Query psy4448
Match_columns 487
No_of_seqs 338 out of 1959
Neff 6.6
Searched_HMMs 29240
Date Fri Aug 16 17:17:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4448.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4448hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ipw_A Hydrolase TATD family p 100.0 2.2E-68 7.5E-73 542.8 28.3 291 1-407 26-323 (325)
2 3e2v_A 3'-5'-exonuclease; stru 100.0 5.6E-65 1.9E-69 528.4 28.3 297 1-407 12-395 (401)
3 3rcm_A TATD family hydrolase; 100.0 4.4E-59 1.5E-63 467.9 28.4 259 1-407 1-265 (287)
4 3gg7_A Uncharacterized metallo 100.0 7.7E-58 2.6E-62 451.1 18.6 247 1-410 1-248 (254)
5 2xio_A Putative deoxyribonucle 100.0 5.5E-56 1.9E-60 447.3 26.5 293 1-408 1-294 (301)
6 1zzm_A Putative deoxyribonucle 100.0 7.9E-50 2.7E-54 391.5 28.7 256 1-407 3-259 (259)
7 1xwy_A DNAse TATD, deoxyribonu 100.0 1.3E-49 4.6E-54 390.9 27.2 256 1-407 3-263 (264)
8 2y1h_A Putative deoxyribonucle 100.0 1.7E-47 5.9E-52 377.8 27.6 256 1-407 4-266 (272)
9 1j6o_A TATD-related deoxyribon 100.0 1.6E-46 5.6E-51 371.5 23.3 254 2-407 12-266 (268)
10 3guw_A Uncharacterized protein 100.0 5.4E-47 1.8E-51 375.3 8.4 227 2-408 1-250 (261)
11 1yix_A Deoxyribonuclease YCFH; 100.0 1.3E-42 4.6E-47 340.2 26.8 256 1-407 1-257 (265)
12 2gzx_A Putative TATD related D 100.0 5.8E-41 2E-45 328.2 27.0 257 2-409 1-258 (265)
13 2ob3_A Parathion hydrolase; me 100.0 1.6E-37 5.5E-42 316.9 13.3 254 1-405 15-325 (330)
14 2vc7_A Aryldialkylphosphatase; 100.0 7.1E-33 2.4E-37 278.2 12.5 267 1-405 16-314 (314)
15 3k2g_A Resiniferatoxin-binding 100.0 1.2E-31 4.2E-36 277.0 20.1 235 32-410 90-358 (364)
16 3gtx_A Organophosphorus hydrol 100.0 5.1E-32 1.7E-36 277.4 13.0 246 32-405 67-339 (339)
17 3rhg_A Putative phophotriester 100.0 6E-31 2E-35 271.9 15.9 232 34-410 81-348 (365)
18 1bf6_A Phosphotriesterase homo 100.0 3E-30 1E-34 255.2 19.1 261 2-405 6-291 (291)
19 3cjp_A Predicted amidohydrolas 99.9 3.6E-27 1.2E-31 232.1 18.3 223 2-407 3-265 (272)
20 4i6k_A Amidohydrolase family p 99.9 4.2E-26 1.4E-30 228.2 20.9 254 1-407 25-292 (294)
21 3pnz_A Phosphotriesterase fami 99.9 5.8E-26 2E-30 231.6 16.6 236 33-407 51-329 (330)
22 2f6k_A Metal-dependent hydrola 99.9 8.1E-26 2.8E-30 225.3 12.5 256 1-406 1-307 (307)
23 3ovg_A Amidohydrolase; structu 99.9 5.6E-25 1.9E-29 226.9 14.3 269 2-409 21-333 (363)
24 2dvt_A Thermophilic reversible 99.9 3.7E-24 1.3E-28 215.2 15.1 139 2-151 3-169 (327)
25 2ffi_A 2-pyrone-4,6-dicarboxyl 99.9 3.8E-24 1.3E-28 211.8 13.5 253 1-409 12-282 (288)
26 3irs_A Uncharacterized protein 99.9 6.4E-23 2.2E-27 205.1 15.6 246 1-409 3-283 (291)
27 3tn4_A Phosphotriesterase; lac 99.9 2.8E-22 9.6E-27 206.4 11.3 237 34-405 89-359 (360)
28 4do7_A Amidohydrolase 2; enzym 99.8 8.9E-19 3.1E-23 175.7 21.0 160 1-177 3-170 (303)
29 2gwg_A 4-oxalomesaconate hydra 99.8 2.3E-19 7.8E-24 183.2 15.3 236 32-406 53-332 (350)
30 2wm1_A 2-amino-3-carboxymucona 99.8 2.3E-18 7.8E-23 174.4 15.4 107 27-150 53-178 (336)
31 2hbv_A 2-amino-3-carboxymucona 99.7 1.3E-16 4.4E-21 161.6 17.6 105 28-150 58-181 (334)
32 3nqb_A Adenine deaminase 2; PS 99.6 2.4E-14 8.1E-19 157.0 17.4 157 3-187 91-256 (608)
33 2ics_A Adenine deaminase; TIM 99.4 4.1E-13 1.4E-17 136.4 10.3 150 3-178 56-217 (379)
34 3nur_A Amidohydrolase; TIM bar 99.3 6.2E-12 2.1E-16 129.3 13.5 136 1-151 22-197 (357)
35 3ij6_A Uncharacterized metal-d 99.3 1.3E-11 4.5E-16 124.4 12.8 135 1-149 3-164 (312)
36 3ipw_A Hydrolase TATD family p 99.3 8.2E-12 2.8E-16 126.8 10.6 119 130-261 180-301 (325)
37 3hm7_A Allantoinase; metallo-d 99.3 3.5E-11 1.2E-15 125.9 14.5 124 3-151 61-193 (448)
38 3e2v_A 3'-5'-exonuclease; stru 99.1 1.3E-11 4.4E-16 128.2 3.4 72 234-305 158-262 (401)
39 4inf_A Metal-dependent hydrola 99.1 1.3E-10 4.6E-15 120.0 7.9 107 29-150 90-214 (373)
40 2z00_A Dihydroorotase; zinc bi 99.1 1.8E-09 6.1E-14 111.3 15.1 120 3-150 51-178 (426)
41 3gg7_A Uncharacterized metallo 99.0 7.6E-11 2.6E-15 115.8 3.4 69 234-304 83-156 (254)
42 3rcm_A TATD family hydrolase; 99.0 1.5E-10 5.3E-15 115.5 3.7 69 235-304 95-166 (287)
43 4f0r_A 5-methylthioadenosine/S 98.9 1.1E-08 3.8E-13 106.2 16.0 142 33-187 115-271 (447)
44 2qpx_A Predicted metal-depende 98.9 8E-09 2.7E-13 106.7 14.3 76 293-407 281-371 (376)
45 4d9a_A 2-pyrone-4,6-dicarbaxyl 98.9 1.2E-07 4.1E-12 94.9 20.0 152 2-176 26-183 (303)
46 2xio_A Putative deoxyribonucle 98.7 3.3E-09 1.1E-13 106.0 3.2 67 235-302 107-177 (301)
47 3ooq_A Amidohydrolase; structu 98.6 3.5E-08 1.2E-12 101.4 6.6 141 32-187 102-265 (396)
48 2y1h_A Putative deoxyribonucle 98.6 2.7E-08 9.3E-13 97.2 4.6 53 246-301 121-173 (272)
49 1zzm_A Putative deoxyribonucle 98.5 7.5E-08 2.6E-12 93.2 4.7 54 246-301 109-162 (259)
50 3guw_A Uncharacterized protein 98.5 9.9E-08 3.4E-12 93.9 5.1 61 235-297 96-161 (261)
51 1xwy_A DNAse TATD, deoxyribonu 98.4 8.9E-08 3E-12 93.0 3.8 65 236-301 94-161 (264)
52 2vun_A Enamidase; nicotinate d 98.3 1.3E-06 4.5E-11 88.6 10.3 56 127-187 174-239 (386)
53 4dzi_A Putative TIM-barrel met 98.3 7E-06 2.4E-10 86.0 15.7 113 28-151 101-235 (423)
54 3lnp_A Amidohydrolase family p 98.2 6.2E-05 2.1E-09 78.4 20.6 141 34-187 138-298 (468)
55 3gnh_A L-lysine, L-arginine ca 98.2 4.2E-05 1.4E-09 77.7 18.4 173 3-187 60-261 (403)
56 1j6o_A TATD-related deoxyribon 98.2 5.7E-07 2E-11 88.0 4.3 84 235-332 101-187 (268)
57 4dzh_A Amidohydrolase; adenosi 98.1 0.00037 1.3E-08 73.0 22.6 141 36-187 127-280 (472)
58 2ob3_A Parathion hydrolase; me 98.0 1.4E-06 4.7E-11 88.2 2.3 55 246-302 143-203 (330)
59 3pnz_A Phosphotriesterase fami 98.0 1.4E-06 4.8E-11 88.5 1.7 64 237-301 154-221 (330)
60 3k2g_A Resiniferatoxin-binding 98.0 2.4E-06 8.3E-11 87.8 3.3 64 236-300 176-243 (364)
61 3gtx_A Organophosphorus hydrol 98.0 2.3E-06 7.9E-11 87.2 2.7 65 237-302 159-227 (339)
62 3be7_A Zn-dependent arginine c 97.9 0.00054 1.8E-08 69.7 19.8 55 127-187 206-260 (408)
63 1yix_A Deoxyribonuclease YCFH; 97.8 7.5E-06 2.6E-10 79.0 3.6 56 245-301 105-160 (265)
64 3mpg_A Dihydroorotase, dhoase; 97.8 4.2E-05 1.4E-09 79.1 9.0 120 3-150 55-182 (428)
65 4dyk_A Amidohydrolase; adenosi 97.8 0.00033 1.1E-08 72.4 15.0 140 34-187 118-273 (451)
66 3rhg_A Putative phophotriester 97.7 6.3E-06 2.2E-10 84.8 1.5 65 237-302 166-237 (365)
67 2vm8_A Dihydropyrimidinase-rel 97.7 7.9E-05 2.7E-09 78.7 9.6 127 3-149 80-212 (501)
68 1gkr_A Hydantoinase, non-ATP d 97.6 0.00018 6.1E-09 74.4 10.6 124 3-150 56-187 (458)
69 3h4u_A Amidohydrolase; signatu 97.6 0.0012 4.2E-08 68.8 16.8 62 126-187 239-311 (479)
70 3feq_A Putative amidohydrolase 97.6 0.00091 3.1E-08 68.1 15.0 172 3-187 61-266 (423)
71 2vc7_A Aryldialkylphosphatase; 97.6 3.7E-05 1.3E-09 76.2 3.9 57 244-300 144-203 (314)
72 2ogj_A Dihydroorotase; TIM bar 97.5 0.00035 1.2E-08 71.7 11.2 152 3-177 73-236 (417)
73 2r8c_A Putative amidohydrolase 97.5 0.0016 5.4E-08 66.9 15.7 172 3-187 61-269 (426)
74 3ovg_A Amidohydrolase; structu 97.5 4.4E-05 1.5E-09 78.4 3.7 55 243-300 161-218 (363)
75 2z26_A Dihydroorotase, dhoase; 97.5 0.0038 1.3E-07 63.1 17.4 119 3-150 12-143 (347)
76 2qt3_A N-isopropylammelide iso 97.5 0.0061 2.1E-07 61.6 19.0 51 126-177 197-254 (403)
77 2gzx_A Putative TATD related D 97.4 8E-05 2.7E-09 71.6 4.0 76 245-333 103-178 (265)
78 1gkp_A Hydantoinase; hydrolase 97.3 0.00064 2.2E-08 70.3 9.2 128 3-149 54-185 (458)
79 1xrt_A Dihydroorotase, dhoase; 97.3 0.00031 1.1E-08 73.5 6.6 121 3-151 102-230 (467)
80 2qs8_A XAA-Pro dipeptidase; am 97.2 0.041 1.4E-06 55.9 22.5 56 126-187 215-270 (418)
81 3tn4_A Phosphotriesterase; lac 97.2 9E-05 3.1E-09 76.0 2.1 57 245-301 187-246 (360)
82 2ftw_A Dihydropyrimidine amido 97.2 0.00052 1.8E-08 73.2 7.4 142 3-162 62-209 (521)
83 1bf6_A Phosphotriesterase homo 97.2 0.00015 5.1E-09 70.6 2.7 55 246-301 133-191 (291)
84 3sfw_A Dihydropyrimidinase; hy 97.1 0.00078 2.7E-08 70.5 8.1 128 3-150 54-187 (461)
85 3gri_A Dihydroorotase, dhoase; 97.1 0.00064 2.2E-08 70.4 6.7 121 3-151 54-182 (424)
86 3ls9_A Triazine hydrolase; atr 96.7 0.02 6.9E-07 58.8 14.1 144 37-187 118-289 (456)
87 4aql_A Guanine deaminase; hydr 96.5 0.1 3.5E-06 54.6 18.3 62 126-187 242-316 (476)
88 2vr2_A Dihydropyrimidinase; hy 96.4 0.0031 1.1E-07 67.5 6.2 130 3-150 85-218 (541)
89 2q09_A Imidazolonepropionase; 96.3 0.76 2.6E-05 46.4 23.4 58 126-187 222-280 (416)
90 2i9u_A Cytosine/guanine deamin 96.2 0.07 2.4E-06 54.7 15.1 143 35-187 120-284 (439)
91 4i6k_A Amidohydrolase family p 96.0 0.095 3.2E-06 51.3 13.9 160 31-213 83-254 (294)
92 3e74_A Allantoinase; (beta/alp 95.6 0.042 1.4E-06 57.8 10.1 124 3-150 75-210 (473)
93 2paj_A Putative cytosine/guani 95.5 0.062 2.1E-06 55.9 11.0 147 35-187 124-300 (492)
94 3v7p_A Amidohydrolase family p 95.4 0.049 1.7E-06 56.2 9.8 62 126-187 186-272 (427)
95 2ood_A BLR3880 protein; PSI-II 95.4 0.14 4.9E-06 53.3 13.4 145 34-187 124-288 (475)
96 3mdu_A N-formimino-L-glutamate 95.4 0.39 1.3E-05 49.6 16.6 61 126-187 213-284 (453)
97 3dc8_A Dihydropyrimidinase; TI 95.2 0.094 3.2E-06 55.4 11.3 127 3-150 52-184 (490)
98 3gip_A N-acyl-D-glutamate deac 95.2 0.075 2.5E-06 55.8 10.5 71 88-163 164-242 (480)
99 3cjp_A Predicted amidohydrolas 95.1 0.0085 2.9E-07 57.8 2.5 72 249-333 128-205 (272)
100 4ac7_C Urease subunit alpha; h 95.1 0.041 1.4E-06 59.5 8.1 107 3-149 133-252 (570)
101 4ubp_C Protein (urease (chain 95.1 0.041 1.4E-06 59.5 8.1 107 3-149 133-252 (570)
102 2p9b_A Possible prolidase; pro 94.1 0.97 3.3E-05 46.4 15.6 54 126-185 226-279 (458)
103 2imr_A Hypothetical protein DR 93.7 1.1 3.9E-05 45.4 15.1 23 385-407 376-398 (420)
104 3iv8_A N-acetylglucosamine-6-p 93.7 0.92 3.1E-05 46.5 14.2 39 370-408 309-347 (381)
105 1nfg_A D-hydantoinase; TIM bar 93.6 0.21 7E-06 51.3 9.3 126 3-149 53-184 (457)
106 3pnu_A Dihydroorotase; TIM bar 93.6 3.6 0.00012 41.6 18.4 38 369-408 281-318 (359)
107 1o12_A N-acetylglucosamine-6-p 93.3 0.22 7.6E-06 50.4 8.7 40 369-408 302-341 (376)
108 1ra0_A Cytosine deaminase; alp 93.1 0.93 3.2E-05 46.0 13.2 63 124-187 196-272 (430)
109 1e9y_B Urease subunit beta; hy 92.9 0.34 1.2E-05 52.3 10.0 106 3-149 132-251 (569)
110 2fty_A Dihydropyrimidinase; al 90.9 0.21 7.1E-06 53.7 5.4 132 3-150 57-202 (559)
111 1m65_A Hypothetical protein YC 90.9 0.2 6.8E-06 47.2 4.6 38 1-48 1-38 (245)
112 2ffi_A 2-pyrone-4,6-dicarboxyl 90.7 0.3 1E-05 47.0 5.8 51 248-301 121-172 (288)
113 4f0l_A Amidohydrolase; ssgcid, 90.5 3.9 0.00013 41.7 14.5 60 126-187 223-293 (458)
114 2yb1_A Amidohydrolase; HET: AM 89.8 0.45 1.5E-05 46.7 6.3 54 1-65 1-55 (292)
115 1p1m_A Hypothetical protein TM 87.7 8.5 0.00029 38.4 14.3 25 126-150 180-204 (406)
116 1o12_A N-acetylglucosamine-6-p 87.4 3.4 0.00012 41.5 11.2 29 256-284 173-202 (376)
117 2yxo_A Histidinol phosphatase; 87.4 0.71 2.4E-05 43.9 5.8 36 3-48 1-36 (267)
118 2vhl_A N-acetylglucosamine-6-p 85.5 4.1 0.00014 40.6 10.6 35 373-407 320-354 (396)
119 4do7_A Amidohydrolase 2; enzym 85.4 0.54 1.8E-05 46.0 3.8 129 247-408 118-290 (303)
120 2qpx_A Predicted metal-depende 84.8 1.1 3.6E-05 45.7 5.8 121 88-211 146-322 (376)
121 3irs_A Uncharacterized protein 83.9 0.54 1.9E-05 45.8 3.1 37 249-285 136-181 (291)
122 1rk6_A D-aminoacylase; TIM bar 82.1 0.62 2.1E-05 48.7 2.8 44 128-175 215-266 (496)
123 3mpg_A Dihydroorotase, dhoase; 81.4 6.7 0.00023 39.7 10.3 35 373-407 330-364 (428)
124 2dvt_A Thermophilic reversible 81.2 0.4 1.4E-05 46.8 0.9 115 247-407 141-325 (327)
125 1yrr_A N-acetylglucosamine-6-p 81.0 6.5 0.00022 39.0 9.9 36 372-407 311-346 (382)
126 2i5g_A Amidohydrolase; NYSGXRC 78.4 17 0.00056 36.3 11.7 135 252-405 164-320 (325)
127 3rys_A Adenosine deaminase 1; 78.2 5.3 0.00018 40.1 8.1 76 100-187 161-240 (343)
128 4gy7_A Urease; JACK bean, hydr 77.9 10 0.00034 42.8 11.0 107 3-149 403-522 (840)
129 3o0f_A Putative metal-dependen 77.8 3.5 0.00012 40.8 6.5 53 2-65 13-66 (301)
130 1onw_A Isoaspartyl dipeptidase 77.6 26 0.0009 34.5 13.2 30 378-407 314-343 (390)
131 2anu_A Hypothetical protein TM 77.3 2.2 7.6E-05 40.6 4.8 36 2-48 20-55 (255)
132 3e38_A Two-domain protein cont 77.2 1.8 6.1E-05 43.7 4.2 37 1-48 18-54 (343)
133 3nur_A Amidohydrolase; TIM bar 76.4 0.85 2.9E-05 46.1 1.6 22 192-213 301-322 (357)
134 1xky_A Dihydrodipicolinate syn 76.4 40 0.0014 32.9 13.7 135 30-186 35-186 (301)
135 3ngf_A AP endonuclease, family 76.0 29 0.00098 32.5 12.3 136 27-163 22-177 (269)
136 3icj_A Uncharacterized metal-d 74.9 59 0.002 34.3 15.6 138 33-187 227-388 (534)
137 1onw_A Isoaspartyl dipeptidase 73.1 3.4 0.00012 41.2 5.1 18 316-333 269-287 (390)
138 2f6k_A Metal-dependent hydrola 72.3 1.4 4.6E-05 42.5 1.8 26 251-276 135-160 (307)
139 4inf_A Metal-dependent hydrola 72.1 1.3 4.3E-05 45.2 1.6 21 192-212 321-341 (373)
140 1f6k_A N-acetylneuraminate lya 72.0 55 0.0019 31.7 13.5 137 30-186 26-178 (293)
141 2qee_A BH0493 protein; amidohy 71.9 2.5 8.7E-05 43.9 3.8 36 1-43 22-64 (437)
142 2wm1_A 2-amino-3-carboxymucona 71.6 1.3 4.6E-05 43.5 1.6 27 381-407 305-331 (336)
143 2gwg_A 4-oxalomesaconate hydra 71.4 1.1 3.9E-05 44.5 1.0 30 247-276 155-184 (350)
144 3qy7_A Tyrosine-protein phosph 70.8 7.1 0.00024 37.6 6.6 37 370-409 201-237 (262)
145 3tak_A DHDPS, dihydrodipicolin 70.4 71 0.0024 30.8 13.8 138 30-187 24-176 (291)
146 3qze_A DHDPS, dihydrodipicolin 69.6 73 0.0025 31.2 13.8 136 30-187 46-198 (314)
147 3ij6_A Uncharacterized metal-d 69.2 1.4 4.9E-05 43.4 1.2 30 377-407 277-306 (312)
148 3dcp_A Histidinol-phosphatase; 68.3 12 0.00041 36.3 7.7 38 2-48 1-38 (283)
149 3dx5_A Uncharacterized protein 67.4 80 0.0027 29.3 13.6 133 28-163 15-164 (286)
150 2v9d_A YAGE; dihydrodipicolini 67.3 87 0.003 31.1 14.0 136 30-187 54-207 (343)
151 3na8_A Putative dihydrodipicol 67.1 81 0.0028 30.9 13.6 136 30-187 47-200 (315)
152 4d9a_A 2-pyrone-4,6-dicarbaxyl 66.8 11 0.00037 36.8 7.0 149 31-212 84-253 (303)
153 2gwn_A Dihydroorotase; zinc-bi 66.7 42 0.0014 34.1 11.8 23 385-407 353-375 (452)
154 2r91_A 2-keto-3-deoxy-(6-phosp 66.6 38 0.0013 32.7 10.9 136 30-186 21-167 (286)
155 2puz_A Imidazolonepropionase; 66.6 59 0.002 32.1 12.8 57 127-187 235-292 (419)
156 1i60_A IOLI protein; beta barr 66.3 56 0.0019 30.1 11.8 136 27-163 13-166 (278)
157 3b0x_A DNA polymerase beta fam 65.6 6.4 0.00022 42.3 5.5 36 2-48 337-372 (575)
158 3cpr_A Dihydrodipicolinate syn 65.1 1E+02 0.0036 29.9 14.4 137 30-186 39-190 (304)
159 3daq_A DHDPS, dihydrodipicolin 64.8 1E+02 0.0035 29.7 13.8 137 29-187 24-177 (292)
160 2nuw_A 2-keto-3-deoxygluconate 64.2 47 0.0016 32.1 11.1 102 30-148 22-131 (288)
161 2q01_A Uronate isomerase; stru 64.2 2.7 9.4E-05 44.5 2.2 31 249-279 288-321 (497)
162 3tc3_A UV damage endonuclease; 64.0 32 0.0011 34.0 9.8 74 125-209 100-199 (310)
163 3hm7_A Allantoinase; metallo-d 63.6 5.9 0.0002 40.4 4.6 36 372-407 343-378 (448)
164 1itu_A Renal dipeptidase; glyc 63.3 52 0.0018 33.3 11.5 117 252-405 203-335 (369)
165 3e96_A Dihydrodipicolinate syn 63.3 45 0.0015 32.7 10.9 135 30-187 35-182 (316)
166 3d0c_A Dihydrodipicolinate syn 63.1 57 0.0019 32.0 11.5 137 30-187 35-182 (314)
167 2ojp_A DHDPS, dihydrodipicolin 62.9 89 0.003 30.1 12.8 41 121-162 52-93 (292)
168 2r8w_A AGR_C_1641P; APC7498, d 62.7 1.2E+02 0.0042 29.8 14.9 136 30-187 57-213 (332)
169 2yxg_A DHDPS, dihydrodipicolin 62.5 1.1E+02 0.0039 29.3 14.7 137 30-186 23-175 (289)
170 4f0r_A 5-methylthioadenosine/S 62.3 6.8 0.00023 39.6 4.8 133 249-408 198-359 (447)
171 2wje_A CPS4B, tyrosine-protein 62.2 5.3 0.00018 37.7 3.7 37 2-47 4-43 (247)
172 1w3i_A EDA, 2-keto-3-deoxy glu 62.1 42 0.0014 32.5 10.3 136 30-186 22-168 (293)
173 1j5s_A Uronate isomerase; TM00 62.0 1.7 5.9E-05 45.6 0.2 24 248-271 280-303 (463)
174 1qwg_A PSL synthase;, (2R)-pho 61.6 68 0.0023 30.7 11.2 107 38-160 11-122 (251)
175 2rfg_A Dihydrodipicolinate syn 61.0 95 0.0033 30.0 12.7 136 30-187 23-175 (297)
176 1k77_A EC1530, hypothetical pr 60.0 1E+02 0.0034 28.1 12.2 135 28-163 15-170 (260)
177 3m5v_A DHDPS, dihydrodipicolin 59.9 57 0.0019 31.7 10.8 41 121-161 58-99 (301)
178 3fkr_A L-2-keto-3-deoxyarabona 59.3 1.3E+02 0.0046 29.2 14.4 140 30-187 31-187 (309)
179 3iac_A Glucuronate isomerase; 59.0 3.3 0.00011 43.5 1.6 60 1-66 30-97 (473)
180 1eye_A DHPS 1, dihydropteroate 58.5 71 0.0024 30.9 11.1 36 250-285 154-196 (280)
181 3a5f_A Dihydrodipicolinate syn 58.2 79 0.0027 30.5 11.5 136 30-187 24-176 (291)
182 3feq_A Putative amidohydrolase 58.0 53 0.0018 32.3 10.6 48 249-302 210-257 (423)
183 3l21_A DHDPS, dihydrodipicolin 57.7 1.4E+02 0.0048 28.9 16.8 136 30-185 38-188 (304)
184 3obe_A Sugar phosphate isomera 57.1 1E+02 0.0034 29.5 12.1 21 28-48 36-56 (305)
185 2w9m_A Polymerase X; SAXS, DNA 56.3 8.4 0.00029 41.4 4.4 36 2-48 327-362 (578)
186 3s5o_A 4-hydroxy-2-oxoglutarat 56.3 1.5E+02 0.0051 28.8 14.5 139 30-186 37-190 (307)
187 3eb2_A Putative dihydrodipicol 56.2 1.5E+02 0.0051 28.7 13.8 136 30-187 27-179 (300)
188 3flu_A DHDPS, dihydrodipicolin 56.2 1.5E+02 0.005 28.7 15.7 136 30-187 30-182 (297)
189 4gxw_A Adenosine deaminase; am 55.9 24 0.00082 35.8 7.5 90 102-206 180-274 (380)
190 2pgf_A Adenosine deaminase; me 55.5 1.1E+02 0.0038 30.5 12.4 72 102-187 200-278 (371)
191 2hbv_A 2-amino-3-carboxymucona 55.2 7.3 0.00025 38.1 3.4 55 316-407 279-333 (334)
192 2ics_A Adenine deaminase; TIM 54.5 8.3 0.00028 37.8 3.7 121 249-408 166-319 (379)
193 2r8c_A Putative amidohydrolase 54.2 65 0.0022 32.0 10.5 47 249-301 213-259 (426)
194 3b4u_A Dihydrodipicolinate syn 54.0 58 0.002 31.5 9.7 137 30-186 26-183 (294)
195 2j6v_A UV endonuclease, UVDE; 53.9 98 0.0033 30.1 11.4 24 126-149 102-125 (301)
196 3nqb_A Adenine deaminase 2; PS 53.7 6.6 0.00023 42.5 3.0 124 247-407 198-337 (608)
197 3kws_A Putative sugar isomeras 53.5 1.4E+02 0.0049 27.7 15.9 133 28-163 38-190 (287)
198 3si9_A DHDPS, dihydrodipicolin 53.2 1.7E+02 0.0058 28.5 14.9 136 30-187 45-198 (315)
199 3h5d_A DHDPS, dihydrodipicolin 52.9 1.6E+02 0.0054 28.7 12.8 139 28-186 28-181 (311)
200 2x7v_A Probable endonuclease 4 52.6 1.3E+02 0.0045 27.7 11.8 65 123-187 85-166 (287)
201 3neh_A Renal dipeptidase famil 52.1 52 0.0018 32.6 9.1 103 270-407 203-311 (318)
202 3qc0_A Sugar isomerase; TIM ba 52.0 25 0.00087 32.5 6.6 135 28-163 18-170 (275)
203 3ls9_A Triazine hydrolase; atr 51.7 1.4E+02 0.0049 29.5 12.6 27 251-277 219-245 (456)
204 2q02_A Putative cytoplasmic pr 51.5 1.4E+02 0.0049 27.2 12.1 125 28-162 19-162 (272)
205 3u0h_A Xylose isomerase domain 51.1 1.2E+02 0.0042 27.8 11.3 135 27-163 15-171 (281)
206 2vhl_A N-acetylglucosamine-6-p 51.0 70 0.0024 31.4 10.0 29 255-283 186-215 (396)
207 2ojp_A DHDPS, dihydrodipicolin 51.0 1E+02 0.0035 29.7 11.0 136 30-187 24-176 (292)
208 4aql_A Guanine deaminase; hydr 50.4 1.8E+02 0.006 29.7 13.3 35 251-285 243-277 (476)
209 3dz1_A Dihydrodipicolinate syn 48.7 2E+02 0.0068 28.0 15.2 138 30-187 31-185 (313)
210 1o5k_A DHDPS, dihydrodipicolin 48.7 2E+02 0.0067 27.9 16.2 138 30-187 35-188 (306)
211 2ehh_A DHDPS, dihydrodipicolin 48.6 1.9E+02 0.0065 27.7 16.7 138 30-187 23-176 (294)
212 1tz9_A Mannonate dehydratase; 48.3 63 0.0022 31.9 9.2 39 29-67 22-69 (367)
213 3bdk_A D-mannonate dehydratase 47.9 1.4E+02 0.0049 30.1 11.8 39 125-163 198-249 (386)
214 3fst_A 5,10-methylenetetrahydr 47.6 88 0.003 30.7 9.8 23 29-51 98-120 (304)
215 2vc6_A MOSA, dihydrodipicolina 46.8 2E+02 0.0069 27.5 14.1 135 30-186 23-175 (292)
216 3tva_A Xylose isomerase domain 46.6 1.4E+02 0.0049 27.7 11.1 48 28-75 21-73 (290)
217 2g0w_A LMO2234 protein; putati 46.0 1.9E+02 0.0066 27.1 12.4 125 28-162 36-175 (296)
218 2wkj_A N-acetylneuraminate lya 45.5 2.2E+02 0.0074 27.5 16.1 137 30-186 34-186 (303)
219 3vni_A Xylose isomerase domain 45.4 1.3E+02 0.0044 28.0 10.6 132 28-163 17-176 (294)
220 1aj0_A DHPS, dihydropteroate s 44.9 2.2E+02 0.0076 27.4 14.1 59 88-150 39-100 (282)
221 3tva_A Xylose isomerase domain 43.3 2E+02 0.007 26.6 15.4 141 53-208 21-185 (290)
222 3fkr_A L-2-keto-3-deoxyarabona 43.2 72 0.0025 31.1 8.5 100 103-272 45-145 (309)
223 3m5v_A DHDPS, dihydrodipicolin 42.9 2.4E+02 0.0081 27.2 16.4 139 29-187 29-184 (301)
224 2hmc_A AGR_L_411P, dihydrodipi 42.4 2.6E+02 0.009 27.6 13.8 136 30-187 49-202 (344)
225 3flu_A DHDPS, dihydrodipicolin 42.2 73 0.0025 30.9 8.3 40 121-161 58-98 (297)
226 2zds_A Putative DNA-binding pr 41.7 1.1E+02 0.0039 29.0 9.7 134 28-162 15-200 (340)
227 2i5g_A Amidohydrolase; NYSGXRC 41.2 55 0.0019 32.4 7.3 76 126-211 162-253 (325)
228 3cny_A Inositol catabolism pro 41.0 1.1E+02 0.0037 28.5 9.2 131 28-162 31-181 (301)
229 4dzi_A Putative TIM-barrel met 40.8 7.4 0.00025 40.2 0.8 26 383-408 372-397 (423)
230 2p9b_A Possible prolidase; pro 40.8 2.8E+02 0.0097 27.5 13.2 34 374-407 356-389 (458)
231 3apt_A Methylenetetrahydrofola 40.6 80 0.0027 30.9 8.3 23 29-51 87-109 (310)
232 2qt3_A N-isopropylammelide iso 39.9 34 0.0012 33.6 5.6 48 251-299 198-252 (403)
233 1p1m_A Hypothetical protein TM 39.6 24 0.00081 35.0 4.4 28 251-278 181-208 (406)
234 1tx2_A DHPS, dihydropteroate s 39.1 2.8E+02 0.0095 26.9 12.9 58 89-150 65-125 (297)
235 1ceo_A Cellulase CELC; glycosy 38.3 97 0.0033 29.9 8.6 54 92-150 264-317 (343)
236 3si9_A DHDPS, dihydrodipicolin 38.3 82 0.0028 30.9 8.0 40 121-161 73-113 (315)
237 1xky_A Dihydrodipicolinate syn 38.1 89 0.003 30.3 8.2 40 121-161 63-103 (301)
238 1ur4_A Galactanase; hydrolase, 38.1 3.3E+02 0.011 27.5 20.2 126 121-263 175-310 (399)
239 3d0c_A Dihydrodipicolinate syn 38.1 90 0.0031 30.5 8.3 39 121-160 63-101 (314)
240 2r8w_A AGR_C_1641P; APC7498, d 37.8 84 0.0029 31.1 8.0 39 121-160 85-124 (332)
241 3ooq_A Amidohydrolase; structu 37.7 47 0.0016 32.9 6.3 65 130-211 234-310 (396)
242 3qze_A DHDPS, dihydrodipicolin 37.7 93 0.0032 30.4 8.3 54 103-161 60-114 (314)
243 2zvr_A Uncharacterized protein 37.4 1.6E+02 0.0055 27.4 9.8 26 122-147 108-133 (290)
244 2vc6_A MOSA, dihydrodipicolina 37.2 89 0.003 30.1 8.0 39 121-160 51-90 (292)
245 3ly0_A Dipeptidase AC. metallo 37.1 2E+02 0.0068 28.9 10.7 109 262-405 224-352 (364)
246 3qc0_A Sugar isomerase; TIM ba 36.9 83 0.0029 28.9 7.6 86 53-147 18-104 (275)
247 3qfe_A Putative dihydrodipicol 36.8 3E+02 0.01 26.7 16.0 139 30-186 34-189 (318)
248 3vni_A Xylose isomerase domain 36.5 88 0.003 29.2 7.8 84 54-144 18-105 (294)
249 2pgf_A Adenosine deaminase; me 36.4 1.1E+02 0.0037 30.5 8.7 35 372-407 325-359 (371)
250 1qtw_A Endonuclease IV; DNA re 35.5 1.5E+02 0.005 27.3 9.1 18 28-45 12-29 (285)
251 3cpr_A Dihydrodipicolinate syn 35.5 1E+02 0.0034 30.0 8.1 40 121-161 67-107 (304)
252 2v9d_A YAGE; dihydrodipicolini 35.0 94 0.0032 30.9 7.9 39 121-160 82-121 (343)
253 2rfg_A Dihydrodipicolinate syn 35.0 92 0.0032 30.1 7.7 39 121-160 51-90 (297)
254 1i60_A IOLI protein; beta barr 34.9 2.6E+02 0.0089 25.3 10.9 55 89-144 47-101 (278)
255 3na8_A Putative dihydrodipicol 34.5 1E+02 0.0035 30.1 8.0 40 121-161 75-115 (315)
256 1yrr_A N-acetylglucosamine-6-p 34.4 3.1E+02 0.01 26.5 11.7 31 254-284 178-209 (382)
257 1o5k_A DHDPS, dihydrodipicolin 34.4 96 0.0033 30.2 7.8 39 121-160 63-102 (306)
258 2hnh_A DNA polymerase III alph 34.2 32 0.0011 39.0 4.8 37 3-48 6-42 (910)
259 3l23_A Sugar phosphate isomera 34.1 3E+02 0.01 25.9 11.5 38 29-66 30-72 (303)
260 2ehh_A DHDPS, dihydrodipicolin 33.5 1.2E+02 0.0039 29.3 8.1 39 121-160 51-90 (294)
261 3tak_A DHDPS, dihydrodipicolin 33.4 1.1E+02 0.0038 29.4 8.0 39 121-160 52-91 (291)
262 3b4u_A Dihydrodipicolinate syn 33.2 1.2E+02 0.0042 29.1 8.3 25 247-271 113-140 (294)
263 3lnp_A Amidohydrolase family p 33.0 39 0.0013 34.1 4.8 35 251-285 227-261 (468)
264 3iix_A Biotin synthetase, puta 33.0 2.2E+02 0.0074 27.4 10.2 47 127-177 117-163 (348)
265 3id7_A Dipeptidase; streptomyc 32.9 1.8E+02 0.0061 29.7 9.7 62 317-405 306-367 (400)
266 2yxg_A DHDPS, dihydrodipicolin 32.8 1.1E+02 0.0037 29.5 7.8 39 121-160 51-90 (289)
267 3g8r_A Probable spore coat pol 31.7 78 0.0027 31.8 6.6 24 31-54 24-52 (350)
268 1lbq_A Ferrochelatase; rossman 31.5 2.8E+02 0.0096 27.7 10.8 137 27-175 108-276 (362)
269 3u0h_A Xylose isomerase domain 31.5 91 0.0031 28.7 6.8 87 53-145 16-102 (281)
270 3lmz_A Putative sugar isomeras 31.3 3E+02 0.01 25.0 11.8 57 126-186 88-152 (257)
271 3rys_A Adenosine deaminase 1; 30.4 3.8E+02 0.013 26.3 11.5 138 39-212 131-285 (343)
272 1gvf_A Tagatose-bisphosphate a 30.4 1.2E+02 0.004 29.5 7.5 61 127-187 29-96 (286)
273 1vli_A Spore coat polysacchari 30.2 1.3E+02 0.0044 30.6 8.0 13 87-99 100-112 (385)
274 2wkj_A N-acetylneuraminate lya 29.8 1.1E+02 0.0039 29.6 7.4 39 121-160 62-101 (303)
275 3pao_A Adenosine deaminase; st 29.7 71 0.0024 31.5 5.9 74 102-187 160-237 (326)
276 3l21_A DHDPS, dihydrodipicolin 29.5 1.2E+02 0.0042 29.4 7.6 40 121-161 66-106 (304)
277 3nco_A Endoglucanase fncel5A; 29.4 1.1E+02 0.0039 29.2 7.4 52 93-149 245-296 (320)
278 3bdk_A D-mannonate dehydratase 29.4 4.5E+02 0.015 26.4 17.4 57 88-146 64-123 (386)
279 2qw5_A Xylose isomerase-like T 29.2 3.8E+02 0.013 25.4 14.0 37 126-162 163-207 (335)
280 1qnr_A Endo-1,4-B-D-mannanase; 29.1 3.6E+02 0.012 25.5 11.0 21 28-48 90-110 (344)
281 3a5f_A Dihydrodipicolinate syn 29.0 99 0.0034 29.8 6.8 39 121-160 52-91 (291)
282 3tr9_A Dihydropteroate synthas 29.0 4.2E+02 0.014 26.0 15.6 84 66-150 28-115 (314)
283 4dzh_A Amidohydrolase; adenosi 28.8 50 0.0017 33.6 4.8 36 251-286 209-244 (472)
284 4dyk_A Amidohydrolase; adenosi 28.6 52 0.0018 32.9 4.8 35 251-285 202-236 (451)
285 3h5d_A DHDPS, dihydrodipicolin 28.3 1.9E+02 0.0066 28.1 8.8 67 90-161 30-98 (311)
286 1f6k_A N-acetylneuraminate lya 28.2 1.3E+02 0.0044 29.0 7.4 39 121-160 55-94 (293)
287 2vun_A Enamidase; nicotinate d 28.1 33 0.0011 33.6 3.1 120 251-406 174-320 (386)
288 3ndz_A Endoglucanase D; cellot 27.6 1E+02 0.0035 30.3 6.7 45 102-150 265-309 (345)
289 3cqj_A L-ribulose-5-phosphate 27.5 3.1E+02 0.011 25.4 10.0 22 28-49 30-51 (295)
290 3daq_A DHDPS, dihydrodipicolin 27.5 1.4E+02 0.0048 28.7 7.5 40 121-161 53-93 (292)
291 4djd_D C/Fe-SP, corrinoid/iron 27.4 60 0.002 32.3 4.8 72 123-205 141-214 (323)
292 4drs_A Pyruvate kinase; glycol 27.1 26 0.0009 37.2 2.3 110 29-147 217-328 (526)
293 3f2b_A DNA-directed DNA polyme 26.9 46 0.0016 38.4 4.3 55 1-64 114-169 (1041)
294 3b40_A PVDM, probable dipeptid 26.7 3.1E+02 0.01 28.0 10.3 35 370-405 371-405 (417)
295 2qul_A D-tagatose 3-epimerase; 26.7 3.7E+02 0.013 24.5 17.8 134 28-163 17-177 (290)
296 2f46_A Hypothetical protein; s 26.5 33 0.0011 29.7 2.5 14 138-151 100-113 (156)
297 2hk0_A D-psicose 3-epimerase; 26.5 4E+02 0.014 24.9 14.9 40 123-162 147-194 (309)
298 2pz0_A Glycerophosphoryl diest 26.4 3.8E+02 0.013 24.6 11.1 56 127-186 100-162 (252)
299 2z00_A Dihydroorotase; zinc bi 26.2 34 0.0011 33.9 2.9 40 368-407 327-366 (426)
300 1jak_A Beta-N-acetylhexosamini 26.2 2.2E+02 0.0077 29.8 9.3 137 27-187 230-386 (512)
301 1vp8_A Hypothetical protein AF 26.0 1.3E+02 0.0045 27.7 6.4 50 29-80 31-80 (201)
302 3lmz_A Putative sugar isomeras 25.9 3.7E+02 0.013 24.3 11.9 111 28-160 30-153 (257)
303 3eb2_A Putative dihydrodipicol 25.9 1.4E+02 0.0047 29.0 7.1 40 121-161 55-95 (300)
304 3vnd_A TSA, tryptophan synthas 25.5 2E+02 0.0068 27.5 8.1 105 85-204 30-154 (267)
305 2wqp_A Polysialic acid capsule 25.4 1.5E+02 0.0052 29.6 7.4 23 32-54 39-61 (349)
306 3ib7_A ICC protein; metallopho 25.2 3.2E+02 0.011 25.5 9.7 104 29-147 52-182 (330)
307 3dx5_A Uncharacterized protein 24.7 4E+02 0.014 24.3 10.5 88 54-148 16-106 (286)
308 2r91_A 2-keto-3-deoxy-(6-phosp 24.6 2.3E+02 0.0079 27.0 8.5 26 247-272 105-130 (286)
309 3iar_A Adenosine deaminase; pu 23.8 4.3E+02 0.015 26.3 10.6 77 102-187 172-252 (367)
310 2hpi_A DNA polymerase III alph 23.7 97 0.0033 36.3 6.3 56 1-65 5-63 (1220)
311 2eja_A URO-D, UPD, uroporphyri 23.5 98 0.0033 30.2 5.6 55 125-185 215-271 (338)
312 1vjz_A Endoglucanase; TM1752, 23.5 1.9E+02 0.0065 27.8 7.8 45 102-150 264-308 (341)
313 3hcn_A Ferrochelatase, mitocho 23.4 5.6E+02 0.019 25.5 11.7 24 27-50 103-126 (359)
314 4erc_A Dual specificity protei 23.3 88 0.003 26.0 4.7 33 246-278 70-102 (150)
315 3q94_A Fructose-bisphosphate a 23.3 3E+02 0.01 26.7 8.9 22 246-267 116-137 (288)
316 2qul_A D-tagatose 3-epimerase; 23.3 4.3E+02 0.015 24.1 11.1 88 54-146 18-107 (290)
317 2bb0_A Imidazolonepropionase; 23.2 1.2E+02 0.0041 29.9 6.3 57 127-187 230-287 (421)
318 2hk0_A D-psicose 3-epimerase; 23.2 4E+02 0.014 24.9 9.9 58 88-147 66-127 (309)
319 3no3_A Glycerophosphodiester p 23.2 4.3E+02 0.015 24.1 10.9 30 255-284 187-216 (238)
320 2inf_A URO-D, UPD, uroporphyri 22.6 1.1E+02 0.0037 30.3 5.8 54 125-184 229-283 (359)
321 3v0d_A Voltage-sensor containi 22.6 2.7E+02 0.0092 27.5 8.7 29 244-272 173-207 (339)
322 3e96_A Dihydrodipicolinate syn 22.6 2.1E+02 0.0071 27.8 7.8 40 121-161 63-102 (316)
323 3pao_A Adenosine deaminase; st 22.3 2.4E+02 0.0083 27.6 8.2 126 50-211 143-281 (326)
324 2img_A Dual specificity protei 22.1 84 0.0029 26.1 4.3 31 247-277 72-102 (151)
325 3aof_A Endoglucanase; glycosyl 21.9 1.8E+02 0.006 27.6 7.0 44 102-149 246-289 (317)
326 1v77_A PH1877P, hypothetical p 21.8 64 0.0022 29.6 3.6 27 1-48 7-33 (212)
327 3inp_A D-ribulose-phosphate 3- 21.3 3E+02 0.01 25.9 8.4 58 3-78 88-145 (246)
328 3kws_A Putative sugar isomeras 21.0 4.8E+02 0.017 23.8 10.6 39 249-287 144-190 (287)
329 3ch0_A Glycerophosphodiester p 20.8 4.5E+02 0.015 24.3 9.6 57 126-186 114-186 (272)
330 3ks6_A Glycerophosphoryl diest 20.7 5E+02 0.017 23.9 13.5 56 128-187 87-151 (250)
331 1rvg_A Fructose-1,6-bisphospha 20.2 3.3E+02 0.011 26.6 8.5 94 127-267 28-129 (305)
332 3ovp_A Ribulose-phosphate 3-ep 20.2 80 0.0027 29.4 4.0 58 3-78 66-123 (228)
333 3rgo_A Protein-tyrosine phosph 20.1 1E+02 0.0036 25.8 4.5 35 245-279 70-104 (157)
334 3cqj_A L-ribulose-5-phosphate 20.0 5.1E+02 0.018 23.8 16.3 92 53-147 30-129 (295)
No 1
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=100.00 E-value=2.2e-68 Score=542.78 Aligned_cols=291 Identities=38% Similarity=0.642 Sum_probs=267.5
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCC-----CeEEEeecC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDE-----RLYSTVGCH 75 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~-----~v~~avGiH 75 (487)
|++||+||||+++.|.++|+| |.++..|+++|++||+++||.+++++|+++++|+++++++++|| ++|+++|+|
T Consensus 26 m~~iDtH~HL~~~~f~g~y~g-k~~h~~d~~~vl~rA~~aGV~~ii~~g~~~~~~~~~~~La~~~~~~~~~~v~~~~GiH 104 (325)
T 3ipw_A 26 QQFIDIGANLTDDNYFGNYHG-KHYHEEDIDVVLQRAERNGLSHIIITSGCLNDFKKAIEIINKYQNLTNIKLVTTIGVH 104 (325)
T ss_dssp CCEEEEEECTTSGGGGTEETT-EECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHGGGCSSEEEEEECCC
T ss_pred CCeEEEEECCCchHhcccccc-ccccccCHHHHHHHHHHcCCcEEEEccCCHHHHHHHHHHHHHCCCcccceEEEEEEEC
Confidence 789999999999999999998 67778999999999999999999999999999999999999999 899999999
Q ss_pred CCCCCCcCCCchh-hHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhh-CCCCEEEEecCchHH
Q psy4448 76 PTRCSEFENDPEG-YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVT-HKLPLFLHCRNAKSD 153 (487)
Q Consensus 76 P~~~~~~~~~~~~-~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~e-l~lPViIH~r~a~~d 153 (487)
||++.++. ++ +++.|++++..+.++++|||||||||++.+.++++.|+++|++||+||++ +++||+||+|+|+++
T Consensus 105 P~~~~~~~---~~~~l~~L~~l~~~~~~~vvAIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~~lPviiH~r~A~~d 181 (325)
T 3ipw_A 105 PTRTNELK---QEGYLDELLLLCEKNIDKVVAIGEIGLDYERLQFSDKETQLSGYRTLSILHQKYPYLPFFFHCRKSWSD 181 (325)
T ss_dssp GGGGGGGG---STTHHHHHHHHHHHTGGGEEEEEEEEEETTCCSSSCHHHHHHHHHHTHHHHHHCTTCCEEEEEESCHHH
T ss_pred cchhhcCC---chHHHHHHHHHHhcCCCCEEEEEeeecCCCcCCCCCHHHHHHHHHHHHHHHHHhhCCeEEEEeCchHHH
Confidence 99997663 22 68899999876435899999999999876667899999999999999999 999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhh
Q psy4448 154 FIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKE 233 (487)
Q Consensus 154 ~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~ 233 (487)
++++|+++.... .++|+|||||+.+++++++++
T Consensus 182 ~l~iL~~~~~~~-~~gViH~FsGs~e~a~~~l~l---------------------------------------------- 214 (325)
T 3ipw_A 182 LCQLNKELGYNG-CKGVVHCFDGTEEEMNQILNE---------------------------------------------- 214 (325)
T ss_dssp HHHHHHHTTCTT-SCEEECSCCCCHHHHHHHHHT----------------------------------------------
T ss_pred HHHHHHhcCCCC-CcEEEEECCCCHHHHHHHHhc----------------------------------------------
Confidence 999999986543 379999999999999999988
Q ss_pred ccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchh
Q psy4448 234 QWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKE 313 (487)
Q Consensus 234 ~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~ 313 (487)
|+|+||+| +++++.+
T Consensus 215 -----------------------------------------------------------G~yis~~G------~~~k~~~ 229 (325)
T 3ipw_A 215 -----------------------------------------------------------GWDIGVTG------NSLQSIE 229 (325)
T ss_dssp -----------------------------------------------------------TCEEEECS------GGGSSHH
T ss_pred -----------------------------------------------------------CcEEeeCc------cccCcHH
Confidence 45999999 6788888
Q ss_pred hHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHH
Q psy4448 314 NLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLG 393 (487)
Q Consensus 314 ~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va 393 (487)
.+++++.||+||||||||+||+.+.|.|++++||.+-.|..++++|..+.+++++|+|++|..|++.||+++|+++++|+
T Consensus 230 ~~~~v~~iPldrlLlETDaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~~iA~l~g~~~eeva 309 (325)
T 3ipw_A 230 LLNVMKQIPIERLHIETDCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIKHISLFEFV 309 (325)
T ss_dssp HHHHHTTSCGGGEEECCCTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHHHHHTCCHHHHH
T ss_pred HHHHHHhCCcccEEEeCCCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHHHHHHhhCcCHHHHH
Confidence 88999999999999999999999999999999998877766678888888889999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q psy4448 394 PIIHQNTLRLFFPH 407 (487)
Q Consensus 394 ~~~~~N~~rlf~~~ 407 (487)
+++++|+.+||++.
T Consensus 310 ~~t~~Na~~lF~~~ 323 (325)
T 3ipw_A 310 NKVYSNSMNMYFPT 323 (325)
T ss_dssp HHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHhCcC
Confidence 99999999999875
No 2
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.6e-65 Score=528.36 Aligned_cols=297 Identities=38% Similarity=0.652 Sum_probs=254.8
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCC-----eEEEeecC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDER-----LYSTVGCH 75 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~-----v~~avGiH 75 (487)
|++||+||||++..|.+.|+| ++.+..|+++||+||+++||.++|++|+++++|+++++++++||+ +|+++|||
T Consensus 12 ~~~iDih~nL~d~~f~g~y~~-~~~h~~D~~~vl~rA~~~GV~~ii~~g~~l~~s~~~~~La~~~~~~~~~~l~~tvGvH 90 (401)
T 3e2v_A 12 LKYYDIGLNLTDPMFHGIYNG-KQYHPADYVKLLERAAQRHVKNALVTGSSIAESQSAIELVSSVKDLSPLKLYHTIGVH 90 (401)
T ss_dssp CCEEEEEECTTSGGGGTEETT-EECSCCCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHTTTCSSEEEEEECCC
T ss_pred CCeEEEEeCcCcHHHhhhccc-cccCccCHHHHHHHHHHCCCCEEEEecCCHHHHHHHHHHHHHCCCccccceEEEEEEC
Confidence 689999999999999999998 667789999999999999999999999999999999999999987 59999999
Q ss_pred CCCCCCcCCCc---------------------------------hhhHHHHHHHHHh----cCCCEEEEEeeCCCCCCCC
Q psy4448 76 PTRCSEFENDP---------------------------------EGYLQSLDKIIKE----GGKKVVAFGEFGLDYDRVQ 118 (487)
Q Consensus 76 P~~~~~~~~~~---------------------------------~~~l~~L~~ll~~----~~~~vvaIGEIGLD~~~~~ 118 (487)
|+++.++.... .+.++.|++++.+ ..++++|||||||||++..
T Consensus 91 P~~~~e~~~~~~~~~~~~~~~~p~~d~~~~~~l~~~~~~~~~~~~~~l~~L~~l~~~~~~~~~~~vvAIGEiGLDy~~~~ 170 (401)
T 3e2v_A 91 PCCVNEFADASQGDKASASIDNPSMDEAYNESLYAKVISNPSFAQGKLKELYDLMNQQAKPHDTSFRSIGEIGLDYDRFH 170 (401)
T ss_dssp GGGGGGGC------------------CHHHHHHHHHHHHCTHHHHHHHHHHHHHHHHHHCSTTCSEEEEEEEEEETTCTT
T ss_pred cChhhhcccccccccccccccccccccccccccccccccccccchHHHHHHHHHHHhhhhccCCcEEEEEEEeCCCCcCC
Confidence 99987663211 0136777777753 2378999999999998855
Q ss_pred CCChHHHHHHHHHHHHHhhhC----CCCEEEEecCchHHHHHHHHHhCCC-------------------------CCCcE
Q psy4448 119 YCPVETQLKYFRKQLDLSVTH----KLPLFLHCRNAKSDFIEIMKEYAPK-------------------------LPRKG 169 (487)
Q Consensus 119 ~~~~e~Q~~vF~~qL~LA~el----~lPViIH~r~a~~d~l~iLk~~~~~-------------------------~~~~~ 169 (487)
.++++.|+++|++||+||+++ ++||+||+|+|++++++||+++... ...++
T Consensus 171 ~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (401)
T 3e2v_A 171 YSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLGASSSSGFYKFHPDRKL 250 (401)
T ss_dssp TSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESCHHHHHHHHHHHHHCEECSSCTTCGGGC--CCTTCEECCCTTCCE
T ss_pred CCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecchHHHHHHHHHHhhccccccccccccccccccccccccccCCCCcE
Confidence 678999999999999999999 9999999999999999999986321 01369
Q ss_pred EEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhh
Q psy4448 170 VIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPAN 249 (487)
Q Consensus 170 v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q 249 (487)
|+|||||+.+++++++++ |
T Consensus 251 V~H~FsGs~e~a~~~l~l--G----------------------------------------------------------- 269 (401)
T 3e2v_A 251 VVHSFTGSAIDLQKLLNL--S----------------------------------------------------------- 269 (401)
T ss_dssp EECSCCCCHHHHHHHHHH--C-----------------------------------------------------------
T ss_pred EEEcCCCCHHHHHHHHhC--C-----------------------------------------------------------
Confidence 999999999999999988 2
Q ss_pred HHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhhhCCCCceEec
Q psy4448 250 IVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLE 329 (487)
Q Consensus 250 ~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iPldrlLlE 329 (487)
.++|+|||| +++++++.+++++.||+||||||
T Consensus 270 ------------------------------------------~~~yis~~g------~~~k~~~~~e~v~~iPldrLLlE 301 (401)
T 3e2v_A 270 ------------------------------------------PNIFIGVNG------CSLRTEENLAVVKQIPTERLLLE 301 (401)
T ss_dssp ------------------------------------------TTEEEEECG------GGGSSHHHHHHHHTSCGGGEEEC
T ss_pred ------------------------------------------CCEEEEeCC------EecCCHHHHHHHHhCCchhEEEe
Confidence 136999999 68888888899999999999999
Q ss_pred cCCCCCCCCCCCcchhhHhhhh----------hhhhhhccCC------ccCCCCCCccccHHHHHHHHHHhhCCCHHHHH
Q psy4448 330 TDCPWCEVKPSHAGFAYIRTQH----------EKVKKEQWKP------DKMVKSRNEPANIVQILEIVAAVRGVEREKLG 393 (487)
Q Consensus 330 TD~P~~~~~p~~~~~~~l~~~~----------~~~~~~~~~~------~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va 393 (487)
||+|||.++++|+|++||.... ..+++++|.. ..++++||+|++|..|++.||++||+++++|+
T Consensus 302 TDaP~~~i~~~h~~~~yL~p~p~~~~~~~~p~r~~kk~k~~~~~~~~~~~~~~~rNEP~~v~~Va~~iA~lkg~~~eeva 381 (401)
T 3e2v_A 302 TDAPWCEIKRTHASFQYLAKYQEVRDFEYPAFKSVKKNKLADKLNAEELYMVKGRNEPCNMEQVAIVVSEVKDVDLATLI 381 (401)
T ss_dssp CCTTSCCCCTTSTTHHHHHHHHHHSCCCSSSSEEECGGGSGGGTTSSSCEEETTCCCGGGHHHHHHHHHHHHTCCHHHHH
T ss_pred cCCCCcccccccccccccCCCcccccccccccccchhhhccccccccccccCCCCccHHHHHHHHHHHHHHHCcCHHHHH
Confidence 9999999999999999998642 1224444431 12346899999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q psy4448 394 PIIHQNTLRLFFPH 407 (487)
Q Consensus 394 ~~~~~N~~rlf~~~ 407 (487)
++|++|+.+||+-+
T Consensus 382 ~~t~~Na~~lf~~~ 395 (401)
T 3e2v_A 382 DTTWKTTCKIFGEG 395 (401)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHhCc
Confidence 99999999999865
No 3
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=100.00 E-value=4.4e-59 Score=467.86 Aligned_cols=259 Identities=31% Similarity=0.484 Sum_probs=232.3
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCC----eEEEeecCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDER----LYSTVGCHP 76 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~----v~~avGiHP 76 (487)
|++||+||||++..| ..|+++|+++|+++||.+++++|+++++|++++++++++|+ +++++|+||
T Consensus 1 M~~iD~H~HL~~~~~-----------~~d~~~vl~~a~~~gV~~~v~~g~~~~~~~~~~~la~~~~~~~~~v~~~~GiHP 69 (287)
T 3rcm_A 1 MQLIDIGVNLTNSSF-----------HDQQAAIVERALEAGVTQMLLTGTSLAVSEQALELCQQLDASGAHLFATAGVHP 69 (287)
T ss_dssp CCEEEEEECTTCGGG-----------TTCHHHHHHHHHHTTEEEEEECCCSHHHHHHHHHHHHHHCTTSSSEEEEECCCG
T ss_pred CceEEEeecCCchhc-----------ccCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHhCCCCCceEEEEEEECc
Confidence 899999999999888 68999999999999999999999999999999999999998 999999999
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHH
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIE 156 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~ 156 (487)
|++.+.. ++.++.|++++.. ++++|||||||||++ +.++.+.|+++|++||++|+++++||+||+|+|.+++++
T Consensus 70 ~~~~~~~---~~~~~~l~~l~~~--~~vvaIGEiGLD~~~-~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~~~~l~ 143 (287)
T 3rcm_A 70 HDAKAWD---TDSERQLRLLLSE--PRVRAVGECGLDFNR-DFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLA 143 (287)
T ss_dssp GGGGGCC---TTHHHHHHHHHTS--TTEEEEEEEEEETTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHH
T ss_pred CccccCC---HHHHHHHHHHhcC--CCeEEEEEeeeCCCc-ccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcHHHHHH
Confidence 9987653 3567889998876 789999999999988 667899999999999999999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccC
Q psy4448 157 IMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWK 236 (487)
Q Consensus 157 iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (487)
+|++++... .++|+|||+|+.+++++++++
T Consensus 144 il~~~~~~~-~~~V~H~fsG~~e~a~~~l~~------------------------------------------------- 173 (287)
T 3rcm_A 144 ILKDYRDHL-TGAVVHCFTGEREALFAYLDL------------------------------------------------- 173 (287)
T ss_dssp HHHTTGGGC-SCEEECSCCCCHHHHHHHHHT-------------------------------------------------
T ss_pred HHHHcCCCC-CeEEEEeCCCCHHHHHHHHHC-------------------------------------------------
Confidence 999886432 368999999999999999887
Q ss_pred CccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccc-cc-hhh
Q psy4448 237 PDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL-KT-KEN 314 (487)
Q Consensus 237 ~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~-k~-~~~ 314 (487)
|+|+||+|. +++ ++ .+.
T Consensus 174 --------------------------------------------------------G~yis~~g~-----i~~~k~~~~l 192 (287)
T 3rcm_A 174 --------------------------------------------------------DLHIGITGW-----ICDERRGTHL 192 (287)
T ss_dssp --------------------------------------------------------TCEEEECGG-----GGCTTTCGGG
T ss_pred --------------------------------------------------------CcEEEECch-----hccccCHHHH
Confidence 469999994 555 44 455
Q ss_pred HHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHH
Q psy4448 315 LETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGP 394 (487)
Q Consensus 315 ~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~ 394 (487)
+++++.+|+||||+|||+||+.|.|.. .+.+|++|+|++|..|++.+|+++|++.+++++
T Consensus 193 ~~~v~~ip~drlLlETD~P~l~p~~~~--------------------~~~rg~~n~P~~l~~v~~~lA~~~g~s~eev~~ 252 (287)
T 3rcm_A 193 HPLVGNIPEGRLMLESDAPYLLPRSLR--------------------PKPKSGRNEPAFLPEVLREVALHRGESAEHTAA 252 (287)
T ss_dssp HHHHTTSCTTSEEECCCTTSCCCTTCS--------------------SCCTTCCCCGGGHHHHHHHHHHHHTSCHHHHHH
T ss_pred HHHHHhcCCccEEEeccCCccCccccc--------------------cccCCCcCCHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 699999999999999999998876531 112588999999999999999999999999999
Q ss_pred HHHHHHHHhcCCC
Q psy4448 395 IIHQNTLRLFFPH 407 (487)
Q Consensus 395 ~~~~N~~rlf~~~ 407 (487)
++++|+.+||++.
T Consensus 253 ~~~~N~~rlf~l~ 265 (287)
T 3rcm_A 253 HTTATARDFFQLP 265 (287)
T ss_dssp HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHCCC
Confidence 9999999999886
No 4
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=100.00 E-value=7.7e-58 Score=451.07 Aligned_cols=247 Identities=22% Similarity=0.291 Sum_probs=214.7
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
|++||+||||+. ..|+++|+++|+++||..++ +|+++++|+++++++++||++|+++|+|||++.
T Consensus 1 m~liDtH~HL~~--------------~~d~~~vl~~a~~~gV~~i~-v~~~~~~~~~~~~la~~~~~v~~~~GiHP~~~~ 65 (254)
T 3gg7_A 1 MSLIDFHVHLDL--------------YPDPVAVARACEERQLTVLS-VTTTPAAWRGTLALAAGRPHVWTALGFHPEVVS 65 (254)
T ss_dssp -CCEEEEECGGG--------------SSSHHHHHHHHHHTTCEEEE-CCSSGGGHHHHHGGGTTCTTEEECBCCCGGGTT
T ss_pred CceEEEeeCCCC--------------CCCHHHHHHHHHHCCCcEEE-ecCCHHHHHHHHHHHHhCCCeEEEEeeCccccc
Confidence 899999999984 35899999999999998755 699999999999999999999999999999986
Q ss_pred CcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEE-EEecCchHHHHHHHH
Q psy4448 81 EFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLF-LHCRNAKSDFIEIMK 159 (487)
Q Consensus 81 ~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPVi-IH~r~a~~d~l~iLk 159 (487)
.. .++++.|++++. +++|||||||||++...++++.|+++|++||+||+++++||+ ||+|+|.++++++|+
T Consensus 66 ~~----~~~l~~l~~~~~----~~vaIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~~~~~~il~ 137 (254)
T 3gg7_A 66 ER----AADLPWFDRYLP----ETRFVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLE 137 (254)
T ss_dssp TT----GGGTHHHHHHGG----GCSEEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHH
T ss_pred cc----HHHHHHHHHHhh----hccEEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHH
Confidence 54 255778888873 479999999999872236789999999999999999999998 999999999999999
Q ss_pred HhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCcc
Q psy4448 160 EYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDK 239 (487)
Q Consensus 160 ~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (487)
+++.. .++|+|||+|+.+++++++++
T Consensus 138 ~~~~~--~~~v~H~fsG~~e~a~~~l~~---------------------------------------------------- 163 (254)
T 3gg7_A 138 ANPRS--GTPILHWYSGSVTELRRAISL---------------------------------------------------- 163 (254)
T ss_dssp HCGGG--EEEEEETCCSCHHHHHHHHHT----------------------------------------------------
T ss_pred HcCCC--CcEEEEeCCCCHHHHHHHHcC----------------------------------------------------
Confidence 98431 256999999999999999887
Q ss_pred ccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhh
Q psy4448 240 MVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVK 319 (487)
Q Consensus 240 ~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~ 319 (487)
|+|+||+|. ++ ++.+.+++++
T Consensus 164 -----------------------------------------------------G~yis~~g~-----~~-~~~~~~~~v~ 184 (254)
T 3gg7_A 164 -----------------------------------------------------GCWFSVGPT-----MV-RTQKGAALIR 184 (254)
T ss_dssp -----------------------------------------------------TCEEEECHH-----HH-TSHHHHHHHH
T ss_pred -----------------------------------------------------CcEEEECcc-----cC-chHHHHHHHH
Confidence 459999993 33 6666779999
Q ss_pred hCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHH
Q psy4448 320 SIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQN 399 (487)
Q Consensus 320 ~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N 399 (487)
.+|+||||+|||+||+. . +|++|+|++|..|++.||+++|++.+++++++++|
T Consensus 185 ~ip~drlLlETD~P~~~---~------------------------rg~~n~P~~v~~v~~~iA~~~g~~~ee~~~~~~~N 237 (254)
T 3gg7_A 185 SMPRDRVLTETDGPFLE---L------------------------DGQAALPWDVKSVVEGLSKIWQIPASEVERIVKEN 237 (254)
T ss_dssp HSCGGGEEECCCTTTSE---E------------------------TTEECCGGGHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HcCCCeEEEeCCCCccc---c------------------------CCCCCCHHHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 99999999999999952 1 37899999999999999999999999999999999
Q ss_pred HHHhcCCCCCC
Q psy4448 400 TLRLFFPHELP 410 (487)
Q Consensus 400 ~~rlf~~~~~~ 410 (487)
+.+||+++.+.
T Consensus 238 ~~~lf~~~~~~ 248 (254)
T 3gg7_A 238 VSRLLGTVREG 248 (254)
T ss_dssp HHHHHHC----
T ss_pred HHHHHCCCccc
Confidence 99999987554
No 5
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=100.00 E-value=5.5e-56 Score=447.25 Aligned_cols=293 Identities=49% Similarity=0.880 Sum_probs=248.5
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
||+||+|||++++.|.+.|.+ +..+..++++++++|+++||..++++|+++++|++++++++++|++++++|+|||++.
T Consensus 1 ~~~iD~H~Hl~~~~~~~~~~~-~~~h~~d~~~vl~~~~~~GV~~~v~~~~~~~~~~~~~~la~~~~~v~~~~GiHP~~~~ 79 (301)
T 2xio_A 1 MKFIDIGINLTDPMFRGIYRG-VQKHQDDLQDVIGRAVEIGVKKFMITGGNLQDSKDALHLAQTNGMFFSTVGCHPTRCG 79 (301)
T ss_dssp CCEEEEEECTTCGGGGTEETT-EECSCCCHHHHHHHHHHHTEEEEEECCCSHHHHHHHHHHHTTCTTEEEEECCCGGGTH
T ss_pred CeEEEEcCCCCChHhcccccc-cccCccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCEEEEEEECcChhh
Confidence 899999999999888665655 3444579999999999999999999999999999999999999999999999999875
Q ss_pred CcCC-CchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHH
Q psy4448 81 EFEN-DPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMK 159 (487)
Q Consensus 81 ~~~~-~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk 159 (487)
++.. +.+..+++|++++.++.++++|||||||||++...++.+.|+++|++|+++|+++++||+||+|+++++++++|+
T Consensus 80 ~~~~~~~~~~~~~l~~~~~~~~~~~~aIGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a~~~~~~il~ 159 (301)
T 2xio_A 80 EFEKNNPDLYLKELLNLAENNKGKVVAIGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDITK 159 (301)
T ss_dssp HHHHHCHHHHHHHHHHHHHTCTTTEEEEEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESCHHHHHHHHH
T ss_pred hCcccccHHHHHHHHHHHhcCCCCeEEEEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCchHHHHHHHH
Confidence 4310 012457888998876445899999999999875456789999999999999999999999999999999999999
Q ss_pred HhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCcc
Q psy4448 160 EYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDK 239 (487)
Q Consensus 160 ~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (487)
+++... .++|+|||+|+.+++++++++
T Consensus 160 ~~~~~~-~~~i~H~f~g~~~~~~~~l~~---------------------------------------------------- 186 (301)
T 2xio_A 160 RNRDRC-VGGVVHSFDGTKEAAAALIDL---------------------------------------------------- 186 (301)
T ss_dssp HTGGGS-SCEEETTCCCCHHHHHHHHHT----------------------------------------------------
T ss_pred hccCCC-CcEEEEccCCCHHHHHHHHhc----------------------------------------------------
Confidence 875322 368999999999999998876
Q ss_pred ccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhh
Q psy4448 240 MVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVK 319 (487)
Q Consensus 240 ~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~ 319 (487)
|+|+||+| +++++.+.+++++
T Consensus 187 -----------------------------------------------------g~yi~~~g------~~~~~~~~~~~~~ 207 (301)
T 2xio_A 187 -----------------------------------------------------DLYIGFNG------CSLKTEANLEVLK 207 (301)
T ss_dssp -----------------------------------------------------TCEEEECG------GGSSSHHHHHHHH
T ss_pred -----------------------------------------------------CcEEEEcc------cccCChHHHHHHH
Confidence 46999999 5677777779999
Q ss_pred hCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHH
Q psy4448 320 SIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQN 399 (487)
Q Consensus 320 ~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N 399 (487)
.+|+||||+|||+||+.+.|+|++++||.+.+|. + +++..++..+++|+|++|..+++.+|+++|++.+++++++++|
T Consensus 208 ~~p~drlLleTD~P~~~~~~~~~~~~~l~~~~p~-~-~~~~~g~~~~~~n~p~~v~~~~~~ia~l~g~~~e~~~~~~~~N 285 (301)
T 2xio_A 208 SIPSEKLMIETDAPWCGVKSTHAGSKYIRTAFPT-K-KKWESGHCLKDRNEPCHIIQILEIMSAVRDEDPLELANTLYNN 285 (301)
T ss_dssp TSCGGGEEECCCTTSCCCCTTSTTGGGCCCCCCE-E-SSCCTTSEETTCCCGGGHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hCChHHEEEecCCCcccccccccccccccccCcc-c-ccccccccCCCCCChHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 9999999999999999999999999988755442 1 1122222235689999999999999999999999999999999
Q ss_pred HHHhcCCCC
Q psy4448 400 TLRLFFPHE 408 (487)
Q Consensus 400 ~~rlf~~~~ 408 (487)
+.|||++..
T Consensus 286 a~rlf~~~~ 294 (301)
T 2xio_A 286 TIKVFFPVI 294 (301)
T ss_dssp HHHHHCCC-
T ss_pred HHHHhCchh
Confidence 999998764
No 6
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=100.00 E-value=7.9e-50 Score=391.53 Aligned_cols=256 Identities=27% Similarity=0.392 Sum_probs=225.6
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
|++||+|||++...| ..+.++++++++++||+.++++|+++++|+.+.++++++|++++++|+|||++.
T Consensus 3 m~~iD~H~Hl~~~~~-----------~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~G~hP~~~~ 71 (259)
T 1zzm_A 3 CRFIDTHCHFDFPPF-----------SGDEEASLQRAAQAGVGKIIVPATEAENFARVLALAENYQPLYAALGLHPGMLE 71 (259)
T ss_dssp CCEEESCBCTTSTTT-----------TTCHHHHHHHHHHTTEEEEEEECCSGGGHHHHHHHHHHCTTEEEEECCCGGGGG
T ss_pred ceEEEeeecCCchhh-----------ccCHHHHHHHHHHcCCCEEEEecCCHHHHHHHHHHHHhCCCeEEEEEecccccc
Confidence 779999999998766 578999999999999999999999999999999999999999999999999876
Q ss_pred CcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHH
Q psy4448 81 EFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 160 (487)
Q Consensus 81 ~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~ 160 (487)
... +..+++|++++..+.+++++||||||||++ ...+.+.|.++|+.|+++|.++++||+||+|++.++++++|++
T Consensus 72 ~~~---~~~~~~l~~~~~~~~~~~~~iGEiGld~~~-~~~~~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~~~~il~~ 147 (259)
T 1zzm_A 72 KHS---DVSLEQLQQALERRPAKVVAVGEIGLDLFG-DDPQFERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKR 147 (259)
T ss_dssp GCC---HHHHHHHHHHHHHCCSSEEEEEEEEEECCS-SCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHH
T ss_pred cCC---HHHHHHHHHHHhcCCCCEEEEEEeccCCCC-CCCCHHHHHHHHHHHHHHHHHhCCcEEEEecccHHHHHHHHHh
Confidence 542 355788888887644689999999999977 5566899999999999999999999999999999999999999
Q ss_pred hCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccc
Q psy4448 161 YAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKM 240 (487)
Q Consensus 161 ~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (487)
++.. .++|+|||+|+.+.++++++.
T Consensus 148 ~~~~--~~~i~H~~~g~~~~~~~~~~~----------------------------------------------------- 172 (259)
T 1zzm_A 148 HDLP--RTGVVHGFSGSLQQAERFVQL----------------------------------------------------- 172 (259)
T ss_dssp HCCT--TCEEETTCCSCHHHHHHHHHT-----------------------------------------------------
T ss_pred cCCC--CCEEEEcCCCCHHHHHHHHHC-----------------------------------------------------
Confidence 8642 378999999999998888776
Q ss_pred cCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccch-hhHHHhh
Q psy4448 241 VKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK-ENLETVK 319 (487)
Q Consensus 241 ~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~-~~~e~v~ 319 (487)
|+|+||+|. .++++. ..+++++
T Consensus 173 ----------------------------------------------------g~~i~~~g~-----~~~~~~~~~~~~~~ 195 (259)
T 1zzm_A 173 ----------------------------------------------------GYKIGVGGT-----ITYPRASKTRDVIA 195 (259)
T ss_dssp ----------------------------------------------------TCEEEECGG-----GGCTTTCSHHHHHH
T ss_pred ----------------------------------------------------CCEEEECce-----eeccccHHHHHHHH
Confidence 469999984 455543 3468999
Q ss_pred hCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHH
Q psy4448 320 SIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQN 399 (487)
Q Consensus 320 ~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N 399 (487)
.+|+||||+|||+||+.+.|. ++++|+|.+|..+++.+|+++|++.+++++++++|
T Consensus 196 ~~~~dril~eTD~P~~~p~~~------------------------~g~~~~p~~l~~~~~~la~~~g~~~e~~~~~~~~N 251 (259)
T 1zzm_A 196 KLPLASLLLETDAPDMPLNGF------------------------QGQPNRPEQAARVFAVLCELRREPADEIAQALLNN 251 (259)
T ss_dssp HSCGGGEEECCCBTSSCCTTC------------------------TTSCCCGGGHHHHHHHHHHHCSSCHHHHHHHHHHH
T ss_pred hCCHHHEEEecCCCCccCCCC------------------------CCCCCcHHHHHHHHHHHHHHHCcCHHHHHHHHHHH
Confidence 999999999999999876553 47899999999999999999999999999999999
Q ss_pred HHHhcCCC
Q psy4448 400 TLRLFFPH 407 (487)
Q Consensus 400 ~~rlf~~~ 407 (487)
+.|||+++
T Consensus 252 a~rl~~l~ 259 (259)
T 1zzm_A 252 TYTLFNVP 259 (259)
T ss_dssp HHHHHCCC
T ss_pred HHHHhCcC
Confidence 99999873
No 7
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=100.00 E-value=1.3e-49 Score=390.95 Aligned_cols=256 Identities=31% Similarity=0.534 Sum_probs=223.5
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
|++||+|||+++..| ..++++++++++++||+.+|++++++.++++++++++++|++++++|+||+.+.
T Consensus 3 m~~iD~H~Hl~~~~~-----------~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~i~~~~G~hP~~~~ 71 (264)
T 1xwy_A 3 YRMFDIGVNLTSSQF-----------AKDRDDVVACAFDAGVNGLLITGTNLRESQQAQKLARQYSSCWSTAGVHPHDSS 71 (264)
T ss_dssp --CEEEEECTTSGGG-----------TTTHHHHHHHHHHTTCCEEEECCCSHHHHHHHHHHHHHSTTEEEEECCCGGGGG
T ss_pred CcEEEEeeCCCChhh-----------ccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEEEECCcccc
Confidence 679999999998776 578999999999999999999999999999999999999999999999999886
Q ss_pred CcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHH
Q psy4448 81 EFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 160 (487)
Q Consensus 81 ~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~ 160 (487)
++. ++.++.|++++.. ++++|||||||||++ ...+.+.|+++|++|+++|.++++||+||+|++.++++++|++
T Consensus 72 ~~~---~~~~~~l~~~~~~--~~~~~iGE~Gld~~~-~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a~~~~~~il~~ 145 (264)
T 1xwy_A 72 QWQ---AATEEAIIELAAQ--PEVVAIGECGLDFNR-NFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEP 145 (264)
T ss_dssp GCC---HHHHHHHHHHHTS--TTEEEEEEEEEETTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHGG
T ss_pred cCC---HHHHHHHHHHhcC--CCeEEEEEeccCCCC-CCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCchHHHHHHHHh
Confidence 542 3457888988875 689999999999987 5567899999999999999999999999999999999999998
Q ss_pred hCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccc
Q psy4448 161 YAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKM 240 (487)
Q Consensus 161 ~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (487)
++... .++|+|||+|+.+.+++++++
T Consensus 146 ~~~~~-~~~v~H~~~g~~~~~~~~~~~----------------------------------------------------- 171 (264)
T 1xwy_A 146 WLDKL-PGAVLHCFTGTREEMQACVAH----------------------------------------------------- 171 (264)
T ss_dssp GGGGS-SCEEECSCCCCHHHHHHHHHT-----------------------------------------------------
T ss_pred cCCCC-CcEEEEccCCCHHHHHHHHHC-----------------------------------------------------
Confidence 86322 478999999999999888776
Q ss_pred cCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCccccccc-ccchhh-HHHh
Q psy4448 241 VKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDS-LKTKEN-LETV 318 (487)
Q Consensus 241 ~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~-~k~~~~-~e~v 318 (487)
|+|+||+|. .+ +++.+. ++++
T Consensus 172 ----------------------------------------------------g~yi~~~g~-----~~~~~~~~~l~~~~ 194 (264)
T 1xwy_A 172 ----------------------------------------------------GIYIGITGW-----VCDERRGLELRELL 194 (264)
T ss_dssp ----------------------------------------------------TCEEEECGG-----GGCTTTSHHHHHHG
T ss_pred ----------------------------------------------------CeEEEECcc-----ccCCcCcHHHHHHH
Confidence 469999994 45 554444 4899
Q ss_pred hhCCCCceEeccCCCCCCCC---CCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHH
Q psy4448 319 KSIPEDRLLLETDCPWCEVK---PSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPI 395 (487)
Q Consensus 319 ~~iPldrlLlETD~P~~~~~---p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~ 395 (487)
+.+|+||||+|||+||+.+. |. .+|++|+|.++..+++.+|+++|++.+++.++
T Consensus 195 ~~~~~drll~eTD~P~~~~~~~~~~-----------------------~~g~~n~p~~~~~~~~~~a~~~g~~~e~~~~~ 251 (264)
T 1xwy_A 195 PLIPAEKLLIETDAPYLLPRDLTPK-----------------------PSSRRNEPAHLPHILQRIAHWRGEDAAWLAAT 251 (264)
T ss_dssp GGSCGGGEEECCCTTSCCCTTCTTC-----------------------CCSSCCCGGGHHHHHHHHHHHHTCCHHHHHHH
T ss_pred HhCCHHHEEEecCCCCcCccccccc-----------------------cCCCCCchHHHHHHHHHHHHHHCcCHHHHHHH
Confidence 99999999999999997654 31 24889999999999999999999999999999
Q ss_pred HHHHHHHhcCCC
Q psy4448 396 IHQNTLRLFFPH 407 (487)
Q Consensus 396 ~~~N~~rlf~~~ 407 (487)
+++|+.|+|++.
T Consensus 252 ~~~Na~rl~~l~ 263 (264)
T 1xwy_A 252 TDANVKTLFGIA 263 (264)
T ss_dssp HHHHHHHHHCCC
T ss_pred HHHHHHHHhCcc
Confidence 999999999875
No 8
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.7e-47 Score=377.85 Aligned_cols=256 Identities=25% Similarity=0.382 Sum_probs=216.2
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCC-CeEEEeecCCCC-
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDE-RLYSTVGCHPTR- 78 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~-~v~~avGiHP~~- 78 (487)
|++||+|||++...| ..++++++++++++||+.+|++++++++|+.++++++++| ++++++|+|||+
T Consensus 4 m~~iD~H~Hl~~~~~-----------~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~l~~~~~~~i~~~~GihP~~~ 72 (272)
T 2y1h_A 4 VGLVDCHCHLSAPDF-----------DRDLDDVLEKAKKANVVALVAVAEHSGEFEKIMQLSERYNGFVLPCLGVHPVQG 72 (272)
T ss_dssp CCEEEEEECTTSGGG-----------TTTHHHHHHHHHHTTEEEEEECCSSGGGHHHHHHHHHHTTTTEEEEECCCSBC-
T ss_pred CcEEEEeeCCCchhh-----------hcCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCCEEEEEEECCCcc
Confidence 679999999998877 5799999999999999999999999999999999999999 599999999998
Q ss_pred CCCcCC--CchhhHHHHHHHHHhcCCCEEEEEeeCCCCC--CCCC-CChHHHHHHHHHHHHHhhhCCCCEEEEecCchHH
Q psy4448 79 CSEFEN--DPEGYLQSLDKIIKEGGKKVVAFGEFGLDYD--RVQY-CPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSD 153 (487)
Q Consensus 79 ~~~~~~--~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~--~~~~-~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d 153 (487)
+..... ...+.++.|++++.++.++++|||||||||+ +... .+.+.|+++|++|+++|+++++||+||+|++.++
T Consensus 73 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iGE~Gld~~~~~~~~~~~~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~ 152 (272)
T 2y1h_A 73 LPPEDQRSVTLKDLDVALPIIENYKDRLLAIGEVGLDFSPRFAGTGEQKEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRP 152 (272)
T ss_dssp ------CBCCHHHHHHHHHHHHHHGGGCSEEEEEECCCCTTTCCSHHHHHHHHHHHHHHHHHHHHHTCCEEEECTTCHHH
T ss_pred ccccccccCCHHHHHHHHHHHHhCCCCEEEEEeccCCCccccCCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHH
Confidence 543100 0134577888888753357999999999984 3111 2368899999999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhh
Q psy4448 154 FIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKE 233 (487)
Q Consensus 154 ~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~ 233 (487)
++++|++++. .++|+|||+|+.+.+++++++
T Consensus 153 ~~~il~~~~~---~~~v~H~~~g~~~~~~~~~~~---------------------------------------------- 183 (272)
T 2y1h_A 153 TINLLQEQGA---EKVLLHAFDGRPSVAMEGVRA---------------------------------------------- 183 (272)
T ss_dssp HHHHHHHTTC---CSEEEETCCSCHHHHHHHHHT----------------------------------------------
T ss_pred HHHHHHhCCC---CCEEEEccCCCHHHHHHHHHC----------------------------------------------
Confidence 9999999863 378999999999999888876
Q ss_pred ccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchh
Q psy4448 234 QWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKE 313 (487)
Q Consensus 234 ~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~ 313 (487)
|+|++|+|. .+ ....
T Consensus 184 -----------------------------------------------------------g~~i~~~g~-----~~-~~~~ 198 (272)
T 2y1h_A 184 -----------------------------------------------------------GYFFSIPPS-----II-RSGQ 198 (272)
T ss_dssp -----------------------------------------------------------TCEEEECGG-----GG-TCHH
T ss_pred -----------------------------------------------------------CCEEEECCc-----cc-CcHH
Confidence 569999994 22 3345
Q ss_pred hHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHH
Q psy4448 314 NLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLG 393 (487)
Q Consensus 314 ~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va 393 (487)
.+++++.+|+||||+|||+||+.+. ++++|+|.++..+++.+|+++|++.+++.
