BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4448
(487 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6P1N9|TATD1_HUMAN Putative deoxyribonuclease TATDN1 OS=Homo sapiens GN=TATDN1 PE=1
SV=2
Length = 297
Score = 251 bits (640), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 129/265 (48%), Positives = 173/265 (65%), Gaps = 18/265 (6%)
Query: 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLK 60
K+IDIG NL D M+ G Y QKH+ D+ V+ RA G++K ++TG N++DS +L
Sbjct: 4 FKFIDIGINLTDPMFRGIYRGV-QKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALH 62
Query: 61 LAQSDERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQY 119
LAQ++ +STVGCHPTRC EFE N+P+ YL+ L + + KVVA GE GLD+DR+Q+
Sbjct: 63 LAQTNGMFFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQF 122
Query: 120 CPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPF 179
CP +TQLKYF KQ +LS KLP+FLHCRN+ ++F++IMK + GV+HSFDGT
Sbjct: 123 CPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCV-GGVVHSFDGTKE 181
Query: 180 QAVD-------------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQ 226
A SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YIRT
Sbjct: 182 AAAALIDLDLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTA 241
Query: 227 HEKVKKEQWKPDKMVKSRNEPANIV 251
KK W+ +K RNEP +I+
Sbjct: 242 FPTKKK--WESGHCLKDRNEPCHII 264
Score = 148 bits (374), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 78/168 (46%), Positives = 107/168 (63%), Gaps = 16/168 (9%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD---- 307
YF KQ +LS KLP+FLHCRN+ ++F++IMK + GV+HSFDGT A
Sbjct: 131 YFEKQFELSEQTKLPMFLHCRNSHAEFLDIMKRNRDRCV-GGVVHSFDGTKEAAAALIDL 189
Query: 308 ---------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQ 358
SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YIRT KK
Sbjct: 190 DLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPTKKK-- 247
Query: 359 WKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFP 406
W+ +K RNEP +I+QILEI++AVR + +L ++ NT+++FFP
Sbjct: 248 WESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKVFFP 295
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 45/60 (75%), Gaps = 1/60 (1%)
Query: 429 LYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQL 487
+STVGCHPTRC EFE N+P+ YL+ L + + KVVA GE GLD+DR+Q+CP +TQL
Sbjct: 70 FFSTVGCHPTRCGEFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQL 129
>sp|Q6GML7|TATD1_DANRE Putative deoxyribonuclease TATDN1 OS=Danio rerio GN=tatdn1 PE=2
SV=1
Length = 298
Score = 248 bits (632), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/265 (47%), Positives = 171/265 (64%), Gaps = 18/265 (6%)
Query: 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLK 60
++IDIG NL D M+ G Y QKHE D V+ RA G++K I+TG N+EDS ++L
Sbjct: 4 FRFIDIGINLTDPMFRGVYRG-TQKHEDDFAEVVERALQVGVQKFIITGGNLEDSRAALT 62
Query: 61 LAQSDERLYSTVGCHPTRCSEFEND-PEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQY 119
L + E+ +STVGCHPTRCSEF++ + YL SL + +KVVA GE GLD+DR+++
Sbjct: 63 LTHTREQFFSTVGCHPTRCSEFDDQGSDQYLSSLLDLTVSNTQKVVAVGECGLDFDRLEF 122
Query: 120 CPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP- 178
CP ETQL+YF+ Q DL+ LP+FLHCRNA ++FI+IM+ + GV+HSFDG+
Sbjct: 123 CPKETQLRYFQLQFDLAEASGLPMFLHCRNAHTEFIDIMRRNRQRCV-GGVVHSFDGSQQ 181
Query: 179 ----------FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQ 226
+ ++ SLKT ENLE +KSIP DRL++ETD PWC +K +HAG I+T
Sbjct: 182 DAAALLDLDLYIGINGCSLKTAENLEVMKSIPSDRLMIETDAPWCGIKNTHAGAKLIKTS 241
Query: 227 HEKVKKEQWKPDKMVKSRNEPANIV 251
KK W+ VK RNEP +I+
Sbjct: 242 FPTKKK--WETGHCVKDRNEPCHII 264
Score = 141 bits (355), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 102/167 (61%), Gaps = 16/167 (9%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP--------- 302
YF+ Q DL+ LP+FLHCRNA ++FI+IM+ + GV+HSFDG+
Sbjct: 131 YFQLQFDLAEASGLPMFLHCRNAHTEFIDIMRRNRQRCV-GGVVHSFDGSQQDAAALLDL 189
Query: 303 --FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQ 358
+ ++ SLKT ENLE +KSIP DRL++ETD PWC +K +HAG I+T KK
Sbjct: 190 DLYIGINGCSLKTAENLEVMKSIPSDRLMIETDAPWCGIKNTHAGAKLIKTSFPTKKK-- 247
Query: 359 WKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405
W+ VK RNEP +I+Q+LE++AAVR + L I NT LFF
Sbjct: 248 WETGHCVKDRNEPCHIIQVLEVMAAVREEDPLDLAETIFNNTDTLFF 294
Score = 75.9 bits (185), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 427 ERLYSTVGCHPTRCSEFEND-PEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVET 485
E+ +STVGCHPTRCSEF++ + YL SL + +KVVA GE GLD+DR+++CP ET
Sbjct: 68 EQFFSTVGCHPTRCSEFDDQGSDQYLSSLLDLTVSNTQKVVAVGECGLDFDRLEFCPKET 127
Query: 486 QL 487
QL
Sbjct: 128 QL 129
>sp|Q640V9|TATD1_XENLA Putative deoxyribonuclease TATDN1 OS=Xenopus laevis GN=tatdn1 PE=2
SV=1
Length = 297
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/264 (46%), Positives = 173/264 (65%), Gaps = 18/264 (6%)
Query: 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKL 61
++IDIG NL D M+ G Y +KH+ D ++ RA G++K ++TG N+ +S +++L
Sbjct: 5 RFIDIGINLTDPMFRGLYRG-TRKHQDDFADIIERAVRTGVQKFMITGGNLHESKEAIQL 63
Query: 62 AQSDERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYC 120
AQS++R YSTVGCHPTRC EFE DP+ YL L ++++ KVVA GE GLD+DR+++C
Sbjct: 64 AQSNDRFYSTVGCHPTRCGEFEQGDPDQYLAELQNLLEDNKGKVVAVGECGLDFDRLEFC 123
Query: 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--- 177
ETQLKYF KQ DL+ +LP+FLHCRNA +F+EIM+ + GV+HSFDGT
Sbjct: 124 SKETQLKYFEKQFDLAERSRLPMFLHCRNAHKEFLEIMQRNRDRCV-GGVVHSFDGTKED 182
Query: 178 --PFQAVD--------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQH 227
A+D SLKT+ NL+ +KSIP +RL++ETD PWC VK +HAG ++T
Sbjct: 183 AEAIIALDLYIGINGCSLKTESNLDVLKSIPSERLMIETDAPWCGVKNTHAGSKLVKTTF 242
Query: 228 EKVKKEQWKPDKMVKSRNEPANIV 251
KK W+ +K RNEP +I+
Sbjct: 243 PTKKK--WESGHCLKDRNEPCHII 264
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/168 (45%), Positives = 106/168 (63%), Gaps = 16/168 (9%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT-----PFQAV 306
YF KQ DL+ +LP+FLHCRNA +F+EIM+ + GV+HSFDGT A+
Sbjct: 131 YFEKQFDLAERSRLPMFLHCRNAHKEFLEIMQRNRDRCV-GGVVHSFDGTKEDAEAIIAL 189
Query: 307 D--------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQ 358
D SLKT+ NL+ +KSIP +RL++ETD PWC VK +HAG ++T KK
Sbjct: 190 DLYIGINGCSLKTESNLDVLKSIPSERLMIETDAPWCGVKNTHAGSKLVKTTFPTKKK-- 247
Query: 359 WKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFP 406
W+ +K RNEP +I+Q+LEI+A+ R E +L ++ NTL+LFFP
Sbjct: 248 WESGHCLKDRNEPCHIIQVLEIMASAREEEPLELSKTLYNNTLKLFFP 295
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 46/62 (74%), Gaps = 1/62 (1%)
Query: 427 ERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVET 485
+R YSTVGCHPTRC EFE DP+ YL L ++++ KVVA GE GLD+DR+++C ET
Sbjct: 68 DRFYSTVGCHPTRCGEFEQGDPDQYLAELQNLLEDNKGKVVAVGECGLDFDRLEFCSKET 127
Query: 486 QL 487
QL
Sbjct: 128 QL 129
>sp|Q148G4|TATD1_BOVIN Putative deoxyribonuclease TATDN1 OS=Bos taurus GN=TATDN1 PE=2 SV=1
Length = 297
Score = 247 bits (631), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 126/264 (47%), Positives = 172/264 (65%), Gaps = 18/264 (6%)
Query: 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKL 61
K++DIG NL D M+ G Y QKH+ D+ V+ RA G++K ++TG N++DS +L L
Sbjct: 5 KFVDIGINLTDPMFRGIYRGV-QKHQDDLQDVIERAVQIGVKKFMITGGNLQDSKDALHL 63
Query: 62 AQSDERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYC 120
AQ+++ +STVGCHPTRC EFE NDP+ YL L + + KVVA GE GLD+DR+Q+C
Sbjct: 64 AQTNDMFFSTVGCHPTRCDEFEKNDPDHYLMELLNLAESNKGKVVAIGECGLDFDRLQFC 123
Query: 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ 180
+TQLKYF KQ +LS KLP+FLHCRN+ ++F++IM+ + GV+HSFDGT
Sbjct: 124 SKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDIMRRNRDRCV-GGVVHSFDGTKEA 182
Query: 181 AVD-------------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQH 227
A SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YI+T
Sbjct: 183 AAALMDLGLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKNTHAGSKYIKTSF 242
Query: 228 EKVKKEQWKPDKMVKSRNEPANIV 251
KK W+ +K RNEP +I+
Sbjct: 243 PTKKK--WENGHCLKDRNEPCHII 264
Score = 146 bits (368), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 107/168 (63%), Gaps = 16/168 (9%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD---- 307
YF KQ +LS KLP+FLHCRN+ ++F++IM+ + GV+HSFDGT A
Sbjct: 131 YFEKQFELSEQTKLPMFLHCRNSHAEFLDIMRRNRDRCV-GGVVHSFDGTKEAAAALMDL 189
Query: 308 ---------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQ 358
SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YI+T KK
Sbjct: 190 GLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKNTHAGSKYIKTSFPTKKK-- 247
Query: 359 WKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFP 406
W+ +K RNEP +I+QILEI++AVR + +L ++ NT+++FFP
Sbjct: 248 WENGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNNTIKIFFP 295
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 427 ERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVET 485
+ +STVGCHPTRC EFE NDP+ YL L + + KVVA GE GLD+DR+Q+C +T
Sbjct: 68 DMFFSTVGCHPTRCDEFEKNDPDHYLMELLNLAESNKGKVVAIGECGLDFDRLQFCSKDT 127
Query: 486 QL 487
QL
Sbjct: 128 QL 129
>sp|Q6P8M1|TATD1_MOUSE Putative deoxyribonuclease TATDN1 OS=Mus musculus GN=Tatdn1 PE=2
SV=1
Length = 295
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 125/265 (47%), Positives = 173/265 (65%), Gaps = 18/265 (6%)
Query: 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLK 60
K++DIG NL D M+ G Y QKH+ D+ V+ RA G++K ++TG +++DS +L+
Sbjct: 4 FKFVDIGINLTDPMFRGIYRGV-QKHQDDLQDVIERAIQIGVKKFMITGGSLQDSKDALQ 62
Query: 61 LAQSDERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQY 119
LAQ+++ +STVGCHPTRC EFE P+ YL L + + KVVA GE GLD+DR+Q+
Sbjct: 63 LAQTNDMFFSTVGCHPTRCDEFEKGSPDQYLAGLLSLAENNKGKVVAIGECGLDFDRLQF 122
Query: 120 CPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPF 179
CP +TQLKYF KQ +LS +LP+FLHCRN+ ++F++IM+ + GV+HSFDGT
Sbjct: 123 CPKDTQLKYFEKQFELSEQTQLPMFLHCRNSHTEFLDIMRRNRDRYV-GGVVHSFDGTKE 181
Query: 180 QA---VD----------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQ 226
A VD SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YI T
Sbjct: 182 AAAALVDLGLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYINTS 241
Query: 227 HEKVKKEQWKPDKMVKSRNEPANIV 251
KK W+ +K RNEP +I+
Sbjct: 242 FPTKKK--WENGHCLKDRNEPCHII 264
Score = 141 bits (356), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 107/167 (64%), Gaps = 16/167 (9%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA---VD- 307
YF KQ +LS +LP+FLHCRN+ ++F++IM+ + GV+HSFDGT A VD
Sbjct: 131 YFEKQFELSEQTQLPMFLHCRNSHTEFLDIMRRNRDRYV-GGVVHSFDGTKEAAAALVDL 189
Query: 308 ---------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQ 358
SLKT+ NLE +KSIP ++L++ETD PWC VK +HAG YI T KK
Sbjct: 190 GLYIGFNGCSLKTEANLEVLKSIPSEKLMIETDAPWCGVKSTHAGSKYINTSFPTKKK-- 247
Query: 359 WKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405
W+ +K RNEP +I+QILEI++AVR + +L ++ NT+++FF
