccCcceeeeccceeEEEEEEECCCCCc
Confidence 3541221 100 0122332222211 1236788889999 999
Q ss_pred cccccCCCcceeeEeecceEEE
Q psy4445 212 SSVHDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 212 SpIHDH~gshC~~kVL~G~l~E 233 (279)
++.|.|.+. =++.||+|+++-
T Consensus 159 ~~~H~H~~~-e~~~Vl~G~~~~ 179 (243)
T 3h7j_A 159 MPFHKHRNE-QIGICIGGGYDM 179 (243)
T ss_dssp EEEECCSSE-EEEEECSSCEEE
T ss_pred CCCEeCCCc-EEEEEEECEEEE
Confidence 999999984 577899999874
No 15
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=91.96 E-value=0.45 Score=36.17 Aligned_cols=46 Identities=17% Similarity=0.191 Sum_probs=38.6
Q ss_pred cceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 186 LYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 186 ~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
+.+|..+. .+.+++..+...||...|.|.|.. .=++.|++|+++-.
T Consensus 30 G~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~ 75 (126)
T 4e2g_A 30 GFAMQAIQ--GKNLMLNWVRIEPNTEMPAHEHPH-EQAGVMLEGTLELT 75 (126)
T ss_dssp TEEEEEEE--CSSCEEEEEEECTTCEEEEECCSS-EEEEEEEEECEEEE
T ss_pred CeEEEEEe--CCCeEEEEEEECCCCcCCCccCCC-ceEEEEEEeEEEEE
Confidence 56666664 568999999999999999999997 66889999998753
No 16
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=91.54 E-value=0.59 Score=34.82 Aligned_cols=68 Identities=7% Similarity=0.118 Sum_probs=48.9
Q ss_pred cccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCe
Q psy4445 184 CTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEV 263 (279)
Q Consensus 184 ~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geV 263 (279)
..+.++..+.. ++.+++..+...||+..|-|-|.. .-++-|++|+++-.. .+ ....+.+|++
T Consensus 26 ~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~H~~-~e~~~vl~G~~~~~~----~~------------~~~~l~~Gd~ 87 (115)
T 1yhf_A 26 QDQMLSRTLVQ-RQDLGITVFSLDKGQEIGRHSSPG-DAMVTILSGLAEITI----DQ------------ETYRVAEGQT 87 (115)
T ss_dssp TTCEEEEEEEE-ETTEEEEEEEECTTCEEEEECCSS-EEEEEEEESEEEEEE----TT------------EEEEEETTCE
T ss_pred CCCeEEEEEEe-CCceEEEEEEECCCCccCCEECCC-cEEEEEEeCEEEEEE----CC------------EEEEECCCCE
Confidence 34555555443 567899999999999999999996 788899999987542 11 1245777777
Q ss_pred eEEcCC
Q psy4445 264 CYINGK 269 (279)
Q Consensus 264 tYIsD~ 269 (279)
-+|...
T Consensus 88 ~~ip~~ 93 (115)
T 1yhf_A 88 IVMPAG 93 (115)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 777654
No 17
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=91.13 E-value=1.1 Score=33.60 Aligned_cols=79 Identities=14% Similarity=0.188 Sum_probs=51.4
Q ss_pred ccceeecccCcccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCc
Q psy4445 170 TKKSLYTSSLNKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKP 249 (279)
Q Consensus 170 ~~e~~y~~~~nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~p 249 (279)
|-|.+|....+.. ....|.++. .+.+.+..+.-.||+..+.|.|.. .-++-|++|+++-.. . +
T Consensus 2 ~~~~~~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i---~-~-------- 64 (117)
T 2b8m_A 2 MIEKVYEFKRDAK--TKVVEKLVN--TEHVQINHIVLPRGEQMPKHYSNS-YVHLIIIKGEMTLTL---E-D-------- 64 (117)
T ss_dssp CSSCCCCCCSSCC--SCEEEEEEE--CSSCEEEEEEEETTCBCCCEECSS-CEEEEEEESEEEEEE---T-T--------
T ss_pred hhheeeeeecCCC--cceeeeecC--CCceEEEEEEECCCCcCCCEeCCC-cEEEEEEeCEEEEEE---C-C--------
Confidence 3456665543211 233344443 578899999999999999999976 567789999987643 1 1
Q ss_pred ceeecce-eecCCCeeEEcCC
Q psy4445 250 LQVIGKS-PLKLNEVCYINGK 269 (279)
Q Consensus 250 L~~~~~~-~l~~geVtYIsD~ 269 (279)
... .+.+|++-+|...
T Consensus 65 ----~~~~~l~~Gd~i~ip~~ 81 (117)
T 2b8m_A 65 ----QEPHNYKEGNIVYVPFN 81 (117)
T ss_dssp ----SCCEEEETTCEEEECTT
T ss_pred ----EEEEEeCCCCEEEECCC
Confidence 112 5667777776654
No 18
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=90.83 E-value=0.78 Score=34.23 Aligned_cols=67 Identities=10% Similarity=0.165 Sum_probs=48.6
Q ss_pred ccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCee
Q psy4445 185 TLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVC 264 (279)
Q Consensus 185 t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVt 264 (279)
.++++..+... +.+++..+...||+..|.|.|.. .=++.|++|+++-.. .+ ....+.+|++-
T Consensus 21 ~g~~~~~l~~~-~~~~~~~~~~~pg~~~~~H~H~~-~e~~~vl~G~~~~~~----~~------------~~~~l~~Gd~~ 82 (116)
T 2pfw_A 21 GGLKRQMLGFN-HELMAVKIWFDKGAEGYVHAHRH-SQVSYVVEGEFHVNV----DG------------VIKVLTAGDSF 82 (116)
T ss_dssp TTEEEEEEEEE-TTEEEEEEEECTTEEEEEECCSS-EEEEEEEEECEEEEE----TT------------EEEEECTTCEE
T ss_pred CCeEEEEEecC-CceEEEEEEECCCCcCCcEECCc-ceEEEEEeeEEEEEE----CC------------EEEEeCCCCEE
Confidence 46666666543 56899999999999999999995 667889999987543 11 13456777777
Q ss_pred EEcCC
Q psy4445 265 YINGK 269 (279)
Q Consensus 265 YIsD~ 269 (279)
+|...
T Consensus 83 ~ip~~ 87 (116)
T 2pfw_A 83 FVPPH 87 (116)
T ss_dssp EECTT
T ss_pred EECcC
Confidence 77654
No 19
>3i7d_A Sugar phosphate isomerase; YP_168127.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.30A {Ruegeria pomeroyi dss-3}
Probab=90.39 E-value=0.71 Score=37.88 Aligned_cols=50 Identities=18% Similarity=0.235 Sum_probs=40.6
Q ss_pred ccceeeeee--cCCCcceeEEEeecCCCcc-ccccCCCcceeeEeecceEEEE
Q psy4445 185 TLYTRNLVD--AGNDKFNLMILCWGEGHGS-SVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 185 t~YTRnlV~--~i~~~~elvll~W~pGQ~S-pIHDH~gshC~~kVL~G~l~E~ 234 (279)
.++.|..+. .....+++.++...||+.+ +.|.|.+..=++.||+|+++-.
T Consensus 27 ~G~~~~~l~~~~~~~~~~~~~~~l~pG~~~~~~H~H~~~eE~~~Vl~G~~~~~ 79 (163)
T 3i7d_A 27 DGRSSLRLGDAGGLSQFGVNLVRLEPGAKSSLRHYHMEQDEFVMVTEGALVLV 79 (163)
T ss_dssp TTEEEEEHHHHTTCCSEEEEEEEECTTCBSSSSEEESSCCEEEEEEESCEEEE
T ss_pred CCeEEEEcccCCCCCeEEEEEEEECCCCcCCCCccCCCCcEEEEEEECEEEEE
Confidence 567777775 3356899999999999976 7999998767889999988754
No 20
>2gu9_A Tetracenomycin polyketide synthesis protein; X-RAY diffraction, cupin, immune system; 1.40A {Xanthomonas campestris} PDB: 2ilb_A 3h50_A
Probab=90.33 E-value=0.74 Score=33.67 Aligned_cols=39 Identities=13% Similarity=0.142 Sum_probs=33.8
Q ss_pred CCcceeEEEeecCCCccccc--cCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSSVH--DHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIH--DH~gshC~~kVL~G~l~E~ 234 (279)
++.+++..+...||+..+.| .|.+..=++-|++|+++..
T Consensus 18 ~~~~~~~~~~~~pg~~~~~h~~~H~~~~e~~~vl~G~~~~~ 58 (113)
T 2gu9_A 18 LRQVQAAEMVIAPGDREGGPDNRHRGADQWLFVVDGAGEAI 58 (113)
T ss_dssp ETTEEEEEEEECTTCEEECCCSSSCCCEEEEEEEECCEEEE
T ss_pred CCcEEEEEEEECCCCccCCcccccCCCcEEEEEEeCEEEEE
Confidence 46789999999999999999 9986678899999988754
No 21
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=89.42 E-value=1.2 Score=34.02 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=38.5
Q ss_pred ccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 185 TLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 185 t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
..-+|.++. ++.++++.+...||+..|-|.|... =++.||+|+++-+
T Consensus 24 ~~~~~~l~~--~~~~~v~~~~l~~G~~~~~H~H~~~-e~~~Vl~G~~~~~ 70 (114)
T 3fjs_A 24 QTPSAALFK--EHRLEVMRMVLPAGKQVGSHSVAGP-STIQCLEGEVEIG 70 (114)
T ss_dssp GCCCEEEEE--ETTEEEEEEEECTTCEEEEECCSSC-EEEEEEESCEEEE
T ss_pred CCeeEEEEe--CCCEEEEEEEECCCCccCceeCCCc-EEEEEEECEEEEE
Confidence 445566665 5789999999999999999999984 6788999988753
No 22
>3kgz_A Cupin 2 conserved barrel domain protein; metalloprotein, structural genomics, PSI-2, protein structur initiative; 1.85A {Rhodopseudomonas palustris}
Probab=87.81 E-value=0.95 Score=37.29 Aligned_cols=67 Identities=18% Similarity=0.119 Sum_probs=47.5
Q ss_pred cceeeee-ecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCee
Q psy4445 186 LYTRNLV-DAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVC 264 (279)
Q Consensus 186 ~YTRnlV-~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVt 264 (279)
+.+|..+ ......|++..+.-.||+.+|.|.|.... ++.|++|+++-+. .+ ....+.+|++-
T Consensus 30 g~~~~~L~~~~~~~~~~~~~~l~pG~~~~~H~H~~~E-~~~Vl~G~~~v~v----~g------------~~~~l~~Gd~i 92 (156)
T 3kgz_A 30 DVSRQLLFADPNLACEWRYFEVDEGGYSTLERHAHVH-AVMIHRGHGQCLV----GE------------TISDVAQGDLV 92 (156)
T ss_dssp EEEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSSCE-EEEEEEEEEEEEE----TT------------EEEEEETTCEE
T ss_pred CeEEEEEEcCCCCcEEEEEEEECCCCccCceeCCCcE-EEEEEeCEEEEEE----CC------------EEEEeCCCCEE
Confidence 4455554 44457888888888999999999999865 6789999887642 11 13456677777
Q ss_pred EEcCC
Q psy4445 265 YINGK 269 (279)
Q Consensus 265 YIsD~ 269 (279)
||...
T Consensus 93 ~ip~~ 97 (156)
T 3kgz_A 93 FIPPM 97 (156)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 77653
No 23
>1lr5_A Auxin binding protein 1; beta jellyroll, double stranded beta helix, germin-like PROT protein binding; HET: NAG BMA MAN; 1.90A {Zea mays} SCOP: b.82.1.2 PDB: 1lrh_A*
Probab=87.74 E-value=1.7 Score=34.95 Aligned_cols=66 Identities=14% Similarity=0.069 Sum_probs=44.6
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
...+++..+.-.||+.++.|.|.... ++.|++|+++...-....+. -.......+.+|++-||...
T Consensus 38 ~~~~~~~~~~~~pg~~~~~H~H~~~E-~~~Vl~G~~~~~~~~~~~~~-------~~~~~~~~l~~Gd~i~ip~~ 103 (163)
T 1lr5_A 38 MKEVEVWLQTISPGQRTPIHRHSCEE-VFTVLKGKGTLLMGSSSLKY-------PGQPQEIPFFQNTTFSIPVN 103 (163)
T ss_dssp CSSEEEEEEEECTTCBCCEEEESSCE-EEEEEECCEEEEECCSSSSS-------CCSCEEEEECTTEEEEECTT
T ss_pred CCcEEEEEEEECCCCcCCCeECCCCe-EEEEEeCEEEEEECCccccc-------cCccEEEEeCCCCEEEECCC
Confidence 45788888889999999999998866 88999999876542211000 00112346777777777654
No 24
>2oa2_A BH2720 protein; 10175341, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative, PSI-2, unknow function; HET: MSE; 1.41A {Bacillus halodurans}
Probab=87.63 E-value=2.1 Score=34.02 Aligned_cols=64 Identities=11% Similarity=0.073 Sum_probs=45.3
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
...+++..+...||...+.|.|.+..=++.|++|+++-..-... ..+ .....+.+|++-+|...
T Consensus 40 ~~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i~~~~--------~~~--~~~~~l~~Gd~i~ip~g 103 (148)
T 2oa2_A 40 GDHLQVTLMSIQVGEDIGLEIHPHLDQFLRVEEGRGLVQMGHRQ--------DNL--HFQEEVFDDYAILIPAG 103 (148)
T ss_dssp CSSCEEEEEEECTTCBCCCBCCTTCEEEEEEEESEEEEEEESBT--------TBC--CEEEEEETTCEEEECTT
T ss_pred CCceEEEEEEECCCCccCceECCCCcEEEEEEeCEEEEEECCcc--------ccc--eeeEEECCCCEEEECCC
Confidence 56789999999999999999999766788899999876542211 000 01245777777777654
No 25
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=85.54 E-value=1 Score=34.74 Aligned_cols=38 Identities=21% Similarity=0.247 Sum_probs=32.1
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
+..+++..+.-.||+.+|.|-|....- +.|++|+++-.
T Consensus 36 ~~~~~~~~~~~~pg~~~~~H~H~~~e~-~~vl~G~~~~~ 73 (145)
T 3ht1_A 36 ADRFVLTEFEVSPNGSTPPHFHEWEHE-IYVLEGSMGLV 73 (145)
T ss_dssp CCSEEEEEEEEEEEEECCCEECSSCEE-EEEEEECEEEE
T ss_pred CCcEEEEEEEECCCCcCCCccCCCceE-EEEEEeEEEEE
Confidence 568888888889999999999998665 56999988765
No 26
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=84.96 E-value=0.68 Score=35.44 Aligned_cols=40 Identities=23% Similarity=0.261 Sum_probs=33.3
Q ss_pred cCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEE
Q psy4445 194 AGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 194 ~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E 233 (279)
..+++++|..+...||..++-|.|....=++-+++|+++.
T Consensus 12 ~~~~~v~v~~~~l~PG~~~~~H~H~~~~~iv~v~~G~~~~ 51 (98)
T 2ozi_A 12 IDNDEVRVTEWRLPPGSATGHHTHGMDYVVVPMADGEMTI 51 (98)
T ss_dssp EESSSEEEEEEEECTTEECCSEECCSCEEEEESSCBC-CE
T ss_pred EeCCcEEEEEEEECCCCccCcEeCCCCEEEEEEeeEEEEE
Confidence 3488999999999999999999999876566678998765
No 27
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=84.77 E-value=1.5 Score=37.62 Aligned_cols=111 Identities=9% Similarity=0.154 Sum_probs=70.0
Q ss_pred ccccccCccc-ceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee--eec-----------ccc--eeeccc----
Q psy4445 119 RKYSKFDKYK-YTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM--TNE-----------TKK--SLYTSS---- 178 (279)
Q Consensus 119 ~~ya~~d~~r-YtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~--~g~-----------~~e--~~y~~~---- 178 (279)
.....+.+.. -+|.|++. +...+.++...||+.-|-|.|.+..-++ +|+ +++ .+|.-+
T Consensus 16 ~~~~~~~~~~~~sr~l~~~--~~~~~~~~~~~~G~~~~~h~h~~~~~~~Vl~G~~~~~i~~~~~~l~~Gd~~~~p~~~~H 93 (227)
T 3rns_A 16 NRLITSKEAEVVSMRILNQ--PNSYISLFSLAKDEEITAEAMLGNRYYYCFNGNGEIFIENNKKTISNGDFLEITANHNY 93 (227)
T ss_dssp HHHCCCCTTCEEEEEEEEC--SSEEEEEEEECTTCEEEECSCSSCEEEEEEESEEEEEESSCEEEEETTEEEEECSSCCE
T ss_pred HHcCCcCCCCEEEEehhcC--CCcEEEEEEECCCCccCccccCCCEEEEEEeCEEEEEECCEEEEECCCCEEEECCCCCE
Confidence 3333444454 46888864 4578888888999999999999876655 231 111 111000
Q ss_pred ------C----------------------------------cccccc-cceeeeeecCCCcceeEEEeecCCCccccccC
Q psy4445 179 ------L----------------------------------NKVSCT-LYTRNLVDAGNDKFNLMILCWGEGHGSSVHDH 217 (279)
Q Consensus 179 ------~----------------------------------nk~s~t-~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH 217 (279)
. ...... ..+|.++. ++.+.+.++.+.||+..+.|.|
T Consensus 94 ~~~a~~~~~~l~i~~~~~~~~~~~~~~~~l~~~~~~~~~d~~~~~~g~~~~~~l~~--~~~~~~~~~~~~~G~~~~~H~H 171 (227)
T 3rns_A 94 SIEARDNLKLIEIGEKIGDGNMENKTLKMLESASAFNLAEVVEYQEGKIVSKNLVA--KPNLVMTIMSFWKGESLDPHKA 171 (227)
T ss_dssp EEEESSSEEEEEEEECC----------------CCEESGGGSCCCTTCEEEEEEEE--ETTEEEEEEEECTTCEEEEECC
T ss_pred EEEECCCcEEEEEEeecccchhhhhHhhcCCccccCcHHHccccCCCCEEEEEEEE--CCCeEEEEEEECCCCccCCEEC
Confidence 0 000111 12222222 3568999999999999999999
Q ss_pred CCcceeeEeecceEEEE
Q psy4445 218 ADAHCFMKMLDGCLTET 234 (279)
Q Consensus 218 ~gshC~~kVL~G~l~E~ 234 (279)
.+ .-++.||+|+++-+
T Consensus 172 ~~-~e~~~Vl~G~~~~~ 187 (227)
T 3rns_A 172 PG-DALVTVLDGEGKYY 187 (227)
T ss_dssp SS-EEEEEEEEEEEEEE
T ss_pred CC-cEEEEEEeEEEEEE
Confidence 97 45888999988753
No 28
>2f4p_A Hypothetical protein TM1010; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: UNL; 1.90A {Thermotoga maritima} SCOP: b.82.1.9
Probab=84.60 E-value=3.9 Score=32.68 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=33.2
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
...+++..+...||+..+.|-|.. .=++.|++|+++-.
