RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4449
(2417 letters)
>1wb0_A Chitinase 1, chitotriosidase 1; cyclopentapeptide inhibitors,
chitinase inhibitors, carbohyd metabolism, chitin
degradation, chitin-binding; HET: VR0 MEA; 1.65A {Homo
sapiens} SCOP: c.1.8.5 d.26.3.1 PDB: 1waw_A* 1guv_A
1lg2_A 1lg1_A 1lq0_A 1hki_A* 1hkj_A* 1hkm_A* 1hkk_A*
Length = 445
Score = 513 bits (1324), Expect = e-164
Identities = 161/465 (34%), Positives = 235/465 (50%), Gaps = 42/465 (9%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFY 1771
K+VCYFTNWA YRQ ++LP D+D LCTH+IY FA + QL + D Y
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWN-----DETLY 56
Query: 1772 EKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLD 1829
++ LKK +K LAIGGWN K++ +V + R F+ + F+ +++FDGLD
Sbjct: 57 QEFNGLKKMNPKLKTLLAIGGWNFG-TQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLD 115
Query: 1830 LDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPH-------DLLLSAAVSPSKAVI 1882
LDWEYP + PA DK+ F L+++L AF LLLSAAV + +
Sbjct: 116 LDWEYP-----GSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAGQTYV 170
Query: 1883 DNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDT--TPTFNANYSLHYWV 1940
D Y++ +++NLD++++M YD+HG W+K TGH +P+Y ++ + N + ++ W+
Sbjct: 171 DAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAVQQWL 230
Query: 1941 SHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQ 2000
G K+I GMP YG+SFTLA + + + G G T+ G LAYYE+C
Sbjct: 231 QKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVCS--- 287
Query: 2001 KDGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKN 2060
G R + ++ PY F+ +QWVGFDD K ++K LGGAM+WALDLDDF
Sbjct: 288 WKGATKQRIQDQK-VPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAG 346
Query: 2061 -FCGCESYPLLKTINRVLRNYPGPGPNCFLKPVPPKHEDNVPQTTGTQYEEDETLSDDTI 2119
C YPL++T+ + L P L+ P +
Sbjct: 347 FSCNQGRYPLIQTLRQELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTF-------- 398
Query: 2120 VIDSKSNRCNRTGELYQHEGDCAKFASCENGLIKIYDCPPGLHFN 2164
+ G LY + + + F SC G + CP GL F+
Sbjct: 399 ------CQGKADG-LYPNPRERSSFYSCAAGRLFQQSCPTGLVFS 436
Score = 307 bits (788), Expect = 1e-92
Identities = 105/319 (32%), Positives = 173/319 (54%), Gaps = 30/319 (9%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
K+VCY TNW+ R+ + +F+P+++D LCTH++YAFA + + LS N D+ Y
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWN-----DETLY 56
Query: 444 QRISSSPL-VTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
Q + L + K+K L+AIGGW + +K++ ++++ +NR+ F+ S + FLR++ F G
Sbjct: 57 QEFNG--LKKMNPKLKTLLAIGGWNFGT-QKFTDMVATANNRQTFVNSAIRFLRKYSFDG 113
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY---------SIAVGISGY 553
L DW YP DK F L+Q+L F + S AV
Sbjct: 114 LDLDWEYP-----GSQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAG-- 166
Query: 554 KEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEP--YPNYNINTAL 611
+ ++ Y+ + +++F++LM+YD+HG+WE +TG SPL R E + N++ A+
Sbjct: 167 QTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGAAASLNVDAAV 226
Query: 612 KLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEIC 671
+ + G K+++G+P YG+S+TL + +GA G G G +T++ GMLAYYE+C
Sbjct: 227 QQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVC 286
Query: 672 YRIKTRKWTVQRNTKSLEP 690
+ T QR P
Sbjct: 287 ---SWKGATKQRIQDQKVP 302
Score = 271 bits (696), Expect = 4e-80
Identities = 105/393 (26%), Positives = 190/393 (48%), Gaps = 44/393 (11%)
Query: 14 QVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGGY 73
++VCY + YR A F K++ P CTH+IYA+A + + + D + Y
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWN---D--ETLY 56
Query: 74 KSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDL 127
+ F GLK+ NP+LK LA+ F + + +R F++S + Y FDGLDL
Sbjct: 57 QEFNGLKKMNPKLKTLLAIGGWNFGTQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLDL 116
Query: 128 NVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLR-------RNNYQLTLTSPGV 177
D P S A ++ F+T +Q+L++ + + L+ P
Sbjct: 117 ---DWEYPG-------SQGSPAVDKERFTTLVQDLANAFQQEAQTSGKERLLLSAAVPAG 166
Query: 178 IDRKTSLVDISVVAPLVDLILLKSFNN----DHMDDEVVPVKPNTKVNIQVTSTIANFNN 233
+ ++ +A +D + L +++ + + P+ + + A N
Sbjct: 167 QTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEES-----GAAASLN 221
Query: 234 IESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLA 293
+++AV W++KG ++I+G+P +G+S+ L + S+ +GA G GT G +T+ G LA
Sbjct: 222 VDAAVQQWLQKGTPASKLILGMPTYGRSFTLASSSDTRVGAPATGSGTPGPFTKEGGMLA 281
Query: 294 FFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTL 353
++EVC+ + P++ + ++W+ +++ +S + K++Y+K + LGGAM+W L
Sbjct: 282 YYEVCSWKGAT--KQRIQDQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWAL 339
Query: 354 DLDDFRG-FCGQ-KYPLLSAVVSNLQPEEPEPK 384
DLDDF G C Q +YPL+ + L
Sbjct: 340 DLDDFAGFSCNQGRYPLIQTLRQELSLPYLPSG 372
Score = 266 bits (682), Expect = 3e-78
Identities = 89/267 (33%), Positives = 136/267 (50%), Gaps = 46/267 (17%)
Query: 1341 KIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKISE 1395
K+VCYFTNWA YR G+ +++ K + + F ++
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIY-------------------AFAGMTN 42
Query: 1396 LTYVHI-----LFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEH 1448
Y+ LKK +K LAIGGWN K++ +V +A RQ F+
Sbjct: 43 HQLSTTEWNDETLYQEFNGLKKMNPKLKTLLAIGGWNFG-TQKFTDMVATANNRQTFVNS 101
Query: 1449 VVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG------- 1501
++FL KY FDGLDLDWEYP P DKE F V++L AF+
Sbjct: 102 AIRFLRKYSFDGLDLDWEYPGS-----QGSPAVDKERFTTLVQDLANAFQQEAQTSGKER 156
Query: 1502 LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDD--D 1559
LLLSAAV + ++A Y+V ++++LD++++M YD+HG W+K TGH +PLY+ ++
Sbjct: 157 LLLSAAVPAGQTYVDAGYEVDKIAQNLDFVNLMAYDFHGSWEKVTGHNSPLYKRQEESGA 216
Query: 1560 FFYFNANFTMNYWMKKGAPSRKLVMGV 1586
N + + W++KG P+ KL++G+
Sbjct: 217 AASLNVDAAVQQWLQKGTPASKLILGM 243
Score = 154 bits (392), Expect = 4e-40
Identities = 47/155 (30%), Positives = 68/155 (43%), Gaps = 10/155 (6%)
Query: 695 TLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQG 754
TL + +GA G G G +T++ GMLAYYE+C + T QR P+ F+
Sbjct: 251 TLASSSDTRVGAPATGSGTPGPFTKEGGMLAYYEVC---SWKGATKQRIQDQKVPYIFRD 307
Query: 755 DQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCC-MESFPLLRAVNRAFGRL 813
+QWV ++D S KV ++K G G M W +DLDDF C +PL++ + +
Sbjct: 308 NQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSCNQGRYPLIQTLRQELSL- 366
Query: 814 KDKKPSAPDCTRPTVSTPSPIGTSTTEDSVSSNWS 848
P + P P S E S
Sbjct: 367 -----PYLPSGTPELEVPKPGQPSEPEHGPSPGQD 396
Score = 144 bits (365), Expect = 2e-36
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 8/128 (6%)
Query: 2191 KVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFY 2250
K++CY+T+WA RQ E ++ P+D+D SLCTHL+YAFA + +L N ++ Y
Sbjct: 2 KLVCYFTNWAQYRQGEARFLPKDLDPSLCTHLIYAFAGMTNHQLSTTEWN-----DETLY 56
Query: 2251 EKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLE 2308
++ K ++ +LAIGGW+ + K++ +V R+ FV FL Y F+GL+
Sbjct: 57 QEFNGLKKMNPKLKTLLAIGGWNFG-TQKFTDMVATANNRQTFVNSAIRFLRKYSFDGLD 115
Query: 2309 FAWEYPKC 2316
WEYP
Sbjct: 116 LDWEYPGS 123
Score = 102 bits (255), Expect = 2e-22
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 2328 WTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNL-C 2386
T R + PY + W+ +DD + K +KQ GLGGAMVW++DLDDF C
Sbjct: 291 ATKQRIQ-DQKVPYIFRDNQWVGFDDVESFKTKVSYLKQKGLGGAMVWALDLDDFAGFSC 349
Query: 2387 SCGPYPLLSAVNYELRNTT 2405
+ G YPL+ + EL
Sbjct: 350 NQGRYPLIQTLRQELSLPY 368
Score = 82.5 bits (204), Expect = 4e-16
Identities = 31/156 (19%), Positives = 47/156 (30%), Gaps = 34/156 (21%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCCMDKSRFRKIEGEKAKCTGLYQINSVNSFPNWNI 930
V ++K G G M W +DLDDF C L I ++
Sbjct: 323 VSYLKQKGLGGAMVWALDLDDFAGFSCNQGRY------------PL--IQTLR------- 361
Query: 931 DNRRFSKSRFRKIEGQKAKCTGLYQTNSVNSFPNWNIDNRRFSIDSDTDSDSCTSGEYYP 990
+++ P+ D+ + YP
Sbjct: 362 ----------QELSLPYLPSGTPELEVPKPGQPSEPEHGPSPGQDTFCQ---GKADGLYP 408
Query: 991 VDGECGSYYRCILGTLKKESCAPGLHWNKVNKICDW 1026
E S+Y C G L ++SC GL ++ K C W
Sbjct: 409 NPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 444
Score = 66.3 bits (162), Expect = 6e-11
Identities = 15/75 (20%), Positives = 26/75 (34%)
Query: 1108 TQRPTRPATSSWWTPITTTESTQEEYIPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCG 1167
+ P + + P+P + SF C+ G L +QSC
Sbjct: 371 SGTPELEVPKPGQPSEPEHGPSPGQDTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCP 430
Query: 1168 PSLLWNAKKKLCDWS 1182
L+++ K C W+
Sbjct: 431 TGLVFSNSCKCCTWN 445
Score = 53.2 bits (128), Expect = 7e-07
Identities = 10/49 (20%), Positives = 17/49 (34%)
Query: 1200 PKDESCQEGEFAAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDW 1248
+ P + + + C G SC GL +++ K C W
Sbjct: 396 DTFCQGKADGLYPNPRERSSFYSCAAGRLFQQSCPTGLVFSNSCKCCTW 444
>1vf8_A YM1, secretory protein; chitinase, CHI-lectin, structural plasticity,
functional versatility, immune system; 1.31A {Mus
musculus} SCOP: c.1.8.5 d.26.3.1 PDB: 1e9l_A
Length = 377
Score = 486 bits (1254), Expect = e-156
Identities = 142/385 (36%), Positives = 213/385 (55%), Gaps = 25/385 (6%)
Query: 1711 FKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
++++CY+T+WA R G + P +ID LCTH+IY FA + +++ + D +
Sbjct: 1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTH-----EQDLRD 55
Query: 1771 YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGL 1828
YE + LK K +K LAIGGW +S +V++ Q R FI V+ F+ ++NFDGL
Sbjct: 56 YEALNGLKDKNTELKTLLAIGGWKFGP-APFSAMVSTPQNRQIFIQSVIRFLRQYNFDGL 114
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPH-------DLLLSAAVSPSKAV 1881
+LDW+YP + P DK F+ L+KE+R AF LLL++ + V
Sbjct: 115 NLDWQYPGS-----RGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIIDV 169
Query: 1882 IDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTT--PTFNANYSLHYW 1939
I + Y IP +S++LD+I VMTYD H D TG +P+Y P D N + + YW
Sbjct: 170 IKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKSADLNVDSIISYW 229
Query: 1940 VSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKI 1999
HGA +K+I G P YG +F L+D +K G+ + T G+ T G LAYYE+C +
Sbjct: 230 KDHGAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFL 289
Query: 2000 QKDGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFK 2059
+G V D + PYA++G++WVG+D+ KA+++K N+LGGA++W LD+DDF
Sbjct: 290 -NEGATEVWDAPQE-VPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFS 347
Query: 2060 N-FCGCESYPLLKTINRVLRNYPGP 2083
FC +PL T+ L +
Sbjct: 348 GSFCHQRHFPLTSTLKGDLNIHSAS 372
Score = 310 bits (796), Expect = 2e-94
Identities = 94/317 (29%), Positives = 164/317 (51%), Gaps = 24/317 (7%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
+++CY T+W+ R +G F P NID LCTH++YAFA + N ++ + D Y
Sbjct: 2 QLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITY-----THEQDLRDY 56
Query: 444 QRISSSPLVT-HGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
+ ++ L + ++K L+AIGGW +S ++S+ NR+ FI+SV+ FLR+++F G
Sbjct: 57 EALNG--LKDKNTELKTLLAIGGWKFGP-APFSAMVSTPQNRQIFIQSVIRFLRQYNFDG 113
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGI-------SGYKE 555
L+ DW YP DK F L++E++ F++ + +G +
Sbjct: 114 LNLDWQYPGS-----RGSPPKDKHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAGIID 168
Query: 556 ILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEP--YPNYNINTALKL 613
+++ Y P L+ ++++ +M+YD H +G TG SPL P + + N+++ +
Sbjct: 169 VIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIGKSADLNVDSIISY 228
Query: 614 IDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYR 673
+ G K+++G P YG ++ L + G+GA T G G+YT + G+LAYYE+C
Sbjct: 229 WKDHGAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTF 288
Query: 674 IKTRKWTVQRNTKSLEP 690
+ T + P
Sbjct: 289 LN-EGATEVWDAPQEVP 304
Score = 281 bits (722), Expect = 1e-84
Identities = 111/394 (28%), Positives = 177/394 (44%), Gaps = 42/394 (10%)
Query: 13 HQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGG 72
+Q++CY + + R +F N+ P CTH+IYA+A + E
Sbjct: 1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTHEQDL-----RD 55
Query: 73 YKSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLD 126
Y++ GLK+ N ELK LA+ + F ++ S ++R FI SV+ Y FDGL+
Sbjct: 56 YEALNGLKDKNTELKTLLAIGGWKFGPAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGLN 115
Query: 127 LNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLR-------RNNYQLTLTSPG 176
L D P D + FS ++E+ LT T G
Sbjct: 116 L---DWQYPGSRGSPPKD-------KHLFSVLVKEMRKAFEEESVEKDIPRLLLTSTGAG 165
Query: 177 VIDRKTSLVDISVVAPLVDLILLKSF----NNDHMDDEVVPVKPNTKVNIQVTSTIANFN 232
+ID S I ++ +D I + ++ D E P+ + +
Sbjct: 166 IIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPY-----DIGKSADL 220
Query: 233 NIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYL 292
N++S + W GA E++I+G P +G ++ L + S+ G+GA G GKYT G L
Sbjct: 221 NVDSIISYWKDHGAASEKLIVGFPAYGHTFILSDPSKTGIGAPTISTGPPGKYTDESGLL 280
Query: 293 AFFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWT 352
A++EVC + + P+ + +EW+ Y+N S + K ++KD +LGGA++W
Sbjct: 281 AYYEVCTFLNEGATEVWDAPQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWP 340
Query: 353 LDLDDFRG-FCGQ-KYPLLSAVVSNLQPEEPEPK 384
LD+DDF G FC Q +PL S + +L K
Sbjct: 341 LDMDDFSGSFCHQRHFPLTSTLKGDLNIHSASCK 374
Score = 265 bits (679), Expect = 7e-79
Identities = 83/268 (30%), Positives = 126/268 (47%), Gaps = 46/268 (17%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKIS 1394
++++CY+T+WA RP +G + + + F +
Sbjct: 1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIY-------------------AFAGMQ 41
Query: 1395 ELTYVHIL-----FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIE 1447
+ YE + LK K +K LAIGGW +S +V++ RQ FI+
Sbjct: 42 NNEITYTHEQDLRDYEALNGLKDKNTELKTLLAIGGWKFG-PAPFSAMVSTPQNRQIFIQ 100
Query: 1448 HVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG------ 1501
V++FL +Y FDGL+LDW+YP P DK F + V+E+ +AF+
Sbjct: 101 SVIRFLRQYNFDGLNLDWQYPGS-----RGSPPKDKHLFSVLVKEMRKAFEEESVEKDIP 155
Query: 1502 -LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDD-- 1558
LLL++ + VI + Y + LS+SLD+I VMTYD H D TG +PLY+ P D
Sbjct: 156 RLLLTSTGAGIIDVIKSGYKIPELSQSLDYIQVMTYDLHDPKDGYTGENSPLYKSPYDIG 215
Query: 1559 DFFYFNANFTMNYWMKKGAPSRKLVMGV 1586
N + ++YW GA S KL++G
Sbjct: 216 KSADLNVDSIISYWKDHGAASEKLIVGF 243
Score = 152 bits (386), Expect = 8e-40
Identities = 37/118 (31%), Positives = 58/118 (49%), Gaps = 2/118 (1%)
Query: 695 TLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQG 754
L + G+GA T G G+YT + G+LAYYE+C + T + P+ +QG
Sbjct: 251 ILSDPSKTGIGAPTISTGPPGKYTDESGLLAYYEVCTFLN-EGATEVWDAPQEVPYAYQG 309
Query: 755 DQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCC-MESFPLLRAVNRAFG 811
++WV Y++ S K +++K N G + W +D+DDF C FPL +
Sbjct: 310 NEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDMDDFSGSFCHQRHFPLTSTLKGDLN 367
Score = 149 bits (379), Expect = 6e-39
Identities = 47/129 (36%), Positives = 69/129 (53%), Gaps = 8/129 (6%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGF 2249
Y+++CYYTSWA R EG + P +ID LCTHL+YAFA + E+ + +
Sbjct: 1 YQLMCYYTSWAKDRPIEGSFKPGNIDPCLCTHLIYAFAGMQNNEITYTH-----EQDLRD 55
Query: 2250 YEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGL 2307
YE + K ++ +LAIGGW +S +V+ R+ F++ V FL Y F+GL
Sbjct: 56 YEALNGLKDKNTELKTLLAIGGWKFG-PAPFSAMVSTPQNRQIFIQSVIRFLRQYNFDGL 114
Query: 2308 EFAWEYPKC 2316
W+YP
Sbjct: 115 NLDWQYPGS 123
Score = 106 bits (267), Expect = 2e-24
Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDL 2379
C+ + T V D+ PYAY G W+ YD+ R + K + +K + LGGA+VW +D+
Sbjct: 286 CTFLNEG-ATEVWDA-PQEVPYAYQGNEWVGYDNVRSFKLKAQWLKDNNLGGAVVWPLDM 343
Query: 2380 DDFQN-LCSCGPYPLLSAVNYELRNTTLNYEP 2410
DDF C +PL S + +L + + +
Sbjct: 344 DDFSGSFCHQRHFPLTSTLKGDLNIHSASCKG 375
Score = 51.6 bits (124), Expect = 2e-06
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCC 897
+++K N G + W +D+DDF C
Sbjct: 325 AQWLKDNNLGGAVVWPLDMDDFSGSFC 351
>3fy1_A Amcase, TSA1902, acidic mammalian chitinase; structure,
crystallography, asthma,inhibitor, chitin degradation,
methylallosamidin; HET: NA1 NAA AMI; 1.70A {Homo sapiens}
PDB: 3fxy_A* 3rm4_A* 3rm8_A* 3rm9_A* 3rme_A* 2ybt_A*
2ybu_A*
Length = 395
Score = 478 bits (1232), Expect = e-152
Identities = 147/411 (35%), Positives = 225/411 (54%), Gaps = 31/411 (7%)
Query: 1711 FKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
+++ CYFTNWA YR G+++P DI+ LCTH+IY FA + +++ W D+
Sbjct: 1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITT---IEWNDVTL-- 55
Query: 1771 YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGL 1828
Y+ LK K +K LAIGGWN ++ +V++ + R FI V+ F+ ++ FDGL
Sbjct: 56 YQAFNGLKNKNSQLKTLLAIGGWNFG-TAPFTAMVSTPENRQTFITSVIKFLRQYEFDGL 114
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPH-------DLLLSAAVSPSKAV 1881
D DWEYP + P DK F L++E+R AF L+++AAV+ +
Sbjct: 115 DFDWEYPGS-----RGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGISN 169
Query: 1882 IDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDT--TPTFNANYSLHYW 1939
I + Y+IP +S+ LD+I VMTYD HG W+ TG +P+Y P DT N +Y ++YW
Sbjct: 170 IQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVMNYW 229
Query: 1940 VSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKI 1999
+GA +K+I G P YG +F L++ + G+ + T G AG + G AYYEIC +
Sbjct: 230 KDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFL 289
Query: 2000 QKDGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFK 2059
K+G D + PYA++G+ WVG+D+ KA+++K+N GGAM+WA+DLDDF
Sbjct: 290 -KNGATQGWDAPQE-VPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDDFT 347
Query: 2060 N-FCGCESYPLLKTINRVLRNYPGPGPNCFLKPVPPKHEDNVPQTTGTQYE 2109
FC +PL+ T+ + L P + + + G+ +
Sbjct: 348 GTFCNQGKFPLISTLKKALGLQSASC------TAPAQPIEPITAAPGSHHH 392
Score = 307 bits (789), Expect = 2e-93
Identities = 102/319 (31%), Positives = 165/319 (51%), Gaps = 28/319 (8%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
++ CY TNW+ R G+F+P++I+ LCTH++YAFA + N ++ N D Y
Sbjct: 2 QLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITTIEWN-----DVTLY 56
Query: 444 QRISSSPL-VTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
Q + L + ++K L+AIGGW + ++ ++S+ NR+ FI SV+ FLR+++F G
Sbjct: 57 QAFNG--LKNKNSQLKTLLAIGGWNFGT-APFTAMVSTPENRQTFITSVIKFLRQYEFDG 113
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY---------SIAVGISGY 553
L FDW YP DK F L+QE++ F++ + AV
Sbjct: 114 LDFDWEYP-----GSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAG-- 166
Query: 554 KEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEP--YPNYNINTAL 611
++ Y+ P L+ +++++ +M+YD HG+WEG TG SPL P + N++ +
Sbjct: 167 ISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTGSNAYLNVDYVM 226
Query: 612 KLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEIC 671
+ G K+++G P YG ++ L G+GA T G G AG Y ++ G+ AYYEIC
Sbjct: 227 NYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEIC 286
Query: 672 YRIKTRKWTVQRNTKSLEP 690
+K T + P
Sbjct: 287 TFLKN-GATQGWDAPQEVP 304
Score = 279 bits (715), Expect = 2e-83
Identities = 104/390 (26%), Positives = 175/390 (44%), Gaps = 36/390 (9%)
Query: 13 HQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGG 72
+Q+ CY + YR F ++ P CTH+IYA+A + I + DV
Sbjct: 1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITTIEWN---DV--TL 55
Query: 73 YKSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLD 126
Y++F GLK N +LK LA+ + F ++ S E+R FI+SV++ Y+FDGLD
Sbjct: 56 YQAFNGLKNKNSQLKTLLAIGGWNFGTAPFTAMVSTPENRQTFITSVIKFLRQYEFDGLD 115
Query: 127 LNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLR-------RNNYQLTLTSPGVID 179
+ + P D + F+ +QE+ + +T I
Sbjct: 116 FDWEYPGSRGSPPQD-------KHLFTVLVQEMREAFEQEAKQINKPRLMVTAAVAAGIS 168
Query: 180 RKTSLVDISVVAPLVDLILLKSFNN----DHMDDEVVPVKPNTKVNIQVTSTIANFNNIE 235
S +I ++ +D I + +++ + E P+ + + N++
Sbjct: 169 NIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPT-----DTGSNAYLNVD 223
Query: 236 SAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFF 295
+ W GA E++I+G P +G ++ L N S G+GA G G G Y + G A++
Sbjct: 224 YVMNYWKDNGAPAEKLIVGFPTYGHNFILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYY 283
Query: 296 EVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDL 355
E+C K+ + + P+ + + W+ Y+N S K ++K GGAM+W +DL
Sbjct: 284 EICTFLKNGATQGWDAPQEVPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDL 343
Query: 356 DDFRG-FCGQ-KYPLLSAVVSNLQPEEPEP 383
DDF G FC Q K+PL+S + L +
Sbjct: 344 DDFTGTFCNQGKFPLISTLKKALGLQSASC 373
Score = 258 bits (662), Expect = 3e-76
Identities = 91/268 (33%), Positives = 134/268 (50%), Gaps = 46/268 (17%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKIS 1394
+++ CYFTNWA YRPG G+++ + + F +
Sbjct: 1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIY-------------------AFAGMQ 41
Query: 1395 ELTYV-----HILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIE 1447
+ Y+ LK K +K LAIGGWN ++ +V++ RQ FI
Sbjct: 42 NNEITTIEWNDVTLYQAFNGLKNKNSQLKTLLAIGGWNFG-TAPFTAMVSTPENRQTFIT 100
Query: 1448 HVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG------ 1501
V+KFL +Y+FDGLD DWEYP P DK F + V+E+ +AF+
Sbjct: 101 SVIKFLRQYEFDGLDFDWEYP-----GSRGSPPQDKHLFTVLVQEMREAFEQEAKQINKP 155
Query: 1502 -LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDD-- 1558
L+++AAV+ I + Y++ LS+ LD+I VMTYD HG W+ TG +PLY++P D
Sbjct: 156 RLMVTAAVAAGISNIQSGYEIPQLSQYLDYIHVMTYDLHGSWEGYTGENSPLYKYPTDTG 215
Query: 1559 DFFYFNANFTMNYWMKKGAPSRKLVMGV 1586
Y N ++ MNYW GAP+ KL++G
Sbjct: 216 SNAYLNVDYVMNYWKDNGAPAEKLIVGF 243
Score = 158 bits (402), Expect = 8e-42
Identities = 46/140 (32%), Positives = 67/140 (47%), Gaps = 2/140 (1%)
Query: 695 TLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQG 754
L G+GA T G G AG Y ++ G+ AYYEIC +K T + P+ +QG
Sbjct: 251 ILSNPSNTGIGAPTSGAGPAGPYAKESGIWAYYEICTFLKN-GATQGWDAPQEVPYAYQG 309
Query: 755 DQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCME-SFPLLRAVNRAFGRL 813
+ WV Y++ S K +++K N + G M W IDLDDF C + FPL+ + +A G
Sbjct: 310 NVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDLDDFTGTFCNQGKFPLISTLKKALGLQ 369
Query: 814 KDKKPSAPDCTRPTVSTPSP 833
+ P + P
Sbjct: 370 SASCTAPAQPIEPITAAPGS 389
Score = 144 bits (364), Expect = 8e-37
Identities = 45/129 (34%), Positives = 72/129 (55%), Gaps = 8/129 (6%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGF 2249
Y++ CY+T+WA R G++ P+DI+ LCTHL+YAFA + E+ N +
Sbjct: 1 YQLTCYFTNWAQYRPGLGRFMPDDINPCLCTHLIYAFAGMQNNEITTIEWN-----DVTL 55
Query: 2250 YEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGL 2307
Y+ K ++ +LAIGGW+ + ++ +V+ R+ F+ V +FL Y F+GL
Sbjct: 56 YQAFNGLKNKNSQLKTLLAIGGWNFG-TAPFTAMVSTPENRQTFITSVIKFLRQYEFDGL 114
Query: 2308 EFAWEYPKC 2316
+F WEYP
Sbjct: 115 DFDWEYPGS 123
Score = 101 bits (254), Expect = 1e-22
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 3/97 (3%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDL 2379
C+ +K+ T D+ PYAY G +W+ YD+ + K + +K + GGAMVW+IDL
Sbjct: 286 CTFLKN-GATQGWDA-PQEVPYAYQGNVWVGYDNVKSFDIKAQWLKHNKFGGAMVWAIDL 343
Query: 2380 DDFQN-LCSCGPYPLLSAVNYELRNTTLNYEPKDCTL 2415
DDF C+ G +PL+S + L + + +
Sbjct: 344 DDFTGTFCNQGKFPLISTLKKALGLQSASCTAPAQPI 380
Score = 50.5 bits (121), Expect = 4e-06
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCC 897
+++K N + G M W IDLDDF C
Sbjct: 325 AQWLKHNKFGGAMVWAIDLDDFTGTFC 351
>4ay1_A Chitinase-3-like protein 2; chilectin, lectin, chitooligosaccharide,
pseudochitinase, HY; HET: NAG; 1.95A {Homo sapiens}
Length = 365
Score = 469 bits (1209), Expect = e-150
Identities = 141/383 (36%), Positives = 221/383 (57%), Gaps = 34/383 (8%)
Query: 1711 FKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
+K+VCYFTNW+ RQ GK+ P +ID LC+H+IY FA ++ ++++IK +
Sbjct: 2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKS-----EVML 56
Query: 1771 YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGL 1828
Y+ + +LK K +K+ L+IGG+ + +V+S +R +FI ++ F+ HNFDGL
Sbjct: 57 YQTINSLKTKNPKLKILLSIGGYLFG-SKGFHPMVDSSTSRLEFINSIILFLRNHNFDGL 115
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN-------PHDLLLSAAVSPSKAV 1881
D+ W YP + F LI EL AF LLL+A VS + +
Sbjct: 116 DVSWIYPD----------QKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQM 165
Query: 1882 IDNAYDIPVMSENLDWISVMTYDYHGQWDKK--TGHVAPMYALPNDTTPT--FNANYSLH 1937
IDN+Y + ++++LD+I+++++D+HG W+K TGH +P+ D P+ +N Y++
Sbjct: 166 IDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAVG 225
Query: 1938 YWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICD 1997
YW+ G +KV+ G+P YG SFTLA + + G AG T + GFLAYYEIC
Sbjct: 226 YWIHKGMPSEKVVMGIPTYGHSFTLASAE-TTVGAPASGPGAAGPITESSGFLAYYEICQ 284
Query: 1998 KIQKDGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDD 2057
++ ++D++ PYA KG+QWVG+DD + K +F+K +LGGAMIW++D+DD
Sbjct: 285 FLKGAKITRLQDQQ---VPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDD 341
Query: 2058 FK-NFCGCESYPLLKTINRVLRN 2079
F C YPL++ + R L +
Sbjct: 342 FTGKSCNQGPYPLVQAVKRSLGS 364
Score = 355 bits (912), Expect = e-110
Identities = 137/443 (30%), Positives = 212/443 (47%), Gaps = 93/443 (20%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
K+VCY TNWS R+ GKF PENID LC+H++Y+FAS++ N + I+ + + Y
Sbjct: 3 KLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKS-----EVMLY 57
Query: 444 QRISSSPLVT-HGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
Q I+S L T + K+KIL++IGG+ S + + ++ S ++R +FI S++ FLR +F G
Sbjct: 58 QTINS--LKTKNPKLKILLSIGGYLFGS-KGFHPMVDSSTSRLEFINSIILFLRNHNFDG 114
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFD-------KHDYSIAVGISGYKE 555
L W YP + + +F LI EL F K + G+S ++
Sbjct: 115 LDVSWIYPD----------QKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSAGRQ 164
Query: 556 ILEVAYDFPALNDHVEFMSLMSYDYHGAWEG--ITGLVSPLNSRPGEPYPN--YNINTAL 611
+++ +Y L ++F++L+S+D+HG+WE ITG SPL+ + P+ YN+ A+
Sbjct: 165 MIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQDRGPSSYYNVEYAV 224
Query: 612 KLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEIC 671
G K+V +G + Y
Sbjct: 225 GYWIHKGMPSEKVV-------------------MG------------------IPTY--- 244
Query: 672 YRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICY 731
+T+ E +GA GPG AG T+ G LAYYEIC
Sbjct: 245 ----GHSFTLA----------------SAETTVGAPASGPGAAGPITESSGFLAYYEICQ 284
Query: 732 RIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDF 791
+K + R P+ +G+QWV Y+D S+ KV+F+K+ G M W+ID+DDF
Sbjct: 285 FLK--GAKITRLQDQQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDMDDF 342
Query: 792 HNKCC-MESFPLLRAVNRAFGRL 813
K C +PL++AV R+ G L
Sbjct: 343 TGKSCNQGPYPLVQAVKRSLGSL 365
Score = 278 bits (714), Expect = 9e-84
Identities = 105/388 (27%), Positives = 179/388 (46%), Gaps = 51/388 (13%)
Query: 13 HQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGG 72
+++VCY S R P F +N+ P C+H+IY++A+I+ + +
Sbjct: 2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKSEV-----ML 56
Query: 73 YKSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLD 126
Y++ LK NP+LK+ L++ F + SRL FI+S++ + FDGLD
Sbjct: 57 YQTINSLKTKNPKLKILLSIGGYLFGSKGFHPMVDSSTSRLEFINSIILFLRNHNFDGLD 116
Query: 127 LNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLRRN-------NYQLTLTSPG 176
+ P E + F+ I EL+ +++ LT
Sbjct: 117 V---SWIYPD------------QKENTHFTVLIHELAEAFQKDFTKSTKERLLLTAGVSA 161
Query: 177 VIDRKTSLVDISVVAPLVDLILLKSF------NNDHMDDEVVPVKPNTKVNIQVTSTIAN 230
+ + +A +D I L SF + P+ + ++
Sbjct: 162 GRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQD-----RGPSS 216
Query: 231 FNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPG 290
+ N+E AV WI KG E++++GIP +G S+ L + +E +GA GPG G T+ G
Sbjct: 217 YYNVEYAVGYWIHKGMPSEKVVMGIPTYGHSFTLAS-AETTVGAPASGPGAAGPITESSG 275
Query: 291 YLAFFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAML 350
+LA++E+C K D P+ VK ++W+ Y++ S+ K+ ++K+ +LGGAM+
Sbjct: 276 FLAYYEICQFLKGAKITRLQDQQV-PYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMI 334
Query: 351 WTLDLDDFRGFC--GQKYPLLSAVVSNL 376
W++D+DDF G YPL+ AV +L
Sbjct: 335 WSIDMDDFTGKSCNQGPYPLVQAVKRSL 362
Score = 256 bits (655), Expect = 1e-75
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 53/270 (19%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKIS 1394
+K+VCYFTNW+ R GK+ + + + +F I
Sbjct: 2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIY-------------------SFASIE 42
Query: 1395 ELTYV-----HILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIE 1447
+ ++ Y+ + +LK K +K+ L+IGG+ + +V+S+T+R FI
Sbjct: 43 NNKVIIKDKSEVMLYQTINSLKTKNPKLKILLSIGGYLFG-SKGFHPMVDSSTSRLEFIN 101
Query: 1448 HVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFK-------PH 1500
++ FL + FDGLD+ W YP + F + + EL +AF+
Sbjct: 102 SIILFLRNHNFDGLDVSWIYPD----------QKENTHFTVLIHELAEAFQKDFTKSTKE 151
Query: 1501 GLLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKK--TGHVAPLYEHPDD 1558
LLL+A VS +Q+I+ +Y V+ L++ LD+I+++++D+HG W+K TGH +PL + D
Sbjct: 152 RLLLTAGVSAGRQMIDNSYQVEKLAKDLDFINLLSFDFHGSWEKPLITGHNSPLSKGWQD 211
Query: 1559 --DFFYFNANFTMNYWMKKGAPSRKLVMGV 1586
Y+N + + YW+ KG PS K+VMG+
Sbjct: 212 RGPSSYYNVEYAVGYWIHKGMPSEKVVMGI 241
Score = 150 bits (381), Expect = 3e-39
Identities = 42/127 (33%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGF 2249
YK++CY+T+W+ RQ GK++PE+ID LC+HL+Y+FA ++ +++I+ + E
Sbjct: 2 YKLVCYFTNWSQDRQEPGKFTPENIDPFLCSHLIYSFASIENNKVIIKDKS-----EVML 56
Query: 2250 YEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGL 2307
Y+ I K ++++L+IGG+ S + +V+ +R F+ + FL + F+GL
Sbjct: 57 YQTINSLKTKNPKLKILLSIGGYLFG-SKGFHPMVDSSTSRLEFINSIILFLRNHNFDGL 115
Query: 2308 EFAWEYP 2314
+ +W YP
Sbjct: 116 DVSWIYP 122
Score = 101 bits (254), Expect = 1e-22
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDL 2379
C +K + T ++D + PYA G W+ YDD + + K + +K LGGAM+WSID+
Sbjct: 283 CQFLKGAKITRLQD---QQVPYAVKGNQWVGYDDVKSMETKVQFLKNLNLGGAMIWSIDM 339
Query: 2380 DDFQ-NLCSCGPYPLLSAVNYELRN 2403
DDF C+ GPYPL+ AV L +
Sbjct: 340 DDFTGKSCNQGPYPLVQAVKRSLGS 364
Score = 51.5 bits (124), Expect = 2e-06
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCC 897
V+F+K+ G M W+ID+DDF K C
Sbjct: 321 VQFLKNLNLGGAMIWSIDMDDFTGKSC 347
>2pi6_A Chitinase-3-like protein 1; complex, signaling protein; HET: NAG MAN;
1.65A {Ovis aries} SCOP: c.1.8.5 d.26.3.1 PDB: 2dpe_A*
1sr0_A* 1zl1_A* 1zbk_A* 2dsu_A* 2dsv_A* 2dsw_A* 2fdm_A*
2g41_A* 2g8z_A* 2dt1_A* 1zbv_A* 1zu8_A* 2aos_A* 2b31_A*
1zbw_A* 2dt0_A* 2dsz_A* 2dt2_A* 2dt3_A* ...
Length = 361
Score = 468 bits (1206), Expect = e-149
Identities = 148/378 (39%), Positives = 214/378 (56%), Gaps = 31/378 (8%)
Query: 1711 FKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
+K++CY+T+W+ YR+ G P ID LCTHVIY FA + +++ DTW D
Sbjct: 1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEI-----DTWEWNDVTL 55
Query: 1771 YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGL 1828
Y+ + LK + +K L++GGWN ++S++ + Q+R FI V F+ H FDGL
Sbjct: 56 YDTLNTLKNRNPKLKTLLSVGGWNFG-PERFSKIASKTQSRRTFIKSVPPFLRTHGFDGL 114
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN------PHDLLLSAAVSPSKAVI 1882
DL W YP DK+ L+KE++A F LLLSAAVS K I
Sbjct: 115 DLAWLYPG----------RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIAI 164
Query: 1883 DNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDT-TPTFNANYSLHYWVS 1941
D YDI +S +LD+IS++TYD+HG W + GH +P++ D + NA+Y++ Y +
Sbjct: 165 DRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASSRFSNADYAVSYMLR 224
Query: 1942 HGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQK 2001
GA K++ G+P +G+SFTLA + + G G T+ +G LAYYEICD +
Sbjct: 225 LGAPANKLVMGIPTFGRSFTLASSK-TDVGAPVSGPGIPGRFTKEKGILAYYEICDFLHG 283
Query: 2002 DGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKN- 2060
RD++ PYA KG+QWV +DDQ + +KA ++K L GAM+WALDLDDF+
Sbjct: 284 ATTHRFRDQQ---VPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDLDDFRGT 340
Query: 2061 FCGC-ESYPLLKTINRVL 2077
FCG ++PL + VL
Sbjct: 341 FCGQNLTFPLTSAVKDVL 358
Score = 365 bits (938), Expect = e-113
Identities = 127/439 (28%), Positives = 198/439 (45%), Gaps = 90/439 (20%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
K++CY T+WS R+ DG P+ ID LCTH++Y FA++ N + D Y
Sbjct: 2 KLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEID-----TWEWNDVTLY 56
Query: 444 QRISSSPL-VTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
+++ L + K+K L+++GGW E++S++ S +R+ FIKSV FLR F G
Sbjct: 57 DTLNT--LKNRNPKLKTLLSVGGWNFGP-ERFSKIASKTQSRRTFIKSVPPFLRTHGFDG 113
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFD------KHDYSIAVGISGYKEI 556
L W YP + DK + L++E+KAEF ++ +S K
Sbjct: 114 LDLAWLYPG----------RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAGKIA 163
Query: 557 LEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPN-YNINTALKLID 615
++ YD ++ H++F+SL++YD+HGAW G SPL + N + A+ +
Sbjct: 164 IDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASSRFSNADYAVSYML 223
Query: 616 ELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIK 675
LG K+V+G+P +G+S+TL + +GA GPG+ G +T++ G+LAYYEIC +
Sbjct: 224 RLGAPANKLVMGIPTFGRSFTLA-SSKTDVGAPVSGPGIPGRFTKEKGILAYYEICDFLH 282
Query: 676 TRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKT 735
T R P Y K
Sbjct: 283 --GATTHRFRDQQVP----------------------------------------YATKG 300
Query: 736 RKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKC 795
+W V+Y+D S+ K +++K+ AG M W +DLDDF
Sbjct: 301 NQW-------------------VAYDDQESVKNKARYLKNRQLAGAMVWALDLDDFRGTF 341
Query: 796 CME--SFPLLRAVNRAFGR 812
C + +FPL AV
Sbjct: 342 CGQNLTFPLTSAVKDVLAE 360
Score = 275 bits (706), Expect = 1e-82
Identities = 108/386 (27%), Positives = 172/386 (44%), Gaps = 50/386 (12%)
Query: 13 HQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGG 72
++++CY + S YR + + P CTHVIY +A I D
Sbjct: 1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEI-----DTWEWNDVTL 55
Query: 73 YKSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLD 126
Y + LK NP+LK L+V F I S +SR FI SV + FDGLD
Sbjct: 56 YDTLNTLKNRNPKLKTLLSVGGWNFGPERFSKIASKTQSRRTFIKSVPPFLRTHGFDGLD 115
Query: 127 LNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLRRN------NYQLTLTSPGV 177
L P ++ +T ++E+ + R L+
Sbjct: 116 L---AWLYPG------------RRDKRHLTTLVKEMKAEFIREAQAGTEQLLLSAAVSAG 160
Query: 178 IDRKTSLVDISVVAPLVDLILLKSFNN----DHMDDEVVPVKPNTKVNIQVTSTIANFNN 233
DI+ ++ +D I L +++ P+ + + F+N
Sbjct: 161 KIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNE------DASSRFSN 214
Query: 234 IESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLA 293
+ AV ++ GA ++++GIP FG+S+ L + S+ +GA V GPG G++T+ G LA
Sbjct: 215 ADYAVSYMLRLGAPANKLVMGIPTFGRSFTLAS-SKTDVGAPVSGPGIPGRFTKEKGILA 273
Query: 294 FFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTL 353
++E+C+ T F D P+ K ++W+ Y++ +S++ K Y+K+R L GAM+W L
Sbjct: 274 YYEICDFLHGATTHRFRDQQV-PYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWAL 332
Query: 354 DLDDFRGFC---GQKYPLLSAVVSNL 376
DLDDFRG +PL SAV L
Sbjct: 333 DLDDFRGTFCGQNLTFPLTSAVKDVL 358
Score = 261 bits (668), Expect = 1e-77
Identities = 83/266 (31%), Positives = 128/266 (48%), Gaps = 49/266 (18%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKIS 1394
+K++CY+T+W+ YR G G + + TF IS
Sbjct: 1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIY-------------------TFANIS 41
Query: 1395 ELTYVHIL-----FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIE 1447
Y+ + TLK + +K L++GGWN ++S++ + +R+ FI+
Sbjct: 42 NNEIDTWEWNDVTLYDTLNTLKNRNPKLKTLLSVGGWNFG-PERFSKIASKTQSRRTFIK 100
Query: 1448 HVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAF------KPHG 1501
V FL + FDGLDL W YP DK V+E+ F
Sbjct: 101 SVPPFLRTHGFDGLDLAWLYPG----------RRDKRHLTTLVKEMKAEFIREAQAGTEQ 150
Query: 1502 LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFF 1561
LLLSAAVS K I+ YD+ +S LD+IS++TYD+HG W + GH +PL+ +D
Sbjct: 151 LLLSAAVSAGKIAIDRGYDIAQISRHLDFISLLTYDFHGAWRQTVGHHSPLFRGNEDASS 210
Query: 1562 -YFNANFTMNYWMKKGAPSRKLVMGV 1586
+ NA++ ++Y ++ GAP+ KLVMG+
Sbjct: 211 RFSNADYAVSYMLRLGAPANKLVMGI 236
Score = 145 bits (369), Expect = 1e-37
Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 8/128 (6%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGF 2249
YK+ICYYTSW+ R+ +G P+ ID LCTH++Y FA++ E+ N+
Sbjct: 1 YKLICYYTSWSQYREGDGSCFPDAIDPFLCTHVIYTFANISNNEIDTWEWNDV-----TL 55
Query: 2250 YEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGL 2307
Y+ + K ++ +L++GGW+ +++S++ + +RR F++ V FL +GF+GL
Sbjct: 56 YDTLNTLKNRNPKLKTLLSVGGWNFG-PERFSKIASKTQSRRTFIKSVPPFLRTHGFDGL 114
Query: 2308 EFAWEYPK 2315
+ AW YP
Sbjct: 115 DLAWLYPG 122
Score = 99.3 bits (248), Expect = 6e-22
Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDL 2379
C + T R + PYA G W++YDD ++ K + +K L GAMVW++DL
Sbjct: 278 CDFLHG--ATTHRFR-DQQVPYATKGNQWVAYDDQESVKNKARYLKNRQLAGAMVWALDL 334
Query: 2380 DDFQNLCSCG---PYPLLSAVNYEL 2401
DDF+ CG +PL SAV L
Sbjct: 335 DDFRGTF-CGQNLTFPLTSAVKDVL 358
Score = 55.4 bits (134), Expect = 1e-07
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCCMDKSRF 903
+++K+ AG M W +DLDDF C F
Sbjct: 316 ARYLKNRQLAGAMVWALDLDDFRGTFCGQNLTF 348
>1jnd_A Imaginal DISC growth factor-2; IDGF, chitinase, insulin recep
heparin, hormone-growth factor complex; HET: NAG BMA MAN;
1.30A {Drosophila melanogaster} SCOP: c.1.8.5 d.26.3.1
PDB: 1jne_A*
Length = 420
Score = 448 bits (1154), Expect = e-142