T Consensus 199 ~~~~~~~~~~drll~eTD~P~~~p~--------------------------~g~~~~p~~l~~~~~~la~~~g~~~e~~~ 252 (272)
T 2y1h_A 199 KQKLVKQLPLTSICLETDSPALGPE--------------------------KQVRNEPWNISISAEYIAQVKGISVEEVI 252 (272)
T ss_dssp HHHHHHHSCGGGEEECCCTTSSCSS--------------------------TTSCCCGGGHHHHHHHHHHHHTSCHHHHH
T ss_pred HHHHHHhCCHHHEEEecCCCCCCCC--------------------------CCCcCcHHHHHHHHHHHHHHHCcCHHHHH
Confidence 6689999999999999999996432 36789999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC
Q psy4448 394 PIIHQNTLRLFFPH 407 (487)
Q Consensus 394 ~~~~~N~~rlf~~~ 407 (487)
+++++|+.++|++.
T Consensus 253 ~~~~~N~~~l~~~~ 266 (272)
T 2y1h_A 253 EVTTQNALKLFPKL 266 (272)
T ss_dssp HHHHHHHHHHSTTH
T ss_pred HHHHHHHHHHHHhH
Confidence 99999999999874
No 9
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=100.00 E-value=1.6e-46 Score=371.50 Aligned_cols=254 Identities=31% Similarity=0.520 Sum_probs=223.1
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCCC
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSE 81 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~~ 81 (487)
.++|+||||++..| ..++++++++|+++||.++|++++++.+++.++++++++|++++++|+||+++..
T Consensus 12 ~~~~~~~hl~~~~~-----------~~~~~~~l~~~~~~GV~~~v~~~~~~~~~~~~~~l~~~~p~i~~~~G~hP~~~~~ 80 (268)
T 1j6o_A 12 HMVDTHAHLHFHQF-----------DDDRNAVISSFEENNIEFVVNVGVNLEDSKKSLDLSKTSDRIFCSVGVHPHDAKE 80 (268)
T ss_dssp CEEEEEECTTSGGG-----------TTTHHHHHHTTTTTTEEEEEEECSSHHHHHHHHHHHTTCTTEEEEECCCGGGGGG
T ss_pred cccccccCCCChhh-----------ccCHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHHCCCEEEEEeeccccccc
Confidence 38999999999888 6899999999999999999999999999999999999999999999999998765
Q ss_pred cCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHh
Q psy4448 82 FENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 161 (487)
Q Consensus 82 ~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~ 161 (487)
+. ++.+++|++++.. +++++|||||||+++ ...+.+.|.++|+.|+++|.++++||+||++++.++++++|+++
T Consensus 81 ~~---~~~~~~l~~~~~~--~~~~~iGe~Gld~~~-~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~~~~~~~il~~~ 154 (268)
T 1j6o_A 81 VP---EDFIEHLEKFAKD--EKVVAIGETGLDFFR-NISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAYSEAYEILRTE 154 (268)
T ss_dssp CC---TTHHHHHHHHTTS--TTEEEEEEEEEETTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHS
T ss_pred cC---HHHHHHHHHHhcc--CCEEEEEccccCCcc-cCCChHHHHHHHHHHHHHHHHhCCCEEEEeCchHHHHHHHHHhc
Confidence 42 3457888888865 689999999999987 55568999999999999999999999999999999999999998
Q ss_pred CCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCcccc
Q psy4448 162 APKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMV 241 (487)
Q Consensus 162 ~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (487)
+... .++|+|||+|+.+.++++++.
T Consensus 155 p~~~-~~~I~H~~~g~~~~~~~~~~~------------------------------------------------------ 179 (268)
T 1j6o_A 155 SLPE-KRGVIHAFSSDYEWAKKFIDL------------------------------------------------------ 179 (268)
T ss_dssp CCCS-SCEEETTCCSCHHHHHHHHHH------------------------------------------------------
T ss_pred CCCC-CCEEEEcCCCCHHHHHHHHHC------------------------------------------------------
Confidence 6312 478899999999988877765
Q ss_pred CCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchh-hHHHhhh
Q psy4448 242 KSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKE-NLETVKS 320 (487)
Q Consensus 242 ~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~-~~e~v~~ 320 (487)
|+|++|+|. .++++.+ .+++++.
T Consensus 180 ---------------------------------------------------g~y~~~sg~-----~~~~~~~~l~~~i~~ 203 (268)
T 1j6o_A 180 ---------------------------------------------------GFLLGIGGP-----VTYPKNEALREVVKR 203 (268)
T ss_dssp ---------------------------------------------------TEEEEECGG-----GGCTTCHHHHHHHHH
T ss_pred ---------------------------------------------------CCeEEeccc-----ccccchHHHHHHHHh
Confidence 579999994 4555433 4589999
Q ss_pred CCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHH
Q psy4448 321 IPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNT 400 (487)
Q Consensus 321 iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~ 400 (487)
+|+||||+|||+||+.+.|. +|++|+|.++..+++.+|+++|++.+++.+++++|+
T Consensus 204 ~~~driL~eTD~P~~~~~~~------------------------~g~~n~p~~~~~~~~~la~~~~~~~e~~~~i~~~Na 259 (268)
T 1j6o_A 204 VGLEYIVLETDCPFLPPQPF------------------------RGKRNEPKYLKYVVETISQVLGVPEAKVDEATTENA 259 (268)
T ss_dssp HCGGGEEECCCBTSCCCGGG------------------------TTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHHH
T ss_pred CChhhEEEecCCCCCCCccc------------------------CCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHHH
Confidence 99999999999999765442 478999999999999999999999999999999999
Q ss_pred HHhcCCC
Q psy4448 401 LRLFFPH 407 (487)
Q Consensus 401 ~rlf~~~ 407 (487)
.|||++.
T Consensus 260 ~rlf~l~ 266 (268)
T 1j6o_A 260 RRIFLEV 266 (268)
T ss_dssp HHHHHSC
T ss_pred HHHhCcc
Confidence 9999874
No 10
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=5.4e-47 Score=375.27 Aligned_cols=227 Identities=17% Similarity=0.213 Sum_probs=176.9
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCH----------HhHHHHHHH----HhcCC-
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNV----------EDSISSLKL----AQSDE- 66 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~----------~~~~~~~~l----a~~~~- 66 (487)
|+||+||||++..| +++++|+++||.+++++|+++ ++|++++++ +++++
T Consensus 1 m~iDtH~Hld~~~~----------------~~l~~a~~~GV~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~~a~~~~~ 64 (261)
T 3guw_A 1 MYFDSHLHSEGLGF----------------SELVKLKENGIKEVCSLAFFPVKPKYPQTMIDVFRKLTEFEPLRCEAAGV 64 (261)
T ss_dssp -CCBCCCCGGGCCH----------------HHHHHHHTTSCCEECCBCCCSSCCSSHHHHHHHHHHHHHTHHHHHHTTTC
T ss_pred CeEEeccCCCCCCh----------------HHHHHHHHCCCcEEEEeccCccccchhhhHHHHHHHHHHHHHHHHHHCCC
Confidence 58999999997544 257999999999999999886 568888754 77886
Q ss_pred CeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEE
Q psy4448 67 RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLH 146 (487)
Q Consensus 67 ~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH 146 (487)
++|+++|+|||++.+. .+.+.+.+.+ ++++|||||||||++ +.|+++|++||++|+++++||+||
T Consensus 65 ~v~~~~GiHP~~~~~~-------~~~~~~~l~~--~~vvaIGEiGLD~~~------~~Q~~~f~~ql~lA~e~~lPv~iH 129 (261)
T 3guw_A 65 KMHPAVGIHPRCIPPD-------YEFVLGYLEE--GEWVAFGEIGLELVT------DEEIEVLKSQLELAKRMDVPCIIH 129 (261)
T ss_dssp EECCBCCCCGGGCCTT-------THHHHHHHTT--SCCSCEEEEECSSCC------HHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEEECccccccc-------HHHHHHHhCc--CCeEEEEEecCCCCh------HHHHHHHHHHHHHHHHhCCeEEEE
Confidence 7999999999988532 1223344444 689999999999864 789999999999999999999999
Q ss_pred ecC-----chHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccc
Q psy4448 147 CRN-----AKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFA 221 (487)
Q Consensus 147 ~r~-----a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~ 221 (487)
+|+ |.++++++|++++......+|+|| +.+++++++++
T Consensus 130 ~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~---~~~~a~~~l~~---------------------------------- 172 (261)
T 3guw_A 130 TPRGNKLKATRKTLEILESLDFPADLAVIDHV---NFETLDMVLET---------------------------------- 172 (261)
T ss_dssp CCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC---CTTTHHHHHTS----------------------------------
T ss_pred cCCCcccchHHHHHHHHHHcCCCCCCEEEEeC---CHHHHHHHHhC----------------------------------
Confidence 996 479999999998643211356788 67888888876
Q ss_pred hhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEee--
Q psy4448 222 YIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFD-- 299 (487)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfs-- 299 (487)
|+|+||+
T Consensus 173 -----------------------------------------------------------------------G~yis~~~~ 181 (261)
T 3guw_A 173 -----------------------------------------------------------------------EYWIGLTVQ 181 (261)
T ss_dssp -----------------------------------------------------------------------SSEEEEECC
T ss_pred -----------------------------------------------------------------------CEEEEecCC
Confidence 4699999
Q ss_pred -CCcccccccccchhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHH
Q psy4448 300 -GTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQIL 378 (487)
Q Consensus 300 -G~~~~~~~~~k~~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~ 378 (487)
|. +++++ .+++++.+|+||||+|||+||. +|+|.++..++
T Consensus 182 pg~-----~t~~~--~~~~v~~ipldrlLlETD~P~~--------------------------------pn~P~~v~~~~ 222 (261)
T 3guw_A 182 PGK-----LSAED--AARIVAEHGPERFMLNSDAGYR--------------------------------DVEITTVAEAA 222 (261)
T ss_dssp ------------C--CTTGGGGCC-CCEEEECCCCCC--------------------------------------CCCCT
T ss_pred CCc-----ccHHH--HHHHHHhCCcceEEEecCCCCC--------------------------------CCCHHHHHHHH
Confidence 63 55553 4689999999999999999981 36899999999
Q ss_pred HHHHHhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 379 EIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 379 ~~iA~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
+.||+++|++. +++++++|+.+||++..
T Consensus 223 ~~la~~~g~~~--v~~~~~~Na~rlf~~~~ 250 (261)
T 3guw_A 223 VKIEEAVGREE--MEKVARENARKFLRVLE 250 (261)
T ss_dssp THHHHHCTTGG--GGHHHHSSHHHHTTC--
T ss_pred HHHHhhCChhH--HHHHHHHHHHHHHCCCc
Confidence 99999999986 99999999999999863
No 11
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=100.00 E-value=1.3e-42 Score=340.22 Aligned_cols=256 Identities=27% Similarity=0.404 Sum_probs=220.2
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
||+||+|||+++..|.. ...++++++++++++||..+|++++++.+++.+.++++++|++++++|+||+...
T Consensus 1 m~~iD~H~Hl~~~~~~~--------~~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~p~~~~~~g~hP~~~~ 72 (265)
T 1yix_A 1 MFLVDSHCHLDGLDYES--------LHKDVDDVLAKAAARDVKFCLAVATTLPSYLHMRDLVGERDNVVFSCGVHPLNQN 72 (265)
T ss_dssp CCEEEEEECGGGSCTTT--------TCSSHHHHHHHHHHTTEEEEEECCSSHHHHHHHHHHHCSCTTEEEEECCCTTCCS
T ss_pred CcEEEEeeCCCchhhcc--------cccCHHHHHHHHHHCCCCEEEEeCCCHHHHHHHHHHHHHCCCeEEEEEeCCCccc
Confidence 89999999999765511 1368999999999999999999999999999999999999999999999999875
Q ss_pred CcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHH
Q psy4448 81 EFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 160 (487)
Q Consensus 81 ~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~ 160 (487)
.. ..+++|++++.. +++++|||+|||+++ ...+.+.|.++|+.|+++|.++++||+||++++.++++++|++
T Consensus 73 ~~-----~~~~~l~~~~~~--~~~~~iGe~Gl~~~~-~~~~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~l~~ 144 (265)
T 1yix_A 73 DP-----YDVEDLRRLAAE--EGVVALGETGLDYYY-TPETKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILRE 144 (265)
T ss_dssp SC-----CCHHHHHHHHTS--TTEEEEEEEEEECTT-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHH
T ss_pred cc-----chHHHHHHHhcc--CCeEEEEccccCCCc-CCCChHHHHHHHHHHHHHHHHhCCCEEEEecCchHHHHHHHHh
Confidence 42 125788888865 689999999999987 5566899999999999999999999999999999999999998
Q ss_pred hCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccc
Q psy4448 161 YAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKM 240 (487)
Q Consensus 161 ~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (487)
++... .++|+|||+|+.+.++++++.
T Consensus 145 ~~~p~-~~~v~H~~~~~~~~~~~~~~~----------------------------------------------------- 170 (265)
T 1yix_A 145 EKVTD-CGGVLHCFTEDRETAGKLLDL----------------------------------------------------- 170 (265)
T ss_dssp TTGGG-TCEEETTCCSCHHHHHHHHTT-----------------------------------------------------
T ss_pred cCCCC-CCEEEEcCCCCHHHHHHHHHC-----------------------------------------------------
Confidence 64211 378999999999888877765
Q ss_pred cCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhh-HHHhh
Q psy4448 241 VKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKEN-LETVK 319 (487)
Q Consensus 241 ~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~-~e~v~ 319 (487)
|+|++++|+ .+++..+. +++++
T Consensus 171 ----------------------------------------------------g~~~~~sg~-----~~~~~~~~~~~~~~ 193 (265)
T 1yix_A 171 ----------------------------------------------------GFYISFSGI-----VTFRNAEQLRDAAR 193 (265)
T ss_dssp ----------------------------------------------------TCEEEECGG-----GGSTTCHHHHHHHH
T ss_pred ----------------------------------------------------CcEEEECCc-----cccCchHHHHHHHH
Confidence 469999984 45554443 48999
Q ss_pred hCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHH
Q psy4448 320 SIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQN 399 (487)
Q Consensus 320 ~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N 399 (487)
.+|.||||+|||+||+.+.+. +|++|.|.++..+++.+++++|++.+++.+++++|
T Consensus 194 ~~~~drll~~TD~P~~~~~~~------------------------~g~~~~~~~l~~~~~~l~~~~~~~~~~~~~i~~~N 249 (265)
T 1yix_A 194 YVPLDRLLVETDSPYLAPVPH------------------------RGKENQPAMVRDVAEYMAVLKGVAVEELAQVTTDN 249 (265)
T ss_dssp HSCGGGEEECCCBTSCCCTTC------------------------TTSCCCGGGHHHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred hCChHHEEEecCCCCCCCccc------------------------CCCCCchHHHHHHHHHHHHHhCcCHHHHHHHHHHH
Confidence 999999999999999765442 47789999999999999999999999999999999
Q ss_pred HHHhcCCC
Q psy4448 400 TLRLFFPH 407 (487)
Q Consensus 400 ~~rlf~~~ 407 (487)
+.++|++.
T Consensus 250 a~rl~~l~ 257 (265)
T 1yix_A 250 FARLFHID 257 (265)
T ss_dssp HHHHTTCC
T ss_pred HHHHhCcC
Confidence 99999985
No 12
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=100.00 E-value=5.8e-41 Score=328.21 Aligned_cols=257 Identities=32% Similarity=0.528 Sum_probs=217.4
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCCC
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSE 81 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~~ 81 (487)
|+||+|||+++..| ..+++++++++.++||+++|++++++.+++.+.++++++|++++++|+||+....
T Consensus 1 m~iD~H~Hl~~~~~-----------~~~~~~~l~~~~~~Gv~~~v~~~~~~~~~~~~~~~~~~~p~~~~~~g~~P~~~~~ 69 (265)
T 2gzx_A 1 MLIDTHVHLNDEQY-----------DDDLSEVITRAREAGVDRMFVVGFNKSTIERAMKLIDEYDFLYGIIGWHPVDAID 69 (265)
T ss_dssp -CEEEEECTTSGGG-----------TTTHHHHHHHHHHTTCCEEEEEECSHHHHHHHHHHHHHCTTEEEEECCCGGGGGG
T ss_pred CeEEEeeCCCCccc-----------ccCHHHHHHHHHHcCCCEEEEeCCCHHHHHHHHHHHHhCCCEEEEEEeccCcccc
Confidence 58999999998766 4689999999999999999999999999999999999999999999999998654
Q ss_pred cCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHh
Q psy4448 82 FENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 161 (487)
Q Consensus 82 ~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~ 161 (487)
.. ++.+++|++++.. +++++|||+|||+++ ...+.+.|.++|+.|+++|.++|+||+||++++.++++++++++
T Consensus 70 ~~---~~~~~~l~~~~~~--~~~~~iGe~Gl~~~~-~~~~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~l~~~ 143 (265)
T 2gzx_A 70 FT---EEHLEWIESLAQH--PKVIGIGEMGLDYHW-DKSPADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEE 143 (265)
T ss_dssp CC---HHHHHHHHHHTTS--TTEEEEEEEEEECSC-CSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHT
T ss_pred CC---HHHHHHHHHHhcC--CCEEEEEeccCCCCC-CCCCHHHHHHHHHHHHHHHHHcCCcEEEEecccHHHHHHHHHhc
Confidence 31 3457888888865 689999999999976 44567899999999999999999999999999999999999998
Q ss_pred CCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCcccc
Q psy4448 162 APKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMV 241 (487)
Q Consensus 162 ~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (487)
+... .++|+|||+|+.+.++++++.
T Consensus 144 p~~~-~~~i~H~~~g~~~~~~~~l~~------------------------------------------------------ 168 (265)
T 2gzx_A 144 HAEE-VGGIMHSFSGSPEIADIVTNK------------------------------------------------------ 168 (265)
T ss_dssp TGGG-TCEEETTCCSCHHHHHHHHHT------------------------------------------------------
T ss_pred CCCC-CcEEEEcCCCCHHHHHHHHHH------------------------------------------------------
Confidence 6211 478999999998887776652
Q ss_pred CCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccch-hhHHHhhh
Q psy4448 242 KSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK-ENLETVKS 320 (487)
Q Consensus 242 ~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~-~~~e~v~~ 320 (487)
.|+|++++|. .+++.. ..+++++.
T Consensus 169 --------------------------------------------------~~~y~~~sg~-----~~~~~~~~~~~~i~~ 193 (265)
T 2gzx_A 169 --------------------------------------------------LNFYISLGGP-----VTFKNAKQPKEVAKH 193 (265)
T ss_dssp --------------------------------------------------SCCEEEECGG-----GGCSSCCHHHHHHHH
T ss_pred --------------------------------------------------CCceEEecce-----eecCCcHHHHHHHHh
Confidence 1579999984 344332 34589999
Q ss_pred CCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHH
Q psy4448 321 IPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNT 400 (487)
Q Consensus 321 iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~ 400 (487)
+|.||||+|||+||+.+.+. ++++|.|.++..+++.+++++|++.+++.+++++|+
T Consensus 194 ~~~dril~gSD~P~~~~~~~------------------------~g~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~Na 249 (265)
T 2gzx_A 194 VSMERLLVETDAPYLSPHPY------------------------RGKRNEPARVTLVAEQIAELKGLSYEEVCEQTTKNA 249 (265)
T ss_dssp SCTTTEEECCCTTSCCCTTC------------------------TTSCCCGGGHHHHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred CChhhEEEccCCCCCCCccc------------------------CCCCCChHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 99999999999999765542 377899999999999999999999999999999999
Q ss_pred HHhcCCCCC
Q psy4448 401 LRLFFPHEL 409 (487)
Q Consensus 401 ~rlf~~~~~ 409 (487)
.|||++...
T Consensus 250 ~rl~~~~~~ 258 (265)
T 2gzx_A 250 EKLFNLNSL 258 (265)
T ss_dssp HHHHC----
T ss_pred HHHhCCchh
Confidence 999998744
No 13
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=100.00 E-value=1.6e-37 Score=316.92 Aligned_cols=254 Identities=14% Similarity=0.129 Sum_probs=192.5
Q ss_pred CcEEEecccCCC--cccccccccCCCCCC-----CCHHH-H---HHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-
Q psy4448 1 MKYIDIGANLKD--AMYEGFYSSKNQKHE-----PDIDH-V---LNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE- 66 (487)
Q Consensus 1 m~~iD~H~HL~~--~~f~~~~~g~~~~~~-----~d~~~-v---l~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~- 66 (487)
|.+||+||||+. ..| +.+ ..+ .++++ + +++++++||+.++.++++ ..+++.+.+++++++
T Consensus 15 lGliD~H~HL~~~~~~~---~~~---~~~~~~~~~d~~~~~~~~l~~~~~aGV~~iv~~~~~~~~~~~~~~~~la~~~~~ 88 (330)
T 2ob3_A 15 AGFTLTHEHICGSSAGF---LRA---WPEFFGSRKALAEKAVRGLRRARAAGVRTIVDVSTFDIGRDVSLLAEVSRAADV 88 (330)
T ss_dssp HCSEEEEECSEECCTTH---HHH---CGGGGSCHHHHHHHHHHHHHHHHHTTCCEEEECCCGGGTCCHHHHHHHHHHHTC
T ss_pred CCCceeeeCeecCCchh---ccC---CCchhhhccCHHHHHHHHHHHHHHcCCCEEEeCCCCCcCCCHHHHHHHHHHhCC
Confidence 458999999986 222 000 001 34445 4 899999999999999986 478999999999988
Q ss_pred CeEEEeecCC---CCCCCcCCCchhhH-HHHHHHHHh----cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhh
Q psy4448 67 RLYSTVGCHP---TRCSEFENDPEGYL-QSLDKIIKE----GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVT 138 (487)
Q Consensus 67 ~v~~avGiHP---~~~~~~~~~~~~~l-~~L~~ll~~----~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~e 138 (487)
++|+++|+|| .++... ..+.+ +.+.+.+.. +..+++|| ||||| + . ..+.|+++|++|+++|++
T Consensus 89 ~i~~~~G~hp~~p~~~~~~---~~~~l~~~l~~~~~~gi~~~~~k~~ai-EiGld-~--~--~~~~q~~~f~~q~~lA~~ 159 (330)
T 2ob3_A 89 HIVAATGLWFDPPLSMRLR---SVEELTQFFLREIQYGIEDTGIRAGII-KVATT-G--K--ATPFQELVLKAAARASLA 159 (330)
T ss_dssp EEECEEECCSCCCHHHHTC---CHHHHHHHHHHHHHTCSTTSCCCCSEE-EEECS-S--S--CCHHHHHHHHHHHHHHHH
T ss_pred cEEEEecCCcCCCchhccC---CHHHHHHHHHHHHHhhccccccceeEE-EEeCC-C--C--CCHHHHHHHHHHHHHHHH
Confidence 7999999996 322111 12223 334444421 21378999 99999 3 2 348999999999999999
Q ss_pred CCCCEEEEe----cCchHHHHHHHHHhCCCCCCc-EEEEec-CCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCC
Q psy4448 139 HKLPLFLHC----RNAKSDFIEIMKEYAPKLPRK-GVIHSF-DGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCE 212 (487)
Q Consensus 139 l~lPViIH~----r~a~~d~l~iLk~~~~~~~~~-~v~H~F-sG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~ 212 (487)
+++||+||+ |++. +++++|++.+... .+ +|+||| +|+.+++++++++
T Consensus 160 ~glPv~iH~~~~~r~a~-e~l~iL~~~g~~~-~~~~i~H~f~~~~~e~a~~~~~~------------------------- 212 (330)
T 2ob3_A 160 TGVPVTTHTAASQRDGE-QQAAIFESEGLSP-SRVCIGHSDDTDDLSYLTALAAR------------------------- 212 (330)
T ss_dssp HCCCEEEECCGGGTHHH-HHHHHHHHTTCCG-GGEEECSGGGCCCHHHHHHHHHT-------------------------
T ss_pred hCCeEEEECCCCCCCHH-HHHHHHHHcCcCc-ccEEEeCCCCCCCHHHHHHHHhC-------------------------
Confidence 999999999 8888 9999999875422 24 688999 8999999999987
Q ss_pred CCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCC
Q psy4448 213 VKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRK 292 (487)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~ 292 (487)
T Consensus 213 -------------------------------------------------------------------------------- 212 (330)
T 2ob3_A 213 -------------------------------------------------------------------------------- 212 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEee--CCcccccccc------------------cchh-hHHHhhhCCCCceEeccCCCC-CCCC-CCCcchhhHhh
Q psy4448 293 GVIHSFD--GTPFQAVDSL------------------KTKE-NLETVKSIPEDRLLLETDCPW-CEVK-PSHAGFAYIRT 349 (487)
Q Consensus 293 gv~hsfs--G~~~~~~~~~------------------k~~~-~~e~v~~iPldrlLlETD~P~-~~~~-p~~~~~~~l~~ 349 (487)
|+|+||+ |. .++ ++.+ .+++++.+|+||||+|||+|| +.+. |.
T Consensus 213 G~~i~~~~~G~-----~tf~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~~l~~~~~~--------- 278 (330)
T 2ob3_A 213 GYLIGLDHIPY-----SAIGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTFGFSSYVTN--------- 278 (330)
T ss_dssp TCEEEECCTTC-----CCTTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCSEECSSSTT---------
T ss_pred CCEEEeCCCcc-----ccccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCCCccccccc---------
Confidence 4589999 63 444 3333 347999999999999999997 3321 11
Q ss_pred hhhhhhhhccCCccCCCCC---Ccc-ccHHHHHHHHHHh--hCCCHHHHHHHHHHHHHHhcC
Q psy4448 350 QHEKVKKEQWKPDKMVKSR---NEP-ANIVQILEIVAAV--RGVEREKLGPIIHQNTLRLFF 405 (487)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~---n~P-~~l~~v~~~iA~i--kg~~~~~va~~~~~N~~rlf~ 405 (487)
++++ |+| .++..+.+.++++ +|++.+++++++++|+.++|+
T Consensus 279 ---------------~g~~~~~n~pn~~~~~~~~~ia~l~~~G~~~eev~~~~t~N~~rlf~ 325 (330)
T 2ob3_A 279 ---------------IMDVMDRVNPDGMAFIPLRVIPFLREKGVPQETLAGITVTNPARFLS 325 (330)
T ss_dssp ---------------HHHHHHHHCTTGGGHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHHS
T ss_pred ---------------CCCcccccCCCCcchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhc
Confidence 2444 889 8988888888888 999999999999999999997
No 14
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=99.98 E-value=7.1e-33 Score=278.18 Aligned_cols=267 Identities=13% Similarity=0.083 Sum_probs=190.9
Q ss_pred CcEEEecccCCC--cccccccccCCC--CCCCCHHHH---HHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-CeEE
Q psy4448 1 MKYIDIGANLKD--AMYEGFYSSKNQ--KHEPDIDHV---LNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE-RLYS 70 (487)
Q Consensus 1 m~~iD~H~HL~~--~~f~~~~~g~~~--~~~~d~~~v---l~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~-~v~~ 70 (487)
|.+||+|||++. ..| +...-. ....+.+.+ ++++.++||+.++.++++ ..+++.+.+++++++ ++++
T Consensus 16 ~G~iD~H~Hl~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~ 92 (314)
T 2vc7_A 16 IGFTLIHEHLRVFSEAV---RQQWPHLYNEDEEFRNAVNEVKRAMQFGVKTIVDPTVMGLGRDIRFMEKVVKATGINLVA 92 (314)
T ss_dssp CCSEESSCBSCBCCHHH---HHHCGGGCCHHHHHHHHHHHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEE
T ss_pred cCCcccccccccCcchh---cccCcchhhhcccHHHHHHHHHHHHHcCCCEEEecCCCCCCcCHHHHHHHHHHcCCeEEE
Confidence 458999999975 222 000000 000344455 488999999999999877 456888899998887 7999
Q ss_pred EeecCCCCCC-CcCCCchhhHHHHHHHHHhcCCCEEEEEeeC---------CCCCCCCCCChHHHHHHHHHHHHHhhhCC
Q psy4448 71 TVGCHPTRCS-EFENDPEGYLQSLDKIIKEGGKKVVAFGEFG---------LDYDRVQYCPVETQLKYFRKQLDLSVTHK 140 (487)
Q Consensus 71 avGiHP~~~~-~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIG---------LD~~~~~~~~~e~Q~~vF~~qL~LA~el~ 140 (487)
++|+||+.+. ... .+..++.|.+++.. +.++|||||| |||+. ..+.|+++|++|+++|++++
T Consensus 93 ~~G~hp~~~~~~~~--~~~~~~~l~~~~~~--~~~~gige~G~~~g~i~~~ld~~~----~~~~q~~~~~~~~~lA~~~~ 164 (314)
T 2vc7_A 93 GTGIYIYIDLPFYF--LNRSIDEIADLFIH--DIKEGIQGTLNKAGFVKIAADEPG----ITKDVEKVIRAAAIANKETK 164 (314)
T ss_dssp CEEBCCSSCCCGGG--TTCCHHHHHHHHHH--HHHTCSSSSSCCCCSEEEECCTTC----SCHHHHHHHHHHHHHHHHHC
T ss_pred EeecCCCCCCchhh--hccCHHHHHHHHHH--HHHhhcccCCCCCCeEEEeecCCC----CCHHHHHHHHHHHHHHHHHC
Confidence 9999998752 221 01236677777765 4678999999 88753 35889999999999999999
Q ss_pred CCEEEEec---CchHHHHHHHHHhCCCCCCc-EEEEecC-CCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCC
Q psy4448 141 LPLFLHCR---NAKSDFIEIMKEYAPKLPRK-GVIHSFD-GTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKP 215 (487)
Q Consensus 141 lPViIH~r---~a~~d~l~iLk~~~~~~~~~-~v~H~Fs-G~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~ 215 (487)
+||+||++ ++..+++++|++.+... .+ ++.|||+ ++.+++++++++
T Consensus 165 ~pv~iH~~~~~~~~~~~~~~l~~~~~~~-~~~~i~H~~~~~~~~~~~~~~~~---------------------------- 215 (314)
T 2vc7_A 165 VPIITHSNAHNNTGLEQQRILTEEGVDP-GKILIGHLGDTDNIDYIKKIADK---------------------------- 215 (314)
T ss_dssp CCEEEECCTTTTHHHHHHHHHHHTTCCG-GGEEETTGGGCCCHHHHHHHHHT----------------------------
T ss_pred CEEEEeCCCcccChHHHHHHHHHcCCCc-ccEEEECCCCCCCHHHHHHHHHc----------------------------
Confidence 99999995 67789999999875422 24 5779997 679998888877
Q ss_pred CCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEE
Q psy4448 216 SHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVI 295 (487)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~ 295 (487)
|+|
T Consensus 216 -----------------------------------------------------------------------------G~~ 218 (314)
T 2vc7_A 216 -----------------------------------------------------------------------------GSF 218 (314)
T ss_dssp -----------------------------------------------------------------------------TCE
T ss_pred -----------------------------------------------------------------------------CCE
Confidence 458
Q ss_pred EEeeCCcccccccccc-hhhHH-HhhhC---CCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCC--
Q psy4448 296 HSFDGTPFQAVDSLKT-KENLE-TVKSI---PEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSR-- 368 (487)
Q Consensus 296 hsfsG~~~~~~~~~k~-~~~~e-~v~~i---PldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~-- 368 (487)
+||+|.. ..++.+ .+..+ +.+.+ |+||||+|||+|+..+.|...+ ++. .++++
T Consensus 219 i~~~~~~---~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~~~~~~~~~~p--~~~---------------~~g~~~~ 278 (314)
T 2vc7_A 219 IGLDRYG---LDLFLPVDKRNETTLRLIKDGYSDKIMISHDYCCTIDWGTAKP--EYK---------------PKLAPRW 278 (314)
T ss_dssp EEECCTT---CTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCBSSBCCGGGCT--TSH---------------HHHCTTC
T ss_pred EEEeCCC---cccCCCHHHHHHHHHHHHHcCCCCeEEEcCCccccccccccch--hhh---------------hcCCCCc
Confidence 9999731 123333 23333 33333 5899999999987421110000 000 02456
Q ss_pred CccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC
Q psy4448 369 NEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405 (487)
Q Consensus 369 n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~ 405 (487)
|.|.++..+++.+ ..+|++.+++.+++++|+.|||+
T Consensus 279 ~~~~~~~~~~~~l-~~~g~~~e~~~~~~~~N~~rlf~ 314 (314)
T 2vc7_A 279 SITLIFEDTIPFL-KRNGVNEEVIATIFKENPKKFFS 314 (314)
T ss_dssp STTHHHHTHHHHH-HHTTCCHHHHHHHHTHHHHHHTC
T ss_pred CHHHHHHHHHHHH-HHcCCCHHHHHHHHHHCHHHHhC
Confidence 8899999999998 67899999999999999999985
No 15
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=99.98 E-value=1.2e-31 Score=277.02 Aligned_cols=235 Identities=17% Similarity=0.167 Sum_probs=182.9
Q ss_pred HHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-CeEEEeecC-----CCCCCCcCCCchhhHHHHHHHHHh----
Q psy4448 32 HVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE-RLYSTVGCH-----PTRCSEFENDPEGYLQSLDKIIKE---- 99 (487)
Q Consensus 32 ~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~-~v~~avGiH-----P~~~~~~~~~~~~~l~~L~~ll~~---- 99 (487)
+.+++++++||+.+|.++++ ..+|..+.+++++++ +++++.|+| |+++... .++.|.+++..
T Consensus 90 ~~l~~~~~aGv~tiV~~t~~g~gr~~~~l~~la~~~gv~i~~~tG~y~~~~~P~~~~~~------~~~~L~~~~~~ei~~ 163 (364)
T 3k2g_A 90 AEVKQFAAVGGRSIVDPTCRGIGRDPVKLRRISAETGVQVVMGAGYYLASSMPETAARL------SADDIADEIVAEALE 163 (364)
T ss_dssp HHHHHHHHTTCCEEEECCCBTTTCCHHHHHHHHHHHCCEEEECCSBCCGGGCCGGGGTC------CHHHHHHHHHHHHHT
T ss_pred HHHHHHHhcCCCeEEEeCCCcccCCHHHHHHHHHHhCCcEEEEeCccCCCCCchhhccC------CHHHHHHHHHHHHHh
Confidence 57788999999999999875 579999999999998 899999999 8766532 13445444332
Q ss_pred ----cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEe--c-CchHHHHHHHHHhCCCCCCcEE-E
Q psy4448 100 ----GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHC--R-NAKSDFIEIMKEYAPKLPRKGV-I 171 (487)
Q Consensus 100 ----~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~--r-~a~~d~l~iLk~~~~~~~~~~v-~ 171 (487)
...++.+||||||||. ..+.|+++|++|+++|+++++||+||+ | ++..+++++|++.+... .+++ .
T Consensus 164 Gi~~~~vkag~IGEiGld~~-----~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~~-~~vvi~ 237 (364)
T 3k2g_A 164 GTDGTDARIGLIGEIGVSSD-----FTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADL-RHTVLC 237 (364)
T ss_dssp CBTTBSCCCSSEEEEECCTT-----CCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCG-GGEEEC
T ss_pred ccccCCcceeEEEEEEcCCC-----CCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCCC-CceEEE
Confidence 1235566999999973 248999999999999999999999999 6 89999999999886532 2444 4
Q ss_pred Eec-CC-CHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhh
Q psy4448 172 HSF-DG-TPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPAN 249 (487)
Q Consensus 172 H~F-sG-~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q 249 (487)
||| +| +.+++++++++
T Consensus 238 H~~~s~~~~e~a~~~l~~-------------------------------------------------------------- 255 (364)
T 3k2g_A 238 HMNPSHMDPVYQATLAQR-------------------------------------------------------------- 255 (364)
T ss_dssp CCGGGTTCHHHHHHHHHH--------------------------------------------------------------
T ss_pred CCCCCCCCHHHHHHHHhC--------------------------------------------------------------
Confidence 999 69 99999999987
Q ss_pred HHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCccccccccc-----------chhh-HHH
Q psy4448 250 IVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK-----------TKEN-LET 317 (487)
Q Consensus 250 ~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k-----------~~~~-~e~ 317 (487)
|+|+||+|... ..+++ +.+. +++
T Consensus 256 -------------------------------------------G~~I~f~g~gt--~~~f~~~~~~~~~d~~ra~~l~~l 290 (364)
T 3k2g_A 256 -------------------------------------------GAFLEFDMIGM--DFFYADQGVQCPSDDEVARAILGL 290 (364)
T ss_dssp -------------------------------------------TCEEEECCTTC--CCEETTTTEECCCHHHHHHHHHHH
T ss_pred -------------------------------------------CcEEEecCCcc--cccccccccccccHHHHHHHHHHH
Confidence 45999998411 01232 2222 478
Q ss_pred hhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHH
Q psy4448 318 VKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIH 397 (487)
Q Consensus 318 v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~ 397 (487)
++.+|+||||+|||+||..+.+. .++ |.|.++...+...++++|++.++++++++
T Consensus 291 v~~gp~drilleTD~p~~~~~~~------------------------~gg-~~~~~l~~~~~~~l~~~Gis~eei~~~~~ 345 (364)
T 3k2g_A 291 ADHGYLDRILLSHDVFVKMMLTR------------------------YGG-NGYAFVTKHFLPRLRRHGLDDAALETLMV 345 (364)
T ss_dssp HHTTCGGGEEECCCCCSGGGSGG------------------------GTS-CTTSHHHHHHHHHHHHTTCCHHHHHHHHT
T ss_pred HHhCCcccEEEeCCCCCCCCCCC------------------------CCC-CCcchHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999998432221 244 78999987555555689999999999999
Q ss_pred HHHHHhcCCCCCC
Q psy4448 398 QNTLRLFFPHELP 410 (487)
Q Consensus 398 ~N~~rlf~~~~~~ 410 (487)
+|..|+|++..+.
T Consensus 346 ~Np~rlf~l~~~~ 358 (364)
T 3k2g_A 346 TNPRRVFDASIEG 358 (364)
T ss_dssp HHHHHHHCTTSCC
T ss_pred HHHHHHhCCCccc
Confidence 9999999988554
No 16
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=99.97 E-value=5.1e-32 Score=277.38 Aligned_cols=246 Identities=15% Similarity=0.179 Sum_probs=183.5
Q ss_pred HHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-CeEEEeecCCCCC-CCcCCC-c---hhhHHHHHHHHHhc---
Q psy4448 32 HVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE-RLYSTVGCHPTRC-SEFEND-P---EGYLQSLDKIIKEG--- 100 (487)
Q Consensus 32 ~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~-~v~~avGiHP~~~-~~~~~~-~---~~~l~~L~~ll~~~--- 100 (487)
+-+++|+++||+.+|.++++ ..+|..+.+++++++ +++++.|+||+.. ..+... . ...++.|.+++...
T Consensus 67 ~el~~a~~aGv~tiV~~~~~~~~r~~~~l~~la~~~g~~i~~~tG~hp~~~~~~~~~~~~~~~~~~~~~L~~~~~~e~~~ 146 (339)
T 3gtx_A 67 ETARALLARGIQTVVDATPNGCGRNPAFLREVSEATGLQILCATGFYYEGGGATTYFKFRASLGDAESEIYEMMRTEVTE 146 (339)
T ss_dssp HHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHCCEEECEECCCCTTTSSCHHHHHHHHHSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhCCCeEEecCCCccCcCHHHHHHHHHHcCCcEEEEcCCCccCccCCcCCcccccccCCHHHHHHHHHHHHHh
Confidence 35678999999999999875 589999999999876 7999999999754 110000 0 12346676666541
Q ss_pred -----CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEe---cCchHHHHHHHHHhCCCCCCcE-EE
Q psy4448 101 -----GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHC---RNAKSDFIEIMKEYAPKLPRKG-VI 171 (487)
Q Consensus 101 -----~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~---r~a~~d~l~iLk~~~~~~~~~~-v~ 171 (487)
.-++.+| ||||||+. ..+.|+++|++|+++|+++++||+||+ |++.+ ++++|++.+... .++ +.
T Consensus 147 gIg~tg~k~g~I-Eigld~~~----~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~~-~~~iL~~~~~~~-~~~vi~ 219 (339)
T 3gtx_A 147 GIAGTGIRAGVI-KLASSRDA----ITPYEQLFFRAAARVQRETGVPIITHTQEGQQGPQ-QAELLTSLGADP-ARIMIG 219 (339)
T ss_dssp CSTTSSCCCSEE-EEECCSSC----CCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHHH-HHHHHHHTTCCG-GGEEEC
T ss_pred cccccCcccceE-EEEcCCCC----CCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHHH-HHHHHHHcCCCc-ccEEEE
Confidence 1134566 99999862 458999999999999999999999999 88885 899999986532 344 56
Q ss_pred Eec-CCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhH
Q psy4448 172 HSF-DGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANI 250 (487)
Q Consensus 172 H~F-sG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~ 250 (487)
||| +++.+++++++++
T Consensus 220 H~~~~~~~e~a~~~l~~--------------------------------------------------------------- 236 (339)
T 3gtx_A 220 HMDGNTDPAYHRETLRH--------------------------------------------------------------- 236 (339)
T ss_dssp CGGGCCCHHHHHHHHTT---------------------------------------------------------------
T ss_pred ccCCCCCHHHHHHHHHc---------------------------------------------------------------
Confidence 999 7999999999987
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccc----cccccchhh-HHHhhhCCCCc
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA----VDSLKTKEN-LETVKSIPEDR 325 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~----~~~~k~~~~-~e~v~~iPldr 325 (487)
|+|+||+|..... ...+++.+. +++++.+|+||
T Consensus 237 ------------------------------------------G~~i~~~g~~t~~~~~~p~~~~~~~~l~~li~~~~~dr 274 (339)
T 3gtx_A 237 ------------------------------------------GVSIAFDRIGLQGMVGTPTDAERLSVLTTLLGEGYADR 274 (339)
T ss_dssp ------------------------------------------TCEEEECCTTCCSSTTCCCHHHHHHHHHHHHHTTCGGG
T ss_pred ------------------------------------------CcEEEEccCccccccCCCchHHHHHHHHHHHHhcCCCe
Confidence 4599999941100 011233333 48999999999
Q ss_pred eEeccCCCCCCC-CCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhc
Q psy4448 326 LLLETDCPWCEV-KPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLF 404 (487)
Q Consensus 326 lLlETD~P~~~~-~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf 404 (487)
||+|||+||+.+ .|.+-+. . ...+.++|.|.+|..++..+++++|++.+++++++++|+.|+|
T Consensus 275 illeTD~p~~~~~~P~~~p~-----------~-----~~~~~g~n~p~~l~~~~~~~~~~~Gis~e~i~~~~~~Np~rlf 338 (339)
T 3gtx_A 275 LLLSHDSIWHWLGRPPAIPE-----------A-----ALPAVKDWHPLHISDDILPDLRRRGITEEQVGQMTVGNPARLF 338 (339)
T ss_dssp EEECCCCEEEESSSCCCCCG-----------G-----GHHHHHTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHHHHHHH
T ss_pred EEEecCCCccccCCcccccc-----------c-----ccccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHh
Confidence 999999998521 2310000 0 0001346999999999999999999999999999999999998
Q ss_pred C
Q psy4448 405 F 405 (487)
Q Consensus 405 ~ 405 (487)
+
T Consensus 339 ~ 339 (339)
T 3gtx_A 339 G 339 (339)
T ss_dssp C
T ss_pred C
Confidence 5
No 17
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=99.97 E-value=6e-31 Score=271.88 Aligned_cols=232 Identities=16% Similarity=0.128 Sum_probs=183.3
Q ss_pred HHHHHhcCCCEEEEEC-CC--HHhHHHHHHHHhcCC-CeEEEeecC-----CCCCCCcCCCchhhHHHHHHHHHh-----
Q psy4448 34 LNRAWNAGLEKIIVTG-TN--VEDSISSLKLAQSDE-RLYSTVGCH-----PTRCSEFENDPEGYLQSLDKIIKE----- 99 (487)
Q Consensus 34 l~ra~~~GV~~ii~v~-~~--~~~~~~~~~la~~~~-~v~~avGiH-----P~~~~~~~~~~~~~l~~L~~ll~~----- 99 (487)
+++++++||+.+|.++ ++ -.++..+.+++++++ +++++.|+| |++... .++.|.+++..
T Consensus 81 l~~~~~aGv~tiV~~~g~~g~~r~~~~l~~la~~~gi~i~~~tG~y~~~~~P~~~~~-------~~~~L~~~~~~ei~~g 153 (365)
T 3rhg_A 81 LNNFKELGGKTIVDATGSSSIGRDIRKLKQVAELTGINVVASSGLYIEKFEGKRLAD-------DIDAMAKMIDDELNIG 153 (365)
T ss_dssp HHHHHHTTEEEEEECCCSGGGTCCHHHHHHHHHHHCCEEECEECCCCHHHHGGGGGS-------CHHHHHHHHHHHHHTC
T ss_pred HHHHHhcCCCeEEEcCCCCCCCCCHHHHHHHHHHHCCcEEEEeCccCCCCCchhhcC-------CHHHHHHHHHHHHHhc
Confidence 4778899999999887 42 368999999999988 799999999 877653 12344433321
Q ss_pred ---cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhC-CCCEEEEe-c--CchHHHHHHHHHh-CCCCCCcE-E
Q psy4448 100 ---GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTH-KLPLFLHC-R--NAKSDFIEIMKEY-APKLPRKG-V 170 (487)
Q Consensus 100 ---~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el-~lPViIH~-r--~a~~d~l~iLk~~-~~~~~~~~-v 170 (487)
...++.+|||||||+. ..+.|+++|++|+++|+++ ++||+||+ | ++..+++++|++. +... .++ +
T Consensus 154 i~~t~vkag~IGEiGld~~-----~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~-~~vvi 227 (365)
T 3rhg_A 154 IDGTDIRAGMIGEIGVSPF-----FTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCDP-AKISL 227 (365)
T ss_dssp STTSSCCCCEEEEEECCTT-----CCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCCG-GGEEE
T ss_pred cccCCceeEEEEEEEcCCC-----CCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCCC-CceEE
Confidence 1235567999999963 3489999999999999999 99999998 8 8999999999887 5432 244 4
Q ss_pred EEec-C-CCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhh
Q psy4448 171 IHSF-D-GTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPA 248 (487)
Q Consensus 171 ~H~F-s-G~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~ 248 (487)
.||| + ++.+++++++++
T Consensus 228 ~H~~rs~~~~e~a~~~l~~------------------------------------------------------------- 246 (365)
T 3rhg_A 228 AHSDPSGKDIDYQCKMLDR------------------------------------------------------------- 246 (365)
T ss_dssp SCCGGGTTCHHHHHHHHHT-------------------------------------------------------------
T ss_pred ecCCCCCCCHHHHHHHHhC-------------------------------------------------------------
Confidence 5999 7 999999999988
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCccccccccc----------chh-hHHH
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK----------TKE-NLET 317 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k----------~~~-~~e~ 317 (487)
|+|+||+|.. ...+++ +.+ .+++
T Consensus 247 --------------------------------------------G~~I~~~g~g--~~~tf~~~~~~~~d~~~a~~l~~l 280 (365)
T 3rhg_A 247 --------------------------------------------GVWLEFDMIG--LDISFPKEGAAPSVMDTVEAVATL 280 (365)
T ss_dssp --------------------------------------------TCEEEECCTT--CCCBCSSSCBCCCHHHHHHHHHHH
T ss_pred --------------------------------------------CCEEEecCCC--ccccccccccccchHHHHHHHHHH
Confidence 4599999841 012342 122 2478
Q ss_pred hhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHH
Q psy4448 318 VKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIH 397 (487)
Q Consensus 318 v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~ 397 (487)
++.+|+||||||||+||+.+.|. +|+ |.|.++..++..+++++|++.++++++++
T Consensus 281 i~~g~~drilleTD~p~l~~~~~------------------------~G~-~~~~~l~~~~~~~~~~~Gis~e~i~~~~~ 335 (365)
T 3rhg_A 281 IERGYGNQIVLSHDVFLKQMWAK------------------------NGG-NGWGFVPNVFLSLLAQRGIDKTIIDKLCI 335 (365)
T ss_dssp HHTTCGGGEEECCCCCSGGGSGG------------------------GTS-CTTTHHHHTHHHHHHHTTCCHHHHHHHTT
T ss_pred HHhCCCCcEEEeCCCCCCCCCCc------------------------CCC-CCchhHHHHHHHHHHHcCCCHHHHHHHHH
Confidence 99999999999999999654432 254 88999999999999999999999999999
Q ss_pred HHHHHhcCCCCCC
Q psy4448 398 QNTLRLFFPHELP 410 (487)
Q Consensus 398 ~N~~rlf~~~~~~ 410 (487)
+|..|+|++...+
T Consensus 336 ~Np~rlf~l~~~~ 348 (365)
T 3rhg_A 336 DNPANLLAAENLY 348 (365)
T ss_dssp HHHHHHHHSCCSS
T ss_pred HHHHHHHCCCCcc
Confidence 9999999887444
No 18
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=99.97 E-value=3e-30 Score=255.18 Aligned_cols=261 Identities=12% Similarity=0.101 Sum_probs=184.5
Q ss_pred cEEEecccCCCcc--cccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC-H-HhHHHHHHHHhcCC-CeEEEeec--
Q psy4448 2 KYIDIGANLKDAM--YEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN-V-EDSISSLKLAQSDE-RLYSTVGC-- 74 (487)
Q Consensus 2 ~~iD~H~HL~~~~--f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~-~-~~~~~~~~la~~~~-~v~~avGi-- 74 (487)
.+||+|||+.... |. ...+..........+.++++.++||+.++.++++ . .+++.+.+++++++ ++++++|+
T Consensus 6 G~iD~H~Hl~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~Gv~~iv~~~~~~~~~~~~~~~~~~~~~~~~v~~~~G~~~ 84 (291)
T 1bf6_A 6 GYTLAHEHLHIDLSGFK-NNVDCRLDQYAFICQEMNDLMTRGVRNVIEMTNRYMGRNAQFMLDVMRETGINVVACTGYYQ 84 (291)
T ss_dssp SEEEEEECSSEECHHHH-TCGGGEECCHHHHHHHHHHHHHTTEEEEEECCCGGGTCCHHHHHHHHHHHCCEEEEEECCCC
T ss_pred ceeeeccCeecCCcccc-cCCCcccCCHHHHHHHHHHHHHcCCCEEEecCCCcCCCCHHHHHHHHHhcCCeEEEeecccc
Confidence 3799999997421 10 0000000001123447788889999999998875 4 35888888888886 79999999
Q ss_pred ---CCCCCCCcCCCchhhH-HHHHHHHHh----cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEE
Q psy4448 75 ---HPTRCSEFENDPEGYL-QSLDKIIKE----GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLH 146 (487)
Q Consensus 75 ---HP~~~~~~~~~~~~~l-~~L~~ll~~----~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH 146 (487)
||+++.... .+.+ +.+.+.+.. ...++++||||||||+. ..+.|+++|++|+++|+++++||++|
T Consensus 85 ~~~hP~~~~~~~---~~~l~~~~~~~l~~gi~~~~~~~~~iGe~gld~~~----~~~~~~~~~~~~~~~a~~~~~pv~iH 157 (291)
T 1bf6_A 85 DAFFPEHVATRS---VQELAQEMVDEIEQGIDGTELKAGIIAEIGTSEGK----ITPLEEKVFIAAALAHNQTGRPISTH 157 (291)
T ss_dssp GGGCCTHHHHSC---HHHHHHHHHHHHHTCSTTSSCCEEEEEEEECBTTB----CCHHHHHHHHHHHHHHHHHCCCEEEE
T ss_pred CccCcHhhhcCC---HHHHHHHHHHHHHhccCCcCcceeeEEEEecCCCC----CCHHHHHHHHHHHHHHHHHCCeEEEe
Confidence 998765431 1222 344444432 11368999999999753 24789999999999999999999999
Q ss_pred e---cCchHHHHHHHHHhCCCCCCc-EEEEe-cCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccc
Q psy4448 147 C---RNAKSDFIEIMKEYAPKLPRK-GVIHS-FDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFA 221 (487)
Q Consensus 147 ~---r~a~~d~l~iLk~~~~~~~~~-~v~H~-FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~ 221 (487)
+ +.+. +++++|++.+... .+ +|.|| |+++.+.+++++++
T Consensus 158 ~~~~~~~~-~~~~~l~~~~~~~-~~~~i~H~~~~~~~~~~~~~~~~---------------------------------- 201 (291)
T 1bf6_A 158 TSFSTMGL-EQLALLQAHGVDL-SRVTVGHCDLKDNLDNILKMIDL---------------------------------- 201 (291)
T ss_dssp CGGGCSHH-HHHHHHHHTTCCG-GGEEECCCCSSCCHHHHHHHHHT----------------------------------
T ss_pred CCCCCChH-HHHHHHHHcCCCc-hhEEEECCCCCCCHHHHHHHHHC----------------------------------
Confidence 9 4444 8899998865321 24 67899 56899998888776
Q ss_pred hhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 222 YIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
|+|++|+|.
T Consensus 202 -----------------------------------------------------------------------G~~i~~~~~ 210 (291)
T 1bf6_A 202 -----------------------------------------------------------------------GAYVQFDTI 210 (291)
T ss_dssp -----------------------------------------------------------------------TCEEEECCT
T ss_pred -----------------------------------------------------------------------CCEEEEccC
Confidence 458888873
Q ss_pred ccccccccc---ch-hhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccH-HH
Q psy4448 302 PFQAVDSLK---TK-ENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANI-VQ 376 (487)
Q Consensus 302 ~~~~~~~~k---~~-~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l-~~ 376 (487)
... .+.+ +. ..+++++..|+||||+|||+|+..+.+. +++ |.|.++ ..
T Consensus 211 ~~~--~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~~~~~~~------------------------~~~-~~~~~~~~~ 263 (291)
T 1bf6_A 211 GKN--SYYPDEKRIAMLHALRDRGLLNRVMLSMDITRRSHLKA------------------------NGG-YGYDYLLTT 263 (291)
T ss_dssp TCT--TTSCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSGG------------------------GTS-CCTTHHHHT
T ss_pred ccc--CCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCCCccchh------------------------cCC-CCHHHHHHH
Confidence 100 0122 11 2347899999999999999998422110 244 888885 77
Q ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHhcC
Q psy4448 377 ILEIVAAVRGVEREKLGPIIHQNTLRLFF 405 (487)
Q Consensus 377 v~~~iA~ikg~~~~~va~~~~~N~~rlf~ 405 (487)
+++.+ ..+|++.+++.+++++|+.|||+
T Consensus 264 ~~~~l-~~~g~~~~~~~~~~~~N~~rl~~ 291 (291)
T 1bf6_A 264 FIPQL-RQSGFSQADVDVMLRENPSQFFQ 291 (291)
T ss_dssp HHHHH-HHTTCCHHHHHHHHTHHHHHHCC
T ss_pred HHHHH-HHcCCCHHHHHHHHHHhHHHHhC
Confidence 88888 67899999999999999999985
No 19
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=99.95 E-value=3.6e-27 Score=232.11 Aligned_cols=223 Identities=18% Similarity=0.233 Sum_probs=172.9
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHH----------------------------
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVE---------------------------- 53 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~---------------------------- 53 (487)
|+||+|||+.. +.+++++++.++||++++++++++.
T Consensus 3 m~iD~H~Hl~~----------------~~~~~l~~m~~~Gv~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 66 (272)
T 3cjp_A 3 LIIDGHTHVIL----------------PVEKHIKIMDEAGVDKTILFSTSIHPETAVNLRDVKKEMKKLNDVVNGKTNSM 66 (272)
T ss_dssp CCEEEEEECCS----------------SHHHHHHHHHHHTCCEEEEECCSCCGGGCCSHHHHHHHHHHHHHHHTTSSTTC
T ss_pred eEEEehhhcCC----------------CHHHHHHHHHHcCCCEEEEeCCCCCccccchhhhhhhhhhcccccccCCchhh
Confidence 58999999975 3478899999999999999887654
Q ss_pred ------hHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHH
Q psy4448 54 ------DSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLK 127 (487)
Q Consensus 54 ------~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~ 127 (487)
+++.+.++++++|..+.++|+||+.... ++.+++|++++.+ .+++||||+|+|. + |.+
T Consensus 67 ~~~~~~~n~~~~~~~~~~p~~~~~~g~~p~~~~~-----~~~~~el~~~~~~--~g~~gi~~~g~~~--------~-~~~ 130 (272)
T 3cjp_A 67 IDVRRNSIKELTNVIQAYPSRYVGFGNVPVGLSE-----NDTNSYIEENIVN--NKLVGIGELTPAS--------G-QIK 130 (272)
T ss_dssp HHHHHHHHHHHHHHHHHSTTTEEEEECCCTTCCH-----HHHHHHHHHHTTT--TTCSEEEEECCCT--------T-CGG
T ss_pred HHHHHhhHHHHHHHHHhCCCeEEEEEEeCCCCCc-----HHHHHHHHHHHHh--cCceEEEecCCCC--------C-ccH
Confidence 6788899999999999999999987531 2456788887765 5799999999982 3 888
Q ss_pred HHHHHHHHhhhC-CCCEEEEec-----CchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCc
Q psy4448 128 YFRKQLDLSVTH-KLPLFLHCR-----NAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDR 201 (487)
Q Consensus 128 vF~~qL~LA~el-~lPViIH~r-----~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~dr 201 (487)
.|+.++++|.++ ++||+||++ ++..++.+++++++. .+ ++|++.|+..... .
T Consensus 131 ~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p~---l~-iv~~H~G~~~~~~-~----------------- 188 (272)
T 3cjp_A 131 SLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFPK---VP-VILGHMGGSNWMT-A----------------- 188 (272)
T ss_dssp GGHHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHSTT---SC-EEEGGGGGGGHHH-H-----------------
T ss_pred HHHHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCCC---ce-EEEECCCCccHHH-H-----------------
Confidence 999999999999 999999999 477899999999853 23 8899988753211 1
Q ss_pred eeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHH
Q psy4448 202 LLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEI 281 (487)
Q Consensus 202 iLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~i 281 (487)
+++
T Consensus 189 -----------------------------------------------------------------------------~~~ 191 (272)
T 3cjp_A 189 -----------------------------------------------------------------------------VEL 191 (272)
T ss_dssp -----------------------------------------------------------------------------HHH
T ss_pred -----------------------------------------------------------------------------HHH
Confidence 112
Q ss_pred HHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCC
Q psy4448 282 MKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKP 361 (487)
Q Consensus 282 l~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~ 361 (487)
++++ .|+|+++||. .+. ....++++.+| ||||+|||.||+.+.
T Consensus 192 ~~~~------~~~y~~~s~~-----~~~--~~~~~~~~~~~-dril~gSD~P~~~~~----------------------- 234 (272)
T 3cjp_A 192 AKEI------QNLYLDTSAY-----FST--FVLKIVINELP-LKCIFGTDMPFGDLQ----------------------- 234 (272)
T ss_dssp HHHC------TTEEEECTTC-----SCH--HHHHHHHHHST-TTEECCCCTTSSCHH-----------------------
T ss_pred HHhC------CCEEEEeccc-----ccH--HHHHHHHHhCC-CeEEEeCCCCCCChH-----------------------
Confidence 2221 3689999994 222 23457899999 999999999984211
Q ss_pred ccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 362 DKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 362 ~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
...+.++. .+++.+++.+++++|+.|||++.
T Consensus 235 --------------~~~~~~~~-~~l~~~~~~~i~~~Na~rl~~l~ 265 (272)
T 3cjp_A 235 --------------LSIEAIKK-MSNDSYVANAVLGDNISRLLNIE 265 (272)
T ss_dssp --------------HHHHHHHH-HCSSHHHHHHHHTHHHHHHHTC-
T ss_pred --------------HHHHHHHh-cCCCHHHHHHHHHHHHHHHhCcc
Confidence 12233444 69999999999999999999886
No 20
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=99.94 E-value=4.2e-26 Score=228.24 Aligned_cols=254 Identities=14% Similarity=0.098 Sum_probs=180.2
Q ss_pred CcEEEecccCCCcccccccccCCCC-CCCCHHHHHHHHHhcCCCEEEEECCCH--HhHHHHHHHHhcCC-CeEEEeecCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQK-HEPDIDHVLNRAWNAGLEKIIVTGTNV--EDSISSLKLAQSDE-RLYSTVGCHP 76 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~-~~~d~~~vl~ra~~~GV~~ii~v~~~~--~~~~~~~~la~~~~-~v~~avGiHP 76 (487)
||+||+|||+.+..|.-..++.-.. ...++++++++++++||+++|+++.+. .+.+.++++++++| .++.++|+||
T Consensus 25 ~~~iDtH~Hl~~~~~p~~~~~~~~p~~~~~~e~~l~~~~~~GV~~~V~v~~~~~~~~n~~~~~~~~~~p~r~~g~~~v~P 104 (294)
T 4i6k_A 25 MNCIDTHAHVFSTQDHSIETARYAPDYEATVQSFISHLDEHNFTHGVLVQPSFLGTNNQAMLNAIQQYPDRLKGIAVVQH 104 (294)
T ss_dssp CCSEEEEECCBCTTSCCCTTCSCCCCSCBCHHHHHHHHHHTTCCEEEEECCGGGTTCCHHHHHHHHHSTTTEEEEECCCT
T ss_pred CCceEeeeEeecCCCCCCCCCCCCCCCCCCHHHHHHHHHHcCCCeEEEecCcccccchHHHHHHHHHCCCeEEEEEEeCC
Confidence 6899999999987662111111111 146899999999999999999998766 34566888888987 5888899999
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch-HHHH
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK-SDFI 155 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~-~d~l 155 (487)
... .++|+++.. .+++||| ++++. ....+.|...|+.++++|.++|+||+||++.+. .++.
T Consensus 105 ~~~----------~~eL~~l~~---~gv~Gi~---l~~~~--~~~~~~~~~~~~~~~~~a~~~glpv~iH~~~~~l~~~~ 166 (294)
T 4i6k_A 105 TTT----------FNELVNLKA---QGIVGVR---LNLFG--LNLPALNTPDWQKFLRNVESLNWQVELHAPPKYLVQLL 166 (294)
T ss_dssp TCC----------HHHHHHHHT---TTEEEEE---EECTT--SCCCCSSSHHHHHHHHHHHHTTCEEEEECCHHHHHHHH
T ss_pred ccc----------HHHHHHHHH---CCCcEEE---eccCC--CCCCCcccHHHHHHHHHHHHcCCEEEEeeCcchHHHHH
Confidence 531 145666543 3789987 55542 222345889999999999999999999999886 7888
Q ss_pred HHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhcc
Q psy4448 156 EIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQW 235 (487)
Q Consensus 156 ~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~ 235 (487)
+++++++ .++|+|||++... .. +. +.
T Consensus 167 ~~l~~~p----~~~Vi~H~g~p~~------~~--g~---------------~~--------------------------- 192 (294)
T 4i6k_A 167 PQLNEYS----FDVVIDHFGRVDP------VK--GI---------------ED--------------------------- 192 (294)
T ss_dssp HHHTTSS----SCEEESGGGCCCT------TT--CT---------------TC---------------------------
T ss_pred HHHHHCC----CCEEEECCCCCCC------CC--CC---------------CC---------------------------
Confidence 8888764 3799999987521 00 00 00
Q ss_pred CCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccch---
Q psy4448 236 KPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK--- 312 (487)
Q Consensus 236 ~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~--- 312 (487)
.+|+..+++|+ ..++|+++||. .++++.
T Consensus 193 ---------------~~~~~~~~l~~-----------------------------~~nv~~k~Sg~-----~~~~~~~~~ 223 (294)
T 4i6k_A 193 ---------------PDYQKFLSLLN-----------------------------VKQHWIKVSGF-----YRLGATPSN 223 (294)
T ss_dssp ---------------HHHHHHHHHCC-----------------------------TTTEEEECCCG-----GGSSSTTHH
T ss_pred ---------------HHHHHHHHHHh-----------------------------CCCEEEEeccc-----ccccccCCC
Confidence 01111122211 12689999994 344321
Q ss_pred ------hhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhC
Q psy4448 313 ------ENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRG 386 (487)
Q Consensus 313 ------~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg 386 (487)
...++++.+|.||||++||.|++.+. ++|.+.. +++.++++ +
T Consensus 224 ~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~------------------------------~~~~y~~-~~~~l~~~-~ 271 (294)
T 4i6k_A 224 INIAQQAYNIFKEKGFLHKLIWGSDWPHTQHE------------------------------SLITYED-AIKAFKQI-V 271 (294)
T ss_dssp HHHHHHHHHHHHHHTCGGGEECCCCBTCTTCT------------------------------TTCCHHH-HHHHHHHH-C
T ss_pred chhhHHHHHHHHHHhCcccEEEeCCCCCCCCc------------------------------CCCCHHH-HHHHHHHH-C
Confidence 22378899999999999999996432 1466655 78888887 5
Q ss_pred CCHHHHHHHHHHHHHHhcCCC
Q psy4448 387 VEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 387 ~~~~~va~~~~~N~~rlf~~~ 407 (487)
++.++..+++++|+.|||+++
T Consensus 272 ~~~~~~~~i~~~NA~rl~~l~ 292 (294)
T 4i6k_A 272 FDKHEQCLILNQNPTELFGFS 292 (294)
T ss_dssp CCHHHHHHHHTHHHHHHHTC-
T ss_pred CCHHHHHHHHHHCHHHHhCCC
Confidence 999999999999999999985
No 21
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=99.93 E-value=5.8e-26 Score=231.60 Aligned_cols=236 Identities=19% Similarity=0.185 Sum_probs=162.9
Q ss_pred HHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-CeEEEeecCCCCCC------CcC------CCchhh-----HHH
Q psy4448 33 VLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE-RLYSTVGCHPTRCS------EFE------NDPEGY-----LQS 92 (487)
Q Consensus 33 vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~-~v~~avGiHP~~~~------~~~------~~~~~~-----l~~ 92 (487)
-+.+++++|+..+|-++.. -.+...+.+++++-+ +|+++-|+|...-. .+. .....| .++
T Consensus 51 el~~~~~~G~~tiVd~t~~~~gR~~~~l~~is~~tgv~iv~~TG~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 130 (330)
T 3pnz_A 51 DVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWDGKIKPELKPIIGDFETYYEWIENTTTDK 130 (330)
T ss_dssp HHHHHHHTTCCEEEECCCGGGCBCHHHHHHHHHHHCCEEEEEEECCCGGGGGSBCCGGGHHHHCSCSBHHHHHHTSCHHH
T ss_pred HHHHHHHhCCCEEEECCCCccccCHHHHHHHHHHhCCEEEEeCCCCccccccccccccccccccccccCchhhccCCHHH
Confidence 3456788999998876541 123334555555544 79999999973210 000 000011 223
Q ss_pred HHHHH----Hh--cCCCEE-EEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC--chHHHHHHHHHhCC
Q psy4448 93 LDKII----KE--GGKKVV-AFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN--AKSDFIEIMKEYAP 163 (487)
Q Consensus 93 L~~ll----~~--~~~~vv-aIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~--a~~d~l~iLk~~~~ 163 (487)
|.+++ .+ ....+. +|+||||||+. ..+.|+++|++|+++|+++++||+||+|+ +..+.+++|++.+.
T Consensus 131 l~~~~~~ei~~Gi~~t~vkaGvIEiGld~~~----~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e~~~ 206 (330)
T 3pnz_A 131 LTEFVVNEVENGLEGTPYKAGQVKFGTGYNM----ITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENI 206 (330)
T ss_dssp HHHHHHHHHHTCSTTSSCCEEEEEEECBTTB----CCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhhCCCcCcCcCeEEEEcCCCC----CCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHHcCC
Confidence 32222 21 112344 46699999853 46899999999999999999999999996 33346999998865
Q ss_pred CCCCcEEE-Eec-CCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCcccc
Q psy4448 164 KLPRKGVI-HSF-DGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMV 241 (487)
Q Consensus 164 ~~~~~~v~-H~F-sG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (487)
.. .++++ ||| +++.+.+++++++
T Consensus 207 ~~-~~vvi~H~~~s~~~e~a~~~l~~------------------------------------------------------ 231 (330)
T 3pnz_A 207 PL-EYLSIGHMDRNLDPYYHKQVAKT------------------------------------------------------ 231 (330)
T ss_dssp CG-GGEEETTGGGSCCHHHHHHHHTT------------------------------------------------------
T ss_pred CC-CeEEEecCCCCCCHHHHHHHHHc------------------------------------------------------
Confidence 33 35555 997 9999999999887
Q ss_pred CCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccc---cch----hh
Q psy4448 242 KSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL---KTK----EN 314 (487)
Q Consensus 242 ~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~---k~~----~~ 314 (487)
|+|+||+|. .++ +.. ..
T Consensus 232 ---------------------------------------------------G~~i~~~g~-----~t~~~~~~~~~~~~l 255 (330)
T 3pnz_A 232 ---------------------------------------------------GAFMSFDGI-----AKIKYAPESARIAAI 255 (330)
T ss_dssp ---------------------------------------------------TCEEEECCT-----TCTTTCCHHHHHHHH
T ss_pred ---------------------------------------------------CcEEEEccC-----cccCCCChHHHHHHH
Confidence 459999994 222 111 12
Q ss_pred HHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccH-HHHHHHH---HHhhCCCHH
Q psy4448 315 LETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANI-VQILEIV---AAVRGVERE 390 (487)
Q Consensus 315 ~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l-~~v~~~i---A~ikg~~~~ 390 (487)
+++++..|+||||+|||+||..+.+. .|+.+.+.++ ..++..+ |+++|++.+
T Consensus 256 ~~lv~~g~~drilleTD~p~~~~~~~------------------------~G~~~~~~~~~~~~~~~l~~~a~~~Gis~e 311 (330)
T 3pnz_A 256 LYLVSEGFEDQILVSGDTARKTYYKH------------------------YGHGPGLEYIAKKWVPRFIDEANEKGFDGE 311 (330)
T ss_dssp HHHHHTTCGGGEEECCCCCSGGGSHH------------------------HHCCSTTTHHHHTHHHHHHHHHHHTTSCHH
T ss_pred HHHHHcCCCCeEEEeCCCCCCCCCCc------------------------cCCCCCcchHHHHHHHHHHHHHHHcCCCHH
Confidence 47888999999999999998321110 1445677777 5677787 799999999
Q ss_pred H-HHHHHHHHHHHhcCCC
Q psy4448 391 K-LGPIIHQNTLRLFFPH 407 (487)
Q Consensus 391 ~-va~~~~~N~~rlf~~~ 407 (487)
+ +++++++|+.|+|++.
T Consensus 312 e~i~~~t~~Np~rlf~l~ 329 (330)
T 3pnz_A 312 KLVKKFFVDNPARCFTFK 329 (330)
T ss_dssp HHHHHHHTHHHHHHSSCC
T ss_pred HHHHHHHHHhHHHHhcCC
Confidence 8 9999999999999874
No 22
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=99.93 E-value=8.1e-26 Score=225.31 Aligned_cols=256 Identities=13% Similarity=0.075 Sum_probs=178.8
Q ss_pred CcEEEecccCCCccccccc--------ccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC---------------HHhHHH
Q psy4448 1 MKYIDIGANLKDAMYEGFY--------SSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN---------------VEDSIS 57 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~--------~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~---------------~~~~~~ 57 (487)
|++||+|||+..+.|.... .| ......+++++++++.++||++.|++++. ...++.
T Consensus 1 m~~ID~H~H~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~n~~ 79 (307)
T 2f6k_A 1 MSKIDFHTHYLPTSYVEALKRHVPGDPDG-WPTPEWTPQLTLNFMRDNDISYSILSLSSPHVNFGDKAETIRLVEAANDD 79 (307)
T ss_dssp -CEEEEEEECCCHHHHHHHHHHCCSSGGG-SCCCCCCHHHHHHHHHHTTEEEEEEECCSSCSCSSCHHHHHHHHHHHHHH
T ss_pred CCeEEEecCcCCHHHHHHHHHhccCCccc-CcCCCCCHHHHHHHHHHcCCCEEEEeCCCcccccCCHHHHHHHHHHHHHH
Confidence 8999999999987652100 00 00023689999999999999998887653 245677
Q ss_pred HHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhh
Q psy4448 58 SLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSV 137 (487)
Q Consensus 58 ~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~ 137 (487)
+.++++++|..+.++|+||... .+..+++|++++.+ .+++|| |+|+|+.. ...+...|+.++++|.
T Consensus 80 ~~~~~~~~p~r~~~~~~~p~~~------~~~~~~el~~~~~~--~g~~gi-~~~~~~~~-----~~~~~~~~~~~~~~a~ 145 (307)
T 2f6k_A 80 GKSLAQQYPDQLGYLASLPIPY------ELDAVKTVQQALDQ--DGALGV-TVPTNSRG-----LYFGSPVLERVYQELD 145 (307)
T ss_dssp HHHHHHHCTTTEEEEECCCTTC------HHHHHHHHHHHHHT--SCCSEE-EEESEETT-----EETTCGGGHHHHHHHH
T ss_pred HHHHHHhCccceeEEEeCCCCC------HHHHHHHHHHHHhc--cCCcEE-EEeccCCC-----CCCCcHhHHHHHHHHH
Confidence 8888999999899999999431 23557889988875 579999 99999743 1224478999999999
Q ss_pred hCCCCEEEEecCchHH---------------------------HHHHHHHhCCCCCCcEEEEecCCCHHH-HHHHHcCcc
Q psy4448 138 THKLPLFLHCRNAKSD---------------------------FIEIMKEYAPKLPRKGVIHSFDGTPFQ-AVDSLKTKE 189 (487)
Q Consensus 138 el~lPViIH~r~a~~d---------------------------~l~iLk~~~~~~~~~~v~H~FsG~~~~-a~~~l~~~~ 189 (487)
++++||+||++.+..+ +.+++++++. .++|+++++|.... ..++ +.
T Consensus 146 ~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~P~---l~~v~~H~gg~~p~~~~~~-~~-- 219 (307)
T 2f6k_A 146 ARQAIVALHPNEPAILPKNVDIDLPVPLLGFFMDTTMTFINMLKYHFFEKYPN---IKVIIPHAGAFLGIVDDRI-AQ-- 219 (307)
T ss_dssp TTTCEEEEECCCCSCCCTTSSTTCCHHHHHHHHHHHHHHHHHHHTTHHHHCTT---CEEEESGGGTTHHHHHHHH-HH--
T ss_pred HcCCeEEECCCCCccccccccccccchhccchHHHHHHHHHHHhcCccccCCC---CeEEccCCCccchhhHHHH-Hh--
Confidence 9999999999976531 1247787753 36788777776322 2111 10
Q ss_pred chhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEE
Q psy4448 190 NLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFL 269 (487)
Q Consensus 190 g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~i 269 (487)
. + .
T Consensus 220 -~---~----------~--------------------------------------------------------------- 222 (307)
T 2f6k_A 220 -Y---A----------Q--------------------------------------------------------------- 222 (307)
T ss_dssp -H---H----------H---------------------------------------------------------------
T ss_pred -h---c----------c---------------------------------------------------------------
Confidence 0 0 0
Q ss_pred EeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhh
Q psy4448 270 HCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRT 349 (487)
Q Consensus 270 H~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~ 349 (487)
.....++.+.++ ++|+++||.. + .....++++.+|.||||+|||.||+.
T Consensus 223 --~~~~~~~~~~~~---------n~y~~~s~~~-----~--~~~l~~~~~~~g~drll~gSD~P~~~------------- 271 (307)
T 2f6k_A 223 --KVYQVDVYDVMH---------HVYFDVAGAV-----L--PRQLPTLMSLAQPEHLLYGSDIPYTP------------- 271 (307)
T ss_dssp --HHHCCCHHHHHH---------HSEEECCSSC-----T--TTHHHHHTTTSCGGGEECCCCTTTSC-------------
T ss_pred --ccCcccHHHHHh---------heEEeccCCC-----C--HHHHHHHHHhcCcccEEEecCCCCCC-------------
Confidence 000001122222 5799999941 2 23344789999999999999999842
Q ss_pred hhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCC
Q psy4448 350 QHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFP 406 (487)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~ 406 (487)
|..+..+++.++.+++++.+++.+++++|+.|||++
T Consensus 272 ---------------------~~~~~~~~~~l~~~~~l~~~~~~~i~~~Na~rl~~~ 307 (307)
T 2f6k_A 272 ---------------------LDGSRQLGHALATTDLLTNEQKQAIFYDNAHRLLTE 307 (307)
T ss_dssp ---------------------HHHHHHHHHHHHHCTTSCHHHHHHHHTHHHHHHHHC
T ss_pred ---------------------chhHHHHHHHHhhccCCCHHHHHHHHHHHHHHHhCc
Confidence 112456777888888999999999999999999964
No 23
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=99.92 E-value=5.6e-25 Score=226.89 Aligned_cols=269 Identities=16% Similarity=0.148 Sum_probs=179.9
Q ss_pred cEEEecccCCCccccc-ccccCCCCCCCCHHHHH---HHHHhcCCCEEEEECCC--HHhHHHHHHHHhcC----CCeEEE
Q psy4448 2 KYIDIGANLKDAMYEG-FYSSKNQKHEPDIDHVL---NRAWNAGLEKIIVTGTN--VEDSISSLKLAQSD----ERLYST 71 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~-~~~g~~~~~~~d~~~vl---~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~----~~v~~a 71 (487)
-+..+|=|+... +.. .+.. -.....|.+.++ .+++++|+..+|.++.. -.+...+.+++++- -+|+++
T Consensus 21 G~tl~HEHl~~~-~~~~~~~~-~~~~l~d~~~~~~el~~~~~~G~~tiVd~t~~~~GRd~~~l~~is~~t~~~Gv~Iv~~ 98 (363)
T 3ovg_A 21 GITDCHDHFIKN-GGPEVEEH-IDFLMLNVDASIKEFKEFIDRGGSTIVTMDPPNVGRDVLKTLEIANAVKNLGGNVIMS 98 (363)
T ss_dssp CEEEEEECSCBC-SSHHHHHC-GGGCBCCHHHHHHHHHHHHHTTEEEEEECCCTTTTCCHHHHHHHHHHHGGGTCEEEEE
T ss_pred CCceeccceecc-CChhhccC-CcccccCHHHHHHHHHHHHHhCCCeEEEeCCCccCCCHHHHHHHHHhcccCCcEEEEe
Confidence 367889998532 100 0000 000013445444 44668999988877542 13445566666653 479999
Q ss_pred eecCCCCC----CCcCCCchhhHHHHHHHH----HhcCC------------CE-EEEEeeCCCCCCCCCCChHHHHHHHH
Q psy4448 72 VGCHPTRC----SEFENDPEGYLQSLDKII----KEGGK------------KV-VAFGEFGLDYDRVQYCPVETQLKYFR 130 (487)
Q Consensus 72 vGiHP~~~----~~~~~~~~~~l~~L~~ll----~~~~~------------~v-vaIGEIGLD~~~~~~~~~e~Q~~vF~ 130 (487)
-|+|...- ..+. .....++|.+++ .+.-+ .+ .+|.+||+||+ ...+.|+++|+
T Consensus 99 TG~y~~~~~~~~~~~~--~~~~~e~l~~~~~~ei~~Gi~~~~~~gp~~~~t~ikaG~ikig~s~~----~~t~~Q~~~f~ 172 (363)
T 3ovg_A 99 TGFHKAKFYDKYSSWL--AVVPTEEIVKMCVAEIEEGMDEYNYNGPVVKRSKAKAGIIKAGTGYG----AIDRLELKALE 172 (363)
T ss_dssp EECCCGGGSCTTTSHH--HHSCHHHHHHHHHHHHHTCCBTTTTSSSCCCBCSCCCCEEEEEEEET----BEEHHHHHHHH
T ss_pred CCCCcCcccccCcHhh--hcCCHHHHHHHHHHHHHhcccccccccccccCCCccCCEEEEEeCCC----CCCHHHHHHHH
Confidence 99985321 0110 000123333322 22111 13 46778999975 35689999999
Q ss_pred HHHHHhhhCCCCEEEEecC---chHHHHHHHHHhCCCCCCcE-EEEec-CCCHHHHHHHH-cCccchhHhhhcCCCceee
Q psy4448 131 KQLDLSVTHKLPLFLHCRN---AKSDFIEIMKEYAPKLPRKG-VIHSF-DGTPFQAVDSL-KTKENLETVKSIPEDRLLL 204 (487)
Q Consensus 131 ~qL~LA~el~lPViIH~r~---a~~d~l~iLk~~~~~~~~~~-v~H~F-sG~~~~a~~~l-~~~~g~e~v~~iP~driLl 204 (487)
+|+++|+++++||+||+|+ +. +++++|++.+... .++ +.||| +++.+++++++ ++
T Consensus 173 aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e~g~~~-~~vvi~H~~~~~~~~~a~~~l~~~----------------- 233 (363)
T 3ovg_A 173 VAARTSILTGCPILVHTQLGTMAL-EVAKHLIGFGANP-DKIQISHLNKNPDKYYYEKVIKET----------------- 233 (363)
T ss_dssp HHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHHHTCCG-GGEEEECGGGSCCHHHHHHHHHHH-----------------
T ss_pred HHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHhcCCCC-CcEEEEcCCCCCCHHHHHHHHHHC-----------------
Confidence 9999999999999999974 66 8999999886533 344 45999 48899999888 76
Q ss_pred ccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHH
Q psy4448 205 ETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 284 (487)
Q Consensus 205 ETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~ 284 (487)
T Consensus 234 -------------------------------------------------------------------------------- 233 (363)
T 3ovg_A 234 -------------------------------------------------------------------------------- 233 (363)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hCCCCCCCcEEEEeeCCccccccccc---c----hhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhh
Q psy4448 285 YAPKLPRKGVIHSFDGTPFQAVDSLK---T----KENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKE 357 (487)
Q Consensus 285 ~~~~~~~~gv~hsfsG~~~~~~~~~k---~----~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~ 357 (487)
|+|+||+|. .+++ . ...+++++.+|+||||+|||+||....+ ....
T Consensus 234 --------G~yI~f~g~-----~~~~~~~~~~ra~~l~~lv~~~p~drILleTDap~~~~l~-------------~~G~- 286 (363)
T 3ovg_A 234 --------GVTLCFDGP-----DRVKYYPDSLLAENIKYLVDKGLQKHITLSLDAGRILYQR-------------NYGL- 286 (363)
T ss_dssp --------CCEEEECCT-----TCTTTCCHHHHHHHHHHHHHTTCGGGEEECCCCCSGGGSH-------------HHHH-
T ss_pred --------CcEEEECCe-----eccccCChhHHHHHHHHHHHhcCCCeEEEeCCCCCCcCCC-------------CCCc-
Confidence 459999994 3221 1 1234789999999999999999742111 0000
Q ss_pred ccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCCC
Q psy4448 358 QWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHEL 409 (487)
Q Consensus 358 ~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~~ 409 (487)
...+++|.|.+|..++..+|+++|++.+++++++++|+.|+|++...
T Consensus 287 -----~~g~~~n~p~~l~~~~~~~a~~rGis~eei~~it~~Np~rlf~l~~~ 333 (363)
T 3ovg_A 287 -----TKGKQTFGLAYLFDRFLPLLKQVGVSKEAIFDILVNNPKRVLAFDEK 333 (363)
T ss_dssp -----HTTEECCCTHHHHHTHHHHHHHHTCCHHHHHHHHTHHHHHHTSCCCC
T ss_pred -----cCCCCCCCccHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHCCCCc
Confidence 00145799999999999999999999999999999999999998643
No 24
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=99.91 E-value=3.7e-24 Score=215.17 Aligned_cols=139 Identities=12% Similarity=0.052 Sum_probs=103.5
Q ss_pred cEEEecccCCCcccccccccCCCCCC---------CCH-HHHHHHHHhcCCCEEEEECCCH----------------HhH
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHE---------PDI-DHVLNRAWNAGLEKIIVTGTNV----------------EDS 55 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~---------~d~-~~vl~ra~~~GV~~ii~v~~~~----------------~~~ 55 (487)
++||+|||+.++.|.....+ ..... .++ +++++++.++||++.|++++++ ..+
T Consensus 3 ~~ID~H~H~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~p~~~~~~d~~~~~~~~~~~n 81 (327)
T 2dvt_A 3 GKVALEEHFAIPETLQDSAG-FVPGDYWKELQHRLLDIQDTRLKLMDAHGIETMILSLNAPAVQAIPDRRKAIEIARRAN 81 (327)
T ss_dssp SEEEEEEEECCHHHHGGGTT-TSCSSHHHHHHHHHHCSSSHHHHHHHHTTEEEEEEEECSSGGGGCCCHHHHHHHHHHHH
T ss_pred CeEEEecccCCHHHHHHHhc-cCCcccccccchhcCChhHHHHHHhhhcCCcEEEEeCCCCcccccCChHHHHHHHHHHH
Confidence 49999999998765321100 00000 155 7899999999999998887654 566
Q ss_pred HHHHHHHhcCCC-eEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCC-CChHHHHHHHHHHH
Q psy4448 56 ISSLKLAQSDER-LYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQY-CPVETQLKYFRKQL 133 (487)
Q Consensus 56 ~~~~~la~~~~~-v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~-~~~e~Q~~vF~~qL 133 (487)
+.+.++++++|. +++++|+||+.. +..+++|++++.+ .+++|| ++|+++..... .....|...|..++
T Consensus 82 ~~~~~~~~~~p~r~~~~~~v~p~~~-------~~~~~el~~~~~~--~g~~gi-~i~~~~~~~~~~~~~~~~~~~~~~~~ 151 (327)
T 2dvt_A 82 DVLAEECAKRPDRFLAFAALPLQDP-------DAATEELQRCVND--LGFVGA-LVNGFSQEGDGQTPLYYDLPQYRPFW 151 (327)
T ss_dssp HHHHHHHHHCTTTEEEEECCCTTSH-------HHHHHHHHHHHHT--TCCCEE-EEESSBCCTTCCSCBCTTSGGGHHHH
T ss_pred HHHHHHHhhCCCceEEEeecCcCCH-------HHHHHHHHHHHhc--CCceEE-EECCCCCCCcccCCCCCCCcchHHHH
Confidence 788888999986 678899999753 2457788888876 579999 89999753100 12456888999999
Q ss_pred HHhhhCCCCEEEEecCch
Q psy4448 134 DLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 134 ~LA~el~lPViIH~r~a~ 151 (487)
++|.++++||+||++.+.