Sbjct: 248 WENGHCLKDRNEPCHIIQILEIMSAVREEDPLELANTLYNNTIKVFF 294
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 427 ERLYSTVGCHPTRCSEFE-NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVET 485
+ +STVGCHPTRC EFE P+ YL L + + KVVA GE GLD+DR+Q+CP +T
Sbjct: 68 DMFFSTVGCHPTRCDEFEKGSPDQYLAGLLSLAENNKGKVVAIGECGLDFDRLQFCPKDT 127
Query: 486 QL 487
QL
Sbjct: 128 QL 129
>sp|Q9UUF1|YNF8_SCHPO Deoxyribonuclease Tat-D OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pi038 PE=3 SV=1
Length = 312
Score = 234 bits (598), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 123/269 (45%), Positives = 175/269 (65%), Gaps = 21/269 (7%)
Query: 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLK 60
+++ DIG N D ++ G Y K KH D D +++RA G+EK+++TG NVE+S +L
Sbjct: 12 LRFYDIGYNATDPVFRGIYHEK-LKHPDDFDSIISRAKAVGVEKMMITGDNVENSEEALN 70
Query: 61 LAQSDERLYSTVGCHPTRCSEF---ENDPEGYLQSLDKIIKEG--GKKVVAFGEFGLDYD 115
LA + E STVG HP + F PE YL L+ + +G KVVAFGEFGLDYD
Sbjct: 71 LATNYECFTSTVGVHPCQAQCFLRHSEGPEDYLVKLEALANKGKASGKVVAFGEFGLDYD 130
Query: 116 RVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFD 175
R+ Y P + Q YF +QL ++V +LPLFLH RNA++DF I+++Y P+LP+KGV+HSF
Sbjct: 131 RLHYAPADVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPELPKKGVVHSFT 190
Query: 176 GTP-----------FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAY 222
G+ + V+ SLKT+ENLE V++IP +++LLETD PWCEV+PSHAG +
Sbjct: 191 GSIDEMRRCIEHGLYVGVNGCSLKTEENLEVVRAIPLEKMLLETDAPWCEVRPSHAGHQF 250
Query: 223 IRTQ--HEKVKKEQWKPDKMVKSRNEPAN 249
++T+ + KKE++K M++ RNEP N
Sbjct: 251 LKTKLPFDSCKKERFKEGCMIRGRNEPCN 279
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/175 (44%), Positives = 120/175 (68%), Gaps = 17/175 (9%)
Query: 247 PANI--VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP-- 302
PA++ +YF +QL ++V +LPLFLH RNA++DF I+++Y P+LP+KGV+HSF G+
Sbjct: 136 PADVQKMYFEEQLKVAVRVQLPLFLHSRNAENDFFAILEKYLPELPKKGVVHSFTGSIDE 195
Query: 303 ---------FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQ- 350
+ V+ SLKT+ENLE V++IP +++LLETD PWCEV+PSHAG +++T+
Sbjct: 196 MRRCIEHGLYVGVNGCSLKTEENLEVVRAIPLEKMLLETDAPWCEVRPSHAGHQFLKTKL 255
Query: 351 -HEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+ KKE++K M++ RNEP N + EIVAA++ + E+L I +N++ L
Sbjct: 256 PFDSCKKERFKEGCMIRGRNEPCNTYIVAEIVAALKDISLEELSEQIWENSINLL 310
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 36/61 (59%), Gaps = 5/61 (8%)
Query: 431 STVGCHPTRCSEF---ENDPEGYLQSLDKIIKEG--GKKVVAFGEFGLDYDRVQYCPVET 485
STVG HP + F PE YL L+ + +G KVVAFGEFGLDYDR+ Y P +
Sbjct: 80 STVGVHPCQAQCFLRHSEGPEDYLVKLEALANKGKASGKVVAFGEFGLDYDRLHYAPADV 139
Query: 486 Q 486
Q
Sbjct: 140 Q 140
>sp|P34220|YBF5_YEAST Deoxyribonuclease Tat-D OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YBL055C PE=1 SV=1
Length = 418
Score = 145 bits (366), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 114/352 (32%), Positives = 160/352 (45%), Gaps = 103/352 (29%)
Query: 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLK 60
+KY DIG NL D M+ G Y+ K Q H D +L RA ++ +VTG+++ +S S+++
Sbjct: 36 LKYYDIGLNLTDPMFHGIYNGK-QYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIE 94
Query: 61 LAQSDE-----RLYSTVGCHPTRCSEFENDPEG---------------YLQSL-DKIIK- 98
L S + +LY T+G HP +EF + +G Y +SL K+I
Sbjct: 95 LVSSVKDLSPLKLYHTIGVHPCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISN 154
Query: 99 ----EGGKKVV----------------AFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVT 138
+G K + + GE GLDYDR Y E Q +F +QL +S
Sbjct: 155 PSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCL 214
Query: 139 H----KLPLFLHCRNAKSDFIEIMKEYAPKLP-------------------------RKG 169
+ PLFLH R+A DF++I++ + RK
Sbjct: 215 NDKLSSYPLFLHMRSACDDFVQILERFIAGFTDERDTFQLQKLGASSSSGFYKFHPDRKL 274
Query: 170 VIHSFDGTP-------------FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWCEVK 214
V+HSF G+ F V+ SL+T+ENL VK IP +RLLLETD PWCE+K
Sbjct: 275 VVHSFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERLLLETDAPWCEIK 334
Query: 215 PSHAGFAYIRTQHE---------KVKKEQWKPDK-------MVKSRNEPANI 250
+HA F Y+ E K K+ DK MVK RNEP N+
Sbjct: 335 RTHASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAEELYMVKGRNEPCNM 386
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 99/214 (46%), Gaps = 60/214 (28%)
Query: 251 VYFRKQLDLSVTH----KLPLFLHCRNAKSDFIEIMKEYAPKLP---------------- 290
V+F +QL +S + PLFLH R+A DF++I++ +
Sbjct: 203 VFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFIAGFTDERDTFQLQKLGASSS 262
Query: 291 ---------RKGVIHSFDGTP-------------FQAVD--SLKTKENLETVKSIPEDRL 326
RK V+HSF G+ F V+ SL+T+ENL VK IP +RL
Sbjct: 263 SGFYKFHPDRKLVVHSFTGSAIDLQKLLNLSPNIFIGVNGCSLRTEENLAVVKQIPTERL 322
Query: 327 LLETDCPWCEVKPSHAGFAYIRTQHE---------KVKKEQWKPDK-------MVKSRNE 370
LLETD PWCE+K +HA F Y+ E K K+ DK MVK RNE
Sbjct: 323 LLETDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAEELYMVKGRNE 382
Query: 371 PANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
P N+ Q+ +V+ V+ V+ L + T ++F
Sbjct: 383 PCNMEQVAIVVSEVKDVDLATLIDTTWKTTCKIF 416
>sp|Q8SW70|TATD1_ENCCU Putative deoxyribonuclease TATDN1 homolog OS=Encephalitozoon
cuniculi (strain GB-M1) GN=ECU03_0200 PE=3 SV=1
Length = 273
Score = 120 bits (301), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/262 (32%), Positives = 134/262 (51%), Gaps = 47/262 (17%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
IDI N+ D + K E ++ V+ R ++ + I TG + + S + LA+
Sbjct: 3 IDIAVNITDKLL--------AKDESSVEEVIRRCKDSKVLPIF-TGLDHQTSKICINLAK 53
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKII-KEGGKKVVAFGEFGLDYDRVQYCPV 122
+ ST G HPT S + N +D+I+ + VVA GE GLDYDR+++
Sbjct: 54 K-YKTVSTAGIHPTSSSRYSN--------IDEIVPLVNDETVVAIGECGLDYDRLEFADK 104
Query: 123 ETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAV 182
+Q + FR QLDL + F H R+ DF+EI+ +Y + GV+HSF G+ +A
Sbjct: 105 VSQKRIFRSQLDLGGS---CYFFHSRSCHRDFMEIVSDYRIR----GVVHSFTGSIEEAR 157
Query: 183 D-------------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEK 229
+ S+KT E +E V+S+P + LL+ETD P+C+++ S+AGF Y+ T
Sbjct: 158 ELIKKGLFIGINGCSVKTLEGIEIVRSLPLESLLIETDSPYCKIRRSYAGFEYVTT---- 213
Query: 230 VKKEQWKPDKMVKSRNEPANIV 251
+ K +K +NEP +V
Sbjct: 214 ----DFSQQKALKKKNEPCCVV 231
Score = 94.4 bits (233), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 28/165 (16%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD----- 307
FR QLDL + F H R+ DF+EI+ +Y + GV+HSF G+ +A +
Sbjct: 111 FRSQLDLGGS---CYFFHSRSCHRDFMEIVSDYRIR----GVVHSFTGSIEEARELIKKG 163
Query: 308 --------SLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQW 359
S+KT E +E V+S+P + LL+ETD P+C+++ S+AGF Y+ T +
Sbjct: 164 LFIGINGCSVKTLEGIEIVRSLPLESLLIETDSPYCKIRRSYAGFEYVTT--------DF 215
Query: 360 KPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K +K +NEP +VQ+ E+V+ G + + + I NT+ L+
Sbjct: 216 SQQKALKKKNEPCCVVQMAEVVSNATGKDYDLVVETILDNTIGLY 260
Score = 37.4 bits (85), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%), Gaps = 9/51 (17%)
Query: 431 STVGCHPTRCSEFENDPEGYLQSLDKII-KEGGKKVVAFGEFGLDYDRVQY 480
ST G HPT S + N +D+I+ + VVA GE GLDYDR+++
Sbjct: 59 STAGIHPTSSSRYSN--------IDEIVPLVNDETVVAIGECGLDYDRLEF 101
>sp|B2VG45|TATD_ERWT9 Tat-linked quality control protein TatD OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=tatD PE=3 SV=1
Length = 259
Score = 117 bits (294), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/225 (35%), Positives = 109/225 (48%), Gaps = 35/225 (15%)
Query: 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA 62
DIG NL + D D V+ RA AG+ +++TGTN +S +L LA
Sbjct: 1 MFDIGVNLTSTQFAK-----------DRDKVIKRAREAGVSGMLITGTNALESQQALSLA 49
Query: 63 -QSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCP 121
Q + +ST G HP SE+ + L+ L + ++VA GE GLD++R +
Sbjct: 50 RQHPDYCWSTAGVHPHHASEWSGETAATLRRLAE-----SPQMVAIGECGLDFNR-NFSD 103
Query: 122 VETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP--- 178
E Q F QL L+ LP+FLHCR A FI I+K + PKL + V+H F GT
Sbjct: 104 PEQQAYAFNAQLALAAELSLPVFLHCREAHERFISILKPWLPKL-KAAVLHCFTGTRPEL 162
Query: 179 --------FQAV-----DSLKTKENLETVKSIPEDRLLLETDCPW 210
F + D + +E E + IP DRLLLETD PW
Sbjct: 163 ESCLAEGLFIGITGWICDERRGQELRELMPLIPADRLLLETDAPW 207
Score = 72.4 bits (176), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/180 (32%), Positives = 80/180 (44%), Gaps = 44/180 (24%)
Query: 245 NEPANIVY-FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP- 302
++P Y F QL L+ LP+FLHCR A FI I+K + PKL + V+H F GT
Sbjct: 102 SDPEQQAYAFNAQLALAAELSLPVFLHCREAHERFISILKPWLPKL-KAAVLHCFTGTRP 160
Query: 303 ----------FQAV-----DSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGF 344
F + D + +E E + IP DRLLLETD PW +++P
Sbjct: 161 ELESCLAEGLFIGITGWICDERRGQELRELMPLIPADRLLLETDAPWLLPRDMRPR---- 216
Query: 345 AYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
P + RNEP + I++ VA +RG + +L N RLF
Sbjct: 217 ---------------PPSR----RNEPCFLPHIVQQVALLRGDDAGELAAQTALNARRLF 257
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 5/59 (8%)
Query: 419 VSFAPYEIERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDR 477
+S A + +ST G HP SE+ + L+ L + ++VA GE GLD++R
Sbjct: 46 LSLARQHPDYCWSTAGVHPHHASEWSGETAATLRRLAE-----SPQMVAIGECGLDFNR 99
>sp|D4ICL5|TATD_ERWAE Tat-linked quality control protein TatD OS=Erwinia amylovora
(strain ATCC 49946 / CCPPB 0273 / Ea273 / 27-3) GN=tatD
PE=3 SV=1
Length = 259
Score = 116 bits (290), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 79/223 (35%), Positives = 105/223 (47%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA-Q 63
DIG NL + D D V+ RA AG+ +++TGTN +S +L LA Q
Sbjct: 3 DIGVNLTSTQFA-----------KDRDKVVKRAREAGISGMLITGTNALESQQALSLARQ 51
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP SE+ + L+ L + VVA GE GLD++R + E
Sbjct: 52 HANYCWSTAGVHPHHASEWSAETAATLRRLAE-----SPLVVAIGECGLDFNR-NFSQPE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q+ F QL L+ LP+FLHCR A FI I+K + P L + V+H F G +
Sbjct: 106 QQVYAFNAQLALAAELSLPVFLHCREAHERFITILKPWLPSL-KAAVLHCFTGARAELES 164
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + +E E V IP DRLLLETD PW
Sbjct: 165 CLAEGLSIGITGWICDERRGQELRELVPLIPADRLLLETDAPW 207
Score = 70.1 bits (170), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 78/180 (43%), Gaps = 44/180 (24%)
Query: 245 NEPANIVY-FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPF 303
++P VY F QL L+ LP+FLHCR A FI I+K + P L + V+H F G
Sbjct: 102 SQPEQQVYAFNAQLALAAELSLPVFLHCREAHERFITILKPWLPSL-KAAVLHCFTGARA 160
Query: 304 Q----------------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGF 344
+ D + +E E V IP DRLLLETD PW +++P
Sbjct: 161 ELESCLAEGLSIGITGWICDERRGQELRELVPLIPADRLLLETDAPWLLPRDMRPR---- 216
Query: 345 AYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
P + RNEP + I++ VA +RG + ++L N LF
Sbjct: 217 ---------------PPSR----RNEPCFLPHIVQQVALLRGDDVDELAAQTALNARALF 257
>sp|A4WFX9|TATD_ENT38 Tat-linked quality control protein TatD OS=Enterobacter sp. (strain