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~E~~~Vl~G~~~~~ 82 (147)
T 2f4p_A 45 VFNTQVYDVVFEPGARTHWHSHPG-GQILIVTRGKGFYQ 82 (147)
T ss_dssp SSSCEEEEEEECTTCEECSEECTT-CEEEEEEEEEEEEE
T ss_pred CCcEEEEEEEECCCCccCceECCC-ceEEEEEeCEEEEE
Confidence 368999999999999999999998 66889999998753
No 29
>3ibm_A Cupin 2, conserved barrel domain protein; cupin 2 family, metal-binding site, beta barrel, PSI-2, NYSG structural genomics; 2.00A {Halorhodospira halophila SL1}
Probab=84.22 E-value=4.4 Score=33.35 Aligned_cols=56 Identities=14% Similarity=0.183 Sum_probs=41.3
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
..|++..+.-.||..++.|.|.. .=++.|++|+++-.. .+ ....+.+|++-||...
T Consensus 54 ~~~~~~~~~l~pG~~~~~H~H~~-~E~~~Vl~G~~~~~i----~~------------~~~~l~~Gd~i~ip~~ 109 (167)
T 3ibm_A 54 PAFETRYFEVEPGGYTTLERHEH-THVVMVVRGHAEVVL----DD------------RVEPLTPLDCVYIAPH 109 (167)
T ss_dssp SSEEEEEEEECTTCBCCCBBCSS-CEEEEEEESEEEEEE----TT------------EEEEECTTCEEEECTT
T ss_pred CcEEEEEEEECCCCCCCCccCCC-cEEEEEEeCEEEEEE----CC------------EEEEECCCCEEEECCC
Confidence 58899999999999999999986 556779999976532 01 1345667777776553
No 30
>1o4t_A Putative oxalate decarboxylase; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; 1.95A {Thermotoga maritima} SCOP: b.82.1.9
Probab=84.19 E-value=2.3 Score=33.18 Aligned_cols=69 Identities=16% Similarity=0.185 Sum_probs=48.4
Q ss_pred ccceee-eeecC---CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecC
Q psy4445 185 TLYTRN-LVDAG---NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKL 260 (279)
Q Consensus 185 t~YTRn-lV~~i---~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~ 260 (279)
..+.+. ++... ...+++..+.-.||..++.|-|.+..=++.||+|+++-.. . + ....+.+
T Consensus 39 g~~~~~~ll~p~~~~~~~~~~~~~~~~pg~~~~~H~H~~~~E~~~Vl~G~~~~~i---~-~------------~~~~l~~ 102 (133)
T 1o4t_A 39 GEVEMAHLLSKEAMHNKARLFARMKLPPGSSVGLHKHEGEFEIYYILLGEGVFHD---N-G------------KDVPIKA 102 (133)
T ss_dssp SEEEEEECSCTTTTTTSEEEEEEEEECTTCEEEEEECCSEEEEEEEEESEEEEEE---T-T------------EEEEEET
T ss_pred CeEEEEEccChhhCCCceEEEEEEEECCCCccCceECCCccEEEEEEeCEEEEEE---C-C------------EEEEeCC
Confidence 456665 66522 2345777888899999999999876778899999987542 1 1 1345677
Q ss_pred CCeeEEcCC
Q psy4445 261 NEVCYINGK 269 (279)
Q Consensus 261 geVtYIsD~ 269 (279)
|++.+|...
T Consensus 103 Gd~i~i~~~ 111 (133)
T 1o4t_A 103 GDVCFTDSG 111 (133)
T ss_dssp TEEEEECTT
T ss_pred CcEEEECCC
Confidence 777777654
No 31
>2ozj_A Cupin 2, conserved barrel; cupin superfamily protein, struct genomics, joint center for structural genomics, JCSG; HET: MSE; 1.60A {Desulfitobacterium hafniense}
Probab=84.17 E-value=3.2 Score=30.93 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=42.0
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
+..++.++...||+..+-|-|.. .-++.||+|+++-.. . + ....+.+|++-+|....
T Consensus 36 ~~~~~~~~~~~~g~~~~~H~h~~-~e~~~vl~G~~~~~i---~-~------------~~~~l~~Gd~i~i~~~~ 92 (114)
T 2ozj_A 36 DRVQISLFSFADGESVSEEEYFG-DTLYLILQGEAVITF---D-D------------QKIDLVPEDVLMVPAHK 92 (114)
T ss_dssp SSEEEEEEEEETTSSCCCBCCSS-CEEEEEEEEEEEEEE---T-T------------EEEEECTTCEEEECTTC
T ss_pred CCceEEEEEECCCCccccEECCC-CeEEEEEeCEEEEEE---C-C------------EEEEecCCCEEEECCCC
Confidence 55778888889999999999987 558899999987432 1 1 13457778877777653
No 32
>3jzv_A Uncharacterized protein RRU_A2000; structural genomics, cupin-2 fold, unknown function, PSI-2, structure initiative; HET: MSE; 2.30A {Rhodospirillum rubrum}
Probab=84.06 E-value=1.9 Score=35.88 Aligned_cols=67 Identities=21% Similarity=0.180 Sum_probs=46.5
Q ss_pred cceeeee-ecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCee
Q psy4445 186 LYTRNLV-DAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVC 264 (279)
Q Consensus 186 ~YTRnlV-~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVt 264 (279)
+.+|..+ ......|.+..+.=.||+.+|.|-|.... ++.|++|+++-.. .+ ....+.+|++-
T Consensus 39 gv~~r~L~~~~~~~~~~~~~~l~pG~~~~~H~H~~~E-~~~Vl~G~~~~~v----~g------------~~~~l~~GD~i 101 (166)
T 3jzv_A 39 SVTRQVLFSGNGLTGELRYFEVGPGGHSTLERHQHAH-GVMILKGRGHAMV----GR------------AVSAVAPYDLV 101 (166)
T ss_dssp EEEEEEEECCTTCSEEEEEEEEEEEEECCCBBCSSCE-EEEEEEECEEEEE----TT------------EEEEECTTCEE
T ss_pred CeEEEEEECCCCCeEEEEEEEECCCCccCceeCCCcE-EEEEEeCEEEEEE----CC------------EEEEeCCCCEE
Confidence 3445444 44457888888888999999999999865 6789999887532 11 13456677777
Q ss_pred EEcCC
Q psy4445 265 YINGK 269 (279)
Q Consensus 265 YIsD~ 269 (279)
||...
T Consensus 102 ~ip~g 106 (166)
T 3jzv_A 102 TIPGW 106 (166)
T ss_dssp EECTT
T ss_pred EECCC
Confidence 76553
No 33
>3l2h_A Putative sugar phosphate isomerase; AFE_0303, structural GEN joint center for structural genomics, JCSG; HET: MSE CXS; 1.85A {Acidithiobacillus ferrooxidans}
Probab=83.89 E-value=2.6 Score=33.73 Aligned_cols=39 Identities=18% Similarity=0.137 Sum_probs=33.1
Q ss_pred CCcceeEEEeecCCC-ccccccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGH-GSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ-~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
...+++..+...||+ ..+.|-|....=++.||+|+++-.
T Consensus 43 ~~~~~~~~~~l~pg~~~~~~H~H~~~~E~~~Vl~G~~~~~ 82 (162)
T 3l2h_A 43 LRHMGIHLIQIEPGKESTEYHLHHYEEEAVYVLSGKGTLT 82 (162)
T ss_dssp CCSEEEEEEEECTTCBSSSSBEESSCCEEEEEEESCEEEE
T ss_pred CCeEEEEEEEECCCCcCCCCccCCCCCEEEEEEEEEEEEE
Confidence 567899999999999 589999966677889999988754
No 34
>1dgw_A Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_A 1cau_A 1cav_A 1caw_A 1cax_A
Probab=83.67 E-value=1.3 Score=36.89 Aligned_cols=59 Identities=14% Similarity=0.134 Sum_probs=43.5
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+++..+.=.||...+.| |.++.=++.||+|+++-+...... .....+++|+|-|+...
T Consensus 40 ~~~~~~~~l~pg~~~~pH-h~~a~E~~yVl~G~~~v~v~~~~~------------~~~~~l~~GDv~~~P~g 98 (178)
T 1dgw_A 40 DYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNPDG------------RDTYKLDQGDAIKIQAG 98 (178)
T ss_dssp TEEEEEEEECTTEEEEEE-EESSEEEEEEEESEEEEEEEETTE------------EEEEEEETTEEEEECTT
T ss_pred cEEEEEEEecCCcEecCc-CCCCCEEEEEEeEEEEEEEEeCCC------------cEEEEECCCCEEEECCC
Confidence 477788888999999999 999999999999998876553211 11335667777766543
No 35
>3h7j_A Bacilysin biosynthesis protein BACB; YWFC, bacilysin synthesis, anticapsin synthesis, BI-Cu double stranded beta helix, antibiotic biosynthesis; HET: PPY; 1.87A {Bacillus subtilis} PDB: 3h7y_A* 3h9a_A*
Probab=82.53 E-value=2.1 Score=37.09 Aligned_cols=62 Identities=10% Similarity=0.072 Sum_probs=43.1
Q ss_pred cccceeecccC-cccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 169 ETKKSLYTSSL-NKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 169 ~~~e~~y~~~~-nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
.+.|.+|.... .+.. .+.+|..+... ...+.++...||+..|-|.|.. .=++.||+|+++-+
T Consensus 6 ~~~~~~f~~~~~~~~~-~Gv~~~~l~~~--~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~ 68 (243)
T 3h7j_A 6 DMQELYFPTPKLIEWE-NGVRQYSTVRG--DTEVLMSYVPPHTNVEPHQHKE-VQIGMVVSGELMMT 68 (243)
T ss_dssp HHHHHHSCCCEEEECT-TSCEEEEEEET--TEEEEEEEECTTEEEEEECCSS-EEEEEEEESEEEEE
T ss_pred hhhhcccCCccccccC-CCeEEEEEECC--CCEEEEEEECCCCccCCEECCC-cEEEEEEEeEEEEE
Confidence 35567776653 3333 34565566532 3467777789999999999996 66888999998743
No 36
>3cew_A Uncharacterized cupin protein; all beta-protein, jelly-roll (cupin-2), structural genomics, protein structure initiative; 2.31A {Bacteroides fragilis}
Probab=82.19 E-value=2.9 Score=31.77 Aligned_cols=39 Identities=23% Similarity=0.184 Sum_probs=31.5
Q ss_pred CCcceeEEEeecCCCccc-cccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSS-VHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~Sp-IHDH~gshC~~kVL~G~l~E~ 234 (279)
.+.+++.++...||+..+ .|.|....=++-|++|+++-.
T Consensus 23 ~~~~~~~~~~~~pg~~~~~~H~H~~~e~~~~vl~G~~~~~ 62 (125)
T 3cew_A 23 LTGAEVSINHLPAGAGVPFVHSHKQNEEIYGILSGKGFIT 62 (125)
T ss_dssp CSSCEEEEEEECTTCBCSSEEEESSEEEEEEEEEEEEEEE
T ss_pred CCCcEEEEEEECCCCCCCCCccCCCceEEEEEEeCEEEEE
Confidence 567888888999999998 899987544555999988753
No 37
>2bnm_A Epoxidase; oxidoreductase, cupin, HTH, cation-dependant, zinc, fosfomycin; 1.7A {Streptomyces wedmorensis} SCOP: a.35.1.3 b.82.1.10 PDB: 1zz7_A 1zz8_A 1zz9_A 1zzb_A 1zz6_A 1zzc_A 2bnn_A 2bno_A 3scf_A 3scg_A 3sch_A
Probab=82.03 E-value=5.8 Score=32.45 Aligned_cols=73 Identities=12% Similarity=0.123 Sum_probs=51.6
Q ss_pred ccceeeeeec--CCCcceeEEEeecCCCccc---cccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeec
Q psy4445 185 TLYTRNLVDA--GNDKFNLMILCWGEGHGSS---VHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLK 259 (279)
Q Consensus 185 t~YTRnlV~~--i~~~~elvll~W~pGQ~Sp---IHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~ 259 (279)
.+|++..+.. ....+++..+...||..++ .|.|.+ .=++.||+|+++-.. ... + ......+.
T Consensus 101 ~~~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~~h~h~~-~E~~~Vl~G~~~~~~---~~~-----~----~~~~~~l~ 167 (198)
T 2bnm_A 101 DYYVYNCLVRTKRAPSLVPLVVDVLTDNPDDAKFNSGHAG-NEFLFVLEGEIHMKW---GDK-----E----NPKEALLP 167 (198)
T ss_dssp TTEEEEECCCCTTSTTCEEEEEEECCCCGGGCCCCCCCSS-CEEEEEEESCEEEEE---SCT-----T----SCEEEEEC
T ss_pred CceEEEeeccCCCCCcceEEEEEEcCCCCCcccccccCCC-eEEEEEEeeeEEEEE---CCc-----C----CcccEEEC
Confidence 4566666653 2578899999999999988 699988 567789999987543 111 0 01245788
Q ss_pred CCCeeEEcCCC
Q psy4445 260 LNEVCYINGKN 270 (279)
Q Consensus 260 ~geVtYIsD~i 270 (279)
+|++-|+....
T Consensus 168 ~GD~~~~~~~~ 178 (198)
T 2bnm_A 168 TGASMFVEEHV 178 (198)
T ss_dssp TTCEEEECTTC
T ss_pred CCCEEEeCCCC
Confidence 99999987654
No 38
>1fi2_A Oxalate oxidase, germin; beta-jellyroll, oxidoreductase; 1.60A {Hordeum vulgare} SCOP: b.82.1.2 PDB: 2et1_A 2ete_A* 2et7_A
Probab=80.85 E-value=4.7 Score=33.92 Aligned_cols=66 Identities=14% Similarity=0.044 Sum_probs=47.4
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..+++..+...||...+.|-|..+.=++.|++|+++-......+.+ ..+ ....+.+|++-+|...+
T Consensus 70 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~v~~~~~~~~~-----~~~---~~~~l~~GD~~~iP~g~ 135 (201)
T 1fi2_A 70 LGVSMNRVDFAPGGTNPPHIHPRATEIGMVMKGELLVGILGSLDSG-----NKL---YSRVVRAGETFVIPRGL 135 (201)
T ss_dssp SSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECCGGGT-----TCE---EEEEEETTCEEEECTTC
T ss_pred CceEEEEEEECCCCCCCCeECCCCCEEEEEEeCEEEEEEEcCCCCC-----CeE---EEEEECCCCEEEECCCC
Confidence 3678888999999999999999877899999999876554321000 011 13568888888876554
No 39
>3rns_A Cupin 2 conserved barrel domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 2.07A {Leptotrichia buccalis}
Probab=80.31 E-value=5.3 Score=34.16 Aligned_cols=53 Identities=2% Similarity=-0.021 Sum_probs=40.9
Q ss_pred cccccccc-eeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEe
Q psy4445 180 NKVSCTLY-TRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 180 nk~s~t~Y-TRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~r 235 (279)
.++.+..- +|.++. ++...++++...||+.-|-|.|++ .=++.||+|++.-+.
T Consensus 19 ~~~~~~~~~sr~l~~--~~~~~~~~~~~~~G~~~~~h~h~~-~~~~~Vl~G~~~~~i 72 (227)
T 3rns_A 19 ITSKEAEVVSMRILN--QPNSYISLFSLAKDEEITAEAMLG-NRYYYCFNGNGEIFI 72 (227)
T ss_dssp CCCCTTCEEEEEEEE--CSSEEEEEEEECTTCEEEECSCSS-CEEEEEEESEEEEEE
T ss_pred CCcCCCCEEEEehhc--CCCcEEEEEEECCCCccCccccCC-CEEEEEEeCEEEEEE
Confidence 45555444 555554 568899999999999999999987 678889999877543
No 40
>1vj2_A Novel manganese-containing cupin TM1459; structural genomics, joint for structural genomics, JCSG; 1.65A {Thermotoga maritima} SCOP: b.82.1.10
Probab=80.06 E-value=2.1 Score=32.95 Aligned_cols=57 Identities=16% Similarity=0.188 Sum_probs=42.9
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+.+++..+...||+..+.|-|.. .=++.|++|+++-.. . + ....+.+|++-+|...