Identities = 107/419 (25%), Positives = 190/419 (45%), Gaps = 54/419 (12%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDID--SDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNK 1769
+VCY+ + ++ R+ GK L D++ C+H++YG+A L + L + D+
Sbjct: 3 NLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYKH 62
Query: 1770 FYEKVTALKKK--GVKVTLAIGGWNDSA---GNKYSRLV-NSQQARSKFIAHVVNFILEH 1823
+ +VT+LK+K +KV L++GG +D NKY L+ + + FI + +
Sbjct: 63 QFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKTY 122
Query: 1824 NFDGLDLDWEYPK------------CWQVDCKQ---------GPASDKQGFADLIKELRA 1862
FDGLDL +++PK W+ K A K+ F L+++++
Sbjct: 123 GFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVKD 182
Query: 1863 AFNPHDLLLSAAVSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQW--DKKTGHVAPMY 1920
+ LLS V P+ +DIP ++ +D++++ T+D+ ++ + AP+Y
Sbjct: 183 SLRADGFLLSLTVLPNVNSTWY-FDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPIY 241
Query: 1921 ALPNDTT--PTFNANYSLHYWVSHGADRKKVIFGMPMYGQSFTLADKNKN---GLNSQTY 1975
NA++ + YW+S G K+ G+ YG ++ L + + +T
Sbjct: 242 HPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPVVPETS 301
Query: 1976 GGAEAGENTRARGFLAYYEICDKIQKDGWVV----------VRDRKRRIGPYAFK----- 2020
G A G ++ G L+Y EIC K+ V D +R G A++
Sbjct: 302 GPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAYRPVDGQ 361
Query: 2021 --GDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVL 2077
WV +DD +KA + + +LGG ++ L DDF+ C + YP+L+ I L
Sbjct: 362 ITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAIKYRL 420
Score = 364 bits (935), Expect = e-112
Identities = 96/464 (20%), Positives = 173/464 (37%), Gaps = 83/464 (17%)
Query: 383 PKVVCYVTNWSGSRKSDGKFVPENID--YKLCTHIVYAFASLDPNTLSIQAGNPEADIDD 440
+VCY + S +R+ GK + +++ + C+H+VY +A L L + N DI
Sbjct: 2 SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYK 61
Query: 441 NFYQRISSSPLV-THGKVKILIAIGGWTDSS---GEKYSQLI-SSGSNRKKFIKSVLTFL 495
+ + ++S L + +K+L+++GG D KY L+ + FI+S +
Sbjct: 62 HQFSEVTS--LKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELV 119
Query: 496 RRFDFAGLHFDWNYP---------------------VCWQADCSKQHKADKGNFVKLIQE 534
+ + F GL + +P K F L+++
Sbjct: 120 KTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRD 179
Query: 535 LKAEFDKHDY--SIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWE--GITGL 590
+K + S+ V + +D PALN V+F++L ++D+
Sbjct: 180 VKDSLRADGFLLSLTVLPNVNSTW---YFDIPALNGLVDFVNLATFDFLTPARNPEEADY 236
Query: 591 VSPLNSRPGEP--YPNYNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEH---GL 645
+P+ G + N + ++ G KI +GV YG ++ L D +
Sbjct: 237 SAPIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVPV 296
Query: 646 GAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLG 705
ET GP G +Q+PG+L+Y EIC ++ + + E L
Sbjct: 297 VPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLK---------------GNESPLR 341
Query: 706 AETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTS 765
+D G +P WVSY+DP S
Sbjct: 342 RVSDPTKRFGGIAYRP--------------------------VDGQITEGIWVSYDDPDS 375
Query: 766 LTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRA 809
+ K + + G+ + + DDF +C + +P+LRA+
Sbjct: 376 ASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRAIKYR 419
Score = 272 bits (697), Expect = 1e-80
Identities = 95/425 (22%), Positives = 162/425 (38%), Gaps = 67/425 (15%)
Query: 13 HQVVCYVEAKSAYRHRPATFNVKNVIP--QTCTHVIYAYAAIDPVSRALIPEDLEYDVIK 70
+VCY ++ S R ++ Q C+H++Y YA + + + D+ K
Sbjct: 2 SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYK 61
Query: 71 GGYKSFLGLKEANPELKVYLAV-----------KSNFVSITSDRESRLNFISSVLEMFDM 119
+ LK P LKV L+V + ++ ++ FI S E+
Sbjct: 62 HQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKT 121
Query: 120 YKFDGLDL-------------------NVKDPALNDEDDDDLESIANERSDFSTFIQELS 160
Y FDGLDL L D A + F+ ++++
Sbjct: 122 YGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRDVK 181
Query: 161 STLRRNNYQLTLTSPGVIDRKTSLVDISVVAPLVDLILLKSF------NNDHMDDEVVPV 214
+LR + + L+LT ++ T DI + LVD + L +F N D P+
Sbjct: 182 DSLRADGFLLSLTVLPNVN-STWYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSAPI 240
Query: 215 KPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEY---G 271
+ N + V W+ +G +I +G+ +G +++L S
Sbjct: 241 YHPDG-----SKDRLAHLNADFQVEYWLSQGFPSNKINLGVATYGNAWKLTKDSGLEGVP 295
Query: 272 LGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGE---------------- 315
+ GP EG +Q PG L++ E+C K + + +
Sbjct: 296 VVPETSGPAPEGFQSQKPGLLSYAEICGKLSNPQNQFLKGNESPLRRVSDPTKRFGGIAY 355
Query: 316 ---PFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQ-KYPLLSA 371
+ + W++Y++ DS K Y + ++LGG L+ L DDFRG C KYP+L A
Sbjct: 356 RPVDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYDDFRGQCSGDKYPILRA 415
Query: 372 VVSNL 376
+ L
Sbjct: 416 IKYRL 420
Score = 246 bits (629), Expect = 1e-71
Identities = 67/278 (24%), Positives = 121/278 (43%), Gaps = 36/278 (12%)
Query: 1341 KIVCYFTNWAWYRPGKGKYVLKKVPWINILKLYVT-LQTGLGTDQEKENTFLKISELTYV 1399
+VCY+ + ++ R G GK P + I + + L G + + ++E +
Sbjct: 3 NLVCYYDSSSYTREGLGKL---LNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDI 59
Query: 1400 HILFYERVVTLKKK--GVKVSLAIGGWNDS---LGGKYSRLV-NSATARQRFIEHVVKFL 1453
+ + V +LK+K +KV L++GG +D KY L+ + FI + +
Sbjct: 60 YKHQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELV 119
Query: 1454 LKYQFDGLDLDWEYPT---------------------CWQVNCDAGPDSDKESFGLFVRE 1492
Y FDGLDL +++P D KE F VR+
Sbjct: 120 KTYGFDGLDLAYQFPKNKPRKVHGDLGLAWKSIKKLFTGDFIVDPHAALHKEQFTALVRD 179
Query: 1493 LHQAFKPHGLLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQW--DKKTGHVA 1550
+ + + G LLS V P+ +D+ AL+ +D++++ T+D+ ++ + A
Sbjct: 180 VKDSLRADGFLLSLTVLPNVNST-WYFDIPALNGLVDFVNLATFDFLTPARNPEEADYSA 238
Query: 1551 PLYEHPDD--DFFYFNANFTMNYWMKKGAPSRKLVMGV 1586
P+Y + NA+F + YW+ +G PS K+ +GV
Sbjct: 239 PIYHPDGSKDRLAHLNADFQVEYWLSQGFPSNKINLGV 276
Score = 149 bits (378), Expect = 2e-38
Identities = 43/134 (32%), Positives = 73/134 (54%), Gaps = 8/134 (5%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDID--GSLCTHLVYAFADLDEQELVIRSHNNKLDLEQ 2247
++CYY S +Y R+ GK D++ C+HLVY +A L + L S N LD+ +
Sbjct: 2 SNLVCYYDSSSYTREGLGKLLNPDLEIALQFCSHLVYGYAGLRGENLQAYSMNENLDIYK 61
Query: 2248 GFYEKIT--KFNERGIQVILAIGGWSDSR---SDKYSRLVNDIPARR-NFVRHVTEFLEF 2301
+ ++T K ++V+L++GG D +KY L+ R+ F+R E ++
Sbjct: 62 HQFSEVTSLKRKYPHLKVLLSVGGDHDIDPDHPNKYIDLLEGEKVRQIGFIRSAYELVKT 121
Query: 2302 YGFNGLEFAWEYPK 2315
YGF+GL+ A+++PK
Sbjct: 122 YGFDGLDLAYQFPK 135
Score = 94.5 bits (235), Expect = 5e-20
Identities = 25/81 (30%), Positives = 34/81 (41%), Gaps = 7/81 (8%)
Query: 2328 WTVVRDSLGARGPYAY-------NGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLD 2380
V D G AY +W+SYDD K + LGG ++ + D
Sbjct: 340 LRRVSDPTKRFGGIAYRPVDGQITEGIWVSYDDPDSASNKAAYARVKNLGGVALFDLSYD 399
Query: 2381 DFQNLCSCGPYPLLSAVNYEL 2401
DF+ CS YP+L A+ Y L
Sbjct: 400 DFRGQCSGDKYPILRAIKYRL 420
Score = 52.1 bits (125), Expect = 2e-06
Identities = 7/30 (23%), Positives = 13/30 (43%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCCMDK 900
+ + G+ + + DDF +C DK
Sbjct: 380 AAYARVKNLGGVALFDLSYDDFRGQCSGDK 409
>3aqu_A AT4G19810; stress response, TIM barrel, hydrolase, chitin; HET: FLC;
2.01A {Arabidopsis thaliana}
Length = 356
Score = 437 bits (1126), Expect = e-139
Identities = 94/371 (25%), Positives = 154/371 (41%), Gaps = 34/371 (9%)
Query: 1721 AWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKK 1780
A Y ++ +DIDS L TH+ FA L++ + KF ++++
Sbjct: 7 ASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSAN---QPKFSTFTQTVQRR 63
Query: 1781 --GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCW 1838
VK L+IGG Y+ + ++ +R FI + + F GLDLDWEYP
Sbjct: 64 NPSVKTLLSIGGGIAD-KTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP--- 119
Query: 1839 QVDCKQGPASDKQGFADLIKELRAAFN-------PHDLLLSAAVSPSKAVIDNAYDIPVM 1891
A++ F L++E R+A LLL+AAV S Y + +
Sbjct: 120 ------SSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVLYPVSAV 173
Query: 1892 SENLDWISVMTYDYHGQ-WDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKVI 1950
+ +LDW+++M YD++G W + TG A ++ N + + W+ G KK +
Sbjct: 174 ASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG---PSGDAGTRSWIQAGLPAKKAV 230
Query: 1951 FGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRDR 2010
G P YG ++ L + N + Y G G + Y +I I +G V +
Sbjct: 231 LGFPYYGYAWRLTNANSHS-----YYAPTTGAAISPDGSIGYGQIRKFIVDNGATTVYN- 284
Query: 2011 KRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGC--ESYP 2068
+G Y + G W+G+DD I K + K L G W + DD +++
Sbjct: 285 STVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAWD 344
Query: 2069 LLKTINRVLRN 2079
R ++
Sbjct: 345 ATTATTRTIQK 355
Score = 268 bits (687), Expect = 3e-80
Identities = 72/315 (22%), Positives = 122/315 (38%), Gaps = 34/315 (10%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
+ V + W +F +ID L TH+ AFA L+ T + + F
Sbjct: 2 QTVVKASYWFP----ASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFT 57
Query: 444 QRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGL 503
Q + + VK L++IGG Y+ + S+ ++RK FI S + R + F GL
Sbjct: 58 QTVQR----RNPSVKTLLSIGGGIADK-TAYASMASNPTSRKSFIDSSIRVARSYGFHGL 112
Query: 504 HFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFD-------KHDYSIAVGISGYKEI 556
DW YP + NF L++E ++ K +A +
Sbjct: 113 DLDWEYPS---------SATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNY 163
Query: 557 LEVAYDFPALNDHVEFMSLMSYDYHG-AWEGITGLVSPLNSRPGEPYPNYNINTALKLID 615
V Y A+ +++++LM+YD++G W +TG + L + + +
Sbjct: 164 YSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG---PSGDAGTRSWI 220
Query: 616 ELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIK 675
+ G +K V+G P+YG ++ L H A T G G + Y +I I
Sbjct: 221 QAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAA-----ISPDGSIGYGQIRKFIV 275
Query: 676 TRKWTVQRNTKSLEP 690
T N+ +
Sbjct: 276 DNGATTVYNSTVVGD 290
Score = 247 bits (633), Expect = 7e-73
Identities = 73/379 (19%), Positives = 141/379 (37%), Gaps = 51/379 (13%)
Query: 21 AKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGGYKSFLGLK 80
K++Y + F V ++ TH+ A+A ++ + + ++
Sbjct: 5 VKASYWFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKF---STFTQTVQ 61
Query: 81 EANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKD--- 131
NP +K L++ K+ + S+ S+ SR +FI S + + Y F GLDL D
Sbjct: 62 RRNPSVKTLLSIGGGIADKTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDL---DWEY 118
Query: 132 PALNDEDDDDLESIANERSDFSTFIQELSSTL-------RRNNYQLTLTSPGVIDRKTSL 184
P+ + + ++F T ++E S + + L + + L
Sbjct: 119 PS-SATE----------MTNFGTLLREWRSAVVAEASSSGKPRLLLAAAVFYSNNYYSVL 167
Query: 185 VDISVVAPLVDLILLKS--FNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWI 242
+S VA +D + L + F T + + ++ +WI
Sbjct: 168 YPVSAVASSLDWVNLMAYDFYGPGWS-------RVTGPPAALFDPSNAGPSGDAGTRSWI 220
Query: 243 KKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFK 302
+ G ++ ++G P++G ++RL N + + A G G + + ++
Sbjct: 221 QAGLPAKKAVLGFPYYGYAWRLTNANSHSYYAPTTGAAISP-----DGSIGYGQIRKFIV 275
Query: 303 DKTW-RHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGF 361
D + + + WI Y++N SI K+ Y K R L G W + DD G
Sbjct: 276 DNGATTVYNSTVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGL 335
Query: 362 C---GQKYPLLSAVVSNLQ 377
Q + +A +Q
Sbjct: 336 SRAASQAWDATTATTRTIQ 354
Score = 234 bits (600), Expect = 2e-68
Identities = 65/279 (23%), Positives = 112/279 (40%), Gaps = 58/279 (20%)
Query: 1350 AWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKISELTYVHIL-- 1402
A Y ++ + + + F ++ T +
Sbjct: 7 ASYWFPASEFPVTDIDSSLFTHLFC-------------------AFADLNSQTNQVTVSS 47
Query: 1403 -----FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLK 1455
F T++++ VK L+IGG Y+ + ++ T+R+ FI+ ++
Sbjct: 48 ANQPKFSTFTQTVQRRNPSVKTLLSIGGGIAD-KTAYASMASNPTSRKSFIDSSIRVARS 106
Query: 1456 YQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG-------LLLSAAV 1508
Y F GLDLDWEYP ++ +FG +RE A LLL+AAV
Sbjct: 107 YGFHGLDLDWEYP---------SSATEMTNFGTLLREWRSAVVAEASSSGKPRLLLAAAV 157
Query: 1509 SPSKQVINAAYDVKALSESLDWISVMTYDYHGQ-WDKKTGHVAPLYEHPDDDFFYFNANF 1567
S + Y V A++ SLDW+++M YD++G W + TG A L++ + + +
Sbjct: 158 FYSNNYYSVLYPVSAVASSLDWVNLMAYDFYGPGWSRVTGPPAALFDPSNAG---PSGDA 214
Query: 1568 TMNYWMKKGAPSRKLVMGVHPLLS---TITEVLGHGPGG 1603
W++ G P++K V+G P +T H
Sbjct: 215 GTRSWIQAGLPAKKAVLGF-PYYGYAWRLTNANSHSYYA 252
Score = 134 bits (339), Expect = 7e-34
Identities = 26/121 (21%), Positives = 45/121 (37%), Gaps = 7/121 (5%)
Query: 695 TLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQG 754
L H A T G G + Y +I I T N+ + + + G
Sbjct: 241 RLTNANSHSYYAPTTGAA-----ISPDGSIGYGQIRKFIVDNGATTVYNSTVVGDYCYAG 295
Query: 755 DQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHN--KCCMESFPLLRAVNRAFGR 812
W+ Y+D S+ KV++ K G G +W + DD + +++ A R +
Sbjct: 296 TNWIGYDDNQSIVTKVRYAKQRGLLGYFSWHVGADDNSGLSRAASQAWDATTATTRTIQK 355
Query: 813 L 813
+
Sbjct: 356 V 356
Score = 113 bits (284), Expect = 1e-26
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 2203 RQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFYEKITKFNERGIQ 2262
++ DID SL THL AFADL+ Q + + F + + + N ++
Sbjct: 10 WFPASEFPVTDIDSSLFTHLFCAFADLNSQTNQVTVSSANQPKFSTFTQTVQRRN-PSVK 68
Query: 2263 VILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYP 2314
+L+IGG Y+ + ++ +R++F+ YGF+GL+ WEYP
Sbjct: 69 TLLSIGGGIAD-KTAYASMASNPTSRKSFIDSSIRVARSYGFHGLDLDWEYP 119
Score = 103 bits (260), Expect = 1e-23
Identities = 25/95 (26%), Positives = 36/95 (37%), Gaps = 6/95 (6%)
Query: 2311 WEYPKCWQTCSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLG 2370
Y Q + + T V +S G Y Y G W+ YDD + I K + KQ GL
Sbjct: 265 IGY---GQIRKFIVDNGATTVYNS-TVVGDYCYAGTNWIGYDDNQSIVTKVRYAKQRGLL 320
Query: 2371 GAMVWSIDLDDFQNLCSC--GPYPLLSAVNYELRN 2403
G W + DD L + +A ++
Sbjct: 321 GYFSWHVGADDNSGLSRAASQAWDATTATTRTIQK 355
Score = 45.7 bits (109), Expect = 1e-04
Identities = 7/27 (25%), Positives = 11/27 (40%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCC 897
V++ K G G +W + DD
Sbjct: 311 VRYAKQRGLLGYFSWHVGADDNSGLSR 337
>3alf_A Chitinase, class V; hydrolase; 1.20A {Nicotiana tabacum} PDB: 3alg_A*
Length = 353
Score = 426 bits (1098), Expect = e-135
Identities = 94/369 (25%), Positives = 152/369 (41%), Gaps = 32/369 (8%)
Query: 1721 AWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKK 1780
Y ++IDS L TH+ FA L+ + D +F + +++K
Sbjct: 6 GGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQF---TSTVQRK 62
Query: 1781 --GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCW 1838
VK L+I G + Y + +R FI + + F GLDLDWEYP
Sbjct: 63 NPSVKTFLSIAGGRAN-STAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYP--- 118
Query: 1839 QVDCKQGPASDKQGFADLIKELRAAFNP-------HDLLLSAAVSPSKAVIDNAYDIPVM 1891
A+D L+ E R A N LLL+AAVS S V Y + +
Sbjct: 119 ------LSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVESL 172
Query: 1892 SENLDWISVMTYDYHGQWD--KKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKV 1949
+ NLDWI++M YD++G +T A ++ N + + ++ W+ G KK+
Sbjct: 173 ARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVNH----VSGSDGINAWIQAGVPTKKL 228
Query: 1950 IFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRD 2009
+ G+P YG ++ L + N +GL + G + G G + Y I D I + V +
Sbjct: 229 VLGIPFYGYAWRLVNANIHGLRAPAAGKSNVG--AVDDGSMTYNRIRDYIVESRATTVYN 286
Query: 2010 RKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPL 2069
+G Y + G W+ +DD + +K +VK L G W + D +
Sbjct: 287 -ATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSR-TASQT 344
Query: 2070 LKTINRVLR 2078
+ ++
Sbjct: 345 WGVSFQEMK 353
Score = 267 bits (686), Expect = 3e-80
Identities = 69/304 (22%), Positives = 116/304 (38%), Gaps = 29/304 (9%)
Query: 396 RKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFYQRISSSPLVTHG 455
D NID L TH+ AFA L+P + D F + +
Sbjct: 9 WFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRK----NP 64
Query: 456 KVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYPVCWQA 515
VK ++I G +S Y + ++RK FI S + R+ F GL DW YP+
Sbjct: 65 SVKTFLSIAGGRANS-TAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYPL---- 119
Query: 516 DCSKQHKADKGNFVKLIQELKAEFD-------KHDYSIAVGISGYKEILEVAYDFPALND 568
AD N L+ E + + + + +S + + Y +L
Sbjct: 120 -----SAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNYPVESLAR 174
Query: 569 HVEFMSLMSYDYHGAW--EGITGLVSPLNSRPGEPYPNYNINTALKLIDELGGDKRKIVI 626
++++++LM+YD++G T + L + + + + + G +K+V+
Sbjct: 175 NLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVN----HVSGSDGINAWIQAGVPTKKLVL 230
Query: 627 GVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTK 686
G+PFYG ++ L HGL A G G G + Y I I + T N
Sbjct: 231 GIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVD--DGSMTYNRIRDYIVESRATTVYNAT 288
Query: 687 SLEP 690
+
Sbjct: 289 IVGD 292
Score = 250 bits (641), Expect = 5e-74
Identities = 71/374 (18%), Positives = 140/374 (37%), Gaps = 43/374 (11%)
Query: 22 KSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGGYKSFLGLKE 81
K Y + + + N+ TH+ A+A ++P LI D + ++
Sbjct: 5 KGGYWFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSF---RQFTSTVQR 61
Query: 82 ANPELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKD---P 132
NP +K +L++ + + + SR +FI S + + F GLDL D P
Sbjct: 62 KNPSVKTFLSIAGGRANSTAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDL---DWEYP 118
Query: 133 ALNDEDDDDLESIANERSDFSTFIQELSSTLR-------RNNYQLTLTSPGVIDRKTSLV 185
+ D ++ T + E + + R LT
Sbjct: 119 L-SAAD----------MTNLGTLLNEWRTAINTEARNSGRAALLLTAAVSNSPRVNGLNY 167
Query: 186 DISVVAPLVDLILLKSFNND-HMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKK 244
+ +A +D I L ++ D + + T + Q+ + + + + WI+
Sbjct: 168 PVESLARNLDWINLMAY--DFYGPNWSPSQ---TNSHAQLFDPVNHVS-GSDGINAWIQA 221
Query: 245 GARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDK 304
G +++++GIPF+G ++RL N + +GL A G G G + + + + +
Sbjct: 222 GVPTKKLVLGIPFYGYAWRLVNANIHGLRAPAAGKSNVGAVD--DGSMTYNRIRDYIVES 279
Query: 305 TW-RHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCG 363
+ + + WI+Y++ ++R K+NY+K R L G W + D G
Sbjct: 280 RATTVYNATIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLSR 339
Query: 364 QKYPLLSAVVSNLQ 377
++
Sbjct: 340 TASQTWGVSFQEMK 353
Score = 226 bits (579), Expect = 9e-66
Identities = 61/260 (23%), Positives = 106/260 (40%), Gaps = 56/260 (21%)
Query: 1350 AWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKISELTYVHIL-- 1402
Y L + + F ++ I+
Sbjct: 6 GGYWFKDSGLALNNIDSTLFTHLFC-------------------AFADLNPQLNQLIISP 46
Query: 1403 -----FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLK 1455
F + T+++K VK L+I G + Y + +R+ FI+ ++ +
Sbjct: 47 ENQDSFRQFTSTVQRKNPSVKTFLSIAGGRAN-STAYGIMARQPNSRKSFIDSSIRLARQ 105