638) GN=tatD PE=3 SV=2
Length = 260
Score = 115 bits (289), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 117/223 (52%), Gaps = 34/223 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + D D V+ RA+ AG++ +++TGTN+ +S + +LAQ
Sbjct: 2 FDIGLNLTSPQFAN-----------DRDDVVARAFAAGVKGLLLTGTNLHESEHAQQLAQ 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
ER +ST G HP S++ ++ L L K ++VVA GE GLD++R PVE
Sbjct: 51 GYERCWSTAGVHPHDSSQWTDESAETLYKLAKT-----EEVVAIGECGLDFNRNFSTPVE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F QL ++ ++P+F+HCR+A F+ +++ + KLP V+H F G+ +AV+
Sbjct: 106 -QEAAFTAQLAIAAELEMPVFMHCRDAHERFLTLLEPWRDKLP-GAVLHCFTGSRQEAVE 163
Query: 184 SL----------------KTKENLETVKSIPEDRLLLETDCPW 210
L + E E + IP DRLL+ETD P+
Sbjct: 164 CLNRGLYLGITGWVCDERRGLELRELLPVIPADRLLVETDAPY 206
Score = 73.6 bits (179), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL--- 309
F QL ++ ++P+F+HCR+A F+ +++ + KLP V+H F G+ +AV+ L
Sbjct: 110 FTAQLAIAAELEMPVFMHCRDAHERFLTLLEPWRDKLP-GAVLHCFTGSRQEAVECLNRG 168
Query: 310 -------------KTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ E E + IP DRLL+ETD P+ ++KP
Sbjct: 169 LYLGITGWVCDERRGLELRELLPVIPADRLLVETDAPYLLPRDMKP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEPA + I+E +A RG ER++L +N RLF
Sbjct: 215 ---------KPASRRNEPAYLGHIVERIAHWRGEERQRLDAQTDENVRRLF 256
Score = 39.7 bits (91), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 427 ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQ 486
ER +ST G HP S++ ++ L L K ++VVA GE GLD++R PVE +
Sbjct: 53 ERCWSTAGVHPHDSSQWTDESAETLYKLAKT-----EEVVAIGECGLDFNRNFSTPVEQE 107
>sp|A7MQN1|TATD_CROS8 Tat-linked quality control protein TatD OS=Cronobacter sakazakii
(strain ATCC BAA-894) GN=tatD PE=3 SV=2
Length = 263
Score = 109 bits (272), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/223 (32%), Positives = 113/223 (50%), Gaps = 34/223 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG N+ + ++ D D ++ RA AG+ ++ TGT++E+S + A+
Sbjct: 2 FDIGLNITSSQFDH-----------DRDEMIARARAAGVSNMLFTGTSLEESEKACAFAR 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
E +ST G HP S + ++ L++L G +VVA GE GLD++R P E
Sbjct: 51 RYEGCWSTAGVHPHDASTWNDESAARLRAL-----AGEAQVVAIGECGLDFNRNFSTPAE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F +QL L+ LP+FLHCR+A + F+ ++ + KLP V+H F GT +A +
Sbjct: 106 -QEHAFTEQLRLAAELALPVFLHCRDAHARFLALLDPWLDKLP-GAVLHCFTGTEQEARE 163
Query: 184 SLKT-------------KENLE---TVKSIPEDRLLLETDCPW 210
++ + LE + IP DRLLLETD P+
Sbjct: 164 TMARGLYLGITGWVCDERRGLELRALLPVIPADRLLLETDAPY 206
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 75/175 (42%), Gaps = 37/175 (21%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT- 311
F +QL L+ LP+FLHCR+A + F+ ++ + KLP V+H F GT +A +++
Sbjct: 110 FTEQLRLAAELALPVFLHCRDAHARFLALLDPWLDKLP-GAVLHCFTGTEQEARETMARG 168
Query: 312 ------------KENLET---VKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
+ LE + IP DRLLLETD P + R + K
Sbjct: 169 LYLGITGWVCDERRGLELRALLPVIPADRLLLETDAP----------YLLPRDLAPRPKS 218
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHELPT 411
RNEP + IL+ VA RG + L N RLF + P
Sbjct: 219 R----------RNEPCWLPHILKQVAQWRGEDPAWLEATTDANAARLFLKNASPA 263
Score = 38.5 bits (88), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 427 ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQ 486
E +ST G HP S + ++ L++L G +VVA GE GLD++R P E +
Sbjct: 53 EGCWSTAGVHPHDASTWNDESAARLRAL-----AGEAQVVAIGECGLDFNRNFSTPAEQE 107
>sp|A8ACY8|TATD_CITK8 Tat-linked quality control protein TatD OS=Citrobacter koseri
(strain ATCC BAA-895 / CDC 4225-83 / SGSC4696) GN=tatD
PE=3 SV=2
Length = 260
Score = 108 bits (271), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 124/260 (47%), Gaps = 46/260 (17%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + + D D V+ RA AG+ +++TGTN+ +S + KLAQ
Sbjct: 2 FDIGVNLTSSQFV-----------KDRDDVVTRALAAGVSGMLLTGTNLHESQQAQKLAQ 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S+++++ E + +L + VVA GE GLD++R P E
Sbjct: 51 RYACCWSTAGVHPHDSSQWQSETEDAIVALAR-----QPDVVAIGECGLDFNRNFSTPQE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q + F+ QL ++ ++P+F+HCR+A + F+ +++ + KLP V+H F GT +
Sbjct: 106 -QERAFQAQLRIAAELQMPVFMHCRDAHARFLALLEPWLDKLP-GAVLHCFTGTREEMQE 163
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPWC------------EVKP 215
D + E E + IP ++LL+ETD P+ +P
Sbjct: 164 CIDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTPKPASRRNEP 223
Query: 216 SHAGFAYIRTQHEKVKKEQW 235
+H R H + + QW
Sbjct: 224 AHLAHILARVAHWRGEDPQW 243
Score = 60.5 bits (145), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 74/171 (43%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F+ QL ++ ++P+F+HCR+A + F+ +++ + KLP V+H F GT +
Sbjct: 110 FQAQLRIAAELQMPVFMHCRDAHARFLALLEPWLDKLP-GAVLHCFTGTREEMQECIDRG 168
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP ++LL+ETD P+ ++ P
Sbjct: 169 LYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEPA++ IL VA RG + + L N LF
Sbjct: 215 ---------KPASRRNEPAHLAHILARVAHWRGEDPQWLAATTDANVKTLF 256
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 5/57 (8%)
Query: 430 YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQ 486
+ST G HP S+++++ E + +L + VVA GE GLD++R P E +
Sbjct: 56 WSTAGVHPHDSSQWQSETEDAIVALAR-----QPDVVAIGECGLDFNRNFSTPQEQE 107
>sp|E3G381|TATD_ENTCS Tat-linked quality control protein TatD OS=Enterobacter cloacae
(strain SCF1) GN=tatD PE=3 SV=1
Length = 260
Score = 108 bits (270), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 77/260 (29%), Positives = 121/260 (46%), Gaps = 46/260 (17%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + D D V+ RA+ AGL +++TGT++ +S +L LAQ
Sbjct: 2 FDIGVNLTSPQFA-----------RDHDAVVARAFAAGLSGMLLTGTSLHESEQALALAQ 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
R +ST G HP S + + E +++L + +VVA GE GLD++R P +
Sbjct: 51 RHARCWSTAGVHPHDSSRWTRETEQRIRTLAQ-----APEVVAIGECGLDFNRNFSTP-Q 104
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F QL L+ +P+FLHCR+A F+ ++ + KLP V+H F GT + D
Sbjct: 105 AQEAAFSAQLALAAECGMPVFLHCRDAHERFMALLTPWLDKLP-GAVLHCFTGTRDELQD 163
Query: 184 SLK-------------TKENL---ETVKSIPEDRLLLETDCPWC------------EVKP 215
L+ + L + + IP +RL++ETD P+ +P
Sbjct: 164 CLRHGLYIGITGWVCDERRGLALRDMLPLIPANRLMVETDAPYLLPRDMTPKPGSRRNEP 223
Query: 216 SHAGFAYIRTQHEKVKKEQW 235
++ R H + + QW
Sbjct: 224 AYLAHIMARIAHWRGEDAQW 243
Score = 56.2 bits (134), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 72/171 (42%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK-- 310
F QL L+ +P+FLHCR+A F+ ++ + KLP V+H F GT + D L+
Sbjct: 110 FSAQLALAAECGMPVFLHCRDAHERFMALLTPWLDKLP-GAVLHCFTGTRDELQDCLRHG 168
Query: 311 -----------TKENL---ETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ L + + IP +RL++ETD P+ ++ P
Sbjct: 169 LYIGITGWVCDERRGLALRDMLPLIPANRLMVETDAPYLLPRDMTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
KP RNEPA + I+ +A RG + + L N LF
Sbjct: 215 ------KPG---SRRNEPAYLAHIMARIAHWRGEDAQWLSGETDNNVRTLF 256
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 5/50 (10%)
Query: 428 RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDR 477
R +ST G HP S + + E +++L + +VVA GE GLD++R
Sbjct: 54 RCWSTAGVHPHDSSRWTRETEQRIRTLAQ-----APEVVAIGECGLDFNR 98
>sp|D8MKW4|TATD_ERWBE Tat-linked quality control protein TatD OS=Erwinia billingiae
(strain Eb661) GN=tatD PE=3 SV=1
Length = 261
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA-Q 63
DIG NL + D D V+ RA +AG+ +++TGTN +S + LA +
Sbjct: 3 DIGVNLTSTQFAK-----------DRDQVVKRAKDAGITGLLITGTNALESQQAQSLATR 51
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP SE+ + L+ L + +VVA GE GLD++R P E
Sbjct: 52 RPGYCWSTAGVHPHHASEWSGETAATLKRLAE-----SPEVVAIGECGLDFNRNISEP-E 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q+ F QL+L+ +P+FLHCR+A F+ ++ + P LP V+H F GT +
Sbjct: 106 QQVYAFNAQLELAAELAMPVFLHCRDAHDRFLAVLTPWLPTLP-GAVVHCFTGTREELEA 164
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP DRLLLETD P+
Sbjct: 165 CLAAGLSIGITGWVCDERRGVELRELMPLIPADRLLLETDAPY 207
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 79/177 (44%), Gaps = 38/177 (21%)
Query: 245 NEPANIVY-FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPF 303
+EP VY F QL+L+ +P+FLHCR+A F+ ++ + P LP V+H F GT
Sbjct: 102 SEPEQQVYAFNAQLELAAELAMPVFLHCRDAHDRFLAVLTPWLPTLP-GAVVHCFTGTRE 160
Query: 304 Q----------------AVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYI 347
+ D + E E + IP DRLLLETD P+
Sbjct: 161 ELEACLAAGLSIGITGWVCDERRGVELRELMPLIPADRLLLETDAPY------------- 207
Query: 348 RTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+ +P + RNEP + I+++VA +RG E E LG N +LF
Sbjct: 208 ------LLPRDMRP-RPPSRRNEPCFLPHIVQVVAGLRGEEPEALGRQCDANARKLF 257
Score = 35.0 bits (79), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 430 YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDR 477
+ST G HP SE+ + L+ L + +VVA GE GLD++R
Sbjct: 57 WSTAGVHPHHASEWSGETAATLKRLAE-----SPEVVAIGECGLDFNR 99
>sp|C4VAS3|TATD1_NOSCE Putative deoxyribonuclease TATDN1 homolog OS=Nosema ceranae (strain
BRL01) GN=NCER_101798 PE=3 SV=1
Length = 259
Score = 107 bits (266), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/224 (31%), Positives = 116/224 (51%), Gaps = 39/224 (17%)
Query: 46 IVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKI-IKEGGKKV 104
I G + S+ S A+ + L+ G HP L S + + I +
Sbjct: 32 IFVGVDYTTSLKSCNYAEKFDTLFYA-GIHP-------------LYSENSVYIPVNSDRC 77
Query: 105 VAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPK 164
+A GE GLDY R+Q+ +ETQ + F+ QLDL FLHCR++ DF+EI+ +Y
Sbjct: 78 IAIGECGLDYYRLQFSSIETQKRIFKVQLDLKAER---YFLHCRDSHRDFMEILSDY--- 131
Query: 165 LPRKGVIHSFDGTP-----------FQAVD--SLKTKENLETVKSIPEDRLLLETDCPWC 211
KGV+HSF GT F ++ SLK +E +E VK++P + +L+ETD P+C
Sbjct: 132 -NFKGVVHSFTGTVEESKEIIKKGLFIGINGCSLKNEEGIEVVKNLPLNSILVETDSPYC 190
Query: 212 EVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKS----RNEPANIV 251
+++ S+AG+ ++ + E + +++++ +N P NI+
Sbjct: 191 KIRKSYAGYKFVNNYQKHKSNEPYLIYEIIEAIANIKNIPINIL 234
Score = 85.5 bits (210), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 69/273 (25%), Positives = 120/273 (43%), Gaps = 61/273 (22%)
Query: 145 LHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLL 204
L C+ AK I + +Y L FD + + L ++ ++ + DR +
Sbjct: 22 LKCKEAKVIPIFVGVDYTTSLKSCNYAEKFDTLFYAGIHPLYSENSVYI--PVNSDRCIA 79
Query: 205 ETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHK 264
+C G Y R Q ++ ++ F+ QLDL
Sbjct: 80 IGEC----------GLDYYRLQFSSIETQKR----------------IFKVQLDLKAER- 112
Query: 265 LPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP-----------FQAVD--SLKT 311
FLHCR++ DF+EI+ +Y KGV+HSF GT F ++ SLK
Sbjct: 113 --YFLHCRDSHRDFMEILSDY----NFKGVVHSFTGTVEESKEIIKKGLFIGINGCSLKN 166
Query: 312 KENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEP 371
+E +E VK++P + +L+ETD P+C+++ S+AG+ ++ ++K K NEP