T Consensus 45 ~~~~~~~~~~~~pg~~~~~H~H~~-~e~~~Vl~G~~~~~i---~-~------------~~~~l~~Gd~i~ip~g 101 (126)
T 1vj2_A 45 APNFVMRLFTVEPGGLIDRHSHPW-EHEIFVLKGKLTVLK---E-Q------------GEETVEEGFYIFVEPN 101 (126)
T ss_dssp CSSEEEEEEEEEEEEEEEEECCSS-CEEEEEEESEEEEEC---S-S------------CEEEEETTEEEEECTT
T ss_pred CCCEEEEEEEECCCCcCCceeCCC-cEEEEEEEeEEEEEE---C-C------------EEEEECCCCEEEECCC
Confidence 568899999999999999999996 667889999887532 1 1 1245667777777654
No 41
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=79.96 E-value=4.5 Score=35.52 Aligned_cols=34 Identities=15% Similarity=0.073 Sum_probs=28.0
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
=.+.++-|.||+.-+.|.|.|... -||+|++.+.
T Consensus 146 E~v~l~r~~~G~~~~~~~hgG~Ei--lVL~G~~~d~ 179 (223)
T 3o14_A 146 ETVTHRKLEPGANLTSEAAGGIEV--LVLDGDVTVN 179 (223)
T ss_dssp CEEEEEEECTTCEEEECCSSCEEE--EEEEEEEEET
T ss_pred cEEEEEEECCCCccCCCCCCcEEE--EEEEeEEEEC
Confidence 345578999999999999977664 6999999864
No 42
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=78.55 E-value=3.3 Score=34.49 Aligned_cols=47 Identities=11% Similarity=0.067 Sum_probs=35.3
Q ss_pred ccceeeeeecC-CCcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 185 TLYTRNLVDAG-NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 185 t~YTRnlV~~i-~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
.+..|-.+..+ .+...+.++-|.||...|.|.|.+.. .+-||+|++.
T Consensus 27 ~Gv~~~~L~~d~~~g~~v~lvr~~pG~~~p~H~H~g~e-e~~VL~G~~~ 74 (159)
T 3ebr_A 27 NDVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTGTV-IVYTVQGSWR 74 (159)
T ss_dssp SSSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESSCE-EEEEEESCEE
T ss_pred CCEEEEEeeEcCCCCeEEEEEEECCCCCcccccCCCCE-EEEEEEeEEE
Confidence 45556666432 34567778889999999999998844 5669999987
No 43
>1fxz_A Glycinin G1; proglycinin, legumin, SEED storage protein, plant protein; 2.80A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ud1_A 1ucx_A
Probab=78.43 E-value=3.7 Score=40.14 Aligned_cols=63 Identities=10% Similarity=-0.002 Sum_probs=47.3
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
.+.+..+.-.||...+.|-|++++=|+.||+|++.-+...... . .....++.+|+|.||-..+
T Consensus 337 ~is~~~v~l~pGa~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~G-------~---~~~~~~l~~GDv~viP~G~ 399 (476)
T 1fxz_A 337 RLSAEFGSLRKNAMFVPHYNLNANSIIYALNGRALIQVVNCNG-------E---RVFDGELQEGRVLIVPQNF 399 (476)
T ss_dssp TCCEEEEEECTTCEEEEEEETTCCEEEEEEESEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTC
T ss_pred cceEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEecCC-------C---EEeeeEEcCCCEEEECCCC
Confidence 6778888999999999999999999999999998765554211 1 1123458888888876543
No 44
>2d5f_A Glycinin A3B4 subunit; soybean, globulin, 11S,SEED storage protein, plant; 1.90A {Glycine max} PDB: 2d5h_A 1od5_A
Probab=77.93 E-value=3.9 Score=40.13 Aligned_cols=62 Identities=8% Similarity=-0.048 Sum_probs=47.3
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..+..+.-.||...+.|-|.+++=++.||+|+++-....... . .....++.+|+|.||-..+
T Consensus 367 ls~a~v~l~pG~~~~pH~Hp~a~Ei~yVl~G~~~v~v~~~~g-------~---~~~~~~l~~GDv~vvP~G~ 428 (493)
T 2d5f_A 367 LSAQYVVLYRNGIYSPHWNLNANSVIYVTRGKGRVRVVNAQG-------N---AVFDGELRRGQLLVVPQNF 428 (493)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTC
T ss_pred eEEEEEEccCCceeeeeECCCCCEEEEEEeceEEEEEEcCCC-------C---EEEeEEEcCCCEEEECCCC
Confidence 678888899999999999999999999999998766554221 1 1123468889998886544
No 45
>2o1q_A Putative acetyl/propionyl-COA carboxylase, alpha; putative acetylacetone dioxygenase, structural genomics; HET: MSE PG4; 1.50A {Methylibium petroleiphilum} SCOP: b.82.1.21
Probab=77.72 E-value=1.9 Score=34.88 Aligned_cols=48 Identities=13% Similarity=0.041 Sum_probs=34.9
Q ss_pred ccceeeeeecCCC-cceeEEEeecCCCccccccCCCcceeeEeecceEEE
Q psy4445 185 TLYTRNLVDAGND-KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 185 t~YTRnlV~~i~~-~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E 233 (279)
.+..|..+..+.. ...+.++.|.||...|.|.|.+..- +-||+|++..
T Consensus 29 ~Gv~~~~L~~~~~~g~~~~~~~~~pG~~~p~H~H~~~ee-~~VL~G~~~~ 77 (145)
T 2o1q_A 29 GGIRWKLLHVSPEMGSWTAIFDCPAGSSFAAHVHVGPGE-YFLTKGKMDV 77 (145)
T ss_dssp SCCEEEEEEEETTTTEEEEEEEECTTEEECCEEESSCEE-EEEEEEEEEE
T ss_pred CCcEEEEeeECCCcccEEEEEEECCCCCCCccCCCCCEE-EEEEEeEEEE
Confidence 3445555543222 2357788999999999999987555 7899999884
No 46
>3c3v_A Arachin ARAH3 isoform; peanut allergen, allergy, glycinin; 1.73A {Arachis hypogaea}
Probab=76.37 E-value=4.3 Score=40.18 Aligned_cols=63 Identities=11% Similarity=-0.046 Sum_probs=47.2
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
...+..+.-.||...+.|-|++++=|+.||+|++.-+...... . ..-..++.+|+|.||-..+
T Consensus 371 ~is~a~v~L~PG~~~~pH~Hp~a~Ei~yVl~G~~~v~vv~~~G-------~---~~~~~~l~~GDv~viP~G~ 433 (510)
T 3c3v_A 371 GLSAEYGNLYRNALFVPHYNTNAHSIIYALRGRAHVQVVDSNG-------N---RVYDEELQEGHVLVVPQNF 433 (510)
T ss_dssp TCEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTC
T ss_pred eEEEEEEEecCCceecceECCCCCEEEEEEeCEEEEEEEeCCC-------C---EEEeEEEcCCcEEEECCCC
Confidence 5677888899999999999999999999999998776554211 1 1123458888888876543
No 47
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=75.70 E-value=8.4 Score=31.46 Aligned_cols=69 Identities=10% Similarity=0.050 Sum_probs=46.8
Q ss_pred ccceeeeee--cCCCcceeEEEeecCCCccc--cccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecC
Q psy4445 185 TLYTRNLVD--AGNDKFNLMILCWGEGHGSS--VHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKL 260 (279)
Q Consensus 185 t~YTRnlV~--~i~~~~elvll~W~pGQ~Sp--IHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~ 260 (279)
.+|++..+. .....+++..+...||..++ .|-|.. .=++.||+|+++-.. . + ....+.+
T Consensus 88 ~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~-~E~~~Vl~G~~~~~~---~-~------------~~~~l~~ 150 (192)
T 1y9q_A 88 LNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGV-IEYIHVLEGIMKVFF---D-E------------QWHELQQ 150 (192)
T ss_dssp TTEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTC-EEEEEEEESCEEEEE---T-T------------EEEEECT
T ss_pred CCEEEEEeccCCCCCcEEEEEEEECCCCCccCCCCCCCC-EEEEEEEEeEEEEEE---C-C------------EEEEeCC
Confidence 345555554 23678999999999999887 566654 557789999987532 1 1 1246778
Q ss_pred CCeeEEcCCC
Q psy4445 261 NEVCYINGKN 270 (279)
Q Consensus 261 geVtYIsD~i 270 (279)
|++-|++...
T Consensus 151 GD~i~i~~~~ 160 (192)
T 1y9q_A 151 GEHIRFFSDQ 160 (192)
T ss_dssp TCEEEEECSS
T ss_pred CCEEEEcCCC
Confidence 8888876643
No 48
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=75.61 E-value=6.7 Score=34.56 Aligned_cols=58 Identities=28% Similarity=0.355 Sum_probs=44.9
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+.|++..+.-.||...+-|-|....=++.||+|+++-+. .+ ....+.+|++-||...
T Consensus 43 ~~~~~~~~~~~~pg~~~~~h~H~~~~e~~~Vl~G~~~~~~----~~------------~~~~l~~Gd~~~~p~~ 100 (337)
T 1y3t_A 43 GDLFEIVLLSGGKGDAFPLHVHKDTHEGILVLDGKLELTL----DG------------ERYLLISGDYANIPAG 100 (337)
T ss_dssp TSSEEEEEEEECTTCEEEEEECTTCCEEEEEEESCEEEEE----TT------------EEEEECTTCEEEECTT
T ss_pred CCeEEEEEEEeCCCCCCCceeCCCceEEEEEEECEEEEEE----CC------------EEEEECCCCEEEECCC
Confidence 5689999999999999999999966788999999987653 11 1245777777777654
No 49
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=75.61 E-value=3.1 Score=35.47 Aligned_cols=45 Identities=16% Similarity=0.212 Sum_probs=35.1
Q ss_pred cceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 186 LYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 186 ~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
+..|-.+..+ +...+.++-|.||..-|-|.|.+. =+.-||+|++.
T Consensus 113 Gv~~~~L~~~-~~~~v~l~~~~pG~~~p~H~H~g~-E~~~VL~G~f~ 157 (195)
T 2q1z_B 113 GVRQAILPTG-GEAIARLLWIPGGQAVPDHGHRGL-ELTLVLQGAFR 157 (195)
T ss_dssp SCEEEEECCS-SSSEEEEEEECTTCBCCCCCCSSC-EEEEEEESEEE
T ss_pred CeEEEEEecC-CCcEEEEEEECCCCCCCCcCCCCe-EEEEEEEEEEE
Confidence 4556666543 466788999999999999999875 34579999977
No 50
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=75.01 E-value=3.9 Score=34.42 Aligned_cols=47 Identities=15% Similarity=0.114 Sum_probs=34.6
Q ss_pred cceeeeeec-CCCcceeEEEeecCCCccccccCCCcceeeEeecceEEE
Q psy4445 186 LYTRNLVDA-GNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 186 ~YTRnlV~~-i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E 233 (279)
+..|..+.. ....-.+.++-|.||...|.|.|.+ .=.+-||+|++..
T Consensus 29 GV~~~~L~~~~~~g~~v~lvr~~pG~~~p~H~H~g-~ee~~VL~G~f~~ 76 (165)
T 3cjx_A 29 GTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTG-TVHMYTISGCWYY 76 (165)
T ss_dssp TEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESS-CEEEEEEESEEEE
T ss_pred CEEEEEeEeCCCCCcEEEEEEECCCCcCCcccCCC-CEEEEEEEEEEEE
Confidence 445554542 2334567889999999999999988 4456699999885
No 51
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=74.86 E-value=6.6 Score=35.88 Aligned_cols=61 Identities=15% Similarity=0.147 Sum_probs=45.9
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+++..+.-.||...+.|-|.++.-++.||+|+++-+..... + . .....+.+|++-||...
T Consensus 256 ~~~~~~~~l~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i~~~~-g------~----~~~~~l~~GD~~~ip~~ 316 (385)
T 1j58_A 256 TIASALVTVEPGAMRELHWHPNTHEWQYYISGKARMTVFASD-G------H----ARTFNYQAGDVGYVPFA 316 (385)
T ss_dssp SCEEEEEEECTTCEEEEEECSSSCEEEEEEESEEEEEEEEET-T------E----EEEEEEESSCEEEECTT
T ss_pred ceEEEEEEECCCcccCceeCCCCCEEEEEEeCeEEEEEEcCC-C------c----EEEEEEcCCCEEEECCC
Confidence 689999999999999999999978889999999876654211 0 0 12346777888777654
No 52
>2o8q_A Hypothetical protein; cpuin-like fold, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.55A {Burkholderia xenovorans}
Probab=74.71 E-value=6 Score=30.24 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=24.9
Q ss_pred CCcceeEEEee--cCCCccccccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCW--GEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W--~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
++.+.+.++.. .||...+.|-|....=++.|++|+++-.
T Consensus 38 ~g~~~~~~~~~~~~~g~~~~~H~H~~~~E~~~vl~G~~~~~ 78 (134)
T 2o8q_A 38 GGMFGAHVIRAIPGKEAKPTWHTHTVGFQLFYVLRGWVEFE 78 (134)
T ss_dssp TTSCEEEEEEECC-----CCCEEECCSCEEEEEEESEEEEE
T ss_pred CCceEEEEEEEecCCCCCCCCEECCCCcEEEEEEeCEEEEE
Confidence 45555334433 4899999999998777888999998753
No 53
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=73.91 E-value=8.8 Score=34.54 Aligned_cols=61 Identities=23% Similarity=0.280 Sum_probs=47.0
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+++..+.-.||...+.|-|.++.=++.|++|+++-+.+.. ++ . .....+.+|++-||...
T Consensus 233 ~~~~~~~~l~pg~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~--~g-----~----~~~~~l~~GD~~~ip~~ 293 (361)
T 2vqa_A 233 NMTGALIHLEPGAMRQLHWHPNADEWQYVLDGEMDLTVFAS--EG-----K----ASVSRLQQGDVGYVPKG 293 (361)
T ss_dssp TCEEEEEEECTTCEEEEEECSSCCEEEEEEESCEEEEEECS--TT-----C----EEEEEECTTCEEEECTT
T ss_pred cceEEEEEECCCcccccccCCCCCEEEEEEeCEEEEEEEcC--CC-----c----EEEEEECCCCEEEECCC
Confidence 58899999999999999999987888999999988766542 11 1 12356788888887654
No 54
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=73.23 E-value=3.3 Score=39.54 Aligned_cols=59 Identities=17% Similarity=0.110 Sum_probs=44.2
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYING 268 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD 268 (279)
+.+.+..+.-.||...+.| |.++.-++.||+|+.+-+.... ... ....+++|+|-||-.
T Consensus 47 ~~~s~~~~~l~PGg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~~-----------~~~~l~~GDv~~iP~ 105 (416)
T 1uij_A 47 RDYRIVQFQSKPNTILLPH-HADADFLLFVLSGRAILTLVNN-DDR-----------DSYNLHPGDAQRIPA 105 (416)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESCEEEEEECS-SCE-----------EEEEECTTEEEEECT
T ss_pred ccEEEEEEEeccCcCcccc-cCCCceEEEEEeeEEEEEEEEC-CCC-----------eEEEecCCCEEEECC
Confidence 4478888899999999999 9999999999999988776543 110 124566666666643
No 55
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=73.03 E-value=6.2 Score=39.44 Aligned_cols=63 Identities=10% Similarity=0.023 Sum_probs=48.6
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..++..+.-.||..-+.|-|++++=|+.|++|+++-+...... . .....+|.+|+|.||--.+
T Consensus 393 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~G-------~---~v~~~~L~~GDV~v~P~G~ 455 (531)
T 3fz3_A 393 RLSAERGFFYRNGIYSPHWNVNAHSVVYVIRGNARVQVVNENG-------D---AILDQEVQQGQLFIVPQNH 455 (531)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTC
T ss_pred ceeEEEEEeecCccccceEcCCCCEEEEEEeCcEEEEEEeCCC-------c---EEEEEEecCCeEEEECCCC
Confidence 4677788889999999999999999999999999887765321 1 1124568889888876543
No 56
>2e9q_A 11S globulin subunit beta; cucubitin, pumpkin SEED storage globulin, plant protein; 2.20A {Cucurbita maxima} PDB: 2evx_A
Probab=71.51 E-value=7.3 Score=37.89 Aligned_cols=64 Identities=9% Similarity=-0.046 Sum_probs=48.8
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
..++..+.-.||...+.|-|++++=|+.|++|+..-+...... . ..-..++.+|+|-||--.++
T Consensus 321 ~iS~a~v~l~pG~~~~pH~Hp~A~Ei~yV~~G~~~v~vv~~~g-------~---~~~~~~l~~GDv~v~P~G~~ 384 (459)
T 2e9q_A 321 RLSAERGVLYSNAMVAPHYTVNSHSVMYATRGNARVQVVDNFG-------Q---SVFDGEVREGQVLMIPQNFV 384 (459)
T ss_dssp TCEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTCE
T ss_pred ccceEEEEeeCCcCccceECCCCCEEEEEEeeEEEEEEEeCCC-------C---EEEeeEEeCCcEEEECCCCE
Confidence 5667777889999999999999999999999998887765321 1 12234688999988865443
No 57
>4i4a_A Similar to unknown protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.35A {Photorhabdus luminescens subsp}
Probab=71.25 E-value=11 Score=28.39 Aligned_cols=57 Identities=14% Similarity=0.082 Sum_probs=41.2
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
+..|++....-.||+.++.|-|.. .=++-|++|+++-.. .+ ....+.+|++-+|...