T Consensus 152 ~~a~~~~lpv~iH~~~~~ 169 (327)
T 2dvt_A 152 GEVEKLDVPFYLHPRNPL 169 (327)
T ss_dssp HHHHHHTCCEEEECCCCC
T ss_pred HHHHHcCCeEEECCCCCC
Confidence 999999999999998754
No 25
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=99.91 E-value=3.8e-24 Score=211.78 Aligned_cols=253 Identities=15% Similarity=0.084 Sum_probs=179.4
Q ss_pred CcEEEecccCCCcccccccccCC---CCCCCCHHHHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCCC-eEEEeec
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKN---QKHEPDIDHVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDER-LYSTVGC 74 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~---~~~~~d~~~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~~-v~~avGi 74 (487)
|++||+|||+.++.|. |.+.. -....+++++++.+.++||++.|+++.+ ..+++.++++++++|. +++++|+
T Consensus 12 ~~iID~H~Hl~~~~~~--~~~~~~~~~~~~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~n~~~~~~~~~~p~r~~~~~~v 89 (288)
T 2ffi_A 12 LTAIDSHAHVFSRGLN--LASQRRYAPNYDAPLGDYLGQLRAHGFSHGVLVQPSFLGTDNRYLLSALQTVPGQLRGVVML 89 (288)
T ss_dssp CCCEEBCCCCBCHHHH--HHTTCCSSCCSCBCHHHHHHHHHHTSCCEECCBCCGGGTTCCHHHHHHHHHSTTTBCCBBCC
T ss_pred CCceeecccccCCCCC--CCCcccCCCCCCCCHHHHHHHHHHhCCCeEEEECCccccccHHHHHHHHHHCCCCEEEEEEe
Confidence 6799999999986531 10000 0113588999999999999999888753 4677788999999985 8899999
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc-hHH
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA-KSD 153 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a-~~d 153 (487)
||..+ .++|+++.. .+++|| ++|+++.. ....|...|..++++|.++|+||+||++.+ ..+
T Consensus 90 ~p~~~----------~~el~~~~~---~g~~Gi-~~~~~~~~----~~~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~ 151 (288)
T 2ffi_A 90 ERDVE----------QATLAEMAR---LGVRGV-RLNLMGQD----MPDLTGAQWRPLLERIGEQGWHVELHRQVADIPV 151 (288)
T ss_dssp CSSCC----------HHHHHHHHT---TTCCEE-ECCCSSSC----CCCTTSTTTHHHHHHHHHHTCEEEECSCTTTHHH
T ss_pred CCCCC----------HHHHHHHHH---CCCeEE-EEecccCC----CCCcccHHHHHHHHHHHHCCCeEEEeechhhHHH
Confidence 99643 245666653 368999 99998742 124577899999999999999999999987 478
Q ss_pred HHHHHHHhCCCCCCcEE-EEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhh
Q psy4448 154 FIEIMKEYAPKLPRKGV-IHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKK 232 (487)
Q Consensus 154 ~l~iLk~~~~~~~~~~v-~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~ 232 (487)
+.+++++++ . ++| .||+++.... +. ..|+.
T Consensus 152 ~~~~~~~~p--l--~~vi~H~g~~~~~~---------~~---------------~~~~~--------------------- 182 (288)
T 2ffi_A 152 LVRALQPYG--L--DIVIDHFGRPDARR---------GL---------------GQPGF--------------------- 182 (288)
T ss_dssp HHHHHTTTT--C--CEEESGGGSCCTTS---------CT---------------TCTTH---------------------
T ss_pred HHHHHHHCC--C--CEEEECCCCCCCCC---------CC---------------CChhH---------------------
Confidence 999998875 2 455 4988876310 00 00000
Q ss_pred hccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccc-
Q psy4448 233 EQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT- 311 (487)
Q Consensus 233 ~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~- 311 (487)
+ -+.+.. ...++|+++||. .+...
T Consensus 183 -------------------------------------------~----~~~~l~---~~~n~y~~~sg~-----~~~~~~ 207 (288)
T 2ffi_A 183 -------------------------------------------A----ELLTLS---GRGKVWVKVSGI-----YRLQGS 207 (288)
T ss_dssp -------------------------------------------H----HHTTCC---CCSCEEEEEECG-----GGSSSC
T ss_pred -------------------------------------------H----HHHHHH---hCCCEEEEeCcc-----hhhccc
Confidence 0 000000 013789999994 23222
Q ss_pred ---------hhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHH
Q psy4448 312 ---------KENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVA 382 (487)
Q Consensus 312 ---------~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA 382 (487)
....++++.+|.||||++||.|++.+. |.|.+ ..+++.++
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~~~~------------------------------~~~~~-~~~~~~~~ 256 (288)
T 2ffi_A 208 PEENLAFARQALCALEAHYGAERLMWGSDWPHTQHE------------------------------SEVSF-GSAVEQFE 256 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCTTCT------------------------------TTCCH-HHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHhCCCceEEecCCCCCCCC------------------------------CCCCH-HHHHHHHH
Confidence 123368899999999999999995321 33444 67788888
Q ss_pred HhhCCCHHHHHHHHHHHHHHhcCCCCC
Q psy4448 383 AVRGVEREKLGPIIHQNTLRLFFPHEL 409 (487)
Q Consensus 383 ~ikg~~~~~va~~~~~N~~rlf~~~~~ 409 (487)
++.. +.+++.++++.|+.|||++..+
T Consensus 257 ~~~~-~~~~~~~i~~~NA~rl~~l~~~ 282 (288)
T 2ffi_A 257 ALGC-SAQLRQALLLDTARALFGFELE 282 (288)
T ss_dssp HHCC-CHHHHHHHHTHHHHHHTTCCCC
T ss_pred HHCC-CHHHHHHHHHHCHHHHhCcccc
Confidence 8765 9999999999999999998754
No 26
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=99.89 E-value=6.4e-23 Score=205.07 Aligned_cols=246 Identities=13% Similarity=0.137 Sum_probs=178.1
Q ss_pred CcEEEecccCCCccccccc--------------ccCCC---CCCCCHHHHHHHHHhcCCCEEEEECCCH-----HhHHHH
Q psy4448 1 MKYIDIGANLKDAMYEGFY--------------SSKNQ---KHEPDIDHVLNRAWNAGLEKIIVTGTNV-----EDSISS 58 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~--------------~g~~~---~~~~d~~~vl~ra~~~GV~~ii~v~~~~-----~~~~~~ 58 (487)
||+||+|+|.....|.... -|-.. ....+++++++++.++||++.|+++++. .+++.+
T Consensus 3 ~~~id~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~ 82 (291)
T 3irs_A 3 LKIIDFRLRPPAMGFLNARIYTRPDIRNRFTRQLGFEPAPSAEEKSLELMFEEMAAAGIEQGVCVGRNSSVLGSVSNADV 82 (291)
T ss_dssp CCCEESSBCCSSGGGGGSHHHHCHHHHHHHHHHHTCCCCHHHHHTCHHHHHHHHHHTTCCEEEEECCEETTTEECCHHHH
T ss_pred cceEEEecCCCchHhhccccccccccccchhhccCCCCCCCCCCCCHHHHHHHHHHCCCCEEEEcCCCccccccccHHHH
Confidence 8999999998765553111 02000 1135899999999999999999998864 678889
Q ss_pred HHHHhcCC-CeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhh
Q psy4448 59 LKLAQSDE-RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSV 137 (487)
Q Consensus 59 ~~la~~~~-~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~ 137 (487)
.++++++| .+++++|+||+.. ++.+++|++ +.+ .+++|||+. +++.. .+...|...|..++++|.
T Consensus 83 ~~~~~~~p~r~~~~~~v~p~~~-------~~a~~eL~~-~~~--~g~~Gi~~~-~~~~~---~~~~~~d~~~~~~~~~a~ 148 (291)
T 3irs_A 83 AAVAKAYPDKFHPVGSIEAATR-------KEAMAQMQE-ILD--LGIRIVNLE-PGVWA---TPMHVDDRRLYPLYAFCE 148 (291)
T ss_dssp HHHHHHSTTTEEEEEECCCSSH-------HHHHHHHHH-HHH--TTCCCEEEC-GGGSS---SCCCTTCGGGHHHHHHHH
T ss_pred HHHHHHCCCcEEEEEecCccCH-------HHHHHHHHH-HHh--CCCeEEEEe-CCCCC---CCCCCCCHHHHHHHHHHH
Confidence 99999999 5999999999754 245678888 666 579999998 33211 112235678999999999
Q ss_pred hCCCCEEEEecCc---------hHHHHHHHHHhCCCCCCc-EEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeeccC
Q psy4448 138 THKLPLFLHCRNA---------KSDFIEIMKEYAPKLPRK-GVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETD 207 (487)
Q Consensus 138 el~lPViIH~r~a---------~~d~l~iLk~~~~~~~~~-~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD 207 (487)
++++||+||++.+ ..++.+++++++. .+ ++.|+..+.. ..++++
T Consensus 149 e~glpv~iH~~~~~~~~~~~~~p~~~~~v~~~~P~---l~ivl~H~G~~~~---~~~~~l-------------------- 202 (291)
T 3irs_A 149 DNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDFPD---LTVVSSHGNWPWV---QEIIHV-------------------- 202 (291)
T ss_dssp HTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHCTT---CCEEEEGGGTTCH---HHHHHH--------------------
T ss_pred HcCCeEEEeCCCCCCCCCccCCHHHHHHHHHHCCC---CEEEeecCCcccH---HHHHHH--------------------
Confidence 9999999999985 3678899998854 24 4568653322 222221
Q ss_pred CCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCC
Q psy4448 208 CPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAP 287 (487)
Q Consensus 208 ~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~ 287 (487)
+.+
T Consensus 203 --------------------------------------------------------------------------~~~--- 205 (291)
T 3irs_A 203 --------------------------------------------------------------------------AFR--- 205 (291)
T ss_dssp --------------------------------------------------------------------------HHH---
T ss_pred --------------------------------------------------------------------------HhH---
Confidence 111
Q ss_pred CCCCCcEEEEeeCCccccccc-ccc-hhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCC
Q psy4448 288 KLPRKGVIHSFDGTPFQAVDS-LKT-KENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMV 365 (487)
Q Consensus 288 ~~~~~gv~hsfsG~~~~~~~~-~k~-~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~ 365 (487)
..++|+++||. .+ .+. ..-+++++.+|.||||+|||.||+.+
T Consensus 206 ---~~nvy~~~Sg~-----~~~~~~~~~~~~~~~~~g~drllfgSD~P~~~~---------------------------- 249 (291)
T 3irs_A 206 ---RPNLYLSPDMY-----LYNLPGHADFIQAANSFLADRMLFGTAYPMCPL---------------------------- 249 (291)
T ss_dssp ---CTTEEEECGGG-----GSSSTTHHHHHHHHTTGGGGTBCCCCCBTSSCH----------------------------
T ss_pred ---CCCeEecHHHH-----hccCCCHHHHHHHHHHhCcceEEEecCCCCCCH----------------------------
Confidence 12689999984 22 222 22347889999999999999998421
Q ss_pred CCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCCC
Q psy4448 366 KSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHEL 409 (487)
Q Consensus 366 ~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~~ 409 (487)
..+++.++++ +++.+++.++++.|+.|||++...
T Consensus 250 ---------~~~~~~~~~l-~l~~e~~~~i~~~NA~rl~~~~~~ 283 (291)
T 3irs_A 250 ---------KEYTEWFLTL-PIKPDAMEKILHGNAERLLAQAGR 283 (291)
T ss_dssp ---------HHHHHHHHTS-SCCHHHHHHHHTHHHHHHHHHSCC
T ss_pred ---------HHHHHHHHHC-CCCHHHHHHHHHHHHHHHhCcccc
Confidence 2356677776 999999999999999999987643
No 27
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=99.87 E-value=2.8e-22 Score=206.42 Aligned_cols=237 Identities=16% Similarity=0.159 Sum_probs=163.0
Q ss_pred HHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCC-CeEEEeecCCCCC--CCcCC-C--chhhHHHHHHHHHh------
Q psy4448 34 LNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDE-RLYSTVGCHPTRC--SEFEN-D--PEGYLQSLDKIIKE------ 99 (487)
Q Consensus 34 l~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~-~v~~avGiHP~~~--~~~~~-~--~~~~l~~L~~ll~~------ 99 (487)
++++++.|+..||-++.. -.+...+.+++++-+ +|.++-|+|.+.. ..+.. . .....++|.+++..
T Consensus 89 l~~~k~~Gg~tIVd~T~~g~GRd~~~l~~is~~tGv~IV~~TG~y~~~~~~p~~~~~~~~~~~~~e~l~~~~i~Ei~~Gi 168 (360)
T 3tn4_A 89 AEKMKRHGIQTVVDPTPNDCGRNPAFLRRVAEETGLNIICATGYYYEGEGAPPYFQFRRLLGTAEDDIYDMFMAELTEGI 168 (360)
T ss_dssp HHHHHHTTCCEEEECCCTTTTCCHHHHHHHHHHHCCEEEEEECCCCGGGSCTHHHHHHHHHTCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhcCCCeEEECCCCCcCcCHHHHHHHHHHcCCCEEEeCccccCcccCCcccchhhhcccCHHHHHHHHHHHHHhcc
Confidence 456888999988876541 133444555555544 6899999986421 10000 0 00112444444322
Q ss_pred --cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchH--HHHHHHHHhCCCCCCcEEE-E-e
Q psy4448 100 --GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKS--DFIEIMKEYAPKLPRKGVI-H-S 173 (487)
Q Consensus 100 --~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~--d~l~iLk~~~~~~~~~~v~-H-~ 173 (487)
..-+.-.|||+| ++. ...+.|+++|++|+++|+++++||++|++.+.. +.+++|++.+... .++++ | |
T Consensus 169 ~~tgikaG~I~~~~-~~~----~~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~-~~vvi~H~~ 242 (360)
T 3tn4_A 169 ADTGIKAGVIKLAS-SKG----RITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADP-KKIVIGHMC 242 (360)
T ss_dssp TTSCCCCSEEEEEC-BTT----BCCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCG-GGEEECCGG
T ss_pred ccCCCcceEEEEEc-cCC----CCCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCC-CceEEEcCC
Confidence 111223455554 322 234899999999999999999999999999866 7899999887643 35544 9 8
Q ss_pred cCCCHHHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHH
Q psy4448 174 FDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYF 253 (487)
Q Consensus 174 FsG~~~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F 253 (487)
|+++.+.+++++++
T Consensus 243 ~~~d~~~~~~~l~~------------------------------------------------------------------ 256 (360)
T 3tn4_A 243 DNTDPDYHRKTLAY------------------------------------------------------------------ 256 (360)
T ss_dssp GCCCHHHHHHHHTT------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHc------------------------------------------------------------------
Confidence 99999999999887
Q ss_pred HHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccch----h-hHHHhhhCCCCceEe
Q psy4448 254 RKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTK----E-NLETVKSIPEDRLLL 328 (487)
Q Consensus 254 ~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~----~-~~e~v~~iPldrlLl 328 (487)
|+|+||++.........++. + .+++++..|+|||||
T Consensus 257 ---------------------------------------G~yl~fD~iG~~~~~~~p~d~~r~~~l~~lv~~g~~drILL 297 (360)
T 3tn4_A 257 ---------------------------------------GVYIAFDRFGIQGMVGAPTDEERVRTLLALLRDGYEKQIML 297 (360)
T ss_dssp ---------------------------------------TCEEEECCTTCCCSTTCCCHHHHHHHHHHHHHTTCGGGEEE
T ss_pred ---------------------------------------CCEEEEcccccccccCCCChHHHHHHHHHHHHhcCcceEEE
Confidence 45888886321111112221 1 237889999999999
Q ss_pred ccCC-------CCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhh--CCCHHHHHHHHHHH
Q psy4448 329 ETDC-------PWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVR--GVEREKLGPIIHQN 399 (487)
Q Consensus 329 ETD~-------P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ik--g~~~~~va~~~~~N 399 (487)
|||+ ||..|.|. ++.+|.|.+...+.+.|+.++ |++.+++.+++.+|
T Consensus 298 stDa~~~~~~~py~~p~p~------------------------r~~~~~~~y~~i~~~~ip~L~~~Gvs~e~I~~i~~~N 353 (360)
T 3tn4_A 298 SHDTVNVWLGRPFTLPEPF------------------------AEMMKNWHVEHLFVNIIPALKNEGIRDEVLEQMFIGN 353 (360)
T ss_dssp CCCCEEEESSSCCCCCHHH------------------------HHHTTTCSTTHHHHTHHHHHHHTTCCHHHHHHHHTHH
T ss_pred ecCCCcccccCCCCCcccc------------------------cccCCCCCchhHHHHHHHHHHHcCCCHHHHHHHHHHh
Confidence 9999 77654432 366788999999999999885 89999999999999
Q ss_pred HHHhcC
Q psy4448 400 TLRLFF 405 (487)
Q Consensus 400 ~~rlf~ 405 (487)
.+|+|.
T Consensus 354 P~rlfs 359 (360)
T 3tn4_A 354 PAALFS 359 (360)
T ss_dssp HHHHHC
T ss_pred HHHHhc
Confidence 999984
No 28
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=99.81 E-value=8.9e-19 Score=175.75 Aligned_cols=160 Identities=11% Similarity=0.020 Sum_probs=120.3
Q ss_pred CcEEEecccCCCcccccc-cc-c--CCCCCCCCHHHHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhcCCCeEEEeec
Q psy4448 1 MKYIDIGANLKDAMYEGF-YS-S--KNQKHEPDIDHVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQSDERLYSTVGC 74 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~-~~-g--~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~~~~v~~avGi 74 (487)
||+||+|+|+-++.-..+ |- . ..-...-.+++++++++.+||+++|+++.+ ..+++.++++++++|.++.++|+
T Consensus 3 ~m~iD~H~H~~~~~~~~~pw~~~~~~~~~~~~~~~~ll~~~~~~GV~~~V~v~~~~~~~~n~~l~~la~~~p~~~g~vg~ 82 (303)
T 4do7_A 3 ALRIDSHQHFWRYRAADYPWIGAGMGVLARDYLPDALHPLMHAQALGASIAVQARAGRDETAFLLELACDEARIAAVVGW 82 (303)
T ss_dssp CCCEEEEECCBCCCGGGCTTCCTTCGGGSSCBCHHHHHHHHHHTTCCEEEEECCSSSHHHHHHHHHHHTTCTTEEEEEEC
T ss_pred CcEEeCCEecccCCCCCCCCCCCccccccCCCCHHHHHHHHHhcCCcEEEEEccCCcHHHHHHHHHHHHhCCCeEEEEEE
Confidence 678999999976421000 11 0 011235688999999999999999999886 46788999999999999999995
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCCh-HHHHHHHHHHHHHhhhCCCCEEEEecCch-H
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPV-ETQLKYFRKQLDLSVTHKLPLFLHCRNAK-S 152 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~-e~Q~~vF~~qL~LA~el~lPViIH~r~a~-~ 152 (487)
||.... +..++|+++. + ++++|||+++.. ...+. ..|...|+.++++|.++|+||+||++.+. .
T Consensus 83 v~~~~~-------~~~~~L~~l~-~--~gv~Gir~~~~~----~~~~~~~~~~~~~~~~~~~~~~~glpv~ih~~~~~l~ 148 (303)
T 4do7_A 83 EDLRAP-------QLAERVAEWR-G--TKLRGFRHQLQD----EADVRAFVDDADFARGVAWLQANDYVYDVLVFERQLP 148 (303)
T ss_dssp CCTTCT-------THHHHHTTCC-S--SCEEEEECCGGG----SSCHHHHHHCHHHHHHHHHHHHTTCEEEECCCGGGHH
T ss_pred eCCCCc-------hHHHHHHHHh-h--cCceEEEecCcC----CCCccccccCHHHHHHHHHHHHCCCeEEEecCHHHHH
Confidence 553322 2356777766 4 689999999653 11223 58999999999999999999999999984 8
Q ss_pred HHHHHHHHhCCCCCCcEEEEecCCC
Q psy4448 153 DFIEIMKEYAPKLPRKGVIHSFDGT 177 (487)
Q Consensus 153 d~l~iLk~~~~~~~~~~v~H~FsG~ 177 (487)
++.+++++++. .++|+-++.+.
T Consensus 149 ~l~~ll~~~P~---l~iVi~H~G~p 170 (303)
T 4do7_A 149 DVQAFCARHDA---HWLVLDHAGKP 170 (303)
T ss_dssp HHHHHHHHCCS---SCEEEGGGGCC
T ss_pred HHHHHHHHCCC---CCEEEeCCCCC
Confidence 99999999864 46888666543
No 29
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=99.81 E-value=2.3e-19 Score=183.21 Aligned_cols=236 Identities=14% Similarity=0.135 Sum_probs=158.4
Q ss_pred HHHHHHHhcCCCEEEEECCCH-----------------HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHH
Q psy4448 32 HVLNRAWNAGLEKIIVTGTNV-----------------EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLD 94 (487)
Q Consensus 32 ~vl~ra~~~GV~~ii~v~~~~-----------------~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~ 94 (487)
++++.|.++||+..|++++.+ ..++.+.++++++|..+.++|.||..... +.+..+++|+
T Consensus 53 ~~l~~md~~GV~~~vl~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~rf~~~~~~p~~~~~---~~~~a~~eL~ 129 (350)
T 2gwg_A 53 NQLKKMQERGSDLTVFSPRASFMAHHIGDFNVSSTWAAICNELCYRVSQLFPDNFIGAAMLPQSPGV---DPKTCIPELE 129 (350)
T ss_dssp THHHHHHHHTCCEEEEECCC-------CCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECCCCTTS---CGGGGHHHHH
T ss_pred HHHHHHHHcCCeEEEEcCCchhhccccCCHHHHHHHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCC---CHHHHHHHHH
Confidence 678999999999999887754 45667888899999878889999975321 1235678899
Q ss_pred HHHHhcCCCEEEEEeeCCCC---CCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchH-------------HHH---
Q psy4448 95 KIIKEGGKKVVAFGEFGLDY---DRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKS-------------DFI--- 155 (487)
Q Consensus 95 ~ll~~~~~~vvaIGEIGLD~---~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~-------------d~l--- 155 (487)
+++.+ .+++|| |+|+|+ ++ + ....|...|..++++|.++++||+||++.+.. +++
T Consensus 130 r~~~~--~g~~Gv-~l~~~~~~~~~-~--~~~l~d~~~~p~~~~a~e~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~a~~ 203 (350)
T 2gwg_A 130 KCVKE--YGFVAI-NLNPDPSGGHW-T--SPPLTDRIWYPIYEKMVELEIPAMIHVSTSCNTCFHTTGAHYLNADTTAFM 203 (350)
T ss_dssp HHHHT--SCCCEE-EECSCTTSSCC-C--SCCTTSGGGHHHHHHHHHHTCCEEECCCC---------TTHHHHHHHHHHH
T ss_pred HHHhc--cCCeEE-EECCCCCCccC-C--CCCCCCHHHHHHHHHHHHcCCeEEECCCCCCcccccccccccchHHHHHHH
Confidence 98876 579999 999994 32 1 23467889999999999999999999998653 332
Q ss_pred -----HHHHHhCCCCCCcEEEEecCCCH-HHHHHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchh
Q psy4448 156 -----EIMKEYAPKLPRKGVIHSFDGTP-FQAVDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEK 229 (487)
Q Consensus 156 -----~iLk~~~~~~~~~~v~H~FsG~~-~~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~ 229 (487)
.++++++. . .-++.||+ |+. ..+.++-.
T Consensus 204 ~li~~~v~~~~P~-l-~~vi~H~G-g~~p~~~~r~~~------------------------------------------- 237 (350)
T 2gwg_A 204 QCVAGDLFKDFPE-L-KFVIPHGG-GAVPYHWGRFRG------------------------------------------- 237 (350)
T ss_dssp HHHHSCHHHHCTT-C-CEEESGGG-TTTGGGHHHHHH-------------------------------------------
T ss_pred HHHhcCccccCCC-C-cEEeccCC-CcchhhHHHHHH-------------------------------------------
Confidence 46677653 2 12355765 442 11110000
Q ss_pred hhhhccCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccc
Q psy4448 230 VKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL 309 (487)
Q Consensus 230 ~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~ 309 (487)
++..+..| .+... ...++|++++|.
T Consensus 238 -----------------------------~~~~~~~~--------------~l~~~----~~~n~y~d~s~~-------- 262 (350)
T 2gwg_A 238 -----------------------------LAQEMKKP--------------LLEDH----VLNNIFFDTCVY-------- 262 (350)
T ss_dssp -----------------------------HHHHTTCC--------------CHHHH----TTTTEEEECCCC--------
T ss_pred -----------------------------HHHhccCC--------------CcHHH----HhhcEEEEeccc--------
Confidence 00000000 00000 023689999983
Q ss_pred cchhhHHHhhhCCCCceEeccCCCCCCCC--CCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCC
Q psy4448 310 KTKENLETVKSIPEDRLLLETDCPWCEVK--PSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGV 387 (487)
Q Consensus 310 k~~~~~e~v~~iPldrlLlETD~P~~~~~--p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~ 387 (487)
.......+++.+|.||||++||.||+.+. |. .-.++..+.+.+++++++
T Consensus 263 ~~~~l~~l~~~~g~dril~gSD~P~~~~~~~p~-----------------------------~~~~~~~~~~~l~~~~~l 313 (350)
T 2gwg_A 263 HQPGIDLLNTVIPVDNVLFASEMIGAVRGIDPR-----------------------------TGFYYDDTKRYIEASTIL 313 (350)
T ss_dssp SHHHHHHHHHHSCGGGEECCCCCSSSCCCEETT-----------------------------TTEETTCTHHHHHHCSSS
T ss_pred CcHHHHHHHHHhCcccEEEecCCCCCcccCCcc-----------------------------cccchhhHHHHHHhccCC
Confidence 12233478999999999999999996431 11 013445566777888899
Q ss_pred CHHHHHHHHHHHHHHhcCC
Q psy4448 388 EREKLGPIIHQNTLRLFFP 406 (487)
Q Consensus 388 ~~~~va~~~~~N~~rlf~~ 406 (487)
+.+++.++++.|+.|||++
T Consensus 314 ~~~~~~~i~~~NA~rl~~~ 332 (350)
T 2gwg_A 314 TPEEKQQIYEGNARRVYPR 332 (350)
T ss_dssp CHHHHHHHHTHHHHHHCHH
T ss_pred CHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999964
No 30
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=99.77 E-value=2.3e-18 Score=174.38 Aligned_cols=107 Identities=12% Similarity=0.010 Sum_probs=81.8
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCC--------H--------HhHHHHHHHHhcCCC-eEEEeecCCCCCCCcCCCchhh
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGTN--------V--------EDSISSLKLAQSDER-LYSTVGCHPTRCSEFENDPEGY 89 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~~--------~--------~~~~~~~~la~~~~~-v~~avGiHP~~~~~~~~~~~~~ 89 (487)
.-++++.++.+.++||++.|++++. + ...+.+.++++++|. +.+..++||+.. +..
T Consensus 53 ~~~~~~~l~~m~~~GV~~~v~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~-------~~a 125 (336)
T 2wm1_A 53 CWDPEVRIREMDQKGVTVQALSTVPVMFSYWAKPEDTLNLCQLLNNDLASTVVSYPRRFVGLGTLPMQAP-------ELA 125 (336)
T ss_dssp GTCHHHHHHHHHHHTCCEEEEECCGGGGCTTSCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEECCCTTSH-------HHH
T ss_pred cCCHHHHHHHHHHCCCCEEEECCCchhhcccCCHHHHHHHHHHHHHHHHHHHHhccCceeEEEeCCCcCH-------HHH
Confidence 3468999999999999998887652 3 335677888889997 556557999643 245
Q ss_pred HHHHHHHHHhcCCCEEEE--EeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 90 LQSLDKIIKEGGKKVVAF--GEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 90 l~~L~~ll~~~~~~vvaI--GEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
+++|++++.+ ..++|| |+.+.+++ .|...|..++++|.++++||+||++.+
T Consensus 126 ~~el~~~~~~--~g~~Gv~l~~~~~~~~--------l~d~~~~~~~~~~~e~~lpv~iH~~~~ 178 (336)
T 2wm1_A 126 VKEMERCVKE--LGFPGVQIGTHVNEWD--------LNAQELFPVYAAAERLKCSLFVHPWDM 178 (336)
T ss_dssp HHHHHHHHHT--SCCSEEEEESEETTEE--------TTCGGGHHHHHHHHHHTCEEEEECCSC
T ss_pred HHHHHHHHHc--cCCeEEEECCcCCCCC--------CCCccHHHHHHHHHHcCCEEEECCCCC
Confidence 7788888865 467777 77666543 245689999999999999999999864
No 31
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=99.71 E-value=1.3e-16 Score=161.62 Aligned_cols=105 Identities=10% Similarity=0.084 Sum_probs=79.4
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC--------CH--------HhHHHHHHHHhcCCC-eEEEeecCCCCCCCcCCCchhhH
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT--------NV--------EDSISSLKLAQSDER-LYSTVGCHPTRCSEFENDPEGYL 90 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~--------~~--------~~~~~~~~la~~~~~-v~~avGiHP~~~~~~~~~~~~~l 90 (487)
-+.++.++++.++||++.|++++ ++ ..++.+.++++++|. +.+..++||+.. +...
T Consensus 58 ~~~~~~l~~m~~~GV~~~V~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~l~~~~~-------~~a~ 130 (334)
T 2hbv_A 58 WDPAFRIEEMDAQGVDVQVTCATPVMFGYTWEANKAAQWAERMNDFALEFAAHNPQRIKVLAQVPLQDL-------DLAC 130 (334)
T ss_dssp TCHHHHHHHHHHHTCSEEEEEECGGGCCTTSCHHHHHHHHHHHHHHHHHHHTTCTTTEEECBCCCTTSH-------HHHH
T ss_pred CCHHHHHHHHHHCCCCEEEECCCchhccCCCCHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEecCccCH-------HHHH
Confidence 45899999999999999888754 33 344677888889986 566678999643 2456
Q ss_pred HHHHHHHHhcCCCEEE--EEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 91 QSLDKIIKEGGKKVVA--FGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 91 ~~L~~ll~~~~~~vva--IGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
++|++++.. .+++ ||+.+.+++. +...|..++++|.++++||+||++.+
T Consensus 131 ~el~~~~~~---g~~Gv~l~~~~~~~~l--------~d~~~~p~~~~~~e~~lpv~iH~~~~ 181 (334)
T 2hbv_A 131 KEASRAVAA---GHLGIQIGNHLGDKDL--------DDATLEAFLTHCANEDIPILVHPWDM 181 (334)
T ss_dssp HHHHHHHHH---TCCCEEEESCBTTBCT--------TSHHHHHHHHHHHHTTCCEEEECCSC
T ss_pred HHHHHHHHc---CCeEEEECCCCCCCCC--------CcHHHHHHHHHHHHCCCEEEECCCCC
Confidence 788888843 3444 6777766432 23789999999999999999999875
No 32
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=99.58 E-value=2.4e-14 Score=157.05 Aligned_cols=157 Identities=12% Similarity=0.071 Sum_probs=114.4
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEE------ECCCHHhHHHHHHHHhcCC-CeEEEe-ec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIV------TGTNVEDSISSLKLAQSDE-RLYSTV-GC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~------v~~~~~~~~~~~~la~~~~-~v~~av-Gi 74 (487)
+||+|||+.... .+.++..+++...|++.++. ...+.+.++..++.++..+ +++.++ |+
T Consensus 91 ~ID~H~Hl~~~~-------------~~~~~~~~~al~~GvTtvv~~p~~~~~v~g~~~~~~~l~~a~~~~~~v~~~~p~~ 157 (608)
T 3nqb_A 91 LIDTHMHIESSM-------------ITPAAYAAAVVARGVTTIVWDPHEFGNVHGVDGVRWAAKAIENLPLRAILLAPSC 157 (608)
T ss_dssp EEEEEECGGGGT-------------SCHHHHHHHHHTTTEEEEEECCHHHHHHHTHHHHHHHHHHHTTCSSEEEEEECCC
T ss_pred eEecccCccccc-------------CCHHHHHHHHHhCCeEEEEcCCccccccCCHHHHHHHHHHhhhcCcEEEEecccc
Confidence 899999997532 36778888999999998875 2235677888888887776 588887 99
Q ss_pred CCCC-CCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHH
Q psy4448 75 HPTR-CSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSD 153 (487)
Q Consensus 75 HP~~-~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d 153 (487)
||.- .-+.. ......+.+++++.. ++++++||++ ||. ....|.+.|.+++++|+++++||.+|++.+.++
T Consensus 158 ~P~~~~~~~~-g~~~~~~el~~l~~~--~~v~glgE~~-~~~-----~v~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~~ 228 (608)
T 3nqb_A 158 VPSAPGLERG-GADFDAAILADLLSW--PEIGGIAEIM-NMR-----GVIERDPRMSGIVQAGLAAEKLVCGHARGLKNA 228 (608)
T ss_dssp SSSSTTSCCC-SCCCCHHHHHHHHTS--TTEEEEEEEC-CHH-----HHHTTCHHHHHHHHHHHHHTCEEEECCTTCCHH
T ss_pred CCCCCccccC-cccCCHHHHHHHHhc--cCcceeeEee-ccC-----CcCCCcHHHHHHHHHHHHcCCEEEEcCCCCCHH
Confidence 9972 11111 111235677888765 6899999997 542 123477889999999999999999999999988
Q ss_pred HHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 154 FIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 154 ~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.++.+.+.+. . .-||+... +++.+.++.
T Consensus 229 ~L~~~~~aGv----~-~~H~~~~~-eea~e~l~~ 256 (608)
T 3nqb_A 229 DLNAFMAAGV----S-SDHELVSG-EDLMAKLRA 256 (608)
T ss_dssp HHHHHHHTTC----C-EECCCCSH-HHHHHHHHT
T ss_pred HHHHHHHcCC----C-eeeccCCH-HHHHHHHHC
Confidence 8887766543 2 37877655 666666655
No 33
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=99.41 E-value=4.1e-13 Score=136.36 Aligned_cols=150 Identities=17% Similarity=0.191 Sum_probs=100.7
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC-HHhHHHHHHHHhcCC-CeE-----EEeecC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN-VEDSISSLKLAQSDE-RLY-----STVGCH 75 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~-~~~~~~~~~la~~~~-~v~-----~avGiH 75 (487)
+||+|||+....+. ...+. .+.+...||+.++.+++. +.+++.+.+..++.+ +++ ...|.|
T Consensus 56 ~ID~H~H~~~~~~~---------~~~~~---~~~~~~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~~ 123 (379)
T 2ics_A 56 WIDDHVHCFEKMAL---------YYDYP---DEIGVKKGVTTVIDAGTTGAENIHEFYDLAQQAKTNVFGLVNISKWGIV 123 (379)
T ss_dssp EEEEEECCCTTSSS---------SCCCH---HHHTGGGTEEEEEEESSSCTTTHHHHHHHHHTSSSEEEEEEESSTTTTS
T ss_pred EEEeccccCccCcc---------ccCch---hhhHhhCceeEEEcCCCCCccCHHHHHHHHHhhcccEEEEccccccCCC
Confidence 89999999864210 02222 346678999998877644 777777777777765 343 234888
Q ss_pred CC-CCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhh-CCCCEEEEecC---c
Q psy4448 76 PT-RCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVT-HKLPLFLHCRN---A 150 (487)
Q Consensus 76 P~-~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~e-l~lPViIH~r~---a 150 (487)
|+ ...... +...+.+++++......+.+|++.+.+... . ..+.+.|++++++|++ +++||.+|+.+ +
T Consensus 124 ~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~----~~~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~ 195 (379)
T 2ics_A 124 AQDELADLS---KVQASLVKKAIQELPDFVVGIKARMSRTVI-G----DNGITPLELAKQIQQENQEIPLMVHIGSAPPH 195 (379)
T ss_dssp SSCTTSSGG---GCCHHHHHHHHHHCTTTEEEEEEEESHHHH-T----TCTTHHHHHHHHHHHTTTTCCEEEEECSSSSC
T ss_pred CHHHHHHHH---HHHHHHHHHHHHhhhCcceEEEEecccccc-c----cchHHHHHHHHHHHHHhcCCeEEEeCCCCcch
Confidence 86 332211 123466777776543478999998765311 1 2356788899999999 99999999987 4
Q ss_pred hHHHHHHHHHhCCCCCCcEEEEecCCCH
Q psy4448 151 KSDFIEIMKEYAPKLPRKGVIHSFDGTP 178 (487)
Q Consensus 151 ~~d~l~iLk~~~~~~~~~~v~H~FsG~~ 178 (487)
.++++++++. + ..+.|+|+++.
T Consensus 196 ~~~~~~~~~~-g-----~~~~H~~~~~~ 217 (379)
T 2ics_A 196 LDEILALMEK-G-----DVLTHCFNGKE 217 (379)
T ss_dssp HHHHHHHCCT-T-----CEEESTTCCST
T ss_pred HHHHHHHhhc-C-----CeeeeccCCCc
Confidence 5677776632 1 47899998753
No 34
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=99.34 E-value=6.2e-12 Score=129.28 Aligned_cols=136 Identities=10% Similarity=0.070 Sum_probs=85.2
Q ss_pred CcEEEecccCCCcccc-ccc--ccCCC---------------------CCCCCHHHHHHHHHhcCCCEEEEE-CC-----
Q psy4448 1 MKYIDIGANLKDAMYE-GFY--SSKNQ---------------------KHEPDIDHVLNRAWNAGLEKIIVT-GT----- 50 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~-~~~--~g~~~---------------------~~~~d~~~vl~ra~~~GV~~ii~v-~~----- 50 (487)
|++||+|.|+-.+.+. .++ .++.. ....+.++-++.+.+.||+..|+. +.
T Consensus 22 m~~id~h~H~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~rl~~MD~~GI~~~Vls~~~~~~~~ 101 (357)
T 3nur_A 22 MKSITFEEHYVIEDIQKETMNAISADPKGVPMKVMLEGLEKKTGFTNADELSHHDERIQFMNNQDVQIQVLSYGNGSPSN 101 (357)
T ss_dssp CCEEEEEEEEBCHHHHHHC---------------------------CTTBTTCHHHHHHHHHHTTEEEEEEEECTTCGGG
T ss_pred cceeeeecccCCHHHHHHHHHhcCCCCcccCCcchhhhhhhccCCccccccCCHHHHHHHHHHCCCcEEEEeCCCCcccc
Confidence 8899999999874331 111 11000 012356788999999999886654 22
Q ss_pred -CH--------HhHHHHHHHHhcCCC-eEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCC
Q psy4448 51 -NV--------EDSISSLKLAQSDER-LYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYC 120 (487)
Q Consensus 51 -~~--------~~~~~~~~la~~~~~-v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~ 120 (487)
++ ...+.+.+.++++|. +.+...+.|+.. +...++|++.+.+ ..+++|..-+.-.. ..
T Consensus 102 ~~~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~-------~~a~~El~r~~~~--~G~~Gv~l~~~~~~--~~- 169 (357)
T 3nur_A 102 LVGQKAIELCQKANDQLANYIAQYPNRFVGFATLPINEP-------EAAAREFERCIND--LGFKGALIMGRAQD--GF- 169 (357)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSH-------HHHHHHHHHHHHT--TCCCCEEEESCBTT--BC-
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEeCCCCCH-------HHHHHHHHHHHhh--cCceEEEeCCCCCC--CC-
Confidence 11 234456777888885 666666776542 3457888888765 35667665432110 00
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecCch
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~ 151 (487)
.-...|...++.|.++++||.||+....
T Consensus 170 ---~~d~~~~p~~~~~~e~g~pV~iH~g~~~ 197 (357)
T 3nur_A 170 ---LDQDKYDIIFKTAENLDVPIYLHPAPVN 197 (357)
T ss_dssp ---TTSGGGHHHHHHHHHHTCCEEEECCCCC
T ss_pred ---CCCccHHHHHHHHHhcCCeEEEecCCCC
Confidence 1123578899999999999999997653
No 35
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=99.29 E-value=1.3e-11 Score=124.39 Aligned_cols=135 Identities=16% Similarity=0.118 Sum_probs=82.6
Q ss_pred CcEEEecccCCCcccc-c-------ccccCCCCC---CCCHHHHHHHHHhcCCCEEEEECC-CH--------------Hh
Q psy4448 1 MKYIDIGANLKDAMYE-G-------FYSSKNQKH---EPDIDHVLNRAWNAGLEKIIVTGT-NV--------------ED 54 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~-~-------~~~g~~~~~---~~d~~~vl~ra~~~GV~~ii~v~~-~~--------------~~ 54 (487)
|+.||+|+|+..+.+. . .+.|-.-.. .-|+++-++.+.+.||..+++.+. .+ ..
T Consensus 3 ~~~ID~H~H~~p~~~~~~~~~~~~~~~~~~~~~~~p~~~d~~~rl~~Md~~Gv~~vl~~~~~~~~~~~d~~~~~~~~r~~ 82 (312)
T 3ij6_A 3 LTKIDAYAHILPAKYYQKMLSVEPNIPNMFPFIKIKTLMDLDERLTKWPDQNTKQVISLANISPEDFTDSKTSAELCQSA 82 (312)
T ss_dssp CCEEEEEEEECCHHHHHHHHHHCTTHHHHCGGGGCHHHHCHHHHHHTCSCTTEEEEEEECSCCGGGTSCHHHHHHHHHHH
T ss_pred ceeEEeecccCChHHHHHHHHhCCCCCCCCCCCCCcccCCHHHHHHHHHHcCCeEEEECCCCcccccCCHHHHHHHHHHH
Confidence 6799999999876431 0 010100000 126778888899999976665432 11 13
Q ss_pred HHHHHHHHhcCCCeEE-EeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHH
Q psy4448 55 SISSLKLAQSDERLYS-TVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQL 133 (487)
Q Consensus 55 ~~~~~~la~~~~~v~~-avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL 133 (487)
.+.+.++++++|.-+. ++|+=|... .+...++|++++.+ ..+++|. +...+.. ...-...|...+
T Consensus 83 N~~l~~~~~~~p~rf~g~~a~vp~~~------~~~a~~el~r~~~~--~G~~Gv~-l~~~~~~-----~~l~d~~~~p~~ 148 (312)
T 3ij6_A 83 NEELSNLVDQHPGKFAGAVAILPMNN------IESACKVISSIKDD--ENLVGAQ-IFTRHLG-----KSIADKEFRPVL 148 (312)
T ss_dssp HHHHHHHHHHCTTTEEEEEEECCTTC------HHHHHHHHHHHHHC--TTEEEEE-EESEETT-----EETTSTTTHHHH
T ss_pred HHHHHHHHHhCCCceeeeEEecCccC------HHHHHHHHHHHHHh--CCCceEe-ccCCCCC-----CCCCCccHHHHH
Confidence 4456677888987554 566656431 23457788888765 4677774 2221110 011123578899
Q ss_pred HHhhhCCCCEEEEecC
Q psy4448 134 DLSVTHKLPLFLHCRN 149 (487)
Q Consensus 134 ~LA~el~lPViIH~r~ 149 (487)
+.|.++++||.||...
T Consensus 149 ~~~~e~g~pv~iH~g~ 164 (312)
T 3ij6_A 149 AQAAKLHVPLWMHPVF 164 (312)
T ss_dssp HHHHHTTCCEEEECCC
T ss_pred HHHHHcCCeEEEcCCC
Confidence 9999999999999954
No 36
>3ipw_A Hydrolase TATD family protein; niaid, ssgcid, seattle structural genomics center for infect disease, dysentery, liver abcess; 1.95A {Entamoeba histolytica hm-1}
Probab=99.28 E-value=8.2e-12 Score=126.75 Aligned_cols=119 Identities=29% Similarity=0.497 Sum_probs=91.4
Q ss_pred HHHHHHhhhCC---CCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceeecc
Q psy4448 130 RKQLDLSVTHK---LPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLET 206 (487)
Q Consensus 130 ~~qL~LA~el~---lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLlET 206 (487)
...+++.++++ ...|+||-....+.++-+-+. |.+=+|+|. . +...+.+++++.+|+||||+||
T Consensus 180 ~d~l~iL~~~~~~~~~gViH~FsGs~e~a~~~l~l-------G~yis~~G~--~----~k~~~~~~~v~~iPldrlLlET 246 (325)
T 3ipw_A 180 SDLCQLNKELGYNGCKGVVHCFDGTEEEMNQILNE-------GWDIGVTGN--S----LQSIELLNVMKQIPIERLHIET 246 (325)
T ss_dssp HHHHHHHHHTTCTTSCEEECSCCCCHHHHHHHHHT-------TCEEEECSG--G----GSSHHHHHHHTTSCGGGEEECC
T ss_pred HHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHhc-------CcEEeeCcc--c----cCcHHHHHHHHhCCcccEEEeC
Confidence 45566666654 247999988765555444333 234478874 1 1222345789999999999999
Q ss_pred CCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhh
Q psy4448 207 DCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSV 261 (487)
Q Consensus 207 D~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~ 261 (487)
|+||++|+|+|+++.|+.+|.|.|+|++|.+..++|.||+|..+...-..|.-.+
T Consensus 247 DaP~l~~~~~~~~~~~~~~p~p~r~~~k~~~~~~~g~rNeP~~v~~v~~~iA~l~ 301 (325)
T 3ipw_A 247 DCPYCGIKKTSAGFKYLKEKDFGVKVEKYQRNKYVQRRNEPSNIIDIAIIMSSIK 301 (325)
T ss_dssp CTTSCCCCTTSGGGGGCSSCCCCBCGGGCCTTSCBTTCCCGGGHHHHHHHHHHHH
T ss_pred CCccccccccccchhcccccCccccccccccccccCCcCcHHHHHHHHHHHHHhh
Confidence 9999999999999999999999998999999999999999999988877664443
No 37
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=99.26 E-value=3.5e-11 Score=125.92 Aligned_cols=124 Identities=10% Similarity=-0.013 Sum_probs=92.5
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEEC-------CCHHhHHHHHHHHhc--CCCeEEEee
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTG-------TNVEDSISSLKLAQS--DERLYSTVG 73 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~-------~~~~~~~~~~~la~~--~~~v~~avG 73 (487)
+||+|||+....+. ..+++....+.+...||+.++.++ .+.+.+....+.++. +.++....|
T Consensus 61 ~ID~H~H~~~~~~~---------~~~~~~~~~~~~~~~Gvtt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (448)
T 3hm7_A 61 MVDVHVHFNEPGRT---------EWEGFASGSKSLAAGGVTTYFDMPLNSNPPTITREELDKKRQLANEKSLVDYRFWGG 131 (448)
T ss_dssp EEEEEECCCTTTSG---------GGCCSHHHHHHHHTTTEEEEEECSSSSSSCSCSHHHHHHHHTHHHHHCSSEEEEEEE
T ss_pred EEEeeeccCCCCCC---------cHhHHHHHHHHHHhCCEEEEEeCCCCCCCCCChHHHHHHHHHHhccCCeeEEEEEEE
Confidence 89999999875431 135778888999999999998887 356677766666554 346788888
Q ss_pred cCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch
Q psy4448 74 CHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 74 iHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~ 151 (487)
++|... +.+++++.. .+++++ +|+||+. .......|.+.|++++++|+++++||++|+++..
T Consensus 132 ~~~~~~-----------~~l~~l~~~---g~~~~~-~~l~~~~-~~~~~~~~~~~l~~~l~~a~~~g~~v~vH~~~~~ 193 (448)
T 3hm7_A 132 LVPGNI-----------DHLQDLHDG---GVIGFK-AFMSECG-TDDFQFSHDETLLKGMKKIAALGSILAVHAESNE 193 (448)
T ss_dssp CCTTCG-----------GGHHHHHHT---TCSEEE-EESSSCS-SSSSCCCCHHHHHHHHHHHHHHTCCEEEECCCHH
T ss_pred ecccCH-----------HHHHHHHHc---CCCEEE-Eeecccc-CCccCcCCHHHHHHHHHHHHhcCCEEEEEeCCHH
Confidence 887532 234455543 688998 9999976 2222344899999999999999999999999743
No 38
>3e2v_A 3'-5'-exonuclease; structural genomics, hydrolase, PSI-2, protein initiative, NEW YORK SGX research center for structural GEN nysgxrc; 1.50A {Saccharomyces cerevisiae}
Probab=99.14 E-value=1.3e-11 Score=128.19 Aligned_cols=72 Identities=32% Similarity=0.556 Sum_probs=60.5
Q ss_pred ccCCccccCCC----ChhhhHHHHHHHHHHhhhC----CCCEEEEeccchHHHHHHHHHhCCC-----------------
Q psy4448 234 QWKPDKMVKSR----NEPANIVYFRKQLDLSVTH----KLPLFLHCRNAKSDFIEIMKEYAPK----------------- 288 (487)
Q Consensus 234 ~~~~~~~~~~~----n~P~Q~~~F~~ql~lA~~~----~lPl~iH~r~a~~~~l~il~~~~~~----------------- 288 (487)
.+||.++++.| +...|+++|++||+||+++ +|||+||||+|++++++||+++...
T Consensus 158 AIGEiGLDy~~~~~~~~e~Q~~~F~~QL~LA~e~~~~~~lPv~IH~R~A~~d~l~iL~~~~~~~~~~~~~~~~~~~~~~~ 237 (401)
T 3e2v_A 158 SIGEIGLDYDRFHYSSKEMQKVFFEEQLKISCLNDKLSSYPLFLHMRSACDDFVQILERFVVGFTDEKDTFQLQKLGASS 237 (401)
T ss_dssp EEEEEEEETTCTTTSCHHHHHHHHHHHHHHTTSSHHHHTSCEEEEEESCHHHHHHHHHHHHHCEECSSCTTCGGGC--CC
T ss_pred EEEEEeCCCCcCCCCCHHHHHHHHHHHHHHHHhhhccCCCeEEEEecchHHHHHHHHHHhhccccccccccccccccccc
Confidence 37888888866 3578999999999999999 9999999999999999999986421
Q ss_pred ------C--CCCcEEEEeeCCcccc
Q psy4448 289 ------L--PRKGVIHSFDGTPFQA 305 (487)
Q Consensus 289 ------~--~~~gv~hsfsG~~~~~ 305 (487)
+ ...||+|||||+.+++
T Consensus 238 ~~~~~~~~~~~~~V~H~FsGs~e~a 262 (401)
T 3e2v_A 238 SSGFYKFHPDRKLVVHSFTGSAIDL 262 (401)
T ss_dssp TTCEECCCTTCCEEECSCCCCHHHH
T ss_pred cccccccCCCCcEEEEcCCCCHHHH
Confidence 1 1469999999986554
No 39
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=99.07 E-value=1.3e-10 Score=120.02 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=70.0
Q ss_pred CHHH-HHHHHHhcCCCEEEEECC--------CH--------HhHHHHHHHHhcCCC-eEEEeecCCCCCCCcCCCchhhH
Q psy4448 29 DIDH-VLNRAWNAGLEKIIVTGT--------NV--------EDSISSLKLAQSDER-LYSTVGCHPTRCSEFENDPEGYL 90 (487)
Q Consensus 29 d~~~-vl~ra~~~GV~~ii~v~~--------~~--------~~~~~~~~la~~~~~-v~~avGiHP~~~~~~~~~~~~~l 90 (487)
|+++ .++.+.++||+..|+..+ ++ ...+.+.+.++++|. +.+...++|+.. +...
T Consensus 90 D~~~~rl~~MD~~GId~~Vl~~~~pg~~~~~d~~~a~~~~r~~Nd~l~~~~~~~P~Rf~g~a~v~~~~~-------~~a~ 162 (373)
T 4inf_A 90 DLGERRIADMDATGIDKAILALTSPGVQPLHDLDEARTLATRANDTLADACQKYPDRFIGMGTVAPQDP-------EWSA 162 (373)
T ss_dssp CCSHHHHHHHHHTTCCEEEEEECTTTTTTCSCHHHHHHHHHHHHHHHHHHHHHSTTTEEECBCCCTTSH-------HHHH
T ss_pred CchHHHHHHHHHCCCcEEEEccCCccccccCCHHHHHHHHHHHHHHHHHHHHhCCCEEEEEEecCCCCH-------HHHH
Confidence 4444 788999999998777522 21 134456777888884 677777888642 3446
Q ss_pred HHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 91 QSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 91 ~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
++|++++.+ ..+++|. +.-.+. . ...-...|...++.|.++++||.||....
T Consensus 163 ~EL~r~~~~--~G~~Gv~-l~~~~~--g---~~l~d~~~~pi~~~~~e~g~pV~iH~g~~ 214 (373)
T 4inf_A 163 REIHRGARE--LGFKGIQ-INSHTQ--G---RYLDEEFFDPIFRALVEVDQPLYIHPATS 214 (373)
T ss_dssp HHHHHHHHT--SCCCCEE-ECSCBT--T---BCTTSGGGHHHHHHHHHHTCCEEECCCCC
T ss_pred HHHHHHHhh--cCceEEE-ECCCCC--C---CCCCCcchHHHHHHHHHcCCeEEECCCCC
Confidence 788888875 3566664 222111 0 01122458889999999999999998753
No 40
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=99.05 E-value=1.8e-09 Score=111.27 Aligned_cols=120 Identities=17% Similarity=0.184 Sum_probs=83.0
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-C-----HHhHHHHHHHHhcC--CCeEEEeec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-N-----VEDSISSLKLAQSD--ERLYSTVGC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~-----~~~~~~~~~la~~~--~~v~~avGi 74 (487)
+||+|+|+....+. ..+++....+.+...||+.++.++. . ++.++...+.+++. .++++..++
T Consensus 51 ~iD~H~H~~~~~~~---------~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (426)
T 2z00_A 51 FLDLHAHLREPGEE---------VKEDLFSGLLAAVRGGYTDLVSMPNTKPPVDTPEAVRALKEKAKALGLARLHPAAAL 121 (426)
T ss_dssp EEEEEECCCTTTCT---------TTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHTSSEECCEECS
T ss_pred EEEeccccCCCCCC---------chHHHHHHHHHHHhCCccEEEecCCCCCCcChHHHHHHHHHHhcccCcccEEEEEEe
Confidence 89999999864220 1357888888999999999888764 2 35666666666654 467777788
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
||....+ .++.+++++.. .+++||+ ++.. ..+.+.|++++++|+++++||.+|+++.
T Consensus 122 ~~~~~~~-------~~~~~~~l~~~---g~~~i~~---~~~~------~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 178 (426)
T 2z00_A 122 TEKQEGK-------TLTPAGLLREA---GAVLLTD---DGRT------NEDAGVLAAGLLMAAPLGLPVAVHAEDA 178 (426)
T ss_dssp BGGGCSS-------SBCCHHHHHHH---TCCEEEC---TTSC------CCCHHHHHHHHHHHGGGTCCEEECCCCH
T ss_pred ecCCChh-------hHHHHHHHHHc---CCEEEEC---CCcC------CCCHHHHHHHHHHHHhhCCEEEEeCCCH
Confidence 8733211 12334555544 4678876 3222 2367789999999999999999999874
No 41
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=99.03 E-value=7.6e-11 Score=115.76 Aligned_cols=69 Identities=14% Similarity=0.209 Sum_probs=57.6
Q ss_pred ccCCccccCCCC----hhhhHHHHHHHHHHhhhCCCCEE-EEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCccc
Q psy4448 234 QWKPDKMVKSRN----EPANIVYFRKQLDLSVTHKLPLF-LHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ 304 (487)
Q Consensus 234 ~~~~~~~~~~~n----~P~Q~~~F~~ql~lA~~~~lPl~-iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~ 304 (487)
.+||.++++.++ ...|+++|++||+||+++++||+ ||||+|++++++||+++.. ...+|+|||+|+.++
T Consensus 83 aIGEiGLD~~~~~~~~~~~Q~~~F~~ql~lA~e~~lPviSiH~r~a~~~~~~il~~~~~--~~~~v~H~fsG~~e~ 156 (254)
T 3gg7_A 83 FVGEVGLDGSPSLRGTWTQQFAVFQHILRRCEDHGGRILSIHSRRAESEVLNCLEANPR--SGTPILHWYSGSVTE 156 (254)
T ss_dssp EEEEEECCCCGGGGGGHHHHHHHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHHHCGG--GEEEEEETCCSCHHH
T ss_pred EEEEEecCCCcccCCCHHHHHHHHHHHHHHHHHcCCCEEEEEcCCcHHHHHHHHHHcCC--CCcEEEEeCCCCHHH
Confidence 367888877654 46899999999999999999998 9999999999999999732 124599999997443
No 42
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=98.98 E-value=1.5e-10 Score=115.49 Aligned_cols=69 Identities=28% Similarity=0.425 Sum_probs=58.3
Q ss_pred cCCccccCCC---ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCccc
Q psy4448 235 WKPDKMVKSR---NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQ 304 (487)
Q Consensus 235 ~~~~~~~~~~---n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~ 304 (487)
+||.++++.+ +...|+++|++||++|+++++||+||+|+|.+++++||+++... ...||+|||+|+.++
T Consensus 95 IGEiGLD~~~~~~~~~~Q~~~F~~ql~lA~e~~lPv~iH~r~a~~~~l~il~~~~~~-~~~~V~H~fsG~~e~ 166 (287)
T 3rcm_A 95 VGECGLDFNRDFSPRPLQEKALEAQLTLAAQLRLPVFLHERDASERLLAILKDYRDH-LTGAVVHCFTGEREA 166 (287)
T ss_dssp EEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHTTGGG-CSCEEECSCCCCHHH
T ss_pred EEEeeeCCCcccCcHHHHHHHHHHHHHHHHHhCCCEEEEcCCcHHHHHHHHHHcCCC-CCeEEEEeCCCCHHH
Confidence 6777777765 34689999999999999999999999999999999999987543 236899999997543
No 43
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=98.94 E-value=1.1e-08 Score=106.24 Aligned_cols=142 Identities=13% Similarity=0.103 Sum_probs=84.1
Q ss_pred HHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcC-CCeEEEeecC--CCCCCCcCCCchhhHHHHHHHHHhcC-CCEEEEE
Q psy4448 33 VLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSD-ERLYSTVGCH--PTRCSEFENDPEGYLQSLDKIIKEGG-KKVVAFG 108 (487)
Q Consensus 33 vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~-~~v~~avGiH--P~~~~~~~~~~~~~l~~L~~ll~~~~-~~vvaIG 108 (487)
.+.++...||+.++.+...+....+ .+... ..++.+.+++ |.... ...++.++.+.+++.... ...+.++
T Consensus 115 ~~~~~l~~GvTtv~d~~~~~~~~~~---~~~~~g~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~i~~~ 188 (447)
T 4f0r_A 115 AMGEMIRGGTTTINDMYFYNAAVAR---AGLASGMRTFVGCSILEFPTNYA---SNADDYIAKGMAERSQFLGEDLLTFT 188 (447)
T ss_dssp HHHHHHHTTEEEEEECBSCHHHHHH---HHHHHTCEEEEEEEECSSCCSSC---SSHHHHHHHHHHHHHTTTTCTTEEEE
T ss_pred HHHHHHhCCcEEEEEcccCHHHHHH---HHHHcCCeEEEEchhcCCCcccc---cCHHHHHHHHHHHHHHhcCCCceEEE
Confidence 4555778999988877666554333 33332 3466677776 43321 123455666666665421 1122222
Q ss_pred eeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhC-----------CCCCCcEEEEecCCC
Q psy4448 109 EFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYA-----------PKLPRKGVIHSFDGT 177 (487)
Q Consensus 109 EIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~-----------~~~~~~~v~H~FsG~ 177 (487)
+.. ..+...+.+.|++++++|+++++||.+|+....+++..+++.++ ...+...+.||+..+
T Consensus 189 ---~~~----~~~~~~~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~ 261 (447)
T 4f0r_A 189 ---LAP----HAPYTVSDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLN 261 (447)
T ss_dssp ---EEE----CCGGGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCC
T ss_pred ---Eec----CCCCCCCHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCC
Confidence 110 11224467889999999999999999999998776665555443 211223466777777
Q ss_pred HHHHHHHHcC
Q psy4448 178 PFQAVDSLKT 187 (487)
Q Consensus 178 ~~~a~~~l~~ 187 (487)
.+.++.+.+.
T Consensus 262 ~~~~~~~~~~ 271 (447)
T 4f0r_A 262 DAEVELAARH 271 (447)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 7776666655
No 44
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=98.93 E-value=8e-09 Score=106.72 Aligned_cols=76 Identities=16% Similarity=0.124 Sum_probs=52.9
Q ss_pred cEEEEeeCCcccccccccc-----hhhHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCC
Q psy4448 293 GVIHSFDGTPFQAVDSLKT-----KENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKS 367 (487)
Q Consensus 293 gv~hsfsG~~~~~~~~~k~-----~~~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 367 (487)
++|++++| .++.+ ....++++.+|.||||++||+||..
T Consensus 281 nvy~d~s~------~~~~~~~~~~~~l~~l~~~~g~dRiLfGSD~P~~~------------------------------- 323 (376)
T 2qpx_A 281 NLYFDISL------LDNLGPSGASRVFNEAVELAPYTRILFASDASTYP------------------------------- 323 (376)
T ss_dssp TEEEECTT------HHHHSGGGHHHHHHHHTSSSCGGGEECCCCCCBSH-------------------------------
T ss_pred CEEEeccc------ccccChhhHHHHHHHHHHhcCCCCEEEECCCCccc-------------------------------
Confidence 57999988 22222 1223788999999999999999831
Q ss_pred CCccccH--HHHHHHHHHh---hCCCHHH-----HHHHHHHHHHHhcCCC
Q psy4448 368 RNEPANI--VQILEIVAAV---RGVEREK-----LGPIIHQNTLRLFFPH 407 (487)
Q Consensus 368 ~n~P~~l--~~v~~~iA~i---kg~~~~~-----va~~~~~N~~rlf~~~ 407 (487)
++.++ ....+.++++ ++++.++ +.++++.|+.|||++.
T Consensus 324 --e~~~~~~~~~~~~l~~l~~~~~ls~~~~~~~~~~~I~~~NA~rlf~l~ 371 (376)
T 2qpx_A 324 --EMYGLAARQFKQALVAHFNQLPFVDLAQKKAWINAICWQTSAKLYHQE 371 (376)
T ss_dssp --HHHHHHHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHTHHHHHHTTCG
T ss_pred --hhhcccHHHHHHHHHHHHcccCcchhhcCHHHHHHHHHHhHHHHhCCC
Confidence 00111 1234667777 4676666 9999999999999885
No 45
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=98.87 E-value=1.2e-07 Score=94.94 Aligned_cols=152 Identities=11% Similarity=0.050 Sum_probs=98.4
Q ss_pred cEEEecccCCCc--ccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCH--HhHHHHHHHHhcC-CCeEEEeecCC
Q psy4448 2 KYIDIGANLKDA--MYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNV--EDSISSLKLAQSD-ERLYSTVGCHP 76 (487)
Q Consensus 2 ~~iD~H~HL~~~--~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~--~~~~~~~~la~~~-~~v~~avGiHP 76 (487)
.+||+|+|+-+. .|--+.++.-....-.+++.++.+..+||++.|++..+. .+.+.+++..+++ +.+...+.+.|
T Consensus 26 ~~iDaH~H~~~~~~~~p~~~~~~~~~~~~~~e~l~~~m~~~GI~~~Vlvq~~~~~~dN~~ll~~l~~~~~r~~Gva~vdp 105 (303)
T 4d9a_A 26 GAIDAHCHVFGPMAQFPFSPKAKYLPRDAGPDMLFALRDHLGFARNVIVQASCHGTDNAATLDAIARAQGKARGIAVVDP 105 (303)
T ss_dssp TCEEEEECCBCCTTTSCCCTTCSCCBCCBCHHHHHHHHHHHTCSEEEEECCGGGTTCCHHHHHHHHHTTTSEEEEECCCT
T ss_pred CceEeeeEeecCcccCCCCCCCCCcCCCCCHHHHHHHHHHcCCCeEEEeccccccccHHHHHHHHHhCCCcEEEEEEeCC
Confidence 479999999863 221111111122356889999999999999999986543 3345566644445 46777778877
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc-hHHHH
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA-KSDFI 155 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a-~~d~l 155 (487)
... .++|+++... .++||.-.-. +.... ......|...++.+.+ |+||.+|+... ..++.
T Consensus 106 ~~~----------~~eL~~l~~~---G~rGvR~~~~-~~~~~----~~~~~~~~~~~~~l~~-gl~v~l~~~~~~l~~l~ 166 (303)
T 4d9a_A 106 AID----------EAELAALHEG---GMRGIRFNFL-KRLVD----DAPKDKFLEVAGRLPA-GWHVVIYFEADILEELR 166 (303)
T ss_dssp TCC----------HHHHHHHHHT---TEEEEEEECC-TTTCS----CCCHHHHHHHHTSCCT-TCEEEEECCGGGHHHHH
T ss_pred CCC----------HHHHHHHHHC---CCCEEEeecc-cCCcc----ccCHHHHHHHHHHHhc-CCEEEEecccccHHHHH
Confidence 431 2456665433 6888875432 11001 1234568999999999 99999999754 45788
Q ss_pred HHHHHhCCCCCCcEEEEecCC
Q psy4448 156 EIMKEYAPKLPRKGVIHSFDG 176 (487)
Q Consensus 156 ~iLk~~~~~~~~~~v~H~FsG 176 (487)
++++++ . .++|+-++.+
T Consensus 167 ~~~~~~-~---~~iVidH~G~ 183 (303)
T 4d9a_A 167 PFMDAI-P---VPIVIDHMGR 183 (303)
T ss_dssp HHHHHC-S---SCEEEGGGGC
T ss_pred HHHHHC-C---CcEEEeCCCC
Confidence 888888 3 3688855554
No 46
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=98.73 E-value=3.3e-09 Score=106.00 Aligned_cols=67 Identities=40% Similarity=0.701 Sum_probs=55.3
Q ss_pred cCCccccCCC----ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCc
Q psy4448 235 WKPDKMVKSR----NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP 302 (487)
Q Consensus 235 ~~~~~~~~~~----n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~ 302 (487)
+||.++++.+ ....|+++|++|+++|+++++||+||+|+|++++++||++.... ...+|.|||+|+.
T Consensus 107 IGEiGLd~~~~~~~~~~~Q~~~f~~ql~lA~~~~lPv~iH~r~a~~~~~~il~~~~~~-~~~~i~H~f~g~~ 177 (301)
T 2xio_A 107 IGECGLDFDRLQFCPKDTQLKYFEKQFELSEQTKLPMFLHCRNSHAEFLDITKRNRDR-CVGGVVHSFDGTK 177 (301)
T ss_dssp EEEEEEETTCTTTSCHHHHHHHHHHTHHHHHHHCCCEEEEEESCHHHHHHHHHHTGGG-SSCEEETTCCCCH
T ss_pred EEEeeCCCCcCCCCCHHHHHHHHHHHHHHHHHhCCcEEEEecCchHHHHHHHHhccCC-CCcEEEEccCCCH
Confidence 4566666543 34789999999999999999999999999999999999986432 2368999999963
No 47
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=98.61 E-value=3.5e-08 Score=101.40 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=82.1
Q ss_pred HHHHHHHhcCCCEEEEECCCH------------HhHHHHHHHH-hcCCCeEEEeecCCCCCC----CcCCCchhhHHHHH
Q psy4448 32 HVLNRAWNAGLEKIIVTGTNV------------EDSISSLKLA-QSDERLYSTVGCHPTRCS----EFENDPEGYLQSLD 94 (487)
Q Consensus 32 ~vl~ra~~~GV~~ii~v~~~~------------~~~~~~~~la-~~~~~v~~avGiHP~~~~----~~~~~~~~~l~~L~ 94 (487)
..+.++...||+.++....+- ..+ ...+.. .....++.++|.||.... ..........+.++
T Consensus 102 ~~~~~~~~~GvTtv~~~~gs~~~i~G~~~~~~~~~~-~~~~~~~~~~~~i~~~~g~~~~~~~~~~~~~p~~~~~~~~~l~ 180 (396)
T 3ooq_A 102 PAIERALAGGVTSVMIVPGSANPVGGQGSVIKFRSI-IVEECIVKDPAGLKMAFGENPKRVYGERKQTPSTRMGTAGVIR 180 (396)
T ss_dssp HHHHHHHTTTEEEEEECCCSSSSEEEEEEEEESCCS-SHHHHEEEEEEEEEEECSHHHHHHHHHTTCSCSSHHHHHHHHH
T ss_pred HHHHHHHhCCeEEEeccCCCCCcccCeeEEEeccCC-CHHHceecCCcEEEEEcCCCCcccccccCCCCccHHHHHHHHH
Confidence 457889999999887652100 011 111121 122357899999986531 00000111123333
Q ss_pred HHHHhc----CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch--HHHHHHHHHhCCCCCCc
Q psy4448 95 KIIKEG----GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK--SDFIEIMKEYAPKLPRK 168 (487)
Q Consensus 95 ~ll~~~----~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~--~d~l~iLk~~~~~~~~~ 168 (487)
+.+... .....++++.|+++.+ +.+.+.|++.+ +.++||.+|+..+. .+.++++++++.+ .
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~g~~~~~------~~~~e~l~~~~----~~~~~v~iHa~~~~~i~~~~~~~~~~g~~---~ 247 (396)
T 3ooq_A 181 DYFTKVKNYMKKKELAQKEGKEFTET------DLKMEVGEMVL----RKKIPARMHAHRADDILTAIRIAEEFGFN---L 247 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCCC------CHHHHHHHHHH----TTSSCEEEEECSHHHHHHHHHHHHHHTCC---E
T ss_pred HHHHHHHHHHHhhhhhhhccCCCCCc------ChhHHHHHHHH----cCCCcEEEEECchhHHHHHHHHHHHcCCC---E
Confidence 332210 0112345678988643 46777777664 78999999999876 6788888888652 3
Q ss_pred EEEEecCCCHHHHHHHHcC
Q psy4448 169 GVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 169 ~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.||+.++. .++.+.+.
T Consensus 248 ~i~H~~~~~~-~~~~l~~~ 265 (396)
T 3ooq_A 248 VIEHGTEAYK-ISKVLAEK 265 (396)
T ss_dssp EEEECTTGGG-GHHHHHHH
T ss_pred EEecCchHHH-HHHHHHHC
Confidence 7889998764 45655555
No 48
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=98.58 E-value=2.7e-08 Score=97.18 Aligned_cols=53 Identities=26% Similarity=0.466 Sum_probs=48.3
Q ss_pred hhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
...|.++|++|+++|+++++||+||+|+|+++++++|+++. ...+|+|+|+|+
T Consensus 121 ~~~q~~~f~~~~~la~~~~lPv~iH~~~a~~~~~~il~~~~---~~~~v~H~~~g~ 173 (272)
T 2y1h_A 121 KEEQRQVLIRQIQLAKRLNLPVNVHSRSAGRPTINLLQEQG---AEKVLLHAFDGR 173 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHHHHHHHTT---CCSEEEETCCSC
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEeCCcHHHHHHHHHhCC---CCCEEEEccCCC
Confidence 46799999999999999999999999999999999999874 246899999995
No 49
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=98.48 E-value=7.5e-08 Score=93.23 Aligned_cols=54 Identities=28% Similarity=0.448 Sum_probs=49.0
Q ss_pred hhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
...|.++|+.|+++|+++++||+||+|++.++++++|+++... ..+++|||+|+
T Consensus 109 ~~~q~~~f~~~~~~a~~~~~Pv~iH~~~a~~~~~~il~~~~~~--~~~i~H~~~g~ 162 (259)
T 1zzm_A 109 FERQQWLLDEQLKLAKRYDLPVILHSRRTHDKLAMHLKRHDLP--RTGVVHGFSGS 162 (259)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHHHCCT--TCEEETTCCSC
T ss_pred HHHHHHHHHHHHHHHHHhCCcEEEEecccHHHHHHHHHhcCCC--CCEEEEcCCCC
Confidence 5789999999999999999999999999999999999998532 36899999995
No 50
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=98.46 E-value=9.9e-08 Score=93.86 Aligned_cols=61 Identities=16% Similarity=0.200 Sum_probs=50.4
Q ss_pred cCCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEecc-----chHHHHHHHHHhCCCCCCCcEEEE
Q psy4448 235 WKPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRN-----AKSDFIEIMKEYAPKLPRKGVIHS 297 (487)
Q Consensus 235 ~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~-----a~~~~l~il~~~~~~~~~~gv~hs 297 (487)
+||.++++. ...|+++|++||+||+++++||+||+|+ |.+++++||+++.......++.||
T Consensus 96 IGEiGLD~~--~~~Q~~~f~~ql~lA~e~~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~ 161 (261)
T 3guw_A 96 FGEIGLELV--TDEEIEVLKSQLELAKRMDVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV 161 (261)
T ss_dssp EEEEECSSC--CHHHHHHHHHHHHHHHHHTCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC
T ss_pred EEEecCCCC--hHHHHHHHHHHHHHHHHhCCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC
Confidence 678888875 4789999999999999999999999996 489999999997543222356788
No 51
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=98.43 E-value=8.9e-08 Score=92.98 Aligned_cols=65 Identities=26% Similarity=0.506 Sum_probs=52.7
Q ss_pred CCccccCCC---ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 236 KPDKMVKSR---NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 236 ~~~~~~~~~---n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
+|.+++..+ +...|.++|++|+++|+++++||+||+|++.++++++|+++... ...+++|||+|+
T Consensus 94 GE~Gld~~~~~~~~~~q~~~f~~~l~~a~~~~lpv~iH~~~a~~~~~~il~~~~~~-~~~~v~H~~~g~ 161 (264)
T 1xwy_A 94 GECGLDFNRNFSTPEEQERAFVAQLRIAADLNMPVFMHCRDAHERFMTLLEPWLDK-LPGAVLHCFTGT 161 (264)
T ss_dssp EEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHGGGGGG-SSCEEECSCCCC
T ss_pred EEeccCCCCCCCcHHHHHHHHHHHHHHHHHhCCcEEEEcCCchHHHHHHHHhcCCC-CCcEEEEccCCC
Confidence 444444432 35789999999999999999999999999999999999987421 246799999995
No 52
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=98.35 E-value=1.3e-06 Score=88.62 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=38.3
Q ss_pred HHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEecC----CCHHHHHHHHcC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHSFD----GTPFQAVDSLKT 187 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~Fs----G~~~~a~~~l~~ 187 (487)
+.|++++++|+++++||.+|+.+ ..+++...+ +.+. +.+.||+. .+.+.++.+.+.
T Consensus 174 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~-~~G~----~~i~H~~~~~~~~~~~~~~~~~~~ 239 (386)
T 2vun_A 174 EDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVI-KTKP----DVVSHINGGPTAISVQEVDRIMDE 239 (386)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHH-HHCC----SEEETTTCSSSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHH-HcCC----CEEEEccCCCCCCCHHHHHHHHHc
Confidence 47889999999999999999973 333443333 4433 46888877 566655555443
No 53
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=98.33 E-value=7e-06 Score=86.02 Aligned_cols=113 Identities=8% Similarity=-0.057 Sum_probs=69.4
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC-----------CHH--------hHHHHHHHHh-cCC--CeEEEeecCCCCCCCcCCC
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT-----------NVE--------DSISSLKLAQ-SDE--RLYSTVGCHPTRCSEFEND 85 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~-----------~~~--------~~~~~~~la~-~~~--~v~~avGiHP~~~~~~~~~ 85 (487)
-++++.++.+.+.||+..|+..+ +++ ..+.+.+..+ ++| ++.+...++|+..
T Consensus 101 ~d~e~rl~~MD~~GId~~Vl~p~~~~~~~~~~~~d~e~a~~~~r~~Nd~lae~~~~~~P~~Rf~g~a~v~~~d~------ 174 (423)
T 4dzi_A 101 QNRDARIAVMDEQDIETAFMLPTFGCGVEEALKHDIEATMASVHAFNLWLDEDWGFDRPDHRIIAAPIVSLADP------ 174 (423)
T ss_dssp TCHHHHHHHHHHHTEEEEEEECSGGGGHHHHTTTCHHHHHHHHHHHHHHHHHHTCSSCTTCCEEECCBCCCSSH------
T ss_pred CCHHHHHHHHHHcCCcEEEECCCchhhccccccCCHHHHHHHHHHHHHHHHHHHHhhCCCCcEEEEEeCCccCH------
Confidence 47889999999999998777643 221 1334556666 787 4776667776542
Q ss_pred chhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch
Q psy4448 86 PEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 86 ~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~ 151 (487)
+..+++|++++.. .+.+|. +.-.+..........-...|....+.|.++++||.||.-...
T Consensus 175 -~~a~~EL~r~~~~---G~~Gv~-l~p~~~~~~~g~~~l~d~~~~pl~~~~~elg~pV~iH~g~~~ 235 (423)
T 4dzi_A 175 -TRAVEEVDFVLAR---GAKLVL-VRPAPVPGLVKPRSLGDRSHDPVWARLAEAGVPVGFHLSDSG 235 (423)
T ss_dssp -HHHHHHHHHHHHT---TCSCEE-CCSSCBCCSSSCBCTTCGGGHHHHHHHHHHTCCEEEECCCCS
T ss_pred -HHHHHHHHHHHHc---CCeEEE-EecCCCCCCCCCCCCCCccHHHHHHHHHhcCCeEEEeCCCCC
Confidence 3457788888753 355553 211100000000001113578889999999999999997653
No 54
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=98.25 E-value=6.2e-05 Score=78.43 Aligned_cols=141 Identities=14% Similarity=0.118 Sum_probs=78.1
Q ss_pred HHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCC-CeEEEeecC--CCCCCCcCCCchhhHHHHHHHHHhcC-CC-----E
Q psy4448 34 LNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDE-RLYSTVGCH--PTRCSEFENDPEGYLQSLDKIIKEGG-KK-----V 104 (487)
Q Consensus 34 l~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~-~v~~avGiH--P~~~~~~~~~~~~~l~~L~~ll~~~~-~~-----v 104 (487)
+.++...|++.++.+...++. +.+.+++.+ ..+.+.+++ |.... ...++.++...+++.... .. .
T Consensus 138 ~~~~l~~GvTtv~d~~~~~~~---~~~~~~~~g~r~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~ 211 (468)
T 3lnp_A 138 IAEMIQSGTTTFADMYFYPQQ---SGEAALAAGIRAVCFAPVLDFPTNYA---QNADEYIRKAIECNDRFNNHPMNEQGL 211 (468)
T ss_dssp HHHHHHTTEEEEEECCSCHHH---HHHHHHHHTCEEEEEEEECSSCCSSC---SSHHHHHHHHHHHHHHHHSCGGGTTCC
T ss_pred HHHHHhCCcEEEEEcccCHHH---HHHHHHHcCCeEEEeccccCCCcccc---cCHHHHHHHHHHHHHHhhcCCcccCce
Confidence 455678899988776555543 333333333 456677776 43221 112344555555544310 11 3
Q ss_pred EEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCC-----------CCCcEEEEe
Q psy4448 105 VAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPK-----------LPRKGVIHS 173 (487)
Q Consensus 105 vaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~-----------~~~~~v~H~ 173 (487)
+.+| ++....+ . ...+.|++.+++|+++++||.+|+....+++...++.++.. .+...+.||
T Consensus 212 i~~~-~~~~~~~-~-----~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~l~~~~~~~H~ 284 (468)
T 3lnp_A 212 VQIG-FGPHAPY-T-----VSDEPLKEITMLSDQLDMPVQIHLHETDFEVSESLETFNKRPTQRLADIGFLNERVSCVHM 284 (468)
T ss_dssp EEEE-EEECCTT-T-----SCHHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEEC
T ss_pred EEEE-EEcCCCC-C-----CCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEec
Confidence 3333 3332211 1 12367899999999999999999998877666666554321 111234466
Q ss_pred cCCCHHHHHHHHcC
Q psy4448 174 FDGTPFQAVDSLKT 187 (487)
Q Consensus 174 FsG~~~~a~~~l~~ 187 (487)
+..+.+.++.+.+.
T Consensus 285 ~~~~~~~~~~l~~~ 298 (468)
T 3lnp_A 285 TQVDDGDIKILQKT 298 (468)
T ss_dssp CSCCHHHHHHHHHH
T ss_pred cCCCHHHHHHHHhc
Confidence 66665555555444
No 55
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=98.23 E-value=4.2e-05 Score=77.67 Aligned_cols=173 Identities=14% Similarity=0.111 Sum_probs=98.7
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHH-------HHHHHHhcCCCEEEEECCCHHh---HHHHHHHHh-cCCCeEEE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDH-------VLNRAWNAGLEKIIVTGTNVED---SISSLKLAQ-SDERLYST 71 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~-------vl~ra~~~GV~~ii~v~~~~~~---~~~~~~la~-~~~~v~~a 71 (487)
+||+|+|+........+. ....+.+. .+.++...|++.+..++..... ++..++... ..|.++.+
T Consensus 60 lID~H~H~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~g~~~gpr~~~~ 135 (403)
T 3gnh_A 60 LIDMHVHLDSLAEVGGYN----SLEYSDRFWSVVQTANAKKTLEAGFTTVRNVGAADYDDVGLREAIDAGYVPGPRIVTA 135 (403)
T ss_dssp EEEEEECTTCCTTCCSGG----GGGSCHHHHHHHHHHHHHHHHHTTEEEEEECCCSTTHHHHHHHHHHTTSSCCCEEEEC
T ss_pred eEeeeEccccCcccchhh----hhcCCHHHHHHHHHHHHHHHHhCCeeEEEeCCCCccccHHHHHHHHCCCCCCCeEEec
Confidence 899999998643210000 00112222 2356778999988887763222 222222211 12445444
Q ss_pred e------ecCCCCCC----------CcCCCchhhHHHHHHHHHhcCC--CEEEEEeeCCCCCCCCCCChHHHHHHHHHHH
Q psy4448 72 V------GCHPTRCS----------EFENDPEGYLQSLDKIIKEGGK--KVVAFGEFGLDYDRVQYCPVETQLKYFRKQL 133 (487)
Q Consensus 72 v------GiHP~~~~----------~~~~~~~~~l~~L~~ll~~~~~--~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL 133 (487)
. |-|+.... ...+..++..+.+++++....+ ++.+-|.++.++.+.. ......+.|++.+
T Consensus 136 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~--~~~~~~e~l~~~~ 213 (403)
T 3gnh_A 136 AISFGATGGHCDSTFFPPSMDQKNPFNSDSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPG--QQQLTYEEMKAVV 213 (403)
T ss_dssp CSCEESTTSTTSCCSSCGGGCCCCTTCCCSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTT--CBCSCHHHHHHHH
T ss_pred CcccccCCCCcccccCchhhcccCCcccCCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCc--cccCCHHHHHHHH
Confidence 3 34654210 0111234445666666654212 3455577776654421 2234567799999
Q ss_pred HHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 134 DLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 134 ~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
+.|.++++||.+|+-... .+...+ +.+ ...+.||+..+.+.++.+.+.
T Consensus 214 ~~A~~~g~~v~~H~~~~~-~i~~~~-~~g----~~~i~H~~~~~~~~~~~~~~~ 261 (403)
T 3gnh_A 214 DEAHMAGIKVAAHAHGAS-GIREAV-RAG----VDTIEHASLVDDEGIKLAVQK 261 (403)
T ss_dssp HHHHHTTCEEEEEECSHH-HHHHHH-HTT----CSEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHCCCEEEEEeCCHH-HHHHHH-HhC----CCEEecCCcCCHHHHHHHHHC
Confidence 999999999999996543 233333 343 268999999999999888877
No 56
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=98.23 E-value=5.7e-07 Score=87.96 Aligned_cols=84 Identities=24% Similarity=0.277 Sum_probs=62.2
Q ss_pred cCCccccCCC---ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccc
Q psy4448 235 WKPDKMVKSR---NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 311 (487)
Q Consensus 235 ~~~~~~~~~~---n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~ 311 (487)
+|+.+++..+ ....|.++|+.|+++|+++++||+||++++..+++++|+++... ..++|+|||+|+.+.