Sbjct: 167 EEGIEVVKNLPLNSILVETDSPYCKIRKSYAGYKFV-NNYQKHKS------------NEP 213
Query: 372 ANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
I +I+E +A ++ + L + N + +
Sbjct: 214 YLIYEIIEAIANIKNIPINILLDTLLSNNINFY 246
>sp|D4GGR2|TATD_PANAM Tat-linked quality control protein TatD OS=Pantoea ananatis (strain
LMG 20103) GN=tatD PE=3 SV=2
Length = 260
Score = 105 bits (262), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 107/223 (47%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + D + V++RA AG+ +++TGTN +S + KLA++
Sbjct: 3 DIGVNLTSTQFAS-----------DREKVISRAREAGVTGMLITGTNALESQQAQKLAEA 51
Query: 65 -DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ +ST G HP SE+ D L+ L + K VVA GE GLD++R +
Sbjct: 52 HQDYCWSTAGVHPHHASEWSADVANTLRRLAE-----KKDVVAIGECGLDFNR-NLSAHQ 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F QL L+ +P+FLHCR A F +++ + PKLP VIH F GT +
Sbjct: 106 QQEYAFDAQLALAAELNMPVFLHCREAHERFAAVLEPWLPKLP-AAVIHCFTGTREELTA 164
Query: 184 SLKTKENL----------------ETVKSIPEDRLLLETDCPW 210
L ++ E + IP +RLLLETD P+
Sbjct: 165 CLDMGLSVGITGWVCDERRGIALREMLPLIPAERLLLETDAPY 207
Score = 63.9 bits (154), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK 312
F QL L+ +P+FLHCR A F +++ + PKLP VIH F GT + L
Sbjct: 111 FDAQLALAAELNMPVFLHCREAHERFAAVLEPWLPKLP-AAVIHCFTGTREELTACLDMG 169
Query: 313 ENL----------------ETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
++ E + IP +RLLLETD P+ +++P
Sbjct: 170 LSVGITGWVCDERRGIALREMLPLIPAERLLLETDAPYLLPRDMRP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+ RNEP + IL+ VA RG E L + N +LF
Sbjct: 216 ---------RPTSRRNEPCFLPHILQQVANWRGENVEMLARQVDHNARKLF 257
Score = 37.4 bits (85), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 5/48 (10%)
Query: 430 YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDR 477
+ST G HP SE+ D L+ L + K VVA GE GLD++R
Sbjct: 57 WSTAGVHPHHASEWSADVANTLRRLAE-----KKDVVAIGECGLDFNR 99
>sp|B7XJI2|TATD1_ENTBH Putative deoxyribonuclease TATDN1 homolog OS=Enterocytozoon
bieneusi (strain H348) GN=EBI_25826 PE=3 SV=1
Length = 274
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 70/194 (36%), Positives = 104/194 (53%), Gaps = 24/194 (12%)
Query: 46 IVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEF--ENDPEGYL----QSLDKIIKE 99
+ G ++E +I + L++ + L G HPT + EN+ L L ++ E
Sbjct: 37 LFIGLDMETNIQVIHLSKMQQTL-CYCGIHPTHINTLYKENNIWNILDIVQADLKQLFVE 95
Query: 100 GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMK 159
+ ++A GE GLDY R Q +E Q + F+ QL+LS + +P FLH RNA DF I+K
Sbjct: 96 NSEYIIAIGECGLDYYRNQ-LKIEQQ-RIFKMQLELSYLN-IPYFLHMRNAFDDFYNIIK 152
Query: 160 EYAPKLPRKGVIHSFDGTPFQA-----------VDSLKTKENLETVKSIPEDRLLLETDC 208
Y GVIHSFDGT QA ++ K N++ VK+IP D++L+ETD
Sbjct: 153 NYTN---VTGVIHSFDGTVDQALALINLGFYIGINGCSLKNNIDLVKNIPIDKILVETDS 209
Query: 209 PWCEVKPSHAGFAY 222
P+C ++ S+AG Y
Sbjct: 210 PFCLIRKSYAGAEY 223
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 61/166 (36%), Positives = 92/166 (55%), Gaps = 35/166 (21%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA------- 305
F+ QL+LS + +P FLH RNA DF I+K Y GVIHSFDGT QA
Sbjct: 123 FKMQLELSYLN-IPYFLHMRNAFDDFYNIIKNYTN---VTGVIHSFDGTVDQALALINLG 178
Query: 306 ----VDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKP 361
++ K N++ VK+IP D++L+ETD P+C ++ S+AG Y + KVK+
Sbjct: 179 FYIGINGCSLKNNIDLVKNIPIDKILVETDSPFCLIRKSYAGAEYGKVL--KVKE----- 231
Query: 362 DKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQ---NTLRLF 404
NEP I+ ++EI++ ++ + ++L IHQ NT++ F
Sbjct: 232 -------NEPVYILNLIEIISNIKQMPIQQL---IHQFKLNTIKCF 267
>sp|E8XYF5|TATD_RAHSY Tat-linked quality control protein TatD OS=Rahnella sp. (strain
Y9602) GN=tatD PE=3 SV=1
Length = 263
Score = 105 bits (262), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 123/263 (46%), Gaps = 44/263 (16%)
Query: 14 MYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA-QSDERLYSTV 72
M+E + + + + D V+ RA AGL +++TGT+ ++S+ + K+A + + +ST
Sbjct: 1 MFEIGINLTSSQFDKDRLQVVERARTAGLSGMLITGTSAQESVEAQKMADEHPDFCWSTA 60
Query: 73 GCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQ 132
G HP + S + E ++ L + VVA GE GLD++R + P + Q F Q
Sbjct: 61 GVHPHQASHWNAQVEAGIRELAVL-----PNVVAIGECGLDFNR-NFSPADRQEAAFTAQ 114
Query: 133 LDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ------------ 180
L L+ +LP+FLHCR+A F ++K + LP GV+H F GT +
Sbjct: 115 LALAKELQLPVFLHCRDAGERFATLLKPWLSDLP-GGVVHCFTGTRQELELYLSLGLSIG 173
Query: 181 ----AVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWK 236
D + E + + IP DRL+LETD P + R K K
Sbjct: 174 ITGWVCDERRGLELRDMLPLIPADRLMLETDAP----------YLLPRDMENKPKNR--- 220
Query: 237 PDKMVKSRNEPANIVYFRKQLDL 259
RNEPA + + KQ+ L
Sbjct: 221 -------RNEPAFLPHIVKQVAL 236
Score = 65.1 bits (157), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 72/168 (42%), Gaps = 37/168 (22%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F QL L+ +LP+FLHCR+A F ++K + LP GV+H F GT +
Sbjct: 111 FTAQLALAKELQLPVFLHCRDAGERFATLLKPWLSDLP-GGVVHCFTGTRQELELYLSLG 169
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
D + E + + IP DRL+LETD P + R K K
Sbjct: 170 LSIGITGWVCDERRGLELRDMLPLIPADRLMLETDAP----------YLLPRDMENKPKN 219
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
RNEPA + I++ VA RG + + L I N +LF
Sbjct: 220 R----------RNEPAFLPHIVKQVALWRGEDPQWLADITDDNARKLF 257
>sp|Q0SZ31|TATD_SHIF8 Tat-linked quality control protein TatD OS=Shigella flexneri
serotype 5b (strain 8401) GN=tatD PE=3 SV=1
Length = 260
Score = 104 bits (260), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 114/223 (51%), Gaps = 36/223 (16%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + + D D V+ RA++AG+ +++TGTN+ +S + KLA+
Sbjct: 3 DIGVNLTSSQFA-----------KDRDDVVARAFDAGVNGLLITGTNLRESQQAQKLARQ 51
Query: 65 DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGK-KVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S+++ E + II+ + +VVA GE GLD++R P E
Sbjct: 52 YSSCWSTAGVHPHDSSQWQAATE------EAIIELAAQPEVVAIGECGLDFNRNFSTP-E 104
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA 181
Q + F QL ++ +P+F+HCR+A F+ +++ + KLP V+H F GT QA
Sbjct: 105 EQERAFVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLP-GAVLHCFTGTREEMQA 163
Query: 182 --------------VDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP ++LL+ETD P+
Sbjct: 164 CVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPY 206
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA----- 305
F QL ++ +P+F+HCR+A F+ +++ + KLP V+H F GT QA
Sbjct: 110 FVAQLRIAAELNMPVFMHCRDAHERFMTLLEPWLDKLP-GAVLHCFTGTREEMQACVARG 168
Query: 306 ---------VDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP ++LL+ETD P+ ++ P
Sbjct: 169 IYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
KP RNEPA++ IL+ +A RG + L N LF
Sbjct: 215 ------KPS---SRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLF 256
>sp|E0SLH6|TATD_DICD3 Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
3937) GN=tatD PE=3 SV=1
Length = 264
Score = 104 bits (259), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 111/224 (49%), Gaps = 35/224 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDS-ISSLKLA 62
DIG NL + + D + V+ RA AG+ +++TGT+VE+S + L A
Sbjct: 2 FDIGVNLTSSQFRS-----------DREQVVARARQAGVTGLLLTGTSVEESEQACLLAA 50
Query: 63 QSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPV 122
Q + ST G HP S + +D + L G ++V+A GE GLD++R P
Sbjct: 51 QYPDYCGSTAGVHPHDASGWNDDTADLIHQL-----AGREQVLAIGECGLDFNRNFSTPQ 105
Query: 123 ETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAV 182
E Q + F QL ++ +P+FLHCR+A + F+ ++ + KLP V+H F G+ +
Sbjct: 106 E-QEQAFSAQLAIAAERAMPVFLHCRDAHARFMALLTPWLDKLP-AAVLHCFTGSGDELD 163
Query: 183 DSLKTKENL----------------ETVKSIPEDRLLLETDCPW 210
DSL+ + + IP+DRLLLETD P+
Sbjct: 164 DSLRAGLMIGITGWVCDERRGLALRALLPRIPDDRLLLETDAPY 207
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 77/172 (44%), Gaps = 37/172 (21%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK 312
F QL ++ +P+FLHCR+A + F+ ++ + KLP V+H F G+ + DSL+
Sbjct: 111 FSAQLAIAAERAMPVFLHCRDAHARFMALLTPWLDKLP-AAVLHCFTGSGDELDDSLRAG 169
Query: 313 ENL----------------ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
+ + IP+DRLLLETD P+ + H
Sbjct: 170 LMIGITGWVCDERRGLALRALLPRIPDDRLLLETDAPYLLPRDLHP-------------- 215
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408
K RNEP + I+ VAA RG + E LG + +N R+F P +
Sbjct: 216 ------KPASRRNEPCFLPHIVRQVAAWRGQDAEWLGRNVDENARRIFRPGQ 261
>sp|B7LTZ5|TATD_ESCF3 Tat-linked quality control protein TatD OS=Escherichia fergusonii
(strain ATCC 35469 / DSM 13698 / CDC 0568-73) GN=tatD
PE=3 SV=1
Length = 260
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 36/223 (16%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + + D D ++ RA+ AG+ +++TGTN+ +S + KLA+
Sbjct: 3 DIGVNLTSSQFA-----------KDRDDIVTRAFAAGVNGLLITGTNLRESQQAQKLARH 51
Query: 65 DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGK-KVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S+++ E + II+ + +VVA GE GLD++R P E
Sbjct: 52 YPHCWSTAGVHPHDSSQWQAATE------EAIIELAAQPEVVAIGECGLDFNRNFSTP-E 104
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA 181
Q + F QL ++ +P+F+HCR+A FI +++ + KLP V+H F GT QA
Sbjct: 105 EQERAFVAQLRIAAELNMPVFMHCRDAHERFITLLEPWLEKLP-GAVLHCFTGTREEMQA 163
Query: 182 --------------VDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP ++LL+ETD P+
Sbjct: 164 CVARGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPY 206
Score = 57.4 bits (137), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA----- 305
F QL ++ +P+F+HCR+A FI +++ + KLP V+H F GT QA
Sbjct: 110 FVAQLRIAAELNMPVFMHCRDAHERFITLLEPWLEKLP-GAVLHCFTGTREEMQACVARG 168
Query: 306 ---------VDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP ++LL+ETD P+ ++ P
Sbjct: 169 IYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEPA + IL+ +A RG + L N LF
Sbjct: 215 ---------KPTSRRNEPAYLPHILQRIAQWRGEDAACLAATTDTNVKTLF 256
>sp|Q9L6M2|TATD_SALTY Tat-linked quality control protein TatD OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=tatD PE=3 SV=1
Length = 260
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 112/223 (50%), Gaps = 36/223 (16%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + + D D V+ RA+ AG++ +++TGTN+ +S +LKLA+
Sbjct: 3 DIGVNLTSSQFAK-----------DRDDVVARAFAAGVKGMLLTGTNIHESQQALKLARR 51
Query: 65 DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGK-KVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S++ E D II + +VVA GE GLD++R P E
Sbjct: 52 YPHCWSTAGVHPHDSSQWSPASE------DAIIALANQPEVVAIGECGLDFNRNFSTPQE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q + F+ QL ++ ++P+F+HCR+A F+ ++ + LP ++H F G+ Q
Sbjct: 106 -QERAFQAQLQIAAELQIPIFMHCRDAHERFLVLLDPWLDSLP-GAILHCFTGSRQQMQA 163
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP ++LL+ETD P+
Sbjct: 164 CVDRGLYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPY 206