T Consensus 31 ~~~~~~~~~~~~pg~~~~~H~H~~-~Ei~~v~~G~~~~~i----~~------------~~~~l~~Gd~~~i~~~ 87 (128)
T 4i4a_A 31 NTPFGGAWCIVRPETKSFRHSHNE-YELFIVIQGNAIIRI----ND------------EDFPVTKGDLIIIPLD 87 (128)
T ss_dssp CCSSEEEEEEECTTEECCCBCCSS-EEEEEEEESEEEEEE----TT------------EEEEEETTCEEEECTT
T ss_pred CCCcEEEEEEECCCCccCCEecCC-eEEEEEEeCEEEEEE----CC------------EEEEECCCcEEEECCC
Confidence 456777777888999999999964 779999999876533 11 1345667777776654
No 58
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=70.79 E-value=4 Score=39.30 Aligned_cols=40 Identities=20% Similarity=0.223 Sum_probs=35.5
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeec
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYA 237 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~ 237 (279)
+.+.++.+.-.||...+.| |.++.-|+.||+|+.+-+...
T Consensus 59 ~~~s~~~~~l~PGg~~~pH-h~~a~Ei~yVl~G~g~v~~v~ 98 (434)
T 2ea7_A 59 ENYRVVEFKSKPNTLLLPH-HADADFLLVVLNGTAVLTLVN 98 (434)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred ccEEEEEEEecCCcCccCc-cCCCceEEEEEecEEEEEEEe
Confidence 4488888999999999999 999999999999998877664
No 59
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=69.38 E-value=7.2 Score=35.41 Aligned_cols=59 Identities=14% Similarity=0.217 Sum_probs=44.4
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
.+.|++.++.-.||..|+.|.|.+ .-++.||+|+++.+. .++ ...++++|+..|+....
T Consensus 67 G~~f~~~lv~l~PGg~s~~~~h~~-EEfiyVleG~l~l~l----~~g-----------~~~~L~~Gds~y~p~~~ 125 (266)
T 4e2q_A 67 GSHFVMYLAKMKEMSSSGLPPQDI-ERLIFVVEGAVTLTN----TSS-----------SSKKLTVDSYAYLPPNF 125 (266)
T ss_dssp TCSSEEEEEEECSSEECCCCCTTE-EEEEEEEEECEEEEC------C-----------CCEEECTTEEEEECTTC
T ss_pred CCcEEEEEEEECcCCcCCCCCCCC-eEEEEEEEEEEEEEE----CCC-----------cEEEEcCCCEEEECCCC
Confidence 468999999999999999998876 667789999987742 101 23567788888876543
No 60
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=69.19 E-value=5.4 Score=33.74 Aligned_cols=54 Identities=9% Similarity=0.033 Sum_probs=38.9
Q ss_pred cccccccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeec--ceEEEE
Q psy4445 180 NKVSCTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLD--GCLTET 234 (279)
Q Consensus 180 nk~s~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~--G~l~E~ 234 (279)
..-.+.+.+|.++.. .+.|-+-+..+.+|..++.|-|....=++.||+ |+.+-.
T Consensus 27 ~~~~~~G~srR~l~~-~~~fp~sv~~v~~g~~~~~H~H~~~~E~~yVLe~~G~g~v~ 82 (157)
T 4h7l_A 27 AVACPCGWAQRAFGH-DAGTSVSVHYTQITKAARTHYHREHQEIYVVLDHAAHATIE 82 (157)
T ss_dssp CEEETTEEEEEESCG-GGCCSCEEEEEEECSCCCCBBCSSCEEEEEEEEECTTCEEE
T ss_pred CccCCCCeeeEEeEc-CCCCcEEEEEEeCCCCccceECCCCcEEEEEEecCcEEEEE
Confidence 334568888887765 344555555677888999999987666888999 876543
No 61
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=68.82 E-value=5.1 Score=34.03 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=33.3
Q ss_pred CCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 195 GNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 195 i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
......+..+...||..++.|.|.+.. ++.||+|+++-+
T Consensus 75 ~~~G~~~~~v~l~PG~~~~~H~H~~eE-~~~VLeGel~l~ 113 (172)
T 3es1_A 75 LDGGSVIRVVDMLPGKESPMHRTNSID-YGIVLEGEIELE 113 (172)
T ss_dssp TTCSEEEEEEEECTTCBCCCBCCSEEE-EEEEEESCEEEE
T ss_pred CCCCeEEEEEEECCCCCCCCeecCceE-EEEEEeCEEEEE
Confidence 467888999999999999999998755 569999998753
No 62
>2xlg_A SLL1785 protein, CUCA; metal binding protein, cupin; 1.80A {Synechocystis SP} PDB: 2xl7_A 2xl9_A 2xlf_A* 2xla_A
Probab=68.38 E-value=9.2 Score=33.84 Aligned_cols=40 Identities=15% Similarity=0.075 Sum_probs=33.7
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEe
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~r 235 (279)
...|+++.+.-.||...+.|-|....=++.||+|+++-..
T Consensus 40 ~~~~~~~~~~~~PG~~~~~H~H~~~~E~~yVLeG~~~~~v 79 (239)
T 2xlg_A 40 DIGFAIAHAQIPPGGGPMPHIHYFINEWFWTPEGGIELFH 79 (239)
T ss_dssp TEEEEEEEEEECTTCSCCSEEESSEEEEEEETTCCCEEEE
T ss_pred CCCEEEEEEEECCCCcCCCeECCCccEEEEEEEeEEEEEE
Confidence 4678888888899999999999976778899999887644
No 63
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=68.04 E-value=9.4 Score=30.46 Aligned_cols=68 Identities=13% Similarity=0.154 Sum_probs=44.5
Q ss_pred cccceeeeeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCe
Q psy4445 184 CTLYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEV 263 (279)
Q Consensus 184 ~t~YTRnlV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geV 263 (279)
...+.+.++......+++.++.|.|| ..+.| ....=++.||+|+++-+. .+ ....+.+|++
T Consensus 42 ~~~~~~~L~~~~~~~~~~~~~~~~pG-~~~~h--~~~~E~~~VLeG~~~l~~----~g------------~~~~l~~GD~ 102 (133)
T 2pyt_A 42 CVGLTDLVTEQDGSSMAAGFMQWDNA-FFPWT--LNYDEIDMVLEGELHVRH----EG------------ETMIAKAGDV 102 (133)
T ss_dssp CCEEEEEECGGGTCSSEEEEEEEEEE-EEEEE--CSSEEEEEEEEEEEEEEE----TT------------EEEEEETTCE
T ss_pred ceEEEEEEecCCCCcEEEEEEEECCC-Ccccc--CCCCEEEEEEECEEEEEE----CC------------EEEEECCCcE
Confidence 34456666665556899999999999 33344 333556779999988653 11 1235777887
Q ss_pred eEEcCCC
Q psy4445 264 CYINGKN 270 (279)
Q Consensus 264 tYIsD~i 270 (279)
-||....
T Consensus 103 i~~p~g~ 109 (133)
T 2pyt_A 103 MFIPKGS 109 (133)
T ss_dssp EEECTTC
T ss_pred EEECCCC
Confidence 7776543
No 64
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=67.77 E-value=14 Score=33.13 Aligned_cols=62 Identities=13% Similarity=0.107 Sum_probs=45.6
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
..+++..+.-.||...+.|-|.++.=++.|++|+++-+....... .....+++|++-||...
T Consensus 50 ~~~~~~~~~l~pg~~~~~H~H~~~~E~~yVl~G~~~~~v~~~~g~-----------~~~~~l~~GD~~~ip~g 111 (361)
T 2vqa_A 50 KGMAGVYMSLEPGAIRELHWHANAAEWAYVMEGRTRITLTSPEGK-----------VEIADVDKGGLWYFPRG 111 (361)
T ss_dssp CSCEEEEEEECTTCEEEEEECTTCCEEEEEEESEEEEEEECTTSC-----------EEEEEEETTEEEEECTT
T ss_pred cceeeEEEEEcCCCCCCceeCCCCCEEEEEEEeEEEEEEEeCCCc-----------EEEEEEcCCCEEEECCC
Confidence 345677777789999899999977899999999988776653211 01246788888887654
No 65
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=66.46 E-value=18 Score=28.16 Aligned_cols=67 Identities=16% Similarity=0.209 Sum_probs=44.7
Q ss_pred cceeeeee-cCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCee
Q psy4445 186 LYTRNLVD-AGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVC 264 (279)
Q Consensus 186 ~YTRnlV~-~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVt 264 (279)
-|...++. .....+++..+...||+..+-| ....=++.||+|+++-+. .+ ....+++|++-
T Consensus 26 ~~~g~v~s~~~~~~~~~~~~~~~pG~~~~~H--~~~~E~~~Vl~G~~~~~~----~g------------~~~~l~~GD~v 87 (119)
T 3lwc_A 26 ISVGNLVDERHGGPITIGYGRYAPGQSLTET--MAVDDVMIVLEGRLSVST----DG------------ETVTAGPGEIV 87 (119)
T ss_dssp EEEEEC------CCCEEEEEEECTTCEEEEE--CSSEEEEEEEEEEEEEEE----TT------------EEEEECTTCEE
T ss_pred EEEEEeecCCCCCCEEEEEEEECCCCCcCcc--CCCCEEEEEEeCEEEEEE----CC------------EEEEECCCCEE
Confidence 34555554 2356788888999999876666 466788899999988765 11 13467888888
Q ss_pred EEcCCC
Q psy4445 265 YINGKN 270 (279)
Q Consensus 265 YIsD~i 270 (279)
||....
T Consensus 88 ~ip~g~ 93 (119)
T 3lwc_A 88 YMPKGE 93 (119)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 876554
No 66
>3qac_A 11S globulin SEED storage protein; 11S SEED storage protein (globulins) family, SEED storage PR plant protein; 2.27A {Amaranthus hypochondriacus}
Probab=64.98 E-value=12 Score=36.66 Aligned_cols=63 Identities=10% Similarity=-0.049 Sum_probs=49.3
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
.++..+.-.||..-+.|-|++++=|+.|++|++.-+.+.... . ..-..+|++|+|-+|--.+.
T Consensus 323 iS~a~v~l~pGgm~~PHwHp~A~Ei~yV~~G~~~v~vV~~~g-------~---~~f~~~l~~GDVfvvP~g~~ 385 (465)
T 3qac_A 323 LSAAKGVLYRNAMMAPHYNLNAHNIMYCVRGRGRIQIVNDQG-------Q---SVFDEELSRGQLVVVPQNFA 385 (465)
T ss_dssp CEEEEEEECTTCEEEEEEESSCCEEEEEEEEEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTCE
T ss_pred eeEEEEEecCCcEeeeEECCCCCEEEEEEeCCEEEEEEeCCC-------c---EEEEEEecCCeEEEECCCcE
Confidence 466677889999999999999999999999999887776321 1 12345688999998876654
No 67
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=64.98 E-value=20 Score=31.02 Aligned_cols=68 Identities=12% Similarity=0.113 Sum_probs=46.6
Q ss_pred ccceeeeee--cCCCcceeEEEeecCCCcccc-ccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCC
Q psy4445 185 TLYTRNLVD--AGNDKFNLMILCWGEGHGSSV-HDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLN 261 (279)
Q Consensus 185 t~YTRnlV~--~i~~~~elvll~W~pGQ~SpI-HDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~g 261 (279)
+++++..|. .....+++..+.-.||..++. |-|...| .+.||+|++.-+. . + ....+.+|
T Consensus 149 ~g~~~r~l~p~~~~~~~~~~~~tl~PG~~~~~~~~h~~ee-~~~vLeG~~~~~~---~-~------------~~~~l~~G 211 (246)
T 1sfn_A 149 DHLIARKLLPDEPAFDFMVSTMSFAPGASLPYAEVHYMEH-GLLMLEGEGLYKL---E-E------------NYYPVTAG 211 (246)
T ss_dssp TTEEEEECSCCCTTCSEEEEEEEECTTCBCSSCBCCSSCE-EEEEEECEEEEEE---T-T------------EEEEEETT
T ss_pred CCeEEEEeCCCccCCCeEEEEEEECCCCccCcccCCCceE-EEEEEECEEEEEE---C-C------------EEEEcCCC
Confidence 345555543 235688999999999999996 6677766 5779999876543 1 1 12357777
Q ss_pred CeeEEcCC
Q psy4445 262 EVCYINGK 269 (279)
Q Consensus 262 eVtYIsD~ 269 (279)
++.|+...
T Consensus 212 D~~~~~~~ 219 (246)
T 1sfn_A 212 DIIWMGAH 219 (246)
T ss_dssp CEEEECTT
T ss_pred CEEEECCC
Confidence 77777654
No 68
>3ksc_A LEGA class, prolegumin; PEA prolegumin, 11S SEED storage protein, pisum sativum L., SEED storage protein, storage protein, plant protein; 2.61A {Pisum sativum}
Probab=64.62 E-value=11 Score=37.10 Aligned_cols=63 Identities=8% Similarity=-0.033 Sum_probs=48.5
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
.++..+.-.||..-+.|-|++++=|+.|++|++.-+...... . ..-..+|.+|+|-|+--.+.
T Consensus 358 iS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g-------~---~~f~~~l~~GDV~v~P~G~~ 420 (496)
T 3ksc_A 358 LSAEHGSLHKNAMFVPHYNLNANSIIYALKGRARLQVVNCNG-------N---TVFDGELEAGRALTVPQNYA 420 (496)
T ss_dssp CEEEEEEEETTCEEEEEEESSCCEEEEEEESEEEEEEECTTS-------C---EEEEEEEETTCEEEECTTCE
T ss_pred eeEEEEEeeCCeEECCeeCCCCCEEEEEEeceEEEEEEeCCC-------c---EEEEEEecCCeEEEECCCCE
Confidence 367778889999999999999999999999999987775321 1 12234688899888765544
No 69
>3kgl_A Cruciferin; 11S SEED globulin, rapeseed, SEED storage protein, storage protein, plant protein; 2.98A {Brassica napus}
Probab=64.47 E-value=10 Score=37.12 Aligned_cols=64 Identities=9% Similarity=-0.052 Sum_probs=49.1
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
..++..+.-.||..-+.|-|++++=|+.|++|+..-+....... ..-...+++|+|-|+--.++
T Consensus 322 giS~a~v~L~pGgm~~PHwHp~A~Ei~yVl~G~~rv~~V~~~g~----------~~f~~~l~~GDV~v~P~G~~ 385 (466)
T 3kgl_A 322 RLSALRGSIRQNAMVLPQWNANANAVLYVTDGEAHVQVVNDNGD----------RVFDGQVSQGQLLSIPQGFS 385 (466)
T ss_dssp TCEEEEEEEETTEEEEEEEESSCCEEEEEEESEEEEEEECTTSC----------EEEEEEEETTCEEEECTTCE
T ss_pred ceeeEEEEeecCcEeeeeECCCCCEEEEEEeceEEEEEEeCCCc----------EEEEeEecCCcEEEECCCCe
Confidence 46677788899999999999999999999999998877754211 12345688888888755443
No 70
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=63.83 E-value=12 Score=32.59 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=42.7
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
...+++..+...||...+.|-|.+..=++.||+|+++-.. . + ....+.+|++-||...
T Consensus 176 ~~~~~~~~~~~~pG~~~~~h~H~~~~E~~~Vl~G~~~~~i---~-~------------~~~~l~~GD~i~~~~~ 233 (261)
T 1rc6_A 176 GFDMNMHILSFAPGASHGYIETHVQEHGAYILSGQGVYNL---D-N------------NWIPVKKGDYIFMGAY 233 (261)
T ss_dssp TCSEEEEEEEECTTCCBEEEEEESSCEEEEEEESEEEEES---S-S------------CEEEEETTCEEEECSS
T ss_pred CCceEEEEEEECCCCccCcccCCCceEEEEEEEeEEEEEE---C-C------------EEEEeCCCCEEEECCC
Confidence 4567889999999999999999754557789999987532 1 1 1345777887777654
No 71
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=63.78 E-value=6.2 Score=38.11 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=45.6
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
+.+++..+.=.||...+.| |.++.-|+.||+|+.+-+.... .. . ....+++|+|-|+-..
T Consensus 84 g~~s~~~~~l~Pgg~~~pH-h~~a~E~~yVl~G~g~v~~v~~-~~-------~----~~~~l~~GDv~~~P~G 143 (445)
T 2cav_A 84 RDYRVLEYCSKPNTLLLPH-HSDSDLLVLVLEGQAILVLVNP-DG-------R----DTYKLDQGDAIKIQAG 143 (445)
T ss_dssp TTEEEEEEEECSSEEEEEE-EESSEEEEEEEESEEEEEEEET-TE-------E----EEEEEETTEEEEECTT
T ss_pred CcEEEEEEEECCCcCccCc-CCCCceEEEEEeCEEEEEEEeC-CC-------C----EEEEecCCCEEEECCC
Confidence 4478888899999999999 9999999999999988876652 11 1 1345777777776543
No 72
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=63.52 E-value=22 Score=31.18 Aligned_cols=38 Identities=18% Similarity=0.265 Sum_probs=31.1
Q ss_pred CCcceeEEEeecCCCcccc-ccCCCcceeeEeecceEEEE
Q psy4445 196 NDKFNLMILCWGEGHGSSV-HDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpI-HDH~gshC~~kVL~G~l~E~ 234 (279)
...+++..+...||...+. |-|...+ ++.||+|+++-.