Query: 1456 YQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG-------LLLSAAV 1508
F GLDLDWEYP +D + G + E A LLL+AAV
Sbjct: 106 LGFHGLDLDWEYP---------LSAADMTNLGTLLNEWRTAINTEARNSGRAALLLTAAV 156
Query: 1509 SPSKQVINAAYDVKALSESLDWISVMTYDYHGQWD--KKTGHVAPLYEHPDDDFFYFNAN 1566
S S +V Y V++L+ +LDWI++M YD++G +T A L++ + + + +
Sbjct: 157 SNSPRVNGLNYPVESLARNLDWINLMAYDFYGPNWSPSQTNSHAQLFDPVN----HVSGS 212
Query: 1567 FTMNYWMKKGAPSRKLVMGV 1586
+N W++ G P++KLV+G+
Sbjct: 213 DGINAWIQAGVPTKKLVLGI 232
Score = 127 bits (322), Expect = 1e-31
Identities = 28/122 (22%), Positives = 44/122 (36%), Gaps = 10/122 (8%)
Query: 695 TLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQG 754
L HGL A G G G + Y I I + T N + + + G
Sbjct: 240 RLVNANIHGLRAPAAGKSNVGAVD--DGSMTYNRIRDYIVESRATTVYNATIVGDYCYSG 297
Query: 755 DQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRLK 814
W+SY+D ++ KV ++K G G AW + D R ++ +G
Sbjct: 298 SNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAGDQNWGLS--------RTASQTWGVSF 349
Query: 815 DK 816
+
Sbjct: 350 QE 351
Score = 114 bits (288), Expect = 4e-27
Identities = 30/112 (26%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 2203 RQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFYEKITKFNERGIQ 2262
+ + +ID +L THL AFADL+ Q + D + F + + N ++
Sbjct: 9 WFKDSGLALNNIDSTLFTHLFCAFADLNPQLNQLIISPENQDSFRQFTSTVQRKN-PSVK 67
Query: 2263 VILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYP 2314
L+I G + S Y + +R++F+ GF+GL+ WEYP
Sbjct: 68 TFLSIAGGRAN-STAYGIMARQPNSRKSFIDSSIRLARQLGFHGLDLDWEYP 118
Score = 96.2 bits (240), Expect = 6e-21
Identities = 22/83 (26%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDL 2379
+ T V ++ G Y Y+G W+SYDDT+ +R K +K GL G W +
Sbjct: 273 RDYIVESRATTVYNA-TIVGDYCYSGSNWISYDDTQTVRNKVNYVKGRGLLGYFAWHVAG 331
Query: 2380 DDFQNLCSCGPYPLLSAVNYELR 2402
D L E++
Sbjct: 332 DQNWGLSRTA-SQTWGVSFQEMK 353
Score = 46.9 bits (112), Expect = 5e-05
Identities = 7/26 (26%), Positives = 10/26 (38%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKC 896
V ++K G G AW + D
Sbjct: 313 VNYVKGRGLLGYFAWHVAGDQNWGLS 338
>3qok_A Putative chitinase II; structural genomics, PSI-biology, midwest
center for structu genomics, MCSG, glycosyl hydrolases
family 18; 2.60A {Klebsiella pneumoniae subsp}
Length = 420
Score = 413 bits (1064), Expect = e-130
Identities = 83/409 (20%), Positives = 158/409 (38%), Gaps = 58/409 (14%)
Query: 1710 EFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVI---------KPH 1760
V YF G +D TH+ Y F ++ D+ H
Sbjct: 25 PLMSVGYFNGGGDVTA-GPGGDIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAHLH 83
Query: 1761 DTWADLDNK-FYEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVV 1817
+ W + +K+ AL+K+ +KV L++GGW +S + ++R+ FI
Sbjct: 84 EIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWGAR---GFSGAAATAESRAVFIRSAQ 140
Query: 1818 NFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSP 1877
I ++ DG+DLDWE+P +D+ F L+K LR A L++ AV
Sbjct: 141 KIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKSLREAVGEQ-KLVTIAVGA 199
Query: 1878 SKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPT----FNAN 1933
+ + D+ ++ L++I++MTYD + +Y + T ++A+
Sbjct: 200 NAESPKSWVDVKAVAPVLNYINLMTYDMAYGT---QYFNSNLYDSSHWPTVAAADKYSAD 256
Query: 1934 YSLHYWVSHGADRKKVIFGMPMYG----------QSFTLADKNKNGLNSQTYG------G 1977
+ ++ +++ G ++ G+ YG +T AD N + +G
Sbjct: 257 FVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGPQQIALF 316
Query: 1978 AEAGENTRARGFLAYYEICDKIQ---KDGWVVVRDRKRRIGPYAFKGDQ------WVGFD 2028
A G + ++ Y +I K+ + + D + + P+ + ++
Sbjct: 317 ASLGYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAK-VPWLSVQSAEGKPLFALSYE 375
Query: 2029 DQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVL 2077
+ + KA+++K L GAM W DD L + + L
Sbjct: 376 NPRSVAIKADYIKAKGLAGAMFWEYGADDQNQ--------LARQLAESL 416
Score = 315 bits (810), Expect = 9e-96
Identities = 81/485 (16%), Positives = 154/485 (31%), Gaps = 109/485 (22%)
Query: 365 KYPLLSA--VVSNLQPEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASL 422
+ PLL+A ++ V Y G + +D + TH+ Y+F +
Sbjct: 6 RLPLLAALPLLCASALSAQPLMSVGYFNGGGDVTAGPG-GDIDKLDVRQITHLNYSFGLI 64
Query: 423 DPNTLSIQAGNPEADIDDNFYQRISSSPLV------------THGKVKILIAIGGWTDSS 470
+ A D I SP V + +K+L+++GGW
Sbjct: 65 YNDEKDE---TNAALKDPAHLHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWGAR- 120
Query: 471 GEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVK 530
+S ++ +R FI+S ++++ G+ DW +PV AD+ NF
Sbjct: 121 --GFSGAAATAESRAVFIRSAQKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTA 178
Query: 531 LIQELKAEFDKHDYSIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGL 590
L++ L+ + + + + E + D A+ + +++LM+YD
Sbjct: 179 LLKSLREAVGEQ-KLVTIAVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYGT---QYF 234
Query: 591 VSPLNSRPGEPYPN----YNINTALKLIDELGGDKRKIVIGVPFYG----------QSYT 636
S L P Y+ + + G ++ +G+ FYG +T
Sbjct: 235 NSNLYDSSHWPTVAAADKYSADFVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWT 294
Query: 637 LKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTL 696
+ + + GP +
Sbjct: 295 KADAQNNPVTQPYFGPQQIALF-------------------------------------- 316
Query: 697 KLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRK---WTVQRNTKSLEPFTFQ 753
G + + Y +I ++ +T + ++ P+
Sbjct: 317 ---------------ASLGYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPWLSV 361
Query: 754 GDQ------WVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVN 807
+SYE+P S+ K +IK+ G AG M W DD + L R +
Sbjct: 362 QSAEGKPLFALSYENPRSVAIKADYIKAKGLAGAMFWEYGADDQNQ--------LARQLA 413
Query: 808 RAFGR 812
+ G
Sbjct: 414 ESLGI 418
Score = 259 bits (664), Expect = 3e-76
Identities = 61/316 (19%), Positives = 119/316 (37%), Gaps = 32/316 (10%)
Query: 1338 QYFKIVCYFTNWAWYRPGKGKYVLKKVPW----------INILKLYVTLQTGLGTDQEKE 1387
Q V YF G G + K+ I + K+
Sbjct: 24 QPLMSVGYFNGGGDVTAGPGGDI-DKLDVRQITHLNYSFGLI----YNDEKDETNAALKD 78
Query: 1388 NTFLKISELTYVHILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRF 1445
L L+ +++ L+K+ +KV L++GGW +S +A +R F
Sbjct: 79 PAHLHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWGAR---GFSGAAATAESRAVF 135
Query: 1446 IEHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLS 1505
I K + +Y DG+DLDWE+P A +D+++F ++ L +A L++
Sbjct: 136 IRSAQKIIQQYGLDGIDLDWEFPVNGAWGLVASQPADRDNFTALLKSLREAVGEQ-KLVT 194
Query: 1506 AAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFF---- 1561
AV + + + DVKA++ L++I++MTYD + LY+
Sbjct: 195 IAVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYGT---QYFNSNLYDSSHWPTVAAAD 251
Query: 1562 YFNANFTMNYWMKKGAPSRKLVMGVHPL---LSTITEVLGHGPGGNYESTTEEYKPTSEE 1618
++A+F +N ++ G ++ +G+ + G +P
Sbjct: 252 KYSADFVVNNYLAAGLKPSQMNLGI-GFYGRVPKRAVEPGIDWTKADAQNNPVTQPYFGP 310
Query: 1619 SKPTTVSTSTVVTTEE 1634
+ ++ +++
Sbjct: 311 QQIALFASLGYDLSKD 326
Score = 225 bits (575), Expect = 2e-64
Identities = 81/416 (19%), Positives = 146/416 (35%), Gaps = 71/416 (17%)
Query: 10 STKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDP-----VSRALIPEDL 64
+ V Y P ++ + + TH+ Y++ I + AL
Sbjct: 23 AQPLMSVGYFNGGGDVTAGPG-GDIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAH 81
Query: 65 EYDV-----IKGGYKSFLGLKEANPELKVYLAV----KSNFVSITSDRESRLNFISSVLE 115
+++ ++ + L++ NP+LKV L+V F + ESR FI S +
Sbjct: 82 LHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWGARGFSGAAATAESRAVFIRSAQK 141
Query: 116 MFDMYKFDGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTL 172
+ Y DG+DL D P S +R +F+ ++ L + +T+
Sbjct: 142 IIQQYGLDGIDL---DWEFPVNGAWGLV--ASQPADRDNFTALLKSLREAVGEQ-KLVTI 195
Query: 173 TSPGVIDRKTSLVDISVVAPLVDLILL------KSFNNDHMDDEVVPVKPNTKVNIQVTS 226
+ S VD+ VAP+++ I L + + T
Sbjct: 196 AVGANAESPKSWVDVKAVAPVLNYINLMTYDMAYGTQYFNS--------NLYDSSHWPTV 247
Query: 227 TIANFNNIESAVYNWIKKGARPEQIIIGIPFFG----------KSYRLFNRSEYGLGATV 276
A+ + + V N++ G +P Q+ +GI F+G + + +
Sbjct: 248 AAADKYSADFVVNNYLAAGLKPSQMNLGIGFYGRVPKRAVEPGIDWTKADAQNNPVTQPY 307
Query: 277 KGPGTE------GKYTQMPGYLAFFEVCNKFKDKTW----RHFTDSNGEPFMV------K 320
GP G Y+ + ++ K + H+ D P++ K
Sbjct: 308 FGPQQIALFASLGYDLSKDTYVKYNDIVGKLLNDPQKRFTEHWDDEAKVPWLSVQSAEGK 367
Query: 321 KDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNL 376
++YEN S+ K +YIK + L GAM W DD L + +L
Sbjct: 368 PLFALSYENPRSVAIKADYIKAKGLAGAMFWEYGADDQNQ-------LARQLAESL 416
Score = 124 bits (314), Expect = 4e-30
Identities = 29/143 (20%), Positives = 57/143 (39%), Gaps = 16/143 (11%)
Query: 2187 AEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLE 2246
A+P + Y+ + G + +D THL Y+F + E + K
Sbjct: 23 AQPLMSVGYFNGGGDVTAGPG-GDIDKLDVRQITHLNYSFGLIYNDEKDETNAALKDPAH 81
Query: 2247 ----------QGFYEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRH 2294
Q +K+ + ++V+L++GGW + +S +R F+R
Sbjct: 82 LHEIWLSPKVQADLQKLPALRKQNPDLKVLLSVGGWG---ARGFSGAAATAESRAVFIRS 138
Query: 2295 VTEFLEFYGFNGLEFAWEYPKCW 2317
+ ++ YG +G++ WE+P
Sbjct: 139 AQKIIQQYGLDGIDLDWEFPVNG 161
Score = 81.0 bits (200), Expect = 1e-15
Identities = 21/83 (25%), Positives = 28/83 (33%), Gaps = 7/83 (8%)
Query: 2311 WEYPKCWQTCSTVKSHEWTVVRDSLGARGPYAYNG------KLWLSYDDTRDIRRKCKSI 2364
+Y +T D A+ P+ LSY++ R + K I
Sbjct: 329 VKYNDIVGKLLNDPQKRFTEHWDDE-AKVPWLSVQSAEGKPLFALSYENPRSVAIKADYI 387
Query: 2365 KQDGLGGAMVWSIDLDDFQNLCS 2387
K GL GAM W DD L
Sbjct: 388 KAKGLAGAMFWEYGADDQNQLAR 410
Score = 44.4 bits (105), Expect = 4e-04
Identities = 9/26 (34%), Positives = 12/26 (46%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKC 896
+IK+ G AG M W DD +
Sbjct: 384 ADYIKAKGLAGAMFWEYGADDQNQLA 409
>1w9p_A Chitinase; peptide inhibitors, argifin, argadin, glycosidase,
hydrolase; 1.7A {Aspergillus fumigatus} SCOP: c.1.8.5
d.26.3.1 PDB: 1w9u_A* 1w9v_A* 2a3a_A* 2a3b_A* 2a3c_A*
2a3e_A* 2iuz_A* 3ch9_A 3chc_A* 3chd_A* 3che_A* 3chf_A*
1wno_A*
Length = 433
Score = 411 bits (1058), Expect = e-129
Identities = 105/436 (24%), Positives = 176/436 (40%), Gaps = 66/436 (15%)
Query: 1686 PTTTVKPKPTTVKPKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIY 1745
+ + T+ S + V YF NWA Y + + P D+ + THV+Y
Sbjct: 21 DAAVMWNRDTSSTDLEARASSGY---RSVVYFVNWAIYGR---NHNPQDLPVERLTHVLY 74
Query: 1746 GFAVLDTDQLVIKPHDTWADLDNKF---------------YEKVTALKKK--GVKVTLAI 1788
FA + + + D+WAD++ + +++ LKK+ +KV L+I
Sbjct: 75 AFANVRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSI 134
Query: 1789 GGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPAS 1848
GGW S ++ ++ R F V + + FDGLD+DWEYP+ Q
Sbjct: 135 GGWTYSP--NFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQ--------- 183
Query: 1849 DKQGFADLIKELRAAFNPH--------DLLLSAAVSPSKAVIDNAYDIPVMSENLDWISV 1900
F L+KE+R A + + LL+ A I + M + LD+ ++
Sbjct: 184 QANDFVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGPDKIKV-LHLKDMDQQLDFWNL 242
Query: 1901 MTYDYHGQWDKKTGHVAPMYALPNDTTPT-FNANYSLHYWVSHGADRKKVIFGMPMYGQS 1959
M YDY G + +GH A +Y ++ T FN +L + + G K++ GMP+YG+S
Sbjct: 243 MAYDYAGSFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLGMPLYGRS 302
Query: 1960 FTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRDRKRRIGPYAF 2019
F N +G + Y G G+ + G Y + G + Y++
Sbjct: 303 FA----NTDGPG-KPYNG--VGQGSWENGVWDYKALPQA----GATEHVL-PDIMASYSY 350
Query: 2020 KGD--QWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVL 2077
+ +D+ + + K+ ++K LGGAM W D + L+ T+ L
Sbjct: 351 DATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDKTGS------DSLITTVVNAL 404
Query: 2078 RNYPG--PGPNCFLKP 2091
N P
Sbjct: 405 GGTGVFEQSQNELDYP 420
Score = 299 bits (767), Expect = 7e-90
Identities = 98/461 (21%), Positives = 170/461 (36%), Gaps = 116/461 (25%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
+ V Y NW+ + P+++ + TH++YAFA++ P T + + ADI+ ++
Sbjct: 44 RSVVYFVNWAIYGR---NHNPQDLPVERLTHVLYAFANVRPETGEVYMTDSWADIEKHYP 100
Query: 444 QRISSSPLVT--------------HGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIK 489
S + +K+L++IGGWT S ++ S+ + RK F K
Sbjct: 101 GDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWTYS--PNFAPAASTDAGRKNFAK 158
Query: 490 SVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY----- 544
+ + L+ F GL DW YP Q +FV L++E++ D +
Sbjct: 159 TAVKLLQDLGFDGLDIDWEYPENDQ---------QANDFVLLLKEVRTALDSYSAANAGG 209
Query: 545 -----SIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPG 599
++A +G +I ++ ++F +LM+YDY G++ ++G + + +
Sbjct: 210 QHFLLTVASP-AGPDKI--KVLHLKDMDQQLDFWNLMAYDYAGSFSSLSGHQANVYNDTS 266
Query: 600 EPYPN-YNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEY 658
P +N TAL L G KIV+G+P YG+S+ G G +G G+
Sbjct: 267 NPLSTPFNTQTALDLYRAGGVPANKIVLGMPLYGRSFANT----DGPGKPYNGV---GQG 319
Query: 659 TQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYT 718
+ + G+ Y + T
Sbjct: 320 SWENGVWDYKALP----QAGATEHVL---------------------------------- 341
Query: 719 QQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGY 778
P ++A Y Y + +SY++P K +IKS G
Sbjct: 342 --PDIMASY--SYDATNKFL-------------------ISYDNPQVANLKSGYIKSLGL 378
Query: 779 AGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRLKDKKPS 819
G M W D + L+ V A G + S
Sbjct: 379 GGAMWWDSSSDKTGS------DSLITTVVNALGGTGVFEQS 413
Score = 240 bits (615), Expect = 2e-69
Identities = 78/324 (24%), Positives = 131/324 (40%), Gaps = 45/324 (13%)
Query: 1319 PPTEPTTTHISVTEKSPLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPWINILKL---YVT 1375
S ++ ++ V YF NWA Y + + +P + + +
Sbjct: 22 AAVMWNRDTSSTDLEARASSGYRSVVYFVNWAIYGR---NHNPQDLPVERLTHVLYAFAN 78
Query: 1376 LQTGLGT--------DQEKENTFLKISELTYVHILFYERVVTLKKK--GVKVSLAIGGWN 1425
++ G D EK S+ +++ LKK+ +KV L+IGGW
Sbjct: 79 VRPETGEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWT 138
Query: 1426 DSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKES 1485
S ++ ++ R+ F + VK L FDGLD+DWEYP D
Sbjct: 139 YS--PNFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYP---------ENDQQAND 187
Query: 1486 FGLFVRELHQAFKPHG--------LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYD 1537
F L ++E+ A + LL+ A I +K + + LD+ ++M YD
Sbjct: 188 FVLLLKEVRTALDSYSAANAGGQHFLLTVASPAGPDKIKV-LHLKDMDQQLDFWNLMAYD 246
Query: 1538 YHGQWDKKTGHVAPLYEHPDDDF-FYFNANFTMNYWMKKGAPSRKLVMGVHPLLS---TI 1593
Y G + +GH A +Y + FN ++ + G P+ K+V+G+ PL
Sbjct: 247 YAGSFSSLSGHQANVYNDTSNPLSTPFNTQTALDLYRAGGVPANKIVLGM-PLYGRSFAN 305
Query: 1594 TEVLGH---GPG-GNYESTTEEYK 1613
T+ G G G G++E+ +YK
Sbjct: 306 TDGPGKPYNGVGQGSWENGVWDYK 329
Score = 199 bits (507), Expect = 3e-55
Identities = 84/412 (20%), Positives = 151/412 (36%), Gaps = 76/412 (18%)
Query: 2 ENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP 61
S+ ++ V Y + Y N +++ + THV+YA+A + P + +
Sbjct: 32 STDLEARASSGYRSVVYFVNWAIYG---RNHNPQDLPVERLTHVLYAFANVRPETGEVYM 88
Query: 62 EDLEYDV---------------IKGGYKSFLGLKEANPELKVYLAV-----KSNFVSITS 101
D D+ + G K LK+ N LKV L++ NF S
Sbjct: 89 TDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWTYSPNFAPAAS 148
Query: 102 DRESRLNFISSVLEMFDMYKFDGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQE 158
R NF + +++ FDGLD+ D P ND+ +DF ++E
Sbjct: 149 TDAGRKNFAKTAVKLLQDLGFDGLDI---DWEYPE-NDQQ----------ANDFVLLLKE 194
Query: 159 LSSTL--------RRNNYQLTLTSPGVIDRKTSLVDISVVAPLVDLILLKSF----NNDH 206
+ + L ++ LT+ SP D K ++ + + +D L ++ +
Sbjct: 195 VRTALDSYSAANAGGQHFLLTVASPAGPD-KIKVLHLKDMDQQLDFWNLMAYDYAGSFSS 253
Query: 207 MDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFN 266
+ V +T + ++ N ++A+ + G +I++G+P +G+S+ +
Sbjct: 254 LSGHQANVYNDTS------NPLSTPFNTQTALDLYRAGGVPANKIVLGMPLYGRSFANTD 307
Query: 267 RSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGEPFMVK--KDEW 324
G G G G + + G + + H +
Sbjct: 308 ----GPGKPYNGVG---QGSWENGVWDYKALPQAGAT---EHVLPDIMASYSYDATNKFL 357
Query: 325 ITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNL 376
I+Y+N K YIK LGGAM W D L++ VV+ L
Sbjct: 358 ISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDKT-----GSDSLITTVVNAL 404
Score = 123 bits (311), Expect = 1e-29
Identities = 41/162 (25%), Positives = 79/162 (48%), Gaps = 24/162 (14%)
Query: 2175 SKQSNQQEQIRYAEPYKVICYYTSWA-YLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQE 2233
S+ + R + Y+ + Y+ +WA Y R ++P+D+ TH++YAFA++ +
Sbjct: 28 RDTSSTDLEARASSGYRSVVYFVNWAIYGR----NHNPQDLPVERLTHVLYAFANVRPET 83
Query: 2234 LVIRSHNNKLDLEQGF------------YEKITKFNE-----RGIQVILAIGGWSDSRSD 2276
+ ++ D+E+ + Y I + R ++V+L+IGGW+ S
Sbjct: 84 GEVYMTDSWADIEKHYPGDSWSDTGNNVYGCIKQLYLLKKQNRNLKVLLSIGGWTYS--P 141
Query: 2277 KYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYPKCWQ 2318
++ + R+NF + + L+ GF+GL+ WEYP+ Q
Sbjct: 142 NFAPAASTDAGRKNFAKTAVKLLQDLGFDGLDIDWEYPENDQ 183
Score = 82.8 bits (205), Expect = 3e-16
Identities = 23/80 (28%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 2328 WTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNL 2385
T Y+Y+ K +SYD+ + K IK GLGGAM W D
Sbjct: 336 ATEHVLP-DIMASYSYDATNKFLISYDNPQVANLKSGYIKSLGLGGAMWWDSSSDK---- 390
Query: 2386 CSCGPYPLLSAVNYELRNTT 2405
G L++ V L T
Sbjct: 391 --TGSDSLITTVVNALGGTG 408
Score = 40.8 bits (96), Expect = 0.005
Identities = 8/24 (33%), Positives = 10/24 (41%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHN 894
+IKS G G M W D +
Sbjct: 370 SGYIKSLGLGGAMWWDSSSDKTGS 393
>1itx_A Chitinase A1, glycosyl hydrolase; alpha-beta (TIM) barrel; 1.10A
{Bacillus circulans} SCOP: c.1.8.5 d.26.3.1
Length = 419
Score = 405 bits (1042), Expect = e-127
Identities = 105/436 (24%), Positives = 176/436 (40%), Gaps = 76/436 (17%)
Query: 1700 KPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLV--- 1756
+P + +KIV Y+ +WA Y Y +DID TH+ Y FA + + +
Sbjct: 2 QPATAEAADS-YKIVGYYPSWAAYG---RNYNVADIDPTKVTHINYAFADICWNGIHGNP 57
Query: 1757 --------------------------IKPHDTWADLDNKF------------YEKVTALK 1778
I D W D F ++ LK
Sbjct: 58 DPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLK 117
Query: 1779 KK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPK 1836
+ +K +++GGW S ++S + + R F V+F+ ++NFDG+DLDWEYP
Sbjct: 118 QTNPNLKTIISVGGWTWSN--RFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPV 175
Query: 1837 CWQVDCKQGPASDKQGFADLIKELRAAFNPH------DLLLSAAVSPSKAVIDNAYDIPV 1890
+D DKQ + L+ ++R + LL+ A + A ++
Sbjct: 176 SGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIAS-GASATYAANTELAK 234
Query: 1891 MSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPT------FNANYSLHYWVSHGA 1944
++ +DWI++MTYD++G W K + H AP+ P + FN + G
Sbjct: 235 IAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGV 294
Query: 1945 DRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDK-IQKDG 2003
K++ G+P YG+ + + NG GG+ G T G +Y++ I K+G
Sbjct: 295 PAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG--TWEAGSFDFYDLEANYINKNG 352