T Consensus 101 iGe~Gld~~~~~~~~~~q~~~f~~~~~~a~~~~lPv~iH~~~~~~~~~~il~~~p~~-~~~~I~H~~~g~~~~------- 172 (268)
T 1j6o_A 101 IGETGLDFFRNISPAEVQKRVFVEQIELAGKLNLPLVVHIRDAYSEAYEILRTESLP-EKRGVIHAFSSDYEW------- 172 (268)
T ss_dssp EEEEEEETTTCSSCHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHSCCC-SSCEEETTCCSCHHH-------
T ss_pred EEccccCCcccCCChHHHHHHHHHHHHHHHHhCCCEEEEeCchHHHHHHHHHhcCCC-CCCEEEEcCCCCHHH-------
Confidence 3444554433 35789999999999999999999999999999999999987421 246788999995221
Q ss_pred hhhHHHhhhCCCCceEeccCC
Q psy4448 312 KENLETVKSIPEDRLLLETDC 332 (487)
Q Consensus 312 ~~~~e~v~~iPldrlLlETD~ 332 (487)
..++++ ..+.+.+++
T Consensus 173 --~~~~~~----~g~y~~~sg 187 (268)
T 1j6o_A 173 --AKKFID----LGFLLGIGG 187 (268)
T ss_dssp --HHHHHH----HTEEEEECG
T ss_pred --HHHHHH----CCCeEEecc
Confidence 123443 167777775
No 57
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=98.09 E-value=0.00037 Score=73.03 Aligned_cols=141 Identities=9% Similarity=0.077 Sum_probs=78.7
Q ss_pred HHHhcCCCEEEEECCCHHhHHHHHHHHhcCC-CeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC-CCEEEEEeeCCC
Q psy4448 36 RAWNAGLEKIIVTGTNVEDSISSLKLAQSDE-RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG-KKVVAFGEFGLD 113 (487)
Q Consensus 36 ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~-~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~-~~vvaIGEIGLD 113 (487)
++...|++.+...+..++. +.+.+.+.+ ..+.+.|++..... .....++.++.+.+++.... ...+.+| ++..
T Consensus 127 ~~l~~GvTtv~d~~~~~~~---~~~a~~~~g~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~~ 201 (472)
T 4dzh_A 127 EMLRGGTTCVNENYFFADV---QAAVYKQHGFRALVGAVIIDFPTA-WASSDDEYFARAGELHDQWRDDPLISTA-FAPH 201 (472)
T ss_dssp HHHHTTEEEEEEECSCHHH---HHHHHHHTTCEEEEEEEECSSCCS-SCSSHHHHHHHHHHHHHHHTTCSSEEEE-EEEC
T ss_pred HHHhCCcEEEEEcccCHHH---HHHHHHHhCCeEEEEecccCCCcc-cccCHHHHHHHHHHHHHHhCCCCceEEE-EecC
Confidence 3778999988877765544 334444443 45566676632111 11122344555555554311 2233343 3333
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCC-----------CCCcEEEEecCCCHHHHH
Q psy4448 114 YDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPK-----------LPRKGVIHSFDGTPFQAV 182 (487)
Q Consensus 114 ~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~-----------~~~~~v~H~FsG~~~~a~ 182 (487)
..+ . .-.+.+++.+++|+++++||.+|+....+++...++.++.. .+...+.||+.-+.+.++
T Consensus 202 ~~~-~-----~~~~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~l~~~~i~ 275 (472)
T 4dzh_A 202 APY-T-----VNDANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYGQRPLARLDRLGLVNDRLIAVHMTQLTEAEIH 275 (472)
T ss_dssp CTT-T-----SCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHH
T ss_pred CCC-C-----CCHHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEeccCCCHHHHH
Confidence 221 1 11367999999999999999999998877777666655321 111134565555555555
Q ss_pred HHHcC
Q psy4448 183 DSLKT 187 (487)
Q Consensus 183 ~~l~~ 187 (487)
.+.+.
T Consensus 276 ~l~~~ 280 (472)
T 4dzh_A 276 LCAER 280 (472)
T ss_dssp HHHHH
T ss_pred HHHHc
Confidence 44443
No 58
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=98.02 E-value=1.4e-06 Score=88.22 Aligned_cols=55 Identities=16% Similarity=0.236 Sum_probs=46.3
Q ss_pred hhhhHHHHHHHHHHhhhCCCCEEEEe----ccchHHHHHHHHHhCCCCCCC-cEEEEe-eCCc
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPLFLHC----RNAKSDFIEIMKEYAPKLPRK-GVIHSF-DGTP 302 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl~iH~----r~a~~~~l~il~~~~~~~~~~-gv~hsf-sG~~ 302 (487)
.+.|+++|++|+++|+++++||+||+ |+|. |+++||++.... +.. ++.|+| +|+.
T Consensus 143 ~~~q~~~f~~q~~lA~~~glPv~iH~~~~~r~a~-e~l~iL~~~g~~-~~~~~i~H~f~~~~~ 203 (330)
T 2ob3_A 143 TPFQELVLKAAARASLATGVPVTTHTAASQRDGE-QQAAIFESEGLS-PSRVCIGHSDDTDDL 203 (330)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCEEEECCGGGTHHH-HHHHHHHHTTCC-GGGEEECSGGGCCCH
T ss_pred CHHHHHHHHHHHHHHHHhCCeEEEECCCCCCCHH-HHHHHHHHcCcC-cccEEEeCCCCCCCH
Confidence 47899999999999999999999999 8888 999999986322 123 688999 7853
No 59
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=98.00 E-value=1.4e-06 Score=88.46 Aligned_cols=64 Identities=19% Similarity=0.045 Sum_probs=48.7
Q ss_pred CccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEecc--chHHHHHHHHHhCCCCCCCcEE-EEe-eCC
Q psy4448 237 PDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHCRN--AKSDFIEIMKEYAPKLPRKGVI-HSF-DGT 301 (487)
Q Consensus 237 ~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~--a~~~~l~il~~~~~~~~~~gv~-hsf-sG~ 301 (487)
+.+++...+.+.|+++|++|+++|+++++||+||+|+ +..+.++||++..... ..++. |+| ||+
T Consensus 154 EiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~~a~~~l~iL~e~~~~~-~~vvi~H~~~s~~ 221 (330)
T 3pnz_A 154 KFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPL-EYLSIGHMDRNLD 221 (330)
T ss_dssp EEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGCCHHHHHHHHHHTTCCG-GGEEETTGGGSCC
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcChHHHHHHHHHcCCCC-CeEEEecCCCCCC
Confidence 4455555678999999999999999999999999997 4455799999864432 23333 886 774
No 60
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=97.98 E-value=2.4e-06 Score=87.82 Aligned_cols=64 Identities=14% Similarity=0.136 Sum_probs=50.1
Q ss_pred CCccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEe--c-cchHHHHHHHHHhCCCCCCCcEEEEe-eC
Q psy4448 236 KPDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHC--R-NAKSDFIEIMKEYAPKLPRKGVIHSF-DG 300 (487)
Q Consensus 236 ~~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~--r-~a~~~~l~il~~~~~~~~~~gv~hsf-sG 300 (487)
|+.++++ ...+.|+++|++|+++|+++|+||+||+ | ++..++++||++........++.|+| +|
T Consensus 176 GEiGld~-~~t~~q~~~f~aq~~~A~~~glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~ 243 (364)
T 3k2g_A 176 GEIGVSS-DFTAEEEKSLRGAARAQVRTGLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSH 243 (364)
T ss_dssp EEEECCT-TCCHHHHHHHHHHHHHHHHHCCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGT
T ss_pred EEEEcCC-CCCHHHHHHHHHHHHHHHHHCCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCC
Confidence 4555554 3468999999999999999999999999 7 99999999999874332122334999 57
No 61
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=97.96 E-value=2.3e-06 Score=87.16 Aligned_cols=65 Identities=14% Similarity=0.227 Sum_probs=49.7
Q ss_pred CccccCCCChhhhHHHHHHHHHHhhhCCCCEEEEe---ccchHHHHHHHHHhCCCCCCCcEEEEe-eCCc
Q psy4448 237 PDKMVKSRNEPANIVYFRKQLDLSVTHKLPLFLHC---RNAKSDFIEIMKEYAPKLPRKGVIHSF-DGTP 302 (487)
Q Consensus 237 ~~~~~~~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~---r~a~~~~l~il~~~~~~~~~~gv~hsf-sG~~ 302 (487)
+.+++.....+.|+++|++|+++|+++++||+||+ |+|. ++++||++........++.|+| +|+.
T Consensus 159 Eigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~-~~~~iL~~~~~~~~~~vi~H~~~~~~~ 227 (339)
T 3gtx_A 159 KLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGP-QQAELLTSLGADPARIMIGHMDGNTDP 227 (339)
T ss_dssp EEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHH-HHHHHHHHTTCCGGGEEECCGGGCCCH
T ss_pred EEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHH-HHHHHHHHcCCCcccEEEEccCCCCCH
Confidence 34444445668999999999999999999999999 8888 4899999875432222356999 6753
No 62
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=97.93 E-value=0.00054 Score=69.70 Aligned_cols=55 Identities=11% Similarity=0.033 Sum_probs=42.8
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
+.|++.+++|+++++||.+|+.+.. .+..++ +.+. ..+.||+..+.+.++.+.+.
T Consensus 206 ~~l~~~~~~A~~~g~~v~~H~~~~~-~i~~~~-~~g~----~~i~H~~~~~~~~i~~~~~~ 260 (408)
T 3be7_A 206 EEMKAIVDEAHNHGMKVAAHAHGLI-GIKAAI-KAGV----DSVEHASFIDDETIDMAIKN 260 (408)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSHH-HHHHHH-HHTC----SEEEECTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHH-HcCC----CEEEECCCCCHHHHHHHHHC
Confidence 4588899999999999999998753 233333 3432 57999999999999888776
No 63
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=97.83 E-value=7.5e-06 Score=79.00 Aligned_cols=56 Identities=21% Similarity=0.405 Sum_probs=48.2
Q ss_pred ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 245 NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 245 n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
+...|.++|+.|+++|+++++||+||++++..+++++++++... ...+|+|+|+|+
T Consensus 105 ~~~~q~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~l~~~~~p-~~~~v~H~~~~~ 160 (265)
T 1yix_A 105 TKVRQQESFIHHIQIGRELNKPVIVHTRDARADTLAILREEKVT-DCGGVLHCFTED 160 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTGG-GTCEEETTCCSC
T ss_pred ChHHHHHHHHHHHHHHHHhCCCEEEEecCchHHHHHHHHhcCCC-CCCEEEEcCCCC
Confidence 35789999999999999999999999999999999999996311 135788999985
No 64
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=97.81 E-value=4.2e-05 Score=79.11 Aligned_cols=120 Identities=11% Similarity=0.153 Sum_probs=76.2
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC------CHHhHHHHHHHHhcCC--CeEEEeec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT------NVEDSISSLKLAQSDE--RLYSTVGC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~------~~~~~~~~~~la~~~~--~v~~avGi 74 (487)
+||+|+|+....+ ...+++....+.+...||+.++.... ..+.++...+.+++.+ .+++..++
T Consensus 55 ~iD~H~H~~~~~~---------~~~~~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (428)
T 3mpg_A 55 LVDVHVHLREPGG---------EHKETIETGTLAAAKGGFTTICAMPNTRPVPDCREHMEDLQNRIKEKAHVNVLPYGAI 125 (428)
T ss_dssp EEEEEECCCTTTC---------TTTCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECEES
T ss_pred EEEEeeccCCCCC---------CchhHHHHHHHHHHhCCeEEEEeCCCCCCCCCcHHHHHHHHHHhcccCCcEEEEEeeE
Confidence 8999999976422 12467888888999999998887532 4556666666665544 33333344
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
.+.... +.++.+.+++.. .+.+++.-|. ...+.+.++++++.|+++++||++|+++.
T Consensus 126 ~~~~~~-------~~l~~~~~l~~~---G~~~~~~~~~---------~~~~~~~l~~~~~~a~~~g~~v~vH~~~~ 182 (428)
T 3mpg_A 126 TVRQAG-------SEMTDFETLKEL---GAFAFTDDGV---------GVQDASMMLAAMKRAAKLNMAVVAHCEEN 182 (428)
T ss_dssp BGGGCS-------SSBCCHHHHHHT---TCCCEECTTS---------CCCCHHHHHHHHHHHHHTTCCEEECCCCG
T ss_pred ecCCCc-------chHHHHHHHHHh---CCEEEECCCc---------CCCCHHHHHHHHHHHHhcCCeEEEECCCh
Confidence 432211 112345555543 2344432221 12367889999999999999999999863
No 65
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=97.76 E-value=0.00033 Score=72.38 Aligned_cols=140 Identities=10% Similarity=0.074 Sum_probs=75.1
Q ss_pred HHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCC-CeEEEeecC--C-CCCCCcCCCchhhHHHHHHHHHhcC-CCEEEEE
Q psy4448 34 LNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDE-RLYSTVGCH--P-TRCSEFENDPEGYLQSLDKIIKEGG-KKVVAFG 108 (487)
Q Consensus 34 l~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~-~v~~avGiH--P-~~~~~~~~~~~~~l~~L~~ll~~~~-~~vvaIG 108 (487)
+.++...|++.++.+...++...+.. ++.+ ..+.+.++. | .... ..++.++...+++.... ...+.+|
T Consensus 118 ~~~~l~~GvTtv~d~~~~~~~~~~a~---~~~g~r~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~v~~~ 190 (451)
T 4dyk_A 118 IAEQVKGGITCFSDMYFYPQAICGVV---HDSGVRAQVAIPVLDFPIPGAR----DSAEAIRQGMALFDDLKHHPRIRIA 190 (451)
T ss_dssp HHHHHHTTEEEEEEECSCHHHHHHHH---HHHTCEEEEEEEECSSCBTTBS----SHHHHHHHHHHHHHHTTTCSSEEEE
T ss_pred HHHHHhCCcEEEEEcccCHHHHHHHH---HHcCCeEEEEchhhCCCCcccc----CHHHHHHHHHHHHHHhcCCCceEEE
Confidence 34556899998888777665543333 2222 223333332 2 2211 12344555566655421 1222222
Q ss_pred eeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCC-----------CCCcEEEEecCCC
Q psy4448 109 EFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPK-----------LPRKGVIHSFDGT 177 (487)
Q Consensus 109 EIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~-----------~~~~~v~H~FsG~ 177 (487)
++.... .....+.|++.+++|+++++||.+|+....+++...++.++.. .+...+.||..-+
T Consensus 191 -~~~~~~------~~~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~ 263 (451)
T 4dyk_A 191 -FGPHAP------YTVSDDKLEQILVLTEELDASIQMHVHETAFEVEQAMERNGERPLARLHRLGLLGPRFQAVHMTQVD 263 (451)
T ss_dssp -EEECCG------GGSCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHTTCCSTTEEEEECCCCC
T ss_pred -EecCCC------CccCHHHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHhCCCHHHHHHHCCCCCCCeEEEECCCCC
Confidence 222211 1223467999999999999999999988776666666544321 1112355666666
Q ss_pred HHHHHHHHcC
Q psy4448 178 PFQAVDSLKT 187 (487)
Q Consensus 178 ~~~a~~~l~~ 187 (487)
.+.++.+.+.
T Consensus 264 ~~~~~~l~~~ 273 (451)
T 4dyk_A 264 NDDLAMLVET 273 (451)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 5555554443
No 66
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=97.75 E-value=6.3e-06 Score=84.77 Aligned_cols=65 Identities=8% Similarity=-0.031 Sum_probs=50.1
Q ss_pred CccccCCCChhhhHHHHHHHHHHhhhC-CCCEEEEe-c--cchHHHHHHHHHh-CCCCCCCcEEEEe-e-CCc
Q psy4448 237 PDKMVKSRNEPANIVYFRKQLDLSVTH-KLPLFLHC-R--NAKSDFIEIMKEY-APKLPRKGVIHSF-D-GTP 302 (487)
Q Consensus 237 ~~~~~~~~n~P~Q~~~F~~ql~lA~~~-~lPl~iH~-r--~a~~~~l~il~~~-~~~~~~~gv~hsf-s-G~~ 302 (487)
+.+++. ...+.|+++|++|+++|+++ |+||+||+ | ++..+++++|++. .......++.|+| | |+.
T Consensus 166 EiGld~-~~t~~q~~~f~aq~~~A~~~~glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~ 237 (365)
T 3rhg_A 166 EIGVSP-FFTDGEKNSLRAAALAQNNNPYASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDI 237 (365)
T ss_dssp EEECCT-TCCHHHHHHHHHHHHHHTTCTTCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCH
T ss_pred EEEcCC-CCCHHHHHHHHHHHHHHHHhcCCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCH
Confidence 444443 34589999999999999999 99999998 9 9999999999986 3322122346999 6 653
No 67
>2vm8_A Dihydropyrimidinase-related protein 2; neurogenesis, phosphoprotein, differentiation, CRMP, cytoplasm, TIM barrel, polymorphism, axonal pathfinding; 1.9A {Homo sapiens} PDB: 2gse_A 1kcx_A
Probab=97.72 E-value=7.9e-05 Score=78.69 Aligned_cols=127 Identities=13% Similarity=0.031 Sum_probs=76.2
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEEC-CCH-----HhHHHHHHHHhcCCCeEEEeecCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTG-TNV-----EDSISSLKLAQSDERLYSTVGCHP 76 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~-~~~-----~~~~~~~~la~~~~~v~~avGiHP 76 (487)
+||+|+|+....|. . ...+++....+++...||+.++.+. +.+ +.++...+.+.+. .+..+|+|+
T Consensus 80 lID~H~H~~~~~~~-~------~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~ 150 (501)
T 2vm8_A 80 GIDVHTRFQMPDQG-M------TSADDFFQGTKAALAGGTTMIIDHVVPEPGTSLLAAFDQWREWADSK--SCCDYSLHV 150 (501)
T ss_dssp EEEEEECTTCEETT-E------ECSSCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHHHH--CSSEEEEEE
T ss_pred EEEeeecccccccC-C------CcHHHHHHHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHHhcC--CeeEEEEEE
Confidence 89999999865331 0 1135777778888999999887653 322 2233333444332 234567776
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
... .+ .....+++++++.+ . |+.|++++.........+.+.|++++++|+++++||.+|++.
T Consensus 151 ~~~-~~---~~~~~~e~~~l~~~--~-----G~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g~~v~~H~e~ 212 (501)
T 2vm8_A 151 DIS-EW---HKGIQEEMEALVKD--H-----GVNSFLVYMAFKDRFQLTDCQIYEVLSVIRDIGAIAQVHAEN 212 (501)
T ss_dssp ECC-SC---SHHHHHHHHHHHHH--S-----CCCEEEEESSSTTTTBCCHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred Eec-CC---CcccHHHHHHHHHh--C-----CceEEEEeeccCCCCCCCHHHHHHHHHHHHHhCCEEEEEccC
Confidence 422 11 12335667777654 1 333333221000112346788999999999999999999986
No 68
>1gkr_A Hydantoinase, non-ATP dependent L-selective hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX; 2.60A {Arthrobacter aurescens} SCOP: b.92.1.3 c.1.9.6
Probab=97.64 E-value=0.00018 Score=74.40 Aligned_cols=124 Identities=11% Similarity=-0.014 Sum_probs=81.1
Q ss_pred EEEecccCCCcc-cccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC--C-----HHhHHHHHHHHhcCCCeEEEeec
Q psy4448 3 YIDIGANLKDAM-YEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT--N-----VEDSISSLKLAQSDERLYSTVGC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~-f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~--~-----~~~~~~~~~la~~~~~v~~avGi 74 (487)
+||+|+|+.... +. ..+++....+.+...||+.++.++. . .+.++..++.++... + .+|+
T Consensus 56 lID~H~H~~~~~~~~---------~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~ 123 (458)
T 1gkr_A 56 VVDEHVHIIDMDLKN---------RYGRFELDSESAAVGGITTIIEMPITFPPTTTLDAFLEKKKQAGQRLK-V--DFAL 123 (458)
T ss_dssp EEEEEEECCCGGGTT---------TSCCHHHHHHHHHHHTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCS-S--EEEE
T ss_pred EEEeeecccCCCCCC---------chhHHHHHHHHHHcCCEEEEEeCCCCCCCCCCcHHHHHHHHHHhhhCc-e--eEEE
Confidence 899999998643 20 1356777777888999999887762 2 344444555544443 2 3455
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
|+.... +.++.+++++.. .+.+|+ ++++++..+ .....+.+.|+++++.|+++++||.+|++..
T Consensus 124 ~~~~~~-------~~~~~~~~~~~~---g~~~i~-~~~~~~~~~-~~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~ 187 (458)
T 1gkr_A 124 YGGGVP-------GNLPEIRKMHDA---GAVGFK-SMMAASVPG-MFDAVSDGELFEIFQEIAACGSVIVVHAENE 187 (458)
T ss_dssp EEECCT-------TCHHHHHHHHHT---TCCEEE-EESSCSBTT-TBCBCCHHHHHHHHHHHHHHTCEEEEECCCH
T ss_pred EeccCC-------CCHHHHHHHHHc---CCcEEE-EeecccCCC-CcccCCHHHHHHHHHHHHHcCCEEEEECCCH
Confidence 542211 124566777754 467886 788875311 1123477889999999999999999999764
No 69
>3h4u_A Amidohydrolase; signature of Zn ligands, structural genomics, NYSGXRC, target 9236E, PSI-2, protein structure initiative; 2.20A {Unidentified} PDB: 3hpa_A
Probab=97.62 E-value=0.0012 Score=68.75 Aligned_cols=62 Identities=11% Similarity=-0.089 Sum_probs=37.9
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHH-----------HHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIM-----------KEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iL-----------k~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.|++.+++|+++++||.+|+.....++...+ .+.+...+...+.||..-+.+.++.+.+.
T Consensus 239 ~e~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~i~H~~~~~~~~~~~l~~~ 311 (479)
T 3h4u_A 239 RDLMRDAAVLAREYGVSLHTHLAENVNDIAYSREKFGMTPAEYAEDLGWVGHDVWHAHCVQLDDAGIGLFART 311 (479)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEESCSHHHHHC-------CHHHHHHHTTCCSTTEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCeEEEEecCCCHHHHHHHHHc
Confidence 367899999999999999999987765543333 33322111123556655555555544443
No 70
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=97.59 E-value=0.00091 Score=68.14 Aligned_cols=172 Identities=13% Similarity=0.104 Sum_probs=101.5
Q ss_pred EEEecccCCCcccccccccCCCCCCCC-------HHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcC-CCeE-----
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPD-------IDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSD-ERLY----- 69 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d-------~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~-~~v~----- 69 (487)
+||+|+|+....+..-... ..+ ....++++...||+.+..++.....+.+.++..... |.++
T Consensus 61 lID~H~H~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~l~~~~~~~~~~g~r~~~~g~~ 135 (423)
T 3feq_A 61 FIDCHVHVLASNANLGVNA-----TQPNILAAIRSLPILDAMLSRGFTSVRDAGGADWSLMQAVETGLVSGPRIFPSGKA 135 (423)
T ss_dssp EEEEEECTTCCSSCHHHHH-----HSCHHHHHHTHHHHHHHHHHTTEEEEEECSSCCHHHHHHHHTTSSCSCEEECCCSE
T ss_pred eeeeEeeecccCCChhhhh-----cCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchHHHHHHHHcCCCCCCeEEecCcc
Confidence 8999999986432000000 011 123456667899999988877666655555443221 3332
Q ss_pred -EEeecCCCCCCC------------------cCCCchhhHHHHHHHHHhcCC--CEEEEEeeCCCCCCCCCCChHHHHHH
Q psy4448 70 -STVGCHPTRCSE------------------FENDPEGYLQSLDKIIKEGGK--KVVAFGEFGLDYDRVQYCPVETQLKY 128 (487)
Q Consensus 70 -~avGiHP~~~~~------------------~~~~~~~~l~~L~~ll~~~~~--~vvaIGEIGLD~~~~~~~~~e~Q~~v 128 (487)
...|-|+..... ..+..++..+.+++++..... ++.+.|.+|.++.+ ........+.
T Consensus 136 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p--~~~~~~~~e~ 213 (423)
T 3feq_A 136 LSQTGGHGDFRPRGDLLEPCSCCFRTGAIARVVDGVEGVRLAVREEIQKGATQIKIMASGGVASPTDP--IANTQYSEDE 213 (423)
T ss_dssp EECTTSTTCCCCC---CCCCCSSCCTTCSEEECCSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCC--TTSBCSCHHH
T ss_pred cccCCCCccccccccccccccccccccccceecCCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCC--cccccCCHHH
Confidence 223444432110 001123334555656554212 34555777776532 1222345678
Q ss_pred HHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 129 FRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 129 F~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
|++.+++|.++++||.+|+.. .+.+...++ .+. ..+.||+..+.+.++.+.+.
T Consensus 214 l~~~~~~A~~~g~~v~~H~~~-~~~i~~~l~-~g~----~~i~H~~~~~~~~~~~l~~~ 266 (423)
T 3feq_A 214 IRAIVDEAEAANTYVMAHAYT-GRAIARAVR-CGV----RTIEHGNLVDEAAAKLMHEH 266 (423)
T ss_dssp HHHHHHHHHHTTCCEEEEEEE-HHHHHHHHH-HTC----CEEEEEEECCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCeEEEEeCC-hHHHHHHHH-cCC----CEEeccCcCCHHHHHHHHHC
Confidence 999999999999999999984 344555554 433 58999999999999888876
No 71
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=97.56 E-value=3.7e-05 Score=76.17 Aligned_cols=57 Identities=16% Similarity=0.042 Sum_probs=45.6
Q ss_pred CChhhhHHHHHHHHHHhhhCCCCEEEEec---cchHHHHHHHHHhCCCCCCCcEEEEeeC
Q psy4448 244 RNEPANIVYFRKQLDLSVTHKLPLFLHCR---NAKSDFIEIMKEYAPKLPRKGVIHSFDG 300 (487)
Q Consensus 244 ~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r---~a~~~~l~il~~~~~~~~~~gv~hsfsG 300 (487)
...+.|+++|++|+++|+++++||+||++ ++..+++++|++........++.|+|++
T Consensus 144 ~~~~~q~~~~~~~~~lA~~~~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~ 203 (314)
T 2vc7_A 144 GITKDVEKVIRAAAIANKETKVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDT 203 (314)
T ss_dssp CSCHHHHHHHHHHHHHHHHHCCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGC
T ss_pred CCCHHHHHHHHHHHHHHHHHCCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCC
Confidence 34688999999999999999999999995 7888999999985322112257799874
No 72
>2ogj_A Dihydroorotase; TIM barrel, binuclear zinc, imidazole complex, amido hydrola 9244B, structural genomics, PSI-2; HET: KCX; 2.62A {Agrobacterium tumefaciens}
Probab=97.55 E-value=0.00035 Score=71.70 Aligned_cols=152 Identities=13% Similarity=0.210 Sum_probs=77.0
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEEC-CCHHhHHHHHH-HHhcC-CCeEEEe-----ec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTG-TNVEDSISSLK-LAQSD-ERLYSTV-----GC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~-~~~~~~~~~~~-la~~~-~~v~~av-----Gi 74 (487)
+||+|+|+...... + ..+.+ ..+...||+.++.++ +.+.++....+ +.+.. +++...+ |+
T Consensus 73 lID~H~H~~~~~~~--~-------~~~~~---~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~G~ 140 (417)
T 2ogj_A 73 WVDLHVHIWHGGTD--I-------SIRPS---ECGAERGVTTLVDAGSAGEANFHGFREYIIEPSRERIKAFLNLGSIGL 140 (417)
T ss_dssp EEEEEECCCBTTBS--S-------CCCGG---GTSGGGTEEEEEEESSCCSTTHHHHHHHTTTTCSSEEEEEEESSTTTT
T ss_pred eeeccccccccccc--c-------CCCHH---HHHHhCCcCeEEeCCcCCCcCHHHHHHHHhhccccCeEEEeccccCcC
Confidence 89999999753220 0 11211 235678999888664 33444444433 23322 3333333 55
Q ss_pred CCCCC-CCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc---
Q psy4448 75 HPTRC-SEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA--- 150 (487)
Q Consensus 75 HP~~~-~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a--- 150 (487)
|+... .+...-.....+.+++++......+.+|. +.+........ -.+.++..+++|+++++||.+|+.+.
T Consensus 141 ~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~ik-~~~~~~~~~~~----~~~~l~~~~~~a~~~g~~v~~H~~~~~~~ 215 (417)
T 2ogj_A 141 VACNRVPELRDIKDIDLDRILECYAENSEHIVGLK-VRASHVITGSW----GVTPVKLGKKIAKILKVPMMVHVGEPPAL 215 (417)
T ss_dssp TTTTTSCSCSSGGGCCHHHHHHHHHTCTTTEEEEE-EEESHHHHTTC----TTHHHHHHHHHHHHHTCCEEEEECSSSSC
T ss_pred CCCCCcccccchhhcCHHHHHHHHHhCCCceEEEE-EEecCCccccc----cHHHHHHHHHHHHHcCCcEEEEcCCCccc
Confidence 54210 01100001123556667765333444432 11110000001 12456778899999999999999764
Q ss_pred hHHHHHHHHHhCCCCCCcEEEEecCCC
Q psy4448 151 KSDFIEIMKEYAPKLPRKGVIHSFDGT 177 (487)
Q Consensus 151 ~~d~l~iLk~~~~~~~~~~v~H~FsG~ 177 (487)
.++++.+++ . ...+.|||.+.
T Consensus 216 ~~~~~~~l~---~---g~~~~H~~~~~ 236 (417)
T 2ogj_A 216 YDEVLEILG---P---GDVVTHCFNGK 236 (417)
T ss_dssp HHHHHHHCC---T---TCEEETTTCCC
T ss_pred HHHHHHHhc---C---CCEEEeccCCC
Confidence 345544442 1 15788999864
No 73
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=97.52 E-value=0.0016 Score=66.91 Aligned_cols=172 Identities=10% Similarity=0.075 Sum_probs=100.0
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHH-------HHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcC-CCeEEE---
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDID-------HVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSD-ERLYST--- 71 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~-------~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~-~~v~~a--- 71 (487)
+||+|+|+....+. +.. . ...+.+ ..+.++...||+.+..++.....+.+.++..... |.++.+
T Consensus 61 liD~H~H~~~~~~~-~~~---~-~~~~~~~~~~~~~~~~~~~l~~GvTtv~d~~~~~~~l~~~i~~~~~~gpri~~~g~~ 135 (426)
T 2r8c_A 61 LIDLHVHVVAIEFN-LPR---V-ATLPNVLVTLRAVPIMRAMLRRGFTTVRDAGGAGYPFKQAVESGLVEGPRLFVSGRA 135 (426)
T ss_dssp EEEEEECTTCCSSC-HHH---H-HHSCHHHHHHHHHHHHHHHHHTTEEEEEECSSCCHHHHHHHHTTSSCCCEEEECCSE
T ss_pred eEeeeeccccccCC-chh---h-ccCCHHHHHHHHHHHHHHHHhCCeEEEEeCCCchHHHHHHHHcCCCCCCeEEecCCc
Confidence 89999999864320 000 0 001111 2345567899999998887665555555443221 344332
Q ss_pred ---eecCCCCCC---------------------CcCCCchhhHHHHHHHHHhcCC--CEEEEEeeCCCCCCCCCCChHHH
Q psy4448 72 ---VGCHPTRCS---------------------EFENDPEGYLQSLDKIIKEGGK--KVVAFGEFGLDYDRVQYCPVETQ 125 (487)
Q Consensus 72 ---vGiHP~~~~---------------------~~~~~~~~~l~~L~~ll~~~~~--~vvaIGEIGLD~~~~~~~~~e~Q 125 (487)
.|-|+.... ...+..++..+.+++++..... ++.+.|.+|-.+.+ .......
T Consensus 136 i~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p--~~~~~~~ 213 (426)
T 2r8c_A 136 LSQTGGHADPRARSDYMPPDSPCGCCVRVGALGRVADGVDEVRRAVREELQMGADQIKIMASGGVASPTDP--VGVFGYS 213 (426)
T ss_dssp EECTTSTTCCCCCSSBCCCSCSSSSBCCTTCCEEECCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCC--SSCBCSC
T ss_pred ccCCCCCcccccccccccccccccccccccccccccCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCC--cccccCC
Confidence 233432210 0011123344556666654222 34455666654422 1122345
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.+++.++.|.++++||.+|+... +.+...++ .+ ...+-|++..+.+.++.+.+.
T Consensus 214 ~e~l~~~~~~A~~~g~~v~~H~~~~-~~i~~al~-~G----~~~i~H~~~~~~~~~~~~~~~ 269 (426)
T 2r8c_A 214 EDEIRAIVAEAQGRGTYVLAHAYTP-AAIARAVR-CG----VRTIEHGNLIDDETARLVAEH 269 (426)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSH-HHHHHHHH-TT----CSEEEECTTCCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCEEEEEeCCh-HHHHHHHH-cC----CCEEecCCcCCHHHHHHHHHc
Confidence 5679999999999999999999843 44545554 33 267999999999999988887
No 74
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=97.50 E-value=4.4e-05 Score=78.38 Aligned_cols=55 Identities=9% Similarity=0.113 Sum_probs=42.8
Q ss_pred CCChhhhHHHHHHHHHHhhhCCCCEEEEecc---chHHHHHHHHHhCCCCCCCcEEEEeeC
Q psy4448 243 SRNEPANIVYFRKQLDLSVTHKLPLFLHCRN---AKSDFIEIMKEYAPKLPRKGVIHSFDG 300 (487)
Q Consensus 243 ~~n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~---a~~~~l~il~~~~~~~~~~gv~hsfsG 300 (487)
....+.|+++|++|+++|+++++||+||+|. |. |+++||++.... ..++++++.+
T Consensus 161 ~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e~g~~--~~~vvi~H~~ 218 (363)
T 3ovg_A 161 GAIDRLELKALEVAARTSILTGCPILVHTQLGTMAL-EVAKHLIGFGAN--PDKIQISHLN 218 (363)
T ss_dssp TBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHHHTCC--GGGEEEECGG
T ss_pred CCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHhcCCC--CCcEEEEcCC
Confidence 3567899999999999999999999999974 55 999999987543 2344444433
No 75
>2z26_A Dihydroorotase, dhoase; TIM barrel, hydrolase; HET: KCX DOR NCD; 1.29A {Escherichia coli} PDB: 2z24_A* 2z25_A* 2eg6_A* 1xge_A* 2eg7_A* 2eg8_A* 2z27_A* 2e25_A* 2z28_A* 2z29_A* 3mjm_A* 2z2a_A* 1j79_A* 2z2b_A* 3ihn_A* 3jze_A*
Probab=97.46 E-value=0.0038 Score=63.11 Aligned_cols=119 Identities=15% Similarity=0.072 Sum_probs=65.7
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC------CHHhHHHHHHHHhcC-C---CeEEEe
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT------NVEDSISSLKLAQSD-E---RLYSTV 72 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~------~~~~~~~~~~la~~~-~---~v~~av 72 (487)
+||.|+|+.. -+ . ..+. ..|...|++.++.+.. +++.+....+.+++. . ++++..
T Consensus 12 ~ID~HvH~~~-g~------------~-~~e~-~aa~~gGvTtvv~mpnt~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (347)
T 2z26_A 12 PDDWHLHLRD-GD------------M-LKTV-VPYTSEIYGRAIVMPNLAPPVTTVEAAVAYRQRILDAVPAGHDFTPLM 76 (347)
T ss_dssp CCEEEECCCS-HH------------H-HHHH-HHHHHTTCSEEEECCCCSSCCCSHHHHHHHHHHHHHTSCTTCCCEEEE
T ss_pred cceeeecCCC-CC------------c-hhhH-HHHHhCCCCEEEECCCCCCCCCCHHHHHHHHHHHhcccCCcccEEEEE
Confidence 7999999987 22 0 1122 5567789999887642 234455444444332 2 244333
Q ss_pred ec--CCCCCCCcCCCchhhHHHHHHHHHhcCCCE-EEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 73 GC--HPTRCSEFENDPEGYLQSLDKIIKEGGKKV-VAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 73 Gi--HP~~~~~~~~~~~~~l~~L~~ll~~~~~~v-vaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
|+ ++. ..+++|..+... .+ +++ .+=+.|...+....-.-...+.+.++.|+++++||++|+.+
T Consensus 77 ~~~~~~~----------~~~~ei~~l~~~---G~~~g~-K~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~vH~ed 142 (347)
T 2z26_A 77 TCYLTDS----------LDPNELERGFNE---GVFTAA-KLYPANATANSSHGVTSVDAIMPVLERMEKIGMPLLVHGEV 142 (347)
T ss_dssp EEECCTT----------CCHHHHHHHHHT---TSEEEE-EECCCCTTCCTTTCCSCGGGGHHHHHHHHHHTCCEEECCCC
T ss_pred EEEeCCC----------CCHHHHHHHHHC---CCeEEE-EEeecCCcCCCCCccCCHHHHHHHHHHHHHhCCEEEEEecC
Confidence 32 432 114566666543 44 566 55444321000000012345777788999999999999986
Q ss_pred c
Q psy4448 150 A 150 (487)
Q Consensus 150 a 150 (487)
.
T Consensus 143 ~ 143 (347)
T 2z26_A 143 T 143 (347)
T ss_dssp C
T ss_pred C
Confidence 4
No 76
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=97.46 E-value=0.0061 Score=61.59 Aligned_cols=51 Identities=10% Similarity=-0.005 Sum_probs=35.9
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchH-------HHHHHHHHhCCCCCCcEEEEecCCC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKS-------DFIEIMKEYAPKLPRKGVIHSFDGT 177 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~-------d~l~iLk~~~~~~~~~~v~H~FsG~ 177 (487)
.+.|++++++|+++++||.+|+..... ++++.+++.+. .+...+.||+..+
T Consensus 197 ~~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~ 254 (403)
T 2qt3_A 197 EGSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIENGY-KGRVTTSHAWCFA 254 (403)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHHTTC-TTSEEEEECTHHH
T ss_pred HHHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHHcCC-CCCeEEEehhhhc
Confidence 378999999999999999999997643 33555655543 1123577876543
No 77
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=97.41 E-value=8e-05 Score=71.58 Aligned_cols=76 Identities=29% Similarity=0.437 Sum_probs=57.8
Q ss_pred ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhhhCCCC
Q psy4448 245 NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPED 324 (487)
Q Consensus 245 n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iPld 324 (487)
+...|.+.|+.|+++|+++|+||+||++.+..+++++++++... ..++|.|+|+|+.+ ...++++. .
T Consensus 103 ~~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~~~~l~~~p~~-~~~~i~H~~~g~~~---------~~~~~l~~---~ 169 (265)
T 2gzx_A 103 PADVQKEVFRKQIALAKRLKLPIIIHNREATQDCIDILLEEHAE-EVGGIMHSFSGSPE---------IADIVTNK---L 169 (265)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCHHHHHHHHHHTTGG-GTCEEETTCCSCHH---------HHHHHHHT---S
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEecccHHHHHHHHHhcCCC-CCcEEEEcCCCCHH---------HHHHHHHH---C
Confidence 35789999999999999999999999999999999999997411 13568999998421 12234431 3
Q ss_pred ceEeccCCC
Q psy4448 325 RLLLETDCP 333 (487)
Q Consensus 325 rlLlETD~P 333 (487)
++.+++.+.
T Consensus 170 ~~y~~~sg~ 178 (265)
T 2gzx_A 170 NFYISLGGP 178 (265)
T ss_dssp CCEEEECGG
T ss_pred CceEEecce
Confidence 677777764
No 78
>1gkp_A Hydantoinase; hydrolase, dihydropyrimidinase, cyclic amidase; HET: KCX EPE; 1.29A {Thermus SP} SCOP: b.92.1.3 c.1.9.6 PDB: 1gkq_A*
Probab=97.27 E-value=0.00064 Score=70.27 Aligned_cols=128 Identities=17% Similarity=0.209 Sum_probs=76.2
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhc--CCCeEEEeecCCCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQS--DERLYSTVGCHPTR 78 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~--~~~v~~avGiHP~~ 78 (487)
+||+|+|+... +.+ ....+++......+...||+.++.++.. ..+....++...+ ....+..+|+|+..
T Consensus 54 lID~H~H~~~~-~~~------~~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (458)
T 1gkp_A 54 FIDPHVHIYLP-FMA------TFAKDTHETGSKAALMGGTTTYIEMCCPSRNDDALEGYQLWKSKAEGNSYCDYTFHMAV 126 (458)
T ss_dssp EEEEEECSSCE-ETT------EECSCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEEC
T ss_pred EEecccCCCcC-CCC------CcCHhHHHHHHHHHHhCCccEEEeCCCCCCCCCHHHHHHHHHHHhccCceeeEEEEEee
Confidence 89999999864 100 0014567666667778999988876542 2233333221111 12233346777533
Q ss_pred CCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 79 CSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 79 ~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
.. . .++.++.+++++.. .+..+ ++++++.. . .....+.+.+.+++|+++++||.+|+..
T Consensus 127 ~~-~---~~~~~~~~~~~~~~---g~~~~-~~~~~~~~-~---~~~~~~~l~~~~~~a~~~~~~v~~H~e~ 185 (458)
T 1gkp_A 127 SK-F---DEKTEGQLREIVAD---GISSF-KIFLSYKN-F---FGVDDGEMYQTLRLAKELGVIVTAHCEN 185 (458)
T ss_dssp CC-C---CTTHHHHHHHHHHT---TCCEE-EEEECSTT-T---TBCCHHHHHHHHHHHHHHTCEEEEEESC
T ss_pred cC-C---chhhHHHHHHHHHh---CCCEE-EEEeccCC-C---cCCCHHHHHHHHHHHHhcCCEEEEEcCC
Confidence 21 1 12346777777754 34555 77787642 1 1224567889999999999999999954
No 79
>1xrt_A Dihydroorotase, dhoase; amidohydrolase, metalloenzyme, pyrimidine; 1.61A {Aquifex aeolicus} SCOP: b.92.1.3 c.1.9.6 PDB: 1xrf_A 3d6n_A*
Probab=97.25 E-value=0.00031 Score=73.50 Aligned_cols=121 Identities=22% Similarity=0.268 Sum_probs=79.8
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC------HHhHHHHHHHHhcC--CCeEEEeec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN------VEDSISSLKLAQSD--ERLYSTVGC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~------~~~~~~~~~la~~~--~~v~~avGi 74 (487)
+||+|+|+....+ ...+++....+.+...||+.++..+.. .+.++...+.++.. .+++++.++
T Consensus 102 lID~H~H~~~~~~---------~~~~~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 172 (467)
T 1xrt_A 102 FIDIHVHLRDPGQ---------TYKEDIESGSRCAVAGGFTTIVCMPNTNPPIDNTTVVNYILQKSKSVGLCRVLPTGTI 172 (467)
T ss_dssp EEEEEECCCTTTC---------TTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEEEECBCS
T ss_pred EEEEeecccCCCC---------CchhhHHHHHHHHHhCCeEEEEecCCCCCCCChHHHHHHHHHHhcccCcceEEEEeee
Confidence 8999999976322 013577788888899999988877642 24556666665543 466766677
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~ 151 (487)
+|...... ++.+++++.. .++++|+.|.- ..+.+.|++++++|+++++|+.+|+.+..
T Consensus 173 ~~~~~~~~-------~~~~~~l~~~---g~~~i~~~~~~---------~~~~e~l~~~~~~A~~~g~~v~~H~~~~~ 230 (467)
T 1xrt_A 173 TKGRKGKE-------IADFYSLKEA---GCVAFTDDGSP---------VMDSSVMRKALELASQLGVPIMDHCEDDK 230 (467)
T ss_dssp BGGGCSSS-------BCCHHHHHHH---TCCCBCCTTSC---------CCCHHHHHHHHHHHHHHTCEEEECCCGGG
T ss_pred cCCCCccc-------HHHHHHHHHc---CCEEEEcCCCC---------CCCHHHHHHHHHHHHhcCCEEEEECCCHH
Confidence 76432211 2234445543 35667654421 12567899999999999999999998743
No 80
>2qs8_A XAA-Pro dipeptidase; amidohydrolase, TIM barrel, protein structure initiative, PSI-2, NYSGXRC, structural genomics; 2.33A {Alteromonas macleodii} SCOP: b.92.1.9 c.1.9.18
Probab=97.25 E-value=0.041 Score=55.95 Aligned_cols=56 Identities=7% Similarity=-0.063 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.|++.++.|.+.++||.+|+.+. ..+...++ .+ ...+.|++..+.+.++.+.+.
T Consensus 215 ~~~l~~~~~~A~~~g~~v~~H~~~~-~~i~~~~~-~g----~~~i~H~~~~~~~~i~~l~~~ 270 (418)
T 2qs8_A 215 QEEVDAVVSAAKDYGMWVAVHAHGA-EGMKRAIK-AG----VDSIEHGTFMDLEAMDLMIEN 270 (418)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECSH-HHHHHHHH-HT----CSEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEEEEEECCH-HHHHHHHH-cC----CCEEEECCCCCHHHHHHHHHC
Confidence 4568899999999999999999764 23434443 33 257999999998888887765
No 81
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=97.23 E-value=9e-05 Score=76.00 Aligned_cols=57 Identities=9% Similarity=0.058 Sum_probs=47.1
Q ss_pred ChhhhHHHHHHHHHHhhhCCCCEEEEeccchH--HHHHHHHHhCCCCCCCcEEE-EeeCC
Q psy4448 245 NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKS--DFIEIMKEYAPKLPRKGVIH-SFDGT 301 (487)
Q Consensus 245 n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~--~~l~il~~~~~~~~~~gv~h-sfsG~ 301 (487)
-.|.|+++|++|+++|+++|+||++|++.+.. +.+++|++........++.| +|+++
T Consensus 187 ~t~~E~k~frA~a~aa~etG~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d 246 (360)
T 3tn4_A 187 ITEYEKMFFRAAARAQKETGAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTD 246 (360)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCC
T ss_pred CCHHHHHHHHHHHHHHHHhCCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCC
Confidence 36899999999999999999999999999876 88999998765433345558 68885
No 82
>2ftw_A Dihydropyrimidine amidohydrolase; (beta-alpha)8-barrel, beta-sandwich; HET: KCX; 2.05A {Dictyostelium discoideum} SCOP: b.92.1.3 c.1.9.6
Probab=97.16 E-value=0.00052 Score=73.16 Aligned_cols=142 Identities=13% Similarity=0.040 Sum_probs=79.4
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-C-HHhHHHHHHHHhcC--CCeEEEeecCCCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-N-VEDSISSLKLAQSD--ERLYSTVGCHPTR 78 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~-~~~~~~~~~la~~~--~~v~~avGiHP~~ 78 (487)
+||+|+|+..... + ....+++....+.+...|++.++.++. + .....++++..... ......+|+|+..
T Consensus 62 lID~H~H~~~~~~-~------~~~~e~~~~~~~~a~~~G~Ttv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~ 134 (521)
T 2ftw_A 62 GIDTHTHFQLPFM-G------TVSVDDFDIGTQAAVAGGTTFIIDFVIPTRGQSLLEAYDQWKKWADEKVNCDYSLHVAI 134 (521)
T ss_dssp EEEEEECTTCEET-T------EECSSCHHHHHHHHHHTTEEEEEEEECCCTTCCHHHHHHHHHHHHHTTCSSEEEEEEEC
T ss_pred EEeeecccCcCCC-C------ccCHHHHHHHHHHHHhCCcceecCcCCCCCCcCHHHHHHHHHHHhhcCceeeEeeEEee
Confidence 8999999986421 0 001356777777788899988876542 1 13333333221111 2233456777532
Q ss_pred CCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch--HHHHH
Q psy4448 79 CSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK--SDFIE 156 (487)
Q Consensus 79 ~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~--~d~l~ 156 (487)
.. . .+...+++++++.+ . |..+++++.........+.+.|++.+++|+++++|+.+|+.... +..++
T Consensus 135 ~~-~---~~~~~~~l~~l~~~--~-----G~~~~k~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~vH~e~~~~~~~~~~ 203 (521)
T 2ftw_A 135 TW-W---SEQVSREMEILVKE--R-----GVNSFKCFMAYKNSFMVTDQEMYHIFKRCKELGAIAQVHAENGDMVFEGQK 203 (521)
T ss_dssp CS-C---CHHHHHHHHHHHHH--S-----CCCEEEEESSCTTTTBCCHHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHH
T ss_pred cC-C---ChhHHHHHHHHHHh--C-----CCCEEEEEeccCCCcCCCHHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHH
Confidence 21 1 12345677777754 1 22333322100111235678899999999999999999998643 23344
Q ss_pred HHHHhC
Q psy4448 157 IMKEYA 162 (487)
Q Consensus 157 iLk~~~ 162 (487)
.+.+.+
T Consensus 204 ~l~~~G 209 (521)
T 2ftw_A 204 KMLEMG 209 (521)
T ss_dssp HHHHTT
T ss_pred HHHHcC
Confidence 444443
No 83
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=97.15 E-value=0.00015 Score=70.58 Aligned_cols=55 Identities=15% Similarity=0.138 Sum_probs=41.5
Q ss_pred hhhhHHHHHHHHHHhhhCCCCEEEEe---ccchHHHHHHHHHhCCCCCCCcEEEE-eeCC
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPLFLHC---RNAKSDFIEIMKEYAPKLPRKGVIHS-FDGT 301 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl~iH~---r~a~~~~l~il~~~~~~~~~~gv~hs-fsG~ 301 (487)
.+.|+++|++|+++|+++++||++|+ +.+. +++++|++........++.|+ ++++
T Consensus 133 ~~~~~~~~~~~~~~a~~~~~pv~iH~~~~~~~~-~~~~~l~~~~~~~~~~~i~H~~~~~~ 191 (291)
T 1bf6_A 133 TPLEEKVFIAAALAHNQTGRPISTHTSFSTMGL-EQLALLQAHGVDLSRVTVGHCDLKDN 191 (291)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCEEEECGGGCSHH-HHHHHHHHTTCCGGGEEECCCCSSCC
T ss_pred CHHHHHHHHHHHHHHHHHCCeEEEeCCCCCChH-HHHHHHHHcCCCchhEEEECCCCCCC
Confidence 47899999999999999999999999 4444 889999885321112256788 4453
No 84
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=97.13 E-value=0.00078 Score=70.50 Aligned_cols=128 Identities=14% Similarity=0.081 Sum_probs=78.5
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC--HH----hHHHHHHHHhcCCCeEEEeecCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN--VE----DSISSLKLAQSDERLYSTVGCHP 76 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~--~~----~~~~~~~la~~~~~v~~avGiHP 76 (487)
+||+|+|+..+.. + ....+++......+...|++.++.++.. .. .++...+.++ ...+..+|+|+
T Consensus 54 ~ID~H~H~~~~~~-~------~~~~e~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~~~~~~~~ 124 (461)
T 3sfw_A 54 GIDPHTHLDMPFG-G------TVTSDNFFTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKAR--GKAVIDYGFHL 124 (461)
T ss_dssp EEEEEECTTCEET-T------EECSCCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHT--TTCSSEEEEEE
T ss_pred eEEeEeccCcCCC-C------cccHhHHHHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhh--cCcEEEEEEEE
Confidence 8999999986410 0 0114677777788889999988875431 22 2222233332 22333444444
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
.... . .++.++.+++++.+ ..+.+++ ++++|.. ....+.+.+.+.++.|+++++||.+|+++.
T Consensus 125 ~~~~-~---~~~~~~~~~~l~~~--~G~~~ik-~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~Hae~~ 187 (461)
T 3sfw_A 125 MVSD-A---NDHVLEELESVVNN--EGITSLK-VFMAYKN----VLMADDETLFKTLIRAKELGALVQVHAENG 187 (461)
T ss_dssp ECSC-C---CHHHHHHHHHHHHT--SCCCEEE-EESSSTT----TTBCCHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred EEeC-C---CHHHHHHHHHHHHh--CCCCEEE-EEEecCC----CcccCHHHHHHHHHHHHhcCCEEEEEcCCH
Confidence 3221 1 23557788888873 2567776 5666521 012345678899999999999999998864
No 85
>3gri_A Dihydroorotase, dhoase; hydrolase, IDP00795, metal-binding, pyrimidine biosynthesis, structural genomics; 2.00A {Staphylococcus aureus subsp}
Probab=97.07 E-value=0.00064 Score=70.35 Aligned_cols=121 Identities=15% Similarity=0.215 Sum_probs=75.9
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC------CHHhHHHHHHHHhcCC--CeEEEeec
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT------NVEDSISSLKLAQSDE--RLYSTVGC 74 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~------~~~~~~~~~~la~~~~--~v~~avGi 74 (487)
+||+|+|+...-+ ...+++....+.+...|++.++..+. ..+.++...+.++..+ ++++..++
T Consensus 54 ~iD~H~H~~~~g~---------~~~~~~~~~~~~~~~~G~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 124 (424)
T 3gri_A 54 FVDVHVHLREPGG---------EYKETIETGTKAAARGGFTTVCPMPNTRPVPDSVEHFEALQKLIDDNAQVRVLPYASI 124 (424)
T ss_dssp EEEEEECCCTTTC---------TTTCCHHHHHHHHHHTTEEEEEECSCSSSCSCSHHHHHHHHHHHHHHCSSEECCCEES
T ss_pred eEEeeecCCCCCC---------CCHHHHHHHHHHHHhCCEEEEeECcCCCCCCChHHHHHHHHHHhccCCCceEEEEEEE
Confidence 8999999986422 12467888888889999998887754 3556666666665533 23333333
Q ss_pred CCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch
Q psy4448 75 HPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK 151 (487)
Q Consensus 75 HP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~ 151 (487)
.+.... +.++.+.++... .+++++.-|. ...+.+.+++.+++|+++++||++|+++..
T Consensus 125 ~~~~~~-------~~l~~l~~l~~~---G~~~~~~~~~---------~~~~~~~l~~~~~~a~~~g~~v~~H~e~~~ 182 (424)
T 3gri_A 125 TTRQLG-------KELVDFPALVKE---GAFAFTDDGV---------GVQTASMMYEGMIEAAKVNKAIVAHCEDNS 182 (424)
T ss_dssp BGGGCS-------SSBCCHHHHHTT---TCCCEEECSS---------CCCSHHHHHHHHHHHHHHTCCEEECCCCGG
T ss_pred ecCCCc-------chHHHHHHHHhc---CcEEEecCCc---------CcCCHHHHHHHHHHHHhcCCEEEEeCCCHH
Confidence 332111 123345555543 3444432221 122567899999999999999999998753
No 86
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=96.67 E-value=0.02 Score=58.76 Aligned_cols=144 Identities=9% Similarity=-0.017 Sum_probs=77.9
Q ss_pred HHhcCCCEEEEECC-CH-----HhHHHHHHHHhcCC-CeEEEeecCCCC-------CCCcCCCchhhHHHHHHHHHhcC-
Q psy4448 37 AWNAGLEKIIVTGT-NV-----EDSISSLKLAQSDE-RLYSTVGCHPTR-------CSEFENDPEGYLQSLDKIIKEGG- 101 (487)
Q Consensus 37 a~~~GV~~ii~v~~-~~-----~~~~~~~~la~~~~-~v~~avGiHP~~-------~~~~~~~~~~~l~~L~~ll~~~~- 101 (487)
+...|++.+...+. .+ ...+..++.+++.+ ..+.+.|++-.. ........++.++...+++....
T Consensus 118 ~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~a~~~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 197 (456)
T 3ls9_A 118 SLLGGITTVADQHLFFPGATADSYIDATIEAATDLGIRFHAARSSMTLGKSEGGFCDDLFVEPVDRVVQHCLGLIDQYHE 197 (456)
T ss_dssp HHHTTEEEEEEEECCCCSSSCCTHHHHHHHHHHHHTCEEEEEECCCCCCGGGTCSSCGGGCCCHHHHHHHHHHHHHHHCC
T ss_pred HHhCCeeEEEeccccccCcccchhHHHHHHHHHHcCCEEEEEccccccccccccCCccccccCHHHHHHHHHHHHHHhhC
Confidence 56789998887732 22 33444455444433 344455553210 00011112344556666665421
Q ss_pred ---CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHH----------HHHHHHHhCCCCCCc
Q psy4448 102 ---KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSD----------FIEIMKEYAPKLPRK 168 (487)
Q Consensus 102 ---~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d----------~l~iLk~~~~~~~~~ 168 (487)
...+.++ ++....+ . .-.+.+++.+++|+++++|+.+|+-....+ .++.+.+.+...+..
T Consensus 198 ~~~~~~~~~~-~~~~~~~-~-----~~~~~l~~~~~~a~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 270 (456)
T 3ls9_A 198 PEPFGMVRIA-LGPCGVP-Y-----DKPELFEAFAQMAADYDVRLHTHFYEPLDAGMSDHLYGMTPWRFLEKHGWASDRV 270 (456)
T ss_dssp CSTTCSEEEE-ECCCCTT-T-----SCHHHHHHHHHHHHHHTCEEEEEECCTTHHHHHHHHHSSCHHHHHHHTTCSSTTE
T ss_pred cCCCCceEEE-EecCCCC-C-----CCHHHHHHHHHHHHHCCCCEEEEeCCCchHHHHHHHhCCCHHHHHHHcCCCCCCc
Confidence 1122222 3333211 1 123578999999999999999999875544 223444443222223
Q ss_pred EEEEecCCCHHHHHHHHcC
Q psy4448 169 GVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 169 ~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.||..-+.+.++.+.+.
T Consensus 271 ~i~H~~~~~~~~~~~l~~~ 289 (456)
T 3ls9_A 271 WLAHAVVPPREEIPEFADA 289 (456)
T ss_dssp EEEECCSCCGGGHHHHHHH
T ss_pred EEEeccCCCHHHHHHHHHc
Confidence 6789998888888777766
No 87
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=96.49 E-value=0.1 Score=54.64 Aligned_cols=62 Identities=8% Similarity=0.018 Sum_probs=45.4
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCC-------------CCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAP-------------KLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~-------------~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.+++..++|+++++||.+|.-....++-.+++.++. ..+...+.||.--+.++++.+.+.
T Consensus 242 ~e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~H~~~l~~~~~~~l~~~ 316 (476)
T 4aql_A 242 ETLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLYPSYKNYTSVYDKNNLLTNKTVMAHGCYLSAEELNVFHER 316 (476)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHCTTSSSHHHHHHTTTCCSTTEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHhCCCCCHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHc
Confidence 35688999999999999999998766655555444332 112235889999999888887776
No 88
>2vr2_A Dihydropyrimidinase; hydantoinase, metal-binding, disease mutation, dihydropyrimi amidohydrolase, nucleotide metabolism, DPYS, dhpase, hydrolase; 2.80A {Homo sapiens}
Probab=96.43 E-value=0.0031 Score=67.54 Aligned_cols=130 Identities=13% Similarity=0.118 Sum_probs=71.2
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC--HHhHHHHHHHHhc--CCCeEEEeecCCCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN--VEDSISSLKLAQS--DERLYSTVGCHPTR 78 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~--~~~~~~~~~la~~--~~~v~~avGiHP~~ 78 (487)
+||+|+|+..... | ....+++....+.+...|++.++.++.. ......+++.... .......+|+|...
T Consensus 85 ~ID~H~Hl~~~~~-----~--~~~~e~~~~~~~~al~~GvTtv~d~~~~~~~~~~~~a~~~~~~~~~~~~~~~~g~h~~~ 157 (541)
T 2vr2_A 85 GIDTHTHMQFPFM-----G--SRSIDDFHQGTKAALSGGTTMIIDFAIPQKGGSLIEAFETWRSWADPKVCCDYSLHVAV 157 (541)
T ss_dssp EEEEEECTTCBCS-----S--SBCSCCTTHHHHHHHTTTEEEEEEEECCCTTCCHHHHHHHHHHHHTTTCSSEEEEEEEE
T ss_pred EEEecccCCCCCC-----C--CcCHHHHHHHHHHHHhCCeeeeccccCCCCCCCHHHHHHHHHHHhccCceEEEeeeecc
Confidence 8999999976421 1 0013455556677788999888765322 1223333222111 12233356777421
Q ss_pred CCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 79 CSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 79 ~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
..+ .+...+++++++.. ..+..+ .+.+++. .....+.+.|++.++.|+++++++.+|+...
T Consensus 158 -~~~---~~~~~~el~~l~~~--~G~~~~-k~~~~~~----~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 218 (541)
T 2vr2_A 158 -TWW---SDQVKEEMKILVQD--KGVNSF-KMFMAYK----DLYMVTDLELYEAFSRCKEIGAIAQVHAENG 218 (541)
T ss_dssp -CSC---SHHHHHHHHHHHHT--SCCCEE-EEESSST----TTTBCCHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred -cCC---CHHHHHHHHHHHHh--CCCCEE-EEEeccC----CccCCCHHHHHHHHHHHHHcCCEEEEEcCCH
Confidence 111 12345677777653 122222 2222221 1123356778899999999999999999764
No 89
>2q09_A Imidazolonepropionase; 9252H, NYSGXRC, 3-(2, 5-dioxo-imidazo 4YL)-propionic acid, PSI-2 community, structural genomics, structure initiative; HET: DI6; 1.97A {Unidentified} SCOP: b.92.1.10 c.1.9.17 PDB: 2oof_A*
Probab=96.34 E-value=0.76 Score=46.45 Aligned_cols=58 Identities=10% Similarity=-0.095 Sum_probs=42.3
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchH-HHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKS-DFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~-d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.+++.++.|++.++||.+|+..... +.++.+.+.+. ..+.|++.-+.+.++.+.+.
T Consensus 222 ~~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~ 280 (416)
T 2q09_A 222 LAQTEQVYLAADQYGLAVKGHMDQLSNLGGSTLAANFGA----LSVDHLEYLDPEGIQALAHR 280 (416)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEESSSCCCSHHHHHHHTTC----SEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcEEEEECCCCchHHHHHHHHcCC----CEEeecccCCHHHHHHHHHc
Confidence 366888899999999999999975431 23444444432 46899998888888777665
No 90
>2i9u_A Cytosine/guanine deaminase related protein; protein structure initiative II (PSI-II), amidohydrol guanine deaminase; HET: GUN; 2.05A {Clostridium acetobutylicum} SCOP: b.92.1.4 c.1.9.9
Probab=96.24 E-value=0.07 Score=54.66 Aligned_cols=143 Identities=11% Similarity=0.101 Sum_probs=76.0
Q ss_pred HHHHhcCCCEEEEECC-CHHhHHHHHHHHhcCC-CeE---EEeecC-CCCCCCcCCCchhhHHHHHHHHHhcC--CCEEE
Q psy4448 35 NRAWNAGLEKIIVTGT-NVEDSISSLKLAQSDE-RLY---STVGCH-PTRCSEFENDPEGYLQSLDKIIKEGG--KKVVA 106 (487)
Q Consensus 35 ~ra~~~GV~~ii~v~~-~~~~~~~~~~la~~~~-~v~---~avGiH-P~~~~~~~~~~~~~l~~L~~ll~~~~--~~vva 106 (487)
..+...||+.+...+. .++....+++.+++.+ .++ ..++.| |.. +.+..+..++...+++.... ...+.
T Consensus 120 ~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~~~~~~~i~ 196 (439)
T 2i9u_A 120 KDLIKNGTTRVALFATLHKDSTIELFNMLIKSGIGAYVGKVNMDYNCPDY---LTENYITSLNDTEEIILKYKDKSNIVK 196 (439)
T ss_dssp HHHHHTTEEEEEEECCSCHHHHHHHHHHHHHHTCEEEEECEECCSSCCTT---SCCCHHHHHHHHHHHHHHHTTTCSSEE
T ss_pred HHHHhcCceEEEEccccccchHHHHHHHHHHcCCEEEEEeeeccccCCcc---cchhHHHHHHHHHHHHHHHhCCCCceE
Confidence 5677899998887654 4444445555444333 332 234555 421 11111123344445544310 11111
Q ss_pred EEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHH-------------HHHHHHHhCCCC-CCcEEEE
Q psy4448 107 FGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSD-------------FIEIMKEYAPKL-PRKGVIH 172 (487)
Q Consensus 107 IGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d-------------~l~iLk~~~~~~-~~~~v~H 172 (487)
+++.-.. ....-.+.+++.+++|++.++||.+|+-....+ .++.+++.+... +...+.|
T Consensus 197 ---~~~~~~~----~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~i~H 269 (439)
T 2i9u_A 197 ---PIITPRF----VPSCSNELMDGLGKLSYKYRLPVQSHLSENLDEIAVVKSLHKKSNFYGEVYDKFGLFGNTPTLMAH 269 (439)
T ss_dssp ---ECBEECC----GGGCCHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHCTTCSSHHHHHHHTTCSSSSCEEEEE
T ss_pred ---EEEecCC----cCcCCHHHHHHHHHHHHhcCCcEEEeecCChHHHHHHHHHhCCCCCHHHHHHHcCCCCCCCeEEEE
Confidence 1221000 011134678889999999999999999875433 233344443211 2234889
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
+..-+.+.++.+.+.
T Consensus 270 ~~~~~~~~~~~l~~~ 284 (439)
T 2i9u_A 270 CIHSSKEEINLIKRN 284 (439)
T ss_dssp CCSCCHHHHHHHHHT
T ss_pred EecCCHHHHHHHHHc
Confidence 998888888777665
No 91
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=95.98 E-value=0.095 Score=51.30 Aligned_cols=160 Identities=8% Similarity=-0.087 Sum_probs=77.9
Q ss_pred HHHHHHHHhcCCCEEEEECCCHHhHHH-HHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEe
Q psy4448 31 DHVLNRAWNAGLEKIIVTGTNVEDSIS-SLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGE 109 (487)
Q Consensus 31 ~~vl~ra~~~GV~~ii~v~~~~~~~~~-~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGE 109 (487)
+.+++-+++.+-...-+++++|..... +.++. +. . ..++|++++.......+ +..+..+-+++.+. +-.+.| =
T Consensus 83 ~~~~~~~~~~p~r~~g~~~v~P~~~~~eL~~l~-~~-g-v~Gi~l~~~~~~~~~~~-~~~~~~~~~~a~~~-glpv~i-H 156 (294)
T 4i6k_A 83 QAMLNAIQQYPDRLKGIAVVQHTTTFNELVNLK-AQ-G-IVGVRLNLFGLNLPALN-TPDWQKFLRNVESL-NWQVEL-H 156 (294)
T ss_dssp HHHHHHHHHSTTTEEEEECCCTTCCHHHHHHHH-TT-T-EEEEEEECTTSCCCCSS-SHHHHHHHHHHHHT-TCEEEE-E
T ss_pred HHHHHHHHHCCCeEEEEEEeCCcccHHHHHHHH-HC-C-CcEEEeccCCCCCCCcc-cHHHHHHHHHHHHc-CCEEEE-e
Confidence 345555555432233345777764333 33333 33 3 56889998643211001 12333333444432 223332 1
Q ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch-------HHHHHHHHHhCCCCCCcEEEEecCCCHHHHH
Q psy4448 110 FGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK-------SDFIEIMKEYAPKLPRKGVIHSFDGTPFQAV 182 (487)
Q Consensus 110 IGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~-------~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~ 182 (487)
+ ...| +...+++++++.+++|||.-... ..-.+.+.+... . ..++=.+||.....+
T Consensus 157 ~-----------~~~~---l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~-~--~nv~~k~Sg~~~~~~ 219 (294)
T 4i6k_A 157 A-----------PPKY---LVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSLLN-V--KQHWIKVSGFYRLGA 219 (294)
T ss_dssp C-----------CHHH---HHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHHHHHCC-T--TTEEEECCCGGGSSS
T ss_pred e-----------Ccch---HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHh-C--CCEEEEecccccccc
Confidence 1 1223 44567888888888998765531 112222222221 1 134445665422110
Q ss_pred ----HHHcCccchhHhhhcCCCceeeccCCCCCCC
Q psy4448 183 ----DSLKTKENLETVKSIPEDRLLLETDCPWCEV 213 (487)
Q Consensus 183 ----~~l~~~~g~e~v~~iP~driLlETD~P~l~~ 213 (487)
.......-.++++.+|.||||+|||+||+.+
T Consensus 220 ~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~ 254 (294)
T 4i6k_A 220 TPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQH 254 (294)
T ss_dssp TTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTC
T ss_pred cCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCC
Confidence 0000001236788899999999999999974
No 92
>3e74_A Allantoinase; (beta/alpha)8-barrel domain, small beta-sheet domain, hydrolase, metal-binding, purine metabolism, zinc; HET: KCX; 2.10A {Escherichia coli}
Probab=95.60 E-value=0.042 Score=57.76 Aligned_cols=124 Identities=15% Similarity=0.091 Sum_probs=65.0
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEEC--C-----CHHhHHHHHHHHhcCC--CeEEEee
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTG--T-----NVEDSISSLKLAQSDE--RLYSTVG 73 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~--~-----~~~~~~~~~~la~~~~--~v~~avG 73 (487)
+||+|+|+..+-+. ..+++......+...|++.++.+. + +.+..+...+.++... ++....|
T Consensus 75 ~iD~H~H~~~~g~~---------~~~~~~~~~~~~~~~G~Tt~~~~~~~t~p~~~~~~~~~~~~~~a~~~~~~d~~~~~~ 145 (473)
T 3e74_A 75 MVDAHTHISEPGRS---------HWEGYETGTRAAAKGGITTMIEMPLNQLPATVDRASIELKFDAAKGKLTIDAAQLGG 145 (473)
T ss_dssp EEEEEECC------------------CHHHHHHHHHHTTEEEEEECCSSSSSCSCSHHHHHHHHHHHTTTCSSEEEECEE
T ss_pred EEEEecccCCCCCC---------cHHHHHHHHHHHHhCCEEEEEcCcccCCCCcccHHHHHHHHHHhccCCeEEEEEEee
Confidence 89999999764321 145677777888899999888775 2 2344444444444322 3344444
Q ss_pred cCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCC---CCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 74 CHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRV---QYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 74 iHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~---~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
+.|.. ++.+.+++.. .+.++ -+.+++..- .......-.+.+.+.++.|+++++||.+|+.+.
T Consensus 146 ~~~~~-----------~~~l~~l~~~---G~~~~-K~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~H~e~~ 210 (473)
T 3e74_A 146 LVSYN-----------IDRLHELDEV---GVVGF-KCFVATCGDRGIDNDFRDVNDWQFFKGAQKLGELGQPVLVHCENA 210 (473)
T ss_dssp CCTTC-----------TTTHHHHHHH---TCSCE-EEEC------------CCCCHHHHHHHHHHHHHHTCCEEEECSCH
T ss_pred cccch-----------HHHHHHHHHc---CCCEE-EEeccccCCcccccccCCCCHHHHHHHHHHHHhcCCeEEEEecCH
Confidence 44422 2234455544 23333 122221100 000001124568888999999999999998864
No 93
>2paj_A Putative cytosine/guanine deaminase; NYSGXRC, PSI-II, amidohydrolase, sargasso SEA, enviro sample, structural genomics; 2.70A {Unidentified} SCOP: b.92.1.4 c.1.9.9
Probab=95.51 E-value=0.062 Score=55.89 Aligned_cols=147 Identities=8% Similarity=-0.040 Sum_probs=77.2
Q ss_pred HHHHhcCCCEEEEECC-CH-----HhHHHHHHHHhcCC-CeEEEeecC--CC--C---CC-CcCCCchhhHHHHHHHHHh
Q psy4448 35 NRAWNAGLEKIIVTGT-NV-----EDSISSLKLAQSDE-RLYSTVGCH--PT--R---CS-EFENDPEGYLQSLDKIIKE 99 (487)
Q Consensus 35 ~ra~~~GV~~ii~v~~-~~-----~~~~~~~~la~~~~-~v~~avGiH--P~--~---~~-~~~~~~~~~l~~L~~ll~~ 99 (487)
.++...||+.+...+. .+ +.++...+..++.+ .++.+.|.. |. + .. ......++.++.+++++..
T Consensus 124 ~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~g~r~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 203 (492)
T 2paj_A 124 IELARSGCATVADHNYVYYPGMPFDSSAILFEEAEKLGLRFVLLRGGATQTRQLEADLPTALRPETLDAYVADIERLAAR 203 (492)
T ss_dssp HHHHTTTEEEEEECCCCCCTTCSSCHHHHHHHHHHHTTCEEEEEECCCSCCCSCSTTSCGGGCCCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCcEEEEechhhcccccccchHHHHHHHHHHcCCEEEEEchhhcccccccccCCccccccCHHHHHHHHHHHHHH
Confidence 3377889998887653 33 24555555555443 444444432 10 0 00 0000112345666666654
Q ss_pred cCC----CEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHH-----------HHHHHHHhCCC
Q psy4448 100 GGK----KVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSD-----------FIEIMKEYAPK 164 (487)
Q Consensus 100 ~~~----~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d-----------~l~iLk~~~~~ 164 (487)
... ..+ ++++.... . ....-.+.+++.++.|++.++||.+|+-....+ .++.+.+.+..
T Consensus 204 ~~~~~~~~~~---~~~~~~~~--~-~~~~~~~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~g~~~~~~~~~~g~~ 277 (492)
T 2paj_A 204 YHDASPRAMR---RVVMAPTT--V-LYSISPREMRETAAVARRLGLRMHSHLSETVGYQDSAYSMYGKSPVAFCGEHDWL 277 (492)
T ss_dssp TCCCSTTCSE---EEEECCTT--T-TTSSCHHHHHHHHHHHHHTTCEEEEECC-------------CCCHHHHHHHTTCC
T ss_pred hccCCCCCce---EEEEeccc--C-CCCCCHHHHHHHHHHHHHcCCcEEEEeCCChHHHHHHHHHcCCCHHHHHHHCCCC
Confidence 321 111 22332211 0 001123568888999999999999999764322 33455554432
Q ss_pred CCCcEEEEecCCCHHHHHHHHcC
Q psy4448 165 LPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 165 ~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+...+.|+..-+.+.++.+.+.
T Consensus 278 ~~~~~i~H~~~~~~~~i~~l~~~ 300 (492)
T 2paj_A 278 GSDVWYAHLVKVDADEIALLAQT 300 (492)
T ss_dssp STTEEEESCCSCCHHHHHHHHHH
T ss_pred CCCcEEEEEecCCHHHHHHHHHc
Confidence 22235789998888888877765
No 94
>3v7p_A Amidohydrolase family protein; iron binding site, enzyme functio initiative, EFI; HET: TLA; 1.35A {Nitratiruptor SP}
Probab=95.43 E-value=0.049 Score=56.18 Aligned_cols=62 Identities=10% Similarity=-0.032 Sum_probs=43.4
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhC------------------------C-CCCCcEEEEecCCCHHH
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYA------------------------P-KLPRKGVIHSFDGTPFQ 180 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~------------------------~-~~~~~~v~H~FsG~~~~ 180 (487)
.+.+++.+++|+++++|+.+|.-....+.-.+.+.++ . ..+...+.||..-+.+.
T Consensus 186 ~e~l~~~~~~A~~~g~~v~~H~~E~~~e~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~H~~~~~~~~ 265 (427)
T 3v7p_A 186 YILAKRALDIAKKYGSLVSVHFMESRAEREWLDKGSGEFAKFFKEFLNQTRPVNDTKSFLELFKELHTLFVHMVWANEEE 265 (427)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHSCSHHHHHHHHHTCCCSCSSCHHHHHHTTTTSEEEEEECTTCCHHH
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCCHHHHHHHHHhcCcchhhhhhhccCCCcccCHHHHHhhhcCCCEEEEECCCCCHHH
Confidence 3468999999999999999999776554433322111 0 11123588999999999
Q ss_pred HHHHHcC
Q psy4448 181 AVDSLKT 187 (487)
Q Consensus 181 a~~~l~~ 187 (487)
++.+.+.
T Consensus 266 ~~~l~~~ 272 (427)
T 3v7p_A 266 IQTIASY 272 (427)
T ss_dssp HHHHHHS
T ss_pred HHHHHHc
Confidence 8888777
No 95
>2ood_A BLR3880 protein; PSI-II, PSI-2, guanine deaminase, guanine, structural genomics, protein structure initiative; HET: GUN; 2.62A {Bradyrhizobium japonicum} SCOP: b.92.1.4 c.1.9.9
Probab=95.41 E-value=0.14 Score=53.31 Aligned_cols=145 Identities=12% Similarity=0.093 Sum_probs=77.8
Q ss_pred HHHHHhcCCCEEEEEC-CCHHhHHHHHHHHhcC-CCeEEEeecCCCCC--C-CcCCCchhhHHHHHHHHHhcC-CCEEEE
Q psy4448 34 LNRAWNAGLEKIIVTG-TNVEDSISSLKLAQSD-ERLYSTVGCHPTRC--S-EFENDPEGYLQSLDKIIKEGG-KKVVAF 107 (487)
Q Consensus 34 l~ra~~~GV~~ii~v~-~~~~~~~~~~~la~~~-~~v~~avGiHP~~~--~-~~~~~~~~~l~~L~~ll~~~~-~~vvaI 107 (487)
+.++...||+.++..+ ..++..+.+.+.+++. .+++ +|.+.... . .+.+..++.++...+++.... ...+.+
T Consensus 124 ~~~~l~~GvTtv~~~~~~~~~~~~~~~~~~~~~g~r~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (475)
T 2ood_A 124 LDALLAAGTTTCQAFTSSSPVATEELFEEASRRNMRVI--AGLTGIDRNAPAEFIDTPENFYRDSKRLIAQYHDKGRNLY 201 (475)
T ss_dssp HHHHHHTTEEEEEEECCSSHHHHHHHHHHHHHHTCCEE--ECCEECCSSSCTTTCCCHHHHHHHHHHHHHHHTTBTTEEE
T ss_pred HHHHHhcCceEEEEecccCchhHHHHHHHHHHcCCeEE--EEeeecccCCCcccccCHHHHHHHHHHHHHHhccCCceEE
Confidence 5677889999888765 3566666666655543 3443 33322110 1 111112233445555555311 111222
Q ss_pred EeeCCCCCCCCCCChHHHHHHHHHHHHHhhhC-CCCEEEEecCchHHHH-------------HHHHHhCCCCCCcEEEEe
Q psy4448 108 GEFGLDYDRVQYCPVETQLKYFRKQLDLSVTH-KLPLFLHCRNAKSDFI-------------EIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 108 GEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el-~lPViIH~r~a~~d~l-------------~iLk~~~~~~~~~~v~H~ 173 (487)
+ ++..... ..-.+.+++.+++|+++ ++||.+|+-...+++. +++++.+...+...+.|+
T Consensus 202 ~-~~~~~~~------~~~~e~l~~~~~~a~~~~g~~v~~H~~e~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~i~H~ 274 (475)
T 2ood_A 202 A-ITPRFAF------GASPELLKACQRLKHEHPDCWVNTHISENPAECSGVLVEHPDCQDYLGVYEKFDLVGPKFSGGHG 274 (475)
T ss_dssp E-EEECBGG------GCCHHHHHHHHHHHHHCTTSEEEEECSCCHHHHHHHHHHCTTCSSHHHHHHTTTCCSTTEEEECC
T ss_pred E-EeccccC------cCCHHHHHHHHHHHHhCCCCcEEEeeCCChHHHHHHHHHcCCCccHHHHHHHcCCCCCCcEEEEe
Confidence 1 1222111 11235677889999999 9999999986554433 333333211111247899
Q ss_pred cCCCHHHHHHHHcC
Q psy4448 174 FDGTPFQAVDSLKT 187 (487)
Q Consensus 174 FsG~~~~a~~~l~~ 187 (487)
..-+.+.++.+.+.
T Consensus 275 ~~~~~~~i~~~~~~ 288 (475)
T 2ood_A 275 VYLSNNEFRRMSKK 288 (475)
T ss_dssp TTCCHHHHHHHHHH
T ss_pred ecCCHHHHHHHHHc
Confidence 98888888777665
No 96
>3mdu_A N-formimino-L-glutamate iminohydrolase; amonohydralase family, N-formimino-L-glutamate iminohydrolas guanidino-L-glutamate; HET: NGQ; 1.40A {Pseudomonas aeruginosa} PDB: 3mdw_A*
Probab=95.39 E-value=0.39 Score=49.60 Aligned_cols=61 Identities=13% Similarity=0.206 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHH-----------HHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEI-----------MKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~i-----------Lk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.|++..++|+ .++||.+|+-....++..+ +.+.+...+...+.||..-+.++++.+.+.
T Consensus 213 ~e~l~~~~~~A~-~g~~v~~H~~e~~~e~~~~~~~~g~~~v~~l~~~g~~~~~~~~~H~~~~~~~~i~~la~~ 284 (453)
T 3mdu_A 213 PQQIATVLAAGH-DDLPVHIHIAEQQKEVDDCQAWSGRRPLQWLYENVAVDQRWCLVHATHADPAEVAAMARS 284 (453)
T ss_dssp HHHHHHHHTSSC-TTSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHh-cCCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEcCCCCHHHHHHHHHc
Confidence 345778889999 9999999986655444333 333332222246789999999998888776
No 97
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=95.22 E-value=0.094 Score=55.41 Aligned_cols=127 Identities=13% Similarity=0.107 Sum_probs=71.1
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-CH-----HhHHHHHHHHhcCCCeEEEeecCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-NV-----EDSISSLKLAQSDERLYSTVGCHP 76 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~~-----~~~~~~~~la~~~~~v~~avGiHP 76 (487)
+||+|+|+..+-+. ....+++......+...|++.++.... .+ +..+...+.++ ....-+++|.
T Consensus 52 ~ID~H~H~~~~~~~-------~~~~e~~~~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~---~~~~d~~~~~ 121 (490)
T 3dc8_A 52 GIDPHTHLEMPFMG-------TYSSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKST---RANCDYSFHM 121 (490)
T ss_dssp EEEEEECTTCEETT-------EECSCCHHHHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTT---TCSSEEEEEE
T ss_pred EEeeccccCCCCCC-------CCCHHHHHHHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhh---cccceeeeEE
Confidence 89999999765320 012467877777888899988876532 22 22333333333 2222333333
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
.... . .++.++++.+++.+ ..+.+++- -++|.. .. -...+.+.+.++.|+++++||.+|+.+.
T Consensus 122 ~~~~-~---~~~~l~el~~l~~~--~G~~~~k~-~~~~~~-~~---~~~~~~l~~~~~~a~~~g~~v~~HaE~~ 184 (490)
T 3dc8_A 122 AITW-W---GEQVFNEMETIVKD--KGINTFKH-FMAYKG-AL---MVDDDEMFSSFQRCAALGALPLVHAENG 184 (490)
T ss_dssp ECCS-C---SHHHHHHHHHHHHH--SCCCEEEE-ESCSTT-TT---BCCHHHHHHHHHHHHHHTCEEEEECSCH
T ss_pred EEec-C---cHHHHHHHHHHHHh--CCCCEEEE-EecCCC-Cc---cCCHHHHHHHHHHHHhcCCEEEEecCCh
Confidence 2111 1 13446778887733 24445532 233321 10 1123457889999999999999997653
No 98
>3gip_A N-acyl-D-glutamate deacylase; amidohydrolase family, hydrolase; 1.50A {Bordetella bronchiseptica} PDB: 3giq_A*
Probab=95.22 E-value=0.075 Score=55.77 Aligned_cols=71 Identities=17% Similarity=0.209 Sum_probs=43.6
Q ss_pred hhHHHHHHHHHhc-CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-------chHHHHHHHH
Q psy4448 88 GYLQSLDKIIKEG-GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-------AKSDFIEIMK 159 (487)
Q Consensus 88 ~~l~~L~~ll~~~-~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-------a~~d~l~iLk 159 (487)
+.++.+.+++.+- ...++++. +|+.|.. . .....+-+.+.++.|++++.++++|+++ +..+++++.+
T Consensus 164 ~~l~~m~~l~~~~~~~Ga~g~~-~~~~y~p-~---~~~~~~el~~~~~~a~~~g~~v~~H~~~~~~~~~~a~~e~i~la~ 238 (480)
T 3gip_A 164 AEQQAMQDMLQAALEAGAVGFS-TGLAYQP-G---AVAQAAELEGLARVAAERRRLHTSHIRNEADGVEAAVEEVLAIGR 238 (480)
T ss_dssp HHHHHHHHHHHHHHHHTCCEEE-EETTSTT-G---GGCCHHHHHHHHHHHHHTTCEEEEECSCSSTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCcEEe-ecCccCC-c---ccCCHHHHHHHHHHHHHcCCEEEEEecCccccHHHHHHHHHHHHH
Confidence 4466666666310 01455663 5676643 1 1123344556669999999999999986 4567777777
Q ss_pred HhCC
Q psy4448 160 EYAP 163 (487)
Q Consensus 160 ~~~~ 163 (487)
+.+.
T Consensus 239 ~~g~ 242 (480)
T 3gip_A 239 GTGC 242 (480)
T ss_dssp HHCC
T ss_pred HhCC
Confidence 6643
No 99
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=95.09 E-value=0.0085 Score=57.77 Aligned_cols=72 Identities=22% Similarity=0.350 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHhhhC-CCCEEEEec-----cchHHHHHHHHHhCCCCCCCcEEEEeeCCcccccccccchhhHHHhhhCC
Q psy4448 249 NIVYFRKQLDLSVTH-KLPLFLHCR-----NAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIP 322 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~-~lPl~iH~r-----~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iP 322 (487)
|...|+.|+++|+++ ++||+||++ .+..++.++++++. ...++|++.|... . .+.+++++..