T Consensus 179 ~~~~~~~~~~l~pg~~~~~~H~H~~~E-~~yVl~G~~~~~ 217 (274)
T 1sef_A 179 DFDMNMHILSFEPGASHAYIETHVQEH-GAYLISGQGMYN 217 (274)
T ss_dssp TCSEEEEEEEECTTCBCSSCBCCSCCE-EEEEEECEEEEE
T ss_pred CCCEEEEEEEECCCCccCcceeccCeE-EEEEEeCEEEEE
Confidence 4578888999999999998 9998765 457999987754
No 73
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=62.36 E-value=23 Score=29.58 Aligned_cols=64 Identities=16% Similarity=0.019 Sum_probs=43.0
Q ss_pred CCcceeEEEeecCCCc------cccccCC--CcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEc
Q psy4445 196 NDKFNLMILCWGEGHG------SSVHDHA--DAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYIN 267 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~------SpIHDH~--gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIs 267 (279)
.+..++.+..-.||.. ++.|-|. +..=++-||+|++.-..=... +. .....+.+|++-+|.
T Consensus 64 ~~~l~~~~~~l~PG~~~~E~~~~~~H~H~~~~~~E~~~Vl~G~~~~~i~~~~-------g~----~~~~~l~~GD~v~ip 132 (190)
T 1x82_A 64 EGDLNFATTVLYPGKVGKEFFFTKGHFHAKLDRAEVYVALKGKGGMLLQTPE-------GD----AKWISMEPGTVVYVP 132 (190)
T ss_dssp TTCEEEEEEEECCCEETTEECBCCCBBCSSTTCCEEEEEEESCEEEEEECTT-------CC----EEEEEECTTCEEEEC
T ss_pred CCCeEEEEEEECCCcCCCcccCCCCeECCCCCCCEEEEEEcCEEEEEEcCcC-------Cc----EEEEEECCCcEEEEC
Confidence 3466777778899998 8889997 456788899998775432110 10 112467888888877
Q ss_pred CCC
Q psy4445 268 GKN 270 (279)
Q Consensus 268 D~i 270 (279)
...
T Consensus 133 ~g~ 135 (190)
T 1x82_A 133 PYW 135 (190)
T ss_dssp TTC
T ss_pred CCC
Confidence 643
No 74
>3h8u_A Uncharacterized conserved protein with double-STR beta-helix domain; YP_001338853.1; HET: 2PE; 1.80A {Klebsiella pneumoniae subsp}
Probab=61.74 E-value=6 Score=29.80 Aligned_cols=52 Identities=13% Similarity=0.193 Sum_probs=32.9
Q ss_pred cccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCC-Ccee--eeecc
Q psy4445 118 WRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHAD-AHCF--MTNET 170 (279)
Q Consensus 118 W~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~-ahC~--~~g~~ 170 (279)
+..+..+++..-.|.++.. ++.+.+..+...||+..+.|.|.+ ...+ ++|++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~~e~~~Vl~G~~ 71 (125)
T 3h8u_A 17 VDEYVRPSNGEPIRSVVLE-TNDSVVVVWHAHPGQEIASHVHPHGQDTWTVISGEA 71 (125)
T ss_dssp HHHHCCCCSSSCCCEEEEE-CSSCEEEEEEECTTCEECCC-CTTCEEEEEEEECEE
T ss_pred hhHhhccCCCCcEEEEEEc-CCCEEEEEEEECCCCcCCcccCCCCeEEEEEEEeEE
Confidence 3444444555444545543 456788888889999999999997 4444 24544
No 75
>3o14_A Anti-ecfsigma factor, CHRR; cupin, structural genomics, joint center for structura genomics, JCSG, protein structure initiative; HET: MSE; 1.70A {Marinobacter aquaeolei}
Probab=61.52 E-value=9 Score=33.57 Aligned_cols=48 Identities=21% Similarity=0.223 Sum_probs=35.7
Q ss_pred ccceeeeeecCC--CcceeEEEeecCCCccccccCCCcceeeEeecceEEE
Q psy4445 185 TLYTRNLVDAGN--DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 185 t~YTRnlV~~i~--~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E 233 (279)
.+..|-.+..+. ....+.++-|.||...|.|.|.+ .=.+-||+|++..
T Consensus 27 ~Gv~~~~L~~~~~e~g~~~~lvr~~pG~~~p~H~H~g-~Ee~~VL~G~f~d 76 (223)
T 3o14_A 27 KGVERRMLDRIGGEVARATSIVRYAPGSRFSAHTHDG-GEEFIVLDGVFQD 76 (223)
T ss_dssp TTEEEEEEEEESSSSCEEEEEEEECTTEECCCEECTT-CEEEEEEEEEEEE
T ss_pred CCEEEEEeecCCCccccEEEEEEECCCCCcccccCCC-CEEEEEEEeEEEE
Confidence 355666665332 23457788999999999999987 5567899999875
No 76
>2y0o_A Probable D-lyxose ketol-isomerase; carbohydrate metabolism, metal-binding, sugar ISO stress response; HET: MSE; 1.23A {Bacillus subtilis subsp}
Probab=60.01 E-value=25 Score=30.12 Aligned_cols=68 Identities=13% Similarity=0.042 Sum_probs=42.6
Q ss_pred cceeEEEeecCCCccccccCCC-------cceeeEeecceEEEEeecCCCCC-------CCCCCCcceeecceeecCCCe
Q psy4445 198 KFNLMILCWGEGHGSSVHDHAD-------AHCFMKMLDGCLTETRYAWPQTD-------EDGEEKPLQVIGKSPLKLNEV 263 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~g-------shC~~kVL~G~l~E~rY~~p~~~-------~~g~~~pL~~~~~~~l~~geV 263 (279)
+|..-.|.=.|||.+|.|-|.. +.-|+ |+.|.++... ..... .+|....+++.....+++|+.
T Consensus 52 ~Y~~K~l~l~pGQ~~P~H~H~~~~~~~gK~E~~i-vr~G~v~l~~--~g~~~~~~~v~v~dg~~~~~~a~~~i~L~pGes 128 (175)
T 2y0o_A 52 RYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFR-CRYGKVYLYV--EGEKTPLPKVLPPQEDREHYTVWHEIELEPGGQ 128 (175)
T ss_dssp SEEEEEEEECTTCEEEEEECCCCTTSCCCCEEEE-EEEEEEEEEE--SSSCCSSCSCCCCGGGGGGCCCCEEEEECTTCE
T ss_pred CceEEEEEECCCCcCCceECCCCCCCCCCceeEE-EecCEEEEEE--CCccccCcceeccCCceeeecCCcEEEECCCCE
Confidence 4666667779999999999996 34454 8899866533 21110 011122344455567888888
Q ss_pred eEEcC
Q psy4445 264 CYING 268 (279)
Q Consensus 264 tYIsD 268 (279)
-+|-+
T Consensus 129 vtIpp 133 (175)
T 2y0o_A 129 YTIPP 133 (175)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 87764
No 77
>2cav_A Protein (canavalin); vicilin, 7S SEED protein, domain duplication, swiss roll, PL protein; 2.00A {Canavalia ensiformis} SCOP: b.82.1.2 b.82.1.2 PDB: 2cau_A 1cau_B 1cav_B 1caw_B 1cax_B
Probab=58.51 E-value=15 Score=35.43 Aligned_cols=71 Identities=17% Similarity=0.066 Sum_probs=48.3
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCC-CCCCCcceeecceeecCCCeeEEcCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDE-DGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~-~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
..++..+.-.||..-+.|-|++++=|+.|++|+..-.......... +++++.. ......+++|+|-+|--.
T Consensus 280 ~is~~~v~l~pg~m~~PH~hp~A~ei~~V~~G~~~v~vv~~~~~~~~~~~g~~~-~~~~~~l~~GdV~vvP~g 351 (445)
T 2cav_A 280 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVELVGLEQQQQQGLESMQL-RRYAATLSEGDIIVIPSS 351 (445)
T ss_dssp TEEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEC-----------CC-EEEEEEECTTCEEEECTT
T ss_pred CCceEEEEeeCCceeeeEECCCCcEEEEEEeeEEEEEEEeCCCcccccccCcce-EEEEeEecCCcEEEEcCC
Confidence 4566677889999999999999999999999999888876532100 0001111 123467899999887543
No 78
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=57.77 E-value=10 Score=33.72 Aligned_cols=39 Identities=21% Similarity=0.296 Sum_probs=32.1
Q ss_pred CCcceeEEEeecCCCcc--ccccCCCcceeeEeecceEEEEe
Q psy4445 196 NDKFNLMILCWGEGHGS--SVHDHADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~S--pIHDH~gshC~~kVL~G~l~E~r 235 (279)
.+.+++..+...||+.+ +-|.|.+ .=++.||+|+++-+.
T Consensus 65 ~~~~~~~~~~l~PG~~~~~~~h~H~~-eE~~~Vl~G~l~v~v 105 (278)
T 1sq4_A 65 AETFSQYIVELAPNGGSDKPEQDPNA-EAVLFVVEGELSLTL 105 (278)
T ss_dssp CCSCEEEEEEEEEEEEESSCCCCTTE-EEEEEEEESCEEEEE
T ss_pred CCcEEEEEEEECCCCccCCCCcCCCc-eEEEEEEeCEEEEEE
Confidence 57899999999999887 6788875 667889999987643
No 79
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=56.26 E-value=26 Score=24.77 Aligned_cols=53 Identities=17% Similarity=0.215 Sum_probs=34.3
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
+.+.+..+. +..+.|.|....-++-|++|+++-.. . + ....+.+|++-+|...
T Consensus 31 ~~~~~~~~~--~~~~~H~H~~~~e~~~v~~G~~~~~~---~-~------------~~~~l~~Gd~~~ip~~ 83 (102)
T 3d82_A 31 YQFKLVKVE--GEFVWHEHADTDEVFIVMEGTLQIAF---R-D------------QNITLQAGEMYVIPKG 83 (102)
T ss_dssp EEEEEEEEE--EECCCBCCTTCCEEEEEEESEEEEEC---S-S------------CEEEEETTEEEEECTT
T ss_pred CEEEEEEEC--CCCCceeCCCCcEEEEEEeCEEEEEE---C-C------------EEEEEcCCCEEEECCC
Confidence 344444443 35789999986778999999986532 1 1 1345677777777654
No 80
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=54.72 E-value=33 Score=25.91 Aligned_cols=59 Identities=7% Similarity=0.122 Sum_probs=38.8
Q ss_pred CCcceeEEEeecCCCcccc---ccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 196 NDKFNLMILCWGEGHGSSV---HDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpI---HDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
.+.|.+..+ +.+|+.++- |.|.. .=++.||+|+++-+. . + ..+ ...+.+|+.-||....
T Consensus 28 ~~~~~i~~i-~~~g~~~~~~~~~~~~~-~E~~~Vl~G~~~l~~-~---~-----~~~-----~~~l~~Gd~i~ipa~~ 89 (112)
T 2opk_A 28 RKGLKIERI-ISNGQASPPGFWYDSPQ-DEWVMVVSGSAGIEC-E---G-----DTA-----PRVMRPGDWLHVPAHC 89 (112)
T ss_dssp ETTEEEEEE-EESSCCCCTTCCBCCSS-EEEEEEEESCEEEEE-T---T-----CSS-----CEEECTTEEEEECTTC
T ss_pred CCCEEEEEE-EeCCccCCCCccccCCc-cEEEEEEeCeEEEEE-C---C-----EEE-----EEEECCCCEEEECCCC
Confidence 456776655 588988877 67776 566789999887642 1 1 000 1468888888887544
No 81
>2i45_A Hypothetical protein; neisseria meningitidis cupin domain, structural genomics, PS protein structure initiative; 2.50A {Neisseria meningitidis}
Probab=54.65 E-value=16 Score=26.67 Aligned_cols=52 Identities=13% Similarity=0.153 Sum_probs=32.8
Q ss_pred EEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 202 MILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 202 vll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
+.+...||. .+-|-|.+..=++.|++|+++-.. ... ....+.+|++.+|...
T Consensus 31 ~~~~~~~g~-~~~H~H~~~~E~~~Vl~G~~~~~~---~~~------------~~~~l~~Gd~~~ip~~ 82 (107)
T 2i45_A 31 FHLVKLLGD-YGWHTHGYSDKVLFAVEGDMAVDF---ADG------------GSMTIREGEMAVVPKS 82 (107)
T ss_dssp EEEEEEEEE-CCCBCC--CCEEEEESSSCEEEEE---TTS------------CEEEECTTEEEEECTT
T ss_pred EEEEECCCC-CcceeCCCCCEEEEEEeCEEEEEE---CCC------------cEEEECCCCEEEECCC
Confidence 334556786 568999886777889999987532 110 1346777777777654
No 82
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=54.55 E-value=25 Score=32.00 Aligned_cols=62 Identities=11% Similarity=0.059 Sum_probs=45.3
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..+.+..+.-.||...+.|-|. ..-++.|++|+++-+.... ++ .. ....+.+|++-||....
T Consensus 77 ~~~~~~~~~l~pg~~~~~H~H~-~~E~~~Vl~G~~~~~~~~~--~g-----~~----~~~~l~~GD~~~ip~g~ 138 (385)
T 1j58_A 77 ENLASVNMRLKPGAIRELHWHK-EAEWAYMIYGSARVTIVDE--KG-----RS----FIDDVGEGDLWYFPSGL 138 (385)
T ss_dssp SSCEEEEEEECTTCEEEEEEES-SCEEEEEEEEEEEEEEECT--TS-----CE----EEEEEETTEEEEECTTC
T ss_pred CceEEEEEEECCCCCCCCccCC-hheEEEEEeeeEEEEEEeC--CC-----cE----EEEEeCCCCEEEECCCC
Confidence 4678888888999999999999 5889999999987665432 11 11 02368888888886543
No 83
>1y9q_A Transcriptional regulator, HTH_3 family; transcriptional regulaator, strucutral genomics, protein structure initiative, PSI; 1.90A {Vibrio cholerae} SCOP: a.35.1.8 b.82.1.15
Probab=53.66 E-value=86 Score=25.24 Aligned_cols=118 Identities=5% Similarity=-0.031 Sum_probs=56.2
Q ss_pred CCHHHHHHHHHHhhcCccccccccc---------cCcccceEeeecC--CCCceeEEEEeecCCCCCc--cccCCCCcee
Q psy4445 99 VNVDYVKFVMKSYKSNPMEWRKYSK---------FDKYKYTRNLVDA--GNDKFNLMILCWGEGHGSS--VHDHADAHCF 165 (279)
Q Consensus 99 vd~~~v~~ll~~y~sn~~dW~~ya~---------~d~~rYtRNLV~~--~ngk~nL~~LcW~pGq~S~--IHdH~~ahC~ 165 (279)
.+++.+.++.+.+..+++++..-.. .....|++.++.. .+..+.++.+...||..++ .|-|.....+
T Consensus 51 p~~~~l~~ia~~l~v~~~~l~~~~~~~~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~pg~~~~~~~H~h~~~E~~ 130 (192)
T 1y9q_A 51 PTIATLWKIASGLEASFSAFFANDPQLLSSERSFPDDLNMKIHTLFPYAADTGLEIFEITLLDHHQQMSSPHALGVIEYI 130 (192)
T ss_dssp CCHHHHHHHHHHHTCCSGGGGTTSTHHHHHCCBCTTCTTEEEEEEEEEETTTTEEEEEEEECTTCEEEECCCSTTCEEEE
T ss_pred CCHHHHHHHHHHHCcCHHHHcCCCCCCCccceEEeCCCCEEEEEeccCCCCCcEEEEEEEECCCCCccCCCCCCCCEEEE
Confidence 4566666666666655544432111 1123466666644 3578999999999998877 6666655555
Q ss_pred e--eeccc----ceeecccC-cccccccceeeeee-cCCCcceeEEEeecCCCccccccC
Q psy4445 166 M--TNETK----KSLYTSSL-NKVSCTLYTRNLVD-AGNDKFNLMILCWGEGHGSSVHDH 217 (279)
Q Consensus 166 ~--~g~~~----e~~y~~~~-nk~s~t~YTRnlV~-~i~~~~elvll~W~pGQ~SpIHDH 217 (279)
+ +|++. ...|...+ ..+....-..+.+. ..++.. +++++..|.+...-|-|
T Consensus 131 ~Vl~G~~~~~~~~~~~~l~~GD~i~i~~~~~H~~~n~~~~~~-~l~v~~~~~~~~~~~~~ 189 (192)
T 1y9q_A 131 HVLEGIMKVFFDEQWHELQQGEHIRFFSDQPHGYAAVTEKAV-FQNIVAYPRREGGSHHH 189 (192)
T ss_dssp EEEESCEEEEETTEEEEECTTCEEEEECSSSEEEEESSSCEE-EEEEEECCC--------
T ss_pred EEEEeEEEEEECCEEEEeCCCCEEEEcCCCCeEeECCCCCcE-EEEEEecCcccCCcccc
Confidence 5 35443 12222111 00100111122222 223455 66667666666555544
No 84
>2q30_A Uncharacterized protein; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: MSE; 1.94A {Desulfovibrio desulfuricans subsp}
Probab=53.58 E-value=17 Score=26.17 Aligned_cols=35 Identities=20% Similarity=0.472 Sum_probs=27.5
Q ss_pred cccceEeeecCCCCceeEEEEeecCCCCCccccCCC
Q psy4445 126 KYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHAD 161 (279)
Q Consensus 126 ~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ 161 (279)
+..+.|.++.. +..+.+..+...||...+.|.|..