Query: 2004 WVVVRDRKRRIGPYAFKGD--QWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNF 2061
+ + + PY + +++ +DD + +K ++K LGGAM W L D K
Sbjct: 353 YTRYWNDTAK-VPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKT- 410
Query: 2062 CGCESYPLLKTINRVL 2077
L + L
Sbjct: 411 -------LQNKLKADL 419
Score = 291 bits (746), Expect = 2e-87
Identities = 102/493 (20%), Positives = 177/493 (35%), Gaps = 134/493 (27%)
Query: 376 LQPEEPEP----KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPN------ 425
LQP E K+V Y +W+ + +ID THI YAFA + N
Sbjct: 1 LQPATAEAADSYKIVGYYPSWAAYG---RNYNVADIDPTKVTHINYAFADICWNGIHGNP 57
Query: 426 -----------------------TLSIQAGNPEADIDDNFYQRISSSPLV---------- 452
+I G+P D F P+
Sbjct: 58 DPSGPNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLK 117
Query: 453 -THGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYPV 511
T+ +K +I++GGWT S+ ++S + ++ + R+ F S + FLR+++F G+ DW YPV
Sbjct: 118 QTNPNLKTIISVGGWTWSN--RFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPV 175
Query: 512 CWQADCSKQHKADKGNFVKLIQELKAEFDKHDY--------SIAVGISGYKEILEVAYDF 563
D + + DK N+ L+ +++ + D +IA G S +
Sbjct: 176 SGGLDGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASATY---AANTEL 232
Query: 564 PALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPN------YNINTALKLIDEL 617
+ V+++++M+YD++GAW+ I+ +PLN P +N+ + +
Sbjct: 233 AKIAAIVDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDA 292
Query: 618 GGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTR 677
G K+V+GVPFYG+ + +G G + T + G +Y++ +
Sbjct: 293 GVPAAKLVLGVPFYGRGWDGCAQAGNGQYQTCTGG--SSVGTWEAGSFDFYDLEANYINK 350
Query: 678 K-WTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTR 736
+T N + P Y Y +
Sbjct: 351 NGYTRYWNDTAKVP--------------------------Y------------LYNASNK 372
Query: 737 KWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCC 796
++ +SY+D S+ K +IKS G G M W + D
Sbjct: 373 RF-------------------ISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKT--- 410
Query: 797 MESFPLLRAVNRA 809
L +
Sbjct: 411 -----LQNKLKAD 418
Score = 245 bits (628), Expect = 2e-71
Identities = 75/346 (21%), Positives = 128/346 (36%), Gaps = 74/346 (21%)
Query: 1333 KSPLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPW----------INILKLYVTLQTGLGT 1382
+ +KIV Y+ +WA Y Y + + +I +
Sbjct: 5 TAEAADSYKIVGYYPSWAAYGR---NYNVADIDPTKVTHINYAFADICWNGIHGNPDPSG 61
Query: 1383 DQEKENTFLKISELTYVHILF---------------------------YERVVTLKKK-- 1413
T T ++ LK+
Sbjct: 62 PNPVTWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNP 121
Query: 1414 GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQV 1473
+K +++GGW S ++S + +A R+ F V FL KY FDG+DLDWEYP +
Sbjct: 122 NLKTIISVGGWTWS--NRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSGGL 179
Query: 1474 NCDAGPDSDKESFGLFVRELHQAFKPHG------LLLSAAVSPSKQVINAAYDVKALSES 1527
+ ++ DK+++ L + ++ + G LL+ A + A ++ ++
Sbjct: 180 DGNSKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIAS-GASATYAANTELAKIAAI 238
Query: 1528 LDWISVMTYDYHGQWDKKTGHVAPLYEHPDD------DFFYFNANFTMNYWMKKGAPSRK 1581
+DWI++MTYD++G W K + H APL P D FN + G P+ K
Sbjct: 239 VDWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTFNVAAGAQGHLDAGVPAAK 298
Query: 1582 LVMGV--------------HPLLSTITEVLGHGPGGNYESTTEEYK 1613
LV+GV + T T G G +E+ + ++
Sbjct: 299 LVLGVPFYGRGWDGCAQAGNGQYQTCT---GGSSVGTWEAGSFDFY 341
Score = 200 bits (510), Expect = 9e-56
Identities = 79/430 (18%), Positives = 161/430 (37%), Gaps = 82/430 (19%)
Query: 10 STKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALI--------- 60
+ +++V Y + +AY +NV ++ P TH+ YA+A I
Sbjct: 9 ADSYKIVGYYPSWAAYGRN---YNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPV 65
Query: 61 --------------------------------PEDLEYDVIKGGYKSFLGLKEANPELKV 88
D I G LK+ NP LK
Sbjct: 66 TWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKT 125
Query: 89 YLAV-----KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKD---PALNDEDDD 140
++V + F + + +R F +S ++ Y FDG+DL D P D +
Sbjct: 126 IISVGGWTWSNRFSDVAATAATREVFANSAVDFLRKYNFDGVDL---DWEYPVSGGLDGN 182
Query: 141 DLESIANERSDFSTFIQELSSTLRR------NNYQLTLTSPGVIDRKTSLVDISVVAPLV 194
++ +++ + ++ L Y LT+ S + +++ +A +V
Sbjct: 183 --SKRPEDKQNYTLLLSKIREKLDAAGAVDGKKYLLTIASGASAT-YAANTELAKIAAIV 239
Query: 195 DLILLKSF----NNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQ 250
D I + ++ + P+ + + F N+ + + G +
Sbjct: 240 DWINIMTYDFNGAWQKISAHNAPLNYDPAASAAGVPDANTF-NVAAGAQGHLDAGVPAAK 298
Query: 251 IIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKT-WRHF 309
+++G+PF+G+ + ++ G T G + G T G F+++ + +K + +
Sbjct: 299 LVLGVPFYGRGWDGCAQAGNGQYQTCTGGSSVG--TWEAGSFDFYDLEANYINKNGYTRY 356
Query: 310 TDSNGE-PFMVK--KDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKY 366
+ + P++ +I+Y++ +S+ K YIK + LGGAM W L D +
Sbjct: 357 WNDTAKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWELSGDRNKT------ 410
Query: 367 PLLSAVVSNL 376
L + + ++L
Sbjct: 411 -LQNKLKADL 419
Score = 109 bits (275), Expect = 4e-25
Identities = 41/174 (23%), Positives = 68/174 (39%), Gaps = 48/174 (27%)
Query: 2187 AEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELV----------- 2235
A+ YK++ YY SWA Y+ DID + TH+ YAFAD+ +
Sbjct: 9 ADSYKIVGYYPSWA---AYGRNYNVADIDPTKVTHINYAFADICWNGIHGNPDPSGPNPV 65
Query: 2236 ------------------IRSHNNKLDLEQGF---------YEKITKFNE-----RGIQV 2263
I + +D + F I + N+ ++
Sbjct: 66 TWTCQNEKSQTINVPNGTIVLGDPWIDTGKTFAGDTWDQPIAGNINQLNKLKQTNPNLKT 125
Query: 2264 ILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYPKCW 2317
I+++GGW+ S+++S + R F +FL Y F+G++ WEYP
Sbjct: 126 IISVGGWTW--SNRFSDVAATAATREVFANSAVDFLRKYNFDGVDLDWEYPVSG 177
Score = 81.3 bits (201), Expect = 9e-16
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 3/70 (4%)
Query: 2320 CSTVKSHEWTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSI 2377
+ + + +T + A+ PY YN K ++SYDD + K IK GLGGAM W +
Sbjct: 345 ANYINKNGYTRYWNDT-AKVPYLYNASNKRFISYDDAESVGYKTAYIKSKGLGGAMFWEL 403
Query: 2378 DLDDFQNLCS 2387
D + L +
Sbjct: 404 SGDRNKTLQN 413
Score = 41.2 bits (97), Expect = 0.004
Identities = 8/26 (30%), Positives = 10/26 (38%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKC 896
+IKS G G M W + D
Sbjct: 387 TAYIKSKGLGGAMFWELSGDRNKTLQ 412
>1edq_A Chitinase A; beta-alpha (TIM) barrel, hydrolase; 1.55A {Serratia
marcescens} SCOP: b.1.18.2 c.1.8.5 d.26.3.1 PDB: 1ffq_A*
1ffr_A* 1ehn_A* 1ctn_A 1k9t_A* 1eib_A* 2wlz_A* 2wly_A*
2wm0_A* 2wk2_A* 1nh6_A* 1x6l_A 1rd6_A 1x6n_A*
Length = 540
Score = 408 bits (1051), Expect = e-126
Identities = 106/491 (21%), Positives = 177/491 (36%), Gaps = 70/491 (14%)
Query: 1643 TTTTTSTTTTTKRPKPPTTTSTTTTR-PKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP 1701
+T +S T K K T V + + P + K
Sbjct: 67 PSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIVVADTDGSHLAPLKEPLLEKN 126
Query: 1702 VIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLV----- 1756
+ YF W Y G + I + TH++YGF + +
Sbjct: 127 KPYKQNSG-KVVGSYFVEWGVY---GRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLK 182
Query: 1757 --------------------IKPHDTWADLDNKF-------------YEKVTALKKK--G 1781
+ HD +A L + ++ ALK+
Sbjct: 183 EIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPD 242
Query: 1782 VKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHN-FDGLDLDWEYPKCWQV 1840
+K+ +IGGW S + + + R +F+ V F+ FDG+D+DWE+P
Sbjct: 243 LKILPSIGGWTLS-DPFFF--MGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGKGA 299
Query: 1841 DCKQGPASDKQGFADLIKELRAAFNPH------DLLLSAAVSPSKAVIDNAYDIPVMSEN 1894
+ G D + + L+KELRA + L++A+S K ID V +
Sbjct: 300 NPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDK-VAYNVAQNS 358
Query: 1895 LDWISVMTYDYHGQWD-KKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKVIFGM 1953
+D I +M+YD++G +D K GH + A + ++ ++ G K++ G
Sbjct: 359 MDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGVKPGKIVVGT 418
Query: 1954 PMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRDRKRR 2013
MYG+ +T + +N + T + T G + Y +I + W D
Sbjct: 419 AMYGRGWTGVNGYQNNIP-FTGTATGPVKGTWENGIVDYRQIAGQFMSGEWQYTYDATAE 477
Query: 2014 IGPYAFKGD--QWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLK 2071
PY FK + FDD + K ++V LGG W +D D+ +L
Sbjct: 478 -APYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEIDADNG---------DILN 527
Query: 2072 TINRVLRNYPG 2082
++N L N G
Sbjct: 528 SMNASLGNSAG 538
Score = 281 bits (721), Expect = 2e-82
Identities = 88/492 (17%), Positives = 166/492 (33%), Gaps = 121/492 (24%)
Query: 367 PLLSAVVSNLQPEEPEP--KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDP 424
PL ++ +P + V Y W F + I + TH++Y F +
Sbjct: 117 PLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYG---RNFTVDKIPAQNLTHLLYGFIPICG 173
Query: 425 NTLSIQAGN-------------------------PEADIDDNFYQRISSSPLVT------ 453
+ P A + +
Sbjct: 174 GNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQL 233
Query: 454 ------HGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFD-FAGLHFD 506
H +KIL +IGGWT S + R +F+ SV FL+ + F G+ D
Sbjct: 234 MALKQAHPDLKILPSIGGWTLSD---PFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDID 290
Query: 507 WNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKH------DYSIAVGISGYKEILEVA 560
W +P A+ + D +V L++EL+A D+ Y + IS K+ ++
Sbjct: 291 WEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKID-K 349
Query: 561 YDFPALNDHVEFMSLMSYDYHGAWEG-ITGLVSPLNSRPGEPYPNYNINTALKLIDELGG 619
+ + ++ + LMSYD++GA++ G + LN+ +P Y + + G
Sbjct: 350 VAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVNGVNALLAQGV 409
Query: 620 DKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKW 679
KIV+G YG+ +T ++ + G + T + G++ Y +I + + +W
Sbjct: 410 KPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATG-PVKGTWENGIVDYRQIAGQFMSGEW 468
Query: 680 TVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWT 739
+ + P Y ++ T
Sbjct: 469 QYTYDATAEAP--------------------------Y------------VFKPSTGDL- 489
Query: 740 VQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMES 799
++++D S+ K K++ G+ +W ID D+
Sbjct: 490 ------------------ITFDDARSVQAKGKYVLDKQLGGLFSWEIDADN--------- 522
Query: 800 FPLLRAVNRAFG 811
+L ++N + G
Sbjct: 523 GDILNSMNASLG 534
Score = 238 bits (608), Expect = 2e-67
Identities = 72/379 (18%), Positives = 125/379 (32%), Gaps = 56/379 (14%)
Query: 1257 TSATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWV 1316
T T+ +V K+ ++ T + + G + TE V
Sbjct: 47 NGDTGTTAKVLLNGKEAWSGPSTGSSGTANFKVNKGGRYQMQVALCNADGCTASDATEIV 106
Query: 1317 WHP----PTEPTTTHISVTEKS-PLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPW----- 1366
P + K + + YF W Y + + K+P
Sbjct: 107 VADTDGSHLAPLKEPLLEKNKPYKQNSGKVVGSYFVEWGVYG---RNFTVDKIPAQNLTH 163
Query: 1367 -------INILKLYVTLQTGLGTDQEKENTFLKISELTYVHIL----------------- 1402
I + + + E V I
Sbjct: 164 LLYGFIPICGGNGINDSLKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWD 223
Query: 1403 -----FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLK 1455
+ +++ LK+ +K+ +IGGW S + R RF+ V +FL
Sbjct: 224 DPYKGNFGQLMALKQAHPDLKILPSIGGWTLS---DPFFFMGDKVKRDRFVGSVKEFLQT 280
Query: 1456 Y-QFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG------LLLSAAV 1508
+ FDG+D+DWE+P N + G D E++ L ++EL L++A+
Sbjct: 281 WKFFDGVDIDWEFPGGKGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAI 340
Query: 1509 SPSKQVINAAYDVKALSESLDWISVMTYDYHGQWD-KKTGHVAPLYEHPDDDFFYFNANF 1567
S K I+ S+D I +M+YD++G +D K GH L +
Sbjct: 341 SAGKDKID-KVAYNVAQNSMDHIFLMSYDFYGAFDLKNLGHQTALNAPAWKPDTAYTTVN 399
Query: 1568 TMNYWMKKGAPSRKLVMGV 1586
+N + +G K+V+G
Sbjct: 400 GVNALLAQGVKPGKIVVGT 418
Score = 191 bits (488), Expect = 9e-52
Identities = 83/442 (18%), Positives = 158/442 (35%), Gaps = 99/442 (22%)
Query: 2 ENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP 61
E + Q++ V Y Y F V + Q TH++Y + I +
Sbjct: 124 EKNKPYKQNSGKVVGSYFVEWGVYG---RNFTVDKIPAQNLTHLLYGFIPICGGNGINDS 180
Query: 62 E-----------------------------DLEY---------DVIKGGYKSFLGLKEAN 83
L+ D KG + + LK+A+
Sbjct: 181 LKEIEGSFQALQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAH 240
Query: 84 PELKVYLAV----KSNFVSITSDRESRLNFISSVLEMFDMYK-FDGLDLNVKD---PALN 135
P+LK+ ++ S+ D+ R F+ SV E +K FDG+D+ D P
Sbjct: 241 PDLKILPSIGGWTLSDPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDI---DWEFPGGK 297
Query: 136 DEDDDDLESIANERSDFSTFIQELSSTLRRN------NYQLTLTSPGVIDRKTSLVDISV 189
+ + + + ++EL + L + Y+LT D K V +V
Sbjct: 298 GANPN--LGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKD-KIDKVAYNV 354
Query: 190 VAPLVDLILLKSFNNDHM--------DDEVV----PVKPNTKVNIQVTSTIANFNNIESA 237
+D I L M D + + + +
Sbjct: 355 AQNSMDHIFL-------MSYDFYGAFDLKNLGHQTALNAPA-------WKPDTAYTTVNG 400
Query: 238 VYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEV 297
V + +G +P +I++G +G+ + N + + T G K T G + + ++
Sbjct: 401 VNALLAQGVKPGKIVVGTAMYGRGWTGVNGYQNNIPFTGTATGP-VKGTWENGIVDYRQI 459
Query: 298 CNKFKDKTWRHFTDSNGE-PFMVKKD--EWITYENNDSIRRKMNYIKDRHLGGAMLWTLD 354
+F W++ D+ E P++ K + IT+++ S++ K Y+ D+ LGG W +D
Sbjct: 460 AGQFMSGEWQYTYDATAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQLGGLFSWEID 519
Query: 355 LDDFRGFCGQKYPLLSAVVSNL 376
D+ +L+++ ++L
Sbjct: 520 ADNG--------DILNSMNASL 533
Score = 96.4 bits (240), Expect = 3e-20
Identities = 31/170 (18%), Positives = 55/170 (32%), Gaps = 47/170 (27%)
Query: 2189 PYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKL----- 2243
V Y+ W ++ + I THL+Y F + + S
Sbjct: 134 GKVVGSYFVEWG---VYGRNFTVDKIPAQNLTHLLYGFIPICGGNGINDSLKEIEGSFQA 190
Query: 2244 ---------------------------------DLEQGFYEKIT--KFNERGIQVILAIG 2268
D +G + ++ K ++++ +IG
Sbjct: 191 LQRSCQGREDFKVSIHDPFAALQKAQKGVTAWDDPYKGNFGQLMALKQAHPDLKILPSIG 250
Query: 2269 GWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYG-FNGLEFAWEYPKCW 2317
GW+ S + D R FV V EFL+ + F+G++ WE+P
Sbjct: 251 GWTLS---DPFFFMGDKVKRDRFVGSVKEFLQTWKFFDGVDIDWEFPGGK 297
Score = 83.7 bits (207), Expect = 3e-16
Identities = 25/96 (26%), Positives = 40/96 (41%), Gaps = 15/96 (15%)
Query: 2311 WEYPKCWQTCSTVKSHEWTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDG 2368
+Y Q S EW D+ A PY + +++DD R ++ K K +
Sbjct: 454 VDY---RQIAGQFMSGEWQYTYDA-TAEAPYVFKPSTGDLITFDDARSVQAKGKYVLDKQ 509
Query: 2369 LGGAMVWSIDLDDFQNLCSCGPYPLLSAVNYELRNT 2404
LGG W ID D+ +L+++N L N+
Sbjct: 510 LGGLFSWEIDADNG---------DILNSMNASLGNS 536
Score = 39.8 bits (93), Expect = 0.010
Identities = 6/22 (27%), Positives = 11/22 (50%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDF 892
K++ G+ +W ID D+
Sbjct: 502 GKYVLDKQLGGLFSWEIDADNG 523
>1ll7_A Chitinase 1; beta-alpha barrel, hydrolase; 2.00A {Coccidioides
immitis} SCOP: c.1.8.5 d.26.3.1 PDB: 1d2k_A 1ll4_A*
1ll6_A
Length = 392
Score = 399 bits (1028), Expect = e-125
Identities = 98/411 (23%), Positives = 172/411 (41%), Gaps = 64/411 (15%)
Query: 1711 FKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
F+ V YF NWA Y + + P D+ +D TH++Y FA + V DTWAD D +
Sbjct: 3 FRSVVYFVNWAIYGR---GHNPQDLKADQFTHILYAFANIRPSGEV-YLSDTWADTDKHY 58
Query: 1771 ---------------YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFI 1813
+++ LKK +K L+IGGW S + ++++ R KF
Sbjct: 59 PGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSP--NFKTPASTEEGRKKFA 116
Query: 1814 AHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPH------ 1867
+ + + FDG+D+DW+YP F L+K R A + +
Sbjct: 117 DTSLKLMKDLGFDGIDIDWQYP---------EDEKQANDFVLLLKACREALDAYSAKHPN 167
Query: 1868 --DLLLSAAVSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPND 1925
LL+ A + + M + LD+ ++M YD+ G WDK +GH++ ++
Sbjct: 168 GKKFLLTIASPAGPQNYNK-LKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTK 226
Query: 1926 TTPT-FNANYSLHYWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENT 1984
T F+++ ++ ++ G K++ GMP+YG++F + +G+ ++ G G +
Sbjct: 227 PESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFA----STDGIG-TSFNG--VGGGS 279
Query: 1985 RARGFLAYYEICDKIQKDGWVVVRDRKRRIGPYAFKGDQ--WVGFDDQAMIHHKAEFVKY 2042
G Y ++ + G V Y++ ++ + +D + KAE++
Sbjct: 280 WENGVWDYKDMPQQ----GAQVTELEDIA-ASYSYDKNKRYLISYDTVKIAGKKAEYITK 334
Query: 2043 NDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVLRNYPG--PGPNCFLKP 2091
N +GG M W D N L+ T+ L N P
Sbjct: 335 NGMGGGMWWESSSDKTGN------ESLVGTVVNGLGGTGKLEQRENELSYP 379
Score = 288 bits (738), Expect = 2e-86
Identities = 89/453 (19%), Positives = 163/453 (35%), Gaps = 117/453 (25%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
+ V Y NW+ + P+++ THI+YAFA++ P+ + + AD D ++
Sbjct: 4 RSVVYFVNWAIYGR---GHNPQDLKADQFTHILYAFANIRPSG-EVYLSDTWADTDKHYP 59
Query: 444 QRISSSPLVT--------------HGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIK 489
P + +K L++IGGWT S + S+ RKKF
Sbjct: 60 GDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYS--PNFKTPASTEEGRKKFAD 117
Query: 490 SVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY----- 544
+ L ++ F G+ DW YP + + +FV L++ + D +
Sbjct: 118 TSLKLMKDLGFDGIDIDWQYP---------EDEKQANDFVLLLKACREALDAYSAKHPNG 168
Query: 545 -----SIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPG 599
+IA +G + ++ +++F +LM+YD+ G+W+ ++G +S +
Sbjct: 169 KKFLLTIASP-AGPQNY--NKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTT 225
Query: 600 EPYPN-YNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEY 658
+P ++ + A+K + G KIV+G+P YG+++ G+G +G G
Sbjct: 226 KPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFAST----DGIGTSFNGV---GGG 278
Query: 659 TQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYT 718
+ + G+ Y ++ + V
Sbjct: 279 SWENGVWDYKDMP----QQGAQVTEL---------------------------------- 300
Query: 719 QQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGY 778
+ A Y Y R +SY+ +K ++I NG
Sbjct: 301 --EDIAASY--SYDKNKRYL-------------------ISYDTVKIAGKKAEYITKNGM 337
Query: 779 AGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFG 811
G M W D N L+ V G
Sbjct: 338 GGGMWWESSSDKTGN------ESLVGTVVNGLG 364
Score = 237 bits (608), Expect = 5e-69
Identities = 72/302 (23%), Positives = 130/302 (43%), Gaps = 44/302 (14%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKVP----------WINILKLYVTLQTGLGTDQEKENT 1389
F+ V YF NWA Y G + + + + NI + D +K
Sbjct: 3 FRSVVYFVNWAIYGRG---HNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYP 59
Query: 1390 FLKISELTYVHILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIE 1447
K E +++ LKK +K L+IGGW S + ++ R++F +
Sbjct: 60 GDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYS--PNFKTPASTEEGRKKFAD 117
Query: 1448 HVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG------ 1501
+K + FDG+D+DW+YP + F L ++ +A +
Sbjct: 118 TSLKLMKDLGFDGIDIDWQYP---------EDEKQANDFVLLLKACREALDAYSAKHPNG 168