T Consensus 128 ~~~~~~~~~~~a~~~~~lpv~iH~~~~~~~~~~~~~~~~l~~~p----~l~iv~~H~G~~~-----~--~~~~~~~~~~- 195 (272)
T 3cjp_A 128 QIKSLKPIFKYSMDSGSLPIWIHAFNPLVLQDIKEIAELCKAFP----KVPVILGHMGGSN-----W--MTAVELAKEI- 195 (272)
T ss_dssp CGGGGHHHHHHHHHTTCCCEEECCSTTCCHHHHHHHHHHHHHST----TSCEEEGGGGGGG-----H--HHHHHHHHHC-
T ss_pred ccHHHHHHHHHHHhccCCcEEEeCCCCCccccHHHHHHHHHHCC----CceEEEECCCCcc-----H--HHHHHHHHhC-
Confidence 778999999999999 999999999 58899999999872 2348999999531 0 1233455544
Q ss_pred CCceEeccCCC
Q psy4448 323 EDRLLLETDCP 333 (487)
Q Consensus 323 ldrlLlETD~P 333 (487)
.++.+.|.+.
T Consensus 196 -~~~y~~~s~~ 205 (272)
T 3cjp_A 196 -QNLYLDTSAY 205 (272)
T ss_dssp -TTEEEECTTC
T ss_pred -CCEEEEeccc
Confidence 4788877654
No 100
>4ac7_C Urease subunit alpha; hydrolase, bacillus pasteurii; HET: CXM KCX FLC; 1.50A {Sporosarcina pasteurii} PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 4ubp_C* 1ie7_C*
Probab=95.08 E-value=0.041 Score=59.50 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=64.6
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC-------------HHhHHHHHHHHhcCCCeE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN-------------VEDSISSLKLAQSDERLY 69 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~-------------~~~~~~~~~la~~~~~v~ 69 (487)
+||+|+|+..+.+ ...|...|++.++.-+++ +...+..++.++..+-
T Consensus 133 ~ID~HvH~~~Pg~------------------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v-- 192 (570)
T 4ac7_C 133 GIDTHVHFINPDQ------------------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPI-- 192 (570)
T ss_dssp EEEEEEECCCTTH------------------HHHHHHTTEEEEEEECSSSCHHHHHSSCCCHHHHHHHHHHHHTTCSS--
T ss_pred EEecccccCCcch------------------HHHHHhcCCeEEEecCcCcccccCCcCcCCcHHHHHHHHHHhhhCCe--
Confidence 7999999976432 246778899988854432 2334444555555442
Q ss_pred EEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 70 STVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 70 ~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
-+|+|.... ...++.|.+++.. .++++.-- .|+. ...+.+++.+++|.++++||++|+..
T Consensus 193 -~~~~~g~~~-------~~~l~el~el~~a---Ga~gfK~~-~~~~--------~~~~~L~~aL~~A~~~g~~V~iHae~ 252 (570)
T 4ac7_C 193 -NVGILGKGH-------GSSIAPIMEQIDA---GAAGLKIH-EDWG--------ATPASIDRSLTVADEADVQVAIHSDT 252 (570)
T ss_dssp -EEEEEEECC-------CSSHHHHHHHHHH---TCCEEEEE-GGGC--------CCHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred -eEEEEeccC-------CcCHHHHHHHHHc---CCCeEeec-cCCC--------CCHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 223332111 1125667777665 34444321 2321 13567899999999999999999985
No 101
>4ubp_C Protein (urease (chain C)); bacillus pasteurii, nickel, acetohydroxamic acid, metalloenzyme, hydrolase; HET: KCX; 1.55A {Sporosarcina pasteurii} SCOP: b.92.1.1 c.1.9.2 PDB: 1s3t_C* 2ubp_C* 3ubp_C* 1ubp_C* 1ie7_C*
Probab=95.08 E-value=0.041 Score=59.50 Aligned_cols=107 Identities=13% Similarity=0.125 Sum_probs=64.6
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC-------------HHhHHHHHHHHhcCCCeE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN-------------VEDSISSLKLAQSDERLY 69 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~-------------~~~~~~~~~la~~~~~v~ 69 (487)
+||+|+|+..+.+ ...|...|++.++.-+++ +...+..++.++..+-
T Consensus 133 ~ID~HvH~~~Pg~------------------~~aAl~gGvTTvv~gg~~p~~~~n~~p~~~~~~~l~~~l~aa~~~~v-- 192 (570)
T 4ubp_C 133 GIDTHVHFINPDQ------------------VDVALANGITTLFGGGTGPAEGSKATTVTPGPWNIEKMLKSTEGLPI-- 192 (570)
T ss_dssp EEEEEEECCCTTH------------------HHHHHHTTEEEEEEECCSSCHHHHHSSCCCHHHHHHHHHHHHTTCSS--
T ss_pred EEEcccCCCCcch------------------HHHHHhcCCeEEEecCccccccCCCcCCCCcHHHHHHHHHHhhhCCe--
Confidence 7999999976432 246778899988854432 2334444555555442
Q ss_pred EEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 70 STVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 70 ~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
-+|+|.... ...++.|.+++.. .++++.-- .|+. ...+.+++.+++|.++++||++|+..
T Consensus 193 -~~~~~g~~~-------~~~l~el~el~~a---Ga~gfK~~-~~~~--------~~~~~L~~aL~~A~~~g~~V~iHae~ 252 (570)
T 4ubp_C 193 -NVGILGKGH-------GSSIAPIMEQIDA---GAAGLKIH-EDWG--------ATPASIDRSLTVADEADVQVAIHSDT 252 (570)
T ss_dssp -EEEEEEECC-------CSSHHHHHHHHHH---TCCEEEEE-GGGC--------CCHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred -eEEEEeccC-------CcCHHHHHHHHHc---CCCeEeec-cCCC--------CCHHHHHHHHHHHHHcCCEEEEEcCC
Confidence 223332111 1125667777665 34444321 2321 13567899999999999999999985
No 102
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=94.15 E-value=0.97 Score=46.37 Aligned_cols=54 Identities=7% Similarity=-0.144 Sum_probs=40.4
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHH
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSL 185 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l 185 (487)
.+.+++.++.|.++++||.+|+... +.+...+ +.+. ..+.|++..+.+.++.+.
T Consensus 226 ~~~l~~~~~~a~~~g~~v~~H~~~~-~~i~~~~-~~G~----~~i~H~~~~~~~~~~~~~ 279 (458)
T 2p9b_A 226 VEQMRAICDEAHQYGVIVGAHAQSP-EGVRRSL-LAGV----DTIEHGSVLDDELIGMFR 279 (458)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSH-HHHHHHH-HHTC----SEEEECCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCeEEEEeCCH-HHHHHHH-HcCC----CEEEECCCCCHHHHHHHh
Confidence 4668889999999999999999753 3333334 3332 578999999988777766
No 103
>2imr_A Hypothetical protein DR_0824; zinc, NYSGXRC, PSI2, structural genomics, protein structure initiative; 1.78A {Deinococcus radiodurans} SCOP: b.92.1.11 c.1.9.16
Probab=93.71 E-value=1.1 Score=45.36 Aligned_cols=23 Identities=13% Similarity=0.057 Sum_probs=19.7
Q ss_pred hCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 385 RGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 385 kg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+++++++.+..+.|.-++|++.
T Consensus 376 ~~ls~~~al~~aT~n~A~~lgl~ 398 (420)
T 2imr_A 376 PGLDPRVLVRAAVKGGQRVVGGR 398 (420)
T ss_dssp TTSCHHHHHHHHHHHHHHHHC--
T ss_pred CCCCHHHHHHHHHHHHHHHhCCC
Confidence 48999999999999999999986
No 104
>3iv8_A N-acetylglucosamine-6-phosphate deacetylase; IDP01334, fruct phosphate, carbohydrate metabolism, hydrolase; HET: F6P; 2.53A {Vibrio cholerae} PDB: 3egj_A*
Probab=93.67 E-value=0.92 Score=46.46 Aligned_cols=39 Identities=5% Similarity=0.043 Sum_probs=33.2
Q ss_pred ccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 370 EPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 370 ~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
.-..+...++.+.+..|++++++.+..+.|..+++++..
T Consensus 309 s~l~l~~~v~~~v~~~g~~~~~al~~aT~~pA~~lg~~~ 347 (381)
T 3iv8_A 309 SALTMIEAVQNTVEHVGIALDEALRMATLYPAKAIGVDE 347 (381)
T ss_dssp BCCCHHHHHHHHHHTTCCCHHHHHHHHTHHHHHHHTCTT
T ss_pred hhhhHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHhCCCC
Confidence 455678888888787899999999999999999999863
No 105
>1nfg_A D-hydantoinase; TIM barrel, hydrolase; HET: KCX; 2.70A {Ralstonia pickettii} SCOP: b.92.1.3 c.1.9.6
Probab=93.65 E-value=0.21 Score=51.28 Aligned_cols=126 Identities=14% Similarity=0.125 Sum_probs=63.3
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCC-H-----HhHHHHHHHHhcCCCeEEEeecCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTN-V-----EDSISSLKLAQSDERLYSTVGCHP 76 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~-~-----~~~~~~~~la~~~~~v~~avGiHP 76 (487)
+||+|+|+...... ....+++......+...||+.++..+.. + +..+...+.+.... ..-+|+|-
T Consensus 53 lID~H~H~~~~~~~-------~~~~e~~~~~~~~~~~~GvTtv~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 123 (457)
T 1nfg_A 53 GIDVHTHVETVSFN-------TQSADTFATATVAAACGGTTTIVDFCQQDRGHSLAEAVAKWDGMAGGKS--AIDYGYHI 123 (457)
T ss_dssp EEEEEECCSCEETT-------EECSCCHHHHHHHHHHTTEEEEEEEEECCTTSCHHHHHHHHHHHHTTTC--SSEEEEEE
T ss_pred eEeeccccccCcCC-------CCChhhHHHHHHHHHhCCcEEEEeCCCCCCCCChHHHHHHHHHHhcccC--ccCEEEEE
Confidence 89999999732110 0013566656667778999988876432 2 12222222222211 22244442
Q ss_pred CCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 77 TRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 77 ~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
.... . ..+..+.+++++.. .+.++ .+.+++.. .... -.+.+.+.++.|++++++|.+|+..
T Consensus 124 ~~~~-~---~~~~~~~~~~~~~~---G~~~~-k~~~~~~~-~~~~---~~~~~~~~~~~a~~~~~~v~~H~e~ 184 (457)
T 1nfg_A 124 IVLD-P---TDSVIEELEVLPDL---GITSF-KVFMAYRG-MNMI---DDVTLLKTLDKAVKTGSLVMVHAEN 184 (457)
T ss_dssp ECSS-C---CHHHHHHTTTGGGG---TCCEE-EEESSSTT-TTBC---CHHHHHHHHHHHHHHTCEEEEECCC
T ss_pred eecC-C---chhHHHHHHHHHHc---CCCEE-EEeeccCC-CCCC---CHHHHHHHHHHHHhcCCEEEEeCCC
Confidence 1111 1 11223444444332 34555 34444421 0000 1234555678888899999999965
No 106
>3pnu_A Dihydroorotase; TIM barrel, zinc binding, hydrolase, structu genomics, center for structural genomics of infectious DISE csgid; HET: KCX; 2.40A {Campylobacter jejuni subsp}
Probab=93.63 E-value=3.6 Score=41.61 Aligned_cols=38 Identities=16% Similarity=0.274 Sum_probs=27.8
Q ss_pred CccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 369 NEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 369 n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
..+..++.+.+.+ + .+.+++.+.+.++.|..++|++..
T Consensus 281 ~~~~~L~l~~~~~-~-~~~~l~~lv~~~s~nPAki~gL~~ 318 (359)
T 3pnu_A 281 SAPVILPVLAELF-K-QNSSEENLQKFLSDNTCKIYDLKF 318 (359)
T ss_dssp CGGGHHHHHHHHH-H-HHSCHHHHHHHHTHHHHHHHTCCC
T ss_pred hHHHHHHHHHHHH-h-hcCCHHHHHHHHHHhHHHHhCCCC
Confidence 3444555555544 2 346899999999999999999963
No 107
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=93.25 E-value=0.22 Score=50.37 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=34.2
Q ss_pred CccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 369 NEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 369 n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
+.+..+...++.+.+..+++.+++.+..+.|..++|++..
T Consensus 302 g~~~~l~~~l~~~~~~~~~~~~~~l~~~T~~~A~~lgl~~ 341 (376)
T 1o12_A 302 GSTLFFSQAVKNFRKFTGCSITELAKVSSYNSCVELGLDD 341 (376)
T ss_dssp CBCCCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCTT
T ss_pred ccccCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 4556788888887777899999999999999999999863
No 108
>1ra0_A Cytosine deaminase; alpha-beta barrel, hexamer, conformation change, D314G mutant, hydrolase; 1.12A {Escherichia coli} SCOP: b.92.1.2 c.1.9.5 PDB: 1r9x_A 1ra5_A 1r9y_A 1r9z_A 1rak_A 3r0d_A* 3o7u_A* 3rn6_A* 1k6w_A 1k70_A 3g77_A
Probab=93.11 E-value=0.93 Score=46.02 Aligned_cols=63 Identities=10% Similarity=0.044 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHhhhCCCCEEEEecCch-------HHHHHHHHHhCCCCCCcEEEEecCCCHH-------HHHHHHcC
Q psy4448 124 TQLKYFRKQLDLSVTHKLPLFLHCRNAK-------SDFIEIMKEYAPKLPRKGVIHSFDGTPF-------QAVDSLKT 187 (487)
Q Consensus 124 ~Q~~vF~~qL~LA~el~lPViIH~r~a~-------~d~l~iLk~~~~~~~~~~v~H~FsG~~~-------~a~~~l~~ 187 (487)
.-.+.|++.+++|+++++||.+|+.... +...+.+.+.+. .+.-.+.|+...+.+ .++.+.+.
T Consensus 196 ~~~~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~~~~~~~~~~~~~i~~~~~~ 272 (430)
T 1ra0_A 196 YGVESLHKTFALAQKYDRLIDVHCDEIDDEQSRFVETVAALAHHEGM-GARVTASHTTAMHSYNGAYTSRLFRLLKMS 272 (430)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECCSSCTTCCHHHHHHHHHHHHTC-GGGEEEEECGGGGGSCHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHcCCCEEEEECCCCchhHHHHHHHHHHHHHhCC-CCCEEEEeccccccCChHhHHHHHHHHHHc
Confidence 5667899999999999999999996532 233455555543 212357899876543 55555444
No 109
>1e9y_B Urease subunit beta; hydrolase, dodecamer; HET: KCX; 3.00A {Helicobacter pylori} SCOP: b.92.1.1 c.1.9.2 PDB: 1e9z_B* 3qga_C* 3qgk_C*
Probab=92.91 E-value=0.34 Score=52.27 Aligned_cols=106 Identities=18% Similarity=0.190 Sum_probs=63.3
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCH-------------HhHHHHHHHHhcCC-Ce
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNV-------------EDSISSLKLAQSDE-RL 68 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~-------------~~~~~~~~la~~~~-~v 68 (487)
+||+|+|+..+. .+..+-..||+.++..++.+ ...+..++.++..+ ++
T Consensus 132 lID~HvHl~~p~------------------~~~~al~~GvTTv~d~g~~p~~~t~~~~~~~g~~~l~~~~~a~~~~~~~~ 193 (569)
T 1e9y_B 132 GIDTHIHFISPQ------------------QIPTAFASGVTTMIGGGTGPADGTNATTITPGRRNLKWMLRAAEEYSMNL 193 (569)
T ss_dssp EEEEEEETTCTT------------------HHHHHHHTTEEEEEEECCSSCHHHHHCCCCCHHHHHHHHHHHHTTSSSEE
T ss_pred EEEEeecCCCcH------------------HHHHHHhCCeeEEEcCCcCCCCCCcCcccCCcHHHHHHHHHHhcccCceE
Confidence 799999987531 14677889999999886543 23344455555444 22
Q ss_pred EEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEec
Q psy4448 69 YSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR 148 (487)
Q Consensus 69 ~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r 148 (487)
. ..|-+. . ...+.+++++.. .+.++. +..++. .-.+.+++.++.|.++++||.+|+.
T Consensus 194 ~-~~g~g~--~--------~~~~~l~e~~~~---Ga~gik-~~~~~~--------~t~e~l~~~l~~A~~~g~~V~iHa~ 250 (569)
T 1e9y_B 194 G-FLAKGN--A--------SNDASLADQIEA---GAIGFK-IHEDWG--------TTPSAINHALDVADKYDVQVAIHTD 250 (569)
T ss_dssp E-EEEECC--C--------SCHHHHHHHHHT---TCSEEE-ECGGGC--------CCHHHHHHHHHHHHHTTCEEEECCC
T ss_pred E-EECCCC--c--------CCHHHHHHHHHc---CCCEEE-ecCCCC--------CCHHHHHHHHHHHHHhCCEEEEEcC
Confidence 2 222111 0 113456666654 233442 112211 1246788899999999999999997
Q ss_pred C
Q psy4448 149 N 149 (487)
Q Consensus 149 ~ 149 (487)
.
T Consensus 251 ~ 251 (569)
T 1e9y_B 251 T 251 (569)
T ss_dssp T
T ss_pred C
Confidence 5
No 110
>2fty_A Dihydropyrimidinase; alpha/beta barrel, beta-sandwich, hydrolase; HET: KCX; 2.40A {Lachancea kluyveri} SCOP: b.92.1.3 c.1.9.6 PDB: 2fvk_A* 2fvm_A*
Probab=90.92 E-value=0.21 Score=53.66 Aligned_cols=132 Identities=14% Similarity=0.153 Sum_probs=69.3
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCH-----Hh-HHHHH----HHHhcCCCeEEEe
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNV-----ED-SISSL----KLAQSDERLYSTV 72 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~-----~~-~~~~~----~la~~~~~v~~av 72 (487)
+||+|+|+....+. .+ ...+++......+...|++.++.++... .+ ...++ +..... ..+..+
T Consensus 57 lID~H~H~~~~~~~---~~---~~~e~~~~~~~~~l~~GvTtv~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~d~ 129 (559)
T 2fty_A 57 GIDAHVHVDEPLKL---LG---DVVDTMEHATRSAVAGGTTTVVAFSTQDVSKKGPSALAESVKLDVDEYSEQ-TLYCDY 129 (559)
T ss_dssp EEECCBCCCCTTCT---TS---CCSCCHHHHHHHHHHTTEEEEEEEEECCTTCCSTTHHHHHHHHHHHHHTTS-CCSSEE
T ss_pred EEeeccCcCccccc---cC---CCHHHHHHHHHHHHhCcEEEEEECcCcccCCcchHHHHHHHHHHHHHHHhh-cceeEE
Confidence 89999999864210 00 1245666666777899999888775321 22 44444 322211 111122
Q ss_pred ecCCCCCCCcCCCchh---hH-HHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEec
Q psy4448 73 GCHPTRCSEFENDPEG---YL-QSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR 148 (487)
Q Consensus 73 GiHP~~~~~~~~~~~~---~l-~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r 148 (487)
|+|-.... .....++ .+ +.+.+++.+. .+.+| -+.+.+.. . ..-.+.+++.+++|+++++||.+|+.
T Consensus 130 ~~~~~~~~-~~~~~~~~g~~l~~~~~~l~~~~--G~~~i-ki~~~~~~--~---~~s~e~l~~~~~~A~~~g~~v~~H~e 200 (559)
T 2fty_A 130 GLHLILFQ-IEKPSVEARELLDVQLQAAYNDY--GVSSV-KMFMTYPG--L---QISDYDIMSAMYATRKNGFTTMLHAE 200 (559)
T ss_dssp EEEEECCC-CCSSHHHHHHHHHHHHHHHHHHH--CCCEE-EEESSSTT--T---BCCHHHHHHHHHHHHHHTCEEEEECC
T ss_pred Eeeeeecc-CcCCCchhhhhHHHHHHHHHHHC--CCCEE-EEEecCCC--C---cCCHHHHHHHHHHHHhCCCEEEEECC
Confidence 22210000 0000122 45 6777777432 23333 23333211 0 11235588889999999999999997
Q ss_pred Cc
Q psy4448 149 NA 150 (487)
Q Consensus 149 ~a 150 (487)
+.
T Consensus 201 ~~ 202 (559)
T 2fty_A 201 NG 202 (559)
T ss_dssp CH
T ss_pred Ch
Confidence 64
No 111
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=90.86 E-value=0.2 Score=47.23 Aligned_cols=38 Identities=13% Similarity=0.207 Sum_probs=29.6
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
|+++|.|||.... . .| ..++++++++|.+.|++.+.+.
T Consensus 1 m~~~DlH~Ht~~S-d----~g-----~~~~~e~v~~A~~~Gl~~iaiT 38 (245)
T 1m65_A 1 MYPVDLHMHTVAS-T----HA-----YSTLSDYIAQAKQKGIKLFAIT 38 (245)
T ss_dssp -CCEECCBCCTTS-T----TC-----CCCHHHHHHHHHHHTCCEEEEE
T ss_pred CCceEeCcCCCCC-C----CC-----CCcHHHHHHHHHHCCCCEEEEC
Confidence 8899999998753 1 12 3478999999999999987765
No 112
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=90.70 E-value=0.3 Score=47.01 Aligned_cols=51 Identities=16% Similarity=0.069 Sum_probs=39.3
Q ss_pred hhHHHHHHHHHHhhhCCCCEEEEeccc-hHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 248 ANIVYFRKQLDLSVTHKLPLFLHCRNA-KSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 248 ~Q~~~F~~ql~lA~~~~lPl~iH~r~a-~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
.|...|+.++++|+++|+||+||++.+ ..++.++++++. . ...+.|++++.
T Consensus 121 ~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~p--l-~~vi~H~g~~~ 172 (288)
T 2ffi_A 121 LTGAQWRPLLERIGEQGWHVELHRQVADIPVLVRALQPYG--L-DIVIDHFGRPD 172 (288)
T ss_dssp TTSTTTHHHHHHHHHHTCEEEECSCTTTHHHHHHHHTTTT--C-CEEESGGGSCC
T ss_pred cccHHHHHHHHHHHHCCCeEEEeechhhHHHHHHHHHHCC--C-CEEEECCCCCC
Confidence 355679999999999999999999988 478888888763 2 22334777764
No 113
>4f0l_A Amidohydrolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Brucella melitensis biovar abortus}
Probab=90.51 E-value=3.9 Score=41.71 Aligned_cols=60 Identities=12% Similarity=0.093 Sum_probs=40.8
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCchHHHHHHH-----------HHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIM-----------KEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iL-----------k~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.+++..++|+ ++||.+|.-....++-.++ .+.+...+...+.||..-+.+.++.+.+.
T Consensus 223 ~~~l~~~~~~a~--g~~v~~H~~e~~~~~~~~~~~~g~~~~~~l~~~g~l~~~~~~~H~~~~~~~~~~~l~~~ 293 (458)
T 4f0l_A 223 PDELDSVTQLLP--DAPVHIHVAEQVKEVEDCIAWSGKRPVEWLLDHQDVTARWCLIHATHMSDEETKHMAKA 293 (458)
T ss_dssp HHHHHHHTTSST--TSCEEEEESCSHHHHHHHHHHHSSCHHHHHHHHSCCCTTEEEEECCSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHhc--CCCEEEEeCCCHHHHHHHHHHhCCCHHHHHHHcCCCCCCeEEEEeccCCHHHHHHHHHc
Confidence 345777778888 9999999987655543333 33332222246779999998888887766
No 114
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=89.75 E-value=0.45 Score=46.71 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=36.9
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-CHHhHHHHHHHHhcC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-NVEDSISSLKLAQSD 65 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~~~~~~~~~~la~~~ 65 (487)
|+++|.|||.... - | ...+++++++|.+.|+..+.+.-- +...+....+.+++.
T Consensus 1 M~~~DLH~Ht~~S-D-----g-----~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~ 55 (292)
T 2yb1_A 1 MANIDLHFHSRTS-D-----G-----ALTPTEVIDRAAARAPALLALTDHDCTGGLAEAAAAAARR 55 (292)
T ss_dssp -CCEECCBCCTTT-T-----C-----SSCHHHHHHHHHTTCCSEEEECCBTCCTTHHHHHHHHHHT
T ss_pred CCccccccCCCcc-C-----C-----CCCHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHc
Confidence 8999999998753 1 3 678999999999999997665422 233444455555544
No 115
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=87.65 E-value=8.5 Score=38.36 Aligned_cols=25 Identities=16% Similarity=0.405 Sum_probs=21.7
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
.+.+++.+++|+++++||.+|+-..
T Consensus 180 ~~~l~~~~~~a~~~g~~v~~H~~~~ 204 (406)
T 1p1m_A 180 EEYLKRVFDTAKSLNAPVTIHLYET 204 (406)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEESCS
T ss_pred HHHHHHHHHHHHHCCCcEEEEcCCC
Confidence 3678899999999999999999743
No 116
>1o12_A N-acetylglucosamine-6-phosphate deacetylase; structural genomics, TM0814, JCSG, PSI, protein structure initiative; 2.50A {Thermotoga maritima} SCOP: b.92.1.5 c.1.9.10
Probab=87.44 E-value=3.4 Score=41.46 Aligned_cols=29 Identities=24% Similarity=0.250 Sum_probs=24.7
Q ss_pred HHHHhhhCCCCEEE-EeccchHHHHHHHHH
Q psy4448 256 QLDLSVTHKLPLFL-HCRNAKSDFIEIMKE 284 (487)
Q Consensus 256 ql~lA~~~~lPl~i-H~r~a~~~~l~il~~ 284 (487)
.+++|+++|+|+.+ |+..+.+++.+.++.
T Consensus 173 ~i~~A~~~g~~v~igH~~~~~~~i~~a~~~ 202 (376)
T 1o12_A 173 LLLRLVKRDIVLSAGHSIATFEEFMKFYKE 202 (376)
T ss_dssp GGGGGGGGTCEEEECSBCCCHHHHHHHHTT
T ss_pred HHHHHHHCCCEEEeecCccCHHHHHHHHHC
Confidence 57899999999999 998888888777765
No 117
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=87.40 E-value=0.71 Score=43.86 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=28.5
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
++|.|||..... -| ...+++++++|.+.|++.+.+.
T Consensus 1 ~~DlH~Ht~~S~-----DG-----~~~~ee~v~~A~~~Gl~~iaiT 36 (267)
T 2yxo_A 1 MVDSHVHTPLCG-----HA-----EGHPEAYLEEARAKGLKGVVFT 36 (267)
T ss_dssp CEEEEECCGGGS-----SC-----CSCHHHHHHHHHHTTCSEEEEE
T ss_pred CCccCcCcCCCC-----CC-----CCCHHHHHHHHHHcCCCEEEEc
Confidence 589999986421 13 6789999999999999987765
No 118
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=85.46 E-value=4.1 Score=40.61 Aligned_cols=35 Identities=6% Similarity=0.015 Sum_probs=29.0
Q ss_pred cHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 373 NIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 373 ~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+...++.+.+..+++++++.+..+.|.-++|++.
T Consensus 320 ~l~~~l~~~~~~~~~~~~~~l~~aT~~~A~~lgl~ 354 (396)
T 2vhl_A 320 KMNEGARHMREFTNCSWTDIANITSENAAKQLGIF 354 (396)
T ss_dssp CHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHHTCT
T ss_pred CHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCc
Confidence 56666666655569999999999999999999986
No 119
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=85.41 E-value=0.54 Score=46.05 Aligned_cols=129 Identities=12% Similarity=0.130 Sum_probs=89.8
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEeccch-HHHHHHHHHhCC-CC-------C------------------------CCc
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCRNAK-SDFIEIMKEYAP-KL-------P------------------------RKG 293 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~-~~~l~il~~~~~-~~-------~------------------------~~g 293 (487)
..|...|+.++++|+++|+|+.||++.+. .++.++++++.. ++ + ..+
T Consensus 118 ~~~~~~~~~~~~~~~~~glpv~ih~~~~~l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la~~~n 197 (303)
T 4do7_A 118 FVDDADFARGVAWLQANDYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELAALPH 197 (303)
T ss_dssp HHHCHHHHHHHHHHHHTTCEEEECCCGGGHHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHHTSTT
T ss_pred cccCHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHHhCCC
Confidence 36788999999999999999999999985 899999998731 00 0 135
Q ss_pred EEEEeeCCccccc-c----cccchh----hHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccC
Q psy4448 294 VIHSFDGTPFQAV-D----SLKTKE----NLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKM 364 (487)
Q Consensus 294 v~hsfsG~~~~~~-~----~~k~~~----~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~ 364 (487)
||+-.||...... . ...... ...++..++.||||..||.|++.+..
T Consensus 198 v~~klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~~~~~------------------------- 252 (303)
T 4do7_A 198 VVCKLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVCLLAA------------------------- 252 (303)
T ss_dssp EEEEECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGGGGTC-------------------------
T ss_pred EEEEeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCCcCcC-------------------------
Confidence 7777777421110 0 000000 12577888999999999999843211
Q ss_pred CCCCCccccHHHHHHHHHH-h-hCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 365 VKSRNEPANIVQILEIVAA-V-RGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 365 ~~~~n~P~~l~~v~~~iA~-i-kg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
....+++.+.+ + .+++.++...+++.|+.|||++..
T Consensus 253 --------~~~~~~~~~~~~~~~~l~~~~~~~i~~~Na~rl~~l~~ 290 (303)
T 4do7_A 253 --------SYDEVASLVERWAESRLSAAERSALWGGTAARCYALPE 290 (303)
T ss_dssp --------CHHHHHHHHHHHHHHHCCHHHHHHHTTHHHHHHTTCC-
T ss_pred --------CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCCC
Confidence 12344455555 3 478999999999999999999974
No 120
>2qpx_A Predicted metal-dependent hydrolase of the TIM-BA; YP_805737.1, putative metal-dependent hydrolase; HET: KCX MSE; 1.40A {Lactobacillus casei}
Probab=84.81 E-value=1.1 Score=45.67 Aligned_cols=121 Identities=17% Similarity=0.197 Sum_probs=78.7
Q ss_pred hhHHHHHHHHHhcC-CCEEEEEe-----eCCCCCCCC------------------CCChHHHHHHHHHHHHHhhhCCCCE
Q psy4448 88 GYLQSLDKIIKEGG-KKVVAFGE-----FGLDYDRVQ------------------YCPVETQLKYFRKQLDLSVTHKLPL 143 (487)
Q Consensus 88 ~~l~~L~~ll~~~~-~~vvaIGE-----IGLD~~~~~------------------~~~~e~Q~~vF~~qL~LA~el~lPV 143 (487)
++.+.+++.+.... ..++|++- .||++...+ ..+....-.+|..++++|.++|+||
T Consensus 146 ~~~~~~~~~l~~~~~~g~~gfksv~~~~~gl~~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~p~~l~~~~e~a~e~glpv 225 (376)
T 2qpx_A 146 AWWQAFSNDVKQAKAHGFVGFKSIAAYRVGLHLEPVNVIEAAAGFDTWKHSGEKRLTSKPLIDYMLYHVAPFIIAQDMPL 225 (376)
T ss_dssp HHHHHHHHHHHTTTTTTCCCEEECHHHHTCSCCCCCCHHHHHHHHHHHHHHCCCSCCCHHHHHHHHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHHHHHHHCCCceeccceEecCCCCCCCCCHHHHHHHHHHHHcCCCCCccchhHhHHHHHHHHHHHHHCCCeE
Confidence 34456666565422 25777777 688854211 0011122223667889999999999
Q ss_pred EEEecCch----------HHHHHHHH--HhCCCCCCcEEEEecCCCHHHHHHHHcC--c-----cc-------------h
Q psy4448 144 FLHCRNAK----------SDFIEIMK--EYAPKLPRKGVIHSFDGTPFQAVDSLKT--K-----EN-------------L 191 (487)
Q Consensus 144 iIH~r~a~----------~d~l~iLk--~~~~~~~~~~v~H~FsG~~~~a~~~l~~--~-----~g-------------~ 191 (487)
+||++.+. ..+.++++ +++. . .-++.|||.+..+ +..+++. + .+ .
T Consensus 226 ~iH~g~~d~~~~~~~~~p~~l~~ll~~~~~P~-l-kiVl~Hg~~~~~~-~~~l~~~~~nvy~d~s~~~~~~~~~~~~~l~ 302 (376)
T 2qpx_A 226 QFHVGYGDADTDMYLGNPLLMRDYLKAFTKKG-L-KVVLLHCYPYHRE-AGYLASVFPNLYFDISLLDNLGPSGASRVFN 302 (376)
T ss_dssp EEEESCCCTTSCGGGCCGGGGHHHHHHHGGGT-C-CEEEEECTTCHHH-HHHHHHHSTTEEEECTTHHHHSGGGHHHHHH
T ss_pred EEEeCCCCCCCCccccCHHHHHHHHhcCCCCC-C-cEEEECCCccHHH-HHHHHHhCCCEEEecccccccChhhHHHHHH
Confidence 99999631 56788888 7754 2 2478898887655 5555441 1 11 2
Q ss_pred hHhhhcCCCceeeccCCCCC
Q psy4448 192 ETVKSIPEDRLLLETDCPWC 211 (487)
Q Consensus 192 e~v~~iP~driLlETD~P~l 211 (487)
++++.+|.||||++||+||+
T Consensus 303 ~l~~~~g~dRiLfGSD~P~~ 322 (376)
T 2qpx_A 303 EAVELAPYTRILFASDASTY 322 (376)
T ss_dssp HHTSSSCGGGEECCCCCCBS
T ss_pred HHHHhcCCCCEEEECCCCcc
Confidence 56778899999999999997
No 121
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=83.94 E-value=0.54 Score=45.82 Aligned_cols=37 Identities=3% Similarity=0.147 Sum_probs=31.9
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEeccc---------hHHHHHHHHHh
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCRNA---------KSDFIEIMKEY 285 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r~a---------~~~~l~il~~~ 285 (487)
|...|..++++|+++++||+||++.+ -.++.++++++
T Consensus 136 ~d~~~~~~~~~a~e~glpv~iH~~~~~~~~~~~~~p~~~~~v~~~~ 181 (291)
T 3irs_A 136 DDRRLYPLYAFCEDNGIPVIMMTGGNAGPDITYTNPEHIDRVLGDF 181 (291)
T ss_dssp TCGGGHHHHHHHHHTTCCEEEECSSSCSSSGGGGCHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHcCCeEEEeCCCCCCCCCccCCHHHHHHHHHHC
Confidence 34579999999999999999999986 36788899886
No 122
>1rk6_A D-aminoacylase; TIM barrel, beta barrel, insertion, hydrolase; 1.43A {Alcaligenes faecalis} SCOP: b.92.1.6 b.92.1.6 c.1.9.11 PDB: 1rjp_A 1v51_A 1rjq_A 1rjr_A 1rk5_A 1v4y_A 1m7j_A
Probab=82.12 E-value=0.62 Score=48.66 Aligned_cols=44 Identities=20% Similarity=0.077 Sum_probs=29.9
Q ss_pred HHHHHHHHhhhCCCCEEEEecCc-------hHHHHHHHHHhCCCCCCcEEE-EecC
Q psy4448 128 YFRKQLDLSVTHKLPLFLHCRNA-------KSDFIEIMKEYAPKLPRKGVI-HSFD 175 (487)
Q Consensus 128 vF~~qL~LA~el~lPViIH~r~a-------~~d~l~iLk~~~~~~~~~~v~-H~Fs 175 (487)
.+.+.++.|.+++++|.+|++.. .++++++.++++. +..+ |...
T Consensus 215 el~~~~~~a~~~g~~v~~H~~~~~~~~~~~l~~~~~~a~~~g~----~v~i~H~~~ 266 (496)
T 1rk6_A 215 EIIEVCRPLITHGGVYATHMRDEGEHIVQALEETFRIGRELDV----PVVISHHKV 266 (496)
T ss_dssp HHHHHHTHHHHHTCEEEEECSCSSTTHHHHHHHHHHHHHHHTS----CEEECSCCC
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCcccHHHHHHHHHHHHHHcCC----eEEEEEEec
Confidence 44456667778899999999853 4566777777754 4444 7744
No 123
>3mpg_A Dihydroorotase, dhoase; hydrolase; 2.60A {Bacillus anthracis}
Probab=81.36 E-value=6.7 Score=39.67 Aligned_cols=35 Identities=9% Similarity=0.002 Sum_probs=28.9
Q ss_pred cHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 373 NIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 373 ~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+..+++.+....+++++++.+.++.|..++|++.
T Consensus 330 ~~~~~~~~~~~~~~~~~~~~~~~~t~~~a~~~g~~ 364 (428)
T 3mpg_A 330 AFPLLYTNLVKKGIITLEQLIQFLTEKPADTFGLE 364 (428)
T ss_dssp HHHHHHHHTTTTTSSCHHHHHHTTTHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHhHHHHHHhCCC
Confidence 56666666555567999999999999999999985
No 124
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=81.20 E-value=0.4 Score=46.82 Aligned_cols=115 Identities=21% Similarity=0.295 Sum_probs=82.3
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEeccchHH------------------------------HHHHHHHhCCCCC------
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCRNAKSD------------------------------FIEIMKEYAPKLP------ 290 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~------------------------------~l~il~~~~~~~~------ 290 (487)
..|...|..++++|+++++||+||++.+..+ +-++++++. +..
T Consensus 141 ~~~~~~~~~~~~~a~~~~lpv~iH~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~~~P-~l~~v~~H~ 219 (327)
T 2dvt_A 141 YYDLPQYRPFWGEVEKLDVPFYLHPRNPLPQDSRIYDGHPWLLGPTWAFAQETAVHALRLMASGLFDEHP-RLNIILGHM 219 (327)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEEECCCCCGGGCGGGTTCGGGSGGGTHHHHHHHHHHHHHHHTTHHHHCT-TCCEEESGG
T ss_pred CCCCcchHHHHHHHHHcCCeEEECCCCCCcchhhhhccchhhhcccccccHHHHHHHHHHHHcCcHhhCC-CCeEEEecc
Confidence 3456789999999999999999999876532 125666652 111
Q ss_pred ----------------------------------CCcEEEEeeCCcccccccccchhhHHHhhhCCCCceEeccCCCCCC
Q psy4448 291 ----------------------------------RKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLLETDCPWCE 336 (487)
Q Consensus 291 ----------------------------------~~gv~hsfsG~~~~~~~~~k~~~~~e~v~~iPldrlLlETD~P~~~ 336 (487)
..++|++++|. +......++++.+|.||||+|||.||+.
T Consensus 220 gg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~y~~~sg~-------~~~~~~~~~~~~~g~dril~gSD~P~~~ 292 (327)
T 2dvt_A 220 GEGLPYMMWRIDHRNAWVKLPPRYPAKRRFMDYFNENFHITTSGN-------FRTQTLIDAILEIGADRILFSTDWPFEN 292 (327)
T ss_dssp GTTHHHHHHHHHHTTTTCCSCCSSSCSSCHHHHHHHHEEEECTTC-------CCHHHHHHHHTTTCGGGEECCCCTTTSC
T ss_pred cccHHHHHHHHHhhhhhccccccCCCCCCHHHHHhhcEEEeccCC-------CCHHHHHHHHHHhCcccEEEecCCCCcc
Confidence 02344444442 1112234789999999999999999831
Q ss_pred CCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 337 VKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 337 ~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
...+++.++++ +++.+++.+++++|+.|||++.
T Consensus 293 -------------------------------------~~~~~~~~~~~-~l~~~~~~~i~~~Na~rl~~l~ 325 (327)
T 2dvt_A 293 -------------------------------------IDHASDWFNAT-SIAEADRVKIGRTNARRLFKLD 325 (327)
T ss_dssp -------------------------------------HHHHHHHHHHS-SSCHHHHHHHHTHHHHHHTTCC
T ss_pred -------------------------------------HHHHHHHHHHC-CCCHHHHHHHHHHhHHHHhCCC
Confidence 12455667776 9999999999999999999874
No 125
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=81.04 E-value=6.5 Score=38.99 Aligned_cols=36 Identities=6% Similarity=0.024 Sum_probs=29.0
Q ss_pred ccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 372 ANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 372 ~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.++...++.+....+++++++.+..+.|.-+++++.
T Consensus 311 ~~~~~~~~~~~~~~g~~~~~al~~aT~~~A~~lg~~ 346 (382)
T 1yrr_A 311 LTMIEGVRNLVEHCGIALDEVLRMATLYPARAIGVE 346 (382)
T ss_dssp CCHHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred cCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhCCC
Confidence 355666666655579999999999999999999986
No 126
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=78.37 E-value=17 Score=36.27 Aligned_cols=135 Identities=13% Similarity=0.140 Sum_probs=75.3
Q ss_pred HHHHHHHHhhhCCCCEE-EEe---------ccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccc----cccccc-hhhH-
Q psy4448 252 YFRKQLDLSVTHKLPLF-LHC---------RNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA----VDSLKT-KENL- 315 (487)
Q Consensus 252 ~F~~ql~lA~~~~lPl~-iH~---------r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~----~~~~k~-~~~~- 315 (487)
-|..-+++++ .||+ -|+ |+-.++.++.|.+. |=+++++...... ..++.. .+..
T Consensus 164 ~~~dvl~~s~---~Pvi~SHsn~~al~~h~RNl~De~irala~~-------GGvigv~~~~~fl~~~~~~t~~~~~~hi~ 233 (325)
T 2i5g_A 164 TSEEVILESK---KPVCYSHCLPSGLKEHPRNKSDEELKFIADH-------GGFVGVTMFAPFLKKGIDSTIDDYAEAIE 233 (325)
T ss_dssp HHHHHHHHCS---SCCEEEEECBTTTCCCTTSBCHHHHHHHHHT-------TCEEEECCCGGGSSSGGGCBHHHHHHHHH
T ss_pred HHHHHHHHhC---CCEEEeCCCccccCCCCCCCCHHHHHHHHHc-------CCeEEEeecchhcCCCCCCCHHHHHHHHH
Confidence 3444555554 8976 475 57789999999885 2355555421110 011100 0112
Q ss_pred HHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCcc------CCCCCCccccHHHHHHHHHHhhCCCH
Q psy4448 316 ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDK------MVKSRNEPANIVQILEIVAAVRGVER 389 (487)
Q Consensus 316 e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~------~~~~~n~P~~l~~v~~~iA~ikg~~~ 389 (487)
-+++.+..|++.+=||-|+..+.. -+.|....- ..|.+.. ...+-..+..++.+++.+.+ +|.+.
T Consensus 234 ~i~~~~G~dhVgiGsDf~~~~~~~---~~~~~~~~d-----g~~~~~~~~G~~~~~~gl~~~~~~~~l~~~L~~-~G~se 304 (325)
T 2i5g_A 234 YVMNIVGEDAIGIGTDFTQGHGHD---FFEWLTHDK-----GYARRLTNFGKIVNPLGIRTVGEFPNLTETLLK-RGMPE 304 (325)
T ss_dssp HHHHHHCTTSEEECCCBCTTCCHH---HHHHHHBGG-----GTSSBCCCCCSCCCCBTCSSGGGTHHHHHHHHH-TTCCH
T ss_pred HHHHhcCCceEEECCcCccccccc---chhhhcccc-----cccccccccCCCCCcccCCCHHHHHHHHHHHHH-cCCCH
Confidence 357788999999999998532210 011111000 0000000 00122345666666666643 68999
Q ss_pred HHHHHHHHHHHHHhcC
Q psy4448 390 EKLGPIIHQNTLRLFF 405 (487)
Q Consensus 390 ~~va~~~~~N~~rlf~ 405 (487)
+++..++..|+.|+|+
T Consensus 305 ~~i~ki~g~N~lRvl~ 320 (325)
T 2i5g_A 305 RVVRKVMGENWVRVLR 320 (325)
T ss_dssp HHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999984
No 127
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=78.20 E-value=5.3 Score=40.14 Aligned_cols=76 Identities=11% Similarity=0.047 Sum_probs=49.6
Q ss_pred cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc--hHHHHHHHHHhCCCCCCcEEEEecCCC
Q psy4448 100 GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA--KSDFIEIMKEYAPKLPRKGVIHSFDGT 177 (487)
Q Consensus 100 ~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a--~~d~l~iLk~~~~~~~~~~v~H~FsG~ 177 (487)
.++.++|||=.|=... .++ .-|...++.|++.|+|+.+|+-.. .+.+.+.+...+. ..|=|+..-.
T Consensus 161 ~~~~vvG~dL~g~E~~---~~~-----~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~----~rIgHgv~l~ 228 (343)
T 3rys_A 161 MHAPIAGIGLDSAEVG---NPP-----SKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHV----ERIDHGIRCM 228 (343)
T ss_dssp TTCCCCEEEEESCCTT---CCG-----GGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCC----SEEEECGGGG
T ss_pred CCCCEEEEecCCcccC---CCH-----HHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCc----ceeeeeeeec
Confidence 3457889888885432 222 246777889999999999999764 3455555543433 4588997754
Q ss_pred --HHHHHHHHcC
Q psy4448 178 --PFQAVDSLKT 187 (487)
Q Consensus 178 --~~~a~~~l~~ 187 (487)
++.++.+.+.
T Consensus 229 ~d~~l~~~l~~~ 240 (343)
T 3rys_A 229 EDTDVVQRLVAE 240 (343)
T ss_dssp GCHHHHHHHHHH
T ss_pred CChHHHHHHHhc
Confidence 4566555544
No 128
>4gy7_A Urease; JACK bean, hydrolase, ME binding, nickel; HET: CME KCX; 1.49A {Canavalia ensiformis} PDB: 3la4_A* 4h9m_A*
Probab=77.87 E-value=10 Score=42.80 Aligned_cols=107 Identities=15% Similarity=0.185 Sum_probs=58.6
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHH-------------hHHHHHHHHhcCCCeE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVE-------------DSISSLKLAQSDERLY 69 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~-------------~~~~~~~la~~~~~v~ 69 (487)
+||+|+|+..+.. ...+...|++.++..++.+. ...........++.-+
T Consensus 403 fID~HvHl~~P~~------------------~~eALasGVTTvv~gGtgp~~~~~~~~~~~~~~~~~~~l~a~~~~~vn~ 464 (840)
T 4gy7_A 403 AIDCHVHYICPQL------------------VYEAISSGITTLVGGGTGPAAGTRATTCTPSPTQMRLMLQSTDDLPLNF 464 (840)
T ss_dssp EEEEEEECCCTHH------------------HHHHHHHTEEEEEEECSSSCHHHHHSSCCCSHHHHHHHHHHTTTSSSEE
T ss_pred eeeeccCCCCCCc------------------hHHHHHhhHHHHHhCCCceecCcccccccchHHHHHHHHhhhhcceeEE
Confidence 8999999876422 23445679988887765432 1122222223333222
Q ss_pred EEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 70 STVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 70 ~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
...+-.+... .+.+.++... .+.++ .++.++.. + ...+...++.|.+++.++.+|+..
T Consensus 465 g~~~~~~~~~----------~~~L~el~~a---Ga~g~-K~~~~~~~----t----~~~i~~aL~~A~e~g~~V~ih~e~ 522 (840)
T 4gy7_A 465 GFTGKGSSSK----------PDELHEIIKA---GAMGL-KLHEDWGS----T----PAAIDNCLTIAEHHDIQINIHTDT 522 (840)
T ss_dssp EEEEECCCSS----------SHHHHHHHHH---TCSEE-EEETTTCC----C----HHHHHHHHHHHHHHTCEEEEECCT
T ss_pred EEeCCCCccc----------HHHHHHhhhc---eeeEE-EeccccCC----C----HHHHHHHHHHHHHhCCEEEEeccC
Confidence 2223222111 1344555544 24444 23444422 1 245677889999999999999865
No 129
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=77.85 E-value=3.5 Score=40.81 Aligned_cols=53 Identities=9% Similarity=0.045 Sum_probs=37.0
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-CHHhHHHHHHHHhcC
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-NVEDSISSLKLAQSD 65 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~~~~~~~~~~la~~~ 65 (487)
|.+|.|||..... | ...+++++++|.+.|+..+.+.-- +...+..+.+.+++.
T Consensus 13 ~~~DLH~Hs~~SD------G-----~~~~~elv~~A~~~Gl~~iaiTDH~~~~g~~~~~~~~~~~ 66 (301)
T 3o0f_A 13 QGWDIHCHTVFSD------G-----TETPRTLVEQARKLGLHGVAIADHDTTAGWDEATEASEEI 66 (301)
T ss_dssp SSEEEEECCTTTT------C-----SSCHHHHHHHHHHTTCSEEEECCBTCCTTHHHHHHHHHHH
T ss_pred ceEEeeECCCCCC------C-----CCCHHHHHHHHHHcCCCEEEEcCCCccccHHHHHHHHHhc
Confidence 5799999987431 3 578999999999999987665422 344455555555543
No 130
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=77.65 E-value=26 Score=34.49 Aligned_cols=30 Identities=0% Similarity=-0.078 Sum_probs=24.8
Q ss_pred HHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 378 LEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 378 ~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
+..+....+++.+++.+.++.|..++|++.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~t~npA~~~gl~ 343 (390)
T 1onw_A 314 VQVLVKDYDFSISDALRPLTSSVAGFLNLT 343 (390)
T ss_dssp HHHHHHHHCCCHHHHHGGGTHHHHHHTTCT
T ss_pred HHHHHHHcCCCHHHHHHHHhHHHHHHhCCC
Confidence 334445578999999999999999999985
No 131
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=77.26 E-value=2.2 Score=40.56 Aligned_cols=36 Identities=11% Similarity=0.127 Sum_probs=29.3
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
+++|.|||.... - | ..++++++++|.+.|++.+.+.
T Consensus 20 ~~~DlH~Ht~~S-D-----g-----~~t~ee~v~~A~~~Gl~~i~iT 55 (255)
T 2anu_A 20 LLCDFHVHTNMS-D-----G-----HLPLGEVVDLFGKHGVDVVSIT 55 (255)
T ss_dssp EEEEEEECCTTT-T-----C-----SSCHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEEeecCCCc-C-----C-----CCCHHHHHHHHHHCCCCEEEEc
Confidence 479999999753 1 3 6789999999999999977665
No 132
>3e38_A Two-domain protein containing predicted PHP-like dependent phosphoesterase; structural genomics; 2.20A {Bacteroides vulgatus atcc 8482}
Probab=77.16 E-value=1.8 Score=43.69 Aligned_cols=37 Identities=16% Similarity=0.030 Sum_probs=29.6
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
|+++|.|||..... | ...+++++++|++.|++.+.+.
T Consensus 18 ~~~~DlH~Ht~~SD------g-----~~~~~elv~~A~~~Gl~~iaiT 54 (343)
T 3e38_A 18 TLKCDFHMHSVFSD------G-----LVWPTVRVDEAYRDGLDAISLT 54 (343)
T ss_dssp EEEEECCBCCTTTT------C-----SBCHHHHHHHHHHTTCSEECCE
T ss_pred EEEEECCCCCCCCC------C-----CCCHHHHHHHHHHcCCCEEEEC
Confidence 67899999986431 3 5689999999999999976554
No 133
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=76.40 E-value=0.85 Score=46.12 Aligned_cols=22 Identities=32% Similarity=0.472 Sum_probs=19.1
Q ss_pred hHhhhcCCCceeeccCCCCCCC
Q psy4448 192 ETVKSIPEDRLLLETDCPWCEV 213 (487)
Q Consensus 192 e~v~~iP~driLlETD~P~l~~ 213 (487)
.+++.++.||||+|||+||+.+
T Consensus 301 ~~~~~~g~drilfgSD~P~~~~ 322 (357)
T 3nur_A 301 LVKKEVGIDRILYAADYPYIEP 322 (357)
T ss_dssp HHHHHHCGGGBCBCCCTTTCCC
T ss_pred HHHHHcCCceEEEeCCCCCCCc
Confidence 4577899999999999999863
No 134
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=76.38 E-value=40 Score=32.90 Aligned_cols=135 Identities=17% Similarity=0.209 Sum_probs=77.8
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. ++ ++..+|- .. ..+.++.. +.+.
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~--~~-------t~~ai~la-~~A~ 104 (301)
T 1xky_A 35 TTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGS--NN-------THASIDLT-KKAT 104 (301)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--SC-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCC--CC-------HHHHHHHH-HHHH
Confidence 445777778899999998886 466666776654332 33 4544442 11 22334333 3343
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+ -.+.|| =+--.||. . ..|..+++..-++|...++||+|...- -..+++.-|.+.+. -+-+-
T Consensus 105 ~--~Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----IvgiK 172 (301)
T 1xky_A 105 E--VGVDAV-MLVAPYYN-K----PSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRLSEIEN----IVAIK 172 (301)
T ss_dssp H--TTCSEE-EEECCCSS-C----CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHTSTT----EEEEE
T ss_pred h--cCCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCC----EEEEE
Confidence 3 133344 23345554 1 247888888889999999999998742 12344444434322 12234
Q ss_pred ecCCCHHHHHHHHc
Q psy4448 173 SFDGTPFQAVDSLK 186 (487)
Q Consensus 173 ~FsG~~~~a~~~l~ 186 (487)
--+|+.....++++
T Consensus 173 dssgd~~~~~~~~~ 186 (301)
T 1xky_A 173 DAGGDVLTMTEIIE 186 (301)
T ss_dssp ECSSCHHHHHHHHH
T ss_pred cCCCCHHHHHHHHH
Confidence 45678777666654
No 135
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=76.00 E-value=29 Score=32.46 Aligned_cols=136 Identities=12% Similarity=0.047 Sum_probs=70.8
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCC--CCCCC--c---CCCchhhHHHHHHHHH-
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHP--TRCSE--F---ENDPEGYLQSLDKIIK- 98 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP--~~~~~--~---~~~~~~~l~~L~~ll~- 98 (487)
..++++.++.+.+.|++.+=+......+.+.+.++.++++--..+++.-. |.... . ....+..++.+++.+.
T Consensus 22 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~ 101 (269)
T 3ngf_A 22 EVPFLERFRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHY 101 (269)
T ss_dssp TSCHHHHHHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHH
Confidence 46899999999999998764433333455666666666654333333211 11100 0 0001222333443332
Q ss_pred --hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEec----------CchHHHHHHHHHhCC
Q psy4448 99 --EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR----------NAKSDFIEIMKEYAP 163 (487)
Q Consensus 99 --~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r----------~a~~d~l~iLk~~~~ 163 (487)
.-..+.+.+ -.|.+........++.-.+.|++..++|+++|..+.||.. ...+++.+++++.+.
T Consensus 102 A~~lGa~~v~~-~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~n~~~~~~~~~~~~~~~~~l~~~v~~ 177 (269)
T 3ngf_A 102 ALALDCRTLHA-MSGITEGLDRKACEETFIENFRYAADKLAPHGITVLVEPLNTRNMPGYFIVHQLEAVGLVKRVNR 177 (269)
T ss_dssp HHHTTCCEEEC-CBCBCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCCHHHHHHHHHHHCC
T ss_pred HHHcCCCEEEE-ccCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeeCCcccCccchhcCHHHHHHHHHHhCC
Confidence 211223332 2341110000011344566777888888999999999852 235677888887753
No 136
>3icj_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structur initiative; HET: KCX; 1.95A {Pyrococcus furiosus} PDB: 3etk_A* 3igh_X*
Probab=74.94 E-value=59 Score=34.31 Aligned_cols=138 Identities=10% Similarity=0.071 Sum_probs=83.8
Q ss_pred HHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcC--C-CeEEEeecCCCCCCCcCCCchhhHHHHHHHHH--hcCCCEEEE
Q psy4448 33 VLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSD--E-RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIK--EGGKKVVAF 107 (487)
Q Consensus 33 vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~--~-~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~--~~~~~vvaI 107 (487)
.++.+...||+.+...+.+...++...++.++- + +++.. +.| +.++.+.+.-. ...+. +-+
T Consensus 227 a~~~~~~~GiTsv~d~~~~~~~~~~~~~l~~~g~l~~rv~~~--~~~-----------~~~~~~~~~~~~~~~~~~-~~~ 292 (534)
T 3icj_A 227 AQEHLLSLGVHSVGFMSVGEKALKALFELEREGRLKMNVFAY--LSP-----------ELLDKLEELNLGKFEGRR-LRI 292 (534)
T ss_dssp HHHHHHHTTEEEEEEEEECHHHHHHHHHHHHTTCCCSEEEEE--ECG-----------GGHHHHHHHTCCSEECSS-EEE
T ss_pred HHHHHHhCCCEEEEeCCCCHHHHHHHHHHHhCCCCcEEEEEe--cCH-----------HHHHHHHHhccccCCCCc-EEE
Confidence 345566789999998888888888877777653 2 23332 222 11233333210 01112 223
Q ss_pred Eee--CCCCCC------C--CC-------CChHHHHHHHHHHHHHhhhCCCCEEEEecC--chHHHHHHHHHhCCCCCCc
Q psy4448 108 GEF--GLDYDR------V--QY-------CPVETQLKYFRKQLDLSVTHKLPLFLHCRN--AKSDFIEIMKEYAPKLPRK 168 (487)
Q Consensus 108 GEI--GLD~~~------~--~~-------~~~e~Q~~vF~~qL~LA~el~lPViIH~r~--a~~d~l~iLk~~~~~~~~~ 168 (487)
|-+ -.|... . .| .....-.+.+++.++.|.+.|++|.+|+-. +.+.+++.+.+... ..
T Consensus 293 ~gvK~~~DG~~~~~tA~l~~pY~d~~~~~g~~~~~~e~l~~~v~~A~~~G~~v~~Ha~gd~ai~~~l~a~~~~~~---r~ 369 (534)
T 3icj_A 293 WGVKLFVDGSLGARTALLSEPYTDNPTTSGELVMNKDEIVEVIERAKPLGLDVAVHAIGDKAVDVALDAFEEAEF---SG 369 (534)
T ss_dssp EEEEEESCCCTTTTCSCCSSCBTTBTTCCCCCSSCHHHHHHHHHHHTTTTCEEEEEECSHHHHHHHHHHHHHHTC---CC
T ss_pred EeEEEEEeCCCCccchhhcCCccCCCCCCCcccCCHHHHHHHHHHHHHCCCEEEEEEcChHHHHHHHHHHHhccC---CC
Confidence 322 222110 0 00 001123566899999999999999999975 45567777776652 35
Q ss_pred EEEEecCCCHHHHHHHHcC
Q psy4448 169 GVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 169 ~v~H~FsG~~~~a~~~l~~ 187 (487)
.+.||..-+.+.++++.++
T Consensus 370 ~ieH~~~~~~e~i~~la~~ 388 (534)
T 3icj_A 370 RIEHASLVRDDQLERIKEL 388 (534)
T ss_dssp EEEECCBCCHHHHHHHHHH
T ss_pred EEEECCCCCHHHHHHHHHc
Confidence 8999999999999998887
No 137
>1onw_A Isoaspartyl dipeptidase; amidohydrolase, hydrolase, metalloprotease; HET: KCX; 1.65A {Escherichia coli} SCOP: b.92.1.7 c.1.9.13 PDB: 1onx_A* 1po9_A* 1poj_A* 1pok_B* 2aqo_A* 1ybq_A* 2aqv_A*
Probab=73.06 E-value=3.4 Score=41.16 Aligned_cols=18 Identities=33% Similarity=0.523 Sum_probs=14.5
Q ss_pred HHhhh-CCCCceEeccCCC
Q psy4448 316 ETVKS-IPEDRLLLETDCP 333 (487)
Q Consensus 316 e~v~~-iPldrlLlETD~P 333 (487)
++++. +|+||+++.||+.
T Consensus 269 ~~~~~g~~~d~i~l~TD~~ 287 (390)
T 1onw_A 269 RAVQAGIPLARVTLSSDGN 287 (390)
T ss_dssp HHHHTTCCGGGEEEECCBT
T ss_pred HHHHcCCCccceEEEccCC
Confidence 45554 7899999999984
No 138
>2f6k_A Metal-dependent hydrolase; metal dependent hydrolyse, aminohydro_2, ACMDS, ACMS, trypto metabolism, quinolinic acid, QUIN; 2.50A {Lactobacillus plantarum} SCOP: c.1.9.15
Probab=72.33 E-value=1.4 Score=42.54 Aligned_cols=26 Identities=8% Similarity=-0.018 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchH
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKS 276 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~ 276 (487)
..|+.++++|+++++||+||++.+..
T Consensus 135 ~~~~~~~~~a~~~~lpv~iH~~~~~~ 160 (307)
T 2f6k_A 135 PVLERVYQELDARQAIVALHPNEPAI 160 (307)
T ss_dssp GGGHHHHHHHHTTTCEEEEECCCCSC
T ss_pred HhHHHHHHHHHHcCCeEEECCCCCcc
Confidence 57999999999999999999998764
No 139
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=72.13 E-value=1.3 Score=45.17 Aligned_cols=21 Identities=24% Similarity=0.371 Sum_probs=18.9
Q ss_pred hHhhhcCCCceeeccCCCCCC
Q psy4448 192 ETVKSIPEDRLLLETDCPWCE 212 (487)
Q Consensus 192 e~v~~iP~driLlETD~P~l~ 212 (487)
++++.++.||||+|||+||..
T Consensus 321 ~~~~~~g~drilfgSD~P~~~ 341 (373)
T 4inf_A 321 FCQQVMGEDRVMYAMDYPYQY 341 (373)
T ss_dssp HHHHHHCGGGEECCCCTTTTC
T ss_pred HHHHHcCcceEEEecCCCCCc
Confidence 567889999999999999985
No 140
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=72.01 E-value=55 Score=31.67 Aligned_cols=137 Identities=7% Similarity=0.015 Sum_probs=77.4
Q ss_pred HHHHHHHHHh-cCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHh
Q psy4448 30 IDHVLNRAWN-AGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKE 99 (487)
Q Consensus 30 ~~~vl~ra~~-~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~ 99 (487)
+..+++...+ .||..+++.|+ +.++..++++.+.+. +++-.-+|+=-.. ..+.++..+. +.+
T Consensus 26 l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~-------t~~ai~la~~-a~~ 97 (293)
T 1f6k_A 26 LRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVN-------LKEAVELGKY-ATE 97 (293)
T ss_dssp HHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC-------HHHHHHHHHH-HHH
T ss_pred HHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCC-------HHHHHHHHHH-HHh
Confidence 4467777778 99999998876 466676776664432 3443444542211 2233433333 333
Q ss_pred cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEe
Q psy4448 100 GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 100 ~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~ 173 (487)
- .+.|| =+--.||. . . .|..+++..-++|...++||+|+..- -.-+++.-|.+.+. .-+|=.
T Consensus 98 ~--Gadav-lv~~P~y~-~-~---~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---IvgiK~- 165 (293)
T 1f6k_A 98 L--GYDCL-SAVTPFYY-K-F---SFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGELYKNPK---VLGVKF- 165 (293)
T ss_dssp H--TCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHHHTSTT---EEEEEE-
T ss_pred c--CCCEE-EECCCCCC-C-C---CHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHHhcCCC---EEEEEE-
Confidence 1 23333 13345554 1 2 37888888888888889999998732 22344444434422 123333
Q ss_pred cCCCHHHHHHHHc
Q psy4448 174 FDGTPFQAVDSLK 186 (487)
Q Consensus 174 FsG~~~~a~~~l~ 186 (487)
-+|+.....++++
T Consensus 166 s~gd~~~~~~~~~ 178 (293)
T 1f6k_A 166 TAGDFYLLERLKK 178 (293)
T ss_dssp CSCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 4688877766654
No 141
>2qee_A BH0493 protein; amidohydrolase, structural genomics, PSI-2, protein structure initiative; 1.65A {Bacillus halodurans c-125} PDB: 3hka_A* 2q6e_A 3hk5_A* 3hk7_A* 3hk8_A* 3hk9_A* 2q08_A* 2pnk_A*
Probab=71.91 E-value=2.5 Score=43.91 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=25.3
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHH------HHH-HHhcCCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHV------LNR-AWNAGLE 43 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~v------l~r-a~~~GV~ 43 (487)
|.+||-||||+...+. +....++.++ .+| ++.+||.
T Consensus 22 ~PIiDyH~HL~P~~ia-------e~~f~ni~elwgdHYkw~r~mRa~Gv~ 64 (437)
T 2qee_A 22 QPVTDMHTHLFSPNFG-------EILLWDIDELLTYHYLVAEVMRWTDVS 64 (437)
T ss_dssp SCEEECSCSCCCGGGC-------TTSBCSHHHHHTSHHHHHHHHTTCCSC
T ss_pred CCeeccccCCCHHHHH-------hcccCCHHhccccHHHHHHHHHHcCCC
Confidence 7899999999998762 1113677776 325 7888875
No 142
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=71.59 E-value=1.3 Score=43.49 Aligned_cols=27 Identities=11% Similarity=0.170 Sum_probs=23.6
Q ss_pred HHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 381 VAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 381 iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
++++.+++.++..++++.|+.|||++.
T Consensus 305 l~~~~~l~~~~~~~i~~~NA~rl~~l~ 331 (336)
T 2wm1_A 305 IESMEEFDEETKNKLKAGNALAFLGLE 331 (336)
T ss_dssp HHTCTTSCHHHHHHHHTHHHHHHHTCC
T ss_pred HHhccCCCHHHHHHHHHHHHHHHhCcC
Confidence 455678899999999999999999985
No 143
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=71.37 E-value=1.1 Score=44.48 Aligned_cols=30 Identities=13% Similarity=0.231 Sum_probs=24.4
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEeccchH
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCRNAKS 276 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~ 276 (487)
+.|...|..++++|.++++||+||++.+..
T Consensus 155 ~l~d~~~~p~~~~a~e~~lpv~iH~~~~~~ 184 (350)
T 2gwg_A 155 PLTDRIWYPIYEKMVELEIPAMIHVSTSCN 184 (350)
T ss_dssp CTTSGGGHHHHHHHHHHTCCEEECCCC---
T ss_pred CCCCHHHHHHHHHHHHcCCeEEECCCCCCc
Confidence 356678999999999999999999998764
No 144
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=70.76 E-value=7.1 Score=37.56 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=27.3
Q ss_pred ccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCCC
Q psy4448 370 EPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPHEL 409 (487)
Q Consensus 370 ~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~~ 409 (487)
.+..+..+++.+.+..|.. .++..+.|..++++-...
T Consensus 201 r~~~~~~a~~~l~~~~G~~---~a~~~~~n~~~il~~~~~ 237 (262)
T 3qy7_A 201 RNFHTQEALYVLEKEFGSE---LPYMLTENAELLLRNQTI 237 (262)
T ss_dssp SCCCHHHHHHHHHHHHCSH---HHHHHHHHHHHHHTTCCC
T ss_pred CCchHHHHHHHHHHHhCHH---HHHHHHHHHHHHHCCCCc
Confidence 4557888888888878854 445589999999875543
No 145
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=70.42 E-value=71 Score=30.81 Aligned_cols=138 Identities=15% Similarity=0.134 Sum_probs=78.0
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++..+. +.+-
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~-------t~~ai~la~~-a~~~ 95 (291)
T 3tak_A 24 LEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANS-------TREAIELTKA-AKDL 95 (291)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSS-------HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC-------HHHHHHHHHH-HHhc
Confidence 345677777899999998887 456666666654332 3333333432211 2233443333 3331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEec
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHSF 174 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~F 174 (487)
.+.|| =+-..||. . . .|..+++..-++|...++||+|+..- -.-+++.-|.+.+. -.-+---
T Consensus 96 --Gadav-lv~~P~y~-~-~---~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----ivgiK~s 163 (291)
T 3tak_A 96 --GADAA-LLVTPYYN-K-P---TQEGLYQHYKAIAEAVELPLILYNVPGRTGVDLSNDTAVRLAEIPN----IVGIKDA 163 (291)
T ss_dssp --TCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHTTSTT----EEEEEEC
T ss_pred --CCCEE-EEcCCCCC-C-C---CHHHHHHHHHHHHHhcCCCEEEEecccccCCCCCHHHHHHHHcCCC----EEEEEeC
Confidence 23344 23455654 1 2 37888888888999899999998742 12244444433321 1223445
Q ss_pred CCCHHHHHHHHcC
Q psy4448 175 DGTPFQAVDSLKT 187 (487)
Q Consensus 175 sG~~~~a~~~l~~ 187 (487)
+|+.....++++.
T Consensus 164 sgd~~~~~~~~~~ 176 (291)
T 3tak_A 164 TGDVPRGKALIDA 176 (291)
T ss_dssp SCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 6888877776653
No 146
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=69.65 E-value=73 Score=31.23 Aligned_cols=136 Identities=15% Similarity=0.175 Sum_probs=78.3
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-. . ..+.++..+ .+.
T Consensus 46 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~--s-------t~eai~la~-~A~ 115 (314)
T 3qze_A 46 LAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGAN--S-------TREAVALTE-AAK 115 (314)
T ss_dssp HHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCS--S-------HHHHHHHHH-HHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc--C-------HHHHHHHHH-HHH
Confidence 345667777899999999876 456666666654332 33 44444421 1 233344333 343
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+ -.+.|| =+--.||. . . .|..+++..-++|...++||+|...- -.-+++.-|.+.+. -+-+-
T Consensus 116 ~--~Gadav-lv~~P~y~-~-~---s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----IvgiK 183 (314)
T 3qze_A 116 S--GGADAC-LLVTPYYN-K-P---TQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERLSKVPN----IIGIK 183 (314)
T ss_dssp H--TTCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHHHTSTT----EEEEE
T ss_pred H--cCCCEE-EEcCCCCC-C-C---CHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCC----EEEEE
Confidence 3 134444 23355554 1 2 37888888888998889999998742 12244444444422 12233
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 184 dssgd~~~~~~~~~~ 198 (314)
T 3qze_A 184 EATGDLQRAKEVIER 198 (314)
T ss_dssp ECSCCHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 456888777776653
No 147
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=69.18 E-value=1.4 Score=43.41 Aligned_cols=30 Identities=17% Similarity=0.237 Sum_probs=24.0
Q ss_pred HHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 377 ILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 377 v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
+++.++++ +++.+++.++++.|+.|||+-+
T Consensus 277 ~~~~l~~l-~l~~~~~~~i~~~NA~rl~~~~ 306 (312)
T 3ij6_A 277 ITQAINDL-TISDKDKQKIFHDNYYSLIKEG 306 (312)
T ss_dssp HHHHHHTS-SSCHHHHHHHHTHHHHHHHCC-
T ss_pred HHHHHHHc-CCCHHHHHHHHHHHHHHHHhCc
Confidence 34555666 8999999999999999999765
No 148
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=68.34 E-value=12 Score=36.34 Aligned_cols=38 Identities=8% Similarity=0.061 Sum_probs=28.0
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
|++|.|+|.....- | ....+++++++|.+.|+..+.+.
T Consensus 1 m~~D~H~Ht~~s~~-----~----~~~~~~e~~~~A~~~G~~~i~~T 38 (283)
T 3dcp_A 1 MKRDGHTHTEFCPH-----G----THDDVEEMVLKAIELDFDEYSIV 38 (283)
T ss_dssp CCEEEEECCTTCTT-----S----CCCCHHHHHHHHHHTTCCEEEEE
T ss_pred CCeEEeeCCCCCCC-----C----CCCCHHHHHHHHHHCCCCEEEEe
Confidence 47999999854211 1 01368999999999999977665
No 149
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=67.37 E-value=80 Score=29.35 Aligned_cols=133 Identities=13% Similarity=0.101 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC--------CHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHh
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT--------NVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKE 99 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~--------~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~ 99 (487)
.++++.++.+++.|.+.+=+.+. +..+...+.+++++++--..+++.|.... .....+..++.+++.+..
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~ 92 (286)
T 3dx5_A 15 ISFTDIVQFAYENGFEGIELWGTHAQNLYMQEYETTERELNCLKDKTLEITMISDYLDIS--LSADFEKTIEKCEQLAIL 92 (286)
T ss_dssp CCHHHHHHHHHHTTCCEEEEEHHHHHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCS--TTSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEEcccccccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCC--CchhHHHHHHHHHHHHHH
Confidence 47999999999999987655432 12444555566666654344444332111 111122334444443322
Q ss_pred ---cCCCEEEEEeeCCCCCCC-CCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-----chHHHHHHHHHhCC
Q psy4448 100 ---GGKKVVAFGEFGLDYDRV-QYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-----AKSDFIEIMKEYAP 163 (487)
Q Consensus 100 ---~~~~vvaIGEIGLD~~~~-~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-----a~~d~l~iLk~~~~ 163 (487)
-..+.+.+ -.|...... ....++.-.+.|++..++|+++|+.+.||.-. ..+++.+++++.+.
T Consensus 93 A~~lG~~~v~~-~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~~~ 164 (286)
T 3dx5_A 93 ANWFKTNKIRT-FAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEVDH 164 (286)
T ss_dssp HHHHTCCEEEE-CSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHHCC
T ss_pred HHHhCCCEEEE-cCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhcCC
Confidence 11123322 234332110 00123445677888999999999999999863 35678888887753
No 150
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=67.30 E-value=87 Score=31.11 Aligned_cols=136 Identities=10% Similarity=0.106 Sum_probs=78.4
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. ++ |+..+|-. . ..+.++..+. +.
T Consensus 54 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~--s-------t~eai~la~~-A~ 123 (343)
T 2v9d_A 54 TAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGT--N-------ARETIELSQH-AQ 123 (343)
T ss_dssp HHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSS--C-------HHHHHHHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC--C-------HHHHHHHHHH-HH
Confidence 446777778899999998886 456666666654332 33 55555521 1 2333433333 33
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHH-HHHHHhCCCCCCcEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFI-EIMKEYAPKLPRKGVI 171 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~~v~ 171 (487)
+. .+.||= +-..||. . ..|..+++..-++|...++||+|...- -.-+++ ++.++.+. -+-+
T Consensus 124 ~~--Gadavl-v~~P~Y~-~----~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~~pn----Ivgi 191 (343)
T 2v9d_A 124 QA--GADGIV-VINPYYW-K----VSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLADSRSN----IIGI 191 (343)
T ss_dssp HH--TCSEEE-EECCSSS-C----CCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHHHHCTT----EEEE
T ss_pred hc--CCCEEE-ECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHHHhCCC----EEEE
Confidence 31 233332 3355654 1 147888888889999999999998742 122444 44435532 1223
Q ss_pred EecCCCHHHHHHHHcC
Q psy4448 172 HSFDGTPFQAVDSLKT 187 (487)
Q Consensus 172 H~FsG~~~~a~~~l~~ 187 (487)
---+|+...+.++++.
T Consensus 192 Kdssgd~~~~~~l~~~ 207 (343)
T 2v9d_A 192 KDTIDSVAHLRSMIHT 207 (343)
T ss_dssp EECCSCHHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHh
Confidence 3456887777766643
No 151
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=67.11 E-value=81 Score=30.91 Aligned_cols=136 Identities=10% Similarity=0.047 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-. . ..+.++..+ .+.
T Consensus 47 l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~--~-------t~~ai~la~-~A~ 116 (315)
T 3na8_A 47 LGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDL--T-------TAKTVRRAQ-FAE 116 (315)
T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS--S-------HHHHHHHHH-HHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCC--C-------HHHHHHHHH-HHH
Confidence 445677777899999998886 456666666654332 33 45544421 1 233343333 343
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc------hHHHHHHH-HHhCCCCCCcEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA------KSDFIEIM-KEYAPKLPRKGVI 171 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a------~~d~l~iL-k~~~~~~~~~~v~ 171 (487)
+ -.+.|| =+--.||. . ..|..+++..-++|...++||+|...-+ ..+++.-| .+.+. ..+ +
T Consensus 117 ~--~Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L~a~~pn---Ivg-i 184 (315)
T 3na8_A 117 S--LGAEAV-MVLPISYW-K----LNEAEVFQHYRAVGEAIGVPVMLYNNPGTSGIDMSVELILRIVREVDN---VTM-V 184 (315)
T ss_dssp H--TTCSEE-EECCCCSS-C----CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHSTT---EEE-E
T ss_pred h--cCCCEE-EECCCCCC-C----CCHHHHHHHHHHHHHhCCCcEEEEeCcchhCcCCCHHHHHHHHhcCCC---EEE-E
Confidence 3 134444 24455654 1 2478888888899999999999988431 23555555 66532 123 3
Q ss_pred EecCCCHHHHHHHHcC
Q psy4448 172 HSFDGTPFQAVDSLKT 187 (487)
Q Consensus 172 H~FsG~~~~a~~~l~~ 187 (487)
---+|+.....++++.
T Consensus 185 Kdssgd~~~~~~~~~~ 200 (315)
T 3na8_A 185 KESTGDIQRMHKLRLL 200 (315)
T ss_dssp EECSSCHHHHHHHHHH
T ss_pred ECCCCCHHHHHHHHHH
Confidence 4456888777776654
No 152
>4d9a_A 2-pyrone-4,6-dicarbaxylate hydrolase; structural genomics, protein structure initiative; HET: 0GY; 1.35A {Sphingomonas paucimobilis} PDB: 4d95_A* 4di8_A* 4di9_A* 4d9d_A 4dia_A 2qah_A 4d8l_A
Probab=66.84 E-value=11 Score=36.81 Aligned_cols=149 Identities=9% Similarity=-0.006 Sum_probs=77.8
Q ss_pred HHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC-CcCCCchhhHHHHHHHHHhcCCCEEEEEe
Q psy4448 31 DHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS-EFENDPEGYLQSLDKIIKEGGKKVVAFGE 109 (487)
Q Consensus 31 ~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~-~~~~~~~~~l~~L~~ll~~~~~~vvaIGE 109 (487)
+.+++...+.+-...-++.+++......++-.... . +.++.++|.... ... ....+..++. .+.|
T Consensus 84 ~~ll~~l~~~~~r~~Gva~vdp~~~~~eL~~l~~~-G-~rGvR~~~~~~~~~~~-----~~~~~~~~~~-------~l~~ 149 (303)
T 4d9a_A 84 AATLDAIARAQGKARGIAVVDPAIDEAELAALHEG-G-MRGIRFNFLKRLVDDA-----PKDKFLEVAG-------RLPA 149 (303)
T ss_dssp HHHHHHHHHTTTSEEEEECCCTTCCHHHHHHHHHT-T-EEEEEEECCTTTCSCC-----CHHHHHHHHT-------SCCT
T ss_pred HHHHHHHHhCCCcEEEEEEeCCCCCHHHHHHHHHC-C-CCEEEeecccCCcccc-----CHHHHHHHHH-------HHhc
Confidence 34555444444333333456665433222222333 2 457777775431 111 1234555553 2557
Q ss_pred eCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEE-EecC----------chHHHHHHHHHhCCCCCCcEEEEecCCCH
Q psy4448 110 FGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFL-HCRN----------AKSDFIEIMKEYAPKLPRKGVIHSFDGTP 178 (487)
Q Consensus 110 IGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViI-H~r~----------a~~d~l~iLk~~~~~~~~~~v~H~FsG~~ 178 (487)
|+-+.-.. . ..| +....++|++++++||| |.-. ..++++++++++++ +.+ =.||-.
T Consensus 150 -gl~v~l~~-~--~~~---l~~l~~~~~~~~~~iVidH~G~p~~~~g~~~~~~~~~~~l~~~~~N-----V~v-KlSg~~ 216 (303)
T 4d9a_A 150 -GWHVVIYF-E--ADI---LEELRPFMDAIPVPIVIDHMGRPDVRQGPDGADMKAFRRLLDSRED-----IWF-KATCPD 216 (303)
T ss_dssp -TCEEEEEC-C--GGG---HHHHHHHHHHCSSCEEEGGGGCCCGGGCTTSHHHHHHHHHHHHCTT-----EEE-ECCCHH
T ss_pred -CCEEEEec-c--ccc---HHHHHHHHHHCCCcEEEeCCCCCCcccCCCCHHHHHHHHHHhhCCC-----EEE-EeeCce
Confidence 77542101 1 123 34567888889998886 6653 35678888877543 111 133322
Q ss_pred H---------HHHHHHcCccchhHhhhcCCCceeeccCCCCCC
Q psy4448 179 F---------QAVDSLKTKENLETVKSIPEDRLLLETDCPWCE 212 (487)
Q Consensus 179 ~---------~a~~~l~~~~g~e~v~~iP~driLlETD~P~l~ 212 (487)
. .+..++ ..++... .||||+.||+|+..
T Consensus 217 ~~~~~~~~~~~~~~~~-----~~~~~~~-~dRlmfGSDwP~~~ 253 (303)
T 4d9a_A 217 RLDPAGPPWDDFARSV-----APLVADY-ADRVIWGTAWPHPN 253 (303)
T ss_dssp HHCTTCTTCHHHHHHH-----HHHHHHT-TTSEECCCCTTCTT
T ss_pred ecCCCCCCHHHHHHHH-----HHHHHhC-cccEEEecCCCCcc
Confidence 1 122222 2355666 79999999999985
No 153
>2gwn_A Dihydroorotase; zinc-binding prote structural genomics, PSI, protein structure initiative, MID center for structural genomics, MCSG; HET: KCX GOL; 1.85A {Porphyromonas gingivalis}
Probab=66.72 E-value=42 Score=34.07 Aligned_cols=23 Identities=13% Similarity=-0.038 Sum_probs=21.2
Q ss_pred hCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 385 RGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 385 kg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+++.+++.+.++.|.-++|++.
T Consensus 353 ~~ls~~~~l~~~T~~~A~~lgl~ 375 (452)
T 2gwn_A 353 GIFSIEEIVSKTAHIPATLFAIE 375 (452)
T ss_dssp TSSCHHHHHHHHTHHHHHHHTBT
T ss_pred CCCCHHHHHHHHhHhHHHHcCCC
Confidence 57999999999999999999985
No 154
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=66.60 E-value=38 Score=32.71 Aligned_cols=136 Identities=15% Similarity=0.156 Sum_probs=76.4
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC-CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD-ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG 101 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~-~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~ 101 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. ..++..+|-. . ..+.++.. +.+.+
T Consensus 21 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gvg~~--~-------t~~ai~la-~~A~~-- 88 (286)
T 2r91_A 21 FANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQVASL--N-------ADEAIALA-KYAES-- 88 (286)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEECCCS--S-------HHHHHHHH-HHHHH--
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEeeCCC--C-------HHHHHHHH-HHHHh--
Confidence 456777788899999998886 466677777765432 2366555521 1 22334333 33433
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc---hHHHHHHHHHhCCCCCCcEEEEecCCCH
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA---KSDFIEIMKEYAPKLPRKGVIHSFDGTP 178 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a---~~d~l~iLk~~~~~~~~~~v~H~FsG~~ 178 (487)
-.+.|| =+--.||. .. ..|..+++..-++|...++||+|...-. ..-..+.+.+.+. ..+ +---+|+.
T Consensus 89 ~Gadav-lv~~P~y~-~~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~~pn---ivg-iKds~gd~ 159 (286)
T 2r91_A 89 RGAEAV-ASLPPYYF-PR---LSERQIAKYFRDLCSAVSIPVFLYNYPAAVGRDVDARAAKELGC---IRG-VKDTNESL 159 (286)
T ss_dssp TTCSEE-EECCSCSS-TT---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSSCCCHHHHHHHSC---EEE-EEECCSCH
T ss_pred cCCCEE-EEcCCcCC-CC---CCHHHHHHHHHHHHHhcCCCEEEEeChhhcCCCCCHHHHHhcCC---EEE-EEeCCCCH
Confidence 133444 23455654 10 1478888888889999999999987421 1111222322321 122 33345777
Q ss_pred HHHHHHHc
Q psy4448 179 FQAVDSLK 186 (487)
Q Consensus 179 ~~a~~~l~ 186 (487)
....++++
T Consensus 160 ~~~~~~~~ 167 (286)
T 2r91_A 160 AHTLAYKR 167 (286)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66665553
No 155
>2puz_A Imidazolonepropionase; NYSGXRC, PSI-2, N-formimino-L- glutamate, product-bound, structural genomics, protein STRU initiative; HET: NIG; 1.83A {Agrobacterium tumefaciens str} SCOP: b.92.1.10 c.1.9.17 PDB: 2gok_A
Probab=66.57 E-value=59 Score=32.12 Aligned_cols=57 Identities=18% Similarity=0.093 Sum_probs=40.9
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCchH-HHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAKS-DFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~~-d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
+.+++.+++|.+.++++.+|+-.... +.++.+.+.+. ..+-||+.-+.+.++.+.+.
T Consensus 235 ~~~~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~----~~~~H~~~~~~~~~~~~~~~ 292 (419)
T 2puz_A 235 KEIDRVFAAAQQRGLPVKLHAEQLSNLGGAELAASYNA----LSADHLEYLDETGAKALAKA 292 (419)
T ss_dssp HHHHHHHHHHHHTTCCBEEEESSSSCCSHHHHHHHTTC----SEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCcEEEEecccccCCHHHHHHhcCC----ceehHhccCCHHHHHHHHHc
Confidence 46788899999999999999964321 23444555432 45779998888888777665
No 156
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=66.31 E-value=56 Score=30.12 Aligned_cols=136 Identities=9% Similarity=0.004 Sum_probs=70.2
Q ss_pred CCCHHHHHHHHHhcCCCEEEEE-CCCH------HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHH-
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVT-GTNV------EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIK- 98 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v-~~~~------~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~- 98 (487)
..++++.++.+.+.|++.+=+. ...+ .+.+.+.+++++++--..+++.............+..++.+++.+.