T Consensus 19 ~~~~~~~~l~~-~~~~~~~~~~~~~g~~~~~H~H~~ 53 (110)
T 2q30_A 19 DQRFVMELVHE-SENFKIVSFTFKAGQELPVHSHNI 53 (110)
T ss_dssp SSSCEEEEEEE-CSSCEEEEEEECTTCEEEEECCSS
T ss_pred CCCEEEEEEec-CCCEEEEEEEECCCCcCCcccCCC
Confidence 34566766654 567888888899999999999985
No 85
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=53.49 E-value=19 Score=29.70 Aligned_cols=32 Identities=13% Similarity=0.059 Sum_probs=27.1
Q ss_pred cCCCccccc---c-CCCcceeeEeecceEEEEeecC
Q psy4445 207 GEGHGSSVH---D-HADAHCFMKMLDGCLTETRYAW 238 (279)
Q Consensus 207 ~pGQ~SpIH---D-H~gshC~~kVL~G~l~E~rY~~ 238 (279)
-|+..-+.| . |.|.|..+.||+|+|+-..|.-
T Consensus 22 lP~~ll~~H~~~~Tk~Gtwg~l~VL~G~L~f~~~~e 57 (127)
T 3bb6_A 22 APAGIFERHLDKGTRPGVYPRLSVMHGAVKYLGYAD 57 (127)
T ss_dssp SCGGGGSSBCCTTCCTTEEEEEEEEESEEEEEEESS
T ss_pred ChHHHHhhccccCCCCCEEEEEEEEEeEEEEEEECC
Confidence 466677889 6 9999999999999999877764
No 86
>1v70_A Probable antibiotics synthesis protein; structural genomics, thermus thermophilus HB8, riken structu genomics/proteomics initiative, RSGI; 1.30A {Thermus thermophilus} SCOP: b.82.1.9 PDB: 2dct_A
Probab=51.86 E-value=13 Score=26.18 Aligned_cols=36 Identities=17% Similarity=0.173 Sum_probs=26.0
Q ss_pred cccceEeeecCCCCceeEEEEeecCCCCCccccCCCC
Q psy4445 126 KYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADA 162 (279)
Q Consensus 126 ~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~a 162 (279)
+.+..+..+.. ++.+.+..+...||...+.|.|.+.
T Consensus 14 ~~~~~~~~~~~-~~~~~~~~~~~~pg~~~~~H~H~~~ 49 (105)
T 1v70_A 14 PEKMAKIPVFQ-SERMLYDLYALLPGQAQKVHVHEGS 49 (105)
T ss_dssp SSSCEEEEEEE-ETTEEEEEEEECTTCEEEEECCSSC
T ss_pred ccccccceecC-CCceEEEEEEECCCCcCCccCCCCC
Confidence 34444333332 5568889999999999999999874
No 87
>4e2g_A Cupin 2 conserved barrel domain protein; MCSG, PSI-biology, structural genomics, GEBA, midwest center structural genomics; HET: MSE; 1.86A {Sphaerobacter thermophilus}
Probab=51.75 E-value=51 Score=24.41 Aligned_cols=42 Identities=7% Similarity=0.132 Sum_probs=31.0
Q ss_pred cceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee--eeccc
Q psy4445 128 KYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM--TNETK 171 (279)
Q Consensus 128 rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~--~g~~~ 171 (279)
..+|.++. +..+.+..+...||...+.|.|....-++ +|++.
T Consensus 30 G~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~~ 73 (126)
T 4e2g_A 30 GFAMQAIQ--GKNLMLNWVRIEPNTEMPAHEHPHEQAGVMLEGTLE 73 (126)
T ss_dssp TEEEEEEE--CSSCEEEEEEECTTCEEEEECCSSEEEEEEEEECEE
T ss_pred CeEEEEEe--CCCeEEEEEEECCCCcCCCccCCCceEEEEEEeEEE
Confidence 45566664 45689999999999999999999765444 35543
No 88
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=51.09 E-value=20 Score=31.05 Aligned_cols=40 Identities=13% Similarity=0.200 Sum_probs=31.0
Q ss_pred CCcceeEEEeecCCCccccccC-CCcceeeEeecceEEEEe
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDH-ADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH-~gshC~~kVL~G~l~E~r 235 (279)
...++++++.-.||..++-|-| .+..=++.||+|+++-+.
T Consensus 56 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~ 96 (261)
T 1rc6_A 56 GASFVDYLVTLHQNGGNQQGFGGEGIETFLYVISGNITAKA 96 (261)
T ss_dssp TCSSEEEEEEEEEEEEESSCSCCTTEEEEEEEEESEEEEEE
T ss_pred CCcEEEEEEEEcCCCccCCCCCCCCceEEEEEEEeEEEEEE
Confidence 5678888899999998876654 354567889999988653
No 89
>4b29_A Dimethylsulfoniopropionate lyase; hydrolase, dimethylsulfide, sulphur cycle; 1.72A {Roseovarius nubinhibens ism}
Probab=50.70 E-value=24 Score=31.33 Aligned_cols=36 Identities=17% Similarity=0.391 Sum_probs=31.2
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
.+...+.++...||..-|.|.|.+ .=++-||+|.+.
T Consensus 129 s~~l~lG~v~l~PG~~yP~HsHp~-EEiy~VLsG~~e 164 (217)
T 4b29_A 129 TQSLRVTVGYWGPGLDYGWHEHLP-EELYSVVSGRAL 164 (217)
T ss_dssp CSSCEEEEEEECSSCEEEEEECSS-EEEEEEEEECEE
T ss_pred CCeEEEEEEEECCCCcCCCCCCCC-ceEEEEEeCCEE
Confidence 567788899999999999999997 578899999843
No 90
>3fjs_A Uncharacterized protein with RMLC-like cupin fold; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha JMP134}
Probab=50.68 E-value=37 Score=25.56 Aligned_cols=36 Identities=14% Similarity=0.228 Sum_probs=29.4
Q ss_pred ceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee
Q psy4445 129 YTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM 166 (279)
Q Consensus 129 YtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~ 166 (279)
=+|.|+. +.++.++.+...||+..+-|.|....-++
T Consensus 26 ~~~~l~~--~~~~~v~~~~l~~G~~~~~H~H~~~e~~~ 61 (114)
T 3fjs_A 26 PSAALFK--EHRLEVMRMVLPAGKQVGSHSVAGPSTIQ 61 (114)
T ss_dssp CCEEEEE--ETTEEEEEEEECTTCEEEEECCSSCEEEE
T ss_pred eeEEEEe--CCCEEEEEEEECCCCccCceeCCCcEEEE
Confidence 3477775 45789999999999999999999876555
No 91
>2ea7_A 7S globulin-1; beta barrel, cupin superfamily, plant protein; 1.80A {Vigna angularis} PDB: 2eaa_A* 2cv6_A 1uik_A
Probab=49.90 E-value=26 Score=33.60 Aligned_cols=72 Identities=14% Similarity=0.028 Sum_probs=48.9
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCC---CCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTD---EDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~---~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
..+..+.-.||...+.|-|+.++=|+.|++|+..-+........ .++++ .-...-...+++|+|-+|--.++
T Consensus 266 is~a~v~l~pG~m~~pH~hp~A~Ei~~V~~G~~~v~vv~~~g~~~~~~~~~~-~~~r~~~~~l~~Gdv~vvP~g~~ 340 (434)
T 2ea7_A 266 VFISSVDMKEGALLLPHYSSKAIVIMVINEGEAKIELVGLSDQQQQKQQEES-LEVQRYRAELSEDDVFVIPAAYP 340 (434)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESCEEEEEEEEEECCCCTTSCCC-EEEEEEEEEECTTCEEEECTTCC
T ss_pred cceEEEEEcCCeeeccEEcCCCCEEEEEEeeEEEEEEEecCccccccccccC-cceEEEEEEecCCcEEEECCCCe
Confidence 45556777999999999999999999999999888777542110 00001 10012344789999998865443
No 92
>2phl_A Phaseolin; plant SEED storage protein(vicilin); HET: NAG; 2.20A {Phaseolus vulgaris} SCOP: b.82.1.2 b.82.1.2 PDB: 1phs_A*
Probab=48.35 E-value=22 Score=33.86 Aligned_cols=71 Identities=13% Similarity=-0.018 Sum_probs=50.8
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCCC
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKNS 271 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~iG 271 (279)
-..++..+.-.||...+.|-|++++=|+.|++|+..-+....-... ++.+ .......+++|+|-+|--.+.
T Consensus 237 l~is~a~v~l~pG~~~~PH~h~~A~Ei~yVl~G~g~v~vv~~~~~~-~~~g---~~~~~~~l~~GDV~vvP~G~~ 307 (397)
T 2phl_A 237 LNVLISSIEMEEGALFVPHYYSKAIVILVVNEGEAHVELVGPKGNK-ETLE---YESYRAELSKDDVFVIPAAYP 307 (397)
T ss_dssp TTEEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEECC---CCSC---EEEEEEEEETTCEEEECTTCC
T ss_pred CCeeEEEEEEcCCcEeeeeEcCCCCEEEEEEeeeEEEEEEeccccc-cCCC---ceEEEEEecCCCEEEECCCCe
Confidence 5667777888999999999999999999999999888777641100 0001 122356788999988865543
No 93
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=48.22 E-value=18 Score=34.56 Aligned_cols=33 Identities=12% Similarity=0.174 Sum_probs=27.7
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceE
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCL 231 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l 231 (279)
.+.+.+..-.||+.++.|.|..+. ++.||+|+-
T Consensus 293 tl~~~~~~l~PG~~~~~HrH~~~~-v~~VleG~G 325 (394)
T 3bu7_A 293 TMGASMQMLRPGEHTKAHRHTGNV-IYNVAKGQG 325 (394)
T ss_dssp SCEEEEEEECTTCBCCCEEESSCE-EEEEEECCE
T ss_pred eeeEEEEEECCCCcCCCcccCCcE-EEEEEeCeE
Confidence 455567788999999999999876 888999975
No 94
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=46.04 E-value=62 Score=28.27 Aligned_cols=51 Identities=16% Similarity=0.091 Sum_probs=35.7
Q ss_pred EeecC-CCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 204 LCWGE-GHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 204 l~W~p-GQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
+...| |...+.|-|.+..-++.||+|+++-+. ++ ....+.+|++-||....
T Consensus 222 ~~~~p~g~~~~~h~H~~~~e~~~vl~G~~~~~i-----~~-----------~~~~l~~GD~~~ip~~~ 273 (337)
T 1y3t_A 222 SSEGPKGDRIVDHYHEYHTETFYCLEGQMTMWT-----DG-----------QEIQLNPGDFLHVPANT 273 (337)
T ss_dssp EEEECSCCCCCCEECSSCEEEEEEEESCEEEEE-----TT-----------EEEEECTTCEEEECTTC
T ss_pred EEEcCCCCCCCCcCCCCCcEEEEEEeCEEEEEE-----CC-----------EEEEECCCCEEEECCCC
Confidence 34445 788899999966788899999987543 11 13467788887776543
No 95
>1uij_A Beta subunit of beta conglycinin; double-stranded beta helix, SEED storage protein, sugar binding protein; 2.50A {Glycine max} SCOP: b.82.1.2 b.82.1.2 PDB: 1ipk_A 1ipj_A*
Probab=45.24 E-value=29 Score=32.97 Aligned_cols=72 Identities=15% Similarity=0.034 Sum_probs=47.4
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCC--CCC-CCCCcceeecceeecCCCeeEEcCCC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQT--DED-GEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~--~~~-g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..+..+.=.||...+.|-|+.++=|+.|++|+..-+....... +.. ++...-...-...+++|+|-+|--.+
T Consensus 249 is~a~~~l~~g~~~~pH~h~~A~Ei~~V~~G~~~v~~v~~~g~~~~~~~~~~~~~~~~~~~~l~~Gdv~vvP~g~ 323 (416)
T 1uij_A 249 IFLSSVDINEGALLLPHFNSKAIVILVINEGDANIELVGIKEQQQKQKQEEEPLEVQRYRAELSEDDVFVIPAAY 323 (416)
T ss_dssp EEEEEEEECTTEEEEEEEESSCEEEEEEEESEEEEEEEEEC------------CCEEEEEEEEETTCEEEECTTC
T ss_pred cceEEEEEcCCcEecceEcCCCcEEEEEEeeEEEEEEEcCCCccccccccccccceEEEEEEecCCcEEEECCCC
Confidence 4555667789999999999999999999999988877754221 000 00011001233478999999886544
No 96
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=44.31 E-value=23 Score=29.33 Aligned_cols=51 Identities=12% Similarity=0.184 Sum_probs=31.9
Q ss_pred CccccccccccCcccceEeeecC-CCCceeEEEEeecCCCCCccccCCCCcee
Q psy4445 114 NPMEWRKYSKFDKYKYTRNLVDA-GNDKFNLMILCWGEGHGSSVHDHADAHCF 165 (279)
Q Consensus 114 n~~dW~~ya~~d~~rYtRNLV~~-~ngk~nL~~LcW~pGq~S~IHdH~~ahC~ 165 (279)
+...|.++....+ .-.|-.+.. ..+.....++-|.||...|.|.|.+..=.
T Consensus 15 ~~~~W~~~~~~~~-Gv~~~~L~~d~~~g~~v~lvr~~pG~~~p~H~H~g~ee~ 66 (159)
T 3ebr_A 15 NDTPWMPFAPYSN-DVMVKYFKIDPVRGETITLLKAPAGMEMPRHHHTGTVIV 66 (159)
T ss_dssp GGSCCEECTTTCS-SSEEEEEEEETTTTEEEEEEEECSSCBCCCEEESSCEEE
T ss_pred CcCCcEeCCCCCC-CEEEEEeeEcCCCCeEEEEEEECCCCCcccccCCCCEEE
Confidence 4567988664333 333444432 22335566677999999999999774433
No 97
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=43.24 E-value=30 Score=30.25 Aligned_cols=40 Identities=13% Similarity=0.141 Sum_probs=30.9
Q ss_pred CCcceeEEEeecCCCccccccC-CCcceeeEeecceEEEEe
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDH-ADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH-~gshC~~kVL~G~l~E~r 235 (279)
...++++++.-.||..+.-|-| .+..=++.||+|+++-+.
T Consensus 59 ~~~~~~~~~~l~pg~~~~~~~~~~~~ee~~~Vl~G~l~~~~ 99 (274)
T 1sef_A 59 GATFVDYIATFHKNGQQTTGFGGDGIQTLVYVIDGRLRVSD 99 (274)
T ss_dssp TCSSEEEEEEEEEEEEECSCSSBTTEEEEEEEEESEEEEEC
T ss_pred CCcEEEEEEEECCCCcCCCCCCCCCceEEEEEEEeEEEEEE
Confidence 5778999999999988776544 455667889999988643
No 98
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=40.64 E-value=63 Score=26.71 Aligned_cols=66 Identities=14% Similarity=0.160 Sum_probs=44.3
Q ss_pred ccceeeeeecC-CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCe
Q psy4445 185 TLYTRNLVDAG-NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEV 263 (279)
Q Consensus 185 t~YTRnlV~~i-~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geV 263 (279)
..|.+.++... ++.+++.++.|. .++.|-|....=+..||+|+++-+. .+ ....+.+|++
T Consensus 51 ~v~i~~l~s~~~~~~~s~g~~~~e---~~~~~~~~~~eE~~yVLeG~~~l~i----~g------------~~~~l~~GD~ 111 (151)
T 4axo_A 51 VVYTKDLFTLEESPRLGCGMMEMK---ETTFDWTLNYDEIDYVIDGTLDIII----DG------------RKVSASSGEL 111 (151)
T ss_dssp CEEEEECSCTTTCSSCEEEEEEEE---EEEEEEECSSEEEEEEEEEEEEEEE----TT------------EEEEEETTCE
T ss_pred CEEEEEeecCCCCCcEEEEEEEEc---CccccEeCCCcEEEEEEEeEEEEEE----CC------------EEEEEcCCCE
Confidence 56777777654 458888898896 4445555555567789999988763 11 1345777777
Q ss_pred eEEcCC
Q psy4445 264 CYINGK 269 (279)
Q Consensus 264 tYIsD~ 269 (279)
-||...
T Consensus 112 i~iP~G 117 (151)
T 4axo_A 112 IFIPKG 117 (151)
T ss_dssp EEECTT
T ss_pred EEECCC
Confidence 777643
No 99
>2fqp_A Hypothetical protein BP2299; double-stranded beta-helix fold, structural genomics, joint for structural genomics, JCSG; HET: 1PE; 1.80A {Bordetella pertussis tohama I}
Probab=39.76 E-value=26 Score=25.34 Aligned_cols=26 Identities=15% Similarity=0.235 Sum_probs=22.9
Q ss_pred CCceeEEEEeecCCCCCccccCCCCc
Q psy4445 138 NDKFNLMILCWGEGHGSSVHDHADAH 163 (279)
Q Consensus 138 ngk~nL~~LcW~pGq~S~IHdH~~ah 163 (279)
+.++.++.+...||..++.|-|.+..