Score = 57.8 bits (138), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 72/171 (42%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F+ QL ++ ++P+F+HCR+A F+ ++ + LP ++H F G+ Q
Sbjct: 110 FQAQLQIAAELQIPIFMHCRDAHERFLVLLDPWLDSLP-GAILHCFTGSRQQMQACVDRG 168
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP ++LL+ETD P+ ++ P
Sbjct: 169 LYIGITGWVCDERRGLELRELLPFIPAEKLLIETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEPA + ILE +A RG + + L + N LF
Sbjct: 215 ---------KPTSRRNEPAYLPHILERIALWRGEDPQWLAAMTDANARTLF 256
>sp|D0Z9R0|TATD_EDWTE Tat-linked quality control protein TatD OS=Edwardsiella tarda
(strain EIB202) GN=tatD PE=3 SV=1
Length = 260
Score = 103 bits (257), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/224 (32%), Positives = 106/224 (47%), Gaps = 35/224 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
+DIG NL + + G D+ V+ RA AGL +I+TGTN+ +S +L LAQ
Sbjct: 2 LDIGVNLTNGQFSG-----------DVPQVVARARQAGLNGMIITGTNLTESAQALHLAQ 50
Query: 64 S-DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPV 122
+ + ++T G HP + + L+ L + VVA GE GLD+ R P
Sbjct: 51 AYPDFCWATAGVHPHDAHRWNENSAADLEPLLR-----SPAVVAVGECGLDFARNFSTPA 105
Query: 123 ETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQ 180
+ Q F QL L+ P+FLHCR A + FI +++ + +LP V+H F GT
Sbjct: 106 Q-QEAAFEAQLALAAQIGKPVFLHCREAHARFIALLRPWLSRLP-GAVLHCFTGTRDELD 163
Query: 181 AVDSLKTKENL--------------ETVKSIPEDRLLLETDCPW 210
A SL + + IP +RLLLETD P+
Sbjct: 164 ACLSLGLYIGITGWICDERRGMPLRALLPHIPAERLLLETDAPY 207
Score = 51.2 bits (121), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 68/171 (39%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQAVDSLK 310
F QL L+ P+FLHCR A + FI +++ + +LP V+H F GT A SL
Sbjct: 111 FEAQLALAAQIGKPVFLHCREAHARFIALLRPWLSRLP-GAVLHCFTGTRDELDACLSLG 169
Query: 311 TKENL--------------ETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ + IP +RLLLETD P+ +++P
Sbjct: 170 LYIGITGWICDERRGMPLRALLPHIPAERLLLETDAPYLLPRDIQP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
KP RNEP + I E A R + L + N +LF
Sbjct: 216 ------KPK---SRRNEPCFLPHIAEQAARWRQQDANWLKQVTENNARQLF 257
>sp|C6DI71|TATD_PECCP Tat-linked quality control protein TatD OS=Pectobacterium
carotovorum subsp. carotovorum (strain PC1) GN=tatD PE=3
SV=1
Length = 260
Score = 102 bits (255), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + +E D + V+ RA AG+ I++TGTN ++S ++ LAQ+
Sbjct: 3 DIGVNLTSSQFE-----------KDREQVVIRAKQAGVSGILITGTNAQESQQAMLLAQA 51
Query: 65 -DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ +ST G HP S++ + + + VVA GE GLD++R P E
Sbjct: 52 YPDYCWSTAGVHPHDASQWNDAVAEQIHHM-----ASADCVVAIGECGLDFNRNFSTP-E 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q + F QL ++ +P+FLHCR+A S FI + + +LP V+H F G + +
Sbjct: 106 EQERAFSAQLAIAAERSMPVFLHCRDAHSRFISFLTPWLNRLP-AAVVHCFTGNRHELDE 164
Query: 184 SLKT-------------KENLE---TVKSIPEDRLLLETDCPW 210
L + LE + IP DRLL+ETD P+
Sbjct: 165 CLAAGLMVGITGWVCDERRGLELRALLPHIPADRLLVETDAPY 207
Score = 62.8 bits (151), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT- 311
F QL ++ +P+FLHCR+A S FI + + +LP V+H F G + + L
Sbjct: 111 FSAQLAIAAERSMPVFLHCRDAHSRFISFLTPWLNRLP-AAVVHCFTGNRHELDECLAAG 169
Query: 312 ------------KENLE---TVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ LE + IP DRLL+ETD P+ +++P
Sbjct: 170 LMVGITGWVCDERRGLELRALLPHIPADRLLVETDAPYLLPRDLRP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I+ +A RG + LG +N R+F
Sbjct: 216 ---------KPASRRNEPCYLPHIIRQIAEWRGEDATWLGQTTDENARRVF 257
>sp|E1SKR8|TATD_PANVC Tat-linked quality control protein TatD OS=Pantoea vagans (strain
C9-1) GN=tatD PE=3 SV=1
Length = 260
Score = 102 bits (254), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 75/225 (33%), Positives = 108/225 (48%), Gaps = 35/225 (15%)
Query: 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA 62
DIG NL + +S QK V+ RA +AG+ +++TGTN +S + +LA
Sbjct: 1 MFDIGVNLTSTQF----ASDRQK-------VVKRARDAGVTGMLITGTNALESQHAQRLA 49
Query: 63 QSDERL-YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCP 121
++ +ST G HP SE+ + L+ L + +VVA GE GLD++R
Sbjct: 50 EAQPGFCWSTAGVHPHHASEWSTEIASTLRRLAE-----KPEVVAIGECGLDFNR-NLSA 103
Query: 122 VETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ- 180
E Q F QL L+ +P+FLHCR A + F +++ + PKL VIH F GT +
Sbjct: 104 HEQQEYAFDAQLALAAELNMPVFLHCREAHARFAAVLEPWLPKLA-GAVIHCFTGTRDEL 162
Query: 181 ---------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP DRLLLETD P+
Sbjct: 163 EACLAMGLSVGITGWVCDERRGLELRELLPLIPADRLLLETDAPY 207
Score = 65.9 bits (159), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F QL L+ +P+FLHCR A + F +++ + PKL VIH F GT +
Sbjct: 111 FDAQLALAAELNMPVFLHCREAHARFAAVLEPWLPKLA-GAVIHCFTGTRDELEACLAMG 169
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP DRLLLETD P+ +++P
Sbjct: 170 LSVGITGWVCDERRGLELRELLPLIPADRLLLETDAPYLLPRDMRP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+ RNEP + I+ VA RG E+L I QN LF
Sbjct: 216 ---------RPTSRRNEPCFLPHIVNQVATWRGESAEELATRIDQNARTLF 257
>sp|C6C4V4|TATD_DICDC Tat-linked quality control protein TatD OS=Dickeya dadantii (strain
Ech703) GN=tatD PE=3 SV=1
Length = 264
Score = 102 bits (254), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ- 63
DIG NL + +E D D V++RA G+ +++TGT +E+S +L+LA+
Sbjct: 3 DIGVNLTSSQFES-----------DRDAVISRARREGVTGMLLTGTGIEESRHALRLAEG 51
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ +ST G HP S + + ++ L +VVA GE GLD++R P E
Sbjct: 52 APGYCWSTAGIHPHEASTWTDAAALSIRQLAV-----HPQVVAIGECGLDFNRNFSTPSE 106
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q + F QL ++ +P+F+HCR A S F+ +++ + KLP V+H F GT + +
Sbjct: 107 -QERAFSAQLAIAADLGMPVFMHCREAHSRFMMLLRPWLEKLP-AAVLHCFTGTRDELDE 164
Query: 184 SLKTKENL----------------ETVKSIPEDRLLLETDCPW 210
L+ ++ ++ IP+DRLLLETD P+
Sbjct: 165 CLQAGLSIGITGWVCDERRGLALRALLEYIPDDRLLLETDAPY 207
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 74/168 (44%), Gaps = 37/168 (22%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK 312
F QL ++ +P+F+HCR A S F+ +++ + KLP V+H F GT + + L+
Sbjct: 111 FSAQLAIAADLGMPVFMHCREAHSRFMMLLRPWLEKLP-AAVLHCFTGTRDELDECLQAG 169
Query: 313 ENL----------------ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
++ ++ IP+DRLLLETD P+ + H
Sbjct: 170 LSIGITGWVCDERRGLALRALLEYIPDDRLLLETDAPYLLPRDLHP-------------- 215
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I+ VAA R + LG ++ N R+F
Sbjct: 216 ------KPTSRRNEPCFLPHIVRQVAAWRKQDAVALGRVVDDNARRIF 257
>sp|D2TUZ4|TATD_CITRI Tat-linked quality control protein TatD OS=Citrobacter rodentium
(strain ICC168) GN=tatD PE=3 SV=1
Length = 263
Score = 102 bits (253), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/223 (30%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + + D D V+ RA+ AG+ +++TGTN+ +S + +LAQ
Sbjct: 2 FDIGVNLTSSQFV-----------KDHDEVVARAYAAGVNGLLLTGTNLYESQQAQRLAQ 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP SE+ D + +L + +VVA GE GLD++R P +
Sbjct: 51 HYPHCWSTAGVHPHDSSEWRADTGEAIVALAAL-----PEVVAIGECGLDFNRNFSTP-Q 104
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F QL ++ ++P+F+HCR+A + F+ ++ + KLP V+H F GT + +
Sbjct: 105 AQEHAFEAQLRIAAELQMPVFMHCRDAHTRFLALLDPWLDKLP-GAVLHCFTGTRQEMQE 163
Query: 184 SLKTKENL----------------ETVKSIPEDRLLLETDCPW 210
L+ + E + IP ++LL+ETD P+
Sbjct: 164 CLERGLYIGITGWVCDERRGLALRELLPLIPTEKLLIETDAPY 206
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 75/171 (43%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK 312
F QL ++ ++P+F+HCR+A + F+ ++ + KLP V+H F GT + + L+
Sbjct: 110 FEAQLRIAAELQMPVFMHCRDAHTRFLALLDPWLDKLP-GAVLHCFTGTRQEMQECLERG 168
Query: 313 ENL----------------ETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ E + IP ++LL+ETD P+ ++ P
Sbjct: 169 LYIGITGWVCDERRGLALRELLPLIPTEKLLIETDAPYLLPRDLSP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEPA + IL+ +A RG + ++L N +LF
Sbjct: 215 ---------KPASRRNEPAYLPHILQRIAHWRGEDPQQLAAATDANAEKLF 256
>sp|E6WHK1|TATD_PANSA Tat-linked quality control protein TatD OS=Pantoea sp. (strain
At-9b) GN=tatD PE=3 SV=1
Length = 260
Score = 101 bits (252), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 105/224 (46%), Gaps = 35/224 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + D + V+ RA +AG+ +++TGTN +S + +LA+
Sbjct: 2 FDIGVNLTSTQFA-----------KDREQVVARARDAGVTGLLITGTNALESQQAQRLAE 50
Query: 64 SDER-LYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPV 122
+ST G HP S + + L+ L + ++VVA GE GLD++R +
Sbjct: 51 WHPGYCWSTAGVHPHHASAWSAETANTLRRLAE-----SEQVVAIGECGLDFNR-NFSAH 104
Query: 123 ETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-- 180
+ Q F QL L+ +LP+FLHCR A F I++ + PKL V H F GT +
Sbjct: 105 DQQEYAFDAQLQLAAELQLPVFLHCREAHDRFAAILQPWLPKLV-GAVAHCFTGTREELE 163
Query: 181 --------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP +RLLLETD PW
Sbjct: 164 ACLAMGLSIGITGWVCDERRGMELRELLPLIPAERLLLETDAPW 207
Score = 67.0 bits (162), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 68/168 (40%), Gaps = 37/168 (22%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F QL L+ +LP+FLHCR A F I++ + PKL V H F GT +
Sbjct: 111 FDAQLQLAAELQLPVFLHCREAHDRFAAILQPWLPKLV-GAVAHCFTGTREELEACLAMG 169
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
D + E E + IP +RLLLETD PW + H
Sbjct: 170 LSIGITGWVCDERRGMELRELLPLIPAERLLLETDAPWLLPRDMH--------------- 214
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+ RNEP + I++ VA R E LG + N +LF
Sbjct: 215 -----PRPTSRRNEPCFLPHIVQQVALWRNEAAETLGAQVDHNARQLF 257
>sp|D0KC77|TATD_PECWW Tat-linked quality control protein TatD OS=Pectobacterium wasabiae
(strain WPP163) GN=tatD PE=3 SV=1
Length = 260
Score = 101 bits (251), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 106/223 (47%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + +E D + V+ RA AG+ I++TGTN ++S ++ LAQ+
Sbjct: 3 DIGVNLTSSQFE-----------QDREQVVIRAKQAGVSGILITGTNAQESHQAMLLAQA 51
Query: 65 -DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ +ST G HP S++ D + + VVA GE GLD++R P E
Sbjct: 52 YPDYCWSTAGVHPHDASQWNGDIAEQVHHM-----ANAACVVAIGECGLDFNRNFSTP-E 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q + F QL ++ +P+FLHCR+A FI ++ + +LP V+H F G +
Sbjct: 106 EQERAFSAQLAIAAELSMPVFLHCRDAHPRFISLLTPWLGQLP-AAVVHCFTGNRQELDA 164
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E + IP DRLL+ETD P+
Sbjct: 165 CLAVGLTIGITGWVCDERRGLELRALLPHIPADRLLVETDAPY 207
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 70/171 (40%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F QL ++ +P+FLHCR+A FI ++ + +LP V+H F G +
Sbjct: 111 FSAQLAIAAELSMPVFLHCRDAHPRFISLLTPWLGQLP-AAVVHCFTGNRQELDACLAVG 169
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E + IP DRLL+ETD P+ +++P
Sbjct: 170 LTIGITGWVCDERRGLELRALLPHIPADRLLVETDAPYLLPRDLRP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I+ +A RG + LG I +N R+F
Sbjct: 216 ---------KPASRRNEPCYLPHIIRQIAEWRGEDATWLGQITDENARRIF 257