Query: 1502 --LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDD- 1558
LL+ A Q N + + + LD+ ++M YD+ G WDK +GH++ ++
Sbjct: 169 KKFLLTIASPAGPQNYNK-LKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTTKP 227
Query: 1559 DFFYFNANFTMNYWMKKGAPSRKLVMGVHPLLS---TITEVLGH---GPG-GNYESTTEE 1611
+ F+++ + ++K G P+ K+V+G+ PL T+ +G G G G++E+ +
Sbjct: 228 ESTPFSSDKAVKDYIKAGVPANKIVLGM-PLYGRAFASTDGIGTSFNGVGGGSWENGVWD 286
Query: 1612 YK 1613
YK
Sbjct: 287 YK 288
Score = 192 bits (491), Expect = 2e-53
Identities = 75/399 (18%), Positives = 145/399 (36%), Gaps = 75/399 (18%)
Query: 14 QVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALI------------- 60
+ V Y + Y N +++ TH++YA+A I P +
Sbjct: 4 RSVVYFVNWAIYG---RGHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHYPG 60
Query: 61 -PEDLEYDVIKGGYKSFLGLKEANPELKVYLAV-----KSNFVSITSDRESRLNFISSVL 114
D + + G K LK+ N LK L++ NF + S E R F + L
Sbjct: 61 DKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYSPNFKTPASTEEGRKKFADTSL 120
Query: 115 EMFDMYKFDGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTL-------- 163
++ FDG+D+ D P +++ +DF ++ L
Sbjct: 121 KLMKDLGFDGIDI---DWQYPE-DEKQ----------ANDFVLLLKACREALDAYSAKHP 166
Query: 164 RRNNYQLTLTSPGVIDRKTSLVDISVVAPLVDLILLKSF----NNDHMDDEVVPVKPNTK 219
+ LT+ SP + + ++ + +D L ++ + D + + V P+T
Sbjct: 167 NGKKFLLTIASPAGPQ-NYNKLKLAEMDKYLDFWNLMAYDFSGSWDKVSGHMSNVFPSTT 225
Query: 220 VNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGP 279
+ + + AV ++IK G +I++G+P +G+++ + G+G + G
Sbjct: 226 ------KPESTPFSSDKAVKDYIKAGVPANKIVLGMPLYGRAFASTD----GIGTSFNGV 275
Query: 280 GTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGEPFMVKKD--EWITYENNDSIRRKM 337
G + G + ++ + + + K+ I+Y+ +K
Sbjct: 276 G---GGSWENGVWDYKDMPQQ---GAQVTELEDIAASYSYDKNKRYLISYDTVKIAGKKA 329
Query: 338 NYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNL 376
YI +GG M W D L+ VV+ L
Sbjct: 330 EYITKNGMGGGMWWESSSDKTGN-----ESLVGTVVNGL 363
Score = 115 bits (290), Expect = 3e-27
Identities = 32/143 (22%), Positives = 66/143 (46%), Gaps = 23/143 (16%)
Query: 2190 YKVICYYTSWA-YLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVI------------ 2236
++ + Y+ +WA Y R ++P+D+ TH++YAFA++ V
Sbjct: 3 FRSVVYFVNWAIYGR----GHNPQDLKADQFTHILYAFANIRPSGEVYLSDTWADTDKHY 58
Query: 2237 --RSHNNKLDLEQGFYEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFV 2292
+ + G +++ K N R ++ +L+IGGW+ S + + R+ F
Sbjct: 59 PGDKWDEPGNNVYGCIKQMYLLKKNNRNLKTLLSIGGWTYS--PNFKTPASTEEGRKKFA 116
Query: 2293 RHVTEFLEFYGFNGLEFAWEYPK 2315
+ ++ GF+G++ W+YP+
Sbjct: 117 DTSLKLMKDLGFDGIDIDWQYPE 139
Score = 83.5 bits (207), Expect = 1e-16
Identities = 19/80 (23%), Positives = 30/80 (37%), Gaps = 9/80 (11%)
Query: 2328 WTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNL 2385
V Y+Y+ + +SYD + +K + I ++G+GG M W D
Sbjct: 295 AQVTELE-DIAASYSYDKNKRYLISYDTVKIAGKKAEYITKNGMGGGMWWESSSDKT--- 350
Query: 2386 CSCGPYPLLSAVNYELRNTT 2405
G L+ V L T
Sbjct: 351 ---GNESLVGTVVNGLGGTG 367
Score = 42.6 bits (101), Expect = 0.001
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNK 895
++I NG G M W D N+
Sbjct: 329 AEYITKNGMGGGMWWESSSDKTGNE 353
>3g6m_A Chitinase, crchi1; inhibitor, caffeine, glycosidase, hydrolas
hydrolase inhibitor complex; HET: CFF; 1.65A {Bionectria
ochroleuca} PDB: 3g6l_A*
Length = 406
Score = 399 bits (1028), Expect = e-125
Identities = 99/429 (23%), Positives = 168/429 (39%), Gaps = 63/429 (14%)
Query: 1691 KPKPTTVKPKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVL 1750
+ P + YFTNW Y + P+D+ + HV+Y F L
Sbjct: 1 RATPRMEDLASTDLSTRATGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNL 57
Query: 1751 DTDQLVIKPHDTWADLDNKF---------------YEKVTALKKK--GVKVTLAIGGWND 1793
D V DT+ADL+ + +++ LKK +K+ L+IGGW
Sbjct: 58 RVDGTV-YSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTW 116
Query: 1794 SAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGF 1853
S + +++ R+ F V F+ + FDG+D+DWEYP +D
Sbjct: 117 ST--NFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYP---------ASETDANNM 165
Query: 1854 ADLIKELRAAFNPHD--------LLLSAAVSPSKAVIDNAYDIPVMSENLDWISVMTYDY 1905
L++ +R + + LS A + + + + LD I++M YDY
Sbjct: 166 VLLLQRVRQELDSYSATYANGYHFQLSIAAPAGPSHYN-VLKLAQLGSVLDNINLMAYDY 224
Query: 1906 HGQWDKKTGHVAPMYALPNDTTPT-FNANYSLHYWVSHGADRKKVIFGMPMYGQSFTLAD 1964
G WD +GH +Y ++ + T F+ ++ +++ G K+I GMP+YG++F
Sbjct: 225 AGSWDSVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGT- 283
Query: 1965 KNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRDRKRRIGPYAF--KGD 2022
+G + Y GE + G Y + G V+ D Y++
Sbjct: 284 ---DGPG-KPYST--IGEGSWESGIWDYKVLPKA----GATVITDSAAG-ATYSYDSSSR 332
Query: 2023 QWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVLRNYPG 2082
+ +D M+ K + K LGG+M W D + L+ T + ++
Sbjct: 333 TMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKTGS------DSLIGTALSSMGSHDS 386
Query: 2083 PGPNCFLKP 2091
NC P
Sbjct: 387 -TQNCLSYP 394
Score = 284 bits (729), Expect = 3e-85
Identities = 87/469 (18%), Positives = 159/469 (33%), Gaps = 117/469 (24%)
Query: 370 SAVVSNLQPEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSI 429
++L Y TNW F P ++ H++Y+F +L + ++
Sbjct: 8 DLASTDLSTRATGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVDG-TV 63
Query: 430 QAGNPEADIDDNFYQRISSSPLVT--------------HGKVKILIAIGGWTDSSGEKYS 475
+G+ AD++ ++ + + +KI+++IGGWT S +
Sbjct: 64 YSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWS--TNFP 121
Query: 476 QLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQEL 535
S+ + R F K+ + F++ + F G+ DW YP + D N V L+Q +
Sbjct: 122 AAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYP---------ASETDANNMVLLLQRV 172
Query: 536 KAEFDKHDY----------SIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWE 585
+ E D + SIA +G L ++ ++LM+YDY G+W+
Sbjct: 173 RQELDSYSATYANGYHFQLSIAAP-AGPSHY--NVLKLAQLGSVLDNINLMAYDYAGSWD 229
Query: 586 GITGLVSPLNSRPGEPYPN-YNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHG 644
++G + L P ++ A+ G KI++G+P YG+++ G
Sbjct: 230 SVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGT----DG 285
Query: 645 LGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGL 704
G GE + + G+ Y + TV ++ +
Sbjct: 286 PGK---PYSTIGEGSWESGIWDYKVLP----KAGATVITDSAAGAT-------------- 324
Query: 705 GAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPT 764
Y Y +R +SY+ P
Sbjct: 325 ------------Y------------SYDSSSRTM-------------------ISYDTPD 341
Query: 765 SLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRL 813
+ KV + K G G M W D + L+ + G
Sbjct: 342 MVRTKVSYAKGLGLGGSMFWEASADKTGS------DSLIGTALSSMGSH 384
Score = 237 bits (607), Expect = 9e-69
Identities = 73/319 (22%), Positives = 125/319 (39%), Gaps = 44/319 (13%)
Query: 1323 PTTTHISVTEKSPLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPWINI-------LKLYVT 1375
P ++ T+ S YFTNW Y + + I + L V
Sbjct: 4 PRMEDLASTDLSTRATGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVD 60
Query: 1376 LQTGLG---TDQEKENTFLKISELTYVHILFYERVVTLKKK--GVKVSLAIGGWNDSLGG 1430
G D EK + +++ +++ LKK +K+ L+IGGW S
Sbjct: 61 GTVYSGDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWS--T 118
Query: 1431 KYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFV 1490
+ ++ R F + V+F+ + FDG+D+DWEYP ++D + L +
Sbjct: 119 NFPAAASTEATRATFAKTAVEFMKDWGFDGIDVDWEYP---------ASETDANNMVLLL 169
Query: 1491 RELHQAFKPHG--------LLLSAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQW 1542
+ + Q + LS A N + L LD I++M YDY G W
Sbjct: 170 QRVRQELDSYSATYANGYHFQLSIAAPAGPSHYNV-LKLAQLGSVLDNINLMAYDYAGSW 228
Query: 1543 DKKTGHVAPLYEHPDDDF-FYFNANFTMNYWMKKGAPSRKLVMGVHPLLS---TITEVLG 1598
D +GH LY + F+ ++ ++ G P+ K+++G+ P+ T+ G
Sbjct: 229 DSVSGHQTNLYPSTSNPSSTPFSTKAAVDAYIAAGVPASKIILGM-PIYGRAFVGTDGPG 287
Query: 1599 HGPGG----NYESTTEEYK 1613
++ES +YK
Sbjct: 288 KPYSTIGEGSWESGIWDYK 306
Score = 193 bits (492), Expect = 2e-53
Identities = 75/413 (18%), Positives = 154/413 (37%), Gaps = 77/413 (18%)
Query: 1 MENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALI 60
+ +T +++T Y Y F ++ HV+Y++ +
Sbjct: 9 LASTDLSTRATGSINAVYFTNWGIYG---RNFQPADLQASKILHVLYSFMNLRVDGTVYS 65
Query: 61 -----------PEDLEYDV---IKGGYKSFLGLKEANPELKVYLAV-----KSNFVSITS 101
+D D+ G K LK+AN LK+ L++ +NF + S
Sbjct: 66 GDTYADLEKHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWSTNFPAAAS 125
Query: 102 DRESRLNFISSVLEMFDMYKFDGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQE 158
+R F + +E + FDG+D+ D PA ++ D ++ +Q
Sbjct: 126 TEATRATFAKTAVEFMKDWGFDGIDV---DWEYPA-SETD----------ANNMVLLLQR 171
Query: 159 LSSTL--------RRNNYQLTLTSPGVIDRKTSLVDISVVAPLVDLILLKSF----NNDH 206
+ L ++QL++ +P +++ ++ + ++D I L ++ + D
Sbjct: 172 VRQELDSYSATYANGYHFQLSIAAPAGPS-HYNVLKLAQLGSVLDNINLMAYDYAGSWDS 230
Query: 207 MDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFN 266
+ + P+T + + + ++AV +I G +II+G+P +G+++ +
Sbjct: 231 VSGHQTNLYPSTS------NPSSTPFSTKAAVDAYIAAGVPASKIILGMPIYGRAFVGTD 284
Query: 267 RSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGE-PFMV--KKDE 323
G G G + + G + + TDS +
Sbjct: 285 ----GPGKPYSTIG---EGSWESGIWDYKVLPKAG----ATVITDSAAGATYSYDSSSRT 333
Query: 324 WITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNL 376
I+Y+ D +R K++Y K LGG+M W D L+ +S++
Sbjct: 334 MISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKT-----GSDSLIGTALSSM 381
Score = 114 bits (288), Expect = 8e-27
Identities = 35/146 (23%), Positives = 64/146 (43%), Gaps = 23/146 (15%)
Query: 2187 AEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLE 2246
A Y+T+W + P D+ S H++Y+F +L V S + DLE
Sbjct: 18 ATGSINAVYFTNWG---IYGRNFQPADLQASKILHVLYSFMNLRVDGTV-YSGDTYADLE 73
Query: 2247 QGF------------YEKITKFNE-----RGIQVILAIGGWSDSRSDKYSRLVNDIPARR 2289
+ + Y + + + R ++++L+IGGW+ S + + R
Sbjct: 74 KHYSDDSWNDIGTNAYGCVKQLYKLKKANRSLKIMLSIGGWTWS--TNFPAAASTEATRA 131
Query: 2290 NFVRHVTEFLEFYGFNGLEFAWEYPK 2315
F + EF++ +GF+G++ WEYP
Sbjct: 132 TFAKTAVEFMKDWGFDGIDVDWEYPA 157
Score = 81.6 bits (202), Expect = 6e-16
Identities = 22/76 (28%), Positives = 31/76 (40%), Gaps = 9/76 (11%)
Query: 2328 WTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNL 2385
TV+ DS A Y+Y+ + +SYD +R K K GLGG+M W D
Sbjct: 313 ATVITDS-AAGATYSYDSSSRTMISYDTPDMVRTKVSYAKGLGLGGSMFWEASADKT--- 368
Query: 2386 CSCGPYPLLSAVNYEL 2401
G L+ +
Sbjct: 369 ---GSDSLIGTALSSM 381
Score = 41.2 bits (97), Expect = 0.004
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHN 894
V + K G G M W D +
Sbjct: 347 VSYAKGLGLGGSMFWEASADKTGS 370
>1kfw_A Chitinase B; TIM barrel, hydrolase; 1.74A {Arthrobacter SP} SCOP:
c.1.8.5 d.26.3.1
Length = 435
Score = 386 bits (994), Expect = e-120
Identities = 103/457 (22%), Positives = 172/457 (37%), Gaps = 91/457 (19%)
Query: 1705 PSTKDEFKIVCYFTNWAWY-RQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLV------- 1756
ST + ++ V YF W Y R K L + TH+ Y F ++ L
Sbjct: 3 TSTVNGYRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKA 62
Query: 1757 --------IKPHDTWADLDNKF--------------------YEKVTALKKK--GVKVTL 1786
D WAD + + ++ LK K +KV +
Sbjct: 63 QGTGPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMI 122
Query: 1787 AIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHN----------------FDGLDL 1830
++GGW S +S+ ++ +R K ++ ++ ++ N FDG+D+
Sbjct: 123 SLGGWTWS--KNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDI 180
Query: 1831 DWEYPKCWQVDCKQG--PASDKQGFADLIKELRAAFNPH------DLLLSAAVSPSKAVI 1882
DWE+P G +D+ F L+ E R + + +LSA + + A I
Sbjct: 181 DWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADI 240
Query: 1883 DNA-YDIPVMSENLDWISVMTYDYHGQWDKK-TGHVAPMYALPNDTTPT---FNANYSLH 1937
D +D P ++LD+ S+ YD HG W+ TGH A +Y P D F+A+ ++
Sbjct: 241 DAGGWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVK 300
Query: 1938 YWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICD 1997
+++ G D K++ G+ YG+ +T A G T Y ++
Sbjct: 301 KYLAAGIDPKQLGLGLAAYGRGWTGAKNVSPW---GPATDGAPG--TYETANEDYDKLK- 354
Query: 1998 KIQKDGWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDD 2057
D + + G QW +D+ A K +++ LGG M W L D
Sbjct: 355 ----TLGTDHYDAATG-SAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDR 409
Query: 2058 FKNFCGCESYPLLKTINRVLRNYPGPGPNCFLKPVPP 2094
L+ ++ R PGP + PP
Sbjct: 410 N--------GELVGAMSDKFRA-AAPGPVT--EAAPP 435
Score = 262 bits (672), Expect = 4e-77
Identities = 90/493 (18%), Positives = 159/493 (32%), Gaps = 145/493 (29%)
Query: 384 KVVCYVTNWSG-SRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGN--------- 433
+ V Y W R K + + K THI Y+F +++ TL+ N
Sbjct: 10 RNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPNG 69
Query: 434 ------PEADIDDNFYQRISSSPLVT-------------------HGKVKILIAIGGWTD 468
AD + S S + K+K++I++GGWT
Sbjct: 70 SDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWTW 129
Query: 469 SSGEKYSQLISSGSNRKKFIKSVLTFLRRFD----------------FAGLHFDWNYPVC 512
S +S+ ++ ++R+K + S + + + F G+ DW +P
Sbjct: 130 SK--NFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPGT 187
Query: 513 WQADCSKQHK--ADKGNFVKLIQELKAEFDKH------DY--SIAVGISGYKEILEVAYD 562
D+ NF L+ E + + D + Y S + + +I +D
Sbjct: 188 NSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLP-ANPADIDAGGWD 246
Query: 563 FPALNDHVEFMSLMSYDYHGAWEG-ITGLVSPLNSRPGEPYP---NYNINTALKLIDELG 618
PA ++F S+ YD HGAW +TG + L P +P ++ + A+K G
Sbjct: 247 DPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYLAAG 306
Query: 619 GDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRK 678
D +++ + G+ AY R
Sbjct: 307 IDPKQLGL------------------------------------GLAAY--------GRG 322
Query: 679 WTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKW 738
WT K+ T + Y ++
Sbjct: 323 WT---GAKN--------------VSPWGPATDGA---PGTYETANEDYDKLK-----TLG 357
Query: 739 TVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCME 798
T + + + + G QW SY++ + +K +I S G G M W + D
Sbjct: 358 TDHYDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDRNG------ 411
Query: 799 SFPLLRAVNRAFG 811
L+ A++ F
Sbjct: 412 --ELVGAMSDKFR 422
Score = 225 bits (576), Expect = 2e-64
Identities = 72/349 (20%), Positives = 124/349 (35%), Gaps = 81/349 (23%)
Query: 1340 FKIVCYFTNWAWY-RPGKGKYVLKKVPW-------------------------------- 1366
++ V YF W Y R + K +
Sbjct: 9 YRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPN 68
Query: 1367 --INILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFYERVVTLKKK--GVKVSLAIG 1422
+ G D+ + + ++ LK K +KV +++G
Sbjct: 69 GSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGS---FNQLKQLKAKNPKLKVMISLG 125
Query: 1423 GWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKY----------------QFDGLDLDWE 1466
GW S +S+ + +RQ+ + + +K FDG+D+DWE
Sbjct: 126 GWTWS--KNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWE 183
Query: 1467 YPTCWQVNCDAGPDS--DKESFGLFVRELHQAFKPHG------LLLSAAVSPSKQVINAA 1518
+P G D+ D+ +F + E + +G +LSA + + I+A
Sbjct: 184 WPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANPADIDAG 243
Query: 1519 -YDVKALSESLDWISVMTYDYHGQWDKK-TGHVAPLYEHPDD---DFFYFNANFTMNYWM 1573
+D A +SLD+ S+ YD HG W+ TGH A LY+ P D F+A+ + ++
Sbjct: 244 GWDDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPADPRAPSKKFSADKAVKKYL 303
Query: 1574 KKGAPSRKLVMGVHPLLS-TITEVLGHGPG--------GNYESTTEEYK 1613
G ++L +G+ T P G YE+ E+Y
Sbjct: 304 AAGIDPKQLGLGL-AAYGRGWTGAKNVSPWGPATDGAPGTYETANEDYD 351
Score = 184 bits (470), Expect = 2e-50
Identities = 74/458 (16%), Positives = 142/458 (31%), Gaps = 105/458 (22%)
Query: 8 SQSTKHQVVCYVEAKSAYRHRPATFNVKNVI----PQTCTHVIYAYAAIDPVSRALIP-- 61
S ++ V Y Y R F K + + TH+ Y++ I+ +
Sbjct: 4 STVNGYRNVGYFAQWGVYG-RA--FQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMAN 60
Query: 62 ---------------------------------EDLEYDVIKGGYKSFLGLKEANPELKV 88
D + G + LK NP+LKV
Sbjct: 61 KAQGTGPNGSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKV 120
Query: 89 YLAV-----KSNFVSITSDRESRLNFISSVLEMFDMYK----------------FDGLDL 127
+++ NF + SR +SS ++++ FDG+D+
Sbjct: 121 MISLGGWTWSKNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDI 180
Query: 128 NVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTL----RRNNYQLTLTS-----P 175
D P N + N+R++F + E L NN + L++ P
Sbjct: 181 ---DWEWPGTNSGLAGNGVDTVNDRANFKALLAEFRKQLDAYGSTNNKKYVLSAFLPANP 237
Query: 176 GVIDRKTSLVDISVVAPLVDLILLKSFN-----NDHMDDEVVPVKPNTKVNIQVTSTIAN 230
ID D +D ++ ++ N + + + +
Sbjct: 238 ADID-AGGW-DDPANFKSLDFGSIQGYDLHGAWNPTLTGHQANLYDDPAD----PRAPSK 291
Query: 231 FNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPG 290
+ + AV ++ G P+Q+ +G+ +G+ + T
Sbjct: 292 KFSADKAVKKYLAAGIDPKQLGLGLAAYGRGWT--GAKNVSPWGPATDGA---PGTYETA 346
Query: 291 YLAFFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAML 350
+ ++ H+ + G + +W +Y+N + ++K +YI + LGG M
Sbjct: 347 NEDYDKLKTLG----TDHYDAATGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMW 402
Query: 351 WTLDLDDFRGFCGQKYPLLSAVVSNLQPEEPEPKVVCY 388
W L D L+ A+ + P P
Sbjct: 403 WELSGDRN-------GELVGAMSDKFRAAAPGPVTEAA 433
Score = 99.1 bits (247), Expect = 2e-21
Identities = 28/182 (15%), Positives = 56/182 (30%), Gaps = 56/182 (30%)
Query: 2190 YKVICYYTSWA-YLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQ- 2247
Y+ + Y+ W Y R + K TH+ Y+F +++ Q L N
Sbjct: 9 YRNVGYFAQWGVYGRAFQAKQLDVSGTAKNLTHINYSFGNINNQTLTCFMANKAQGTGPN 68
Query: 2248 ----------------------------------GFYEKIT--KFNERGIQVILAIGGWS 2271
G + ++ K ++V++++GGW+
Sbjct: 69 GSDGAGDAWADFGMGYAADKSVSGKADTWDQPLAGSFNQLKQLKAKNPKLKVMISLGGWT 128
Query: 2272 DSRSDKYSRLVNDIPARRNFVRHVTEFLEFYG----------------FNGLEFAWEYPK 2315
S +S+ +R+ V + F+G++ WE+P
Sbjct: 129 WS--KNFSKAAATEASRQKLVSSCIDLYIKGNLPNFEGRGGAGAAAGIFDGIDIDWEWPG 186
Query: 2316 CW 2317
Sbjct: 187 TN 188
Score = 82.9 bits (205), Expect = 3e-16
Identities = 20/78 (25%), Positives = 31/78 (39%), Gaps = 9/78 (11%)
Query: 2328 WTVVRDSLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNLCS 2387
T D+ + Y+G W SYD+ ++K I GLGG M W + D
Sbjct: 357 GTDHYDAA-TGSAWRYDGTQWWSYDNIATTKQKTDYIVSKGLGGGMWWELSGDRN----- 410
Query: 2388 CGPYPLLSAVNYELRNTT 2405
L+ A++ + R
Sbjct: 411 ---GELVGAMSDKFRAAA 425
Score = 40.2 bits (94), Expect = 0.008
Identities = 7/26 (26%), Positives = 9/26 (34%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKC 896
+I S G G M W + D
Sbjct: 389 TDYIVSKGLGGGMWWELSGDRNGELV 414
>1goi_A Chitinase B; chitin degradation, hydrolase, glycosidase; 1.45A
{Serratia marcescens} SCOP: b.72.2.1 c.1.8.5 d.26.3.1
PDB: 1o6i_A* 1e6r_A* 1e15_A 1gpf_A* 1ur8_A* 1w1p_A*
1w1t_A* 1w1v_A* 1w1y_A* 1e6p_A 1e6n_A 1h0g_A* 1h0i_A*
1ogb_A 1ogg_A* 1e6z_A* 1ur9_A*
Length = 499
Score = 384 bits (988), Expect = e-118