T Consensus 15 ~~~~~~~~~~~~Pg~~~~~H~H~~~~ 40 (97)
T 2fqp_A 15 NERVKVTEWRFPPGGETGWHRHSMDY 40 (97)
T ss_dssp SSSEEEEEEEECTTCBCCSEECCSCE
T ss_pred CCeEEEEEEEECCCCCCCCEECCCCc
Confidence 66788999999999999999999864
No 100
>3nr5_A MAF1, repressor of RNA polymerase III transcription MAF; RNA-POL III transcriptional repressor, RNA-POL III; 1.55A {Homo sapiens}
Probab=38.57 E-value=18 Score=30.91 Aligned_cols=33 Identities=30% Similarity=0.515 Sum_probs=27.9
Q ss_pred hhcccceeeccCCcceeeeeeeccCCCCCCCCcccccccCCCcCCCCCcCcHHHHHHHHHHHh
Q psy4445 32 FCGDIERYSCSNDKTLVSKCTAYDTNNNTDGDLDSYYKFPRSIDNLPQLNCLADLVEELHRIF 94 (279)
Q Consensus 32 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~lV~~L~~~~ 94 (279)
.-|.||-|||- ||.+...-++|--||..|...|
T Consensus 31 i~g~iEayScK------------------------------pL~~~~SRKTl~yLIaTLNasf 63 (164)
T 3nr5_A 31 IIGRIESYSCK------------------------------PLSDKCSRKTLFYLIATLNESF 63 (164)
T ss_dssp BCEEEEEEEEC------------------------------CCCTTCSCHHHHHHHHHHHHHH
T ss_pred EEEEEeeeccc------------------------------ccccchhhhhHHHHHHHHHhhc
Confidence 45889999996 6666666789999999999998
No 101
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=37.81 E-value=57 Score=29.46 Aligned_cols=57 Identities=18% Similarity=0.226 Sum_probs=40.1
Q ss_pred CCcceeEEEeecCCCcccc-ccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSSV-HDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpI-HDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
...+.+.++...||...|. |-|.-.|. +.||+|+..- .... ....+++|++.||.+.
T Consensus 183 ~~d~~~~~~t~~PG~~~p~~e~H~~eh~-~~vL~G~g~y---~l~~-------------~~~~V~~GD~i~~~~~ 240 (266)
T 4e2q_A 183 AYDFNIHTMDFQPGEFLNVKEVHYNQHG-LLLLEGQGIY---RLGD-------------NWYPVQAGDVIWMAPF 240 (266)
T ss_dssp TCSEEEEEEEECTTCBCSSCCCCSCCEE-EEEEECEEEE---EETT-------------EEEEEETTCEEEECTT
T ss_pred ccceEEEEEEECCCcCcCCceEcccceE-EEEEeceEEE---EECC-------------EEEEecCCCEEEECCC
Confidence 4566677999999999996 66665565 5699997543 3221 1345788899888765
No 102
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=37.68 E-value=69 Score=29.45 Aligned_cols=53 Identities=9% Similarity=0.175 Sum_probs=39.0
Q ss_pred ceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcC
Q psy4445 199 FNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYING 268 (279)
Q Consensus 199 ~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD 268 (279)
....+..-.||+.++.|.|..+ -+..|++|+..-+. ++ .+..+.+|+|-||-.
T Consensus 268 i~~~~~~l~pG~~~~~H~h~~~-ev~~v~~G~g~~~v-----~~-----------~~~~~~~GD~~~vP~ 320 (354)
T 2d40_A 268 MGAFLQLLPKGFASRVARTTDS-TIYHVVEGSGQVII-----GN-----------ETFSFSAKDIFVVPT 320 (354)
T ss_dssp CEEEEEEECTTCBCCCBEESSC-EEEEEEEEEEEEEE-----TT-----------EEEEEETTCEEEECT
T ss_pred ceeEEEEECCCCCCCceecCCc-EEEEEEeCeEEEEE-----CC-----------EEEEEcCCCEEEECC
Confidence 3445667799999999999997 79999999866554 11 234677777777655
No 103
>1dgw_X Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_X
Probab=37.12 E-value=29 Score=25.73 Aligned_cols=37 Identities=19% Similarity=0.084 Sum_probs=31.2
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecceEEEE
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTET 234 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~ 234 (279)
..++..+.-.||..-+-|-|+.++=++-|++|++.-.
T Consensus 35 gls~~r~~l~~gg~~~PH~hprA~ei~~V~~G~~~v~ 71 (79)
T 1dgw_X 35 DILLNCLQMNEGALFVPHYNSRATVILVANEGRAEVE 71 (79)
T ss_dssp TEEEEEEEECTTCEEEEEEESSCEEEEEEEESCEEEE
T ss_pred CcceEEEEEcCCcCcCCccCCCCcEEEEEEeceEEEE
Confidence 3456667788999999999999999999999976653
No 104
>1yhf_A Hypothetical protein SPY1581; structural genomics, conserved hypothetical protein, PSI, PR structure initiative; 2.00A {Streptococcus pyogenes} SCOP: b.82.1.9
Probab=36.66 E-value=22 Score=25.97 Aligned_cols=49 Identities=10% Similarity=0.183 Sum_probs=32.0
Q ss_pred CccccccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee
Q psy4445 114 NPMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM 166 (279)
Q Consensus 114 n~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~ 166 (279)
+..++.+|.. +....|.|+. +..+.+..+...||+..+.|.|....-++
T Consensus 17 ~~~~~~~~~~--~~~~~~~l~~--~~~~~~~~~~~~~g~~~~~H~H~~~e~~~ 65 (115)
T 1yhf_A 17 DLTQEVMIEQ--DQMLSRTLVQ--RQDLGITVFSLDKGQEIGRHSSPGDAMVT 65 (115)
T ss_dssp CHHHHSCCCT--TCEEEEEEEE--ETTEEEEEEEECTTCEEEEECCSSEEEEE
T ss_pred ehhheeeecC--CCeEEEEEEe--CCceEEEEEEECCCCccCCEECCCcEEEE
Confidence 3445555543 1223355553 45688888889999999999998754443
No 105
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=36.53 E-value=46 Score=30.65 Aligned_cols=35 Identities=11% Similarity=0.101 Sum_probs=29.3
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEE
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLT 232 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~ 232 (279)
..+.+....-.||..++.|.|.. .=+..|++|+.+
T Consensus 98 ~~l~~~~~~l~PG~~~~~H~H~~-~e~~yVl~G~g~ 132 (354)
T 2d40_A 98 ATLYAGLQLIMPGEVAPSHRHNQ-SALRFIVEGKGA 132 (354)
T ss_dssp SSCEEEEEEECTTCEEEEEEESS-CEEEEEEECSSC
T ss_pred CcEEEEEEEECCCCCcCCeecCc-ceEEEEEEEEEE
Confidence 45678888899999999999986 478889999753
No 106
>1juh_A Quercetin 2,3-dioxygenase; cupin, glycoprotein, beta sandwich, oxidoreduct; HET: NAG BMA MAN; 1.60A {Aspergillus japonicus} SCOP: b.82.1.5 PDB: 1gqh_A* 1h1i_A* 1h1m_A* 1gqg_A*
Probab=36.35 E-value=69 Score=29.25 Aligned_cols=62 Identities=11% Similarity=-0.032 Sum_probs=40.3
Q ss_pred CCcceeEEEeecCCCccc---cccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGEGHGSS---VHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~Sp---IHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+.++++ ..-.|+..++ .|-|....=++.||+|+++-..=.. ++ . .....+.+|++-||...
T Consensus 45 ~~~~~~~-~~~~p~g~~~~~~~H~H~~~~E~~~Vl~G~~~~~v~~~--~g------~---~~~~~L~~GD~v~ip~g 109 (350)
T 1juh_A 45 GYAFTLM-GTNAPHSDALGVLPHIHQKHYENFYCNKGSFQLWAQSG--NE------T---QQTRVLSSGDYGSVPRN 109 (350)
T ss_dssp TTSCEEE-EEEECCCSSCSSCCEECSSCEEEEEEEESEEEEEEEET--TS------C---CEEEEEETTCEEEECTT
T ss_pred CCcEEEE-EEEcCCCCCCCCccccCCCceEEEEEEEEEEEEEECCc--CC------c---eEEEEECCCCEEEECCC
Confidence 5678887 5556766655 8999966777889999987643221 10 0 12346778888877643
No 107
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=36.17 E-value=50 Score=25.92 Aligned_cols=62 Identities=8% Similarity=0.070 Sum_probs=41.5
Q ss_pred eeecCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 191 LVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 191 lV~~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.....++.+++.+....||..+ +|-|.+ .=++.||+|+++-+. +++ . ...+.+|++-+|...
T Consensus 41 ~~~~~~g~~~~g~w~~~pG~~~-~~~~~~-~E~~~Vl~G~~~l~~----~~g-----~------~~~l~~GD~~~ip~g 102 (123)
T 3bcw_A 41 AFEGGQGKVESGVWESTSGSFQ-SNTTGY-IEYCHIIEGEARLVD----PDG-----T------VHAVKAGDAFIMPEG 102 (123)
T ss_dssp EEEETTTTEEEEEEEEEEEEEE-CCCTTE-EEEEEEEEEEEEEEC----TTC-----C------EEEEETTCEEEECTT
T ss_pred EEeCCCCCEEEEEEEECCCcee-eEcCCC-cEEEEEEEEEEEEEE----CCC-----e------EEEECCCCEEEECCC
Confidence 3334467788888888999876 577763 456679999987643 121 1 246788888887543
No 108
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=34.88 E-value=45 Score=31.77 Aligned_cols=35 Identities=17% Similarity=0.163 Sum_probs=29.2
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceE
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCL 231 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l 231 (279)
...+.+....-.||+..+.|.|..+. +..||+|+-
T Consensus 120 t~~L~a~~~~l~PG~~~~~HrH~~~e-v~~IleG~G 154 (394)
T 3bu7_A 120 CGWLFSGIQTMKAGERAGAHRHAASA-LRFIMEGSG 154 (394)
T ss_dssp BTTBEEEEEEECTTCBCCCEEESSCE-EEEEEECSC
T ss_pred CCeeEEEEEEECCCCCcCCccCCcce-EEEEEEeeE
Confidence 45566677788999999999999985 889999963
No 109
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=34.04 E-value=72 Score=28.20 Aligned_cols=45 Identities=18% Similarity=0.149 Sum_probs=32.4
Q ss_pred eeeeee-cCCCcceeEEEeecCCCcccc-ccCCCcceeeEeecceEEE
Q psy4445 188 TRNLVD-AGNDKFNLMILCWGEGHGSSV-HDHADAHCFMKMLDGCLTE 233 (279)
Q Consensus 188 TRnlV~-~i~~~~elvll~W~pGQ~SpI-HDH~gshC~~kVL~G~l~E 233 (279)
+|.++- .....+++..+.-.||...+. |-|.-.| .+.||+|++.-
T Consensus 179 ~r~l~p~~~~~~~~~~~~~l~pG~~i~~~~~h~~e~-~~~il~G~~~~ 225 (278)
T 1sq4_A 179 TRFVDMSDMRHDMHVNIVNFEPGGVIPFAETHVMEH-GLYVLEGKAVY 225 (278)
T ss_dssp ECSSCTTCTTCSEEEEEEEECSSSEESCCCCCSEEE-EEEEEECEEEE
T ss_pred EEEecCCCcCCCeEEEEEEECCCCCcCCCCCCCccE-EEEEEeCEEEE
Confidence 344443 335689999999999999997 4555445 57899998764
No 110
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=32.55 E-value=1.2e+02 Score=25.95 Aligned_cols=56 Identities=13% Similarity=0.132 Sum_probs=40.4
Q ss_pred CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCCC
Q psy4445 196 NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGKN 270 (279)
Q Consensus 196 ~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~i 270 (279)
..++++.++.-.||..++-|- ..=++.||+|+++-+. .+ ....|.+|+..|+....
T Consensus 47 ~~~~~~~~~~l~Pg~~~~~~~---~ee~~~Vl~G~~~~~~----~~------------~~~~l~~Gd~~~~p~~~ 102 (246)
T 1sfn_A 47 GARFVQFTAEMPAGAQATESV---YQRFAFVLSGEVDVAV----GG------------ETRTLREYDYVYLPAGE 102 (246)
T ss_dssp CCSSEEEEEEECTTCEEECCS---SEEEEEEEEEEEEEEC----SS------------CEEEECTTEEEEECTTC
T ss_pred CCcEEEEEEEECCCCcCCCCc---eeEEEEEEECEEEEEE----CC------------EEEEECCCCEEEECCCC
Confidence 568899999999999888773 4567789999987643 11 13467777777776543
No 111
>2q1z_B Anti-sigma factor CHRR, transcriptional activator; ECF sigma factor, cupin fold, zinc bindin transcription factor; 2.40A {Rhodobacter sphaeroides} PDB: 2z2s_B
Probab=32.40 E-value=1.3e+02 Score=25.15 Aligned_cols=53 Identities=15% Similarity=0.293 Sum_probs=34.4
Q ss_pred HHHHhhcC---ccccccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCCce
Q psy4445 107 VMKSYKSN---PMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHC 164 (279)
Q Consensus 107 ll~~y~sn---~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC 164 (279)
.|++|... ...|++.. + .-.|-.++.+ +...+.++-|.||..-|.|.|.+..=
T Consensus 93 ~l~~~~~~~~~~~~W~~~~---~-Gv~~~~L~~~-~~~~v~l~~~~pG~~~p~H~H~g~E~ 148 (195)
T 2q1z_B 93 PLADYVGRRLEDVRWRTLG---G-GVRQAILPTG-GEAIARLLWIPGGQAVPDHGHRGLEL 148 (195)
T ss_dssp THHHHHCSCTTCSCCEECS---S-SCEEEEECCS-SSSEEEEEEECTTCBCCCCCCSSCEE
T ss_pred hHHHhhcCCccccCceecC---C-CeEEEEEecC-CCcEEEEEEECCCCCCCCcCCCCeEE
Confidence 44555532 35686652 2 3356666543 34566777899999999999998655
No 112
>3d0j_A Uncharacterized protein CA_C3497; beta-barrel, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.53A {Clostridium acetobutylicum atcc 824}
Probab=28.66 E-value=1.2e+02 Score=25.23 Aligned_cols=51 Identities=12% Similarity=0.007 Sum_probs=38.1
Q ss_pred cccccceeeeeecCCCcceeEEEeecCC----CccccccCCCcceeeEeecceEEEEe
Q psy4445 182 VSCTLYTRNLVDAGNDKFNLMILCWGEG----HGSSVHDHADAHCFMKMLDGCLTETR 235 (279)
Q Consensus 182 ~s~t~YTRnlV~~i~~~~elvll~W~pG----Q~SpIHDH~gshC~~kVL~G~l~E~r 235 (279)
+...+|.+-.. +++-.|-++-|.|. +....|.|...-=++-||+|+++...
T Consensus 11 ~~~eGy~~~~~---~~~W~Va~~n~~~~~~~~~i~~~h~H~~tDE~Fivl~G~l~i~~ 65 (140)
T 3d0j_A 11 NNREGILCVYK---NEKWLVCIKNWKPDNDIEGIAHLEIHHSTDEQFILSAGKAILIT 65 (140)
T ss_dssp CCSSSEEEEEE---CSSEEEEEEECCGGGBTTTCCEEEEESSCCEEEEEEESCEEEEE
T ss_pred ccCCceeEEEE---cCCEEEEEEeccCcCCcccCHhhccCCCCCeEEEEEecEEEEEE
Confidence 33445555433 56677777888876 78899999999999999999987643
No 113
>3ht1_A REMF protein; cupin fold, Zn-binding, antibiotic biosynthesis, resistomycin, metalloprotein, cyclase, lyase; 1.20A {Streptomyces resistomycificus} PDB: 3ht2_A
Probab=27.28 E-value=53 Score=24.76 Aligned_cols=50 Identities=20% Similarity=0.186 Sum_probs=32.7
Q ss_pred ccccccccCccc-ceEeeecC--CCCceeEEEEeecCCCCCccccCCCCceee
Q psy4445 117 EWRKYSKFDKYK-YTRNLVDA--GNDKFNLMILCWGEGHGSSVHDHADAHCFM 166 (279)
Q Consensus 117 dW~~ya~~d~~r-YtRNLV~~--~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~ 166 (279)
+|.++....... ..|-|+.. +++.+.+..+.-.||...+.|.|....-.+
T Consensus 12 ~~~~~~~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~pg~~~~~H~H~~~e~~~ 64 (145)
T 3ht1_A 12 KAEIVREPGAKETTHRKLIDTPDGADRFVLTEFEVSPNGSTPPHFHEWEHEIY 64 (145)
T ss_dssp CCEECCSTTCEEEEEEEEECGGGTCCSEEEEEEEEEEEEECCCEECSSCEEEE
T ss_pred CHhHcCCCCCCCcEEEEEEccCCCCCcEEEEEEEECCCCcCCCccCCCceEEE
Confidence 344443223233 33555544 345788888888899999999999876654
No 114
>3s7i_A Allergen ARA H 1, clone P41B; bicupin, vicilin, storage SEED protein; 2.35A {Arachis hypogaea} PDB: 3s7e_A 3smh_A
Probab=26.25 E-value=56 Score=31.26 Aligned_cols=40 Identities=18% Similarity=0.086 Sum_probs=33.9
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeec
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYA 237 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~ 237 (279)
..|.|..+.=.||...+-| |.++..++.|++|+.+-..-.