>sp|P27859|TATD_ECOLI Tat-linked quality control protein TatD OS=Escherichia coli (strain
K12) GN=tatD PE=1 SV=3
Length = 260
Score = 100 bits (250), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 113/223 (50%), Gaps = 36/223 (16%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + + D D V+ A++AG+ +++TGTN+ +S + KLA+
Sbjct: 3 DIGVNLTSSQFA-----------KDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQ 51
Query: 65 DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGK-KVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S+++ E + II+ + +VVA GE GLD++R P E
Sbjct: 52 YSSCWSTAGVHPHDSSQWQAATE------EAIIELAAQPEVVAIGECGLDFNRNFSTP-E 104
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA 181
Q + F QL ++ +P+F+HCR+A F+ +++ + KLP V+H F GT QA
Sbjct: 105 EQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLP-GAVLHCFTGTREEMQA 163
Query: 182 --------------VDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + IP ++LL+ETD P+
Sbjct: 164 CVAHGIYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPY 206
Score = 57.0 bits (136), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 73/171 (42%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT--PFQA----- 305
F QL ++ +P+F+HCR+A F+ +++ + KLP V+H F GT QA
Sbjct: 110 FVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDKLP-GAVLHCFTGTREEMQACVAHG 168
Query: 306 ---------VDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E E + IP ++LL+ETD P+ ++ P
Sbjct: 169 IYIGITGWVCDERRGLELRELLPLIPAEKLLIETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
KP RNEPA++ IL+ +A RG + L N LF
Sbjct: 215 ------KPS---SRRNEPAHLPHILQRIAHWRGEDAAWLAATTDANVKTLF 256
>sp|Q6DAQ1|TATD_ERWCT Tat-linked quality control protein TatD OS=Erwinia carotovora
subsp. atroseptica (strain SCRI 1043 / ATCC BAA-672)
GN=tatD PE=3 SV=1
Length = 260
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/223 (31%), Positives = 108/223 (48%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS 64
DIG NL + +E D + V+ RA AG+ I++TGTN ++S ++ LAQ+
Sbjct: 3 DIGVNLTSSQFE-----------KDREQVVIRAKLAGVSGILITGTNAQESHQAMLLAQA 51
Query: 65 -DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ +ST G HP S++ + L + VV+ GE GLD++R P E
Sbjct: 52 YPDYCWSTAGVHPHDASQWNDAIAEQLHQM-----ANAACVVSIGECGLDFNRNFSTP-E 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q + F QL ++ +P+FLHCR+A FI ++ + +LP V+H F G + +
Sbjct: 106 EQEQAFSAQLAIAAELSMPVFLHCRDAHPRFISLLTPWLSQLP-AAVVHCFTGNRHELDE 164
Query: 184 SLKT-------------KENLE---TVKSIPEDRLLLETDCPW 210
L + LE + IP DRLL+ETD P+
Sbjct: 165 CLAAGLMIGITGWVCDERRGLELRALLPHIPADRLLVETDAPY 207
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT- 311
F QL ++ +P+FLHCR+A FI ++ + +LP V+H F G + + L
Sbjct: 111 FSAQLAIAAELSMPVFLHCRDAHPRFISLLTPWLSQLP-AAVVHCFTGNRHELDECLAAG 169
Query: 312 ------------KENLE---TVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ LE + IP DRLL+ETD P+ +++P
Sbjct: 170 LMIGITGWVCDERRGLELRALLPHIPADRLLVETDAPYLLPRDLRP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I+ +A RG + LG +N R+F
Sbjct: 216 ---------KPASRRNEPCYLPHIIRQIAEWRGEDATWLGQTTDENARRVF 257
>sp|A8G8C4|TATD_SERP5 Tat-linked quality control protein TatD OS=Serratia proteamaculans
(strain 568) GN=tatD PE=3 SV=1
Length = 260
Score = 98.6 bits (244), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 37/226 (16%)
Query: 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA 62
DIG NL SS+ K P V+ RA AG+ +++TGT++++S ++ +LA
Sbjct: 1 MFDIGVNLT--------SSQFAKDRP---AVVERARAAGVTGLLITGTDLQESRAASELA 49
Query: 63 QSDERL-YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGK-KVVAFGEFGLDYDRVQYC 120
Q +ST G HP S ++ + ++I + + +V A GE GLD++R
Sbjct: 50 QQHANFCWSTAGVHPHHASSWDE------RVAEQICELAARPRVAAIGECGLDFNRNFST 103
Query: 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ 180
P E Q F QL L+ +P+FLHCR+A + F ++ + KLP V+H F GT +
Sbjct: 104 P-EQQEAAFSAQLALAAELSMPVFLHCRDAHARFAALLAPWLDKLP-AAVVHCFTGTAEE 161
Query: 181 ----------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E + IP DRLLLETD P+
Sbjct: 162 LESCLSLGLSVGITGWVCDERRGLELRALLPQIPADRLLLETDAPY 207
Score = 64.7 bits (156), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 43/171 (25%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ-------- 304
F QL L+ +P+FLHCR+A + F ++ + KLP V+H F GT +
Sbjct: 111 FSAQLALAAELSMPVFLHCRDAHARFAALLAPWLDKLP-AAVVHCFTGTAEELESCLSLG 169
Query: 305 --------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
D + E + IP DRLLLETD P+ ++ P
Sbjct: 170 LSVGITGWVCDERRGLELRALLPQIPADRLLLETDAPYLLPRDLLP-------------- 215
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I+ VAA R + E LG I +N RLF
Sbjct: 216 ---------KPTSRRNEPCFLPHIVRQVAAWRQEDPEWLGQKIDENARRLF 257
>sp|P37545|YABD_BACSU Uncharacterized deoxyribonuclease YabD OS=Bacillus subtilis (strain
168) GN=yabD PE=3 SV=1
Length = 255
Score = 97.8 bits (242), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 22/207 (10%)
Query: 24 QKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFE 83
++++ D++ V+ RA +E+I+V G + ++++ + + +Y+ +G HP +
Sbjct: 12 EQYDTDLEEVIERAKAEKVERIVVVGFDRPTITRAMEMIEEYDFIYAAIGWHPVDAIDMT 71
Query: 84 NDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPL 143
+ +++ L +KVVA GE GLDY P + Q + FR Q+ L+ LP+
Sbjct: 72 EEDLAWIKELS-----AHEKVVAIGEMGLDY-HWDKSPKDIQKEVFRNQIALAKEVNLPI 125
Query: 144 FLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK---------------TK 188
+H R+A D + I+KE + G++H F G+ A + +K K
Sbjct: 126 IIHNRDATEDVVTILKEEGAE-AVGGIMHCFTGSAEVARECMKMNFYLSFGGPVTFKNAK 184
Query: 189 ENLETVKSIPEDRLLLETDCPWCEVKP 215
+ E VK IP DRLL+ETDCP+ P
Sbjct: 185 KPKEVVKEIPNDRLLIETDCPFLTPHP 211
Score = 66.2 bits (160), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 73/167 (43%), Gaps = 40/167 (23%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK-- 310
FR Q+ L+ LP+ +H R+A D + I+KE + G++H F G+ A + +K
Sbjct: 111 FRNQIALAKEVNLPIIIHNRDATEDVVTILKEEGAE-AVGGIMHCFTGSAEVARECMKMN 169
Query: 311 -------------TKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKE 357
K+ E VK IP DRLL+ETDCP+ P
Sbjct: 170 FYLSFGGPVTFKNAKKPKEVVKEIPNDRLLIETDCPFLTPHPFRG--------------- 214
Query: 358 QWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
RNEP+ + + E +A ++ + E++ I +N RLF
Sbjct: 215 ---------KRNEPSYVKYVAEQIAELKEMTFEEIASITTENAKRLF 252
Score = 34.7 bits (78), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 9/66 (13%)
Query: 410 PTPTRFNTCVSFAPYEIERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFG 469
PT TR + E + +Y+ +G HP + + +++ L +KVVA G
Sbjct: 41 PTITRAMEMIE----EYDFIYAAIGWHPVDAIDMTEEDLAWIKELS-----AHEKVVAIG 91
Query: 470 EFGLDY 475
E GLDY
Sbjct: 92 EMGLDY 97
>sp|C9XTA5|TATD_CROTZ Tat-linked quality control protein TatD OS=Cronobacter turicensis
(strain DSM 18703 / LMG 23827 / z3032) GN=tatD PE=3 SV=2
Length = 263
Score = 97.4 bits (241), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 34/223 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG N+ + ++ D D ++ RA AG++ ++ TGT++E+S + A+
Sbjct: 2 FDIGLNITSSQFDH-----------DRDEMIARARAAGVDSMLFTGTSLEESDRACAFAR 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S + ++ L++L +VVA GE GLD++R P E
Sbjct: 51 RYAGCWSTAGVHPHDASTWNDESAARLRAL-----ASEPEVVAIGECGLDFNRNFSTPAE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVD 183
Q F +QL L+ LP+FLHCR+A + F+ ++ + KLP V+H F GT +A +
Sbjct: 106 -QEHAFTEQLRLAAALALPVFLHCRDAHARFLALLDPWLDKLP-GAVLHCFTGTEQEARE 163
Query: 184 SLKT-------------KENLE---TVKSIPEDRLLLETDCPW 210
L + LE + IP DRLLLETD P+
Sbjct: 164 CLARGMYLGITGWVCDERRGLELRALLPIIPADRLLLETDAPY 206
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 74/178 (41%), Gaps = 43/178 (24%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT- 311
F +QL L+ LP+FLHCR+A + F+ ++ + KLP V+H F GT +A + L
Sbjct: 110 FTEQLRLAAALALPVFLHCRDAHARFLALLDPWLDKLP-GAVLHCFTGTEQEARECLARG 168
Query: 312 ------------KENLE---TVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEK 353
+ LE + IP DRLLLETD P+ ++ P
Sbjct: 169 MYLGITGWVCDERRGLELRALLPIIPADRLLLETDAPYLLPRDLTP-------------- 214
Query: 354 VKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHELPT 411
K RNEP + IL VA RG + L N RLF + P
Sbjct: 215 ---------KPASRRNEPCWLPHILTQVAQWRGEDPAWLEAATDANAARLFLKNASPA 263
>sp|B1JP69|TATD_YERPY Tat-linked quality control protein TatD OS=Yersinia
pseudotuberculosis serotype O:3 (strain YPIII) GN=tatD
PE=3 SV=1
Length = 260
Score = 95.5 bits (236), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 35/223 (15%)
Query: 5 DIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLA-Q 63
DIG NL + D V+NRA AG+ I++TGT+ ++S+++ LA +
Sbjct: 3 DIGVNLTSVQFA-----------KDYHQVVNRAKEAGVLGILITGTDADESLAAQTLAAE 51
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S +++ E +++L VVA GE GLD++R P +
Sbjct: 52 YPGYCWSTTGVHPHHASSWQDSVEQKIRTL-----AATASVVAIGECGLDFNRNFSTPAQ 106
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
++ F QL L+ LP+FLHCR+A FI+++ + K+P V+H F G +
Sbjct: 107 QEVA-FTAQLALAAELSLPVFLHCRDAHERFIDLLVPWLDKIP-AAVVHCFTGNSDELDA 164
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + + + IP +LLLETD P+
Sbjct: 165 CLALGLSIGITGWVCDERRGLDLRALLPRIPVQQLLLETDAPY 207
Score = 55.1 bits (131), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/173 (27%), Positives = 70/173 (40%), Gaps = 43/173 (24%)
Query: 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ------ 304
V F QL L+ LP+FLHCR+A FI+++ + K+P V+H F G +
Sbjct: 109 VAFTAQLALAAELSLPVFLHCRDAHERFIDLLVPWLDKIP-AAVVHCFTGNSDELDACLA 167
Query: 305 ----------AVDSLKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQH 351
D + + + IP +LLLETD P+ ++ P
Sbjct: 168 LGLSIGITGWVCDERRGLDLRALLPRIPVQQLLLETDAPYLLPRDLNP------------ 215
Query: 352 EKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
K RNEP + I++ VAA R + LG +N R+F
Sbjct: 216 -----------KPASRRNEPCFLPHIVQQVAAWRQEDPNWLGQKTDENARRVF 257
Score = 35.0 bits (79), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 5/58 (8%)
Query: 430 YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQL 487
+ST G HP S +++ E +++L VVA GE GLD++R P + ++
Sbjct: 57 WSTTGVHPHHASSWQDSVEQKIRTL-----AATASVVAIGECGLDFNRNFSTPAQQEV 109
>sp|B5XYH5|TATD_KLEP3 Tat-linked quality control protein TatD OS=Klebsiella pneumoniae
(strain 342) GN=tatD PE=3 SV=1
Length = 263
Score = 92.0 bits (227), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 69/223 (30%), Positives = 108/223 (48%), Gaps = 34/223 (15%)
Query: 4 IDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQ 63
DIG NL + + D D V+ RA AG+ +++TGTN+ +S + ++A
Sbjct: 2 FDIGVNLTSSQFS-----------RDHDEVVARARAAGVHGMLLTGTNLPESQQAQRMAS 50
Query: 64 SDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVE 123
+ST G HP S + +++ + +E +VVA GE GLD++R P E
Sbjct: 51 HYSGCWSTAGVHPHDGSSWS---PAVAEAIYTLARE--PQVVAIGECGLDFNRNFSTPQE 105
Query: 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ--- 180
Q F QL L+ +P+FLHCR+A F+ ++K + K+P V+H F G+ +