T Consensus 13 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 92 (278)
T 1i60_A 13 NSNLKLDLELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQTHHIKPLALNALVFFNNRDEKGHNEIITEFKGMMET 92 (278)
T ss_dssp TCCHHHHHHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHHTSSCEEEEEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHHHcCCCeeeeccccccccCCHHHHHHHHHHHHHHHHH
Confidence 3588999999999999876554 3222 3445566666666533333322111110000000112333333332
Q ss_pred --hcCCCEEEEEeeCCCCCCCC-CCChHHHHHHHHHHHHHhhhCCCCEEEEecCc-------hHHHHHHHHHhCC
Q psy4448 99 --EGGKKVVAFGEFGLDYDRVQ-YCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA-------KSDFIEIMKEYAP 163 (487)
Q Consensus 99 --~~~~~vvaIGEIGLD~~~~~-~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a-------~~d~l~iLk~~~~ 163 (487)
.-..+.+.+ -.|.+..... ...++.-.+.|++..++|+++|..+.||.... .+++.+++++.+.
T Consensus 93 a~~lG~~~v~~-~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~~~~~~ 166 (278)
T 1i60_A 93 CKTLGVKYVVA-VPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIVNTVNR 166 (278)
T ss_dssp HHHHTCCEEEE-ECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHHHHHCC
T ss_pred HHHcCCCEEEE-ecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHHHHhCC
Confidence 111223333 1233211000 01134456677888888899999999987643 4678888887753
No 157
>3b0x_A DNA polymerase beta family (X family); structural genomics, riken structural genomics/proteomics in RSGI, polxc, PHP, DRP lyase; HET: DNA DGT; 1.36A {Thermus thermophilus} PDB: 3au2_A* 3au6_A* 3auo_A* 3b0y_A*
Probab=65.57 E-value=6.4 Score=42.31 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=29.6
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
+++|.|||..... | ..++++++++|.+.|+..+.+.
T Consensus 337 ~~~DlH~HT~~SD------G-----~~t~ee~v~~A~~~G~~~iaiT 372 (575)
T 3b0x_A 337 VKGDLQVHSTYSD------G-----QNTLEELWEAAKTMGYRYLAVT 372 (575)
T ss_dssp CCEEEEECCTTTT------C-----SCCHHHHHHHHHHTTCSEEEEE
T ss_pred cCeeEeecCCccC------C-----CCCHHHHHHHHHHCCCCEEEEc
Confidence 5799999987531 3 5789999999999999987765
No 158
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=65.11 E-value=1e+02 Score=29.86 Aligned_cols=137 Identities=14% Similarity=0.151 Sum_probs=78.0
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. +++-.-+|+=-.. ..+.++.. +.+.+
T Consensus 39 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~s-------t~~ai~la-~~A~~- 109 (304)
T 3cpr_A 39 GREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNN-------TRTSVELA-EAAAS- 109 (304)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSC-------HHHHHHHH-HHHHH-
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCC-------HHHHHHHH-HHHHh-
Confidence 446777778899999998886 466666776664432 3433334442211 22334333 33443
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEec
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHSF 174 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~F 174 (487)
-.+.||= +--.||. . . .|..+++..-++|...++||+|...- -.-+++.-|.+.+. -+-+---
T Consensus 110 -~Gadavl-v~~P~y~-~-~---~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----IvgiKds 178 (304)
T 3cpr_A 110 -AGADGLL-VVTPYYS-K-P---SQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRLSELPT----ILAVXDA 178 (304)
T ss_dssp -TTCSEEE-EECCCSS-C-C---CHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTT----EEEEEEC
T ss_pred -cCCCEEE-ECCCCCC-C-C---CHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCC----EEEEecC
Confidence 1333442 3345654 1 2 38888888889999999999997632 12244443433321 1223345
Q ss_pred CCCHHHHHHHHc
Q psy4448 175 DGTPFQAVDSLK 186 (487)
Q Consensus 175 sG~~~~a~~~l~ 186 (487)
+|+.....++++
T Consensus 179 sgd~~~~~~~~~ 190 (304)
T 3cpr_A 179 KGDLVAATSLIK 190 (304)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 688877776664
No 159
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=64.82 E-value=1e+02 Score=29.69 Aligned_cols=137 Identities=17% Similarity=0.106 Sum_probs=78.6
Q ss_pred CHHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHH
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKII 97 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll 97 (487)
.+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-.- ..+.++..+ .+
T Consensus 24 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~---------t~~ai~la~-~a 93 (292)
T 3daq_A 24 ALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTND---------TEKSIQASI-QA 93 (292)
T ss_dssp HHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSC---------HHHHHHHHH-HH
T ss_pred HHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCccc---------HHHHHHHHH-HH
Confidence 3456777778899999998876 456666666654332 33 444444211 223343333 33
Q ss_pred HhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEE
Q psy4448 98 KEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVI 171 (487)
Q Consensus 98 ~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~ 171 (487)
.+- .+.|| =+-..||. . . .|..+++..-++|...++||+|...- -.-+++.-|.+.+. -+-+
T Consensus 94 ~~~--Gadav-lv~~P~y~-~-~---~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----ivgi 161 (292)
T 3daq_A 94 KAL--GADAI-MLITPYYN-K-T---NQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEILSQHPY----IVAL 161 (292)
T ss_dssp HHH--TCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHHHTSTT----EEEE
T ss_pred HHc--CCCEE-EECCCCCC-C-C---CHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCC----EEEE
Confidence 331 23344 23455554 1 2 37778888888888889999988732 12344444444422 1223
Q ss_pred EecCCCHHHHHHHHcC
Q psy4448 172 HSFDGTPFQAVDSLKT 187 (487)
Q Consensus 172 H~FsG~~~~a~~~l~~ 187 (487)
---+|+.....++++.
T Consensus 162 K~ssgd~~~~~~~~~~ 177 (292)
T 3daq_A 162 KDATNDFEYLEEVKKR 177 (292)
T ss_dssp EECCCCHHHHHHHHTT
T ss_pred EeCCCCHHHHHHHHHH
Confidence 4456888877777654
No 160
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=64.24 E-value=47 Score=32.12 Aligned_cols=102 Identities=14% Similarity=0.149 Sum_probs=63.5
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC-CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD-ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG 101 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~-~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~ 101 (487)
+...++...+.|+..+++.|+ +.++..++++.+.+. ..++..+|-. . ..+.++ +.+.+.+
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGvg~~--~-------t~~ai~-la~~A~~-- 89 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQVGSL--N-------LNDVME-LVKFSNE-- 89 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEECCCS--C-------HHHHHH-HHHHHHT--
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEeeCCC--C-------HHHHHH-HHHHHHh--
Confidence 446777778899999998886 466777777776554 2355554421 1 223333 3333443
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEec
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR 148 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r 148 (487)
-.+.|| =+--.||.. . ..|..+++..-++|...++||+|...
T Consensus 90 ~Gadav-lv~~P~y~~-~---~s~~~l~~~f~~va~a~~lPiilYn~ 131 (288)
T 2nuw_A 90 MDILGV-SSHSPYYFP-R---LPEKFLAKYYEEIARISSHSLYIYNY 131 (288)
T ss_dssp SCCSEE-EECCCCSSC-S---CCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred cCCCEE-EEcCCcCCC-C---CCHHHHHHHHHHHHHhcCCCEEEEEC
Confidence 233444 233555541 0 24788888888899999999999874
No 161
>2q01_A Uronate isomerase; structural genomics, protein structure initiative NEW YORK SGX research center for structural genomics, nysgx; 2.34A {Caulobacter crescentus}
Probab=64.21 E-value=2.7 Score=44.47 Aligned_cols=31 Identities=16% Similarity=0.278 Sum_probs=22.9
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEe---ccchHHHH
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHC---RNAKSDFI 279 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~---r~a~~~~l 279 (487)
+-.++..-+.++.+.|+|+=||. |+...+++
T Consensus 288 ~~~ll~~l~~~~~e~gw~mQlH~Ga~Rn~n~~m~ 321 (497)
T 2q01_A 288 RAQMLTEMAKMSLDDGLVMQIHPGSHRNHNVGLL 321 (497)
T ss_dssp HHHHHHHHHHHHHHHCCEEEECCCEECCCCHHHH
T ss_pred HHHHHHHHHHHHHhcCCcEEEeeccCCCCCHHHH
Confidence 33566667788999999999998 56555554
No 162
>3tc3_A UV damage endonuclease; TIM-barrel, hydrolase; 1.50A {Sulfolobus acidocaldarius}
Probab=63.98 E-value=32 Score=34.02 Aligned_cols=74 Identities=16% Similarity=0.192 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHhhhCCCCEEEEecC--------------------chHHHHHHHHHhCCCCCCcEEEEecC--CC-HHHH
Q psy4448 125 QLKYFRKQLDLSVTHKLPLFLHCRN--------------------AKSDFIEIMKEYAPKLPRKGVIHSFD--GT-PFQA 181 (487)
Q Consensus 125 Q~~vF~~qL~LA~el~lPViIH~r~--------------------a~~d~l~iLk~~~~~~~~~~v~H~Fs--G~-~~~a 181 (487)
-.+.|.+.=++|+++|.-|++|--. .+.++++.+ +.. ..+++|.-+ |+ .+.+
T Consensus 100 ~~~~l~~iG~~a~~~~iRLS~HPgqF~vL~S~~~~Vv~~SI~dL~yHa~~ld~m---G~~--~~i~IH~Gg~yGdK~~al 174 (310)
T 3tc3_A 100 LSHILGDIGDFIKENSIRISMHPGQYVVLNSVREEVVRSSIMELKYHADLLDSM---GIE--GKIQIHVGSSMNGKEESL 174 (310)
T ss_dssp THHHHHHHHHHHHHTTCEEEECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHH---TCC--CEEEEECCCCTTCHHHHH
T ss_pred HHHHHHHHHHHHHHcCcEEEecCCCCccCCCCCHHHHHHHHHHHHHHHHHHHhc---CCC--cCceeecCCcCCCHHHHH
Confidence 3455677777788888888888654 122333333 322 257889622 34 3444
Q ss_pred HHHHcCccchhHhhhcC---CCceeeccCCC
Q psy4448 182 VDSLKTKENLETVKSIP---EDRLLLETDCP 209 (487)
Q Consensus 182 ~~~l~~~~g~e~v~~iP---~driLlETD~P 209 (487)
+++.+. ++.+| ..||.||.|.=
T Consensus 175 ~Rf~~n------~~~L~~~vk~RL~lENDdk 199 (310)
T 3tc3_A 175 NRFIEN------FRKLPSNISKRLVIENDDK 199 (310)
T ss_dssp HHHHHH------HTTSCHHHHTTEEEECCSS
T ss_pred HHHHHH------HHhCCHhhheEEEEecCCc
Confidence 455442 22333 34999999973
No 163
>3hm7_A Allantoinase; metallo-dependent hydrolase, protein structure initiative, PSI-2, NEW YORK structural genomix research CON nysgxrc; 2.60A {Bacillus halodurans}
Probab=63.65 E-value=5.9 Score=40.37 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=30.9
Q ss_pred ccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 372 ANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 372 ~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
..+..+++.+....+++.+++.+.++.|..++|++.
T Consensus 343 ~~l~~~~~~~~~~~~l~~~~~~~~~t~~~A~~~g~~ 378 (448)
T 3hm7_A 343 NTLAVMLTEGYHKRKMPLTQIVQLLSTEPAKRFGLY 378 (448)
T ss_dssp THHHHHHHHTTTTTCCCHHHHHHHHTHHHHHHHTCT
T ss_pred HHHHHHHHHHHhcCCcCHHHHHHHHhHHHHHHcCCC
Confidence 567777776667788999999999999999999984
No 164
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=63.35 E-value=52 Score=33.28 Aligned_cols=117 Identities=15% Similarity=0.218 Sum_probs=72.7
Q ss_pred HHHHHHHHhhhCCCCEEE-Ee---------ccchHHHHHHHHHhCCCCCCCcEEEEeeCCccccc----ccccc-hhhH-
Q psy4448 252 YFRKQLDLSVTHKLPLFL-HC---------RNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAV----DSLKT-KENL- 315 (487)
Q Consensus 252 ~F~~ql~lA~~~~lPl~i-H~---------r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~~----~~~k~-~~~~- 315 (487)
-|..-|+++ ..||+. |+ |+--++.++.|.+.. =+++++....... .++.. .+..
T Consensus 203 ~~~dvl~~s---~~PviaSHSn~ral~~h~RNl~De~l~~la~~G-------Gvigv~~~~~fl~~~~~~t~~~~~~hi~ 272 (369)
T 1itu_A 203 TMKATLQLS---RAPVIFSHSSAYSVCASRRNVPDDVLRLVKQTD-------SLVMVNFYNNYISCTNKANLSQVADHLD 272 (369)
T ss_dssp HHHHHHHHC---SSCCEESSCCBTTTSCCTTSBCHHHHHHHHHHT-------CEEEECCCHHHHTSSSCCBHHHHHHHHH
T ss_pred HHHHHHHhc---CCCEEEeCCChhhcCCCCCCCCHHHHHHHHHcC-------CeEEEEechhhcCCCCCCCHHHHHHHHH
Confidence 344445555 569774 54 566799999998863 2556554211000 11100 0112
Q ss_pred HHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHH
Q psy4448 316 ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPI 395 (487)
Q Consensus 316 e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~ 395 (487)
-+++.+..|.+-|=||--.....| .+-..++.++.+++.+.+ +|.+.+++..+
T Consensus 273 hi~~~~G~dhVgiGsDfdG~~~~p--------------------------~gl~d~~~~p~l~~~L~~-~G~se~~i~ki 325 (369)
T 1itu_A 273 HIKEVAGARAVGFGGDFDGVPRVP--------------------------EGLEDVSKYPDLIAELLR-RNWTEAEVKGA 325 (369)
T ss_dssp HHHHHHCGGGEEECCCTTSCSCCC--------------------------BTCSSTTCHHHHHHHHHH-TTCCHHHHHHH
T ss_pred HHHHhhCCCeEEECCCCCCCCCCC--------------------------CCCCCHHHHHHHHHHHHH-cCCCHHHHHHH
Confidence 256778999999999974321111 122345566777666655 79999999999
Q ss_pred HHHHHHHhcC
Q psy4448 396 IHQNTLRLFF 405 (487)
Q Consensus 396 ~~~N~~rlf~ 405 (487)
+..|+.|+|+
T Consensus 326 ~g~N~lRvl~ 335 (369)
T 1itu_A 326 LADNLLRVFE 335 (369)
T ss_dssp HTHHHHHHHH
T ss_pred HhHhHHHHHH
Confidence 9999999995
No 165
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=63.26 E-value=45 Score=32.73 Aligned_cols=135 Identities=9% Similarity=0.101 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...++||..+++.|+ +.++..++++.+.+. ++ ++..+| + . ..+.++..+...+
T Consensus 35 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg-~--~-------t~~ai~la~~A~~ 104 (316)
T 3e96_A 35 YKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG-Y--A-------TSTAIELGNAAKA 104 (316)
T ss_dssp HHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-S--S-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC-c--C-------HHHHHHHHHHHHh
Confidence 445777788899999988876 456666676654332 34 455555 2 1 1233443333322
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC--chHHHHHHHHHhCCCCCCcEEEEecCC
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN--AKSDFIEIMKEYAPKLPRKGVIHSFDG 176 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~--a~~d~l~iLk~~~~~~~~~~v~H~FsG 176 (487)
. .+.|| =+-..||. . ..|..+++..-++|...++||+|..+. -..+++.-|.+.+. ..+ +---+|
T Consensus 105 ~---Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~g~~l~~~~~~~La~~pn---Ivg-iKdssg 171 (316)
T 3e96_A 105 A---GADAV-MIHMPIHP-Y----VTAGGVYAYFRDIIEALDFPSLVYFKDPEISDRVLVDLAPLQN---LVG-VKYAIN 171 (316)
T ss_dssp H---TCSEE-EECCCCCS-C----CCHHHHHHHHHHHHHHHTSCEEEEECCTTSCTHHHHHHTTCTT---EEE-EEECCC
T ss_pred c---CCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCCHHHHHHHHcCCC---EEE-EEeCCC
Confidence 2 23344 23456654 1 248888888888888889999999862 22244444433322 123 333468
Q ss_pred CHHHHHHHHcC
Q psy4448 177 TPFQAVDSLKT 187 (487)
Q Consensus 177 ~~~~a~~~l~~ 187 (487)
+.....++++.
T Consensus 172 d~~~~~~~~~~ 182 (316)
T 3e96_A 172 DLPRFAKVVRS 182 (316)
T ss_dssp CHHHHHHHHTT
T ss_pred CHHHHHHHHHh
Confidence 88777766654
No 166
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=63.07 E-value=57 Score=31.98 Aligned_cols=137 Identities=11% Similarity=0.061 Sum_probs=77.4
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. +++-.-+|+=- . ..+.++.. +.+.+
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~-s-------t~~ai~la-~~A~~- 104 (314)
T 3d0c_A 35 LDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY-S-------VDTAIELG-KSAID- 104 (314)
T ss_dssp HHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS-S-------HHHHHHHH-HHHHH-
T ss_pred HHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc-C-------HHHHHHHH-HHHHH-
Confidence 446777778899999988875 566677776664432 34333334422 2 12334333 33443
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch--HHHHHHHHHhCCCCCCcEEEEecCCCH
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK--SDFIEIMKEYAPKLPRKGVIHSFDGTP 178 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~--~d~l~iLk~~~~~~~~~~v~H~FsG~~ 178 (487)
-.+.|| =+--.||. . . .|..+++..-++|...++||+|..|-.. .+++.-|.+.+ .-+-+---+|+.
T Consensus 105 -~Gadav-lv~~P~y~-~-~---s~~~l~~~f~~va~a~~lPiilYn~tg~l~~~~~~~La~~p----nIvgiKdssgd~ 173 (314)
T 3d0c_A 105 -SGADCV-MIHQPVHP-Y-I---TDAGAVEYYRNIIEALDAPSIIYFKDAHLSDDVIKELAPLD----KLVGIKYAINDI 173 (314)
T ss_dssp -TTCSEE-EECCCCCS-C-C---CHHHHHHHHHHHHHHSSSCEEEEECCTTSCTHHHHHHTTCT----TEEEEEECCCCH
T ss_pred -cCCCEE-EECCCCCC-C-C---CHHHHHHHHHHHHHhCCCCEEEEeCCCCcCHHHHHHHHcCC----CEEEEEeCCCCH
Confidence 134444 23455654 1 2 3788888888999999999999874322 23333332322 112344456787
Q ss_pred HHHHHHHcC
Q psy4448 179 FQAVDSLKT 187 (487)
Q Consensus 179 ~~a~~~l~~ 187 (487)
..+.++++.
T Consensus 174 ~~~~~~~~~ 182 (314)
T 3d0c_A 174 QRVTQVMRA 182 (314)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777666543
No 167
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=62.94 E-value=89 Score=30.13 Aligned_cols=41 Identities=15% Similarity=0.282 Sum_probs=31.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHhC
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEYA 162 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~~ 162 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+...
T Consensus 52 s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~a~ 93 (292)
T 2ojp_A 52 NHDEHADVVMMTLDLADG-RIPVIAGTGANATAEAISLTQRFN 93 (292)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHHH
Confidence 467788899988888765 6899988865 5677777776553
No 168
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=62.66 E-value=1.2e+02 Score=29.83 Aligned_cols=136 Identities=12% Similarity=0.081 Sum_probs=78.0
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. ++ |++.+|- .. ..+.++..+. +.
T Consensus 57 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~--~s-------t~eai~la~~-A~ 126 (332)
T 2r8w_A 57 FSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIGA--LR-------TDEAVALAKD-AE 126 (332)
T ss_dssp HHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECC--SS-------HHHHHHHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--CC-------HHHHHHHHHH-HH
Confidence 445777777899999998886 466666776654432 33 4444442 11 2233433333 33
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+- .+.|| =+--.||. . ..|..+++..-++|...++||+|...- -..+++.-|.+.+. .-+ +-
T Consensus 127 ~~--Gadav-lv~~P~Y~-~----~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La~~pn---Ivg-iK 194 (332)
T 2r8w_A 127 AA--GADAL-LLAPVSYT-P----LTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRLAYIPN---IRA-IK 194 (332)
T ss_dssp HH--TCSEE-EECCCCSS-C----CCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHHHTSTT---EEE-EE
T ss_pred hc--CCCEE-EECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHcCCC---EEE-EE
Confidence 31 23344 23456654 1 247888888888999999999998732 12344444434322 122 33
Q ss_pred ecCCC----HHHHHHHHcC
Q psy4448 173 SFDGT----PFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~----~~~a~~~l~~ 187 (487)
--+|+ ...+.++++.
T Consensus 195 dssgd~~~~~~~~~~l~~~ 213 (332)
T 2r8w_A 195 MPLPADADYAGELARLRPK 213 (332)
T ss_dssp ECCCTTCCHHHHHHHHTTT
T ss_pred eCCCCchhHHHHHHHHHHh
Confidence 45577 7777766643
No 169
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=62.46 E-value=1.1e+02 Score=29.33 Aligned_cols=137 Identities=14% Similarity=0.121 Sum_probs=77.8
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+...++...++|+..+++.|+ +.++..++++.+.+. +++-.-+|+=-.. ..+.++..+ .+.+-
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~-------t~~ai~la~-~a~~~ 94 (289)
T 2yxg_A 23 LEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNC-------TEEAIELSV-FAEDV 94 (289)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSS-------HHHHHHHHH-HHHHH
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC-------HHHHHHHHH-HHHhc
Confidence 456777788899999998886 456666666654432 3443334442211 223343333 33331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHH-HHHHHhCCCCCCcEEEEe
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFI-EIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~~v~H~ 173 (487)
.+.||= +--.||. . ..|..+++..-++|...++||+|...- -.-+++ ++.++.+. .-+ +--
T Consensus 95 --Gadavl-v~~P~y~-~----~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---ivg-iK~ 162 (289)
T 2yxg_A 95 --GADAVL-SITPYYN-K----PTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLAEEYSN---ISA-VKE 162 (289)
T ss_dssp --TCSEEE-EECCCSS-C----CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEE-EEE
T ss_pred --CCCEEE-ECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHHHhCCC---EEE-EEe
Confidence 233332 3345654 1 247888888888999999999998732 122444 44435532 122 344
Q ss_pred cCCCHHHHHHHHc
Q psy4448 174 FDGTPFQAVDSLK 186 (487)
Q Consensus 174 FsG~~~~a~~~l~ 186 (487)
-+|+.....++++
T Consensus 163 s~gd~~~~~~~~~ 175 (289)
T 2yxg_A 163 ANPNLSQVSELIH 175 (289)
T ss_dssp CCSCTHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5677777666654
No 170
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=62.33 E-value=6.8 Score=39.57 Aligned_cols=133 Identities=15% Similarity=0.091 Sum_probs=78.8
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCC-----------CCCCCcEEEEeeCCcccccc----------
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAP-----------KLPRKGVIHSFDGTPFQAVD---------- 307 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~-----------~~~~~gv~hsfsG~~~~~~~---------- 307 (487)
+.+.|++++++|+++|+||.+|+..+.+++..+++.... ..+...+.|++..+.+....
T Consensus 198 ~~~~l~~~~~~A~~~g~~v~iH~~~~~~~~~~~~~~~g~~~i~~~~~~g~~~~~~~~~H~~~~~~~~~~~~~~~g~~~~~ 277 (447)
T 4f0r_A 198 SDDTFRKVVTLAEQEDMLIHCHIHETADEVNNSVKEHGQRPLARLQRLGLLSPRLVAAHMVHLNDAEVELAARHGLSTAH 277 (447)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHSSCHHHHHHHHTCCSTTEEEEECCSCCHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCHHHHHHHcCCCCCCcEEEeccCCCHHHHHHHHHcCCEEEE
Confidence 457899999999999999999999998877776655422 11123455777665433100
Q ss_pred ----cccchhhH-HHhhhCCCC-ceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHH
Q psy4448 308 ----SLKTKENL-ETVKSIPED-RLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIV 381 (487)
Q Consensus 308 ----~~k~~~~~-e~v~~iPld-rlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~i 381 (487)
.++..... .+.+.+... ++.+.||+|..... ........+.......
T Consensus 278 ~p~~~~~~~~~~~~~~~~~~~Gv~v~lgTD~~~~~~~---------------------------~~~~~~~~~~~~~~~~ 330 (447)
T 4f0r_A 278 NPASNMKLASGISPVSKLMDAGVAVGIGTDGAASNNK---------------------------LDMLAETRLAALLAKV 330 (447)
T ss_dssp CHHHHHHTTCCCCCHHHHHHTTCEEEECCCCGGGTCC---------------------------CCHHHHHHHHHHHHHH
T ss_pred CchhhhhcCCCCCcHHHHHHCCCcEEEeCCCCcCCCC---------------------------CCHHHHHHHHHHHhhh
Confidence 01111111 222333444 78999999742100 0000111111122222
Q ss_pred HH--hhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 382 AA--VRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 382 A~--ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
.. -.+++.+++.+.++.|.-++|++..
T Consensus 331 ~~~~~~~l~~~~al~~~T~n~A~~lg~~~ 359 (447)
T 4f0r_A 331 GTLDPTSVPAAAAIRMATLNGARALGIAD 359 (447)
T ss_dssp HHTCTTSSCHHHHHHHHTHHHHHHTTCTT
T ss_pred hccCCCCCCHHHHHHHHHHHHHHHhCCCC
Confidence 22 2479999999999999999999863
No 171
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=62.16 E-value=5.3 Score=37.69 Aligned_cols=37 Identities=16% Similarity=0.302 Sum_probs=25.8
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHH---HHHHHHHhcCCCEEEE
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDID---HVLNRAWNAGLEKIIV 47 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~---~vl~ra~~~GV~~ii~ 47 (487)
.++|.|||.....- .| ..+.+ +++++|.+.|++.+++
T Consensus 4 ~m~D~H~Ht~~~~d----dg-----~~~~e~~~e~i~~A~~~Gi~~i~~ 43 (247)
T 2wje_A 4 GMIDIHSHIVFDVD----DG-----PKSREESKALLAESYRQGVRTIVS 43 (247)
T ss_dssp CEEECCBCCSTTSS----SS-----CSSHHHHHHHHHHHHHTTEEEEEC
T ss_pred CCEEEecccCCCCC----CC-----CCCHHHHHHHHHHHHHCCCCEEEE
Confidence 47999999953210 02 34555 6999999999987654
No 172
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=62.11 E-value=42 Score=32.53 Aligned_cols=136 Identities=17% Similarity=0.192 Sum_probs=76.2
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC-CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD-ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG 101 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~-~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~ 101 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. ..++..+|-. . ..+.++ +.+.+.+
T Consensus 22 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGvg~~--~-------t~~ai~-la~~A~~-- 89 (293)
T 1w3i_A 22 LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQVGGL--N-------LDDAIR-LAKLSKD-- 89 (293)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEECCCS--C-------HHHHHH-HHHHGGG--
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEecCCC--C-------HHHHHH-HHHHHHh--
Confidence 446777778899999998886 466777777776554 2355555521 1 123333 2333333
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc---hHHHHHHHHHhCCCCCCcEEEEecCCCH
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA---KSDFIEIMKEYAPKLPRKGVIHSFDGTP 178 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a---~~d~l~iLk~~~~~~~~~~v~H~FsG~~ 178 (487)
-.+.|| =+-..||.. . ..|..+++..-++|...++||+|...-+ ..-..+.+.+.+. ..+ +---+|+.
T Consensus 90 ~Gadav-lv~~P~y~~-~---~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~~pn---Ivg-iKds~gd~ 160 (293)
T 1w3i_A 90 FDIVGI-ASYAPYYYP-R---MSEKHLVKYFKTLCEVSPHPVYLYNYPTATGKDIDAKVAKEIGC---FTG-VKDTIENI 160 (293)
T ss_dssp SCCSEE-EEECCCSCS-S---CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHCC---EEE-EEECCSCH
T ss_pred cCCCEE-EEcCCCCCC-C---CCHHHHHHHHHHHHhhCCCCEEEEECchhhCcCCCHHHHHhcCC---EEE-EEeCCCCH
Confidence 123333 233455541 0 2478888888889999999999987421 1111223333321 123 33345777
Q ss_pred HHHHHHHc
Q psy4448 179 FQAVDSLK 186 (487)
Q Consensus 179 ~~a~~~l~ 186 (487)
..+.++++
T Consensus 161 ~~~~~~~~ 168 (293)
T 1w3i_A 161 IHTLDYKR 168 (293)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 76666554
No 173
>1j5s_A Uronate isomerase; TM0064, structural genomics, JCSG, PSI, protein structure initiative, joint center for structural genomics; 2.85A {Thermotoga maritima} SCOP: c.1.9.8
Probab=62.04 E-value=1.7 Score=45.57 Aligned_cols=24 Identities=8% Similarity=-0.033 Sum_probs=18.9
Q ss_pred hhHHHHHHHHHHhhhCCCCEEEEe
Q psy4448 248 ANIVYFRKQLDLSVTHKLPLFLHC 271 (487)
Q Consensus 248 ~Q~~~F~~ql~lA~~~~lPl~iH~ 271 (487)
.|-.++...+.++.+.|+|+=+|.
T Consensus 280 ~~~~ll~~l~~~~~e~g~~mQlH~ 303 (463)
T 1j5s_A 280 YKAFMMVQFGKMNQETNWVTQLHI 303 (463)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhcCCcEEEee
Confidence 344566667788999999999997
No 174
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=61.59 E-value=68 Score=30.70 Aligned_cols=107 Identities=11% Similarity=0.003 Sum_probs=69.3
Q ss_pred HhcCCCEEEEECCCHHhHHHHHHHHhcC-CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCC
Q psy4448 38 WNAGLEKIIVTGTNVEDSISSLKLAQSD-ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDR 116 (487)
Q Consensus 38 ~~~GV~~ii~v~~~~~~~~~~~~la~~~-~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~ 116 (487)
+..|++-++-.|..+...+.+++.+..| ..+..+.|-+--+ +.+.+.+.-+++.++ +=-+.-|=+=+.
T Consensus 11 R~~GlT~v~dkglg~~~~~d~Le~~g~yID~lKfg~Gt~~l~-------~~~~l~eki~l~~~~-gV~v~~GGTl~E--- 79 (251)
T 1qwg_A 11 FQRGLTVVLDKGLPPKFVEDYLKVCGDYIDFVKFGWGTSAVI-------DRDVVKEKINYYKDW-GIKVYPGGTLFE--- 79 (251)
T ss_dssp CCCCCEEEEESSCCHHHHHHHHHHHGGGCSEEEECTTGGGGS-------CHHHHHHHHHHHHTT-TCEEEECHHHHH---
T ss_pred cccCeeEEecCCCCHHHHHHHHHHhhhhcceEEecCceeeec-------CHHHHHHHHHHHHHc-CCeEECCcHHHH---
Confidence 3569999999999999999999999888 4567777765422 134456666666553 222333321011
Q ss_pred CCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC----chHHHHHHHHH
Q psy4448 117 VQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN----AKSDFIEIMKE 160 (487)
Q Consensus 117 ~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~----a~~d~l~iLk~ 160 (487)
...++..|...++.|++++...|==|.+ ..++-.++++.
T Consensus 80 -----~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~ 122 (251)
T 1qwg_A 80 -----YAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKR 122 (251)
T ss_dssp -----HHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHH
T ss_pred -----HHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHH
Confidence 2334458999999999999998855544 24444445443
No 175
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=60.95 E-value=95 Score=30.05 Aligned_cols=136 Identities=10% Similarity=0.126 Sum_probs=77.8
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|- .. ..+.++..+. +.
T Consensus 23 l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~--~~-------t~~ai~la~~-A~ 92 (297)
T 2rfg_A 23 LAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGS--NN-------PVEAVRYAQH-AQ 92 (297)
T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--SS-------HHHHHHHHHH-HH
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCC--CC-------HHHHHHHHHH-HH
Confidence 456777788899999998876 466666776654332 23 5555552 11 2233433333 33
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+- .+.|| =+-..||. . ..|..+++..-++|...++||+|...- -..+++.-|.+.+. ..+ +-
T Consensus 93 ~~--Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---Ivg-iK 160 (297)
T 2rfg_A 93 QA--GADAV-LCVAGYYN-R----PSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARLAALPR---IVG-VK 160 (297)
T ss_dssp HH--TCSEE-EECCCTTT-C----CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTT---EEE-EE
T ss_pred hc--CCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCC---EEE-EE
Confidence 31 23344 23355654 1 247888888888999999999998732 12344444434322 122 33
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+...+.++++.
T Consensus 161 ds~gd~~~~~~~~~~ 175 (297)
T 2rfg_A 161 DATTDLARISRERML 175 (297)
T ss_dssp ECSCCTTHHHHHHTT
T ss_pred eCCCCHHHHHHHHHh
Confidence 446777766666543
No 176
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=60.04 E-value=1e+02 Score=28.14 Aligned_cols=135 Identities=11% Similarity=0.035 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCC-C------CCCcCCCchhhHHHHHHHHH--
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPT-R------CSEFENDPEGYLQSLDKIIK-- 98 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~-~------~~~~~~~~~~~l~~L~~ll~-- 98 (487)
.++++.++.+++.|++.+=+......+.+.+.+++++++--..+++..+. + ........+..++.+++.++
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a 94 (260)
T 1k77_A 15 VPFIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYA 94 (260)
T ss_dssp SCGGGHHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHH
Confidence 46778899999999986544333333455666666666643444433211 0 00000001223344443332
Q ss_pred -hcCCCEEEEEeeCCCCCCCC-CCChHHHHHHHHHHHHHhhhCCCCEEEEecC----------chHHHHHHHHHhCC
Q psy4448 99 -EGGKKVVAFGEFGLDYDRVQ-YCPVETQLKYFRKQLDLSVTHKLPLFLHCRN----------AKSDFIEIMKEYAP 163 (487)
Q Consensus 99 -~~~~~vvaIGEIGLD~~~~~-~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~----------a~~d~l~iLk~~~~ 163 (487)
.-..+.+.+ -.|....... ...++.-.+.|++..+.|+++|..+.||... ..+++.+++++.+.
T Consensus 95 ~~lG~~~v~~-~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (260)
T 1k77_A 95 LALNCEQVHV-MAGVVPAGEDAERYRAVFIDNIRYAADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVAR 170 (260)
T ss_dssp HHTTCSEEEC-CCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGGTCEEEECCCCTTTSTTBSCCSHHHHHHHHHHHCC
T ss_pred HHcCCCEEEE-CcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCccCCCcCccCCHHHHHHHHHHhCC
Confidence 211223322 1332211000 0112345667788888898999999987752 34577888877653
No 177
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=59.86 E-value=57 Score=31.73 Aligned_cols=41 Identities=10% Similarity=0.081 Sum_probs=30.6
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++...+.+...+.||+.|+-. ...+++++.+..
T Consensus 58 s~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 58 THEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFA 99 (301)
T ss_dssp CHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHH
Confidence 46778888998888887657899988864 566777766543
No 178
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=59.30 E-value=1.3e+02 Score=29.17 Aligned_cols=140 Identities=9% Similarity=0.040 Sum_probs=80.4
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...++||..+++.|+ +.++..++++.+.+. ++ ++..+|-. . ..+.++.. +.+.
T Consensus 31 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~--~-------t~~ai~la-~~A~ 100 (309)
T 3fkr_A 31 QKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHY--S-------TQVCAARS-LRAQ 100 (309)
T ss_dssp HHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS--S-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCc--h-------HHHHHHHH-HHHH
Confidence 445777778899999999877 466666676664432 34 44444421 1 23334333 3344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc-----hHHHHHHH-HHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA-----KSDFIEIM-KEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a-----~~d~l~iL-k~~~~~~~~~~v~H 172 (487)
+ -.+.||= +--.||... .+..|..+++..-++|...++||+|...-. .-+++.-| ++.+. ..+|=.
T Consensus 101 ~--~Gadavl-v~~Pyy~~~--~~~s~~~l~~~f~~va~a~~lPiilYn~P~tg~~l~~~~~~~La~~~pn---IvgiK~ 172 (309)
T 3fkr_A 101 Q--LGAAMVM-AMPPYHGAT--FRVPEAQIFEFYARVSDAIAIPIMVQDAPASGTALSAPFLARMAREIEQ---VAYFXI 172 (309)
T ss_dssp H--TTCSEEE-ECCSCBTTT--BCCCHHHHHHHHHHHHHHCSSCEEEEECGGGCCCCCHHHHHHHHHHSTT---EEEEEE
T ss_pred H--cCCCEEE-EcCCCCccC--CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCCCHHHHHHHHhhCCC---EEEEEC
Confidence 3 1344442 334565210 112488899988999999999999987532 22454444 44543 233333
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+...+.++++.
T Consensus 173 ~~~~~~~~~~~~~~~ 187 (309)
T 3fkr_A 173 ETPGAANKLRELIRL 187 (309)
T ss_dssp CSSSHHHHHHHHHHH
T ss_pred CCcchHHHHHHHHHh
Confidence 456777666666554
No 179
>3iac_A Glucuronate isomerase; IDP02065, structural genom center for structural genomics of infectious diseases, CSGI; 2.22A {Salmonella typhimurium} SCOP: c.1.9.0
Probab=59.00 E-value=3.3 Score=43.47 Aligned_cols=60 Identities=15% Similarity=0.247 Sum_probs=35.9
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHH--------HHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHV--------LNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDE 66 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~v--------l~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~ 66 (487)
|.|||-|||++...+. .+ + ...|+.++ ...++.+||..=.++|.+.++.++-..+|+..|
T Consensus 30 lPIiDyH~Hl~P~~ia---en--~-~F~nit~lwl~gDHYkwR~mrs~Gv~e~~itG~~a~~~ekf~~~A~t~p 97 (473)
T 3iac_A 30 MPIYDFHCHLSPQEIA---DD--R-RFDNLGQIWLEGDHYKWRALRSAGVDESLITGKETSDYEKYMAWANTVP 97 (473)
T ss_dssp SCEEECSCCCCHHHHH---HT--C-CCSCHHHHHHSSCSHHHHHHHHTTCCGGGTTCTTSCHHHHHHHHHHHGG
T ss_pred CCEECCCCCCCHHHhc---cC--C-CCCCHHHHhccCchHHHHHHHHcCCCHHHccCCCCChHHHHHHHHHHHH
Confidence 7899999999964331 11 1 12455554 456889998644334545555555555555443
No 180
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=58.46 E-value=71 Score=30.95 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=23.7
Q ss_pred HHHHHHHHHHhhhCCCC---EEEEe----ccchHHHHHHHHHh
Q psy4448 250 IVYFRKQLDLSVTHKLP---LFLHC----RNAKSDFIEIMKEY 285 (487)
Q Consensus 250 ~~~F~~ql~lA~~~~lP---l~iH~----r~a~~~~l~il~~~ 285 (487)
..+|++.++.|.+.|.+ ++|=. -+..+.-+++|+..
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf~k~~~~n~~ll~~l 196 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDPGLGFAKTAQHNWAILHAL 196 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECCTTSSCCHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHcCCChhhEEEECCCCcccCHHHHHHHHHHH
Confidence 56788888888888887 66543 34455556666543
No 181
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=58.22 E-value=79 Score=30.49 Aligned_cols=136 Identities=13% Similarity=0.112 Sum_probs=77.6
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|- .. ..+.++.. +.+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~--~~-------t~~ai~la-~~a~ 93 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTGS--NN-------TAASIAMS-KWAE 93 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCC--SS-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCc--cc-------HHHHHHHH-HHHH
Confidence 456777788899999998876 466666766654332 23 4555542 11 22334333 3344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc------hHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA------KSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a------~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+ -.+.||= +-..||. . ..|..+++..-++|...++||+|+..-+ .-+++.-|.+.+. -.-+-
T Consensus 94 ~--~Gadavl-v~~P~y~-~----~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----ivgiK 161 (291)
T 3a5f_A 94 S--IGVDGLL-VITPYYN-K----TTQKGLVKHFKAVSDAVSTPIIIYNVPGRTGLNITPGTLKELCEDKN----IVAVX 161 (291)
T ss_dssp H--TTCSEEE-EECCCSS-C----CCHHHHHHHC-CTGGGCCSCEEEEECHHHHSCCCCHHHHHHHTTSTT----EEEEE
T ss_pred h--cCCCEEE-EcCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHHcCCC----EEEEe
Confidence 3 1333442 3355654 1 2488888888899999999999987321 2244433333321 12234
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 162 ~s~gd~~~~~~~~~~ 176 (291)
T 3a5f_A 162 EASGNISQIAQIKAL 176 (291)
T ss_dssp ECSCCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHh
Confidence 456888777766643
No 182
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=58.04 E-value=53 Score=32.33 Aligned_cols=48 Identities=8% Similarity=0.017 Sum_probs=34.4
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCCc
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTP 302 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~ 302 (487)
..+.+++.+++|+++|+|+.+|+... ..+.+.++ .. ...+-|++.-+.
T Consensus 210 ~~e~l~~~~~~A~~~g~~v~~H~~~~-~~i~~~l~-~g----~~~i~H~~~~~~ 257 (423)
T 3feq_A 210 SEDEIRAIVDEAEAANTYVMAHAYTG-RAIARAVR-CG----VRTIEHGNLVDE 257 (423)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEEEEH-HHHHHHHH-HT----CCEEEEEEECCH
T ss_pred CHHHHHHHHHHHHHCCCeEEEEeCCh-HHHHHHHH-cC----CCEEeccCcCCH
Confidence 34679999999999999999999843 44555554 32 235778776543
No 183
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=57.69 E-value=1.4e+02 Score=28.93 Aligned_cols=136 Identities=13% Similarity=0.136 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++..+...+.
T Consensus 38 l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~-------t~~ai~la~~a~~~- 109 (304)
T 3l21_A 38 AARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYD-------TAHSIRLAKACAAE- 109 (304)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSC-------HHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCC-------HHHHHHHHHHHHHc-
Confidence 445777778899999999887 456666676664432 4444445542111 23334433333222
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEec
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHSF 174 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~F 174 (487)
.+.|| =+--.||. . ..|..+++..-++|...++||+|...- -..+++.-|.+.+. ..+ +---
T Consensus 110 --Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---Ivg-iKds 177 (304)
T 3l21_A 110 --GAHGL-LVVTPYYS-K----PPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRALASHPN---IVG-VXDA 177 (304)
T ss_dssp --TCSEE-EEECCCSS-C----CCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTT---EEE-EEEC
T ss_pred --CCCEE-EECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHHhcCCC---EEE-EECC
Confidence 23333 23345554 1 248889999999999999999998632 22344444444432 123 3334
Q ss_pred CCCHHHHHHHH
Q psy4448 175 DGTPFQAVDSL 185 (487)
Q Consensus 175 sG~~~~a~~~l 185 (487)
+|+.....+++
T Consensus 178 sgd~~~~~~~~ 188 (304)
T 3l21_A 178 KADLHSGAQIM 188 (304)
T ss_dssp SCCHHHHHHHH
T ss_pred CCCHHHHHHHh
Confidence 68888777766
No 184
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=57.13 E-value=1e+02 Score=29.52 Aligned_cols=21 Identities=29% Similarity=0.368 Sum_probs=15.8
Q ss_pred CCHHHHHHHHHhcCCCEEEEE
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v 48 (487)
.++++.++++.++|++.+=+.
T Consensus 36 ~~l~~~l~~aa~~G~~~VEl~ 56 (305)
T 3obe_A 36 QDMPNGLNRLAKAGYTDLEIF 56 (305)
T ss_dssp TTHHHHHHHHHHHTCCEEEEC
T ss_pred cCHHHHHHHHHHcCCCEEEec
Confidence 378888899999998765443
No 185
>2w9m_A Polymerase X; SAXS, DNA repair, DNA polymerase, DNA replication; 2.46A {Deinococcus radiodurans}
Probab=56.27 E-value=8.4 Score=41.43 Aligned_cols=36 Identities=11% Similarity=-0.069 Sum_probs=29.4
Q ss_pred cEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 2 KYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 2 ~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
+++|.|||..... | ...+++++++|.+.|+..+.+.
T Consensus 327 ~~~DlH~HT~~SD------G-----~~t~eemv~~A~~~Gl~~IaiT 362 (578)
T 2w9m_A 327 LRGMIHTHSTWSD------G-----GASIREMAEATLTLGHEFLGTA 362 (578)
T ss_dssp CCEEEEECCTTTT------C-----SSCHHHHHHHHHHTTCSEEEEC
T ss_pred hceEEEecCCccC------C-----CCCHHHHHHHHHHCCCeEEEEc
Confidence 5799999987531 3 6789999999999999987664
No 186
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=56.26 E-value=1.5e+02 Score=28.77 Aligned_cols=139 Identities=8% Similarity=0.033 Sum_probs=80.7
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. +++-.-+|+=-.. ..+.++. .+.+.+
T Consensus 37 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~-------t~~ai~l-a~~A~~- 107 (307)
T 3s5o_A 37 LEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCES-------TQATVEM-TVSMAQ- 107 (307)
T ss_dssp HHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSS-------HHHHHHH-HHHHHH-
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCC-------HHHHHHH-HHHHHH-
Confidence 345667777899999999886 566777777776543 3443344542111 2333433 333443
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc------hHHHHHHHHHhCCCCCCcEEEEec
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA------KSDFIEIMKEYAPKLPRKGVIHSF 174 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a------~~d~l~iLk~~~~~~~~~~v~H~F 174 (487)
-.+.||= +--.||... ...|..+++..-++|...++||+|...-+ ..+++.-|.+.+. ..+ +---
T Consensus 108 -~Gadavl-v~~P~y~~~---~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---Ivg-iKds 178 (307)
T 3s5o_A 108 -VGADAAM-VVTPCYYRG---RMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTLSQHPN---IVG-MXDS 178 (307)
T ss_dssp -TTCSEEE-EECCCTTGG---GCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHTSTT---EEE-EEEC
T ss_pred -cCCCEEE-EcCCCcCCC---CCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHHhcCCC---EEE-EEcC
Confidence 1334442 334555411 12488888888899999999999988532 2344444444432 223 3334
Q ss_pred CCCHHHHHHHHc
Q psy4448 175 DGTPFQAVDSLK 186 (487)
Q Consensus 175 sG~~~~a~~~l~ 186 (487)
+|+...+.++++
T Consensus 179 sgd~~~~~~~~~ 190 (307)
T 3s5o_A 179 GGDVTRIGLIVH 190 (307)
T ss_dssp SCCHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 788877776664
No 187
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=56.21 E-value=1.5e+02 Score=28.70 Aligned_cols=136 Identities=9% Similarity=0.035 Sum_probs=79.4
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-.- ..+.++..+...+
T Consensus 27 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~---------t~~ai~la~~a~~ 97 (300)
T 3eb2_A 27 MGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVASTS---------VADAVAQAKLYEK 97 (300)
T ss_dssp HHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEEESS---------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC---------HHHHHHHHHHHHH
Confidence 445777778899999888776 466666666654332 33 566666321 2333444333322
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc------hHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA------KSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a------~~d~l~iLk~~~~~~~~~~v~H 172 (487)
. .+.|| =+--.||. . ..|..+++..-++|...++||+|...-+ ..+++.-|.+.+. -+-+-
T Consensus 98 ~---Gadav-lv~~P~y~-~----~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----IvgiK 164 (300)
T 3eb2_A 98 L---GADGI-LAILEAYF-P----LKDAQIESYFRAIADAVEIPVVIYTNPQFQRSDLTLDVIARLAEHPR----IRYIK 164 (300)
T ss_dssp H---TCSEE-EEEECCSS-C----CCHHHHHHHHHHHHHHCSSCEEEEECTTTCSSCCCHHHHHHHHTSTT----EEEEE
T ss_pred c---CCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHHCCCCEEEEECccccCCCCCHHHHHHHHcCCC----EEEEE
Confidence 2 23333 23345554 1 2478888888899999999999988421 2355555544422 12234
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 165 dssgd~~~~~~~~~~ 179 (300)
T 3eb2_A 165 DASTNTGRLLSIINR 179 (300)
T ss_dssp ECSSBHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHH
Confidence 456888777776654
No 188
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=56.18 E-value=1.5e+02 Score=28.65 Aligned_cols=136 Identities=12% Similarity=0.177 Sum_probs=78.6
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-. . ..+.++.. +.+.
T Consensus 30 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~--~-------t~~ai~la-~~a~ 99 (297)
T 3flu_A 30 LRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGAN--N-------TVEAIALS-QAAE 99 (297)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS--S-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCc--C-------HHHHHHHH-HHHH
Confidence 445677777899999999887 456666666654332 33 44444421 1 23334333 3344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+ -.+.|| =+--.||. . . .|..+++..-++|...++||+|...- -..+++.-|.+.+. ..+ +-
T Consensus 100 ~--~Gadav-lv~~P~y~-~-~---~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---ivg-iK 167 (297)
T 3flu_A 100 K--AGADYT-LSVVPYYN-K-P---SQEGIYQHFKTIAEATSIPMIIYNVPGRTVVSMTNDTILRLAEIPN---IVG-VK 167 (297)
T ss_dssp H--TTCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHHTTSTT---EEE-EE
T ss_pred H--cCCCEE-EECCCCCC-C-C---CHHHHHHHHHHHHHhCCCCEEEEECCchhccCCCHHHHHHHHcCCC---EEE-EE
Confidence 3 133444 23345554 1 2 37888888888999899999998742 12344444433321 122 33
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 168 dssgd~~~~~~~~~~ 182 (297)
T 3flu_A 168 EASGNIGSNIELINR 182 (297)
T ss_dssp ECSCCHHHHHHHHHH
T ss_pred eCCCCHHHHHHHHHh
Confidence 356888877776653
No 189
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=55.92 E-value=24 Score=35.85 Aligned_cols=90 Identities=13% Similarity=0.135 Sum_probs=55.2
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCch---HHHHHHHHHhCCCCCCcEEEEecC--C
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAK---SDFIEIMKEYAPKLPRKGVIHSFD--G 176 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~---~d~l~iLk~~~~~~~~~~v~H~Fs--G 176 (487)
+.|+|||=.|=.. ..++ ..|...++.|++.|+|+.+|+-... +.+.+.+...+. .-|=|++. .
T Consensus 180 ~~VvG~dL~g~E~---~~p~-----~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga----~RIgHG~~~~~ 247 (380)
T 4gxw_A 180 DEVAGIGIDYREN---DRPP-----ELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHV----DRVDHGYTIVD 247 (380)
T ss_dssp TTBCEEEEESCCT---TCCG-----GGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCC----SEEEECGGGGG
T ss_pred CCEEEEeecCCCC---CCCH-----HHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCC----cccccceeecc
Confidence 4588887655432 2222 2367777889999999999998742 455566644333 45778866 4
Q ss_pred CHHHHHHHHcCccchhHhhhcCCCceeecc
Q psy4448 177 TPFQAVDSLKTKENLETVKSIPEDRLLLET 206 (487)
Q Consensus 177 ~~~~a~~~l~~~~g~e~v~~iP~driLlET 206 (487)
+++.++.+.+. +. .+..+|..++.+.+
T Consensus 248 d~~L~~~l~~~--~I-~lEvCP~SN~~l~~ 274 (380)
T 4gxw_A 248 NPELCARYAER--GI-VFTVVPTNSYYLRT 274 (380)
T ss_dssp CHHHHHHHHHH--TC-EEEECTTCHHHHHH
T ss_pred ChHHHHHHHHh--Cc-eeEECCcchhhhcc
Confidence 67777776665 22 23455555554443
No 190
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=55.53 E-value=1.1e+02 Score=30.50 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=47.7
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc----h-HHHHHHHHHhCCCCCCcEEEEecCC
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA----K-SDFIEIMKEYAPKLPRKGVIHSFDG 176 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a----~-~d~l~iLk~~~~~~~~~~v~H~FsG 176 (487)
+.++++|=.|-.. . .+.|+..+++|+++|+|+.+|+-.. . ..+.+.+...+. ..+-||..-
T Consensus 200 ~~vvg~dl~g~e~-----~-----~~~~~~~~~~A~~~gl~~~~HagE~~~~~~~~~i~~al~~lg~----~ri~Hgv~l 265 (371)
T 2pgf_A 200 ADFVGFDHGGHEV-----D-----LKEYKEIFDYVRESGVPLSVHAGEDVTLPNLNTLYSAIQVLKV----ERIGHGIRV 265 (371)
T ss_dssp TTEEEEEEEESCC-----C-----GGGGHHHHHHHHHTTCCBEEEESCCTTSSSSHHHHHHHHTSCC----SEEEECGGG
T ss_pred CCEEEEecCCCcc-----c-----HHHHHHHHHHHHHcCCcEEEeeCCCCCCCchHHHHHHHhccCC----CEEecchhc
Confidence 4588887777431 1 3468888999999999999999765 2 455555543332 468999765
Q ss_pred CH--HHHHHHHcC
Q psy4448 177 TP--FQAVDSLKT 187 (487)
Q Consensus 177 ~~--~~a~~~l~~ 187 (487)
+. +.++.+.+.
T Consensus 266 ~~~~~l~~~l~~~ 278 (371)
T 2pgf_A 266 AESQELIDMVKEK 278 (371)
T ss_dssp GGCHHHHHHHHHT
T ss_pred cccHHHHHHHHHc
Confidence 43 335555554
No 191
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=55.21 E-value=7.3 Score=38.13 Aligned_cols=55 Identities=22% Similarity=0.256 Sum_probs=43.8
Q ss_pred HHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHH
Q psy4448 316 ETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPI 395 (487)
Q Consensus 316 e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~ 395 (487)
.+++.+|.||||++||.||..+ . . .| .+.+ +..+++.++..++
T Consensus 279 ~~~~~~g~drilfGSD~P~~~~--~-------------------------~---~~------~~~l-~~~~l~~~~~~~i 321 (334)
T 2hbv_A 279 LLVSVMGEDRVMLGSDYPFPLG--E-------------------------Q---KI------GGLV-LSSNLGESAKDKI 321 (334)
T ss_dssp HHHHHHCGGGEECCCCBTSTTS--C-------------------------S---ST------THHH-HTSSCCHHHHHHH
T ss_pred HHHHHhCcccEEEeCCCCCCCC--C-------------------------c---CH------hhHh-hhcCCCHHHHHHH
Confidence 5788999999999999998421 1 0 12 2445 6689999999999
Q ss_pred HHHHHHHhcCCC
Q psy4448 396 IHQNTLRLFFPH 407 (487)
Q Consensus 396 ~~~N~~rlf~~~ 407 (487)
++.|+.|||++.
T Consensus 322 ~~~NA~rl~~l~ 333 (334)
T 2hbv_A 322 ISGNASKFFNIN 333 (334)
T ss_dssp HTHHHHHHHTCC
T ss_pred HhHHHHHHhCCC
Confidence 999999999874
No 192
>2ics_A Adenine deaminase; TIM barrel, binuclear zinc, adenine complex, amidohydrolase, structural genomics, PSI, protein structure initiative; HET: KCX ADE; 2.30A {Enterococcus faecalis} SCOP: b.92.1.8 c.1.9.14
Probab=54.51 E-value=8.3 Score=37.76 Aligned_cols=121 Identities=13% Similarity=0.207 Sum_probs=76.8
Q ss_pred hHHHHHHHHHHhhh-CCCCEEEEecc---chHHHHHHHHHhCCCCCCCcEEEEeeCCc------------cccc------
Q psy4448 249 NIVYFRKQLDLSVT-HKLPLFLHCRN---AKSDFIEIMKEYAPKLPRKGVIHSFDGTP------------FQAV------ 306 (487)
Q Consensus 249 Q~~~F~~ql~lA~~-~~lPl~iH~r~---a~~~~l~il~~~~~~~~~~gv~hsfsG~~------------~~~~------ 306 (487)
+.+.|++++++|++ +++||.+|+.. +.++++++++.. ..+.|+|+|.. +...
T Consensus 166 ~~~~~~~~~~~a~~~~g~~v~~H~~~~~~~~~~~~~~~~~g------~~~~H~~~~~~~~~~~~s~~~~~~~~~~~~~~g 239 (379)
T 2ics_A 166 GITPLELAKQIQQENQEIPLMVHIGSAPPHLDEILALMEKG------DVLTHCFNGKENGILDQATDKIKDFAWQAYNKG 239 (379)
T ss_dssp TTHHHHHHHHHHHTTTTCCEEEEECSSSSCHHHHHHHCCTT------CEEESTTCCSTTSSEETTTTEECHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHhcCCeEEEeCCCCcchHHHHHHHhhcC------CeeeeccCCCccchhhccCHHHHHHHHHHHHcC
Confidence 45788899999999 99999999987 567777776431 24667776643 1110
Q ss_pred --ccc------cchh-hHHHhhh-CCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccc-cHH
Q psy4448 307 --DSL------KTKE-NLETVKS-IPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPA-NIV 375 (487)
Q Consensus 307 --~~~------k~~~-~~e~v~~-iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~-~l~ 375 (487)
+.+ .... ..++++. ++.+ +++||++.. +..+.|. .+.
T Consensus 240 ~~~~~~p~~~~~~~~~~~~~~~~G~~~~--~l~TD~~~~------------------------------~~~~~~~~~~~ 287 (379)
T 2ics_A 240 VVFDIGHGTDSFNFHVAETALREGMKAA--SISTDIYIR------------------------------NRENGPVYDLA 287 (379)
T ss_dssp CEEECCCTTTSCCHHHHHHHHHTTCCCS--BCCCCBCHH------------------------------HHHSSSCCCHH
T ss_pred CEEEecCCCCCcCHHHHHHHHHcCCCcc--eEeccCccc------------------------------CCCCCcHhHHH
Confidence 000 1111 2356666 5666 889998510 0001111 233
Q ss_pred HHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 376 QILEIVAAVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 376 ~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
..+..+.+ .+++++++.+.++.|..++|++..
T Consensus 288 ~~l~~~~~-~~ls~~~~~~~~T~n~A~~lgl~~ 319 (379)
T 2ics_A 288 TTMEKLRV-VGYDWPEIIEKVTKAPAENFHLTQ 319 (379)
T ss_dssp HHHHHHHH-HTCCHHHHHHTTTHHHHHHTTCTT
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHHHHHhCCCC
Confidence 33333322 489999999999999999999863
No 193
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=54.21 E-value=65 Score=32.03 Aligned_cols=47 Identities=6% Similarity=-0.043 Sum_probs=32.0
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCCCCcEEEEeeCC
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 301 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~ 301 (487)
..+.+++.++.|+++|+||.+|+... ..+.+.++- . ...+-|++..+
T Consensus 213 ~~e~l~~~~~~A~~~g~~v~~H~~~~-~~i~~al~~-G----~~~i~H~~~~~ 259 (426)
T 2r8c_A 213 SEDEIRAIVAEAQGRGTYVLAHAYTP-AAIARAVRC-G----VRTIEHGNLID 259 (426)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSH-HHHHHHHHT-T----CSEEEECTTCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEEeCCh-HHHHHHHHc-C----CCEEecCCcCC
Confidence 34568999999999999999999843 445555542 1 23456665443
No 194
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=54.00 E-value=58 Score=31.52 Aligned_cols=137 Identities=8% Similarity=-0.021 Sum_probs=78.5
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|- .. ..+.++. .+.+.
T Consensus 26 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~~-------t~~ai~l-a~~A~ 95 (294)
T 3b4u_A 26 MIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLV--DS-------IEDAADQ-SAEAL 95 (294)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECC--SS-------HHHHHHH-HHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCC--cc-------HHHHHHH-HHHHH
Confidence 446777778899999998886 466777777765543 23 5555552 11 2233433 33344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhC---CCCEEEEecC------chHHHH-HHHHHhCCCCCCc
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTH---KLPLFLHCRN------AKSDFI-EIMKEYAPKLPRK 168 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el---~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~ 168 (487)
+ -.+.|| =+--.||.. .. .|..+++..-++|... ++||+|...- -..+++ ++.++.+.. -
T Consensus 96 ~--~Gadav-lv~~P~y~~-~~---s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn~---i 165 (294)
T 3b4u_A 96 N--AGARNI-LLAPPSYFK-NV---SDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLKAAFPGI---V 165 (294)
T ss_dssp H--TTCSEE-EECCCCSSC-SC---CHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHHHHCTTT---E
T ss_pred h--cCCCEE-EEcCCcCCC-CC---CHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHHHhCCCc---E
Confidence 3 134444 234566541 01 4788888888889888 9999998732 122444 444354220 1
Q ss_pred EEEEecCCCHHHHHHHHc
Q psy4448 169 GVIHSFDGTPFQAVDSLK 186 (487)
Q Consensus 169 ~v~H~FsG~~~~a~~~l~ 186 (487)
.-+---+|+.....++++
T Consensus 166 vgiKds~gd~~~~~~~~~ 183 (294)
T 3b4u_A 166 TGVKDSSGNWSHTERLLK 183 (294)
T ss_dssp EEEEECCCCHHHHHHHHH
T ss_pred EEEEECCCCHHHHHHHHH
Confidence 223344677776666554
No 195
>2j6v_A UV endonuclease, UVDE; plasmid, TIM barrel, DNA repair, DNA binding protein, lyase; HET: KCX ALY; 1.55A {Thermus thermophilus} PDB: 3bzg_A 3c0s_A* 3c0l_A 3c0q_A* 3bzj_A
Probab=53.94 E-value=98 Score=30.05 Aligned_cols=24 Identities=13% Similarity=0.004 Sum_probs=17.1
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
.+-+++..++++++++++++|..-
T Consensus 102 ~~~~~~~~~~~~~~gi~i~~H~py 125 (301)
T 2j6v_A 102 EEELARLGALARAFGQRLSMHPGQ 125 (301)
T ss_dssp HHHHHHHHHHHHHTTCEEEECCCT
T ss_pred HHHHHHHHHHHHHcCCeEEEeCch
Confidence 355666677778888888888753
No 196
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=53.75 E-value=6.6 Score=42.46 Aligned_cols=124 Identities=10% Similarity=0.044 Sum_probs=90.0
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhCCCCC-------------CCcEEEEeeCCcccccccccch-
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLP-------------RKGVIHSFDGTPFQAVDSLKTK- 312 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~~~~~-------------~~gv~hsfsG~~~~~~~~~k~~- 312 (487)
..|.+.|.+++++|+++++||.+|++.+.++.++.+.+.....- ..|++++++|+ ..++.
T Consensus 198 ~~~d~~l~~~l~~A~~~g~pV~~Ha~~~~~~~L~~~~~aGv~~~H~~~~~eea~e~l~~G~~i~i~gs------~~~~~~ 271 (608)
T 3nqb_A 198 IERDPRMSGIVQAGLAAEKLVCGHARGLKNADLNAFMAAGVSSDHELVSGEDLMAKLRAGLTIELRGS------HDHLLP 271 (608)
T ss_dssp HTTCHHHHHHHHHHHHHTCEEEECCTTCCHHHHHHHHHTTCCEECCCCSHHHHHHHHHTTCEEEEESS------SGGGHH
T ss_pred CCCcHHHHHHHHHHHHcCCEEEEcCCCCCHHHHHHHHHcCCCeeeccCCHHHHHHHHHCCCEEEEecc------ccccHH
Confidence 34778899999999999999999999999998888776432110 25788888863 22222
Q ss_pred hhHHHhh--hCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHH
Q psy4448 313 ENLETVK--SIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVERE 390 (487)
Q Consensus 313 ~~~e~v~--~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~ 390 (487)
..+++++ ..+.+|++++||+-. +.+. .+. .++...++.+++. |++++
T Consensus 272 ~l~~~i~~~~~~g~~v~lgTD~~~--p~~~------------------------~~~----g~l~~~v~~~~~~-Gls~~ 320 (608)
T 3nqb_A 272 EFVAALNTLGHLPQTVTLCTDDVF--PDDL------------------------LQG----GGLDDVVRRLVRY-GLKPE 320 (608)
T ss_dssp HHHHHHHHHTSCCTTEEEECBSCC--HHHH------------------------HHT----CSHHHHHHHHHHT-TCCHH
T ss_pred HHHHHHHhHhhcCceEEEecCCCC--Ccch------------------------hhh----cchHHHHHHHHHc-CCCHH
Confidence 2346777 779999999999621 1100 011 2355666666664 99999
Q ss_pred HHHHHHHHHHHHhcCCC
Q psy4448 391 KLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 391 ~va~~~~~N~~rlf~~~ 407 (487)
++.+.++.|..++|++.
T Consensus 321 eal~~aT~n~A~~lgl~ 337 (608)
T 3nqb_A 321 WALRAATLNAAQRLGRS 337 (608)
T ss_dssp HHHHHHTHHHHHHHTCT
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 99999999999999985
No 197
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=53.47 E-value=1.4e+02 Score=27.68 Aligned_cols=133 Identities=11% Similarity=0.088 Sum_probs=73.3
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCC-HHhHHHHHHHHhcCCCeEEEeecCCCCCCCc-CCCc---hhhHHHHHHHHH---h
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTN-VEDSISSLKLAQSDERLYSTVGCHPTRCSEF-ENDP---EGYLQSLDKIIK---E 99 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~-~~~~~~~~~la~~~~~v~~avGiHP~~~~~~-~~~~---~~~l~~L~~ll~---~ 99 (487)
.++++.++.+++.|++.+=+.... ..+.+.+.+++++++--..++ |+.+.... ..+. +..++.+++.+. .
T Consensus 38 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~--~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~ 115 (287)
T 3kws_A 38 ESLNEKLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAI--CAGFKGFILSTDPAIRKECMDTMKEIIAAAGE 115 (287)
T ss_dssp SSHHHHHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEE--ECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEE--ecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 478999999999999866544442 456777777777765433222 33211111 0111 122333333332 2
Q ss_pred cCCCEEEEEeeCCCCCC--C--CCCChHHHHHHHHHHHHHhhhCCCCEEEEecC--------chHHHHHHHHHhCC
Q psy4448 100 GGKKVVAFGEFGLDYDR--V--QYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN--------AKSDFIEIMKEYAP 163 (487)
Q Consensus 100 ~~~~vvaIGEIGLD~~~--~--~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~--------a~~d~l~iLk~~~~ 163 (487)
-..+.+.+ -.|...+. . ....++.-.+.|++..++|+++|..+.||.-. ..+++++++++.+.
T Consensus 116 lGa~~v~~-~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~ 190 (287)
T 3kws_A 116 LGSTGVII-VPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINN 190 (287)
T ss_dssp TTCSEEEE-CSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCC
T ss_pred cCCCEEEE-ecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCC
Confidence 11233333 23433211 0 11123445677888889999999999999542 35678888888753
No 198
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=53.22 E-value=1.7e+02 Score=28.54 Aligned_cols=136 Identities=12% Similarity=0.139 Sum_probs=79.1
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ |+..+|-. . ..+.++.. +.+.
T Consensus 45 l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~--s-------t~~ai~la-~~A~ 114 (315)
T 3si9_A 45 FCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSN--S-------TSEAVELA-KHAE 114 (315)
T ss_dssp HHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCS--S-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCC--C-------HHHHHHHH-HHHH
Confidence 345677777899999998887 456666666654332 33 45555421 1 23334333 3343
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHH-hCCCCCCcEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKE-YAPKLPRKGVI 171 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~-~~~~~~~~~v~ 171 (487)
+ -.+.|| =+--.||. . . .|..+++..-++|...++||+|...- -.-+++.-|.+ .+. ..+|
T Consensus 115 ~--~Gadav-lv~~P~y~-~-~---~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---Ivgi- 182 (315)
T 3si9_A 115 K--AGADAV-LVVTPYYN-R-P---NQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDLCRDFKN---IIGV- 182 (315)
T ss_dssp H--TTCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEEE-
T ss_pred h--cCCCEE-EECCCCCC-C-C---CHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHHHhhCCC---EEEE-
Confidence 3 134444 23345654 1 2 37888888889999999999999742 12344444444 542 2233
Q ss_pred EecCCCHHHHHHHHcC
Q psy4448 172 HSFDGTPFQAVDSLKT 187 (487)
Q Consensus 172 H~FsG~~~~a~~~l~~ 187 (487)
---+|+.....++++.
T Consensus 183 Kdssgd~~~~~~l~~~ 198 (315)
T 3si9_A 183 KDATGKIERASEQREK 198 (315)
T ss_dssp EECSCCTHHHHHHHHH
T ss_pred EeCCCCHHHHHHHHHH
Confidence 3346887777766654
No 199
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=52.89 E-value=1.6e+02 Score=28.69 Aligned_cols=139 Identities=12% Similarity=0.088 Sum_probs=79.1
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+.+..+++...+.||..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++. .+.+.
T Consensus 28 ~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg~~~-------t~~ai~l-a~~A~ 99 (311)
T 3h5d_A 28 DAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVGTND-------TRDSIEF-VKEVA 99 (311)
T ss_dssp THHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECCCSS-------HHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcC-------HHHHHHH-HHHHH
Confidence 45667888888999999999887 466677777765432 3333334442211 2233433 33344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+- +-+.|| =+-..||. . . .|..+++..-++|...++||+|...- -.-+++.-|.+.+. ..+|=.
T Consensus 100 ~~-Ga~dav-lv~~P~y~-~-~---s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---IvgiKd 169 (311)
T 3h5d_A 100 EF-GGFAAG-LAIVPYYN-K-P---SQEGMYQHFKAIADASDLPIIIYNIPGRVVVELTPETMLRLADHPN---IIGVKE 169 (311)
T ss_dssp HS-CCCSEE-EEECCCSS-C-C---CHHHHHHHHHHHHHSCSSCEEEEECHHHHSSCCCHHHHHHHHTSTT---EEEEEE
T ss_pred hc-CCCcEE-EEcCCCCC-C-C---CHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHHhcCCC---EEEEEe
Confidence 31 111333 23455654 1 2 37888888889999999999998732 12344444444422 223333
Q ss_pred ecCCCHHHHHHHHc
Q psy4448 173 SFDGTPFQAVDSLK 186 (487)
Q Consensus 173 ~FsG~~~~a~~~l~ 186 (487)
-+ +.....++++
T Consensus 170 -ss-d~~~~~~~~~ 181 (311)
T 3h5d_A 170 -CT-SLANMAYLIE 181 (311)
T ss_dssp -CS-CHHHHHHHHH
T ss_pred -CC-CHHHHHHHHH
Confidence 23 7666665554
No 200
>2x7v_A Probable endonuclease 4; DNA repair protein, metal-binding, hydrolase, DNA damage, DN; 2.30A {Thermotoga maritima MSB8} PDB: 2x7w_A*
Probab=52.56 E-value=1.3e+02 Score=27.72 Aligned_cols=65 Identities=6% Similarity=0.050 Sum_probs=37.5
Q ss_pred HHHHHHHHHHHHHhhhCCCCEE-EEecC--------chHHHHHHHHHhCCC-CCCcEEEEecC-------CCHHHHHHHH
Q psy4448 123 ETQLKYFRKQLDLSVTHKLPLF-LHCRN--------AKSDFIEIMKEYAPK-LPRKGVIHSFD-------GTPFQAVDSL 185 (487)
Q Consensus 123 e~Q~~vF~~qL~LA~el~lPVi-IH~r~--------a~~d~l~iLk~~~~~-~~~~~v~H~Fs-------G~~~~a~~~l 185 (487)
+...+.|++.+++|.+++.+.+ +|.-. +.+.+.+.|++.... ...+..+|.-. .+.+.+.+++
T Consensus 85 ~~~~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~ 164 (287)
T 2x7v_A 85 QKSVELLKKEVEICRKLGIRYLNIHPGSHLGTGEEEGIDRIVRGLNEVLNNTEGVVILLENVSQKGGNIGYKLEQLKKIR 164 (287)
T ss_dssp HHHHHHHHHHHHHHHHHTCCEEEECCEECTTSCHHHHHHHHHHHHHHHHTTCCSCEEEEECCCCCTTEECSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecCCCCCCCHHHHHHHHHHHHHHHHcccCCCEEEEeCCCCCCCccCCCHHHHHHHH
Confidence 4567789999999999998855 67532 123344445443211 12356665432 3566666655
Q ss_pred cC
Q psy4448 186 KT 187 (487)
Q Consensus 186 ~~ 187 (487)
+.
T Consensus 165 ~~ 166 (287)
T 2x7v_A 165 DL 166 (287)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 201
>3neh_A Renal dipeptidase family protein; structural genomics, nysgrc, dipeptide L-Leu-D-Ala, PSI-2, P structure initiative; HET: L3A; 1.64A {Listeria monocytogenes} PDB: 3lu2_A
Probab=52.12 E-value=52 Score=32.56 Aligned_cols=103 Identities=15% Similarity=0.088 Sum_probs=67.5
Q ss_pred EeccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccc----cccccc-hhhH-HHhhhCCCCceEeccCCCCCCCCCCCcc
Q psy4448 270 HCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA----VDSLKT-KENL-ETVKSIPEDRLLLETDCPWCEVKPSHAG 343 (487)
Q Consensus 270 H~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~----~~~~k~-~~~~-e~v~~iPldrlLlETD~P~~~~~p~~~~ 343 (487)
|.|+--++.++.|.+.. =++++|...... ..++.. -+.. -+++.+..|.+=|=||---....|
T Consensus 203 h~RNl~D~~l~ala~~G-------Gvigv~~~~~fl~~~~~~tl~~~~~Hi~hi~~l~G~dhVgiGsDfDG~~~~p---- 271 (318)
T 3neh_A 203 HPRNLDDEQIKAMIEHD-------AMIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHV---- 271 (318)
T ss_dssp CTTSBCHHHHHHHHHTT-------CEEEECCCHHHHCTTSCCBHHHHHHHHHHHHHTTCGGGEEECCCBTSCSSCB----
T ss_pred CCCCCCHHHHHHHHHcC-------CEEEEEeeHHhhCCCCCCCHHHHHHHHHHHHHhcCCCeEEECCCCCCCCCCC----
Confidence 56888899999999853 255665421100 011100 0122 366778999999999973321111
Q ss_pred hhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 344 FAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 344 ~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+-..++.++.+.+.+.+ |.+.+++..+++.|+.|+|.-.
T Consensus 272 ----------------------~gl~d~s~~p~L~~~L~~--g~se~~i~ki~g~N~lRv~~~~ 311 (318)
T 3neh_A 272 ----------------------KGLEHVGKYQSFLETLEK--HYTKEEIEGFASRNFLNHLPKE 311 (318)
T ss_dssp ----------------------BTBSSGGGHHHHHHHHTT--TSCHHHHHHHHTHHHHHTCCC-
T ss_pred ----------------------CCCCCHHHHHHHHHHHHh--cCCHHHHHHHHhHhHHHHHhhh
Confidence 223456778888888877 9999999999999999999643
No 202
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=51.97 E-value=25 Score=32.54 Aligned_cols=135 Identities=8% Similarity=0.008 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC--CHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHh---cCC
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT--NVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKE---GGK 102 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~--~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~---~~~ 102 (487)
.++++.++.+++.|++.+=+... +..+.+.+.++.++++--..+++.+|..........+..++.+++.+.. -..
T Consensus 18 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~i~~a~~lG~ 97 (275)
T 3qc0_A 18 CGFAEAVDICLKHGITAIAPWRDQVAAIGLGEAGRIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRAVDEAAELGA 97 (275)
T ss_dssp CCHHHHHHHHHHTTCCEEECBHHHHHHHCHHHHHHHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccccCHHHHHHHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHHHHHHHHhCC
Confidence 58899999999999986543321 2334455556666654322233323332211000011223344443322 111
Q ss_pred CEEEEEeeCCCCC-CCC-CCChHHHHHHHHHHHHHhhhCCCCEEEEecC-----------chHHHHHHHHHhCC
Q psy4448 103 KVVAFGEFGLDYD-RVQ-YCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-----------AKSDFIEIMKEYAP 163 (487)
Q Consensus 103 ~vvaIGEIGLD~~-~~~-~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-----------a~~d~l~iLk~~~~ 163 (487)
+.+.+. .|-... ... ...++.-.+.|++..++|+++|..+.||... ..+++.+++++.+.
T Consensus 98 ~~v~~~-~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 170 (275)
T 3qc0_A 98 DCLVLV-AGGLPGGSKNIDAARRMVVEGIAAVLPHARAAGVPLAIEPLHPMYAADRACVNTLGQALDICETLGP 170 (275)
T ss_dssp SCEEEE-CBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHTCCEEECCCCGGGTTTTBSCCCHHHHHHHHHHHCT
T ss_pred CEEEEe-eCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHcCCEEEEeECCCcccCCccccCCHHHHHHHHHHhCc
Confidence 223332 332110 000 0113344567888888999999999999632 34677788877754
No 203
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=51.67 E-value=1.4e+02 Score=29.53 Aligned_cols=27 Identities=11% Similarity=0.134 Sum_probs=24.2
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHH
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSD 277 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~ 277 (487)
+.+++.+++|+++|+|+.+|+-....+
T Consensus 219 ~~l~~~~~~a~~~g~~v~~H~~e~~~~ 245 (456)
T 3ls9_A 219 ELFEAFAQMAADYDVRLHTHFYEPLDA 245 (456)
T ss_dssp HHHHHHHHHHHHHTCEEEEEECCTTHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeCCCchH
Confidence 578899999999999999999887766
No 204
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=51.50 E-value=1.4e+02 Score=27.17 Aligned_cols=125 Identities=10% Similarity=0.029 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCC-------HHhHHHHHHHHhcCCCeEEEeec-CCCCCCCcCCCchhhHHHHHHHHH-
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTN-------VEDSISSLKLAQSDERLYSTVGC-HPTRCSEFENDPEGYLQSLDKIIK- 98 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~-------~~~~~~~~~la~~~~~v~~avGi-HP~~~~~~~~~~~~~l~~L~~ll~- 98 (487)
.++++.++.+.+.|++.+=+.... ..+...+.+++++++--..+++. .|... . .++..+.+++.+.
T Consensus 19 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~--~---~~~~~~~~~~~i~~ 93 (272)
T 2q02_A 19 LSIEAFFRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQ--L---TEEVVKKTEGLLRD 93 (272)
T ss_dssp SCHHHHHHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTS--C---CHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCC--c---HHHHHHHHHHHHHH
Confidence 478999999999999876554321 23455666666666543333322 12111 1 1222333333332
Q ss_pred --hcCCCEEEEEeeCCCCCCCCCCChHHH-HHHHHHHHHHhhhCCCCEEEEecC-------chHHHHHHHHHhC
Q psy4448 99 --EGGKKVVAFGEFGLDYDRVQYCPVETQ-LKYFRKQLDLSVTHKLPLFLHCRN-------AKSDFIEIMKEYA 162 (487)
Q Consensus 99 --~~~~~vvaIGEIGLD~~~~~~~~~e~Q-~~vF~~qL~LA~el~lPViIH~r~-------a~~d~l~iLk~~~ 162 (487)
.-..+.+.+ -.|.+. ...++.- .+.|++..++|+++|+.+.||... ..+++++++++.+
T Consensus 94 a~~lG~~~v~~-~~g~~~----~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~ 162 (272)
T 2q02_A 94 AQGVGARALVL-CPLNDG----TIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG 162 (272)
T ss_dssp HHHHTCSEEEE-CCCCSS----BCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT
T ss_pred HHHhCCCEEEE-ccCCCc----hhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC
Confidence 111123322 123221 1334666 788889999999999988888753 3567788888775
No 205
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=51.13 E-value=1.2e+02 Score=27.80 Aligned_cols=135 Identities=11% Similarity=-0.029 Sum_probs=69.2
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCC------HHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHH---
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGTN------VEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKII--- 97 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~~------~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll--- 97 (487)
..++++.++.+.+.|++.+=+.... ..+.+.+.++.++++--..+++......... ......++.+++.+
T Consensus 15 ~~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~i~~A 93 (281)
T 3u0h_A 15 ETSLVLYLDLARETGYRYVDVPFHWLEAEAERHGDAAVEAMFQRRGLVLANLGLPLNLYDSE-PVFLRELSLLPDRARLC 93 (281)
T ss_dssp CCCHHHHHHHHHHTTCSEECCCHHHHHHHHHHHCHHHHHHHHHTTTCEECCEECCSCTTSCH-HHHHHHHHTHHHHHHHH
T ss_pred CCCHHHHHHHHHHcCCCEEEecHHHHHHHhcccCHHHHHHHHHHcCCceEEecccccccCCC-HHHHHHHHHHHHHHHHH
Confidence 3588999999999999865333322 2334555666666653333333221111100 00011122333333
Q ss_pred HhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-------------chHHHHHHHHHhCC
Q psy4448 98 KEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-------------AKSDFIEIMKEYAP 163 (487)
Q Consensus 98 ~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-------------a~~d~l~iLk~~~~ 163 (487)
..-.-+.+.+| ++-.........++.-.+.|++..+.|+++|+.+.||.-. ..+++.+++++.+.
T Consensus 94 ~~lG~~~v~~~-~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~~~~~~l~~~v~~ 171 (281)
T 3u0h_A 94 ARLGARSVTAF-LWPSMDEEPVRYISQLARRIRQVAVELLPLGMRVGLEYVGPHHLRHRRYPFVQSLADLKTFWEAIGA 171 (281)
T ss_dssp HHTTCCEEEEE-CCSEESSCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCGGGCCSSEECCCSHHHHHHHHHHHCC
T ss_pred HHcCCCEEEEe-ecCCCCCcchhhHHHHHHHHHHHHHHHHHcCCEEEEEeccccccccccccccCCHHHHHHHHHHcCC
Confidence 22112233322 1111000000123345577888889999999999999652 45678888888753
No 206
>2vhl_A N-acetylglucosamine-6-phosphate deacetylase; N- acetyleglucosamine-6-phosphate, carbohydrate metabolism, hydrolase; HET: GLP PGE; 2.05A {Bacillus subtilis}
Probab=51.04 E-value=70 Score=31.43 Aligned_cols=29 Identities=7% Similarity=0.029 Sum_probs=23.3
Q ss_pred HHHHHhhhCCCCEEE-EeccchHHHHHHHH
Q psy4448 255 KQLDLSVTHKLPLFL-HCRNAKSDFIEIMK 283 (487)
Q Consensus 255 ~ql~lA~~~~lPl~i-H~r~a~~~~l~il~ 283 (487)
+.++.|+++|+|+.+ |+.....++...++
T Consensus 186 ~~~~~a~~~g~~v~~gH~~~~~~~~~~a~~ 215 (396)
T 2vhl_A 186 ELIRHLKDESIIASMGHTDADSALLSDAAK 215 (396)
T ss_dssp HHHHHHHHTTCEEEECSBCCCHHHHHHHHH
T ss_pred HHHHHHHHCCCEEeecccCCCHHHHHHHHH
Confidence 346789999999999 99877777776665
No 207
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=50.99 E-value=1e+02 Score=29.65 Aligned_cols=136 Identities=12% Similarity=0.149 Sum_probs=75.7
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+...++...+.||..+++.|+ +.++..++++.+.+. ++ ++..+|-. . ..+.++. .+.+.
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~--~-------t~~ai~l-a~~a~ 93 (292)
T 2ojp_A 24 LKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTGAN--A-------TAEAISL-TQRFN 93 (292)
T ss_dssp HHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCS--S-------HHHHHHH-HHHTT
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCc--c-------HHHHHHH-HHHHH
Confidence 446777777899999998886 456666666654332 33 44444421 1 1233322 22333
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHhCCCCCCcEEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+ -.+.|| =+--.||. . ..|..+++..-++|...++||+|...- -.-+++.-|.+.+. .-+ +-
T Consensus 94 ~--~Gadav-lv~~P~y~-~----~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~pn---ivg-iK 161 (292)
T 2ojp_A 94 D--SGIVGC-LTVTPYYN-R----PSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRLAKVKN---IIG-IX 161 (292)
T ss_dssp T--SSCSEE-EEECCCSS-C----CCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHHHTSTT---EEE-C-
T ss_pred h--cCCCEE-EECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHHHcCCC---EEE-Ee
Confidence 2 123333 23345554 1 247888888889999999999998742 12344443434321 112 23
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 162 ~s~gd~~~~~~~~~~ 176 (292)
T 2ojp_A 162 EATGNLTRVNQIKEL 176 (292)
T ss_dssp CCSCCTHHHHHHHTT
T ss_pred CCCCCHHHHHHHHHh
Confidence 345777776666654
No 208
>4aql_A Guanine deaminase; hydrolase, purine metabolism; HET: TXC; 1.99A {Homo sapiens} PDB: 2uz9_A* 3e0l_A
Probab=50.36 E-value=1.8e+02 Score=29.67 Aligned_cols=35 Identities=11% Similarity=0.201 Sum_probs=29.0
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHh
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 285 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~ 285 (487)
+.+++-.++|+++|+|+.+|+-...+++-.+++.+
T Consensus 243 e~l~~~~~~A~~~g~~v~~H~~e~~~e~~~~~~~~ 277 (476)
T 4aql_A 243 TLMGELGNIAKTRDLHIQSHISENRDEVEAVKNLY 277 (476)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCSHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCceEEEecCCHHHHHHHHHHh
Confidence 56788899999999999999988887776666544
No 209
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=48.75 E-value=2e+02 Score=27.96 Aligned_cols=138 Identities=10% Similarity=-0.017 Sum_probs=79.3
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhc-CCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQS-DERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG 101 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~-~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~ 101 (487)
+..+++...++||..+++.|+ +.++..++++.+.+ .+++-.-+|+=-.. ..+.++..+ .+.+-
T Consensus 31 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~-------t~~ai~la~-~A~~~- 101 (313)
T 3dz1_A 31 IDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPG-------FAAMRRLAR-LSMDA- 101 (313)
T ss_dssp HHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSS-------HHHHHHHHH-HHHHH-
T ss_pred HHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCC-------HHHHHHHHH-HHHHc-
Confidence 445777778899999998876 46666677665432 24544444542111 233344333 33331
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCC--CCEEEEecC------chHHHHHHH-HHhCCCCCCcEEEE
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHK--LPLFLHCRN------AKSDFIEIM-KEYAPKLPRKGVIH 172 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~--lPViIH~r~------a~~d~l~iL-k~~~~~~~~~~v~H 172 (487)
.+.|+ =+-..|++ ..|..+++..-++|...+ +||+|...- -.-+++.-| ++.+. .-+|=.