T Consensus 42 ~~~~l~~~~l~p~gl~~Ph-h~~A~ei~yV~~G~g~~g~V~ 81 (418)
T 3s7i_A 42 QNHRIVQIEAKPNTLVLPK-HADADNILVIQQGQATVTVAN 81 (418)
T ss_dssp TTCEEEEEEECTTEEEEEE-EESEEEEEEEEESEEEEEEEC
T ss_pred cceEEEEEEecCCceeeee-eCCCCeEEEEEEeeEEEEEEe
Confidence 4677777788899999999 999999999999988765544
No 115
>3kmh_A D-lyxose isomerase; cupin beta-barrel, structural genomics, montreal-kingston BA structural genomics initiative, BSGI; 1.58A {Escherichia coli O157} PDB: 3mpb_A*
Probab=26.19 E-value=1.1e+02 Score=27.76 Aligned_cols=44 Identities=11% Similarity=0.009 Sum_probs=29.0
Q ss_pred cceeEEEeecCCCccccccCCCcceeeEeecc-eEEEEeecCCCC
Q psy4445 198 KFNLMILCWGEGHGSSVHDHADAHCFMKMLDG-CLTETRYAWPQT 241 (279)
Q Consensus 198 ~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G-~l~E~rY~~p~~ 241 (279)
.|.-=+|.=.|||.+|.|-|..--==+...-| .|....|...++
T Consensus 105 ~YaeK~Li~~~gQ~~P~H~H~~K~EdiinRgGG~L~v~Ly~~~~~ 149 (246)
T 3kmh_A 105 CYAEKIMHVRDAQVTPMHFHWRKREDIINRGGGNLIVELWNADSN 149 (246)
T ss_dssp CEEEEEEEECBTCEEEEEEESSCCEEEEEEEESCEEEEEEEBCTT
T ss_pred cceeeEeeccCCCCCCcccCCCccccEEecCCCeEEEEEEecCCC
Confidence 34444555589999999999872222222333 788888988655
No 116
>2pfw_A Cupin 2, conserved barrel domain protein; cupin domain, struc genomics, joint center for structural genomics, JCSG; 1.90A {Shewanella frigidimarina}
Probab=26.17 E-value=41 Score=24.52 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=30.2
Q ss_pred cceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee--eecc
Q psy4445 128 KYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM--TNET 170 (279)
Q Consensus 128 rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~--~g~~ 170 (279)
.+++.++..+ +++.++.+...||...+.|.|....-++ +|++
T Consensus 22 g~~~~~l~~~-~~~~~~~~~~~pg~~~~~H~H~~~e~~~vl~G~~ 65 (116)
T 2pfw_A 22 GLKRQMLGFN-HELMAVKIWFDKGAEGYVHAHRHSQVSYVVEGEF 65 (116)
T ss_dssp TEEEEEEEEE-TTEEEEEEEECTTEEEEEECCSSEEEEEEEEECE
T ss_pred CeEEEEEecC-CceEEEEEEECCCCcCCcEECCcceEEEEEeeEE
Confidence 4666666543 4588888888999999999998754443 3544
No 117
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=25.63 E-value=68 Score=30.36 Aligned_cols=34 Identities=18% Similarity=0.217 Sum_probs=27.5
Q ss_pred CcceeEEEeecCCCccccccCCCcceeeEeecceE
Q psy4445 197 DKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCL 231 (279)
Q Consensus 197 ~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l 231 (279)
+.+.+.+..-.||+.++-|.|..+ -+..||+|+-
T Consensus 101 ~~L~a~~~~l~PG~~~~~HrH~~~-ev~~VleG~G 134 (368)
T 3nw4_A 101 PTMWAAIQYLGPRETAPEHRHSQN-AFRFVVEGEG 134 (368)
T ss_dssp SSCEEEEEEECTTCEEEEEEESSC-EEEECSSCEE
T ss_pred CceEEEEEEECCCCccCceecccc-eEEEEEecce
Confidence 445555667899999999999975 6888999974
No 118
>3lag_A Uncharacterized protein RPA4178; functionally unknown protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris}
Probab=24.52 E-value=80 Score=23.40 Aligned_cols=30 Identities=20% Similarity=0.254 Sum_probs=24.8
Q ss_pred EeeecCCCCceeEEEEeecCCCCCccccCCCC
Q psy4445 131 RNLVDAGNDKFNLMILCWGEGHGSSVHDHADA 162 (279)
Q Consensus 131 RNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~a 162 (279)
.=|++ |+++-+.-+...||+..+.|.|...
T Consensus 9 ~V~ie--n~~~rV~r~~i~PG~~~~~H~H~~~ 38 (98)
T 3lag_A 9 EIQID--NDEVRVTEWRLPPGSATGHHTHGMD 38 (98)
T ss_dssp EEEEE--SSSEEEEEEEECTTEECCSEECCSC
T ss_pred eEEEc--CCeEEEEEEEECCCCccCcEECCCc
Confidence 34554 6789998899999999999999874
No 119
>3bal_A Acetylacetone-cleaving enzyme; jelly roll, tetramer, dioxygenase, iron, metal-binding, oxidoreductase; 1.95A {Acinetobacter johnsonii}
Probab=24.50 E-value=47 Score=27.74 Aligned_cols=50 Identities=16% Similarity=0.017 Sum_probs=36.1
Q ss_pred cceeeeee-cCCCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEee
Q psy4445 186 LYTRNLVD-AGNDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRY 236 (279)
Q Consensus 186 ~YTRnlV~-~i~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY 236 (279)
+-.|-.+. ......-.+++-+.||..-|-|.|.+ -=.+-||+|.+.-.-.
T Consensus 32 Gv~~k~L~~~~e~g~~t~lvr~~pG~~~p~H~H~g-~ee~~VL~G~~~~~~G 82 (153)
T 3bal_A 32 GITWQLLHSSPETSSWTAIFNCPAGSSFASHIHAG-PGEYFLTKGKMEVRGG 82 (153)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECTTEEECCEEESS-CEEEEEEESEEEETTC
T ss_pred CeEEEEEEECCccceEEEEEEeCCCCCccCccCCC-CEEEEEEEEEEEecCc
Confidence 33444443 22455566778999999999999999 6678899999875443
No 120
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=24.13 E-value=1.6e+02 Score=23.98 Aligned_cols=81 Identities=14% Similarity=0.190 Sum_probs=53.1
Q ss_pred eecccceeeccc--CcccccccceeeeeecC------CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecC
Q psy4445 167 TNETKKSLYTSS--LNKVSCTLYTRNLVDAG------NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAW 238 (279)
Q Consensus 167 ~g~~~e~~y~~~--~nk~s~t~YTRnlV~~i------~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~ 238 (279)
.+..++..|..+ .++++...|.-++|..+ ...-++|.+-|..|+. ......|.-+...|..
T Consensus 28 ~~~~~~~~y~V~F~DgS~s~dl~PedIvs~dc~~~GpP~~G~~V~V~W~DG~~-----------y~a~f~g~~~~~~YtV 96 (123)
T 2xdp_A 28 MAVTSQTFYEVMFDDGSFSRDTFPEDIVSRDCLKLGPPAEGEVVQVKWPDGKL-----------YGAKYFGSNIAHMYQV 96 (123)
T ss_dssp EEEEEEEEEEEEETTSCEEEEECGGGBCSSCHHHHCCCCTTCEEEEECTTSCE-----------EEEEEEEEEEEEEEEE
T ss_pred EEEeeEEEEEEEcCCCCccCCCCHhHcccccccccCCCCCCCEEEEEcCCCCE-----------EeEEEeeeeeEEEEEE
Confidence 344456666655 67777776666666543 3456899999999996 2357788888888887
Q ss_pred CCCCCCCCCCcceeecceeecCCC
Q psy4445 239 PQTDEDGEEKPLQVIGKSPLKLNE 262 (279)
Q Consensus 239 p~~~~~g~~~pL~~~~~~~l~~ge 262 (279)
-=.+ ++.+++.+..++..+|
T Consensus 97 ~FeD----gs~~~~kR~~iyt~~E 116 (123)
T 2xdp_A 97 EFED----GSQIAMKREDIYTLDE 116 (123)
T ss_dssp ECTT----SCEEEEEGGGCCCSSS
T ss_pred EECC----CCeEEecHHHcccccc
Confidence 5322 3456666665555544
No 121
>3cjx_A Protein of unknown function with A cupin-like FOL; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.60A {Ralstonia eutropha}
Probab=24.03 E-value=81 Score=26.19 Aligned_cols=58 Identities=10% Similarity=-0.043 Sum_probs=33.5
Q ss_pred CccccccccccCcccceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee--eeccc
Q psy4445 114 NPMEWRKYSKFDKYKYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM--TNETK 171 (279)
Q Consensus 114 n~~dW~~ya~~d~~rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~--~g~~~ 171 (279)
+...|++.....+.-..+-|.........+.++-|.||...|.|.|.+..=.+ +|.+.
T Consensus 16 ~~~~W~~~~~~~~GV~~~~L~~~~~~g~~v~lvr~~pG~~~p~H~H~g~ee~~VL~G~f~ 75 (165)
T 3cjx_A 16 TAHPFLKALGGHEGTDIFPLFMDPYNGLMVMRASFAPGLTLPLHFHTGTVHMYTISGCWY 75 (165)
T ss_dssp TSSCCBCSGGGCTTEEEEEEEEETTTTEEEEEEEECTTCBCCEEEESSCEEEEEEESEEE
T ss_pred ccCCcEECCCCCCCEEEEEeEeCCCCCcEEEEEEECCCCcCCcccCCCCEEEEEEEEEEE
Confidence 33568776532232233445332222244667779999999999997644333 35443
No 122
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=23.75 E-value=1e+02 Score=24.93 Aligned_cols=44 Identities=11% Similarity=0.096 Sum_probs=28.2
Q ss_pred CCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 218 ADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 218 ~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.|.|+.+.||+|+|+=.-|.-.... ++.....+.+|+...|.+.
T Consensus 36 ~GtWgkL~Vl~G~Lkf~~~~e~~~~--------~~~~~~~~~~~~~~~i~Pq 79 (119)
T 3dl3_A 36 VDVFGQICVMEGVVTYYGFANSEAT--------EPEIKVVINAGQFATSPPQ 79 (119)
T ss_dssp TTEEEEEEEEESEEEEEEESSTTCC--------SCSEEEEEETTEEEEECTT
T ss_pred CcEEEEEEEEEeEEEEEEEcCCCCC--------cccEEEEeCCCCCceeCCC
Confidence 4679999999999987666633220 1123345667777766654
No 123
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=21.89 E-value=1.6e+02 Score=23.73 Aligned_cols=80 Identities=18% Similarity=0.241 Sum_probs=52.0
Q ss_pred ecccceeeccc--CcccccccceeeeeecC------CCcceeEEEeecCCCccccccCCCcceeeEeecceEEEEeecCC
Q psy4445 168 NETKKSLYTSS--LNKVSCTLYTRNLVDAG------NDKFNLMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYAWP 239 (279)
Q Consensus 168 g~~~e~~y~~~--~nk~s~t~YTRnlV~~i------~~~~elvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~~p 239 (279)
+.-++..|..+ .++++...|.-++|..+ ...-++|.+-|..|+. ......|.-+...|...
T Consensus 28 ~~~~~~~y~V~F~DgS~s~dl~peDIvs~dc~~~GpP~~G~~V~V~W~DG~~-----------y~a~f~g~~~~~~Y~V~ 96 (118)
T 2qqr_A 28 RLTTETFYEVNFDDGSFSDNLYPEDIVSQDCLQFGPPAEGEVVQVRWTDGQV-----------YGAKFVASHPIQMYQVE 96 (118)
T ss_dssp EEEEEEEEEEEETTSCEEEEECGGGBCSSCHHHHCCCCTTCEEEEECTTSCE-----------EEEEEEEEEEEEEEEEE
T ss_pred EEeeEEEEEEEcCCCCccCCCCHhhcccccccccCCCCCCCEEEEEcCCCCE-----------eeeEEeceeEEEEEEEE
Confidence 44455666554 67777777777776543 3456899999999976 34456788888888875
Q ss_pred CCCCCCCCCcceeecceeecCCC
Q psy4445 240 QTDEDGEEKPLQVIGKSPLKLNE 262 (279)
Q Consensus 240 ~~~~~g~~~pL~~~~~~~l~~ge 262 (279)
=.+ ++.+++.+..++..+|
T Consensus 97 feD----gs~~~~kR~~iyt~~E 115 (118)
T 2qqr_A 97 FED----GSQLVVKRDDVYTLDE 115 (118)
T ss_dssp ETT----SCEEEECGGGEEETTS
T ss_pred ECC----CCEEEEcHHHeecccc
Confidence 221 3456666665555543
No 124
>2b8m_A Hypothetical protein MJ0764; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.70A {Methanocaldococcus jannaschii} SCOP: b.82.1.18
Probab=20.83 E-value=1.4e+02 Score=21.68 Aligned_cols=37 Identities=14% Similarity=0.203 Sum_probs=26.9
Q ss_pred cceEeeecCCCCceeEEEEeecCCCCCccccCCCCceee
Q psy4445 128 KYTRNLVDAGNDKFNLMILCWGEGHGSSVHDHADAHCFM 166 (279)
Q Consensus 128 rYtRNLV~~~ngk~nL~~LcW~pGq~S~IHdH~~ahC~~ 166 (279)
...|.++. +..+.+..+...||...+.|.|....-.+
T Consensus 16 ~~~~~~~~--~~~~~~~~~~~~pg~~~~~H~H~~~e~~~ 52 (117)
T 2b8m_A 16 KVVEKLVN--TEHVQINHIVLPRGEQMPKHYSNSYVHLI 52 (117)
T ss_dssp CEEEEEEE--CSSCEEEEEEEETTCBCCCEECSSCEEEE
T ss_pred ceeeeecC--CCceEEEEEEECCCCcCCCEeCCCcEEEE
Confidence 34566664 45688888888999999999998755443
No 125
>1zvf_A 3-hydroxyanthranilate 3,4-dioxygenase; jellyroll beta-barrel, oxidoreductase; 2.41A {Saccharomyces cerevisiae} SCOP: b.82.1.20
Probab=20.33 E-value=95 Score=26.85 Aligned_cols=36 Identities=8% Similarity=0.098 Sum_probs=29.2
Q ss_pred eEEEeecCCCccccccCCCcceeeEeecceEEEEeec
Q psy4445 201 LMILCWGEGHGSSVHDHADAHCFMKMLDGCLTETRYA 237 (279)
Q Consensus 201 lvll~W~pGQ~SpIHDH~gshC~~kVL~G~l~E~rY~ 237 (279)
+|..+++|++++.-| |...-=+..+|+|.|....-+
T Consensus 36 ~V~~vgGPn~r~D~H-~~~~eE~Fy~lkG~m~l~v~d 71 (176)
T 1zvf_A 36 TVMIVGGPNERTDYH-INPTPEWFYQKKGSMLLKVVD 71 (176)
T ss_dssp EEEEECSSBCCSCEE-ECSSCEEEEEEESCEEEEEEE
T ss_pred EEEEEcCCCcCCcCc-CCCCceEEEEEeCEEEEEEEc
Confidence 456688999999999 555588999999999887554
No 126
>2vpv_A Protein MIF2, MIF2P; nucleus, mitosis, centromere, cell cycle, DNA-binding, kinetochore, cell division, phosphoprotein, jelly-roll fold; 2.7A {Saccharomyces cerevisiae}
Probab=20.09 E-value=1.1e+02 Score=25.64 Aligned_cols=57 Identities=12% Similarity=0.031 Sum_probs=38.4
Q ss_pred CCcceeEEEeecC-CCcccc-ccCCCcceeeEeecceEEEEeecCCCCCCCCCCCcceeecceeecCCCeeEEcCC
Q psy4445 196 NDKFNLMILCWGE-GHGSSV-HDHADAHCFMKMLDGCLTETRYAWPQTDEDGEEKPLQVIGKSPLKLNEVCYINGK 269 (279)
Q Consensus 196 ~~~~elvll~W~p-GQ~SpI-HDH~gshC~~kVL~G~l~E~rY~~p~~~~~g~~~pL~~~~~~~l~~geVtYIsD~ 269 (279)
.+.++.+++.=.| |+.++- |.|.+ .=++.||+|+++-+.= + ...++.+|+..|+...
T Consensus 85 ~~~~~~~~v~lpP~G~~~~~~~~h~g-EE~~yVLeG~v~vtl~----g------------~~~~L~~Gds~~iP~g 143 (166)
T 2vpv_A 85 KEYFASGILKLPAISGQKKLSNSFRT-YITFHVIQGIVEVTVC----K------------NKFLSVKGSTFQIPAF 143 (166)
T ss_dssp TCSCEEEEEEECSSGGGCEEEECCSE-EEEEEEEESEEEEEET----T------------EEEEEETTCEEEECTT
T ss_pred cccceeEEEEECCCCCCCCCccCCCc-eEEEEEEEeEEEEEEC----C------------EEEEEcCCCEEEECCC
Confidence 3577888888899 765444 55655 7788899999887651 1 1235677777777543
No 127
>3es1_A Cupin 2, conserved barrel domain protein; YP_001165807.1; HET: MSE; 1.91A {Novosphingobium aromaticivorans dsm 12ORGANISM_TAXID}
Probab=20.03 E-value=73 Score=26.80 Aligned_cols=29 Identities=10% Similarity=0.068 Sum_probs=23.9
Q ss_pred CCceeEEEEeecCCCCCccccCCCCceee
Q psy4445 138 NDKFNLMILCWGEGHGSSVHDHADAHCFM 166 (279)
Q Consensus 138 ngk~nL~~LcW~pGq~S~IHdH~~ahC~~ 166 (279)
.+.+.++.+...||..++.|-|.+...++
T Consensus 76 ~~G~~~~~v~l~PG~~~~~H~H~~eE~~~ 104 (172)
T 3es1_A 76 DGGSVIRVVDMLPGKESPMHRTNSIDYGI 104 (172)
T ss_dssp TCSEEEEEEEECTTCBCCCBCCSEEEEEE
T ss_pred CCCeEEEEEEECCCCCCCCeecCceEEEE
Confidence 45688888899999999999998865544
Done!