Sbjct: 106 -QEAAFSAQLALAAELAMPVFLHCRDAHDRFLALLKPWLEKIP-GAVLHCFTGSRSEVQE 163
Query: 181 -------------AVDSLKTKENLETVKSIPEDRLLLETDCPW 210
D + E E + +IP +RLLLETD P+
Sbjct: 164 CLDLGLFIGITGWVCDERRGLELRELLPAIPAERLLLETDAPY 206
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 68/159 (42%), Gaps = 43/159 (27%)
Query: 265 LPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ----------------AVDS 308
+P+FLHCR+A F+ ++K + K+P V+H F G+ + D
Sbjct: 122 MPVFLHCRDAHDRFLALLKPWLEKIP-GAVLHCFTGSRSEVQECLDLGLFIGITGWVCDE 180
Query: 309 LKTKENLETVKSIPEDRLLLETDCPWC---EVKPSHAGFAYIRTQHEKVKKEQWKPDKMV 365
+ E E + +IP +RLLLETD P+ ++KP A
Sbjct: 181 RRGLELRELLPAIPAERLLLETDAPYLLPRDLKPRPA----------------------- 217
Query: 366 KSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
RNEPA + IL VA+ RG E + L N LF
Sbjct: 218 SRRNEPAYLPHILASVASWRGEETQWLEAQTDANVRTLF 256
>sp|Q8K9J1|Y343_BUCAP Uncharacterized deoxyribonuclease BUsg_343 OS=Buchnera aphidicola
subsp. Schizaphis graminum (strain Sg) GN=BUsg_343 PE=3
SV=1
Length = 264
Score = 84.3 bits (207), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 107/201 (53%), Gaps = 31/201 (15%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS-EFENDPE 87
+I+ +LN+A+ ++K + T++++ + KL + + ++ + G HP C E E E
Sbjct: 26 EIEKILNKAYENHVKKFLTVSTSIQNFYKTKKLLSTYDSIFYSCGIHPLYCQKEIECLNE 85
Query: 88 GYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVET---QLKYFRKQLDLSVTHKLPLF 144
S DK V+A GE GLDY Y ET Q K+FR+ + +++T P+
Sbjct: 86 LKKLSYDKC-------VIALGETGLDY----YYSFETKNLQEKFFREHIRIAITLNKPII 134
Query: 145 LHCRNAKSDFIEIMKEYAPKLPRKGVIHSF---DGTPFQAVDS---------LKTKENLE 192
+H RNA D I+I+KE + G++HSF + + F+ +D + K+++E
Sbjct: 135 IHSRNAIKDTIKILKEENAE-KCGGILHSFTESEKSAFELLDMGFYISFSGIITFKKSIE 193
Query: 193 ---TVKSIPEDRLLLETDCPW 210
T+K IP ++LL+ETD P+
Sbjct: 194 LCNTLKKIPLEKLLIETDSPY 214
Score = 56.2 bits (134), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 79/168 (47%), Gaps = 40/168 (23%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSF---DGTPFQAVDS 308
+FR+ + +++T P+ +H RNA D I+I+KE + G++HSF + + F+ +D
Sbjct: 118 FFREHIRIAITLNKPIIIHSRNAIKDTIKILKEENAE-KCGGILHSFTESEKSAFELLDM 176
Query: 309 ---------LKTKENLE---TVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
+ K+++E T+K IP ++LL+ETD P+ P
Sbjct: 177 GFYISFSGIITFKKSIELCNTLKKIPLEKLLIETDSPYLAPIPYRG-------------- 222
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
+N+PA ++ I + +A ++ + ++L I N LF
Sbjct: 223 ----------KKNQPAYLLDIAKKIALIKEISLKELAKITTNNFFTLF 260
>sp|P73335|Y1786_SYNY3 Uncharacterized deoxyribonuclease sll1786 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll1786 PE=3 SV=1
Length = 261
Score = 84.0 bits (206), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 98/203 (48%), Gaps = 22/203 (10%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
D+D + +R AG+ +++ + ++ LA L+ VG HP +++++ G
Sbjct: 18 DLDQLQHRWRQAGVVQLVHSCVKPQEFDQIQSLADRFPELFFAVGLHPLDAEDWQDNTAG 77
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR 148
+ + K +VVA GE GLD+ + + Q++ FR QL ++ P+ +HCR
Sbjct: 78 QILAYAK----ADDRVVAIGEMGLDFFKADN--RDHQIEVFRAQLAIARELNKPVIIHCR 131
Query: 149 NAKSDFIEIMKEY-APKLPRKGVIHSFDGTP--------------FQAVDSLKTKENLE- 192
+A +++ ++ A P GV+H + GTP F + K E ++
Sbjct: 132 DAAQTMRQVLTDFQAESGPVAGVMHCWGGTPEETQWFLDLGFYISFSGTVTFKKAEGIQA 191
Query: 193 TVKSIPEDRLLLETDCPWCEVKP 215
+ + +P DRLL+ETDCP+ P
Sbjct: 192 SAQMVPPDRLLVETDCPFLAPVP 214
Score = 70.5 bits (171), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 78/188 (41%), Gaps = 43/188 (22%)
Query: 242 KSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY-APKLPRKGVIHSFDG 300
K+ N I FR QL ++ P+ +HCR+A +++ ++ A P GV+H + G
Sbjct: 101 KADNRDHQIEVFRAQLAIARELNKPVIIHCRDAAQTMRQVLTDFQAESGPVAGVMHCWGG 160
Query: 301 TP--------------FQAVDSLKTKENLE-TVKSIPEDRLLLETDCPWCEVKPSHAGFA 345
TP F + K E ++ + + +P DRLL+ETDCP+ P
Sbjct: 161 TPEETQWFLDLGFYISFSGTVTFKKAEGIQASAQMVPPDRLLVETDCPFLAPVPQRG--- 217
Query: 346 YIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405
RNEPA + + E +AA+R V E L N LF
Sbjct: 218 ---------------------KRNEPAFVRHVAEAIAALRHVPLETLAQQTTTNARNLF- 255
Query: 406 PHELPTPT 413
+LP P
Sbjct: 256 --KLPVPA 261
Score = 34.3 bits (77), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 407 HELPTPTRFNTCVSFAPYEIERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVV 466
H P F+ S A L+ VG HP +++++ G + + K +VV
Sbjct: 36 HSCVKPQEFDQIQSLAD-RFPELFFAVGLHPLDAEDWQDNTAGQILAYAK----ADDRVV 90
Query: 467 AFGEFGLDY 475
A GE GLD+
Sbjct: 91 AIGEMGLDF 99
>sp|P39408|YJJV_ECOLI Uncharacterized deoxyribonuclease YjjV OS=Escherichia coli (strain
K12) GN=yjjV PE=1 SV=2
Length = 259
Score = 83.2 bits (204), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 63/198 (31%), Positives = 91/198 (45%), Gaps = 25/198 (12%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
D + L RA AG+ KIIV T E+ L LA++ + LY+ +G HP E +
Sbjct: 20 DEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHP---GMLEKHSDV 76
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDY--DRVQYCPVETQLKYFRKQLDLSVTHKLPLFLH 146
L+ L + ++ KVVA GE GLD D Q+ E Q +QL L+ + LP+ LH
Sbjct: 77 SLEQLQQALERRPAKVVAVGEIGLDLFGDDPQF---ERQQWLLDEQLKLAKRYDLPVILH 133
Query: 147 CRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA---------------VDSLKTKENL 191
R +K + LPR GV+H F G+ QA + + +
Sbjct: 134 SRRTHDKLAMHLKRH--DLPRTGVVHGFSGSLQQAERFVQLGYKIGVGGTITYPRASKTR 191
Query: 192 ETVKSIPEDRLLLETDCP 209
+ + +P LLLETD P
Sbjct: 192 DVIAKLPLASLLLETDAP 209
Score = 41.6 bits (96), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 41/94 (43%), Gaps = 17/94 (18%)
Query: 255 KQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA--------- 305
+QL L+ + LP+ LH R +K + LPR GV+H F G+ QA
Sbjct: 118 EQLKLAKRYDLPVILHSRRTHDKLAMHLKRH--DLPRTGVVHGFSGSLQQAERFVQLGYK 175
Query: 306 ------VDSLKTKENLETVKSIPEDRLLLETDCP 333
+ + + + + +P LLLETD P
Sbjct: 176 IGVGGTITYPRASKTRDVIAKLPLASLLLETDAP 209
>sp|Q93075|TATD2_HUMAN Putative deoxyribonuclease TATDN2 OS=Homo sapiens GN=TATDN2 PE=1
SV=2
Length = 761
Score = 80.9 bits (198), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 80/164 (48%), Gaps = 31/164 (18%)
Query: 68 LYSTVGCHPTRCSEF-ENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQL 126
++ GCHP + E+ LQ+L K VAFGE GLDY PV Q
Sbjct: 557 VWGAFGCHPHFARYYSESQERNLLQALRH------PKAVAFGEMGLDYSYKCTTPVPEQH 610
Query: 127 KYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAP---KLPRKGVIHSFDGT------ 177
K F +QL L+V+ K PL +HCR A D +EIMK++ P K+ R H F G+
Sbjct: 611 KVFERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHR----HCFTGSYPVIEP 666
Query: 178 ----------PFQAVDSLKTK-ENLETVKSIPEDRLLLETDCPW 210
F AV + + E E ++ IP +R+++ETD P+
Sbjct: 667 LLKYFPNMSVGFTAVLTYSSAWEAREALRQIPLERIIVETDAPY 710
Score = 53.5 bits (127), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 53/102 (51%), Gaps = 24/102 (23%)
Query: 253 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAP---KLPRKGVIHSFDGT-------- 301
F +QL L+V+ K PL +HCR A D +EIMK++ P K+ R H F G+
Sbjct: 613 FERQLQLAVSLKKPLVIHCREADEDLLEIMKKFVPPDYKIHR----HCFTGSYPVIEPLL 668
Query: 302 --------PFQAVDSLKTK-ENLETVKSIPEDRLLLETDCPW 334
F AV + + E E ++ IP +R+++ETD P+
Sbjct: 669 KYFPNMSVGFTAVLTYSSAWEAREALRQIPLERIIVETDAPY 710
>sp|Q9PRC8|Y017_UREPA Uncharacterized deoxyribonuclease UU017 OS=Ureaplasma parvum
serovar 3 (strain ATCC 700970) GN=UU017 PE=3 SV=1
Length = 265
Score = 79.0 bits (193), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
+ D ++ + + G+ IV G +++ S ++++ A+ + L +V HP END
Sbjct: 22 EFDDIIFKCYEQGIGLNIV-GVDLKTSQTAIQQAKKFKFLTCSVAIHPNDLHNIEND--- 77
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR 148
+L+K+I E + GE GLDY Q + Q +F+K ++L+ + PL LH R
Sbjct: 78 -FVALEKLIAENIDYISCIGECGLDYYHEQNYDHDFQKHWFKKHIELAKKYHKPLMLHIR 136
Query: 149 NAKSDFIEIM----------------KEYAPKLPRKGVIHSFDGT-PFQAVDSLKTKENL 191
NA D I I+ KEYA + G S+ G F+ + + E
Sbjct: 137 NAHDDAIAILKELAVQDVIIHCFTDKKEYAQQYIEMGYYISYPGVITFKPTKNNQLHELY 196
Query: 192 ETVKSIPEDRLLLETDCPWCEVKPSHAGFAY 222
E +K P D++L+ETD P+ P Y
Sbjct: 197 EAIKITPLDKILVETDAPYLTPVPKRGQTNY 227
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 69/170 (40%), Gaps = 41/170 (24%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIM----------------KEYAPKLPRKGVI 295
+F+K ++L+ + PL LH RNA D I I+ KEYA + G
Sbjct: 116 WFKKHIELAKKYHKPLMLHIRNAHDDAIAILKELAVQDVIIHCFTDKKEYAQQYIEMGYY 175
Query: 296 HSFDGT-PFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKV 354
S+ G F+ + + E E +K P D++L+ETD P+ P
Sbjct: 176 ISYPGVITFKPTKNNQLHELYEAIKITPLDKILVETDAPYLTPVPKRG------------ 223
Query: 355 KKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
N P ++ +A + G+ EK+ I+ +N+LR+
Sbjct: 224 ------------QTNYPYYVLYTSAFIANLLGITHEKMQKILLENSLRIL 261
>sp|Q89AG7|Y325_BUCBP Uncharacterized deoxyribonuclease bbp_325 OS=Buchnera aphidicola
subsp. Baizongia pistaciae (strain Bp) GN=bbp_325 PE=3
SV=1
Length = 265
Score = 78.6 bits (192), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/201 (31%), Positives = 95/201 (47%), Gaps = 23/201 (11%)
Query: 30 IDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGY 89
I VLN++ + I+ T++E+ LK + + + + G HP E +N+
Sbjct: 22 IQDVLNKSKKKHVNVILTVSTSIENFCYLLKFIKGNRNVLLSCGIHPHYIPENKNE---- 77
Query: 90 LQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149
+ L K +KVVA GE GLDY R Q+ FR+ + S+T K PL +H RN
Sbjct: 78 ILKLKKY--SNNEKVVAIGETGLDYYRNNDNKKLQQI-LFREHIKTSITLKKPLLIHTRN 134
Query: 150 AKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKTKENL-ETV 194
+ +D I I+KE K GV+HSF F + + K + + ET
Sbjct: 135 SINDTINILKEENSK-QCIGVLHSFTEDMHSARILLNMGFYISFSGIVTFKNSKIVHETA 193
Query: 195 KSIPEDRLLLETDCPWCEVKP 215
K +P DR+L+ETD P+ P
Sbjct: 194 KFVPIDRILIETDSPYLSPVP 214
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 16/104 (15%)
Query: 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG---------- 300
+ FR+ + S+T K PL +H RN+ +D I I+KE K GV+HSF
Sbjct: 112 ILFREHIKTSITLKKPLLIHTRNSINDTINILKEENSK-QCIGVLHSFTEDMHSARILLN 170
Query: 301 ----TPFQAVDSLKTKENL-ETVKSIPEDRLLLETDCPWCEVKP 339
F + + K + + ET K +P DR+L+ETD P+ P
Sbjct: 171 MGFYISFSGIVTFKNSKIVHETAKFVPIDRILIETDSPYLSPVP 214
>sp|P57436|Y355_BUCAI Uncharacterized deoxyribonuclease BU355 OS=Buchnera aphidicola
subsp. Acyrthosiphon pisum (strain APS) GN=BU355 PE=3
SV=1
Length = 264
Score = 76.6 bits (187), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 106/207 (51%), Gaps = 26/207 (12%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
+I+ VL +++ ++ + T + + + KL + ++ + G HP C + E +
Sbjct: 21 NIEDVLKKSYQNHVKNFLTVSTCISNFYNIKKLFKKYNTIFYSCGVHPLNCKK-ELNLFH 79
Query: 89 YLQSLDKIIKEGG--KKVVAFGEFGLDYDRVQYCPVET---QLKYFRKQLDLSVTHKLPL 143
+++L IK+ K V+A GE GLDY Y +T Q +FR+ + +++ K P+
Sbjct: 80 TIENLSNEIKKLSCIKDVIALGETGLDY----YYSSDTKKIQQDFFREHIRVAIKLKKPI 135
Query: 144 FLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG---TPFQAVD---------SLKTKENL 191