Identities = 87/479 (18%), Positives = 164/479 (34%), Gaps = 87/479 (18%)
Query: 1709 DEFKIVCYF-------TNWAWYRQSGGKYLPSDIDS---DLCTHVIYGFAVLDTDQLVIK 1758
++ Y+ N+ S + S+I TH+ + F ++++
Sbjct: 3 TRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAW 62
Query: 1759 PHDTWADLDNKFYEKVTALKKK--GVKVTLAIGGWNDS-----AGNKYSRLVNSQQARSK 1811
T ++TALK +++ +IGGW S + Y V + +R+K
Sbjct: 63 DPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAK 122
Query: 1812 FIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPH---- 1867
F V + ++ FDG+++DWEYP+ A++ GF ++E+R N
Sbjct: 123 FAQSCVRIMKDYGFDGVNIDWEYPQ----------AAEVDGFIAALQEIRTLLNQQTITD 172
Query: 1868 -----DLLLSAAVSPSKAVIDNAY-DIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYA 1921
L+ A + + Y + + LD+I++MTYD G W+K T H A ++
Sbjct: 173 GRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFG 232
Query: 1922 LPNDTTPT------------------------FNANYSL-HYWVSHGADRKKVIFGMPMY 1956
T + ++ + + G K++ G+P Y
Sbjct: 233 DAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFY 292
Query: 1957 GQSFTLADKNKNGLNSQTYGGAEA--------------GENTRARGFLAYYEICDKIQKD 2002
G++F G S E + +Y ++ +Q +
Sbjct: 293 GRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLVGCEECVRDKDPRIASYRQLEQMLQGN 352
Query: 2003 -GWVVVRDRKRRIGPYAFKGD--QWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFK 2059
G+ + + K + PY + +V +DD +KA+++K LGG M W L D+
Sbjct: 353 YGYQRLWNDKTK-TPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRN 411
Query: 2060 NFCGCESYPLLKTINRVLRNYPGPGPNCFLKPVPPKHEDNVPQTTGTQYEEDETLSDDT 2118
LL ++R + +
Sbjct: 412 G-------DLLAALDRYFNAADYDDSQLDMGTGLRYTGVGPGNLPIMTAPAYVPGTTYA 463
Score = 289 bits (740), Expect = 2e-85
Identities = 87/518 (16%), Positives = 169/518 (32%), Gaps = 120/518 (23%)
Query: 384 KVVCY-------VTNWSGSRKSDGKFVPENIDYKLC---THIVYAFASLDPNTLSIQAGN 433
V+ Y + N++ + S F NI THI ++F ++ N
Sbjct: 6 AVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECAWDPA 65
Query: 434 PEADIDDNFYQRISSSPL-VTHGKVKILIAIGGWTDSSG-----EKYSQLISSGSNRKKF 487
+ R+++ L + ++I+ +IGGW S+ Y + + ++R KF
Sbjct: 66 TNDAKARDVVNRLTA--LKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRAKF 123
Query: 488 IKSVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKH----- 542
+S + ++ + F G++ DW YP A+ F+ +QE++ ++
Sbjct: 124 AQSCVRIMKDYGFDGVNIDWEYPQA----------AEVDGFIAALQEIRTLLNQQTITDG 173
Query: 543 ----DY--SIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNS 596
Y +IA G + + +++++LM+YD G WE +T + L
Sbjct: 174 RQALPYQLTIAGA-GGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQAALFG 232
Query: 597 RPGEPYP------------------------NYNINTALKL-IDELGGDKRKIVIGVPFY 631
P + ++ A++ + G KIV+GVPFY
Sbjct: 233 DAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVMGVPFY 292
Query: 632 GQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPR 691
G+++ G + PG +
Sbjct: 293 GRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYW---------------------------- 324
Query: 692 SMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRK-WTVQRNTKSLEPF 750
+ P + +Y ++ ++ + N K+ P+
Sbjct: 325 -----------------LVGCEECVRDKDPRIASYRQLEQMLQGNYGYQRLWNDKTKTPY 367
Query: 751 TFQGD--QWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNR 808
+ +V+Y+D S K K+IK G+M W + D+ + LL A++R
Sbjct: 368 LYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQDNRNG-------DLLAALDR 420
Query: 809 AFGRLKDKKPSAPDCTRPTVSTPSPIGTSTTEDSVSSN 846
F T + P
Sbjct: 421 YFNAADYDDSQLDMGTGLRYTGVGPGNLPIMTAPAYVP 458
Score = 217 bits (553), Expect = 1e-60
Identities = 57/302 (18%), Positives = 103/302 (34%), Gaps = 74/302 (24%)
Query: 1341 KIVCYF-------TNWAWYRPGKGKYVLKKVPWINILKLYVTLQT-------GLGTDQEK 1386
++ Y+ N+ + + NI T + ++ E
Sbjct: 6 AVIGYYFIPTNQINNYTETDTSVVPFPVS-----NITPAKAKQLTHINFSFLDINSNLEC 60
Query: 1387 ENTFLKISELTYVHILFYERVVTLKKK--GVKVSLAIGGWNDS-----LGGKYSRLVNSA 1439
R+ LK +++ +IGGW S Y V +
Sbjct: 61 AWDPATNDAKARDV---VNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTP 117
Query: 1440 TARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKP 1499
+R +F + V+ + Y FDG+++DWEYP ++ + F ++E+
Sbjct: 118 ASRAKFAQSCVRIMKDYGFDGVNIDWEYPQ----------AAEVDGFIAALQEIRTLLNQ 167
Query: 1500 HGL---------LLSAAVSPSKQVINAAY-DVKALSESLDWISVMTYDYHGQWDKKTGHV 1549
+ L+ A + ++ Y + + LD+I++MTYD G W+K T H
Sbjct: 168 QTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNHQ 227
Query: 1550 APLYEHPDD------------------------DFFYFNANFTMN-YWMKKGAPSRKLVM 1584
A L+ F + + + M +G PS K+VM
Sbjct: 228 AALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIVM 287
Query: 1585 GV 1586
GV
Sbjct: 288 GV 289
Score = 204 bits (521), Expect = 2e-56
Identities = 75/460 (16%), Positives = 155/460 (33%), Gaps = 96/460 (20%)
Query: 10 STKHQVVCYVEAK-------SAYRHRPATFNVKNVIP---QTCTHVIYAYAAIDPVSRAL 59
ST+ V+ Y + F V N+ P + TH+ +++ I+
Sbjct: 2 STRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECA 61
Query: 60 IPEDLEYDVIKGGYKSFLGLKEANPELKVYLAV------------KSNFVSITSDRESRL 107
+ LK NP L++ ++ +N+V+ SR
Sbjct: 62 WDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRA 121
Query: 108 NFISSVLEMFDMYKFDGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTL- 163
F S + + Y FDG+++ D P A E F +QE+ + L
Sbjct: 122 KFAQSCVRIMKDYGFDGVNI---DWEYPQ------------AAEVDGFIAALQEIRTLLN 166
Query: 164 --------RRNNYQLTLTSPGVIDR-KTSLVDISVVAPLVDLILL--------------- 199
+ YQLT+ G ++ + +D I L
Sbjct: 167 QQTITDGRQALPYQLTIAGAGGAFFLSRYYSKLAQIVAPLDYINLMTYDLAGPWEKVTNH 226
Query: 200 ------KSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAV-YNWIKKGARPEQII 252
+ + + + +++AV + + +G +I+
Sbjct: 227 QAALFGDAAGPTFYNALREANLGWSWEELTRAFPSPFSLTVDAAVQQHLMMEGVPSAKIV 286
Query: 253 IGIPFFGKSYRLFNRSEYGLGATVKGPGT--------------EGKYTQMPGYLAFFEVC 298
+G+PF+G++++ + G ++ PG E + P ++ ++
Sbjct: 287 MGVPFYGRAFKGVSGGNGGQYSSHSTPGEDPYPSTDYWLVGCEECVRDKDPRIASYRQLE 346
Query: 299 NKFK-DKTWRHFTDSNGE-PFMVK--KDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLD 354
+ + ++ + + P++ ++TY++ +S + K YIK + LGG M W L
Sbjct: 347 QMLQGNYGYQRLWNDKTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLG 406
Query: 355 LDDFRGFCGQKYPLLSAVVSNLQPEEPEPKVVCYVTNWSG 394
D+ G LL+A+ + + + T
Sbjct: 407 QDNRNG------DLLAALDRYFNAADYDDSQLDMGTGLRY 440
Score = 114 bits (287), Expect = 3e-26
Identities = 27/145 (18%), Positives = 51/145 (35%), Gaps = 17/145 (11%)
Query: 2187 AEPYKVICYYTS-------WAYLRQAEGKYSPEDID---GSLCTHLVYAFADLDEQELVI 2236
+ VI YY + + + +I TH+ ++F D++
Sbjct: 2 STRKAVIGYYFIPTNQINNYTETDTSVVPFPVSNITPAKAKQLTHINFSFLDINSNLECA 61
Query: 2237 RSHNNKLDLEQGFYEKITKFNE--RGIQVILAIGGWSDS-----RSDKYSRLVNDIPARR 2289
+ ++T ++++ +IGGW S Y V +R
Sbjct: 62 WDPATNDAKARDVVNRLTALKAHNPSLRIMFSIGGWYYSNDLGVSHANYVNAVKTPASRA 121
Query: 2290 NFVRHVTEFLEFYGFNGLEFAWEYP 2314
F + ++ YGF+G+ WEYP
Sbjct: 122 KFAQSCVRIMKDYGFDGVNIDWEYP 146
Score = 81.1 bits (200), Expect = 1e-15
Identities = 22/94 (23%), Positives = 39/94 (41%), Gaps = 10/94 (10%)
Query: 2323 VKSHEWTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLD 2380
++ + + + + PY Y+ L+++YDD + K K IKQ LGG M W + D
Sbjct: 350 QGNYGYQRLWND-KTKTPYLYHAQNGLFVTYDDAESFKYKAKYIKQQQLGGVMFWHLGQD 408
Query: 2381 DFQNLCSCGPYPLLSAVNYELRNTTLNYEPKDCT 2414
+ LL+A++ + D
Sbjct: 409 NRNG-------DLLAALDRYFNAADYDDSQLDMG 435
Score = 42.2 bits (99), Expect = 0.002
Identities = 7/27 (25%), Positives = 12/27 (44%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCC 897
K+IK G+M W + D+ +
Sbjct: 389 AKYIKQQQLGGVMFWHLGQDNRNGDLL 415
>3arx_A Chitinase A; TIM barrel, inhibitor complex, glycosidase, hydrolase,
hydro hydrolase inhibitor complex; HET: POY; 1.16A
{Vibrio harveyi} PDB: 3aro_A* 3arp_A* 3arr_A* 3arv_A*
3arw_A* 3arq_A* 3ary_A* 3arz_A* 3b8s_A 3b9e_A 3b9a_A*
3b9d_A 3as2_A* 3ars_A* 3art_A* 3as0_A* 3as1_A* 3aru_A*
3as3_A*
Length = 584
Score = 381 bits (979), Expect = e-116
Identities = 102/524 (19%), Positives = 175/524 (33%), Gaps = 99/524 (18%)
Query: 1644 TTTTSTTTTTKRPKPPTTTSTTT--TRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP 1701
T S TT + + P T+ + +KP V P
Sbjct: 70 AITGSQTTASFEYGQGGLYQMEIEACDATGCSKSAPVEITIADTDGSHLKPLTMNVDPNN 129
Query: 1702 VIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKP-- 1759
+ + YF W Y G Y ++ D TH++YGF + +K
Sbjct: 130 KSYNTDPS-IVMGTYFVEWGIY---GRDYTVDNMPVDNLTHILYGFIPICGPNESVKSVG 185
Query: 1760 ---------------------HDTWADLDNKF--------------YEKVTALKKK--GV 1782
HD WA F Y + ALK++ +
Sbjct: 186 GNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDL 245
Query: 1783 KVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNF-DGLDLDWEYPKCWQVD 1841
K+ +IGGW S Y ++ R F+A V F+ F DG+D+DWE+P
Sbjct: 246 KIIPSIGGWTLS-DPFYD--FVDKKNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGGAA 302
Query: 1842 CKQG-PASDKQGFADLIKELRAAFNPH------DLLLSAAVSPSKAVIDNAYDIPVMSEN 1894
+G P +D + L++ELR + L++A+ I++ D +
Sbjct: 303 ADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYDKIED-VDYADAVQY 361
Query: 1895 LDWISVMTYDYHGQWDKKTGHVAPMYALPND-----------------TTPTFNANYSLH 1937
+D+I MTYD++G W+ GH +Y P + A+ +
Sbjct: 362 MDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGPAYTADNGIQ 421
Query: 1938 YWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGA-------EAGENTRARGFL 1990
++ G K++ G MYG+ + + + G + G +
Sbjct: 422 LLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQGVWEDGVI 481
Query: 1991 AYYEICDKIQ------KDGWVVVRDRKRRIGPYAFKGD--QWVGFDDQAMIHHKAEFVKY 2042
Y I + +G+ D + P+ + + + FDD + K + K
Sbjct: 482 DYKGIKSFMLGANNTGINGFEYGYDAQAE-APWVWNRSTGELITFDDHRSVLAKGNYAKS 540
Query: 2043 NDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVLRNYPGPGPN 2086
L G W +D D+ +L ++ + PN
Sbjct: 541 LGLAGLFSWEIDADNG---------DILNAMHEGMAGGVVTPPN 575
Score = 267 bits (683), Expect = 6e-77
Identities = 85/527 (16%), Positives = 165/527 (31%), Gaps = 141/527 (26%)
Query: 367 PLLSAVVSNLQPEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNT 426
+ + +P + Y W + +N+ THI+Y F +
Sbjct: 122 TMNVDPNNKSYNTDPSIVMGTYFVEWG---IYGRDYTVDNMPVDNLTHILYGFIPICGPN 178
Query: 427 LSIQAGN-----------------------PEADIDDNFYQRISSSPLVTHG-------- 455
S+++ P A +F Q G
Sbjct: 179 ESVKSVGGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMAL 238
Query: 456 -----KVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFA-GLHFDWNY 509
+KI+ +IGGWT S + + NR F+ SV FL+ + F G+ DW +
Sbjct: 239 KQRNPDLKIIPSIGGWTLSDP--FYDFVDK-KNRDTFVASVKKFLKTWKFYDGVDIDWEF 295
Query: 510 PVCWQADCSKQHKA-DKGNFVKLIQELKAEFDKHDY--------SIAVGISGYKEILEVA 560
P A K D ++ L++EL+ D+ + + A+G+ K +E
Sbjct: 296 PGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYDK--IE-D 352
Query: 561 YDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEP-----------------YP 603
D+ +++++ M+YD++G W + G + L P
Sbjct: 353 VDYADAVQYMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGP 412
Query: 604 NYNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPG 663
Y + ++L+ G K+V+G YG+ + + G T +
Sbjct: 413 AYTADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDP----NDPMTGTATGKL- 467
Query: 664 MLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGM 723
G + + G+
Sbjct: 468 -----------------------------------------------KGSTAQGVWEDGV 480
Query: 724 LAYYEICYRIKTRK------WTVQRNTKSLEPFTFQGD--QWVSYEDPTSLTEKVKFIKS 775
+ Y I + + + ++ P+ + + ++++D S+ K + KS
Sbjct: 481 IDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAKGNYAKS 540
Query: 776 NGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRLKDKKPSAPD 822
G AG+ +W ID D+ +L A++ P+
Sbjct: 541 LGLAGLFSWEIDADN---------GDILNAMHEGMAGGVVTPPNRRS 578
Score = 225 bits (575), Expect = 9e-63
Identities = 76/391 (19%), Positives = 123/391 (31%), Gaps = 77/391 (19%)
Query: 1256 QTSATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEW 1315
AT E +K + T D+ P
Sbjct: 64 VKVATGAITGSQTTASFEYGQGGLYQMEIEACDATGCSKSAPVEITIADTDGSHLKPLTM 123
Query: 1316 VWHPPTEPTTTHISVTEKSPLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPW--------- 1366
P + T D + YF W Y Y + +P
Sbjct: 124 NVDPNNKSYNT----------DPSIVMGTYFVEWGIYGR---DYTVDNMPVDNLTHILYG 170
Query: 1367 -INILKLYVTLQTGLGTDQEKENTFLKISELTYVHIL----------------------- 1402
I I ++++ G T + V I
Sbjct: 171 FIPICGPNESVKSVGGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKG 230
Query: 1403 FYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQF-D 1459
Y ++ LK++ +K+ +IGGW S + V+ R F+ V KFL ++F D
Sbjct: 231 NYAMLMALKQRNPDLKIIPSIGGWTLS--DPFYDFVDKK-NRDTFVASVKKFLKTWKFYD 287
Query: 1460 GLDLDWEYPTCWQVNCDAG-PDSDKESFGLFVRELHQAFKPHG------LLLSAAVSPSK 1512
G+D+DWE+P D G P +D ++ +REL L++A+
Sbjct: 288 GVDIDWEFPGGGGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGY 347
Query: 1513 QVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFF----------- 1561
I D + +D+I MTYD++G W+ GH LY
Sbjct: 348 DKIED-VDYADAVQYMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENG 406
Query: 1562 ------YFNANFTMNYWMKKGAPSRKLVMGV 1586
+ A+ + + +G P+ KLV+G
Sbjct: 407 EPYKGPAYTADNGIQLLLAQGVPANKLVLGT 437
Score = 171 bits (434), Expect = 2e-44
Identities = 72/460 (15%), Positives = 143/460 (31%), Gaps = 105/460 (22%)
Query: 2 ENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP 61
N ++ + Y Y + V N+ TH++Y + I + ++
Sbjct: 127 PNNKSYNTDPSIVMGTYFVEWGIYG---RDYTVDNMPVDNLTHILYGFIPICGPNESVKS 183
Query: 62 E---------------------------DLEYDV----------IKGGYKSFLGLKEANP 84
+ IKG Y + LK+ NP
Sbjct: 184 VGGNSFNALQTACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNP 243
Query: 85 ELKVYLAV-----KSNFVSITSDRESRLNFISSVLEMFDMYKF-DGLDLNVKD---PALN 135
+LK+ ++ F ++R F++SV + +KF DG+D+ D P
Sbjct: 244 DLKIIPSIGGWTLSDPFYDFVDK-KNRDTFVASVKKFLKTWKFYDGVDI---DWEFPG-G 298
Query: 136 DEDDDDLESIANERSDFSTFIQELSSTLRR------NNYQLTLTSPGVIDRKTSLVDISV 189
D N+ + ++EL L Y+LT D K VD +
Sbjct: 299 GGAAADKGDPVNDGPAYIALMRELRVMLDELEAETGRTYELTSAIGVGYD-KIEDVDYAD 357
Query: 190 VAPLVDLILLKS-----------------FNNDHMDDEVVPVKPNTKVNIQVTSTIANFN 232
+D I + + M +
Sbjct: 358 AVQYMDYIFAMTYDFYGGWNNVPGHQTALYCGSFMRPGQCDGGGVDENGEPYKGP---AY 414
Query: 233 NIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLG-------ATVKGPGTEGKY 285
++ + + +G ++++G +G+ + AT K G+ +
Sbjct: 415 TADNGIQLLLAQGVPANKLVLGTAMYGRGWEGVTPDTLTDPNDPMTGTATGKLKGSTAQG 474
Query: 286 TQMPGYLAFFEVCNKFKDK------TWRHFTDSNGE-PFMVKKD--EWITYENNDSIRRK 336
G + + + + + + D+ E P++ + E IT++++ S+ K
Sbjct: 475 VWEDGVIDYKGIKSFMLGANNTGINGFEYGYDAQAEAPWVWNRSTGELITFDDHRSVLAK 534
Query: 337 MNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNL 376
NY K L G W +D D+ +L+A+ +
Sbjct: 535 GNYAKSLGLAGLFSWEIDADNG--------DILNAMHEGM 566
Score = 96.9 bits (241), Expect = 3e-20
Identities = 28/170 (16%), Positives = 59/170 (34%), Gaps = 46/170 (27%)
Query: 2189 PYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKL----- 2243
+ Y+ W Y+ +++ TH++Y F + ++S
Sbjct: 137 SIVMGTYFVEWG---IYGRDYTVDNMPVDNLTHILYGFIPICGPNESVKSVGGNSFNALQ 193
Query: 2244 ------------------DLEQGFYEKITKFNE----------------RGIQVILAIGG 2269
++ F + +++ +++I +IGG
Sbjct: 194 TACRGVNDYEVVIHDPWAAYQKSFPQAGHEYSTPIKGNYAMLMALKQRNPDLKIIPSIGG 253
Query: 2270 WSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGF-NGLEFAWEYPKCWQ 2318
W+ SD + V+ R FV V +FL+ + F +G++ WE+P
Sbjct: 254 WTL--SDPFYDFVDK-KNRDTFVASVKKFLKTWKFYDGVDIDWEFPGGGG 300
Score = 78.4 bits (193), Expect = 1e-14
Identities = 19/100 (19%), Positives = 36/100 (36%), Gaps = 15/100 (15%)
Query: 2311 WEY---PKCWQTCSTVKSHEWTVVRDSLGARGPYAYNG--KLWLSYDDTRDIRRKCKSIK 2365
+Y + + + D+ A P+ +N +++DD R + K K
Sbjct: 481 IDYKGIKSFMLGANNTGINGFEYGYDAQ-AEAPWVWNRSTGELITFDDHRSVLAKGNYAK 539
Query: 2366 QDGLGGAMVWSIDLDDFQNLCSCGPYPLLSAVNYELRNTT 2405
GL G W ID D+ +L+A++ +
Sbjct: 540 SLGLAGLFSWEIDADNG---------DILNAMHEGMAGGV 570
Score = 39.1 bits (91), Expect = 0.021
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDF 892
+ KS G AG+ +W ID D+
Sbjct: 535 GNYAKSLGLAGLFSWEIDADNG 556
>3oa5_A CHI1; TIM barrel, hydrolase; HET: 2PE; 1.74A {Yersinia} PDB: 4a5q_A
Length = 574
Score = 380 bits (977), Expect = e-116
Identities = 105/559 (18%), Positives = 172/559 (30%), Gaps = 63/559 (11%)
Query: 1595 EVLGHGPGGNYESTTEE---YKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTT 1651
E L G E + Y E EP + T T
Sbjct: 23 ENLYFQGSGAMEKEEKSNLIYDKDPGYVWDNKNECEGAAEETYQELNYEPSISADKLTWT 82
Query: 1652 TTKRPKPPTTTSTTTTRPK------------PITTIKPKPTTVKPKPTTTVKPKPTTVK- 1698
T+ K T P K T P
Sbjct: 83 PTRLAKTVFNTYEDDDDFNVLCYFTDWSQYDPRIINKEIRDTGGRSADILRLNTPDGRPF 142
Query: 1699 -------------PKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIY 1745
K + ++ GK +P D D + +
Sbjct: 143 KRLIYSFGGLIGDKKYSADGNASIAVRLGVATDPDDAIANHKGKTIPVDPDGAVLASINC 202
Query: 1746 GFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLV 1803
GF + + L + ++ +L+IGGW+ S +S +
Sbjct: 203 GFTKWEAGDANE---RYNQEKAKGLLGGFRLLHEADKELEFSLSIGGWSMS--GLFSEIA 257
Query: 1804 NSQQARSKFIAHVVNFILEHN-FDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRA 1862
+ R+ F+ + +F F LD+DWEYP P D FA LI+++
Sbjct: 258 KDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNPNSPD-DGANFAILIQQITD 316
Query: 1863 AFNPHDLLLSAAVSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYAL 1922
A + +S A S A ID A +M + I++MTYD+ D K H +Y
Sbjct: 317 AKISNLKGISIASSADPAKIDAANIPALMDAGVTGINLMTYDFFTLGDGKLSHHTNIYRD 376
Query: 1923 PNDTTPTFNANYSLHYWV-SHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAG 1981
P+D ++ + ++ + + D K + G Y ++ A + A G
Sbjct: 377 PSDVYSKYSIDDAVTHLIDEKKVDPKAIFIGYAGYTRNAKNATITTSI----PSEEALKG 432
Query: 1982 ENTRARGFLAYYE---------ICDKIQ------KDGWVVVRDRKRRIGPYAF--KGDQW 2024
T A L +E IC + ++G+ +V D+ + Y + +
Sbjct: 433 TYTDANQTLGSFEYSVLEWTDIICHYMDFEKGEGRNGYKLVHDKVAK-ADYLYSEATKVF 491
Query: 2025 VGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYPLLKTINRVLRNYPGPG 2084
+ D + K +VK LGG IW+ D D+ L + I + P
Sbjct: 492 ISLDTPRSVRDKGRYVKDKGLGGLFIWSGDQDNGI-LTNAAHEGLKRRIKNKV-IDMTPF 549
Query: 2085 PNCFLKPVPPKHEDNVPQT 2103
+ +P E PQ
Sbjct: 550 YLDSDEELPTYTEPAEPQC 568
Score = 300 bits (769), Expect = 2e-88
Identities = 82/490 (16%), Positives = 153/490 (31%), Gaps = 78/490 (15%)
Query: 358 FRGFCGQKYPLLSAVVSNLQPEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVY 417
F G G K S ++ GK +P + D + I
Sbjct: 149 FGGLIGDK------KYSADGNASIAVRLGVATDPDDAIANHKGKTIPVDPDGAVLASINC 202
Query: 418 AFASLDPNTLSIQAGNPEADIDDNFYQRISSSPL-VTHGKVKILIAIGGWTDSSGEKYSQ 476
F + + + + L +++ ++IGGW+ S +S+
Sbjct: 203 GFTKWEAGDANERYNQ---EKAKGLLGGFRL--LHEADKELEFSLSIGGWSMS--GLFSE 255
Query: 477 LISSGSNRKKFIKSVLTFLRRFD-FAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQEL 535
+ R F++ + F +RF F+ L DW YP A D NF LIQ++