T Consensus 102 -Gadav-lv~~P~~~------~s~~~l~~~f~~va~a~~~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---IvgiKd 170 (313)
T 3dz1_A 102 -GAAGV-MIAPPPSL------RTDEQITTYFRQATEAIGDDVPWVLQDYPLTLSVVMTPKVIRQIVMDSAS---CVMLKH 170 (313)
T ss_dssp -TCSEE-EECCCTTC------CSHHHHHHHHHHHHHHHCTTSCEEEEECHHHHCCCCCHHHHHHHHHHCSS---EEEEEE
T ss_pred -CCCEE-EECCCCCC------CCHHHHHHHHHHHHHhCCCCCcEEEEeCccccCcCCCHHHHHHHHHhCCC---EEEEEc
Confidence 23333 23344533 248889999999999888 999997642 123555544 44543 234444
Q ss_pred ecCCCHHHHHHHHcC
Q psy4448 173 SFDGTPFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~~~~a~~~l~~ 187 (487)
.-+|+...+.++++.
T Consensus 171 ~~~~~~~~~~~~~~~ 185 (313)
T 3dz1_A 171 EDWPGLEKITTLRGF 185 (313)
T ss_dssp CCSSCHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHh
Confidence 346777777666543
No 210
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=48.73 E-value=2e+02 Score=27.90 Aligned_cols=138 Identities=14% Similarity=0.108 Sum_probs=78.1
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++..+. +.+-
T Consensus 35 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~s-------t~~ai~la~~-A~~~ 106 (306)
T 1o5k_A 35 YERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNS-------TEKTLKLVKQ-AEKL 106 (306)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSC-------HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCcc-------HHHHHHHHHH-HHhc
Confidence 445777778899999998876 466676776664432 3333334442211 2233433333 3331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHH-HHHHHhCCCCCCcEEEEe
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFI-EIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~~v~H~ 173 (487)
.+.||= +--.||. . ..|..+++..-++|...++||+|...- -..+++ ++.++.+. .-+ +--
T Consensus 107 --Gadavl-v~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---Ivg-iKd 174 (306)
T 1o5k_A 107 --GANGVL-VVTPYYN-K----PTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIAADLKN---VVG-IXE 174 (306)
T ss_dssp --TCSEEE-EECCCSS-C----CCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEE-EEE
T ss_pred --CCCEEE-ECCCCCC-C----CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHHhCCC---EEE-EeC
Confidence 233332 2345554 1 247888888889999999999998732 122444 44435432 123 334
Q ss_pred cCCCHHHHHHHHcC
Q psy4448 174 FDGTPFQAVDSLKT 187 (487)
Q Consensus 174 FsG~~~~a~~~l~~ 187 (487)
-+|+.....++++.
T Consensus 175 ssgd~~~~~~~~~~ 188 (306)
T 1o5k_A 175 ANPDIDQIDRTVSL 188 (306)
T ss_dssp CCCCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh
Confidence 55888777766643
No 211
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=48.57 E-value=1.9e+02 Score=27.73 Aligned_cols=138 Identities=13% Similarity=0.127 Sum_probs=78.8
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++.. +.+.+
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~-------t~~ai~la-~~A~~- 93 (294)
T 2ehh_A 23 LGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNA-------THEAVHLT-AHAKE- 93 (294)
T ss_dssp HHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSC-------HHHHHHHH-HHHHH-
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC-------HHHHHHHH-HHHHh-
Confidence 456777788899999998886 456666666654432 3433344442211 22334333 33333
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHH-HHHHHhCCCCCCcEEEEe
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFI-EIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~~v~H~ 173 (487)
-.+.||= +--.||. . ..|..+++..-++|...++||+|...- -..+++ ++.++.+. .-+ +--
T Consensus 94 -~Gadavl-v~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---ivg-iKd 162 (294)
T 2ehh_A 94 -VGADGAL-VVVPYYN-K----PTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLASECEN---IVA-SKE 162 (294)
T ss_dssp -TTCSEEE-EECCCSS-C----CCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEE-EEE
T ss_pred -cCCCEEE-ECCCCCC-C----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHHhhCCC---EEE-EEe
Confidence 1333442 3355654 1 247888888888999999999998732 123444 44435532 122 344
Q ss_pred cCCCHHHHHHHHcC
Q psy4448 174 FDGTPFQAVDSLKT 187 (487)
Q Consensus 174 FsG~~~~a~~~l~~ 187 (487)
-+|+.....++++.
T Consensus 163 s~gd~~~~~~~~~~ 176 (294)
T 2ehh_A 163 STPNMDRISEIVKR 176 (294)
T ss_dssp CCSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHh
Confidence 56887777666543
No 212
>1tz9_A Mannonate dehydratase; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium; 2.90A {Enterococcus faecalis} SCOP: c.1.15.6
Probab=48.27 E-value=63 Score=31.93 Aligned_cols=39 Identities=10% Similarity=0.016 Sum_probs=25.6
Q ss_pred CHHHHHHHHHhc-CCCEEEEEC--------CCHHhHHHHHHHHhcCCC
Q psy4448 29 DIDHVLNRAWNA-GLEKIIVTG--------TNVEDSISSLKLAQSDER 67 (487)
Q Consensus 29 d~~~vl~ra~~~-GV~~ii~v~--------~~~~~~~~~~~la~~~~~ 67 (487)
+.+..++.+++. |++.+.+.. .+.++...+.+++++++-
T Consensus 22 ~~~~~L~~i~~~~G~~~ve~~~~~~~~g~~~~~~~~~~~~~~l~~~GL 69 (367)
T 1tz9_A 22 GDAIPLKHIRQIPGITGVVGTLLNKLPGDVWTVAEIQALKQSVEQEGL 69 (367)
T ss_dssp TCCSCHHHHTTSTTCCEEEECCSSSCTTCCCCHHHHHHHHHHHHHTTC
T ss_pred CChHHHHHHhhcCCCCeEEecCCCCCCCCCCCHHHHHHHHHHHHHCCC
Confidence 345568899999 999876531 133466667777777653
No 213
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=47.94 E-value=1.4e+02 Score=30.10 Aligned_cols=39 Identities=8% Similarity=0.123 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHhhhCCCCEEEEe-------------cCchHHHHHHHHHhCC
Q psy4448 125 QLKYFRKQLDLSVTHKLPLFLHC-------------RNAKSDFIEIMKEYAP 163 (487)
Q Consensus 125 Q~~vF~~qL~LA~el~lPViIH~-------------r~a~~d~l~iLk~~~~ 163 (487)
=.+.+++.+..|.++|..+.||- ....+++..+++....
T Consensus 198 l~~~L~~i~~~Aee~GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vds 249 (386)
T 3bdk_A 198 LEYFIKAILPTAEEAGVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDS 249 (386)
T ss_dssp HHHHHHHHHHHHHSSSCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHhCCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcCC
Confidence 34668888999999999999995 4567788888887754
No 214
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=47.60 E-value=88 Score=30.65 Aligned_cols=23 Identities=17% Similarity=0.562 Sum_probs=14.0
Q ss_pred CHHHHHHHHHhcCCCEEEEECCC
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGTN 51 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~~ 51 (487)
.+++.|..+.++||+.++++..|
T Consensus 98 ~l~~~L~~~~~~GI~nILaLrGD 120 (304)
T 3fst_A 98 ELRTIARDYWNNGIRHIVALRGD 120 (304)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEecCC
Confidence 44555666666666666666544
No 215
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=46.75 E-value=2e+02 Score=27.51 Aligned_cols=135 Identities=10% Similarity=0.146 Sum_probs=77.3
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
+..+++...+.|+..+++.|+ +.++..++++.+.+. ++ ++..+|- .. ..+.++. .+.+.
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~--~~-------t~~ai~l-a~~A~ 92 (292)
T 2vc6_A 23 LHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAGS--NS-------TAEAIAF-VRHAQ 92 (292)
T ss_dssp HHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCC--SS-------HHHHHHH-HHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCC--cc-------HHHHHHH-HHHHH
Confidence 456777788899999988876 466666666654332 23 5555552 11 2233333 33344
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHH-HHHHHhCCCCCCcEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFI-EIMKEYAPKLPRKGVI 171 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l-~iLk~~~~~~~~~~v~ 171 (487)
+ -.+.|| =+--.||. . ..|..+++..-++|...++||+|+..- -..+++ ++.++.+. ..+|=
T Consensus 93 ~--~Gadav-lv~~P~y~-~----~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---IvgiK 161 (292)
T 2vc6_A 93 N--AGADGV-LIVSPYYN-K----PTQEGIYQHFKAIDAASTIPIIVYNIPGRSAIEIHVETLARIFEDCPN---VKGVX 161 (292)
T ss_dssp H--TTCSEE-EEECCCSS-C----CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEEEE
T ss_pred H--cCCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHHhhCCC---EEEEe
Confidence 3 133444 23345554 1 247888888888899999999997632 223444 44432532 22333
Q ss_pred EecCCCHHHHHHHHc
Q psy4448 172 HSFDGTPFQAVDSLK 186 (487)
Q Consensus 172 H~FsG~~~~a~~~l~ 186 (487)
. -+|+.....++++
T Consensus 162 ~-s~gd~~~~~~~~~ 175 (292)
T 2vc6_A 162 D-ATGNLLRPSLERM 175 (292)
T ss_dssp E-CSCCTHHHHHHHH
T ss_pred c-CCCCHHHHHHHHH
Confidence 3 5677776666554
No 216
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=46.55 E-value=1.4e+02 Score=27.67 Aligned_cols=48 Identities=8% Similarity=-0.027 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC-----CHHhHHHHHHHHhcCCCeEEEeecC
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT-----NVEDSISSLKLAQSDERLYSTVGCH 75 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~-----~~~~~~~~~~la~~~~~v~~avGiH 75 (487)
.++++.++.+.+.|++.+=+... +..+.+.+.+++++++--..+++.|
T Consensus 21 ~~l~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~ 73 (290)
T 3tva_A 21 AGLGVHLEVAQDLKVPTVQVHAPHPHTRTREHAQAFRAKCDAAGIQVTVIFGG 73 (290)
T ss_dssp SSSSBCHHHHHHTTCSEEEEECCCGGGCSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHcCCCEEEecCCCCCcCCHHHHHHHHHHHHHcCCEEEEEeec
Confidence 35566778888888876644432 2344555555666655444444444
No 217
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=45.95 E-value=1.9e+02 Score=27.05 Aligned_cols=125 Identities=13% Similarity=0.098 Sum_probs=63.4
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCH-------HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHH---
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTNV-------EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKII--- 97 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~~-------~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll--- 97 (487)
.++++.++.+.+.|.+.+=+....+ .+.+.+.+++++++--..+++. +...........+.++.+++.+
T Consensus 36 ~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~A 114 (296)
T 2g0w_A 36 VSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEY-ITQWGTAEDRTAEQQKKEQTTFHMA 114 (296)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEEC-BCCCSSTTTCCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehh-hhccccCChHHHHHHHHHHHHHHHH
Confidence 5889999999999998764433211 2334455555555533333322 1111000000011122232222
Q ss_pred HhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEec-----CchHHHHHHHHHhC
Q psy4448 98 KEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCR-----NAKSDFIEIMKEYA 162 (487)
Q Consensus 98 ~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r-----~a~~d~l~iLk~~~ 162 (487)
..-.-+.+.+|-. + . .+.+.-.+.|++..+.| +|+.+.||.. ...+++++++++..
T Consensus 115 ~~lGa~~v~~g~~--~----~-~~~~~~~~~l~~l~~~a--~Gv~l~lE~~~~~~~~~~~~~~~l~~~v~ 175 (296)
T 2g0w_A 115 RLFGVKHINCGLL--E----K-IPEEQIIVALGELCDRA--EELIIGLEFMPYSGVADLQAAWRVAEACG 175 (296)
T ss_dssp HHHTCCEEEECCC--S----C-CCHHHHHHHHHHHHHHH--TTSEEEEECCTTSSSCSHHHHHHHHHHHT
T ss_pred HHcCCCEEEEcCC--C----C-CCHHHHHHHHHHHHHHh--cCCEEEEEecCCCCCCCHHHHHHHHHHhC
Confidence 1111233444422 1 1 12566677788888888 7888888864 24567777777764
No 218
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=45.46 E-value=2.2e+02 Score=27.51 Aligned_cols=137 Identities=10% Similarity=0.084 Sum_probs=76.9
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. +++-..+|+=-.. ..+.++..+. +.+-
T Consensus 34 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~-------t~~ai~la~~-A~~~ 105 (303)
T 2wkj_A 34 LRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVS-------TAESQQLAAS-AKRY 105 (303)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSS-------HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCC-------HHHHHHHHHH-HHhC
Confidence 445777778899999999886 466666776664432 3444444442211 2233433333 3331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCC-CCEEEEecC------chHHHHHHHHHhCCCCCCcEEEEe
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHK-LPLFLHCRN------AKSDFIEIMKEYAPKLPRKGVIHS 173 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~-lPViIH~r~------a~~d~l~iLk~~~~~~~~~~v~H~ 173 (487)
.+.||= +--.||. . . .|..+++..-++|...+ +||+|...- -..+++.-|.+.+. -+-+--
T Consensus 106 --Gadavl-v~~P~y~-~-~---s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~La~~pn----IvgiK~ 173 (303)
T 2wkj_A 106 --GFDAVS-AVTPFYY-P-F---SFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTLVTLPG----VGALXQ 173 (303)
T ss_dssp --TCSEEE-EECCCSS-C-C---CHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHHHTSTT----EEEEEE
T ss_pred --CCCEEE-ecCCCCC-C-C---CHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHHhcCCC----EEEEeC
Confidence 233332 2345554 1 2 47788888888888888 999998732 12244444434322 223344
Q ss_pred cCCCHHHHHHHHc
Q psy4448 174 FDGTPFQAVDSLK 186 (487)
Q Consensus 174 FsG~~~~a~~~l~ 186 (487)
-+|+.....++++
T Consensus 174 s~gd~~~~~~~~~ 186 (303)
T 2wkj_A 174 TSGDLYQMEQIRR 186 (303)
T ss_dssp CCCCHHHHHHHHH
T ss_pred CCCCHHHHHHHHH
Confidence 5678777766654
No 219
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=45.45 E-value=1.3e+02 Score=28.00 Aligned_cols=132 Identities=11% Similarity=0.108 Sum_probs=73.0
Q ss_pred CCHHHHHHHHHhcCCCEEEEEC-----CCHHhHHHHHHHHhcCCCeEEE-eecCCCCCCCcCCCch---hhHHHHHHHHH
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTG-----TNVEDSISSLKLAQSDERLYST-VGCHPTRCSEFENDPE---GYLQSLDKIIK 98 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~-----~~~~~~~~~~~la~~~~~v~~a-vGiHP~~~~~~~~~~~---~~l~~L~~ll~ 98 (487)
.++++.++.+.+.|++.+=+.. .+..+.+.+.+++++++--..+ .|..+ ...-...+.+ ..++.+++.+.
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~-~~~l~~~d~~~r~~~~~~~~~~i~ 95 (294)
T 3vni_A 17 ADYKYYIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSA-EQNLSSPDPDIRKNAKAFYTDLLK 95 (294)
T ss_dssp CCHHHHHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCG-GGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCC-CcCCCCCCHHHHHHHHHHHHHHHH
Confidence 5799999999999999775553 2456677777777777642322 33221 1110001111 12333333332
Q ss_pred ---hcCCCEEEEEee--CC--CCCCCCCCC----hHHHHHHHHHHHHHhhhCCCCEEEEecC--------chHHHHHHHH
Q psy4448 99 ---EGGKKVVAFGEF--GL--DYDRVQYCP----VETQLKYFRKQLDLSVTHKLPLFLHCRN--------AKSDFIEIMK 159 (487)
Q Consensus 99 ---~~~~~vvaIGEI--GL--D~~~~~~~~----~e~Q~~vF~~qL~LA~el~lPViIH~r~--------a~~d~l~iLk 159 (487)
.-..+.+.+ -+ |. ++. ...+ ++.-.+.|++..+.|+++|..+.||.-. ..+++.++++
T Consensus 96 ~a~~lG~~~v~~-~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lEn~~~~~~~~~~~~~~~~~l~~ 172 (294)
T 3vni_A 96 RLYKLDVHLIGG-ALYSYWPIDYT--KTIDKKGDWERSVESVREVAKVAEACGVDFCLEVLNRFENYLINTAQEGVDFVK 172 (294)
T ss_dssp HHHHHTCCEEEE-STTSCSSCCTT--SCCCHHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHH
T ss_pred HHHHhCCCeeec-cccCCCCCcCC--CCCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHH
Confidence 111122221 11 11 221 1112 3445667888888999999999999753 3567888888
Q ss_pred HhCC
Q psy4448 160 EYAP 163 (487)
Q Consensus 160 ~~~~ 163 (487)
+.+.
T Consensus 173 ~v~~ 176 (294)
T 3vni_A 173 QVDH 176 (294)
T ss_dssp HHCC
T ss_pred HcCC
Confidence 7753
No 220
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=44.90 E-value=2.2e+02 Score=27.42 Aligned_cols=59 Identities=12% Similarity=0.173 Sum_probs=29.2
Q ss_pred hhHHHHHHHHHhcCCCEEEEEeeCCCCCCCC--CCChHHHHHHHHHHHHHh-hhCCCCEEEEecCc
Q psy4448 88 GYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQ--YCPVETQLKYFRKQLDLS-VTHKLPLFLHCRNA 150 (487)
Q Consensus 88 ~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~--~~~~e~Q~~vF~~qL~LA-~el~lPViIH~r~a 150 (487)
..++..++++++. -.++=|| -.-.+.. ..+.+.+.+-+...++.. .+.+.||+|++.++
T Consensus 39 ~a~~~a~~~v~~G-AdiIDIG---gestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSIDT~~~ 100 (282)
T 1aj0_A 39 DAVKHANLMINAG-ATIIDVG---GESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISVDTSKP 100 (282)
T ss_dssp HHHHHHHHHHHHT-CSEEEEE---SSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEECCCH
T ss_pred HHHHHHHHHHHCC-CCEEEEC---CCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEEeCCCH
Confidence 3445556666653 2344343 3222211 122344444455555444 44588888888773
No 221
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=43.33 E-value=2e+02 Score=26.56 Aligned_cols=141 Identities=14% Similarity=0.109 Sum_probs=73.5
Q ss_pred HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeC---CCCC----------CCCC
Q psy4448 53 EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFG---LDYD----------RVQY 119 (487)
Q Consensus 53 ~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIG---LD~~----------~~~~ 119 (487)
.+++..++.+++.+. -++-+.++..... .+..++.+.+.+.++.=++.+++ ++ -.|. ..+.
T Consensus 21 ~~l~~~l~~~~~~G~--~~vEl~~~~~~~~---~~~~~~~~~~~l~~~gl~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~ 94 (290)
T 3tva_A 21 AGLGVHLEVAQDLKV--PTVQVHAPHPHTR---TREHAQAFRAKCDAAGIQVTVIF-GGFDGESYADIPTTARTVGLVPL 94 (290)
T ss_dssp SSSSBCHHHHHHTTC--SEEEEECCCGGGC---SHHHHHHHHHHHHHTTCEEEEEE-CCCTTCCCSSHHHHHHHSSSCST
T ss_pred CCHHHHHHHHHHcCC--CEEEecCCCCCcC---CHHHHHHHHHHHHHcCCEEEEEe-eccCCcccccccccccccCCCCH
Confidence 444556666666552 1222222221112 13457788888887422334442 22 1121 1133
Q ss_pred CChHHHHHHHHHHHHHhhhCCCCEE-EEecC-------chHHHHHHHHHh---CCCCCCcEEEEecCCCHHHHHHHHcCc
Q psy4448 120 CPVETQLKYFRKQLDLSVTHKLPLF-LHCRN-------AKSDFIEIMKEY---APKLPRKGVIHSFDGTPFQAVDSLKTK 188 (487)
Q Consensus 120 ~~~e~Q~~vF~~qL~LA~el~lPVi-IH~r~-------a~~d~l~iLk~~---~~~~~~~~v~H~FsG~~~~a~~~l~~~ 188 (487)
..++...+.+++.+++|.+++.+.+ +|+-. +.+.+.+.|++. ......++.+|....+.+.+.++++.
T Consensus 95 ~~r~~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~- 173 (290)
T 3tva_A 95 ETRASRVAEMKEISDFASWVGCPAIGLHIGFVPESSSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIED- 173 (290)
T ss_dssp TTHHHHHHHHHHHHHHHHHHTCSEEEECCCCCCCTTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEEcCCCCcccchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHh-
Confidence 4567788999999999999999855 66521 222232222221 11111367788766677666665543
Q ss_pred cchhHhhhcCCCceeeccCC
Q psy4448 189 ENLETVKSIPEDRLLLETDC 208 (487)
Q Consensus 189 ~g~e~v~~iP~driLlETD~ 208 (487)
++.+++=+.=|.
T Consensus 174 --------~~~~~~g~~~D~ 185 (290)
T 3tva_A 174 --------VNRPNLGINFDP 185 (290)
T ss_dssp --------HCCTTEEEEECH
T ss_pred --------cCCCCEEEEecc
Confidence 444455555554
No 222
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=43.20 E-value=72 Score=31.14 Aligned_cols=100 Identities=8% Similarity=0.123 Sum_probs=62.3
Q ss_pred CEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHhCCCCCCcEEEEecCCCHHHH
Q psy4448 103 KVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA 181 (487)
Q Consensus 103 ~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a 181 (487)
.++..|-+|==+. -+.+..+++++..++.+.. +.||+.++-. ...+++++.+....
T Consensus 45 gl~v~GtTGE~~~----Ls~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~A~~------------------ 101 (309)
T 3fkr_A 45 GLCILANFSEQFA----ITDDERDVLTRTILEHVAG-RVPVIVTTSHYSTQVCAARSLRAQQ------------------ 101 (309)
T ss_dssp CEEESSGGGTGGG----SCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHHHH------------------
T ss_pred EEEECccccCccc----CCHHHHHHHHHHHHHHhCC-CCcEEEecCCchHHHHHHHHHHHHH------------------
Confidence 4555555554221 2467788888888887743 6788888753 56666666544321
Q ss_pred HHHHcCccchhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhh
Q psy4448 182 VDSLKTKENLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSV 261 (487)
Q Consensus 182 ~~~l~~~~g~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~ 261 (487)
.+.|-+|+=+ ||.. ..+.|.|..+++..-.+|+
T Consensus 102 ---------------~Gadavlv~~--Pyy~------------------------------~~~~~s~~~l~~~f~~va~ 134 (309)
T 3fkr_A 102 ---------------LGAAMVMAMP--PYHG------------------------------ATFRVPEAQIFEFYARVSD 134 (309)
T ss_dssp ---------------TTCSEEEECC--SCBT------------------------------TTBCCCHHHHHHHHHHHHH
T ss_pred ---------------cCCCEEEEcC--CCCc------------------------------cCCCCCHHHHHHHHHHHHH
Confidence 1222233322 4431 1245678888888889999
Q ss_pred hCCCCEEEEec
Q psy4448 262 THKLPLFLHCR 272 (487)
Q Consensus 262 ~~~lPl~iH~r 272 (487)
..++||+|...
T Consensus 135 a~~lPiilYn~ 145 (309)
T 3fkr_A 135 AIAIPIMVQDA 145 (309)
T ss_dssp HCSSCEEEEEC
T ss_pred hcCCCEEEEeC
Confidence 99999999864
No 223
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=42.86 E-value=2.4e+02 Score=27.18 Aligned_cols=139 Identities=17% Similarity=0.194 Sum_probs=80.2
Q ss_pred CHHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--C-CeEEEeecCCCCCCCcCCCchhhHHHHHHHHH
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--E-RLYSTVGCHPTRCSEFENDPEGYLQSLDKIIK 98 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~-~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~ 98 (487)
.+...++...+.||..+++.|+ +.++..++++.+.+. + ++-..+|+=-.. ..+.++.. +.+.
T Consensus 29 ~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~-------t~~ai~la-~~a~ 100 (301)
T 3m5v_A 29 SYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNA-------THEAVGLA-KFAK 100 (301)
T ss_dssp HHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSS-------HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCC-------HHHHHHHH-HHHH
Confidence 3456777778899999998877 456666666654332 4 444444542111 23334333 3343
Q ss_pred hcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC------chHHHHHHHHHh-CCCCCCcEEE
Q psy4448 99 EGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN------AKSDFIEIMKEY-APKLPRKGVI 171 (487)
Q Consensus 99 ~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~------a~~d~l~iLk~~-~~~~~~~~v~ 171 (487)
+ -.+.|| =+--.||. . ..|..+++..-++|...++||+|...- -.-+++.-|.+. +. ..+|=
T Consensus 101 ~--~Gadav-lv~~P~y~-~----~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La~~~pn---ivgiK 169 (301)
T 3m5v_A 101 E--HGADGI-LSVAPYYN-K----PTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLFRDCEN---IYGVK 169 (301)
T ss_dssp H--TTCSEE-EEECCCSS-C----CCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHHHHCTT---EEEEE
T ss_pred H--cCCCEE-EEcCCCCC-C----CCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHHhcCCC---EEEEE
Confidence 3 133444 23345554 1 247888888889999999999998742 122444444344 43 22333
Q ss_pred EecCCCHHHHHHHHcC
Q psy4448 172 HSFDGTPFQAVDSLKT 187 (487)
Q Consensus 172 H~FsG~~~~a~~~l~~ 187 (487)
--+|+.....++++.
T Consensus 170 -dssgd~~~~~~~~~~ 184 (301)
T 3m5v_A 170 -EASGNIDKCVDLLAH 184 (301)
T ss_dssp -ECSSCHHHHHHHHHH
T ss_pred -eCCCCHHHHHHHHHh
Confidence 347888777776654
No 224
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=42.39 E-value=2.6e+02 Score=27.59 Aligned_cols=136 Identities=7% Similarity=0.034 Sum_probs=76.5
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcCCC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSDER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.||..+++.|+ +.++..++++.+ ..++ |+..+|-. . ..+.++..+. +.+-
T Consensus 49 l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~-~~grvpViaGvg~~--s-------t~eai~la~~-A~~~ 117 (344)
T 2hmc_A 49 LVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERL-VKAGIPVIVGTGAV--N-------TASAVAHAVH-AQKV 117 (344)
T ss_dssp HHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHH-HHTTCCEEEECCCS--S-------HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHH-hCCCCcEEEecCCC--C-------HHHHHHHHHH-HHhc
Confidence 446777778899999998876 466677777662 2233 44444421 1 2233433333 3331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhh-hCCCCEEEEecC-----chHHHHHHH-HHhCCCCCCcEEEEe
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSV-THKLPLFLHCRN-----AKSDFIEIM-KEYAPKLPRKGVIHS 173 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~-el~lPViIH~r~-----a~~d~l~iL-k~~~~~~~~~~v~H~ 173 (487)
.+.|| =+-..||... ..|..+++..-++|. ..++||+|...- -..+++.-| .+.+. -+-+--
T Consensus 118 --Gadav-lv~~P~y~~~----~s~~~l~~~f~~IA~aa~~lPiilYn~P~tg~~l~~e~~~~L~a~~pn----IvGiKd 186 (344)
T 2hmc_A 118 --GAKGL-MVIPRVLSRG----SVIAAQKAHFKAILSAAPEIPAVIYNSPYYGFATRADLFFALRAEHKN----LVGFKE 186 (344)
T ss_dssp --TCSEE-EECCCCSSST----TCHHHHHHHHHHHHHHSTTSCEEEEEBGGGTBCCCHHHHHHHHHHCTT----EEEEEE
T ss_pred --CCCEE-EECCCccCCC----CCHHHHHHHHHHHHhhCCCCcEEEEecCccCCCcCHHHHHHHHhcCCC----EEEEEc
Confidence 23344 2345665410 137888888888998 889999997642 123444444 55432 122333
Q ss_pred cCC--CHHHHHHHHcC
Q psy4448 174 FDG--TPFQAVDSLKT 187 (487)
Q Consensus 174 FsG--~~~~a~~~l~~ 187 (487)
-+| +...+.++++.
T Consensus 187 ssgp~d~~~~~~~~~~ 202 (344)
T 2hmc_A 187 FGGPADMRYAAENITS 202 (344)
T ss_dssp CSCHHHHHHHHHHTSC
T ss_pred CCCCCCHHHHHHHHHH
Confidence 456 66666666543
No 225
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=42.17 E-value=73 Score=30.88 Aligned_cols=40 Identities=10% Similarity=0.162 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++...+.+.. +.||+.|+-. ...+++++.+..
T Consensus 58 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 98 (297)
T 3flu_A 58 SVEEHTAVIEAVVKHVAK-RVPVIAGTGANNTVEAIALSQAA 98 (297)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 467788888888887764 5888888764 566666666543
No 226
>2zds_A Putative DNA-binding protein; TIM-barrel fold, structural genomics, NPPSFA; 2.30A {Streptomyces coelicolor}
Probab=41.71 E-value=1.1e+02 Score=29.04 Aligned_cols=134 Identities=10% Similarity=-0.050 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHhcCCCEEEEEC----CCH-------HhHHHHHHHHhcCCCeEEEeecC--------CCCC-C-------
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTG----TNV-------EDSISSLKLAQSDERLYSTVGCH--------PTRC-S------- 80 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~----~~~-------~~~~~~~~la~~~~~v~~avGiH--------P~~~-~------- 80 (487)
.++++.++.+++.|++.+=+.. .++ +....+.+++++++--..+++.| |.+- .
T Consensus 15 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~g~~~~~p~~~~~~~~~~~~ 94 (340)
T 2zds_A 15 LPLEEVCRLARDFGYDGLELACWGDHFEVDKALADPSYVDSRHQLLDKYGLKCWAISNHLVGQAVCDAIIDERHEAILPA 94 (340)
T ss_dssp SCHHHHHHHHHHHTCSEEEEESSTTTCCHHHHHHCTTHHHHHHHHHHHTTCEEEEEEEHHHHHHHHCSCCSHHHHHHSCH
T ss_pred CCHHHHHHHHHHcCCCEEEeccccccCCccccccCHHHHHHHHHHHHHcCCeEEEeeccccccccccccccccccccccc
Confidence 5889999999999998765543 122 23456677777777555666665 5211 0
Q ss_pred CcCC--C----chhhHHHHHHHHH---hcCCCEEEEEeeCCCCC-----CCCCC------ChHHHHHHHHHHHHHhhhCC
Q psy4448 81 EFEN--D----PEGYLQSLDKIIK---EGGKKVVAFGEFGLDYD-----RVQYC------PVETQLKYFRKQLDLSVTHK 140 (487)
Q Consensus 81 ~~~~--~----~~~~l~~L~~ll~---~~~~~vvaIGEIGLD~~-----~~~~~------~~e~Q~~vF~~qL~LA~el~ 140 (487)
.... + .+..++.+++.+. .-..+.+.+ -.|-... +...+ .++.-.+.|++..++|+++|
T Consensus 95 ~l~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 173 (340)
T 2zds_A 95 RIWGDGDAEGVRQRAAAEIKDTARAAARLGVDTVIG-FTGSAIWHLVAMFPPAPESMIERGYQDFADRWNPILDVFDAEG 173 (340)
T ss_dssp HHHTTCCHHHHHHHHHHHHHHHHHHHHHHTCSEEEE-CCCCSSGGGTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEE-ecCCcCcccccccCCCcccchHHHHHHHHHHHHHHHHHHHHcC
Confidence 0000 0 0122333333332 211233333 3443211 00000 12234567788888999999
Q ss_pred CCEEEEecC-----chHHHHHHHHHhC
Q psy4448 141 LPLFLHCRN-----AKSDFIEIMKEYA 162 (487)
Q Consensus 141 lPViIH~r~-----a~~d~l~iLk~~~ 162 (487)
+.+.||... ..+++.+++++.+
T Consensus 174 v~l~lEn~~~~~~~~~~~~~~ll~~v~ 200 (340)
T 2zds_A 174 VRFAHEVHPSEIAYDYWTTHRALEAVG 200 (340)
T ss_dssp CEEEEECCTTSSCCSHHHHHHHHHHTT
T ss_pred CEEEEEcCCCcccCCHHHHHHHHHhcC
Confidence 999999853 3567888888775
No 227
>2i5g_A Amidohydrolase; NYSGXRC, NYSGXRC-9311A, PSI2, structural genomics, protein structure initiative; 2.60A {Pseudomonas aeruginosa}
Probab=41.18 E-value=55 Score=32.41 Aligned_cols=76 Identities=17% Similarity=0.090 Sum_probs=45.5
Q ss_pred HHHHHHHHHHhhhCCCCEEE-Ee---------cCchHHHHHHHHHhCCCCCCcEEEEecC----C--CHHHHHHHHcCcc
Q psy4448 126 LKYFRKQLDLSVTHKLPLFL-HC---------RNAKSDFIEIMKEYAPKLPRKGVIHSFD----G--TPFQAVDSLKTKE 189 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViI-H~---------r~a~~d~l~iLk~~~~~~~~~~v~H~Fs----G--~~~~a~~~l~~~~ 189 (487)
.+.|...+++++ .||++ |+ |+-.++.+..|.+.+ .+|-.+|- . +...+..+++.
T Consensus 162 ~~~~~dvl~~s~---~Pvi~SHsn~~al~~h~RNl~De~irala~~G-----Gvigv~~~~~fl~~~~~~t~~~~~~h-- 231 (325)
T 2i5g_A 162 SKTSEEVILESK---KPVCYSHCLPSGLKEHPRNKSDEELKFIADHG-----GFVGVTMFAPFLKKGIDSTIDDYAEA-- 231 (325)
T ss_dssp HHHHHHHHHHCS---SCCEEEEECBTTTCCCTTSBCHHHHHHHHHTT-----CEEEECCCGGGSSSGGGCBHHHHHHH--
T ss_pred HHHHHHHHHHhC---CCEEEeCCCccccCCCCCCCCHHHHHHHHHcC-----CeEEEeecchhcCCCCCCCHHHHHHH--
Confidence 344555666654 88776 65 455778888887763 24445542 1 11112222222
Q ss_pred chhHhhhcCCCceeeccCCCCC
Q psy4448 190 NLETVKSIPEDRLLLETDCPWC 211 (487)
Q Consensus 190 g~e~v~~iP~driLlETD~P~l 211 (487)
-..+++.+..|+|.|.||.|+-
T Consensus 232 i~~i~~~~G~dhVgiGsDf~~~ 253 (325)
T 2i5g_A 232 IEYVMNIVGEDAIGIGTDFTQG 253 (325)
T ss_dssp HHHHHHHHCTTSEEECCCBCTT
T ss_pred HHHHHHhcCCceEEECCcCccc
Confidence 1235678899999999999853
No 228
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=40.97 E-value=1.1e+02 Score=28.54 Aligned_cols=131 Identities=12% Similarity=-0.030 Sum_probs=69.5
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHH---HhcCCCE
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKII---KEGGKKV 104 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll---~~~~~~v 104 (487)
.++++.++.+++.|++.+=+.+..+ +.+.+.++++++.--..++.+ |...... ..+..++.+++.+ ..-..+.
T Consensus 31 ~~~~~~l~~~~~~G~~~vEl~~~~~-~~~~~~~~l~~~gl~~~~~~~-~~~~~~~--~~~~~~~~~~~~i~~a~~lG~~~ 106 (301)
T 3cny_A 31 NNLQQLLSDIVVAGFQGTEVGGFFP-GPEKLNYELKLRNLEIAGQWF-SSYIIRD--GIEKASEAFEKHCQYLKAINAPV 106 (301)
T ss_dssp CCHHHHHHHHHHHTCCEECCCTTCC-CHHHHHHHHHHTTCEECEEEE-EECHHHH--HHHHHHHHHHHHHHHHHHTTCCE
T ss_pred CCHHHHHHHHHHhCCCEEEecCCCC-CHHHHHHHHHHCCCeEEEEec-cCCCChh--hHHHHHHHHHHHHHHHHHcCCCE
Confidence 4789999999999998654433333 556666666666532222211 1111000 0112233333332 2211234
Q ss_pred EEEEee-----CCCC---C-CCC---CCChHHHHHHHHHHHHHhhhCCCCEEEEecC-----chHHHHHHHHHhC
Q psy4448 105 VAFGEF-----GLDY---D-RVQ---YCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-----AKSDFIEIMKEYA 162 (487)
Q Consensus 105 vaIGEI-----GLD~---~-~~~---~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-----a~~d~l~iLk~~~ 162 (487)
+.+... |... . +.. ...++.-.+.|++..++|+++|+.+.||... ..+++.+++++.+
T Consensus 107 v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lE~~~~~~~~~~~~~~~l~~~~~ 181 (301)
T 3cny_A 107 AVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKYGLKVAYHHHMGTGIQTKEETDRLMANTD 181 (301)
T ss_dssp EEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSSSCSHHHHHHHHHTSC
T ss_pred EEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCcccCCHHHHHHHHHhCC
Confidence 445432 3210 0 000 0112345677888889999999999999753 3567777887664
No 229
>4dzi_A Putative TIM-barrel metal-dependent hydrolase; amidohydrolase, bimetal binding site, enzyme FUNC initiative, EFI; HET: SO4; 1.60A {Mycobacterium avium subsp}
Probab=40.81 E-value=7.4 Score=40.16 Aligned_cols=26 Identities=19% Similarity=0.362 Sum_probs=20.2
Q ss_pred HhhCCCHHHHHHHHHHHHHHhcCCCC
Q psy4448 383 AVRGVEREKLGPIIHQNTLRLFFPHE 408 (487)
Q Consensus 383 ~ikg~~~~~va~~~~~N~~rlf~~~~ 408 (487)
++.+++.++...+++.|+.|||++..
T Consensus 372 ~l~~l~~~~~~~I~~~NA~rl~~l~~ 397 (423)
T 4dzi_A 372 ELKGFSESDIRKIMRDNALDLLGVQV 397 (423)
T ss_dssp GCTTSCHHHHHHHHTHHHHHHHC---
T ss_pred HhcCCCHHHHHHHHHHHHHHHHCCCc
Confidence 34578889999999999999999873
No 230
>2p9b_A Possible prolidase; protein structure initiative II, PSI-2, amidohydrolase, structural genomics; 1.70A {Bifidobacterium longum NCC2705} SCOP: b.92.1.10 c.1.9.17
Probab=40.77 E-value=2.8e+02 Score=27.51 Aligned_cols=34 Identities=12% Similarity=0.023 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 374 IVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 374 l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
+...+..+.+..+++++++.+..+.|.-+++++.
T Consensus 356 ~~~e~~~~~~~~~ls~~~al~~~T~~~A~~lgl~ 389 (458)
T 2p9b_A 356 TWRELELLVAYAGFSPAEALHAATAVNASILGVD 389 (458)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHTHHHHHHTTCT
T ss_pred HHHHHHHHHHhcCCCHHHHHHHHHHHHHHHhCCc
Confidence 3344444545468999999999999999999986
No 231
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=40.58 E-value=80 Score=30.93 Aligned_cols=23 Identities=22% Similarity=0.488 Sum_probs=12.8
Q ss_pred CHHHHHHHHHhcCCCEEEEECCC
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGTN 51 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~~ 51 (487)
.+++++..+..+||+.++++..|
T Consensus 87 ~l~~~L~~~~~~GI~niLaLrGD 109 (310)
T 3apt_A 87 EVAEVLHRFVESGVENLLALRGD 109 (310)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCC
T ss_pred HHHHHHHHHHHCCCCEEEEEcCC
Confidence 34455555666666666655443
No 232
>2qt3_A N-isopropylammelide isopropyl amidohydrolase; N-isopropylammelide isopropylaminohydrolase ATZC, structural genomics, NYSGXRC, target 9364B; 2.24A {Pseudomonas SP}
Probab=39.94 E-value=34 Score=33.57 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=33.1
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHH-------HHHHHHHhCCCCCCCcEEEEee
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSD-------FIEIMKEYAPKLPRKGVIHSFD 299 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~-------~l~il~~~~~~~~~~gv~hsfs 299 (487)
+.|++.+++|+++++|+.+|+..+.++ +++.+++... .+...+.|++.
T Consensus 198 ~~l~~~~~~A~~~g~~v~~H~~~~~~~~~~~~~~~~~~~~~~g~-~~~~~i~H~~~ 252 (403)
T 2qt3_A 198 GSLDLCFKLAKEYDVDIDYHIHDIGTVGVYSINRLAQKTIENGY-KGRVTTSHAWC 252 (403)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHHHHHHHTTC-TTSEEEEECTH
T ss_pred HHHHHHHHHHHHcCCCeEEEeCCcccchhHHHHHHHHHHHHcCC-CCCeEEEehhh
Confidence 678999999999999999999987543 3555555422 11234556554
No 233
>1p1m_A Hypothetical protein TM0936; putative metal dependent hydrolase, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: b.92.1.4 c.1.9.9 PDB: 2plm_A* 1j6p_A
Probab=39.62 E-value=24 Score=35.02 Aligned_cols=28 Identities=14% Similarity=0.347 Sum_probs=23.1
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHH
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDF 278 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~ 278 (487)
+.+++.+++|+++|+||.+|+....+++
T Consensus 181 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~ 208 (406)
T 1p1m_A 181 EYLKRVFDTAKSLNAPVTIHLYETSKEE 208 (406)
T ss_dssp HHHHHHHHHHHHTTCCEEEEESCSTTCC
T ss_pred HHHHHHHHHHHHCCCcEEEEcCCCchHH
Confidence 6788899999999999999997554433
No 234
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=39.13 E-value=2.8e+02 Score=26.94 Aligned_cols=58 Identities=21% Similarity=0.339 Sum_probs=27.8
Q ss_pred hHHHHHHHHHhcCCCEEEEEeeCCCCCCCCC--CChHHHHHHHHHHHHH-hhhCCCCEEEEecCc
Q psy4448 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQY--CPVETQLKYFRKQLDL-SVTHKLPLFLHCRNA 150 (487)
Q Consensus 89 ~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~--~~~e~Q~~vF~~qL~L-A~el~lPViIH~r~a 150 (487)
.++..++++++. -.++=|| ..-.+.+. .+.+...+-+...++. +.+.+.||+|.+.++
T Consensus 65 a~~~a~~~v~~G-AdiIDIG---geStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSIDT~~~ 125 (297)
T 1tx2_A 65 AVRHAKEMRDEG-AHIIDIG---GESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISIDTYKA 125 (297)
T ss_dssp HHHHHHHHHHTT-CSEEEEE---SCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEECSCH
T ss_pred HHHHHHHHHHcC-CCEEEEC---CCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEeCCCH
Confidence 344455666542 3344444 33222121 1223333334444443 445699999999874
No 235
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A
Probab=38.31 E-value=97 Score=29.89 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=40.1
Q ss_pred HHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 92 SLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 92 ~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
.+.+++..+ ..-+.|||.|.... .+.+.+.+.++.+++.+.+.+..-+..+-+.
T Consensus 264 ~~~~~~~~~-g~Pv~igEfG~~~~----~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~~ 317 (343)
T 1ceo_A 264 PAIEFREKK-KCKLYCGEFGVIAI----ADLESRIKWHEDYISLLEEYDIGGAVWNYKK 317 (343)
T ss_dssp HHHHHHHHH-CCEEEEEEECCCTT----SCHHHHHHHHHHHHHHHHHTTCEEEESCSBS
T ss_pred HHHHHHHHh-CCCEEecccccccC----CChHHHHHHHHHHHHHHHHcCCCeEEeecCC
Confidence 333444443 45689999998742 3456788999999999999998888888654
No 236
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=38.27 E-value=82 Score=30.90 Aligned_cols=40 Identities=13% Similarity=0.231 Sum_probs=28.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++..++.+.. +.||+.++-. ...+++++.+..
T Consensus 73 s~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~~ai~la~~A 113 (315)
T 3si9_A 73 THEEHKRIIELCVEQVAK-RVPVVAGAGSNSTSEAVELAKHA 113 (315)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 467788888888887764 6888888764 566666666543
No 237
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=38.14 E-value=89 Score=30.33 Aligned_cols=40 Identities=13% Similarity=0.285 Sum_probs=28.8
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+..
T Consensus 63 s~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A 103 (301)
T 1xky_A 63 TSEEKVALYRHVVSVVDK-RVPVIAGTGSNNTHASIDLTKKA 103 (301)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CceEEeCCCCCCHHHHHHHHHHH
Confidence 457788888888887764 6888888865 566666666543
No 238
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=38.14 E-value=3.3e+02 Score=27.52 Aligned_cols=126 Identities=10% Similarity=0.045 Sum_probs=72.1
Q ss_pred ChHHHHHHHHHHHHHhhhC--CCCEEEEecCch-----HHHHHHHHHhCCCCCCcEEEEecC---CCHHHHHHHHcCccc
Q psy4448 121 PVETQLKYFRKQLDLSVTH--KLPLFLHCRNAK-----SDFIEIMKEYAPKLPRKGVIHSFD---GTPFQAVDSLKTKEN 190 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el--~lPViIH~r~a~-----~d~l~iLk~~~~~~~~~~v~H~Fs---G~~~~a~~~l~~~~g 190 (487)
..+.-.+++..-++..++. +.+|+||.-... .-.++.|+..+...- -+-+|.|. |+.+.++..|+
T Consensus 175 ~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~~~~~~~~~~~~d~l~~~g~d~D-vIG~syYp~W~~~l~~l~~~l~---- 249 (399)
T 1ur4_A 175 DWAKMSQLFNAGSQAVRETDSNILVALHFTNPETSGRYAWIAETLHRHHVDYD-VFASSYYPFWHGTLKNLTSVLT---- 249 (399)
T ss_dssp CHHHHHHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHHHHHHHHHHHTTCCCS-EEEEEECTTTSCCHHHHHHHHH----
T ss_pred cHHHHHHHHHHHHHHHHHhCCCCeEEEEeCCCcchHHHHHHHHHHHHcCCCcC-eEeEecCccchhhHHHHHHHHH----
Confidence 3455566777777766654 456999997643 335677777654321 13456554 56555444333
Q ss_pred hhHhhhcCCCceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCCChhhhHHHHHHHHHHhhhC
Q psy4448 191 LETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVYFRKQLDLSVTH 263 (487)
Q Consensus 191 ~e~v~~iP~driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~P~Q~~~F~~ql~lA~~~ 263 (487)
++.+....+=++.||-+|+-... ..+..+..+ ..+....+.+.+..|..+++..++..+..
T Consensus 250 -~l~~rygKpV~v~EtG~~~~~~~--~d~~~n~~~---------~~~~~~~~~~s~~gQa~~l~~l~~~v~~~ 310 (399)
T 1ur4_A 250 -SVADTYGKKVMVAETSYTYTAED--GDGHGNTAP---------KNGQTLNNPVTVQGQANAVRDVIQAVSDV 310 (399)
T ss_dssp -HHHHHHCCEEEEEEECCCSCSCC--SSSSCCSSS---------CTTSCCCSCSSHHHHHHHHHHHHHHHHTT
T ss_pred -HHHHHhCCcEEEEEecCCccCCC--CCCcccccc---------cccccCCCCCCHHHHHHHHHHHHHHHHhc
Confidence 23345578889999999984211 011111100 00111224567888999988877776665
No 239
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=38.10 E-value=90 Score=30.51 Aligned_cols=39 Identities=13% Similarity=0.087 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-....+++++.+.
T Consensus 63 s~eEr~~vi~~~~~~~~g-rvpViaGvg~st~~ai~la~~ 101 (314)
T 3d0c_A 63 TIEEAKQVATRVTELVNG-RATVVAGIGYSVDTAIELGKS 101 (314)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEEECSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEecCCcCHHHHHHHHHH
Confidence 457778888888877664 678888876655566665544
No 240
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=37.76 E-value=84 Score=31.06 Aligned_cols=39 Identities=8% Similarity=0.099 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 85 s~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~ 124 (332)
T 2r8w_A 85 TREERRRAIEAAATILRG-RRTLMAGIGALRTDEAVALAKD 124 (332)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEEECCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHH
Confidence 467788888888887764 6788888764 45566655543
No 241
>3ooq_A Amidohydrolase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, H PSI-2; 2.06A {Thermotoga maritima}
Probab=37.75 E-value=47 Score=32.85 Aligned_cols=65 Identities=14% Similarity=0.050 Sum_probs=40.9
Q ss_pred HHHHHHhhhCCCC-EEEEecCchHHHHHHHHHhCCCCCCcEEEEec----CCCH-------HHHHHHHcCccchhHhhhc
Q psy4448 130 RKQLDLSVTHKLP-LFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSF----DGTP-------FQAVDSLKTKENLETVKSI 197 (487)
Q Consensus 130 ~~qL~LA~el~lP-ViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~F----sG~~-------~~a~~~l~~~~g~e~v~~i 197 (487)
...++++.+++.+ .+.|+....++ ++.+++.+. .+.+|- ..+. .-++.+++. |
T Consensus 234 ~~~~~~~~~~g~~~~i~H~~~~~~~-~~~l~~~gv-----~v~~~P~~~~~~~~~~~~~~~~~~~~l~~~--G------- 298 (396)
T 3ooq_A 234 LTAIRIAEEFGFNLVIEHGTEAYKI-SKVLAEKKI-----PVVVGPLLTFRTKLELKDLTMETIAKLLKD--G------- 298 (396)
T ss_dssp HHHHHHHHHHTCCEEEEECTTGGGG-HHHHHHHTC-----CEEECCCSSCCCSGGGTTCCTTHHHHHHHT--T-------
T ss_pred HHHHHHHHHcCCCEEEecCchHHHH-HHHHHHCCC-----CEEECcccccccchhHHhhhhHHHHHHHHC--C-------
Confidence 3567788888887 77899987754 777777653 344443 2221 122333333 2
Q ss_pred CCCceeeccCCCCC
Q psy4448 198 PEDRLLLETDCPWC 211 (487)
Q Consensus 198 P~driLlETD~P~l 211 (487)
-++.++||+|+.
T Consensus 299 --v~v~lgtD~~~~ 310 (396)
T 3ooq_A 299 --VLIALMCDHPVI 310 (396)
T ss_dssp --CCEEECCTTTTS
T ss_pred --CEEEEEcCCCcc
Confidence 268999999976
No 242
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=37.74 E-value=93 Score=30.45 Aligned_cols=54 Identities=17% Similarity=0.306 Sum_probs=34.3
Q ss_pred CEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 103 KVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 103 ~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
.++..|-+|==+. -+.+..+++++..++.+.. +.||+.++-. ...+++++.+..
T Consensus 60 Gl~v~GtTGE~~~----Ls~~Er~~v~~~~v~~~~g-rvpViaGvg~~st~eai~la~~A 114 (314)
T 3qze_A 60 AIVAVGTTGESAT----LDVEEHIQVIRRVVDQVKG-RIPVIAGTGANSTREAVALTEAA 114 (314)
T ss_dssp EEEESSGGGTGGG----CCHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred EEEECccccChhh----CCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 3444455554221 2467788888888888764 5788888764 566666666543
No 243
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=37.39 E-value=1.6e+02 Score=27.42 Aligned_cols=26 Identities=4% Similarity=0.031 Sum_probs=17.6
Q ss_pred hHHHHHHHHHHHHHhhhCCCCEEEEe
Q psy4448 122 VETQLKYFRKQLDLSVTHKLPLFLHC 147 (487)
Q Consensus 122 ~e~Q~~vF~~qL~LA~el~lPViIH~ 147 (487)
++...+.+++.+++|.+++.+.++|.
T Consensus 108 r~~~~~~~~~~i~~A~~lG~~~v~~~ 133 (290)
T 2zvr_A 108 RKKAIERVVKHTEVAGMFGALVIIGL 133 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHTCEEEESG
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEec
Confidence 34456667777777777777777665
No 244
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=37.23 E-value=89 Score=30.13 Aligned_cols=39 Identities=5% Similarity=0.181 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 51 s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~ 90 (292)
T 2vc6_A 51 SKSEHEQVVEITIKTANG-RVPVIAGAGSNSTAEAIAFVRH 90 (292)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHH
Confidence 467788888888887764 6888888865 45666666544
No 245
>3ly0_A Dipeptidase AC. metallo peptidase. merops family M19; structural genomics, nysgrc, target 9523C, phosphinate inhibitor, PSI-2; HET: LY0; 1.40A {Rhodobacter sphaeroides} PDB: 3fdg_A
Probab=37.06 E-value=2e+02 Score=28.92 Aligned_cols=109 Identities=15% Similarity=0.196 Sum_probs=67.8
Q ss_pred hCCCCEEE-E---------eccchHHHHHHHHHhCCCCCCCcEEEEeeCCcccc--------cccccc-hhhH-HHhhhC
Q psy4448 262 THKLPLFL-H---------CRNAKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQA--------VDSLKT-KENL-ETVKSI 321 (487)
Q Consensus 262 ~~~lPl~i-H---------~r~a~~~~l~il~~~~~~~~~~gv~hsfsG~~~~~--------~~~~k~-~~~~-e~v~~i 321 (487)
-...||+. | .|+--++.++.|.+.. =+++++...... ..++.. -+.. -+++.+
T Consensus 224 ~s~~PviaSHSnaral~~h~RNl~De~l~ala~~G-------Gvigv~f~~~fl~~~~~~~~~~tl~~~~~Hi~hi~~l~ 296 (364)
T 3ly0_A 224 LSDAPLVATHSNAHAVTPSTRNLTDRQLAMIRESR-------GMVGLNFATSFLREDGRRSAEMGWEPVLRHLDHLIDRL 296 (364)
T ss_dssp HCSSCCEETTCCBTTTSCCTTSBCHHHHHHHHHTT-------CEEEECCCHHHHSTTCCCCSCCCSHHHHHHHHHHHHHH
T ss_pred hcCCCeEEeCCchhhcCCCCCCCCHHHHHHHHHcC-------cEEEEeccHhhhcCCCCCCCCCCHHHHHHHHHHHHHhc
Confidence 34579774 5 4888999999999852 256665532100 001100 0112 356678
Q ss_pred CCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHH
Q psy4448 322 PEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPIIHQNTL 401 (487)
Q Consensus 322 PldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~ 401 (487)
..|.+=|=||---.. .| .+-...+.++.+++.+.+ +|.+.+++..++..|+.
T Consensus 297 G~dhVgiGsDfdG~~-~p--------------------------~gl~d~s~~p~L~~~L~~-rG~se~~i~ki~g~N~l 348 (364)
T 3ly0_A 297 GEDHVGMGSDFDGAT-IP--------------------------QGIADVTGLPALQAAMRA-HGYDEPLMRKLCHENWY 348 (364)
T ss_dssp CTTSEEECCCBTTSC-CC--------------------------TTTCSGGGHHHHHHHHHH-HTCCHHHHHHHHTHHHH
T ss_pred CCCeEEECCCCCCCC-CC--------------------------CCCCCHHHHHHHHHHHHH-CCCCHHHHHHHHhHhHH
Confidence 899999999963211 11 111234455666665544 69999999999999999
Q ss_pred HhcC
Q psy4448 402 RLFF 405 (487)
Q Consensus 402 rlf~ 405 (487)
|+|+
T Consensus 349 Rvl~ 352 (364)
T 3ly0_A 349 GLLE 352 (364)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9985
No 246
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=36.87 E-value=83 Score=28.86 Aligned_cols=86 Identities=10% Similarity=0.065 Sum_probs=47.4
Q ss_pred HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHH
Q psy4448 53 EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQ 132 (487)
Q Consensus 53 ~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~q 132 (487)
.++...++.+++.+. -++-+.+.. . .+...+.+.+.+.++.=++.+++ .+.++...+...++...+.+++.
T Consensus 18 ~~~~~~l~~~~~~G~--~~vEl~~~~---~---~~~~~~~~~~~l~~~gl~~~~~~-~~~~~~~~d~~~r~~~~~~~~~~ 88 (275)
T 3qc0_A 18 CGFAEAVDICLKHGI--TAIAPWRDQ---V---AAIGLGEAGRIVRANGLKLTGLC-RGGFFPAPDASGREKAIDDNRRA 88 (275)
T ss_dssp CCHHHHHHHHHHTTC--CEEECBHHH---H---HHHCHHHHHHHHHHHTCEESCEE-EEECCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCC--CEEEecccc---c---cccCHHHHHHHHHHcCCceEEee-cCCCcCCCCHHHHHHHHHHHHHH
Confidence 456777777777652 223332211 1 12346677777776422233333 12232211111234556889999
Q ss_pred HHHhhhCCCCE-EEEe
Q psy4448 133 LDLSVTHKLPL-FLHC 147 (487)
Q Consensus 133 L~LA~el~lPV-iIH~ 147 (487)
+++|.+++.+. ++|+
T Consensus 89 i~~a~~lG~~~v~~~~ 104 (275)
T 3qc0_A 89 VDEAAELGADCLVLVA 104 (275)
T ss_dssp HHHHHHTTCSCEEEEC
T ss_pred HHHHHHhCCCEEEEee
Confidence 99999999984 5786
No 247
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=36.75 E-value=3e+02 Score=26.70 Aligned_cols=139 Identities=12% Similarity=0.036 Sum_probs=78.2
Q ss_pred HHHHHHHHHhcCCCEEEEECC-------CHHhHHHHHHHHhcC--CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhc
Q psy4448 30 IDHVLNRAWNAGLEKIIVTGT-------NVEDSISSLKLAQSD--ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEG 100 (487)
Q Consensus 30 ~~~vl~ra~~~GV~~ii~v~~-------~~~~~~~~~~la~~~--~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~ 100 (487)
+..+++...+.||..+++.|+ +.++..++++.+.+. +++-.-+|+=-.. ..+.++..+. +.+.
T Consensus 34 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~-------t~~ai~la~~-a~~~ 105 (318)
T 3qfe_A 34 QERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVGAHS-------TRQVLEHIND-ASVA 105 (318)
T ss_dssp HHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECCCSS-------HHHHHHHHHH-HHHH
T ss_pred HHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCC-------HHHHHHHHHH-HHHc
Confidence 445777788899999999886 466666777664432 3333333442111 2333433333 3331
Q ss_pred CCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc-------hHHHHHHHHH-hCCCCCCcEEEE
Q psy4448 101 GKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA-------KSDFIEIMKE-YAPKLPRKGVIH 172 (487)
Q Consensus 101 ~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a-------~~d~l~iLk~-~~~~~~~~~v~H 172 (487)
.+.|| =+--.||+ ..+ ..|..+++..-++|...++||+|...-+ ..+++.-|.+ .+. ..+ +-
T Consensus 106 --Gadav-lv~~P~y~-~kp--~~~~~l~~~f~~ia~a~~lPiilYn~P~~t~g~~l~~~~~~~La~~~pn---Ivg-iK 175 (318)
T 3qfe_A 106 --GANYV-LVLPPAYF-GKA--TTPPVIKSFFDDVSCQSPLPVVIYNFPGVCNGIDLDSDMITTIARKNPN---VVG-VK 175 (318)
T ss_dssp --TCSEE-EECCCCC----C--CCHHHHHHHHHHHHHHCSSCEEEEECCC----CCCCHHHHHHHHHHCTT---EEE-EE
T ss_pred --CCCEE-EEeCCccc-CCC--CCHHHHHHHHHHHHhhCCCCEEEEeCCcccCCCCCCHHHHHHHHhhCCC---EEE-EE
Confidence 23344 23344333 111 1388888888899999999999887532 1245544443 532 123 33
Q ss_pred ecCCCHHHHHHHHc
Q psy4448 173 SFDGTPFQAVDSLK 186 (487)
Q Consensus 173 ~FsG~~~~a~~~l~ 186 (487)
--+|+...+.++++
T Consensus 176 dssgd~~~~~~~~~ 189 (318)
T 3qfe_A 176 LTCASVGKITRLAA 189 (318)
T ss_dssp ESSCCHHHHHHHHH
T ss_pred eCCCCHHHHHHHHH
Confidence 45788877777664
No 248
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=36.54 E-value=88 Score=29.20 Aligned_cols=84 Identities=6% Similarity=-0.043 Sum_probs=46.9
Q ss_pred hHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCC----CCCCCCCChHHHHHHH
Q psy4448 54 DSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLD----YDRVQYCPVETQLKYF 129 (487)
Q Consensus 54 ~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD----~~~~~~~~~e~Q~~vF 129 (487)
++...++.+++.+.= ++-+.+.....+ ....++.+.+++.++ .+...+=.|.. ....+...++...+.+
T Consensus 18 ~~~~~l~~~~~~G~~--~vEl~~~~~~~~---~~~~~~~~~~~l~~~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~ 90 (294)
T 3vni_A 18 DYKYYIEKVAKLGFD--ILEIAASPLPFY---SDIQINELKACAHGN--GITLTVGHGPSAEQNLSSPDPDIRKNAKAFY 90 (294)
T ss_dssp CHHHHHHHHHHHTCS--EEEEESTTGGGC---CHHHHHHHHHHHHHT--TCEEEEEECCCGGGCTTCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCC--EEEecCcccCCc---CHHHHHHHHHHHHHc--CCeEEEeecCCCCcCCCCCCHHHHHHHHHHH
Confidence 567777777765421 222222111122 135578888888874 33333323332 2110111134567889
Q ss_pred HHHHHHhhhCCCCEE
Q psy4448 130 RKQLDLSVTHKLPLF 144 (487)
Q Consensus 130 ~~qL~LA~el~lPVi 144 (487)
++.+++|.+++.+.+
T Consensus 91 ~~~i~~a~~lG~~~v 105 (294)
T 3vni_A 91 TDLLKRLYKLDVHLI 105 (294)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHhCCCee
Confidence 999999999999988
No 249
>2pgf_A Adenosine deaminase; metallo-dependent hydrolase, structural genomics, medical ST genomics of pathogenic protozoa consortium, MSGPP; HET: MSE ADN; 1.89A {Plasmodium vivax} PDB: 2pgr_A* 2qvn_A* 3ewc_A* 3ewd_A* 2amx_A
Probab=36.39 E-value=1.1e+02 Score=30.54 Aligned_cols=35 Identities=17% Similarity=0.068 Sum_probs=27.3
Q ss_pred ccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 372 ANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 372 ~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.++..-+..++...|++.+++ ..+..|+.+...++
T Consensus 325 ~~l~~e~~~a~~~~~l~~~~l-~~lt~ns~~asf~~ 359 (371)
T 2pgf_A 325 TNINDDYEELYTHLNFTLEDF-MKMNEWALEKSFMD 359 (371)
T ss_dssp CCHHHHHHHHHHHHCCCHHHH-HHHHHHHHHHCCSC
T ss_pred CCHHHHHHHHHHHhCCCHHHH-HHHHHHHHHHHcCC
Confidence 378888888999899999998 66677877655444
No 250
>1qtw_A Endonuclease IV; DNA repair enzyme, TIM barrel, trinuclear Zn cluster, hydrolase; 1.02A {Escherichia coli} SCOP: c.1.15.1 PDB: 1qum_A* 2nqh_A 2nqj_A* 2nq9_A*
Probab=35.55 E-value=1.5e+02 Score=27.34 Aligned_cols=18 Identities=11% Similarity=0.027 Sum_probs=14.8
Q ss_pred CCHHHHHHHHHhcCCCEE
Q psy4448 28 PDIDHVLNRAWNAGLEKI 45 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~i 45 (487)
.++++.++.+.+.|++.+
T Consensus 12 ~~l~~~l~~~~~~G~~~v 29 (285)
T 1qtw_A 12 GGLANAAIRAAEIDATAF 29 (285)
T ss_dssp TCHHHHHHHHHHTTCSEE
T ss_pred cCHHHHHHHHHHcCCCEE
Confidence 468889999999998854
No 251
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=35.54 E-value=1e+02 Score=30.00 Aligned_cols=40 Identities=8% Similarity=0.089 Sum_probs=28.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+..
T Consensus 67 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~st~~ai~la~~A 107 (304)
T 3cpr_A 67 TAAEKLELLKAVREEVGD-RAKLIAGVGTNNTRTSVELAEAA 107 (304)
T ss_dssp CHHHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEecCCCCCHHHHHHHHHHH
Confidence 467788888888887654 6788888865 566666666543
No 252
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=35.05 E-value=94 Score=30.86 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=27.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||++++-. ...+++++.+.
T Consensus 82 s~eEr~~vi~~~ve~~~g-rvpViaGvg~~st~eai~la~~ 121 (343)
T 2v9d_A 82 GAEERKAIARFAIDHVDR-RVPVLIGTGGTNARETIELSQH 121 (343)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHH
Confidence 457788888888887764 6788888764 45666666543
No 253
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=35.04 E-value=92 Score=30.15 Aligned_cols=39 Identities=5% Similarity=0.104 Sum_probs=27.3
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 51 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~ 90 (297)
T 2rfg_A 51 TEEEHKRVVALVAEQAQG-RVPVIAGAGSNNPVEAVRYAQH 90 (297)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEccCCCCHHHHHHHHHH
Confidence 457788888888887764 6788888765 45566665543
No 254
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=34.86 E-value=2.6e+02 Score=25.34 Aligned_cols=55 Identities=11% Similarity=0.071 Sum_probs=27.0
Q ss_pred hHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEE
Q psy4448 89 YLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLF 144 (487)
Q Consensus 89 ~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPVi 144 (487)
..+.+.+++.++.=++.+++ ...++...+...++...+.+++.+++|.++|.+.+
T Consensus 47 ~~~~~~~~l~~~gl~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v 101 (278)
T 1i60_A 47 SLDDLAEYFQTHHIKPLALN-ALVFFNNRDEKGHNEIITEFKGMMETCKTLGVKYV 101 (278)
T ss_dssp CHHHHHHHHHTSSCEEEEEE-EEECCSSCCHHHHHHHHHHHHHHHHHHHHHTCCEE
T ss_pred CHHHHHHHHHHcCCCeeeec-cccccccCCHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 46677777766421222232 12232210111123345667777777777776644
No 255
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=34.53 E-value=1e+02 Score=30.12 Aligned_cols=40 Identities=5% Similarity=-0.040 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEec-CchHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCR-NAKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r-~a~~d~l~iLk~~ 161 (487)
+.+..+++++..++.+.. +.||+.++- ...++++++.+..
T Consensus 75 s~~Er~~v~~~~v~~~~g-rvpViaGvg~~~t~~ai~la~~A 115 (315)
T 3na8_A 75 SDPEWDEVVDFTLKTVAH-RVPTIVSVSDLTTAKTVRRAQFA 115 (315)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHHH
Confidence 457788888888887764 688888875 3566666666543
No 256
>1yrr_A N-acetylglucosamine-6-phosphate deacetylase; (beta/alpha)8 barrel, beta sandwich, hydrolase; 2.00A {Escherichia coli} SCOP: b.92.1.5 c.1.9.10 PDB: 1ymy_A 2p50_A 2p53_A*
Probab=34.44 E-value=3.1e+02 Score=26.48 Aligned_cols=31 Identities=3% Similarity=-0.014 Sum_probs=26.0
Q ss_pred HHHHHHhhhCCCCEEE-EeccchHHHHHHHHH
Q psy4448 254 RKQLDLSVTHKLPLFL-HCRNAKSDFIEIMKE 284 (487)
Q Consensus 254 ~~ql~lA~~~~lPl~i-H~r~a~~~~l~il~~ 284 (487)
...+++|.++|+|+.+ |+-...+++...++.
T Consensus 178 ~~~~~~a~~~g~~v~~gH~~~~~~~~~~~~~~ 209 (382)
T 1yrr_A 178 AEVISKLANAGIVVSAGHSNATLKEAKAGFRA 209 (382)
T ss_dssp HHHHHHHHHTTCEEEECSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEECCCCCHHHHHHHHHc
Confidence 3568899999999999 999888888777764
No 257
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=34.40 E-value=96 Score=30.15 Aligned_cols=39 Identities=13% Similarity=0.331 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 63 s~eEr~~vi~~~~~~~~g-rvpViaGvg~~st~~ai~la~~ 102 (306)
T 1o5k_A 63 NEDEREKLVSRTLEIVDG-KIPVIVGAGTNSTEKTLKLVKQ 102 (306)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEcCCCccHHHHHHHHHH
Confidence 457788888888887764 6888888865 45666666544
No 258
>2hnh_A DNA polymerase III alpha subunit; DNA replication, nucleotidyltransferase, beta, PHP, transferase; HET: DNA; 2.30A {Escherichia coli} PDB: 2hqa_A*
Probab=34.18 E-value=32 Score=39.03 Aligned_cols=37 Identities=11% Similarity=0.267 Sum_probs=28.9
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
++|.|||....-. .| ...+++++++|++.|+..+.+.
T Consensus 6 ~vdLH~HT~~S~l----DG-----~~~~~elv~~A~~~Gl~alAIT 42 (910)
T 2hnh_A 6 FVHLRVHSDYSMI----DG-----LAKTAPLVKKAAALGMPALAIT 42 (910)
T ss_dssp CCCCCBCCGGGSS----SC-----CSCHHHHHHHHHHTTCSEEEEC
T ss_pred eeeecccccCchh----cc-----cCCHHHHHHHHHHCCCCEEEEE
Confidence 7999999875311 13 6789999999999999876654
No 259
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=34.06 E-value=3e+02 Score=25.90 Aligned_cols=38 Identities=18% Similarity=0.254 Sum_probs=23.7
Q ss_pred CHHHHHHHHHhcCCCEEEEEC-----CCHHhHHHHHHHHhcCC
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTG-----TNVEDSISSLKLAQSDE 66 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~-----~~~~~~~~~~~la~~~~ 66 (487)
++++.++.++++|.+.+=+.+ ....+.+.+.++++++.
T Consensus 30 ~~~~~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~G 72 (303)
T 3l23_A 30 DVAANLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAG 72 (303)
T ss_dssp CHHHHHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcC
Confidence 789999999999988654433 12223444455555554
No 260
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=33.49 E-value=1.2e+02 Score=29.33 Aligned_cols=39 Identities=8% Similarity=0.128 Sum_probs=28.0
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 51 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~ 90 (294)
T 2ehh_A 51 TFEEHEKVIEFAVKRAAG-RIKVIAGTGGNATHEAVHLTAH 90 (294)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHH
Confidence 457788888888887764 6788888865 45666666654
No 261
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=33.41 E-value=1.1e+02 Score=29.37 Aligned_cols=39 Identities=13% Similarity=0.335 Sum_probs=27.4
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.|+-. ...+++++.+.
T Consensus 52 s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~ 91 (291)
T 3tak_A 52 SMEEHTQVIKEIIRVANK-RIPIIAGTGANSTREAIELTKA 91 (291)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHH
Confidence 457778888888887764 5788888764 56666666543
No 262
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=33.24 E-value=1.2e+02 Score=29.15 Aligned_cols=25 Identities=4% Similarity=-0.163 Sum_probs=21.2
Q ss_pred hhhHHHHHHHHHHhhhC---CCCEEEEe
Q psy4448 247 PANIVYFRKQLDLSVTH---KLPLFLHC 271 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~---~lPl~iH~ 271 (487)
|.|..+++..-.+|... ++||+|..
T Consensus 113 ~s~~~l~~~f~~va~a~p~~~lPiilYn 140 (294)
T 3b4u_A 113 VSDDGLFAWFSAVFSKIGKDARDILVYN 140 (294)
T ss_dssp CCHHHHHHHHHHHHHHHCTTCCCEEEEE
T ss_pred CCHHHHHHHHHHHHHhcCCCCCcEEEEE
Confidence 56778888888889988 99999987
No 263
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=33.05 E-value=39 Score=34.13 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=30.5
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHh
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 285 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~ 285 (487)
+.+++.+++|+++|+|+.+|+....+++...++..
T Consensus 227 ~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~ 261 (468)
T 3lnp_A 227 EPLKEITMLSDQLDMPVQIHLHETDFEVSESLETF 261 (468)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999888877777654
No 264
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=33.02 E-value=2.2e+02 Score=27.43 Aligned_cols=47 Identities=9% Similarity=0.046 Sum_probs=29.6
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEecCCC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHSFDGT 177 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~FsG~ 177 (487)
+.+...++.+++.+..+.+..-.-..+.++.|++.+. ..+.++..+.
T Consensus 117 ~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~ag~----~~v~i~let~ 163 (348)
T 3iix_A 117 DVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEAGA----DRYLLRHETA 163 (348)
T ss_dssp HHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHHTC----CEEECCCBCS
T ss_pred HHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHhCC----CEEeeeeeeC
Confidence 4566667777766666666555556788888887754 3444454444
No 265
>3id7_A Dipeptidase; streptomyces coelicolor A3(2), hydrolase; 1.30A {Streptomyces coelicolor} PDB: 3isi_X* 3itc_A* 3k5x_A* 3s2j_A* 3s2l_A* 3s2m_A* 3s2n_A*
Probab=32.91 E-value=1.8e+02 Score=29.68 Aligned_cols=62 Identities=15% Similarity=0.198 Sum_probs=41.4
Q ss_pred HhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHHhhCCCHHHHHHHH
Q psy4448 317 TVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAAVRGVEREKLGPII 396 (487)
Q Consensus 317 ~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ikg~~~~~va~~~ 396 (487)
+++.+..|.+-|=||---....| .+-...+.++.+++.+.+ +|.+.+++..++
T Consensus 306 i~~l~G~dhVgiGsDfDG~~~~P--------------------------~gl~dvs~~p~L~~~L~~-rG~se~di~ki~ 358 (400)
T 3id7_A 306 MREVAGVDHLGIGGDYDGTPFTP--------------------------DGLGDVSGYPNLIAELLD-RGWSQSDLAKLT 358 (400)
T ss_dssp HHHHHCGGGEEECCCBTTCSCCC--------------------------BTCSSTTCHHHHHHHHHH-TTCCHHHHHHHH
T ss_pred HHHhcCCceEEECCCCCCCCCCC--------------------------CCCCCHHHHHHHHHHHhh-cCCCHHHHHHHH
Confidence 45567889999999863321111 111233455555555533 499999999999
Q ss_pred HHHHHHhcC
Q psy4448 397 HQNTLRLFF 405 (487)
Q Consensus 397 ~~N~~rlf~ 405 (487)
..|+.|+|+
T Consensus 359 g~N~lRvl~ 367 (400)
T 3id7_A 359 WKNAVRVLD 367 (400)
T ss_dssp THHHHHHHH
T ss_pred HHhHHHHHH
Confidence 999999984
No 266
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=32.83 E-value=1.1e+02 Score=29.45 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=27.5
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 51 s~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~ 90 (289)
T 2yxg_A 51 SHEEHKKVIEKVVDVVNG-RVQVIAGAGSNCTEEAIELSVF 90 (289)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHH
Confidence 457788888888887764 6788888765 45666665543
No 267
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=31.71 E-value=78 Score=31.80 Aligned_cols=24 Identities=4% Similarity=-0.004 Sum_probs=15.1
Q ss_pred HHHHHHHHhcCCC-----EEEEECCCHHh
Q psy4448 31 DHVLNRAWNAGLE-----KIIVTGTNVED 54 (487)
Q Consensus 31 ~~vl~ra~~~GV~-----~ii~v~~~~~~ 54 (487)
.++|+.|.++|.+ .+=.....++.
T Consensus 24 k~lI~~A~~aGad~~~d~avKfQt~~~d~ 52 (350)
T 3g8r_A 24 VALIRAIRESCQGFDFDFGFKLQYRNLDT 52 (350)
T ss_dssp HHHHHHHHHHTTTCCSEEEEEEEECCHHH
T ss_pred HHHHHHHHHhCCcccCCeeEEccccchhh
Confidence 3578888888876 44344455444
No 268
>1lbq_A Ferrochelatase; rossmann fold, PI-helix, lyase; 2.40A {Saccharomyces cerevisiae} SCOP: c.92.1.1 PDB: 1l8x_A
Probab=31.52 E-value=2.8e+02 Score=27.66 Aligned_cols=137 Identities=11% Similarity=0.119 Sum_probs=71.2
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCCH--------HhHH---HHHHHHhcCCCe----EEEeecCCCCCCCcCCCchhhHH
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGTNV--------EDSI---SSLKLAQSDERL----YSTVGCHPTRCSEFENDPEGYLQ 91 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~~~--------~~~~---~~~~la~~~~~v----~~avGiHP~~~~~~~~~~~~~l~ 91 (487)
.+.++++++++++.|+++++++..-| ...+ +.+.-.+.+|.+ ...+|.||.++. ...+
T Consensus 108 ~P~i~d~l~~l~~~G~~~ivvlPlyPqyS~~ttgs~~~~i~~~l~~~~~~~~i~i~~i~~~~~~p~~I~-------ala~ 180 (362)
T 1lbq_A 108 KPLTAETYKQMLKDGVKKAVAFSQYPHFSYSTTGSSINELWRQIKALDSERSISWSVIDRWPTNEGLIK-------AFSE 180 (362)
T ss_dssp SSCHHHHHHHHHTTTCCEEEEEESCSSCCTTTHHHHHHHHHHHHHHHCTTCCSEEEEECCCTTCHHHHH-------HHHH
T ss_pred CCCHHHHHHHHHHcCCCeEEEEecchhccccchhHHHHHHHHHHHhcccCCCceEEEecCCCCCHHHHH-------HHHH
Confidence 68999999999999999998885433 2222 222222334543 344556665442 2234
Q ss_pred HHHHHHHhcCC---C--EEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCC----EEEEecC--------chHHH
Q psy4448 92 SLDKIIKEGGK---K--VVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLP----LFLHCRN--------AKSDF 154 (487)
Q Consensus 92 ~L~~ll~~~~~---~--vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lP----ViIH~r~--------a~~d~ 154 (487)
.+++.+..... . .+..-=-|+.-..++..+ .-+.++.+..-.++.+++++ +..-||- ..+++
T Consensus 181 ~I~~~l~~~~~~~~~~~~llfSaHglP~~~~~~GD-pY~~q~~~ta~ll~e~lg~~~~~~~~fQSr~G~~~WL~P~t~~~ 259 (362)
T 1lbq_A 181 NITKKLQEFPQPVRDKVVLLFSAHSLPMDVVNTGD-AYPAEVAATVYNIMQKLKFKNPYRLVWQSQVGPKPWLGAQTAEI 259 (362)
T ss_dssp HHHHHHHTSCSTTGGGCEEEEEEECCBHHHHTTTC-SHHHHHHHHHHHHHHHTTTCSCEEEEEECCCSSSCBCSCBHHHH
T ss_pred HHHHHHHhcCcccCCCeEEEEecCCCccccccCCC-cHHHHHHHHHHHHHHHcCCCCCEEEEEECCCCCcccCCCCHHHH
Confidence 45544443211 1 233334555432111111 12345555555566666654 4455654 35577
Q ss_pred HHHHHHhCCCCCCcEEEEecC
Q psy4448 155 IEIMKEYAPKLPRKGVIHSFD 175 (487)
Q Consensus 155 l~iLk~~~~~~~~~~v~H~Fs 175 (487)
++-| +.+. .++++=+.+
T Consensus 260 l~~L-~~G~---k~vvVvP~g 276 (362)
T 1lbq_A 260 AEFL-GPKV---DGLMFIPIA 276 (362)
T ss_dssp HHHH-GGGC---SCEEEECTT
T ss_pred HHHH-HcCC---CeEEEECCe
Confidence 7777 5544 256665543
No 269
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=31.49 E-value=91 Score=28.71 Aligned_cols=87 Identities=10% Similarity=0.025 Sum_probs=45.3
Q ss_pred HhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHH
Q psy4448 53 EDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQ 132 (487)
Q Consensus 53 ~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~q 132 (487)
.+++..++.+++.+. -++.+.+....... .+...+.+.+.+.++.=++.+++ .++++.. .....+...+.+++.
T Consensus 16 ~~~~~~l~~~~~~G~--~~vEl~~~~~~~~~--~~~~~~~~~~~l~~~gl~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~ 89 (281)
T 3u0h_A 16 TSLVLYLDLARETGY--RYVDVPFHWLEAEA--ERHGDAAVEAMFQRRGLVLANLG-LPLNLYD-SEPVFLRELSLLPDR 89 (281)
T ss_dssp CCHHHHHHHHHHTTC--SEECCCHHHHHHHH--HHHCHHHHHHHHHTTTCEECCEE-CCSCTTS-CHHHHHHHHHTHHHH
T ss_pred CCHHHHHHHHHHcCC--CEEEecHHHHHHHh--cccCHHHHHHHHHHcCCceEEec-ccccccC-CCHHHHHHHHHHHHH
Confidence 356677777777652 22333221110000 12336778888877422233333 3333321 101123345678999
Q ss_pred HHHhhhCCCCEEE
Q psy4448 133 LDLSVTHKLPLFL 145 (487)
Q Consensus 133 L~LA~el~lPViI 145 (487)
+++|.++|.+.++
T Consensus 90 i~~A~~lG~~~v~ 102 (281)
T 3u0h_A 90 ARLCARLGARSVT 102 (281)
T ss_dssp HHHHHHTTCCEEE
T ss_pred HHHHHHcCCCEEE
Confidence 9999999999765
No 270
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=31.28 E-value=3e+02 Score=24.96 Aligned_cols=57 Identities=14% Similarity=0.001 Sum_probs=31.6
Q ss_pred HHHHHHHHHHhhhCCCCEE-EEec-CchHHHHHHHHHhCCCCCCcEEEEecC------CCHHHHHHHHc
Q psy4448 126 LKYFRKQLDLSVTHKLPLF-LHCR-NAKSDFIEIMKEYAPKLPRKGVIHSFD------GTPFQAVDSLK 186 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPVi-IH~r-~a~~d~l~iLk~~~~~~~~~~v~H~Fs------G~~~~a~~~l~ 186 (487)
.+.+++.+++|.++|.+.+ +|.. +...++.++.++++. +..+|.-. .+.+.+.++++
T Consensus 88 ~~~~~~~i~~A~~lGa~~v~~~p~~~~l~~l~~~a~~~gv----~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 88 EEEIDRAFDYAKRVGVKLIVGVPNYELLPYVDKKVKEYDF----HYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEECGGGHHHHHHHHHHHTC----EEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCEEEecCCHHHHHHHHHHHHHcCC----EEEEecCCCcccccCCHHHHHHHHH
Confidence 4567777777777777644 4432 345566666666643 44554331 34555555443
No 271
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=30.37 E-value=3.8e+02 Score=26.33 Aligned_cols=138 Identities=13% Similarity=0.146 Sum_probs=77.7
Q ss_pred hcCCCEEEEEC----CCHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHh-cCCCEEEEEeeCCC
Q psy4448 39 NAGLEKIIVTG----TNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKE-GGKKVVAFGEFGLD 113 (487)
Q Consensus 39 ~~GV~~ii~v~----~~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~-~~~~vvaIGEIGLD 113 (487)
+.||..-++++ .++++....++++.+++....++|+--.... . ..+. +..+.+.+.+ .-+-.+-.||.|-+
T Consensus 131 ~~gi~~~lI~~~~R~~~~~~a~~~l~~a~~~~~~vvG~dL~g~E~~-~--~~~~-~~~~~~~A~~~gl~~~~HagE~~~~ 206 (343)
T 3rys_A 131 DFGVSTLLIAAFLRDMSEDSALEVLDQLLAMHAPIAGIGLDSAEVG-N--PPSK-FERLYQRAAEAGLRRIAHAGEEGPA 206 (343)
T ss_dssp HHSCEEEEEEEEETTSCHHHHHHHHHHHHHTTCCCCEEEEESCCTT-C--CGGG-GHHHHHHHHHTTCEEEEEESSSSCH
T ss_pred cCceeEEEEEEeCCCCCHHHHHHHHHHHHhCCCCEEEEecCCcccC-C--CHHH-HHHHHHHHHHCCCeEEEeeCCCCCH
Confidence 34765433333 3567788888888888876677777432221 1 1222 3333334443 21235677888621
Q ss_pred CCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchH--HHHHHHHHhCCCCCCcEEEEecCCCHHH----------H
Q psy4448 114 YDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKS--DFIEIMKEYAPKLPRKGVIHSFDGTPFQ----------A 181 (487)
Q Consensus 114 ~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~--d~l~iLk~~~~~~~~~~v~H~FsG~~~~----------a 181 (487)
+ . ....++ .++---+-|+....+ ++++.|++.+. .+-||-+.+... +
T Consensus 207 ---------~---~-i~~al~---~lg~~rIgHgv~l~~d~~l~~~l~~~~i-----~le~cP~SN~~l~~~~~~~~hPi 265 (343)
T 3rys_A 207 ---------S---Y-ITEALD---VLHVERIDHGIRCMEDTDVVQRLVAEQV-----PLTVCPLSNVRLRAVDKLADHPL 265 (343)
T ss_dssp ---------H---H-HHHHHH---TSCCSEEEECGGGGGCHHHHHHHHHHTC-----CEEECHHHHHHTTSSSCGGGCSH
T ss_pred ---------H---H-HHHHHh---cCCcceeeeeeeecCChHHHHHHHhcCC-----CeeEchhHHHHhCCCCCcccchH
Confidence 1 1 112222 244456889999864 79999988753 578885544321 2
Q ss_pred HHHHcCccchhHhhhcCCCceeeccCCCCCC
Q psy4448 182 VDSLKTKENLETVKSIPEDRLLLETDCPWCE 212 (487)
Q Consensus 182 ~~~l~~~~g~e~v~~iP~driLlETD~P~l~ 212 (487)
+++++. |. ++-|-||.|-..