+H RNA D I+I++E + KGV+HSF G T + +D + K +L
Sbjct: 136 IVHSRNASEDTIKILQEENAE-KCKGVLHSFTGDYNTACKLLDLGFYISCSGIITFKNSL 194
Query: 192 E---TVKSIPEDRLLLETDCPWCEVKP 215
E T++ IP +RLL+ETD P+ P
Sbjct: 195 ELCKTIRKIPLNRLLIETDSPYLSPAP 221
Score = 56.6 bits (135), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 76/168 (45%), Gaps = 40/168 (23%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG---TPFQAVD- 307
+FR+ + +++ K P+ +H RNA D I+I++E + KGV+HSF G T + +D
Sbjct: 120 FFREHIRVAIKLKKPIIVHSRNASEDTIKILQEENAE-KCKGVLHSFTGDYNTACKLLDL 178
Query: 308 --------SLKTKENLE---TVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 356
+ K +LE T++ IP +RLL+ETD P+ P
Sbjct: 179 GFYISCSGIITFKNSLELCKTIRKIPLNRLLIETDSPYLSPAPYRG-------------- 224
Query: 357 EQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
N+PA + I E ++ ++ ++ LG I N LF
Sbjct: 225 ----------KGNQPAYLFYIAEYLSILKEIDIHALGHITTSNFRTLF 262
>sp|P47255|Y009_MYCGE Uncharacterized deoxyribonuclease MG009 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=MG009 PE=3
SV=1
Length = 262
Score = 61.2 bits (147), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 86/190 (45%), Gaps = 26/190 (13%)
Query: 47 VTGTNVEDSISSLKLAQS-DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVV 105
V GT++++S +++LA+ + L +T+G HP D + + L++++ +
Sbjct: 35 VVGTDLDNSKIAVELAKKYPDLLKATIGIHPNDVHLV--DFKKTKKQLNELLINNRNFIS 92
Query: 106 AFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKL 165
GE+G DY +E Q K+F Q +++ T+KL LH R+A EI+ P
Sbjct: 93 CIGEYGFDYHYTTEF-IELQNKFFEMQFEIAETNKLVHMLHIRDAHEKIYEILTRLKPTQ 151
Query: 166 PRKGVIHSF----------------DGTPFQAVDSLKTKENL----ETVKSIPEDRLLLE 205
P + H F + F ++ + T +N E +K IP + LL E
Sbjct: 152 P--VIFHCFSQDINIAKKLLSLKDLNIDIFFSIPGIVTFKNAQALHEALKIIPSELLLSE 209
Query: 206 TDCPWCEVKP 215
TD PW P
Sbjct: 210 TDSPWLTPSP 219
Score = 42.7 bits (99), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 46/174 (26%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSF------------- 298
+F Q +++ T+KL LH R+A EI+ P P + H F
Sbjct: 114 FFEMQFEIAETNKLVHMLHIRDAHEKIYEILTRLKPTQP--VIFHCFSQDINIAKKLLSL 171
Query: 299 ---DGTPFQAVDSLKTKENL----ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQH 351
+ F ++ + T +N E +K IP + LL ETD PW P
Sbjct: 172 KDLNIDIFFSIPGIVTFKNAQALHEALKIIPSELLLSETDSPWLTPSPFRG--------- 222
Query: 352 EKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405
K W P +V + VA ++ +E ++ II +N +LF+
Sbjct: 223 ----KVNW-----------PEYVVHTVSTVAEIKKIEIAEMKRIIVKNAKKLFW 261
>sp|Q503T5|TATD3_DANRE Putative deoxyribonuclease tatdn3 OS=Danio rerio GN=tatdn3 PE=2
SV=1
Length = 266
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 96/202 (47%), Gaps = 26/202 (12%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQS-DERLYSTVGCHPTRCSEFENDPE 87
D D VL RA AG++ ++ + ++L+++ ++ G HP + S ++
Sbjct: 20 DTDDVLLRAKKAGVKALVAVTEGASEFEKVIQLSKTYPGFVFPCFGIHPLQGSG-QDLHS 78
Query: 88 GYLQSLDKII---KEGGKKVVAFGEFGLDYDRVQYCPV----ETQLKYFRKQLDLSVTHK 140
+Q LD + + +VA GE GLD+ Y + + Q+K F KQL++S
Sbjct: 79 VRVQDLDPFLYLFQTYKDDIVAIGEIGLDFTP-WYSSITQERDEQMKVFIKQLEISKELD 137
Query: 141 LPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL-------------KT 187
LP+ +H R++ I MKE R+ ++H+F G P A++ + K
Sbjct: 138 LPVNVHSRSSAKVTIATMKELG---IRQALLHNFAGKPSVAMEGVQAGFCFSFPPAVSKN 194
Query: 188 KENLETVKSIPEDRLLLETDCP 209
++ + ++ IP + + LETD P
Sbjct: 195 EQRAKLIRQIPLEHVCLETDSP 216
Score = 58.5 bits (140), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 44/178 (24%)
Query: 240 MVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFD 299
+ + R+E + F KQL++S LP+ +H R++ I MKE R+ ++H+F
Sbjct: 115 ITQERDEQMKV--FIKQLEISKELDLPVNVHSRSSAKVTIATMKELG---IRQALLHNFA 169
Query: 300 GTPFQAVDSL-------------KTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAY 346
G P A++ + K ++ + ++ IP + + LETD P +
Sbjct: 170 GKPSVAMEGVQAGFCFSFPPAVSKNEQRAKLIRQIPLEHVCLETDSPALGL--------- 220
Query: 347 IRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
DK V RNEP+N+ E +A V+G+ + + + QN LRLF
Sbjct: 221 ---------------DKHV--RNEPSNVTISCEYIAKVKGISSDVVMEVTTQNALRLF 261
>sp|P0AFQ7|YCFH_ECOLI Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli (strain
K12) GN=ycfH PE=1 SV=1
Length = 265
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
D+D VL +A ++ + T + + L + + + G HP +NDP
Sbjct: 21 DVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFSCGVHPLN----QNDPYD 76
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKY---FRKQLDLSVTHKLPLFL 145
++ L ++ E G VVA GE GLDY Y P ET+++ F + + P+ +
Sbjct: 77 -VEDLRRLAAEEG--VVALGETGLDY---YYTP-ETKVRQQESFIHHIQIGRELNKPVIV 129
Query: 146 HCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKTKENL 191
H R+A++D + I++E GV+H F F + + + E L
Sbjct: 130 HTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQL 188
Query: 192 -ETVKSIPEDRLLLETDCPWCEVKPSHAG 219
+ + +P DRLL+ETD P+ P H G
Sbjct: 189 RDAARYVPLDRLLVETDSPYLAPVP-HRG 216
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 40/154 (25%)
Query: 266 PLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKT 311
P+ +H R+A++D + I++E GV+H F F + + +
Sbjct: 126 PVIVHTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRN 184
Query: 312 KENL-ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNE 370
E L + + +P DRLL+ETD P+ P H G N+
Sbjct: 185 AEQLRDAARYVPLDRLLVETDSPYLAPVP-HRG-----------------------KENQ 220
Query: 371 PANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
PA + + E +A ++GV E+L + N RLF
Sbjct: 221 PAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLF 254
>sp|P0AFQ8|YCFH_ECOL6 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=ycfH PE=3 SV=1
Length = 265
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
D+D VL +A ++ + T + + L + + + G HP +NDP
Sbjct: 21 DVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFSCGVHPLN----QNDPYD 76
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKY---FRKQLDLSVTHKLPLFL 145
++ L ++ E G VVA GE GLDY Y P ET+++ F + + P+ +
Sbjct: 77 -VEDLRRLAAEEG--VVALGETGLDY---YYTP-ETKVRQQESFIHHIQIGRELNKPVIV 129
Query: 146 HCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKTKENL 191
H R+A++D + I++E GV+H F F + + + E L
Sbjct: 130 HTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQL 188
Query: 192 -ETVKSIPEDRLLLETDCPWCEVKPSHAG 219
+ + +P DRLL+ETD P+ P H G
Sbjct: 189 RDAARYVPLDRLLVETDSPYLAPVP-HRG 216
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 40/154 (25%)
Query: 266 PLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKT 311
P+ +H R+A++D + I++E GV+H F F + + +
Sbjct: 126 PVIVHTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRN 184
Query: 312 KENL-ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNE 370
E L + + +P DRLL+ETD P+ P H G N+
Sbjct: 185 AEQLRDAARYVPLDRLLVETDSPYLAPVP-HRG-----------------------KENQ 220
Query: 371 PANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
PA + + E +A ++GV E+L + N RLF
Sbjct: 221 PAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLF 254
>sp|P0AFQ9|YCFH_ECO57 Uncharacterized deoxyribonuclease YcfH OS=Escherichia coli O157:H7
GN=ycfH PE=3 SV=1
Length = 265
Score = 59.3 bits (142), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 93/209 (44%), Gaps = 31/209 (14%)
Query: 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEG 88
D+D VL +A ++ + T + + L + + + G HP +NDP
Sbjct: 21 DVDDVLAKAAARDVKFCLAVATTLPGYLHMRDLVGERDNVVFSCGVHPLN----QNDPYD 76
Query: 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKY---FRKQLDLSVTHKLPLFL 145
++ L ++ E G VVA GE GLDY Y P ET+++ F + + P+ +
Sbjct: 77 -VEDLRRLAAEEG--VVALGETGLDY---YYTP-ETKVRQQESFIHHIQIGRELNKPVIV 129
Query: 146 HCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKTKENL 191
H R+A++D + I++E GV+H F F + + + E L
Sbjct: 130 HTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRNAEQL 188
Query: 192 -ETVKSIPEDRLLLETDCPWCEVKPSHAG 219
+ + +P DRLL+ETD P+ P H G
Sbjct: 189 RDAARYVPLDRLLVETDSPYLAPVP-HRG 216
Score = 49.7 bits (117), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 64/154 (41%), Gaps = 40/154 (25%)
Query: 266 PLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDG--------------TPFQAVDSLKT 311
P+ +H R+A++D + I++E GV+H F F + + +
Sbjct: 126 PVIVHTRDARADTLAILRE-EKVTDCGGVLHCFTEDRETAGKLLDLGFYISFSGIVTFRN 184
Query: 312 KENL-ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNE 370
E L + + +P DRLL+ETD P+ P H G N+
Sbjct: 185 AEQLRDAARYVPLDRLLVETDSPYLAPVP-HRG-----------------------KENQ 220
Query: 371 PANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404
PA + + E +A ++GV E+L + N RLF
Sbjct: 221 PAMVRDVAEYMAVLKGVAVEELAQVTTDNFARLF 254
>sp|P78005|Y009_MYCPN Uncharacterized deoxyribonuclease MG009 homolog OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=MPN_009 PE=3
SV=1
Length = 261
Score = 58.9 bits (141), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 80/190 (42%), Gaps = 26/190 (13%)
Query: 47 VTGTNVEDSISSLKLA-QSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVV 105
V GTN+ +S ++ LA Q + L + VG HP F D + +L K++ +
Sbjct: 35 VVGTNLTNSQIAVNLAKQHPDLLKAGVGIHPNDVQLF--DLKAAQATLKKLVSTHRSFIS 92
Query: 106 AFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKL 165
GE+G DY + + Q ++F Q L+ ++L LH R+ E++K PK
Sbjct: 93 CIGEYGFDYHYTKDY-ITQQEQFFLMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQ 151
Query: 166 PRKGVIHSFDGTPFQAVDSLKTKE-------------------NLETVKS-IPEDRLLLE 205
P V H F A+ L +E NL+ S IP + LL E
Sbjct: 152 PV--VFHCFSEDTNTALKLLTLREVGLKVYFSIPGIVTFKNAKNLQAALSVIPTELLLSE 209
Query: 206 TDCPWCEVKP 215
TD P+ P
Sbjct: 210 TDSPYLAPVP 219
Score = 34.3 bits (77), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/174 (22%), Positives = 62/174 (35%), Gaps = 46/174 (26%)
Query: 252 YFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 311
+F Q L+ ++L LH R+ E++K PK P V H F A+ L
Sbjct: 114 FFLMQFQLAEQYQLVHMLHVRDVHERIYEVLKRLKPKQPV--VFHCFSEDTNTALKLLTL 171
Query: 312 KE-------------------NLETVKS-IPEDRLLLETDCPWCEVKPSHAGFAYIRTQH 351
+E NL+ S IP + LL ETD P+ P
Sbjct: 172 REVGLKVYFSIPGIVTFKNAKNLQAALSVIPTELLLSETDSPYLAPVPFRG--------- 222
Query: 352 EKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405
K W P +V ++ +A ++ V ++ I N +LF+
Sbjct: 223 ----KTNW-----------PECVVHTVQTIADIKQVPLAEIKQAIVHNAKKLFW 261
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.414
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 191,448,224
Number of Sequences: 539616
Number of extensions: 8440622
Number of successful extensions: 19942
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 19469
Number of HSP's gapped (non-prelim): 215
length of query: 487
length of database: 191,569,459
effective HSP length: 121
effective length of query: 366
effective length of database: 126,275,923
effective search space: 46216987818
effective search space used: 46216987818
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)