T Consensus 266 ~~ll~~--Gv---------~V~l~TDdp~~~ 285 (343)
T 3rys_A 266 PEMLAI--GL---------NVCVNSDDPAYF 285 (343)
T ss_dssp HHHHHT--TC---------CEEECCBSTTTT
T ss_pred HHHHHC--CC---------eEEEeCCCcccc
Confidence 334444 33 578999998653
No 272
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=30.36 E-value=1.2e+02 Score=29.53 Aligned_cols=61 Identities=8% Similarity=0.120 Sum_probs=32.2
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCch------HHHHHHHHHhCCCCCCcEEEEecC-CCHHHHHHHHcC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAK------SDFIEIMKEYAPKLPRKGVIHSFD-GTPFQAVDSLKT 187 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~------~d~l~iLk~~~~~~~~~~v~H~Fs-G~~~~a~~~l~~ 187 (487)
+..+..++.|.+.+-||||-.-... +.+..+++......+.++++|-=- .+.+.++++++.
T Consensus 29 e~~~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~ 96 (286)
T 1gvf_A 29 ETIQAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHA 96 (286)
T ss_dssp HHHHHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHc
Confidence 4566777777777778777664422 222232222111111245554322 257777777777
No 273
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=30.15 E-value=1.3e+02 Score=30.59 Aligned_cols=13 Identities=15% Similarity=0.256 Sum_probs=9.1
Q ss_pred hhhHHHHHHHHHh
Q psy4448 87 EGYLQSLDKIIKE 99 (487)
Q Consensus 87 ~~~l~~L~~ll~~ 99 (487)
.+++..|.++.++
T Consensus 100 ~e~~~~L~~~~~~ 112 (385)
T 1vli_A 100 AEWILPLLDYCRE 112 (385)
T ss_dssp GGGHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4667788887764
No 274
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=29.84 E-value=1.1e+02 Score=29.60 Aligned_cols=39 Identities=8% Similarity=0.118 Sum_probs=28.1
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 62 s~eEr~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~ 101 (303)
T 2wkj_A 62 SLSEREQVLEIVAEEAKG-KIKLIAHVGCVSTAESQQLAAS 101 (303)
T ss_dssp CHHHHHHHHHHHHHHHTT-TSEEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEecCCCCHHHHHHHHHH
Confidence 467788888888887764 6888888865 45666666544
No 275
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=29.70 E-value=71 Score=31.50 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=48.1
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc--hHHHHHHHHHhCCCCCCcEEEEecCCC--
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA--KSDFIEIMKEYAPKLPRKGVIHSFDGT-- 177 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a--~~d~l~iLk~~~~~~~~~~v~H~FsG~-- 177 (487)
+.++|||=.|=.. ..++ +-|++.++.|++.|+|+.+|+-.. .+.+.+.+...+. ..|-|+..-.
T Consensus 160 ~~vvG~dL~g~E~---~~~~-----~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~----~rigHgv~l~~d 227 (326)
T 3pao_A 160 DAFIAVGLDSSEV---GHPP-----SKFQRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKV----ERIDHGVRAFED 227 (326)
T ss_dssp GGCSEEEEESCCT---TCCG-----GGGHHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCC----SSEEECGGGGGC
T ss_pred ccceeeCCCCCCC---CCCH-----HHHHHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCC----ceeeeeeeeccc
Confidence 4577776555442 1221 246778899999999999999764 3455555644443 3478997655
Q ss_pred HHHHHHHHcC
Q psy4448 178 PFQAVDSLKT 187 (487)
Q Consensus 178 ~~~a~~~l~~ 187 (487)
++.++.+.+.
T Consensus 228 ~~l~~~l~~~ 237 (326)
T 3pao_A 228 ERLMRRLIDE 237 (326)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 6677666655
No 276
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=29.51 E-value=1.2e+02 Score=29.37 Aligned_cols=40 Identities=10% Similarity=0.122 Sum_probs=27.9
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEec-CchHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCR-NAKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r-~a~~d~l~iLk~~ 161 (487)
+.+..+++++...+.+.. +.||+.|+- ....+++++.+..
T Consensus 66 t~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 106 (304)
T 3l21_A 66 TDGEKIELLRAVLEAVGD-RARVIAGAGTYDTAHSIRLAKAC 106 (304)
T ss_dssp CHHHHHHHHHHHHHHHTT-TSEEEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEeCCCCCHHHHHHHHHHH
Confidence 467778888888887754 678888875 3566666666543
No 277
>3nco_A Endoglucanase fncel5A; fncel5A, F. nodosum RT17-B1, hydrolase; 1.50A {Fervidobacterium nodosum} PDB: 3rjx_A 3rjy_A*
Probab=29.40 E-value=1.1e+02 Score=29.17 Aligned_cols=52 Identities=15% Similarity=0.202 Sum_probs=37.6
Q ss_pred HHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 93 LDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 93 L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
+.++..++ +.-+.|||.|... ..+.+.|.+.++.+++++.+.+.+-.+.+-+
T Consensus 245 ~~~~~~~~-g~Pv~igEfG~~~----~~~~~~~~~~~~~~~~~~~~~gi~~~~W~~~ 296 (320)
T 3nco_A 245 VSEWAKKN-NVPIFLGEFGAYS----KADMESRVKWTKTVRRIAEEFGFSLAYWEFC 296 (320)
T ss_dssp HHHHHHHH-TCCEEEEEECCCT----TSCHHHHHHHHHHHHHHHHHTTCEEEESCSS
T ss_pred HHHHHHHc-CCCEEEeeeeeec----CCCHHHHHHHHHHHHHHHHHcCCeEEEEecC
Confidence 33334433 4568999999863 2356778899999999999998887776543
No 278
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=29.40 E-value=4.5e+02 Score=26.39 Aligned_cols=57 Identities=9% Similarity=0.113 Sum_probs=39.5
Q ss_pred hhHHHHHHHHHhcCCCEEEEEeeCCCCCC---CCCCChHHHHHHHHHHHHHhhhCCCCEEEE
Q psy4448 88 GYLQSLDKIIKEGGKKVVAFGEFGLDYDR---VQYCPVETQLKYFRKQLDLSVTHKLPLFLH 146 (487)
Q Consensus 88 ~~l~~L~~ll~~~~~~vvaIGEIGLD~~~---~~~~~~e~Q~~vF~~qL~LA~el~lPViIH 146 (487)
+.++.+.+.++++ +--+.+.|. +..+. .....++..++.|++.|++|.+++.+++.-
T Consensus 64 ~~i~~lk~~l~~~-GL~i~~i~s-~~~~~~i~~~~~~r~~~ie~~k~~i~~aa~lGi~~v~~ 123 (386)
T 3bdk_A 64 ENILELKKMVEEA-GLEITVIES-IPVHEDIKQGKPNRDALIENYKTSIRNVGAAGIPVVCY 123 (386)
T ss_dssp HHHHHHHHHHHTT-TCEEEEEEC-CCCCHHHHTTCTTHHHHHHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHc-CCEEEEEec-cccccccccCcHHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 4577888888774 222333343 44331 123557889999999999999999998875
No 279
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=29.17 E-value=3.8e+02 Score=25.44 Aligned_cols=37 Identities=19% Similarity=0.156 Sum_probs=25.7
Q ss_pred HHHHHHHHHHhhhCCCCEEEEecC--------chHHHHHHHHHhC
Q psy4448 126 LKYFRKQLDLSVTHKLPLFLHCRN--------AKSDFIEIMKEYA 162 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPViIH~r~--------a~~d~l~iLk~~~ 162 (487)
.+.+++..++|++.|+.+.||... ..+++.+++++.+
T Consensus 163 ~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~t~~~~~~ll~~v~ 207 (335)
T 2qw5_A 163 QPILDKLGEYAEIKKVKLAIEPITHWETPGPNKLSQLIEFLKGVK 207 (335)
T ss_dssp HHHHHHHHHHHHHHTCEEEECCCCTTTCSSCCSHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCEEEEeeCCcccccccCCHHHHHHHHHhcC
Confidence 456777778888888888887742 3456777776554
No 280
>1qnr_A Endo-1,4-B-D-mannanase; hydrolase, anomalous scattering; HET: NAG MAB; 1.4A {Trichoderma reesei} SCOP: c.1.8.3 PDB: 1qno_A* 1qnq_A* 1qnp_A* 1qns_A*
Probab=29.07 E-value=3.6e+02 Score=25.52 Aligned_cols=21 Identities=29% Similarity=0.260 Sum_probs=16.6
Q ss_pred CCHHHHHHHHHhcCCCEEEEE
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v 48 (487)
..++.+++.|.+.|+.-++.+
T Consensus 90 ~~ld~~i~~a~~~Gi~vild~ 110 (344)
T 1qnr_A 90 QTLDYVVQSAEQHNLKLIIPF 110 (344)
T ss_dssp HHHHHHHHHHHHHTCEEEEES
T ss_pred HHHHHHHHHHHHCCCEEEEEe
Confidence 456899999999999755554
No 281
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=28.99 E-value=99 Score=29.77 Aligned_cols=39 Identities=10% Similarity=0.108 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 52 s~~Er~~v~~~~~~~~~g-r~pvi~Gvg~~~t~~ai~la~~ 91 (291)
T 3a5f_A 52 TETERKETIKFVIDKVNK-RIPVIAGTGSNNTAASIAMSKW 91 (291)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCEEEECCCSSHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEeCCcccHHHHHHHHHH
Confidence 457788888888887764 6888888865 45666666654
No 282
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=28.98 E-value=4.2e+02 Score=25.96 Aligned_cols=84 Identities=13% Similarity=0.208 Sum_probs=40.2
Q ss_pred CCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEE-eeCCCCCCCCCCChHH--HHHHHHHHHH-HhhhCCC
Q psy4448 66 ERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFG-EFGLDYDRVQYCPVET--QLKYFRKQLD-LSVTHKL 141 (487)
Q Consensus 66 ~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIG-EIGLD~~~~~~~~~e~--Q~~vF~~qL~-LA~el~l 141 (487)
|.|..-+-+-|..-.+...+.+..++..++++++. -.++=|| |-+.+........... +.+-+...++ |....+.
T Consensus 28 ~~vMGIlNvTpDSFsd~~~~~~~al~~A~~~v~~G-AdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~v 106 (314)
T 3tr9_A 28 PAVMGIINVSPNSFYHPHLDLNSALRTAEKMVDEG-ADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQ 106 (314)
T ss_dssp CEEEEEEECSTTCSBCBCCSHHHHHHHHHHHHHTT-CSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCS
T ss_pred cEEEEEEeCCCCchhhccCCHHHHHHHHHHHHHCC-CCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCC
Confidence 44555555666443221112344566667777663 2344444 4444321100002222 2222333443 4455799
Q ss_pred CEEEEecCc
Q psy4448 142 PLFLHCRNA 150 (487)
Q Consensus 142 PViIH~r~a 150 (487)
||+|=+.++
T Consensus 107 pISIDT~~~ 115 (314)
T 3tr9_A 107 LISVDTSRP 115 (314)
T ss_dssp EEEEECSCH
T ss_pred eEEEeCCCH
Confidence 999999874
No 283
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=28.78 E-value=50 Score=33.58 Aligned_cols=36 Identities=17% Similarity=0.376 Sum_probs=31.3
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHhC
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYA 286 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~~ 286 (487)
+.+++.+++|+++|+||.+|+..+.+++...++.+.
T Consensus 209 ~~l~~~~~~A~~~g~~v~iH~~e~~~~~~~~~~~~g 244 (472)
T 4dzh_A 209 ANFERVRMLADQLDMPVHLHTHETAQEVADSVAQYG 244 (472)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHhC
Confidence 578999999999999999999998888877777653
No 284
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=28.57 E-value=52 Score=32.94 Aligned_cols=35 Identities=11% Similarity=0.124 Sum_probs=30.2
Q ss_pred HHHHHHHHHhhhCCCCEEEEeccchHHHHHHHHHh
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 285 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r~a~~~~l~il~~~ 285 (487)
+.+++.+++|+++|+|+.+|+....+++...++.+
T Consensus 202 ~~l~~~~~~A~~~g~~v~~H~~e~~~~~~~~~~~~ 236 (451)
T 4dyk_A 202 DKLEQILVLTEELDASIQMHVHETAFEVEQAMERN 236 (451)
T ss_dssp HHHHHHHHHHHHHTCCEEEEESCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCCCHHHHHHHHHHh
Confidence 57899999999999999999999887777766654
No 285
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=28.31 E-value=1.9e+02 Score=28.08 Aligned_cols=67 Identities=16% Similarity=0.200 Sum_probs=39.0
Q ss_pred HHHHHHH-HHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 90 LQSLDKI-IKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 90 l~~L~~l-l~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+..+-++ +......++..|-+|==+ .-+.+..+++++...+.+.. +.||+.|+-. ...+++++.+..
T Consensus 30 l~~lv~~li~~Gv~Gl~v~GtTGE~~----~Ls~~Er~~v~~~~~~~~~g-rvpViaGvg~~~t~~ai~la~~A 98 (311)
T 3h5d_A 30 IPALIEHLLAHHTDGILLAGTTAESP----TLTHDEELELFAAVQKVVNG-RVPLIAGVGTNDTRDSIEFVKEV 98 (311)
T ss_dssp HHHHHHHHHHTTCCCEEESSTTTTGG----GSCHHHHHHHHHHHHHHSCS-SSCEEEECCCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEECccccChh----hCCHHHHHHHHHHHHHHhCC-CCcEEEeCCCcCHHHHHHHHHHH
Confidence 4444333 443223455555555321 12457778888888877653 6888888764 566776666544
No 286
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=28.15 E-value=1.3e+02 Score=28.98 Aligned_cols=39 Identities=18% Similarity=0.228 Sum_probs=27.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHH
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKE 160 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~ 160 (487)
+.+..+++++...+.+.. +.||+.++-. ...+++++.+.
T Consensus 55 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~ 94 (293)
T 1f6k_A 55 STEEKKEIFRIAKDEAKD-QIALIAQVGSVNLKEAVELGKY 94 (293)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEECCCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCeEEEecCCCCHHHHHHHHHH
Confidence 457788888888887764 6888888865 45666665543
No 287
>2vun_A Enamidase; nicotinate degradation, binuclear metal center, amidohydrolases, stereospecificity, hydrolase; 1.89A {Eubacterium barkeri}
Probab=28.12 E-value=33 Score=33.57 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=75.0
Q ss_pred HHHHHHHHHhhhCCCCEEEEec------cchHHHHHHHHHhCCCCCCCcEEEEee----CCcccc---------cccc--
Q psy4448 251 VYFRKQLDLSVTHKLPLFLHCR------NAKSDFIEIMKEYAPKLPRKGVIHSFD----GTPFQA---------VDSL-- 309 (487)
Q Consensus 251 ~~F~~ql~lA~~~~lPl~iH~r------~a~~~~l~il~~~~~~~~~~gv~hsfs----G~~~~~---------~~~~-- 309 (487)
+.+++++++|+++|+|+.+|+. ...+++...++ ... ..+.|++. .+.+.. +..+
T Consensus 174 ~~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~i~~~~~-~G~----~~i~H~~~~~~~~~~~~~~~~~~~g~~vl~~~~ 248 (386)
T 2vun_A 174 EDAAPMVEWAHKHGFKVQMHTGGTSIPGSSTVTADDVIK-TKP----DVVSHINGGPTAISVQEVDRIMDETDFAMEIVQ 248 (386)
T ss_dssp HHHHHHHHHHHHTTCEEEEECSCCSCSTTCSCCHHHHHH-HCC----SEEETTTCSSSCCCHHHHHHHHHHCCCEEEEES
T ss_pred HHHHHHHHHHHHCCCeEEEecCCccccccCHHHHHHHHH-cCC----CEEEEccCCCCCCCHHHHHHHHHcCCeEEEecc
Confidence 4688999999999999999997 44445544443 322 24566554 221110 1011
Q ss_pred c--chh----hHHHhhhCCCCceEeccCCCCCCCCCCCcchhhHhhhhhhhhhhccCCccCCCCCCccccHHHHHHHHHH
Q psy4448 310 K--TKE----NLETVKSIPEDRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSRNEPANIVQILEIVAA 383 (487)
Q Consensus 310 k--~~~----~~e~v~~iPldrlLlETD~P~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~n~P~~l~~v~~~iA~ 383 (487)
. ... ..++++.-.+|++++.||+|... + .+.+..+...++.+.
T Consensus 249 ~g~~~~~~~~~~~~~~~g~~d~v~lgTD~p~~~--~----------------------------~~~~g~~~~~~~~~~- 297 (386)
T 2vun_A 249 CGNPKIADYVARRAAEKGQLGRVIFGNDAPSGT--G----------------------------LIPLGILRNMCQIAS- 297 (386)
T ss_dssp SSCHHHHHHHHHHHHHHTCGGGEEEECCBSBTT--B----------------------------BCTTHHHHHHHHHHH-
T ss_pred CCcccccHHHHHHHHHcCCCceeEEecCCCCCC--C----------------------------CCcchhHHHHHHHHh-
Confidence 0 111 12566777789999999997310 0 011223444444443
Q ss_pred hhCCCHHHHHHHHHHHHHHhcCC
Q psy4448 384 VRGVEREKLGPIIHQNTLRLFFP 406 (487)
Q Consensus 384 ikg~~~~~va~~~~~N~~rlf~~ 406 (487)
..+++.+++.+.++.|..++|++
T Consensus 298 ~~~ls~~~~~~~~T~n~A~~lgl 320 (386)
T 2vun_A 298 MSDIDPEVAVCMATGNSTAVYGL 320 (386)
T ss_dssp HSCCCHHHHHHHHTHHHHHHHTC
T ss_pred hcCCCHHHHHHHHhHHHHHHcCC
Confidence 36899999999999999999998
No 288
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A*
Probab=27.63 E-value=1e+02 Score=30.28 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=35.9
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
+.-+.|||.|.... .+.+.+.+.++.++++|++.+++-++=+-+.
T Consensus 265 g~pv~iGEfG~~~~----~~~~~~~~~~~~~~~~~~~~gi~~~~W~~g~ 309 (345)
T 3ndz_A 265 GRAVVIGEMGSINK----NNTAARVTHAEYYAKSAKARGLTPIWWDNGY 309 (345)
T ss_dssp TCCEEEEEECCCCS----SCHHHHHHHHHHHHHHHHTTTCEEEEEECSC
T ss_pred CCcEEEEeecCCCC----CCHHHHHHHHHHHHHHHHHCCCeEEEECCCC
Confidence 45689999999742 3456678899999999999999998887653
No 289
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=27.49 E-value=3.1e+02 Score=25.38 Aligned_cols=22 Identities=14% Similarity=-0.031 Sum_probs=17.4
Q ss_pred CCHHHHHHHHHhcCCCEEEEEC
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTG 49 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~ 49 (487)
.++++.++.+++.|++.+=+..
T Consensus 30 ~~~~~~l~~~~~~G~~~iEl~~ 51 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSV 51 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEEC
T ss_pred CCHHHHHHHHHhcCCCEEEEec
Confidence 5889999999999998765443
No 290
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=27.46 E-value=1.4e+02 Score=28.72 Aligned_cols=40 Identities=13% Similarity=0.196 Sum_probs=27.8
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEec-CchHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCR-NAKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r-~a~~d~l~iLk~~ 161 (487)
+.+..+++++..++.+. -+.||+.|+- ....+++++.+..
T Consensus 53 t~~Er~~v~~~~~~~~~-grvpviaGvg~~~t~~ai~la~~a 93 (292)
T 3daq_A 53 TTDEKELILKTVIDLVD-KRVPVIAGTGTNDTEKSIQASIQA 93 (292)
T ss_dssp CHHHHHHHHHHHHHHHT-TSSCEEEECCCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhC-CCCcEEEeCCcccHHHHHHHHHHH
Confidence 45778888888888775 3678888875 3566666666543
No 291
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=27.41 E-value=60 Score=32.26 Aligned_cols=72 Identities=6% Similarity=-0.074 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHhhhCCCCEEEEecCc--hHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCC
Q psy4448 123 ETQLKYFRKQLDLSVTHKLPLFLHCRNA--KSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPED 200 (487)
Q Consensus 123 e~Q~~vF~~qL~LA~el~lPViIH~r~a--~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~d 200 (487)
...-+++++.|+.+.. .+|++ -+... .++++++.++++.. =+++|. .+.+.++++++. ..-.-+|.+
T Consensus 141 T~~~eV~eaAleagag-~~~lI-Nsv~~~~~~~m~~laa~~g~~---vVlmh~--~d~~~~~~l~~~----a~~~GI~~e 209 (323)
T 4djd_D 141 EKDHEVLEAVAEAAAG-ENLLL-GNAEQENYKSLTAACMVHKHN---IIARSP--LDINICKQLNIL----INEMNLPLD 209 (323)
T ss_dssp HHHHHHHHHHHHHTTT-SCCEE-EEEBTTBCHHHHHHHHHHTCE---EEEECS--SCHHHHHHHHHH----HHTTTCCGG
T ss_pred CCCHHHHHHHHHhcCC-CCCeE-EECCcccHHHHHHHHHHhCCe---EEEEcc--chHHHHHHHHHH----HHHcCCCHH
Confidence 4456777777777542 12333 33333 36777888877642 245563 245555554432 011135668
Q ss_pred ceeec
Q psy4448 201 RLLLE 205 (487)
Q Consensus 201 riLlE 205 (487)
+|++-
T Consensus 210 ~IIlD 214 (323)
T 4djd_D 210 HIVID 214 (323)
T ss_dssp GEEEE
T ss_pred HEEEe
Confidence 88773
No 292
>4drs_A Pyruvate kinase; glycolysis, allosteric EN transferase; 2.50A {Cryptosporidium parvum} PDB: 3ma8_A*
Probab=27.07 E-value=26 Score=37.23 Aligned_cols=110 Identities=15% Similarity=0.124 Sum_probs=62.3
Q ss_pred CHHHHHHHHHhcCCCEEEEECC--CHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEE
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGT--NVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVA 106 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~--~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vva 106 (487)
|..+++.-+.+.|++.+. .++ +.++...+.++.++...-....+-+..-+.... ..+.++.|++++.....=.+|
T Consensus 217 D~~D~l~fa~~~~vD~ia-lSFVr~~~Dv~~~r~~l~~~g~~~~~~~~~i~IiaKIE--~~~av~NldeIi~~sDgIMVA 293 (526)
T 4drs_A 217 DRHDIVDFALKYNLDFIA-LSFVQNGADVQLCRQIISENTQYSNGIPSSIKIISKIE--NLEGVINFDSICSESDGIMVA 293 (526)
T ss_dssp HHHHHHHTTTTTTCSEEE-ETTCCSHHHHHHHHHHHHTCCTTTTTCCCCCEEEEEEC--SHHHHHTHHHHHHHSSEEEEE
T ss_pred hHHHHHHHHHHhccCeee-ecccCchhhHHHHHHHHHhhCcccccccccceeeeehh--ccHHHHHHHHHHhhccEEEEE
Confidence 555666777788998544 454 678888777776654321111111221122221 234567788888763222455
Q ss_pred EEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEe
Q psy4448 107 FGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHC 147 (487)
Q Consensus 107 IGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~ 147 (487)
=|..|+.... . .-...|+ +.++.|++.++||++=+
T Consensus 294 RGDLgvEip~-e-~vp~~QK----~II~~c~~~gKPVI~AT 328 (526)
T 4drs_A 294 RGDLGMEIPP-E-KIFVAQK----CMISKCNVAGKPVVTAT 328 (526)
T ss_dssp CTTHHHHSCG-G-GHHHHHH----HHHHHHHHHTCCEEEES
T ss_pred CCcccccCCH-H-HHHHHHH----HHHHHHHHcCCeEEEhh
Confidence 5777766421 1 1124564 56788999999999754
No 293
>3f2b_A DNA-directed DNA polymerase III alpha chain; DNA polymerase C, DNA polymerase III; HET: DGT; 2.39A {Geobacillus kaustophilus} PDB: 3f2c_A* 3f2d_A*
Probab=26.89 E-value=46 Score=38.35 Aligned_cols=55 Identities=15% Similarity=0.141 Sum_probs=37.1
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECC-CHHhHHHHHHHHhc
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGT-NVEDSISSLKLAQS 64 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~-~~~~~~~~~~la~~ 64 (487)
|+++|.|||.... | -.| ...+++++++|.+.|+..+.+.-- +...+....+.++.
T Consensus 114 ~~~vdLH~HT~~S-~---lDG-----~~~~~eLv~~A~~~G~~aiAITDH~~~~G~~~~~~~a~~ 169 (1041)
T 3f2b_A 114 EKRVELHLHTPMS-Q---MDA-----VTSVTKLIEQAKKWGHPAIAVTDHAVVQSFPEAYSAAKK 169 (1041)
T ss_dssp SCCCBCCBCCTTS-T---TTC-----CSCHHHHHHHHHHTTCSCEEECCBSCCTTHHHHHHHHHH
T ss_pred cceEEcccCCcCc-c---ccc-----cCCHHHHHHHHHHCCCCEEEEecccchhhHHHHHHHHHH
Confidence 6789999998753 1 123 678999999999999987665411 23444444444544
No 294
>3b40_A PVDM, probable dipeptidase; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=26.74 E-value=3.1e+02 Score=28.01 Aligned_cols=35 Identities=17% Similarity=0.246 Sum_probs=27.8
Q ss_pred ccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcC
Q psy4448 370 EPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFF 405 (487)
Q Consensus 370 ~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~ 405 (487)
.++.++.+.+.+.+ +|.+.+++..++..|+.|+|+
T Consensus 371 dvs~~p~l~~~L~~-rG~se~di~ki~ggN~lRVl~ 405 (417)
T 3b40_A 371 DVSEIRNVTAELIT-RGYSDADIAKLWGGNFLRAWG 405 (417)
T ss_dssp SGGGHHHHHHHHHH-HTCCHHHHHHHTTHHHHHHHH
T ss_pred CHHHHHHHHHHHHh-cCCCHHHHHHHHHHHHHHHHH
Confidence 45556666665543 799999999999999999984
No 295
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=26.73 E-value=3.7e+02 Score=24.54 Aligned_cols=134 Identities=11% Similarity=0.049 Sum_probs=71.7
Q ss_pred CCHHHHHHHHHhcCCCEEEEECCCH-----HhHHHHHHHHhcCCCeEEEe-ecCCCCCCCcCCCc---hhhHHHHHHHH-
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGTNV-----EDSISSLKLAQSDERLYSTV-GCHPTRCSEFENDP---EGYLQSLDKII- 97 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~~~-----~~~~~~~~la~~~~~v~~av-GiHP~~~~~~~~~~---~~~l~~L~~ll- 97 (487)
.++++.++.+++.|++.+=+....+ .+...+.+++++++--..++ ++ |....-...+. +..++.+++.+
T Consensus 17 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-~~~~~l~~~d~~~r~~~~~~~~~~i~ 95 (290)
T 2qul_A 17 VDFPATAKRIAGLGFDLMEISLGEFHNLSDAKKRELKAVADDLGLTVMCCIGL-KSEYDFASPDKSVRDAGTEYVKRLLD 95 (290)
T ss_dssp CCHHHHHHHHHHTTCSEEEEESTTGGGSCHHHHHHHHHHHHHHTCEEEEEEEE-CGGGCTTCSCHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCEEEEecCCccccchhhHHHHHHHHHHcCCceEEecCC-CCCCCCCCCCHHHHHHHHHHHHHHHH
Confidence 5789999999999999765554443 44566666666665322222 21 21111011111 11123333332
Q ss_pred --HhcCCCEEEEEee----CCCCCCCCCC---ChHHHHHHHHHHHHHhhhCCCCEEEEecC--------chHHHHHHHHH
Q psy4448 98 --KEGGKKVVAFGEF----GLDYDRVQYC---PVETQLKYFRKQLDLSVTHKLPLFLHCRN--------AKSDFIEIMKE 160 (487)
Q Consensus 98 --~~~~~~vvaIGEI----GLD~~~~~~~---~~e~Q~~vF~~qL~LA~el~lPViIH~r~--------a~~d~l~iLk~ 160 (487)
..-..+.+. |-+ |.|.+..... .++.-.+.|++..+.|+++|..+.||.-. ..+++.+++++
T Consensus 96 ~a~~lG~~~v~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~ 174 (290)
T 2qul_A 96 DCHLLGAPVFA-GLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDYGIIYALEVVNRFEQWLCNDAKEAIAFADA 174 (290)
T ss_dssp HHHHHTCSEEE-EEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHHTCEEEEECCCTTTCSSCCSHHHHHHHHHH
T ss_pred HHHHcCCCEEE-eeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCccccccccCCHHHHHHHHHH
Confidence 221122222 333 6542210111 13345567788888999999999999643 35678888877
Q ss_pred hCC
Q psy4448 161 YAP 163 (487)
Q Consensus 161 ~~~ 163 (487)
.+.
T Consensus 175 ~~~ 177 (290)
T 2qul_A 175 VDS 177 (290)
T ss_dssp HCC
T ss_pred cCC
Confidence 753
No 296
>2f46_A Hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.41A {Neisseria meningitidis Z2491}
Probab=26.50 E-value=33 Score=29.70 Aligned_cols=14 Identities=21% Similarity=0.612 Sum_probs=10.3
Q ss_pred hCCCCEEEEecCch
Q psy4448 138 THKLPLFLHCRNAK 151 (487)
Q Consensus 138 el~lPViIH~r~a~ 151 (487)
+.+.||.+||+...
T Consensus 100 ~~~~pVlvHC~sG~ 113 (156)
T 2f46_A 100 QAEYPVLAYCRTGT 113 (156)
T ss_dssp TSCSSEEEECSSSH
T ss_pred hCCCCEEEECCCCC
Confidence 45778888888765
No 297
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=26.49 E-value=4e+02 Score=24.86 Aligned_cols=40 Identities=10% Similarity=0.145 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHhhhCCCCEEEEecC--------chHHHHHHHHHhC
Q psy4448 123 ETQLKYFRKQLDLSVTHKLPLFLHCRN--------AKSDFIEIMKEYA 162 (487)
Q Consensus 123 e~Q~~vF~~qL~LA~el~lPViIH~r~--------a~~d~l~iLk~~~ 162 (487)
+.-.+.|++..++|+++|..+.||.-. ..+++.+++++.+
T Consensus 147 ~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~~l~~~v~ 194 (309)
T 2hk0_A 147 ARGVEGINGIADFANDLGINLCIEVLNRFENHVLNTAAEGVAFVKDVG 194 (309)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECCCTTTCSSCCSHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEeecccccccccCCHHHHHHHHHHcC
Confidence 344566777778888888888887753 3456777777664
No 298
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=26.37 E-value=3.8e+02 Score=24.62 Aligned_cols=56 Identities=18% Similarity=0.318 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCc-------hHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHc
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNA-------KSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK 186 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a-------~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~ 186 (487)
--|+..|+++...+..+.|=.... .+.+++++++++.. .++++-+|+ .+.++.+-+
T Consensus 100 PtL~evL~~~~~~~~~l~iEiK~~~~~~~~~~~~v~~~l~~~~~~--~~vii~SF~--~~~l~~~~~ 162 (252)
T 2pz0_A 100 PTLYEVFELIGDKDFLVNIEIKSGIVLYPGIEEKLIKAIKEYNFE--ERVIISSFN--HYSLRDVKK 162 (252)
T ss_dssp CBHHHHHHHHTTSCCEEEEEECCSSCCCTTHHHHHHHHHHHTTCT--TTEEEEESB--HHHHHHHHH
T ss_pred CCHHHHHHHhhhcCCeEEEEeCCCCcccHHHHHHHHHHHHhcCCC--CCEEEEeCC--HHHHHHHHH
Confidence 346777777776677777766542 36788999888643 368888885 444444433
No 299
>2z00_A Dihydroorotase; zinc binding protein, hydrolase, metal-binding, pyrimidine biosynthesis, structural genomics, NPPSFA; 2.42A {Thermus thermophilus}
Probab=26.23 E-value=34 Score=33.95 Aligned_cols=40 Identities=10% Similarity=0.070 Sum_probs=32.0
Q ss_pred CCccccHHHHHHHHHHhhCCCHHHHHHHHHHHHHHhcCCC
Q psy4448 368 RNEPANIVQILEIVAAVRGVEREKLGPIIHQNTLRLFFPH 407 (487)
Q Consensus 368 ~n~P~~l~~v~~~iA~ikg~~~~~va~~~~~N~~rlf~~~ 407 (487)
.+.+..+..++..+....+++++++.+.++.|..++|++.
T Consensus 327 ~~~~~~~~~~~~~~~~~~~ls~~~~l~~~T~n~A~~lgl~ 366 (426)
T 2z00_A 327 PSLEVAFPLLYTELHLKRGFPLQRLVELFTDGPRRVLGLP 366 (426)
T ss_dssp CCTTTHHHHHHHHTHHHHCCCHHHHHHHHTHHHHHHHTCC
T ss_pred ccHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhHHHHhCCC
Confidence 3455566666666666678999999999999999999985
No 300
>1jak_A Beta-N-acetylhexosaminidase; glycoside hydrolase, family 20, substrate-assisted catalysis, alpha/beta barrel, isofagomin inhibitor complex; HET: IFG; 1.75A {Streptomyces plicatus} SCOP: c.1.8.6 d.92.2.1 PDB: 1hp4_A* 1hp5_A* 1m01_A* 1m04_A* 1m03_A*
Probab=26.17 E-value=2.2e+02 Score=29.80 Aligned_cols=137 Identities=12% Similarity=0.129 Sum_probs=74.2
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECCC-HHhHHHHHHHHhcCCC---------eEEEeecCCCCCCCcCCCchhhHHHHHHH
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGTN-VEDSISSLKLAQSDER---------LYSTVGCHPTRCSEFENDPEGYLQSLDKI 96 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~~-~~~~~~~~~la~~~~~---------v~~avGiHP~~~~~~~~~~~~~l~~L~~l 96 (487)
..++.++++-|++.||+- ++-.| |......+. .||. ++.+.++++.... ...++.++.++++
T Consensus 230 ~~di~eiv~yA~~rgI~V--IPEID~PGH~~a~l~---aypeL~~~~~~~~~~~~~~~~~~~l~---~~~~~t~~fl~~v 301 (512)
T 1jak_A 230 KAEYKEIVRYAASRHLEV--VPEIDMPGHTNAALA---SYAELNCDGVAPPLYTGTKVGFSSLC---VDKDVTYDFVDDV 301 (512)
T ss_dssp HHHHHHHHHHHHHTTCEE--EEECCCSSSCHHHHH---HCGGGSTTSCCCCCCCSCCCSCCCCC---TTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCEE--EEccCCCchHHHHHH---hCHHhcCcCCCCccccccCcCCcccC---CCCHHHHHHHHHH
Confidence 367889999999999963 33332 333333332 1222 2333333322111 0113344444444
Q ss_pred HHh----cCCCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEE
Q psy4448 97 IKE----GGKKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIH 172 (487)
Q Consensus 97 l~~----~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H 172 (487)
+.+ .+.+.+-|| -|=.. ....+.|...+.+..++.++.|+.+++ ++|++. . ..+...++.
T Consensus 302 ~~Ev~~lFp~~~iHiG---gDE~~--~~~~~l~~~f~~~v~~~v~~~Gk~~i~-----W~d~~~-----~-~l~~~~~v~ 365 (512)
T 1jak_A 302 IGELAALTPGRYLHIG---GDEAH--STPKADFVAFMKRVQPIVAKYGKTVVG-----WHQLAG-----A-EPVEGALVQ 365 (512)
T ss_dssp HHHHHHTCCSSEEECC---CCCCT--TSCHHHHHHHHHHHHHHHHHTTCEEEE-----EGGGGG-----S-CCCTTCEEE
T ss_pred HHHHHHhCCCCeEEEC---Ccccc--cchHHHHHHHHHHHHHHHHhcCCeEEE-----eccccc-----c-CCCCCeEEE
Confidence 433 445666665 33222 124578999999999999999987663 444432 1 122345666
Q ss_pred ecCCC------HHHHHHHHcC
Q psy4448 173 SFDGT------PFQAVDSLKT 187 (487)
Q Consensus 173 ~FsG~------~~~a~~~l~~ 187 (487)
.+++. .+.+.++.+.
T Consensus 366 ~W~~~~~~~~~~~~~~~~~~~ 386 (512)
T 1jak_A 366 YWGLDRTGDAEKAEVAEAARN 386 (512)
T ss_dssp ECCCTTSCHHHHHHHHHHHHT
T ss_pred EcCCCCCcccchHHHHHHHHC
Confidence 66654 4667777776
No 301
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=26.00 E-value=1.3e+02 Score=27.70 Aligned_cols=50 Identities=16% Similarity=0.269 Sum_probs=35.7
Q ss_pred CHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCCCC
Q psy4448 29 DIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTRCS 80 (487)
Q Consensus 29 d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~~~ 80 (487)
.++.+++||++.||.++|+.+++=+.-..+++..+ .--..+++-|..+..
T Consensus 31 tl~la~era~e~~Ik~iVVAS~sG~TA~k~~e~~~--~i~lVvVTh~~GF~~ 80 (201)
T 1vp8_A 31 TLRLAVERAKELGIKHLVVASSYGDTAMKALEMAE--GLEVVVVTYHTGFVR 80 (201)
T ss_dssp HHHHHHHHHHHHTCCEEEEECSSSHHHHHHHHHCT--TCEEEEEECCTTSSS
T ss_pred HHHHHHHHHHHcCCCEEEEEeCCChHHHHHHHHhc--CCeEEEEeCcCCCCC
Confidence 34556788889999999999998888877777651 112557776665543
No 302
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=25.92 E-value=3.7e+02 Score=24.30 Aligned_cols=111 Identities=11% Similarity=0.006 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHhcCCCEEEEECC------CHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcC
Q psy4448 28 PDIDHVLNRAWNAGLEKIIVTGT------NVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGG 101 (487)
Q Consensus 28 ~d~~~vl~ra~~~GV~~ii~v~~------~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~ 101 (487)
.++++.++.+++.|++.+=+... ++++.+.+.++.++++--..+ +||.... ..+.++..-+++..-.
T Consensus 30 ~~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~--~~~~~~~-----~~~~~~~~i~~A~~lG 102 (257)
T 3lmz_A 30 FDLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYA--VGPIYMK-----SEEEIDRAFDYAKRVG 102 (257)
T ss_dssp SCHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEE--EEEEEEC-----SHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEE--EeccccC-----CHHHHHHHHHHHHHhC
Confidence 58999999999999987644432 456667777777777643333 3443221 1122222222222211
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC-------chHHHHHHHHH
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN-------AKSDFIEIMKE 160 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~-------a~~d~l~iLk~ 160 (487)
-+.+.+ ..| .+.|++..++|+++|..+.||.-. ..++++++++.
T Consensus 103 a~~v~~-~p~--------------~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~~ 153 (257)
T 3lmz_A 103 VKLIVG-VPN--------------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTKD 153 (257)
T ss_dssp CSEEEE-EEC--------------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHTT
T ss_pred CCEEEe-cCC--------------HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHHh
Confidence 223322 322 246788999999999999999883 35678888864
No 303
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=25.90 E-value=1.4e+02 Score=28.96 Aligned_cols=40 Identities=13% Similarity=0.227 Sum_probs=28.2
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecC-chHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRN-AKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~-a~~d~l~iLk~~ 161 (487)
+.+..+++++..++.+.. +.||+.++-. ...+++++.+..
T Consensus 55 s~~Er~~v~~~~~~~~~g-rvpviaGvg~~~t~~ai~la~~a 95 (300)
T 3eb2_A 55 GTAQREAVVRATIEAAQR-RVPVVAGVASTSVADAVAQAKLY 95 (300)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSCBEEEEEESSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEeCCCCCHHHHHHHHHHH
Confidence 457788888888888753 6788888753 566666666543
No 304
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=25.46 E-value=2e+02 Score=27.48 Aligned_cols=105 Identities=14% Similarity=0.124 Sum_probs=0.0
Q ss_pred CchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHH-------------HHHHHHHHHhhh-CCCCEEEEecCc
Q psy4448 85 DPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQL-------------KYFRKQLDLSVT-HKLPLFLHCRNA 150 (487)
Q Consensus 85 ~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~-------------~vF~~qL~LA~e-l~lPViIH~r~a 150 (487)
+.+.+.+.+..+.+. .+-+| |+|+.|+-.-....-.|. .+|+..=++-.+ .+.|+++-+--.
T Consensus 30 ~~~~~~~~~~~l~~~---GaD~i-ElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~n 105 (267)
T 3vnd_A 30 SPELSLKIIQTLVDN---GADAL-ELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYAN 105 (267)
T ss_dssp CHHHHHHHHHHHHHT---TCSSE-EEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHH
T ss_pred CHHHHHHHHHHHHHc---CCCEE-EECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCc
Q ss_pred h------HHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcCccchhHhhhcCCCceee
Q psy4448 151 K------SDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKTKENLETVKSIPEDRLLL 204 (487)
Q Consensus 151 ~------~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~~~g~e~v~~iP~driLl 204 (487)
. +.+++-+++.+.. ..++| .-..+++..+.+. ++...++.|++
T Consensus 106 pv~~~g~e~f~~~~~~aGvd---gvii~--Dlp~ee~~~~~~~------~~~~gl~~i~l 154 (267)
T 3vnd_A 106 LVFANGIDEFYTKAQAAGVD---SVLIA--DVPVEESAPFSKA------AKAHGIAPIFI 154 (267)
T ss_dssp HHHHHCHHHHHHHHHHHTCC---EEEET--TSCGGGCHHHHHH------HHHTTCEEECE
T ss_pred HHHHhhHHHHHHHHHHcCCC---EEEeC--CCCHhhHHHHHHH------HHHcCCeEEEE
No 305
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=25.40 E-value=1.5e+02 Score=29.63 Aligned_cols=23 Identities=35% Similarity=0.463 Sum_probs=13.7
Q ss_pred HHHHHHHhcCCCEEEEECCCHHh
Q psy4448 32 HVLNRAWNAGLEKIIVTGTNVED 54 (487)
Q Consensus 32 ~vl~ra~~~GV~~ii~v~~~~~~ 54 (487)
++++.|+++|.+.+=.-...+++
T Consensus 39 ~li~~ak~aGadavKfq~~k~~t 61 (349)
T 2wqp_A 39 EMVDAAYNAGAEVVKHQTHIVED 61 (349)
T ss_dssp HHHHHHHHHTCSEEEEEECCHHH
T ss_pred HHHHHHHHhCCCEEeeeeccccc
Confidence 46677777887754444444444
No 306
>3ib7_A ICC protein; metallophosphoesterase, alpha-beta fold, swapped-dimer, HYDR; HET: BTB; 1.60A {Mycobacterium tuberculosis} PDB: 3ib8_A* 2hy1_A 2hyp_A 2hyo_A
Probab=25.20 E-value=3.2e+02 Score=25.46 Aligned_cols=104 Identities=18% Similarity=0.187 Sum_probs=57.5
Q ss_pred CHHHHHHHHHh--cCCCEEEEECC-----CHHhHHHHHHHHhc-----CCCeEEEeecCCCCCCCcCCCchhhHHHHHHH
Q psy4448 29 DIDHVLNRAWN--AGLEKIIVTGT-----NVEDSISSLKLAQS-----DERLYSTVGCHPTRCSEFENDPEGYLQSLDKI 96 (487)
Q Consensus 29 d~~~vl~ra~~--~GV~~ii~v~~-----~~~~~~~~~~la~~-----~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~l 96 (487)
.++.+++.+.+ .+++.++..|- .++++..+.++.+. .-.++...|=|=.. ..+.+.
T Consensus 52 ~l~~~l~~i~~~~~~~d~vi~~GDl~~~~~~~~~~~~~~~l~~l~~~~~~pv~~v~GNHD~~------------~~~~~~ 119 (330)
T 3ib7_A 52 RLGELLEQLNQSGLRPDAIVFTGDLADKGEPAAYRKLRGLVEPFAAQLGAELVWVMGNHDDR------------AELRKF 119 (330)
T ss_dssp HHHHHHHHHHHHTCCCSEEEECSCCBTTCCHHHHHHHHHHHHHHHHHHTCEEEECCCTTSCH------------HHHHHH
T ss_pred HHHHHHHHHHhcCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHhhcCCCEEEeCCCCCCH------------HHHHHH
Confidence 46667888776 68887777654 24555555554432 12378888987321 112222
Q ss_pred HHhcC------------CCEEEEEeeCCCCCCC---CCCChHHHHHHHHHHHHHhhhCCCCEEEEe
Q psy4448 97 IKEGG------------KKVVAFGEFGLDYDRV---QYCPVETQLKYFRKQLDLSVTHKLPLFLHC 147 (487)
Q Consensus 97 l~~~~------------~~vvaIGEIGLD~~~~---~~~~~e~Q~~vF~~qL~LA~el~lPViIH~ 147 (487)
+.... +.+.. ++||-... .....+.|.++++.+|+-+.+...-|++|-
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~---i~lds~~~~~~~~~~~~~q~~wl~~~l~~~~~~~~iv~~Hh 182 (330)
T 3ib7_A 120 LLDEAPSMAPLDRVCMIDGLRI---IVLDTSVPGHHHGEIRASQLGWLAEELATPAPDGTILALHH 182 (330)
T ss_dssp HHCCCCCCSCCCEEEEETTEEE---EECCCCCTTCCSBCCCHHHHHHHHHHTTSCCTTCEEEECSS
T ss_pred hcccccccCCcceEEEeCCEEE---EEecCCCCCCCCCccCHHHHHHHHHHHHhcccCCeEEEEEC
Confidence 22100 12222 34553221 112347899999999987766555566665
No 307
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=24.71 E-value=4e+02 Score=24.30 Aligned_cols=88 Identities=10% Similarity=-0.035 Sum_probs=50.9
Q ss_pred hHHHHHHHHhcCCC--eEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeCCCCCCCCCCChHHHHHHHHH
Q psy4448 54 DSISSLKLAQSDER--LYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFGLDYDRVQYCPVETQLKYFRK 131 (487)
Q Consensus 54 ~~~~~~~la~~~~~--v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~ 131 (487)
++...++.+++.+. |=. .+.|+...... .....+.+.+++.++.=++.+++ ..++. . ....++...+.+++
T Consensus 16 ~~~~~l~~~~~~G~~~vEl-~~~~~~~~~~~---~~~~~~~~~~~l~~~gl~~~~~~-~~~~~-~-~~~~~~~~~~~~~~ 88 (286)
T 3dx5_A 16 SFTDIVQFAYENGFEGIEL-WGTHAQNLYMQ---EYETTERELNCLKDKTLEITMIS-DYLDI-S-LSADFEKTIEKCEQ 88 (286)
T ss_dssp CHHHHHHHHHHTTCCEEEE-EHHHHHHHHHH---CHHHHHHHHHHTGGGTCCEEEEE-CCCCC-S-TTSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCCEEEE-ccccccccccc---CHHHHHHHHHHHHHcCCeEEEEe-cCCCC-C-CchhHHHHHHHHHH
Confidence 57777888777653 211 12221001111 12456778888877433455553 11221 1 22345677889999
Q ss_pred HHHHhhhCCCCEE-EEec
Q psy4448 132 QLDLSVTHKLPLF-LHCR 148 (487)
Q Consensus 132 qL~LA~el~lPVi-IH~r 148 (487)
.+++|.++|.+.+ +|+-
T Consensus 89 ~i~~A~~lG~~~v~~~~g 106 (286)
T 3dx5_A 89 LAILANWFKTNKIRTFAG 106 (286)
T ss_dssp HHHHHHHHTCCEEEECSC
T ss_pred HHHHHHHhCCCEEEEcCC
Confidence 9999999999977 7864
No 308
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=24.64 E-value=2.3e+02 Score=26.99 Aligned_cols=26 Identities=19% Similarity=0.162 Sum_probs=21.7
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEec
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCR 272 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r 272 (487)
|.|..+++..-.+|...++||+|...
T Consensus 105 ~s~~~l~~~f~~va~a~~lPiilYn~ 130 (286)
T 2r91_A 105 LSERQIAKYFRDLCSAVSIPVFLYNY 130 (286)
T ss_dssp CCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 56778888888889999999999873
No 309
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=23.80 E-value=4.3e+02 Score=26.30 Aligned_cols=77 Identities=12% Similarity=-0.006 Sum_probs=48.8
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc--hHHHHHHHHHhCCCCCCcEEEEecCC--C
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA--KSDFIEIMKEYAPKLPRKGVIHSFDG--T 177 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a--~~d~l~iLk~~~~~~~~~~v~H~FsG--~ 177 (487)
+.++|||=.|=... .++. -..-|.+.++.|++.|+|+.+|+-.. .+.+.+.+...+. ..|=|++.- +
T Consensus 172 ~~vvG~dL~g~E~~---~~~~--~~~~f~~~f~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~----~RIgHgv~l~~d 242 (367)
T 3iar_A 172 QTVVAIDLAGDETI---PGSS--LLPGHVQAYQEAVKSGIHRTVHAGEVGSAEVVKEAVDILKT----ERLGHGYHTLED 242 (367)
T ss_dssp TTEEEEEEESCTTS---TTGG--GCHHHHHHHHHHHHHTCEEEEEESSSSCHHHHHHHHHTSCC----SEEEECGGGGGC
T ss_pred CCEEEEcCCCcccC---CCcc--hHHHHHHHHHHHHHcCCeeEEecCCcCChHHHHHHHHccCC----ceeeeeeeecCC
Confidence 45888877775432 1210 01346777778999999999999764 3445555544433 468899775 4
Q ss_pred HHHHHHHHcC
Q psy4448 178 PFQAVDSLKT 187 (487)
Q Consensus 178 ~~~a~~~l~~ 187 (487)
++.++.+.+.
T Consensus 243 ~~l~~~l~~~ 252 (367)
T 3iar_A 243 QALYNRLRQE 252 (367)
T ss_dssp HHHHHHHHHT
T ss_pred HHHHHHHHhC
Confidence 5666666655
No 310
>2hpi_A DNA polymerase III alpha subunit; POL-beta-like nucleotidyltransferase fold, transferase; HET: DNA; 3.00A {Thermus aquaticus} PDB: 2hpm_A* 3e0d_A*
Probab=23.68 E-value=97 Score=36.30 Aligned_cols=56 Identities=11% Similarity=0.155 Sum_probs=36.8
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHh--cCCCEEEEEC-CCHHhHHHHHHHHhcC
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWN--AGLEKIIVTG-TNVEDSISSLKLAQSD 65 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~--~GV~~ii~v~-~~~~~~~~~~~la~~~ 65 (487)
|+++|.|||....-. .| ...+++++++|++ .|...+.+.- .+........+.++..
T Consensus 5 ~~fvdLH~HT~~SlL----DG-----~~~~~elv~~A~~~~~G~~alAITDH~~~~G~~~f~~~a~~~ 63 (1220)
T 2hpi_A 5 LKFAHLHQHTQFSLL----DG-----AAKLQDLLKWVKETTPEDPALAMTDHGNLFGAVEFYKKATAM 63 (1220)
T ss_dssp CCCCCCSBCCTTSTT----TC-----CCCHHHHHHHHHHHCCSSCEEEEEEETCCTTHHHHHHHHHTT
T ss_pred CcEeEcccccCCCcc----cc-----cCCHHHHHHHHHhccCCCCEEEEEecCcchhHHHHHHHHHHc
Confidence 678999999875321 13 6789999999999 9998776651 1222333344445543
No 311
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=23.49 E-value=98 Score=30.20 Aligned_cols=55 Identities=13% Similarity=0.225 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHhhhC-CCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEe-cCCCHHHHHHHH
Q psy4448 125 QLKYFRKQLDLSVTH-KLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHS-FDGTPFQAVDSL 185 (487)
Q Consensus 125 Q~~vF~~qL~LA~el-~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~-FsG~~~~a~~~l 185 (487)
-...+++.++..++. +.|+++||.++ ...++.+.+.+. . +++. ++-+++.+++.+
T Consensus 215 ~~p~~k~i~~~i~~~~g~~~i~~~~g~-~~~l~~l~~~g~----d-~~~~d~~~dl~~~~~~~ 271 (338)
T 2eja_A 215 VYPYVNYLISELKDFSDTPVIYFFRGS-SSFIDLAVDYRA----D-ALSVDWSVDIPELFKIY 271 (338)
T ss_dssp THHHHHHHHHHHHHHCCCCEEEEESSH-HHHHHHHTTSCC----S-EEECCTTSCHHHHHHHC
T ss_pred hHHHHHHHHHHHhhcCCCCEEEEcCCc-HHHHHHHHHcCC----C-EEEeCCCCCHHHHHHhC
Confidence 344456666666665 89999999888 778888876643 2 3443 345777777654
No 312
>1vjz_A Endoglucanase; TM1752, structural genomics, JCSG, PSI, prote structure initiative, joint center for structural genomics; 2.05A {Thermotoga maritima} SCOP: c.1.8.3
Probab=23.46 E-value=1.9e+02 Score=27.81 Aligned_cols=45 Identities=22% Similarity=0.253 Sum_probs=35.9
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecCc
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRNA 150 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~a 150 (487)
..-+.|||.|.... .+.+.+.+.++.+++.+.+.+..-++-+-+.
T Consensus 264 g~Pv~igEfG~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 308 (341)
T 1vjz_A 264 GIEVFCGEMGAYNK----TPHDVVLKWLEDLLEIFKTLNIGFALWNFRG 308 (341)
T ss_dssp TCEEEEEEECCCTT----SCHHHHHHHHHHHHHHHHHTTCEEEESCSBS
T ss_pred CCCeEEeccccccC----CChHHHHHHHHHHHHHHHHcCCceEEEecCC
Confidence 45689999998642 3467788999999999999998888887554
No 313
>3hcn_A Ferrochelatase, mitochondrial; metal selectivity, disease mutation, heme biosynthesis, iron, iron-sulfur, lyase, membrane, metal-BIN mitochondrion; HET: CHD HEM GOL; 1.60A {Homo sapiens} SCOP: c.92.1.1 PDB: 2qd3_A* 2qd5_A* 2qd4_A* 3hco_A* 3hcr_A* 2qd1_A* 2hre_A* 3hcp_A* 2qd2_A* 2hrc_A* 1hrk_A* 4f4d_A* 3aqi_A* 2pnj_A* 2po5_A* 2po7_A*
Probab=23.36 E-value=5.6e+02 Score=25.46 Aligned_cols=24 Identities=21% Similarity=0.316 Sum_probs=21.5
Q ss_pred CCCHHHHHHHHHhcCCCEEEEECC
Q psy4448 27 EPDIDHVLNRAWNAGLEKIIVTGT 50 (487)
Q Consensus 27 ~~d~~~vl~ra~~~GV~~ii~v~~ 50 (487)
.+.++++++++++.|+++++++..
T Consensus 103 ~P~i~~~l~~l~~~G~~~ivvlPl 126 (359)
T 3hcn_A 103 HPLTEEAIEEMERDGLERAIAFTQ 126 (359)
T ss_dssp SSBHHHHHHHHHHTTCSEEEEEES
T ss_pred CCCHHHHHHHHHhcCCCeEEEEEC
Confidence 688999999999999999998854
No 314
>4erc_A Dual specificity protein phosphatase 23; alpha beta, phosphatase(hydrolase), hydrolase; 1.15A {Homo sapiens} PDB: 2img_A
Probab=23.31 E-value=88 Score=26.03 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=25.0
Q ss_pred hhhhHHHHHHHHHHhhhCCCCEEEEeccchHHH
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDF 278 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~ 278 (487)
.+.+..-|...++-+.+-+.||++||....+..
T Consensus 70 ~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rs 102 (150)
T 4erc_A 70 APDQIDRFVQIVDEANARGEAVGVHCALGFGRT 102 (150)
T ss_dssp CHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHH
T ss_pred CHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHH
Confidence 345667777777777778899999998877654
No 315
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=23.30 E-value=3e+02 Score=26.66 Aligned_cols=22 Identities=9% Similarity=0.161 Sum_probs=16.7
Q ss_pred hhhhHHHHHHHHHHhhhCCCCE
Q psy4448 246 EPANIVYFRKQLDLSVTHKLPL 267 (487)
Q Consensus 246 ~P~Q~~~F~~ql~lA~~~~lPl 267 (487)
...++..-++-+++|...|..|
T Consensus 116 ~eeNi~~Tk~vv~~ah~~gvsV 137 (288)
T 3q94_A 116 FEENVETTKKVVEYAHARNVSV 137 (288)
T ss_dssp HHHHHHHHHHHHHHHHTTTCEE
T ss_pred HHHHHHHHHHHHHHHHHcCCeE
Confidence 4456777788888888888765
No 316
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=23.26 E-value=4.3e+02 Score=24.08 Aligned_cols=88 Identities=13% Similarity=0.097 Sum_probs=46.7
Q ss_pred hHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHhcCCCEEEEEeeC--CCCCCCCCCChHHHHHHHHH
Q psy4448 54 DSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKEGGKKVVAFGEFG--LDYDRVQYCPVETQLKYFRK 131 (487)
Q Consensus 54 ~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIG--LD~~~~~~~~~e~Q~~vF~~ 131 (487)
++...++.+++.+.= ++-+.+...... .+..++.+.++++++.=.+.++.-.+ ++....+...++...+.+++
T Consensus 18 ~~~~~l~~~~~~G~~--~vEl~~~~~~~~---~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~l~~~d~~~r~~~~~~~~~ 92 (290)
T 2qul_A 18 DFPATAKRIAGLGFD--LMEISLGEFHNL---SDAKKRELKAVADDLGLTVMCCIGLKSEYDFASPDKSVRDAGTEYVKR 92 (290)
T ss_dssp CHHHHHHHHHHTTCS--EEEEESTTGGGS---CHHHHHHHHHHHHHHTCEEEEEEEECGGGCTTCSCHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhCCC--EEEEecCCcccc---chhhHHHHHHHHHHcCCceEEecCCCCCCCCCCCCHHHHHHHHHHHHH
Confidence 466677777765521 222222211111 12446778888877422233332212 22211011113445689999
Q ss_pred HHHHhhhCCCCEEEE
Q psy4448 132 QLDLSVTHKLPLFLH 146 (487)
Q Consensus 132 qL~LA~el~lPViIH 146 (487)
.+++|.++|.+.+++
T Consensus 93 ~i~~a~~lG~~~v~~ 107 (290)
T 2qul_A 93 LLDDCHLLGAPVFAG 107 (290)
T ss_dssp HHHHHHHHTCSEEEE
T ss_pred HHHHHHHcCCCEEEe
Confidence 999999999997763
No 317
>2bb0_A Imidazolonepropionase; TIM barrel, hydrolase; 2.00A {Bacillus subtilis} SCOP: b.92.1.10 c.1.9.17 PDB: 2g3f_A
Probab=23.23 E-value=1.2e+02 Score=29.92 Aligned_cols=57 Identities=11% Similarity=0.029 Sum_probs=42.2
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCchH-HHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAKS-DFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~~-d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
+.+++.+++|.+.++|+.+|+..... ..++.+.+.+. ..+-||.--+.+.++.+.+.
T Consensus 230 e~l~~~~~~a~~~g~~v~~H~~~~~~~~~~~~~~~~g~----~~~~H~~~~~~~~i~~~~~~ 287 (421)
T 2bb0_A 230 SQSRRYLQKAAEAGFGLKIHADEIDPLGGAELAGKLKA----VSADHLVGTSDEGIKKLAEA 287 (421)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECSSSCCSHHHHHHHTTC----SEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEEeccccccCHHHHHHHcCC----cEEhhhhcCCHHHHHHHHHc
Confidence 56888899999999999999854311 23444545432 46889999999999888776
No 318
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=23.20 E-value=4e+02 Score=24.88 Aligned_cols=58 Identities=10% Similarity=0.120 Sum_probs=35.7
Q ss_pred hhHHHHHHHHHhcCCCEEEEEeeCCCC-CCCCCCC---hHHHHHHHHHHHHHhhhCCCCEEEEe
Q psy4448 88 GYLQSLDKIIKEGGKKVVAFGEFGLDY-DRVQYCP---VETQLKYFRKQLDLSVTHKLPLFLHC 147 (487)
Q Consensus 88 ~~l~~L~~ll~~~~~~vvaIGEIGLD~-~~~~~~~---~e~Q~~vF~~qL~LA~el~lPViIH~ 147 (487)
...+.+.+++.+. .+...+=.++.+ ......+ ++...+.|++.+++|.+++.+.+++.
T Consensus 66 ~~~~~l~~~l~~~--gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~~~v~~~ 127 (309)
T 2hk0_A 66 AELATIRKSAKDN--GIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDIHTIGGA 127 (309)
T ss_dssp HHHHHHHHHHHHT--TCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred hhHHHHHHHHHHc--CCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEEee
Confidence 3467788888774 343333233321 1111111 34567899999999999999988754
No 319
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.18 E-value=4.3e+02 Score=24.12 Aligned_cols=30 Identities=3% Similarity=-0.096 Sum_probs=24.1
Q ss_pred HHHHHhhhCCCCEEEEeccchHHHHHHHHH
Q psy4448 255 KQLDLSVTHKLPLFLHCRNAKSDFIEIMKE 284 (487)
Q Consensus 255 ~ql~lA~~~~lPl~iH~r~a~~~~l~il~~ 284 (487)
..++.|++.|++|.+.+++..+++-++++.
T Consensus 187 ~~v~~~~~~G~~v~~WTVn~~~~~~~l~~~ 216 (238)
T 3no3_A 187 DWVKDCKVLGMTSNVWTVDDPKLMEEMIDM 216 (238)
T ss_dssp THHHHHHHTTCEEEEECCCSHHHHHHHHHH
T ss_pred HHHHHHHHCCCEEEEECCCCHHHHHHHHHc
Confidence 467778899999999999888877777654
No 320
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=22.65 E-value=1.1e+02 Score=30.26 Aligned_cols=54 Identities=11% Similarity=0.054 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHhCCCCCCcEEEEe-cCCCHHHHHHH
Q psy4448 125 QLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEYAPKLPRKGVIHS-FDGTPFQAVDS 184 (487)
Q Consensus 125 Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~~~~~~~~~v~H~-FsG~~~~a~~~ 184 (487)
-...+++.++-.++.+.|+++||+++ ..+++.+.+.+. . +++. ++-+.+.+++.
T Consensus 229 ~~p~~~~i~~~i~~~g~~~i~~~~G~-~~~l~~l~~~g~----d-~~~~d~~~d~~~~~~~ 283 (359)
T 2inf_A 229 IKPVMNRIFSELAKENVPLIMFGVGA-SHLAGDWHDLPL----D-VVGLDWRLGIDEARSK 283 (359)
T ss_dssp THHHHHHHHHHHGGGCSCEEEECTTC-GGGHHHHHTSSC----S-EEECCTTSCHHHHHHT
T ss_pred hHHHHHHHHHHHHHcCCcEEEEcCCc-HHHHHHHHHhCC----C-EEEeCCCCCHHHHHHc
Confidence 34556666777766689999999988 667787876543 2 3333 44566666553
No 321
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4; 1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A* 3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Probab=22.57 E-value=2.7e+02 Score=27.54 Aligned_cols=29 Identities=10% Similarity=-0.039 Sum_probs=19.7
Q ss_pred CChhhhHHHHHHHHHHhhhC------CCCEEEEec
Q psy4448 244 RNEPANIVYFRKQLDLSVTH------KLPLFLHCR 272 (487)
Q Consensus 244 ~n~P~Q~~~F~~ql~lA~~~------~lPl~iH~r 272 (487)
-..|+|+.|....-.+-..+ ..||.||++
T Consensus 173 v~~psQ~Ryv~yf~~~l~~~~~~~p~~~~l~L~~i 207 (339)
T 3v0d_A 173 VETASQIRYVGYFEKIKKNYGGQLPPMKKLKVTGV 207 (339)
T ss_dssp C-CHHHHHHHHHHHHHHHHSTTSCCCCCCEEEEEE
T ss_pred cCCHHHHHHHHHHHHHHhhcCccCCCCceEEEEEE
Confidence 35789999888777665542 457777764
No 322
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=22.57 E-value=2.1e+02 Score=27.85 Aligned_cols=40 Identities=15% Similarity=0.108 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHhhhCCCCEEEEecCchHHHHHHHHHh
Q psy4448 121 PVETQLKYFRKQLDLSVTHKLPLFLHCRNAKSDFIEIMKEY 161 (487)
Q Consensus 121 ~~e~Q~~vF~~qL~LA~el~lPViIH~r~a~~d~l~iLk~~ 161 (487)
+.+..+++++..++.+.. +.||+.++-....+++++.+..
T Consensus 63 s~eEr~~v~~~~v~~~~g-rvpViaGvg~~t~~ai~la~~A 102 (316)
T 3e96_A 63 SLEEAKEEVRRTVEYVHG-RALVVAGIGYATSTAIELGNAA 102 (316)
T ss_dssp CHHHHHHHHHHHHHHHTT-SSEEEEEECSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHhCC-CCcEEEEeCcCHHHHHHHHHHH
Confidence 467778888888887764 6788888765666666666543
No 323
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=22.30 E-value=2.4e+02 Score=27.57 Aligned_cols=126 Identities=17% Similarity=0.121 Sum_probs=71.2
Q ss_pred CCHHhHHHHHHHHhcCCCeEEEeecCCCCCCCcCCCchhhHHHHHHHHHh-cCCCEEEEEeeCCCCCCCCCCChHHHHHH
Q psy4448 50 TNVEDSISSLKLAQSDERLYSTVGCHPTRCSEFENDPEGYLQSLDKIIKE-GGKKVVAFGEFGLDYDRVQYCPVETQLKY 128 (487)
Q Consensus 50 ~~~~~~~~~~~la~~~~~v~~avGiHP~~~~~~~~~~~~~l~~L~~ll~~-~~~~vvaIGEIGLD~~~~~~~~~e~Q~~v 128 (487)
.++++....++++.+++....++|+.-.... . ..+. +..+.+.+.+ .-+-.+-.||.|-+ .. +
T Consensus 143 ~~~~~a~~~~~~a~~~~~~vvG~dL~g~E~~-~--~~~~-~~~~~~~A~~~gl~~~~HagE~~~~--------~~----i 206 (326)
T 3pao_A 143 LSEEQAQKTLDQALPFRDAFIAVGLDSSEVG-H--PPSK-FQRVFDRARSEGFLTVAHAGEEGPP--------EY----I 206 (326)
T ss_dssp SCHHHHHHHHHHHGGGGGGCSEEEEESCCTT-C--CGGG-GHHHHHHHHHTTCEECEEESSSSCH--------HH----H
T ss_pred CCHHHHHHHHHHHhhccccceeeCCCCCCCC-C--CHHH-HHHHHHHHHHcCCceeeecCCCCCH--------HH----H
Confidence 3677788888888888776667777543321 1 1222 3333344443 11224567887521 11 1
Q ss_pred HHHHHHHhhhCCCCEEEEecCch--HHHHHHHHHhCCCCCCcEEEEecCCCHHH----------HHHHHcCccchhHhhh
Q psy4448 129 FRKQLDLSVTHKLPLFLHCRNAK--SDFIEIMKEYAPKLPRKGVIHSFDGTPFQ----------AVDSLKTKENLETVKS 196 (487)
Q Consensus 129 F~~qL~LA~el~lPViIH~r~a~--~d~l~iLk~~~~~~~~~~v~H~FsG~~~~----------a~~~l~~~~g~e~v~~ 196 (487)
...|+ .++---+-|+.... .++++.|++.+. .+.||-+.+... ++++++. |.
T Consensus 207 -~~al~---~lg~~rigHgv~l~~d~~l~~~l~~~~i-----~le~cP~SN~~l~~~~~~~~hPi~~ll~~--Gv----- 270 (326)
T 3pao_A 207 -WEALD---LLKVERIDHGVRAFEDERLMRRLIDEQI-----PLTVCPLSNTKLCVFDDMSQHTILDMLER--GV----- 270 (326)
T ss_dssp -HHHHH---TTCCSSEEECGGGGGCHHHHHHHHHHTC-----CEEECHHHHHHTTSSSSGGGCCHHHHHHH--TC-----
T ss_pred -HHHHh---cCCCceeeeeeeecccHHHHHHHHHcCC-----eEEECchhHHHhCCCCCcccChHHHHHHC--CC-----
Confidence 12222 23444589999987 569999988753 577885544321 2223333 32
Q ss_pred cCCCceeeccCCCCC
Q psy4448 197 IPEDRLLLETDCPWC 211 (487)
Q Consensus 197 iP~driLlETD~P~l 211 (487)
++-|-||.|-.
T Consensus 271 ----~V~l~TDdp~~ 281 (326)
T 3pao_A 271 ----KVTVNSDDPAY 281 (326)
T ss_dssp ----CEEECCBSHHH
T ss_pred ----eEEEeCCCccc
Confidence 57899998854
No 324
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=22.07 E-value=84 Score=26.10 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=22.0
Q ss_pred hhhHHHHHHHHHHhhhCCCCEEEEeccchHH
Q psy4448 247 PANIVYFRKQLDLSVTHKLPLFLHCRNAKSD 277 (487)
Q Consensus 247 P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~ 277 (487)
+.+..-|...++-+.+.+.||++||....+.
T Consensus 72 ~~~~~~~~~~i~~~~~~~~~vlVHC~aG~~R 102 (151)
T 2img_A 72 PDQIDRFVQIVDEANARGEAVGVHCALGFGR 102 (151)
T ss_dssp HHHHHHHHHHHHHHHHTTCEEEEECSSSSSH
T ss_pred HHHHHHHHHHHHHHHhCCCcEEEECCCCCCh
Confidence 4455556666666666789999999876655
No 325
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A*
Probab=21.86 E-value=1.8e+02 Score=27.58 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=34.1
Q ss_pred CCEEEEEeeCCCCCCCCCCChHHHHHHHHHHHHHhhhCCCCEEEEecC
Q psy4448 102 KKVVAFGEFGLDYDRVQYCPVETQLKYFRKQLDLSVTHKLPLFLHCRN 149 (487)
Q Consensus 102 ~~vvaIGEIGLD~~~~~~~~~e~Q~~vF~~qL~LA~el~lPViIH~r~ 149 (487)
..-+.|||.|.... .+.+.|.+.++.+++.+.+.+.....-+-+
T Consensus 246 g~Pv~igEfG~~~~----~~~~~~~~~~~~~~~~~~~~~ig~~~W~~~ 289 (317)
T 3aof_A 246 KRPIYIGEFGAYRK----ADLESRIKWTSFVVREMEKRRWSLAYWEFC 289 (317)
T ss_dssp TCCEEEEECCCCTT----SCHHHHHHHHHHHHHHHHHTTCEEEESCSS
T ss_pred CCCEEEeeccccCC----CCHHHHHHHHHHHHHHHHHcCCEEEEEeCC
Confidence 34588999999642 345678888999999999998877777654
No 326
>1v77_A PH1877P, hypothetical protein PH1877; RNAse P protein, TIM-barrel, RNA binding protein; 1.80A {Pyrococcus horikoshii} SCOP: c.6.3.2 PDB: 2czv_A*
Probab=21.79 E-value=64 Score=29.57 Aligned_cols=27 Identities=15% Similarity=0.357 Sum_probs=0.0
Q ss_pred CcEEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEE
Q psy4448 1 MKYIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVT 48 (487)
Q Consensus 1 m~~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v 48 (487)
||++|.|+| . .+.+++|.+. .+.+.+.
T Consensus 7 M~~~D~hvh-----~---------------~e~~~~A~~~-~~~i~it 33 (212)
T 1v77_A 7 VKFIEMDIR-----D---------------KEAYELAKEW-FDEVVVS 33 (212)
T ss_dssp CCCEEEEEC-----S---------------HHHHHHHHHH-CSEEEEE
T ss_pred eEEEEeCcC-----H---------------HHHHHHHHHH-hcEEEEe
No 327
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=21.35 E-value=3e+02 Score=25.88 Aligned_cols=58 Identities=21% Similarity=0.251 Sum_probs=39.8
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTR 78 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~ 78 (487)
.+|+|.+..+ .+..++.+.++|.+.+.+-.....+..++++..++++ +.+.+-++|..
T Consensus 88 ~ldvHLmv~~-----------------p~~~i~~~~~aGAd~itvH~Ea~~~~~~~i~~ir~~G-~k~Gvalnp~T 145 (246)
T 3inp_A 88 GMDVHLMVKP-----------------VDALIESFAKAGATSIVFHPEASEHIDRSLQLIKSFG-IQAGLALNPAT 145 (246)
T ss_dssp CEEEEEECSS-----------------CHHHHHHHHHHTCSEEEECGGGCSCHHHHHHHHHTTT-SEEEEEECTTC
T ss_pred eEEEEEeeCC-----------------HHHHHHHHHHcCCCEEEEccccchhHHHHHHHHHHcC-CeEEEEecCCC
Confidence 5788877554 2456788889999865554443456677777777654 57788899854
No 328
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=20.96 E-value=4.8e+02 Score=23.84 Aligned_cols=39 Identities=8% Similarity=0.081 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHhhhCCCCEEEEec--------cchHHHHHHHHHhCC
Q psy4448 249 NIVYFRKQLDLSVTHKLPLFLHCR--------NAKSDFIEIMKEYAP 287 (487)
Q Consensus 249 Q~~~F~~ql~lA~~~~lPl~iH~r--------~a~~~~l~il~~~~~ 287 (487)
-.+.++.-.++|++.|+.|.||.. ...+++++++++...
T Consensus 144 ~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~~~~ll~~v~~ 190 (287)
T 3kws_A 144 LCEQFNEMGTFAAQHGTSVIFEPLNRKECFYLRQVADAASLCRDINN 190 (287)
T ss_dssp HHHHHHHHHHHHHHTTCCEEECCCCTTTCSSCCCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCcccCcccCCHHHHHHHHHHcCC
Confidence 456777888999999999999954 356788999998753
No 329
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=20.85 E-value=4.5e+02 Score=24.31 Aligned_cols=57 Identities=12% Similarity=0.051 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhhC--CCCEEEEecCc--------------hHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHc
Q psy4448 126 LKYFRKQLDLSVTH--KLPLFLHCRNA--------------KSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLK 186 (487)
Q Consensus 126 ~~vF~~qL~LA~el--~lPViIH~r~a--------------~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~ 186 (487)
.--|+..|+++..+ +..+.|=.... .+.+++++++++.. .++++-+|+ .+.++.+-+
T Consensus 114 iptL~evl~~~~~~~~~~~l~iEiK~~~~~~~~~~~~~~~~~~~v~~~l~~~~~~--~~v~i~Sf~--~~~l~~~~~ 186 (272)
T 3ch0_A 114 KPLFRELIETAEKLSAKIQYNGEIKSTVEGDNIDHPNIALFCDLVVAEIKKAHIT--DRFTLQSFD--VRALEYMHS 186 (272)
T ss_dssp CCBHHHHHHHHHHHCSSCEEEEEECCCGGGBTTTBCCHHHHHHHHHHHHHHTTCG--GGEEEEESC--HHHHHHHHH
T ss_pred CcCHHHHHHHHHHhCCCceEEEEECCCcCcccccCccHHHHHHHHHHHHHHcCCC--CcEEEEeCC--HHHHHHHHH
Confidence 44577778888765 56777665432 35688888887543 368888885 445554433
No 330
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=20.69 E-value=5e+02 Score=23.86 Aligned_cols=56 Identities=11% Similarity=-0.005 Sum_probs=38.1
Q ss_pred HHHHHHHHhhhCCCCEEEEecC---------chHHHHHHHHHhCCCCCCcEEEEecCCCHHHHHHHHcC
Q psy4448 128 YFRKQLDLSVTHKLPLFLHCRN---------AKSDFIEIMKEYAPKLPRKGVIHSFDGTPFQAVDSLKT 187 (487)
Q Consensus 128 vF~~qL~LA~el~lPViIH~r~---------a~~d~l~iLk~~~~~~~~~~v~H~FsG~~~~a~~~l~~ 187 (487)
-|+..|+++.+.+..+.|-... ..+.+++++++++.. .+.++.||+ .+.++.+-++
T Consensus 87 tL~evl~~~~~~~~~l~iEiK~~~~~~~~~~~~~~v~~~l~~~~~~--~~v~~~SF~--~~~l~~~~~~ 151 (250)
T 3ks6_A 87 TLEELCALYVDSHVNFRCEIKPGVDGLPYEGFVALVIAGLERHSML--ERTTFSSFL--LASMDELWKA 151 (250)
T ss_dssp EHHHHHHHHTTCSCEEEEEECCCTTSCCCTTHHHHHHHHHHHTTCG--GGEEEEESC--HHHHHHHHHH
T ss_pred CHHHHHHHHhccCcEEEEEeCCCcccCcchHHHHHHHHHHHhcCCC--CCEEEEeCC--HHHHHHHHHH
Confidence 4666777777677888877654 356788899888643 378999995 4455554433
No 331
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=20.22 E-value=3.3e+02 Score=26.64 Aligned_cols=94 Identities=11% Similarity=0.132 Sum_probs=56.4
Q ss_pred HHHHHHHHHhhhCCCCEEEEecCch------HHHHHHHHHhCCCCCCcEEEEecCC-CHHHHHHHHcCccchhHhhhcCC
Q psy4448 127 KYFRKQLDLSVTHKLPLFLHCRNAK------SDFIEIMKEYAPKLPRKGVIHSFDG-TPFQAVDSLKTKENLETVKSIPE 199 (487)
Q Consensus 127 ~vF~~qL~LA~el~lPViIH~r~a~------~d~l~iLk~~~~~~~~~~v~H~FsG-~~~~a~~~l~~~~g~e~v~~iP~ 199 (487)
+..+..++.|.+.+-||||-.-... +.+..+++.... ...++++|-=-| +.+.++++++. |+.
T Consensus 28 e~~~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~-~~VPValHlDHg~~~e~~~~ai~~--GFt------- 97 (305)
T 1rvg_A 28 EFLQAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE-ARVPVAVHLDHGSSYESVLRALRA--GFT------- 97 (305)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH-CSSCEEEEEEEECSHHHHHHHHHT--TCS-------
T ss_pred HHHHHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh-CCCcEEEECCCCCCHHHHHHHHHc--CCC-------
Confidence 5678888899999999998764321 112222222111 113567754333 67888888887 440
Q ss_pred CceeeccCCCCCCCCCCCcccchhcccchhhhhhccCCccccCCC-ChhhhHHHHHHHHHHhhhCCCCE
Q psy4448 200 DRLLLETDCPWCEVKPSHAGFAYIRTQHEKVKKEQWKPDKMVKSR-NEPANIVYFRKQLDLSVTHKLPL 267 (487)
Q Consensus 200 driLlETD~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-n~P~Q~~~F~~ql~lA~~~~lPl 267 (487)
- .++|++. +...++..-++-+++|...|..|
T Consensus 98 -S------------------------------------VMiDgS~~p~eENi~~Tk~vv~~ah~~gvsV 129 (305)
T 1rvg_A 98 -S------------------------------------VMIDKSHEDFETNVRETRRVVEAAHAVGVTV 129 (305)
T ss_dssp -E------------------------------------EEECCTTSCHHHHHHHHHHHHHHHHHTTCEE
T ss_pred -e------------------------------------eeeCCCCCCHHHHHHHHHHHHHHHHHcCCEE
Confidence 0 1122222 34567788888889999888775
No 332
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=20.20 E-value=80 Score=29.42 Aligned_cols=58 Identities=10% Similarity=0.138 Sum_probs=39.0
Q ss_pred EEEecccCCCcccccccccCCCCCCCCHHHHHHHHHhcCCCEEEEECCCHHhHHHHHHHHhcCCCeEEEeecCCCC
Q psy4448 3 YIDIGANLKDAMYEGFYSSKNQKHEPDIDHVLNRAWNAGLEKIIVTGTNVEDSISSLKLAQSDERLYSTVGCHPTR 78 (487)
Q Consensus 3 ~iD~H~HL~~~~f~~~~~g~~~~~~~d~~~vl~ra~~~GV~~ii~v~~~~~~~~~~~~la~~~~~v~~avGiHP~~ 78 (487)
.+|+|.+..++ +..++.+.++|.+.+.+-.....+..+.++..+++ ++.+.+-++|..
T Consensus 66 ~~dvhLmv~~p-----------------~~~i~~~~~aGad~itvH~Ea~~~~~~~i~~i~~~-G~k~gval~p~t 123 (228)
T 3ovp_A 66 FFDMHMMVSKP-----------------EQWVKPMAVAGANQYTFHLEATENPGALIKDIREN-GMKVGLAIKPGT 123 (228)
T ss_dssp CEEEEEECSCG-----------------GGGHHHHHHHTCSEEEEEGGGCSCHHHHHHHHHHT-TCEEEEEECTTS
T ss_pred cEEEEEEeCCH-----------------HHHHHHHHHcCCCEEEEccCCchhHHHHHHHHHHc-CCCEEEEEcCCC
Confidence 57888887653 23467778899986666544444566677777765 456788889854
No 333
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=20.09 E-value=1e+02 Score=25.78 Aligned_cols=35 Identities=14% Similarity=0.056 Sum_probs=24.8
Q ss_pred ChhhhHHHHHHHHHHhhhCCCCEEEEeccchHHHH
Q psy4448 245 NEPANIVYFRKQLDLSVTHKLPLFLHCRNAKSDFI 279 (487)
Q Consensus 245 n~P~Q~~~F~~ql~lA~~~~lPl~iH~r~a~~~~l 279 (487)
+...+..-+...++-+.+.+.||.+||....+..-
T Consensus 70 ~~~~~~~~~~~~i~~~~~~~~~vlVHC~~G~~Rsg 104 (157)
T 3rgo_A 70 PTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSA 104 (157)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEESSSSSSHHH
T ss_pred ChHHHHHHHHHHHHHHHHCCCEEEEECCCCCChHH
Confidence 34445556666777777788999999987765543
No 334
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=20.00 E-value=5.1e+02 Score=23.77 Aligned_cols=92 Identities=14% Similarity=0.120 Sum_probs=49.0
Q ss_pred HhHHHHHHHHhcCCCeEEEeec-CC--CCC-CCcCCCchhhHHHHHHHHHhcCCCEEEEEeeC---CCCCCCCCCChHHH
Q psy4448 53 EDSISSLKLAQSDERLYSTVGC-HP--TRC-SEFENDPEGYLQSLDKIIKEGGKKVVAFGEFG---LDYDRVQYCPVETQ 125 (487)
Q Consensus 53 ~~~~~~~~la~~~~~v~~avGi-HP--~~~-~~~~~~~~~~l~~L~~ll~~~~~~vvaIGEIG---LD~~~~~~~~~e~Q 125 (487)
.++...++.+++.+.-..-+.. .+ +.. ..+ ..+.++.+.+++.++.=.+.+++--+ ++....+...++..
T Consensus 30 ~~~~~~l~~~~~~G~~~iEl~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~l~~~d~~~r~~~ 106 (295)
T 3cqj_A 30 ECWLERLQLAKTLGFDFVEMSVDETDERLSRLDW---SREQRLALVNAIVETGVRVPSMCLSAHRRFPLGSEDDAVRAQG 106 (295)
T ss_dssp SCHHHHHHHHHHTTCSEEEEECCSSHHHHGGGGC---CHHHHHHHHHHHHHHCCEEEEEEEGGGGTSCTTCSSHHHHHHH
T ss_pred CCHHHHHHHHHhcCCCEEEEecCCcccccCcccC---CHHHHHHHHHHHHHcCCeEEEEecCcccCCCCCCCCHHHHHHH
Confidence 4677778877776531111111 11 000 011 13456788888877422344443111 22211111124557
Q ss_pred HHHHHHHHHHhhhCCCCEE-EEe
Q psy4448 126 LKYFRKQLDLSVTHKLPLF-LHC 147 (487)
Q Consensus 126 ~~vF~~qL~LA~el~lPVi-IH~ 147 (487)
.+.+++.+++|.+++.+.+ +|.
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~ 129 (295)
T 3cqj_A 107 LEIMRKAIQFAQDVGIRVIQLAG 129 (295)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECC
T ss_pred HHHHHHHHHHHHHcCCCEEEECC
Confidence 8999999999999999865 564
Done!