Sbjct: 256 IAKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSIGAGNP-NSPDDGANFAILIQQI 314
Query: 536 KAEFDKHDYSIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLN 595
+ I++ S ++ A ++ V ++LM+YD+ +G + +
Sbjct: 315 TDAKISNLKGISIASSADPAKIDAANIPALMDAGVTGINLMTYDFFTLGDGKLSHHTNIY 374
Query: 596 SRPGEPYPNYNINTALK-LIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGL 654
P + Y Y+I+ A+ LIDE D + I IG Y ++ + L
Sbjct: 375 RDPSDVYSKYSIDDAVTHLIDEKKVDPKAIFIGYAGYTRNAKNA----TITTSIPSEEAL 430
Query: 655 AGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLA 714
G YT L +E
Sbjct: 431 KGTYTDANQTLGSFE--------------------------------------------Y 446
Query: 715 GEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTF--QGDQWVSYEDPTSLTEKVKF 772
+ Y + + + + + + + ++S + P S+ +K ++
Sbjct: 447 SVLEWTDIICHYMDFEKGEGRNGYKLVHDKVAKADYLYSEATKVFISLDTPRSVRDKGRY 506
Query: 773 IKSNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRLKDKK--PSAPDCTRPTVST 830
+K G G+ W+ D D+ L A + R K P
Sbjct: 507 VKDKGLGGLFIWSGDQDN---------GILTNAAHEGLKRRIKNKVIDMTPFYLDSDEEL 557
Query: 831 PSPIGTSTTE 840
P+ + +
Sbjct: 558 PTYTEPAEPQ 567
Score = 242 bits (619), Expect = 1e-68
Identities = 69/415 (16%), Positives = 134/415 (32%), Gaps = 62/415 (14%)
Query: 1248 WPYRTKCKQTSATTTSEQVPKPTKKPTKPTKKPTTT--TEYNPPEATTKPSTTT------ 1299
W + +C+ + T E +P+ K T PT T +N E +
Sbjct: 51 WDNKNECEGAAEETYQELNYEPSISADKLTWTPTRLAKTVFNTYEDDDDFNVLCYFTDWS 110
Query: 1300 -----STTTDSGAWTPNPTEWVWHPPTEPTT-THI-----------SVTEKSPLDQYFKI 1342
+ + + + + + ++
Sbjct: 111 QYDPRIINKEIRDTGGRSADILRLNTPDGRPFKRLIYSFGGLIGDKKYSADGNASIAVRL 170
Query: 1343 VCYFTNWAWYRPGKGKYVLKKVPWINILKLYVTLQTGL--GTDQEKENTFLKISELTYVH 1400
KGK + + + G + + +
Sbjct: 171 GVATDPDDAIANHKGKTIPVDPDG--------AVLASINCGFTKWEAGDANERYNQEKAK 222
Query: 1401 ILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKY-Q 1457
L L + ++ SL+IGGW+ S G +S + R F+E + F ++
Sbjct: 223 GLL-GGFRLLHEADKELEFSLSIGGWSMS--GLFSEIAKDEILRTNFVEGIKDFFQRFPM 279
Query: 1458 FDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQVINA 1517
F LD+DWEYP PD D +F + ++++ A + +S A S I+A
Sbjct: 280 FSHLDIDWEYPGSIGAGNPNSPD-DGANFAILIQQITDAKISNLKGISIASSADPAKIDA 338
Query: 1518 AYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMK-KG 1576
A + + I++MTYD+ D K H +Y P D + ++ + + + + K
Sbjct: 339 ANIPALMDAGVTGINLMTYDFFTLGDGKLSHHTNIYRDPSDVYSKYSIDDAVTHLIDEKK 398
Query: 1577 APSRKLVMGVHPL------LSTITEVLGHGPG------------GNYESTTEEYK 1613
+ + +G +TIT + G++E + E+
Sbjct: 399 VDPKAIFIGY-AGYTRNAKNATITTSIPSEEALKGTYTDANQTLGSFEYSVLEWT 452
Score = 197 bits (501), Expect = 3e-53
Identities = 65/409 (15%), Positives = 138/409 (33%), Gaps = 56/409 (13%)
Query: 9 QSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDV 68
S ++ + A + + + + + E +
Sbjct: 164 ASIAVRLGVATDPDDAIANHKGKTIPVDPDGAVLASINCGFTKWEAGD---ANERYNQEK 220
Query: 69 IKGGYKSFLGLKEANPELKVYLAV-----KSNFVSITSDRESRLNFISSVLEMFDMYK-F 122
KG F L EA+ EL+ L++ F I D R NF+ + + F + F
Sbjct: 221 AKGLLGGFRLLHEADKELEFSLSIGGWSMSGLFSEIAKDEILRTNFVEGIKDFFQRFPMF 280
Query: 123 DGLDLNVKD---PALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVID 179
LD+ D P + + ++ ++F+ IQ+++ N +++ S
Sbjct: 281 SHLDI---DWEYPGSIGAGNP---NSPDDGANFAILIQQITDAKISNLKGISIASSADPA 334
Query: 180 RKTSLVDISVVAPLVDLILL------KSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNN 233
+ + +++ V I L + + +T + + + ++
Sbjct: 335 KIDAANIPALMDAGVTGINLMTYDFFTLGDG--------KLSHHTNIYRDPSDVYSKYS- 385
Query: 234 IESAVYNWIK-KGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYL 292
I+ AV + I K P+ I IG + ++ + + +G YT L
Sbjct: 386 IDDAVTHLIDEKKVDPKAIFIGYAGYTRNAKNATITTSIPS----EEALKGTYTDANQTL 441
Query: 293 AFFE---------VCNKFKDKT------WRHFTDSNGE-PFMV--KKDEWITYENNDSIR 334
FE +C+ + ++ D + ++ +I+ + S+R
Sbjct: 442 GSFEYSVLEWTDIICHYMDFEKGEGRNGYKLVHDKVAKADYLYSEATKVFISLDTPRSVR 501
Query: 335 RKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNLQPEEPEP 383
K Y+KD+ LGG +W+ D D+ L + + + P
Sbjct: 502 DKGRYVKDKGLGGLFIWSGDQDNGILTNAAHEGLKRRIKNKVIDMTPFY 550
Score = 104 bits (260), Expect = 1e-22
Identities = 30/157 (19%), Positives = 57/157 (36%), Gaps = 14/157 (8%)
Query: 2170 YTHIE------SKQSNQQEQIRYAEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLV 2223
+ + + ++ + +GK P D DG++ +
Sbjct: 142 FKRLIYSFGGLIGDKKYSADGNASIAVRLGVATDPDDAIANHKGKTIPVDPDGAVLASIN 201
Query: 2224 YAFADLDEQELVIRSHNNKLDLEQGFYEKIT--KFNERGIQVILAIGGWSDSRSDKYSRL 2281
F + + R + K +G ++ ++ L+IGGWS S +S +
Sbjct: 202 CGFTKWEAGDANERYNQEKA---KGLLGGFRLLHEADKELEFSLSIGGWSM--SGLFSEI 256
Query: 2282 VNDIPARRNFVRHVTEFLEFYG-FNGLEFAWEYPKCW 2317
D R NFV + +F + + F+ L+ WEYP
Sbjct: 257 AKDEILRTNFVEGIKDFFQRFPMFSHLDIDWEYPGSI 293
Score = 85.7 bits (212), Expect = 7e-17
Identities = 25/100 (25%), Positives = 44/100 (44%), Gaps = 4/100 (4%)
Query: 2315 KCWQTCSTVKSHEWTVVRDSLGARGPYAYN--GKLWLSYDDTRDIRRKCKSIKQDGLGGA 2372
+ + +V D + A+ Y Y+ K+++S D R +R K + +K GLGG
Sbjct: 457 HYMDFEKGEGRNGYKLVHDKV-AKADYLYSEATKVFISLDTPRSVRDKGRYVKDKGLGGL 515
Query: 2373 MVWSIDLDDFQNLCSCGPYPLLSAVNYELRNTTLNYEPKD 2412
+WS D D+ L + L + ++ + T Y D
Sbjct: 516 FIWSGDQDNGI-LTNAAHEGLKRRIKNKVIDMTPFYLDSD 554
Score = 46.4 bits (110), Expect = 1e-04
Identities = 15/84 (17%), Positives = 24/84 (28%), Gaps = 3/84 (3%)
Query: 1282 TTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWVWHPPTEPTTTHISVTEKSPLDQYFK 1341
Y T + P+ PT +V D F
Sbjct: 45 KDPGYVWDNKNECEGAAEETYQELNY---EPSISADKLTWTPTRLAKTVFNTYEDDDDFN 101
Query: 1342 IVCYFTNWAWYRPGKGKYVLKKVP 1365
++CYFT+W+ Y P ++
Sbjct: 102 VLCYFTDWSQYDPRIINKEIRDTG 125
Score = 41.8 bits (98), Expect = 0.003
Identities = 12/58 (20%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKCCMDKSRFRKIEGEKAKCTGLYQINSVNSFPNW 928
+++K G G+ W+ D D+ + R+I+ + T Y ++S P +
Sbjct: 504 GRYVKDKGLGGLFIWSGDQDNGILTNAAHEGLKRRIKNKVIDMTPFY-LDSDEELPTY 560
>3fnd_A Chitinase; TIM-barrel, structural genomics, PSI-2, P structure
initiative, NEW YORK SGX research center for STRU
genomics, nysgxrc; 1.90A {Bacteroides thetaiotaomicron}
PDB: 3co4_A
Length = 312
Score = 331 bits (850), Expect = e-102
Identities = 65/378 (17%), Positives = 128/378 (33%), Gaps = 77/378 (20%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFY 1771
++ Y W + L I+ TH+ FA + D + + +
Sbjct: 5 VVIGYLALDDWEF----ESLFPTIEWKYLTHINASFARVKADGTL-----NINPVRKRIE 55
Query: 1772 EKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLD 1831
K VK+ +++ + +++ +N +AR + I ++ F E+ DG D+D
Sbjct: 56 SVRETAHKHNVKILISLAKNSPG---EFTTAINDPKARKELIQQIIAFTKEYKLDGFDID 112
Query: 1832 WEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN--PHDLLLSAAVSPSKAVIDNAYDIP 1889
+E + F L+ R + ++L++ AV+ ++
Sbjct: 113 YEEYDN-----------WDKNFPSLLVFARGLYLAKEKNMLMTCAVNSRWLNYGTEWE-- 159
Query: 1890 VMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSH-GADRKK 1948
+ D+I++M+YD DK H + L YW A + K
Sbjct: 160 ---QYFDYINLMSYDRGAFTDKPVQH-----------ASYDDFVKDLKYWNEQCRASKSK 205
Query: 1949 VIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVR 2008
++ G+P YG S+ + + G + + Y I + +
Sbjct: 206 IVGGLPFYGYSWEESLQ----------GAVDDV------RGIRYSGILKHLGNEAAD--- 246
Query: 2009 DRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCESYP 2068
++ + I +K +F+K ND G MIW L D +
Sbjct: 247 ----------KDNIGKTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDAHNDNYD---LK 293
Query: 2069 LLKTINRVLRNYPGPGPN 2086
L+ + R + G +
Sbjct: 294 LINVVGREMM---EEGHH 308
Score = 204 bits (521), Expect = 2e-58
Identities = 57/329 (17%), Positives = 104/329 (31%), Gaps = 66/329 (20%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPN-TLSIQAGNPEADIDDNF 442
V+ Y+ +S + I++K THI +FA + + TL+I +
Sbjct: 5 VVIGYLALDDWEFES----LFPTIEWKYLTHINASFARVKADGTLNIN------PVRKRI 54
Query: 443 YQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
VKILI++ + +++ I+ RK+ I+ ++ F + + G
Sbjct: 55 ESVRE---TAHKHNVKILISLAKNSPG---EFTTAINDPKARKELIQQIIAFTKEYKLDG 108
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFD--KHDYSIAVGISGYKEILEVA 560
D+ NF L+ + + + + + ++
Sbjct: 109 FDIDYEEY-----------DNWDKNFPSLLVFARGLYLAKEKNMLMTCAVNSRW-----L 152
Query: 561 YDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALK-LIDELGG 619
+ ++++LMSYD + + LK ++
Sbjct: 153 NYGTEWEQYFDYINLMSYDRGAFTDKPVQ-----------HASYDDFVKDLKYWNEQCRA 201
Query: 620 DKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKW 679
K KIV G+PFYG S+ L GA D G + Y I +
Sbjct: 202 SKSKIVGGLPFYGYSWEESLQ-----GAVDDVRG-----------IRYSGILKHLGNEAA 245
Query: 680 TVQRNTK-SLEPRSMGTLKLD--KEHGLG 705
K R K KE+
Sbjct: 246 DKDNIGKTYYNGRPTIANKCKFIKENDYA 274
Score = 199 bits (508), Expect = 7e-57
Identities = 44/254 (17%), Positives = 90/254 (35%), Gaps = 56/254 (22%)
Query: 1341 KIVCYFTNWAWYRPGKGKYVLKKVPW-----INILKLYVTLQTGLGTDQEKENTFLKISE 1395
++ Y W + + W IN V L + ++
Sbjct: 5 VVIGYLALDDWEFE----SLFPTIEWKYLTHINASFARVKADGTLNINPVRKR------- 53
Query: 1396 LTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLK 1455
T K VK+ +++ + G+++ +N AR+ I+ ++ F +
Sbjct: 54 -------IESVRETAHKHNVKILISLAKNS---PGEFTTAINDPKARKELIQQIIAFTKE 103
Query: 1456 YQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAF--KPHGLLLSAAVSPSKQ 1513
Y+ DG D+D+E D+ ++F + + K +L++ AV+
Sbjct: 104 YKLDGFDIDYEE-----------YDNWDKNFPSLLVFARGLYLAKEKNMLMTCAVNSRWL 152
Query: 1514 VINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWM 1573
++ + D+I++M+YD DK H + Y + + YW
Sbjct: 153 NYGTEWE-----QYFDYINLMSYDRGAFTDKPVQHAS-----------YDDFVKDLKYWN 196
Query: 1574 -KKGAPSRKLVMGV 1586
+ A K+V G+
Sbjct: 197 EQCRASKSKIVGGL 210
Score = 181 bits (461), Expect = 1e-50
Identities = 52/373 (13%), Positives = 107/373 (28%), Gaps = 75/373 (20%)
Query: 15 VVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGGYK 74
V+ Y+ + + TH+ ++A + L + +
Sbjct: 6 VIGYLALDDWEFESL----FPTIEWKYLTHINASFARVKA-DGTLNINPVRKRI------ 54
Query: 75 SFLGLKEANPELKVYLAV----KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVK 130
+ +K+ +++ F + +D ++R I ++ YK DG D+
Sbjct: 55 ESVRETAHKHNVKILISLAKNSPGEFTTAINDPKARKELIQQIIAFTKEYKLDGFDI--- 111
Query: 131 DPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVIDRKTSLVDISVV 190
D E N +F + + + +T +
Sbjct: 112 ----------DYEEYDNWDKNFPSLLVFARGLYLAKEKNMLMTCAVNSRWLNYGTEW--- 158
Query: 191 APLVDLILLKSFNND-HMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPE 249
D I L S+ D + + + + ++ Y + A
Sbjct: 159 EQYFDYINLMSY--DRGAFTD--KPVQHA----------SYDDFVKDLKYWNEQCRASKS 204
Query: 250 QIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHF 309
+I+ G+PF+G S+ +++G + + + G L KD
Sbjct: 205 KIVGGLPFYGYSWEE----------SLQGAVDDVRGIRYSGILKHLGNEAADKDNIG--- 251
Query: 310 TDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLL 369
Y +I K +IK+ G M+W L D L+
Sbjct: 252 --------------KTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDAHNDNY--DLKLI 295
Query: 370 SAVVSNLQPEEPE 382
+ V + E
Sbjct: 296 NVVGREMMEEGHH 308
Score = 116 bits (293), Expect = 3e-28
Identities = 20/128 (15%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 2191 KVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFY 2250
VI Y + E + I+ TH+ +FA + + N + +
Sbjct: 5 VVIGYLALDDW----EFESLFPTIEWKYLTHINASFARVKADGTL-----NINPVRKRIE 55
Query: 2251 EKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFA 2310
++ +++++++ S +++ +ND AR+ ++ + F + Y +G +
Sbjct: 56 SVRETAHKHNVKILISLAKNS---PGEFTTAINDPKARKELIQQIIAFTKEYKLDGFDID 112
Query: 2311 WEYPKCWQ 2318
+E W
Sbjct: 113 YEEYDNWD 120
Score = 86.2 bits (214), Expect = 6e-18
Identities = 20/97 (20%), Positives = 29/97 (29%), Gaps = 16/97 (16%)
Query: 715 GEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIK 774
G G+ Y I + Y ++ K KFIK
Sbjct: 223 GAVDDVRGI-RYSGILKHLGNEAAD------------KDNIGKTYYNGRPTIANKCKFIK 269
Query: 775 SNGYAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFG 811
N YAG+M W + D ++ L+ V R
Sbjct: 270 ENDYAGVMIWQLFQDAHNDNY---DLKLINVVGREMM 303
Score = 71.9 bits (177), Expect = 3e-13
Identities = 14/68 (20%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Query: 2341 YAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVWSIDLDDFQNLCSCGPYPLLSAVNYE 2400
+ Y+ I KCK IK++ G M+W + D + L++ V E
Sbjct: 245 ADKDNIGKTYYNGRPTIANKCKFIKENDYAGVMIWQLFQDAHNDNY---DLKLINVVGRE 301
Query: 2401 LRNTTLNY 2408
+ ++
Sbjct: 302 MMEEGHHH 309
Score = 45.4 bits (108), Expect = 1e-04
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 871 VKFIKSNGYAGIMAWTIDLDDFHNKC 896
KFIK N YAG+M W + D ++
Sbjct: 265 CKFIKENDYAGVMIWQLFQDAHNDNY 290
>3cz8_A Putative sporulation-specific glycosylase YDHD; structural genomics,
uncharacterized protein, protein struct initiative,
PSI-2; 2.20A {Bacillus subtilis subsp}
Length = 319
Score = 283 bits (727), Expect = 4e-86
Identities = 54/358 (15%), Positives = 123/358 (34%), Gaps = 56/358 (15%)
Query: 1719 NWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLV----IKPHDTWADLDNKFYEKV 1774
+ + Y + + DL +I +A + + I P+ A+ N
Sbjct: 2 SLSNYIAGTLSFYVLR-NPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAAIE 60
Query: 1775 TALKK--KGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDW 1832
T ++ + + S +++N+ AR+ + ++ + + + G+ +D+
Sbjct: 61 TTWQRRVTPLATITNLTSGGFS-TEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTIDF 119
Query: 1833 EYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSP---SKAVIDNAYDIP 1889
E A+D+ F +++LR +L+ AV YD
Sbjct: 120 EQV----------SAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIPWLRGYDYG 169
Query: 1890 VMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKV 1949
+ ++++ +M YD+H + G VAP+ ++ + ++ +K+
Sbjct: 170 GIGAVVNYMFIMAYDWHHAGS-EPGPVAPIT----------EIRRTIEFTIA-QVPSRKI 217
Query: 1950 IFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRD 2009
I G+P+YG + + + T A ++ + +
Sbjct: 218 IIGVPLYGYDWIIPYQP----------------GTVASAIS-NQNAIERAMRYQAPIQYS 260
Query: 2010 RKRRIGPYAFKGDQ-----WVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFC 2062
+ + P+ DQ V F+ + K + V+ L W L L + +
Sbjct: 261 AEYQS-PFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAEGHHHH 317
Score = 219 bits (560), Expect = 1e-63
Identities = 57/415 (13%), Positives = 127/415 (30%), Gaps = 106/415 (25%)
Query: 384 KVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFY 443
+ ++ + + + + + ++ + + PN N A I+ +
Sbjct: 6 YIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEY-HIAPNGDIANQLNDAAAIETTWQ 64
Query: 444 QRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGL 503
+R++ + + + S+ E Q++++ + R + ++ + + G+
Sbjct: 65 RRVT--------PLATITNLTSGGFST-EIVHQVLNNPTARTNLVNNIYDLVSTRGYGGV 115
Query: 504 HFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY--SIAVG-ISGYKEILEVA 560
D+ AD+ F +++L+ Y +IAV +
Sbjct: 116 TIDFEQV----------SAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIPWLRG 165
Query: 561 YDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALKLIDELGGD 620
YD+ + V +M +M+YD+H A S PG P I ++
Sbjct: 166 YDYGGIGAVVNYMFIMAYDWHHAG-----------SEPGPVAPITEIRRTIEFTIA-QVP 213
Query: 621 KRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWT 680
RKI+IGVP YG + + PG ++ R +
Sbjct: 214 SRKIIIGVPLYGYDWII-----------PYQPGTVASA------ISNQNAIERAMRYQAP 256
Query: 681 VQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTV 740
+Q + + P + + +
Sbjct: 257 IQYSAEYQSP----------------------------------------FFRYSDQQGR 276
Query: 741 QRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKC 795
V +E S++ K++ ++ I AW + L + H+
Sbjct: 277 TH--------------EVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAEGHHHH 317
Score = 191 bits (486), Expect = 1e-53
Identities = 43/260 (16%), Positives = 89/260 (34%), Gaps = 61/260 (23%)
Query: 1348 NWAWYRPGKGKYVLKKVPWINILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFY--- 1404
+ + Y G + YV L + + + + I Y
Sbjct: 2 SLSNYIAGTLSF-------------YVLRNPDLDRELINDYA----PYSSSISIFEYHIA 44
Query: 1405 ------------ERVVTLKKKGV---KVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHV 1449
+ T ++ V + S +++N+ TAR + ++
Sbjct: 45 PNGDIANQLNDAAAIETTWQRRVTPLATITNLTSGGFS-TEIVHQVLNNPTARTNLVNNI 103
Query: 1450 VKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVS 1509
+ + G+ +D+E +D++ F F+R+L + G +L+ AV
Sbjct: 104 YDLVSTRGYGGVTIDFEQV----------SAADRDLFTGFLRQLRDRLQAGGYVLTIAVP 153
Query: 1510 P---SKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNAN 1566
YD + ++++ +M YD+H + G VAP+
Sbjct: 154 AKTSDNIPWLRGYDYGGIGAVVNYMFIMAYDWHHAGS-EPGPVAPIT----------EIR 202
Query: 1567 FTMNYWMKKGAPSRKLVMGV 1586
T+ + + PSRK+++GV
Sbjct: 203 RTIEFTI-AQVPSRKIIIGV 221
Score = 157 bits (400), Expect = 3e-42
Identities = 46/354 (12%), Positives = 107/354 (30%), Gaps = 69/354 (19%)
Query: 25 YRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYDVIKGGYKSFLGLKEANP 84
+ + P + + I+ Y + P + + +
Sbjct: 17 RNPDLDRELINDYAPYSSSISIFEYH--------IAPNGDIANQLNDAAAIETTWQRRVT 68
Query: 85 ELKVYLAV------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKDPALNDED 138
L + + ++ +R N ++++ ++ + G+ +
Sbjct: 69 PLATITNLTSGGFSTEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTI----------- 117
Query: 139 DDDLESIANE-RSDFSTFIQELSSTLRRNNYQLTLTSPGVIDRKTSLV---DISVVAPLV 194
D E ++ R F+ F+++L L+ Y LT+ P + D + +V
Sbjct: 118 --DFEQVSAADRDLFTGFLRQLRDRLQAGGYVLTIAVPAKTSDNIPWLRGYDYGGIGAVV 175
Query: 195 DLILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIG 254
+ + + +++ H E +A I + + +IIIG
Sbjct: 176 NYMFIMAYDWHHAGSE--------------PGPVAPITEIRRTI-EFTIAQVPSRKIIIG 220
Query: 255 IPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTW-RHFTDSN 313
+P +G + + PGT ++ + ++
Sbjct: 221 VPLYGYDWII-----------PYQPGTVAS------AISNQNAIERAMRYQAPIQYSAEY 263
Query: 314 GEPFMVKKDE-----WITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFC 362
PF D+ + +E S+ RKM +++ L W L L +
Sbjct: 264 QSPFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYRLQAIGAWQLTLAEGHHHH 317
Score = 73.2 bits (180), Expect = 1e-13
Identities = 12/124 (9%), Positives = 41/124 (33%), Gaps = 7/124 (5%)
Query: 2191 KVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFY 2250
+ + + + D + ++ + ++ + ++
Sbjct: 6 YIAGTLSFYVLRNPDLDRELINDYAPYSSSISIFEYHIAPNGDIANQLNDAAA------I 59
Query: 2251 EKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFA 2310
E + + I + S ++ +++N+ AR N V ++ + + G+ G+
Sbjct: 60 ETTWQRRVTPLATITNLTSGGFS-TEIVHQVLNNPTARTNLVNNIYDLVSTRGYGGVTID 118
Query: 2311 WEYP 2314
+E
Sbjct: 119 FEQV 122
Score = 67.8 bits (166), Expect = 1e-11
Identities = 7/75 (9%), Positives = 24/75 (32%), Gaps = 6/75 (8%)
Query: 2317 WQTCSTVKSHEWTVVRDSLGARGPYAY-----NGKLWLSYDDTRDIRRKCKSIKQDGLGG 2371
++ + + + P+ + ++ R + RK + +++ L
Sbjct: 244 QNAIERAMRYQAPIQYSA-EYQSPFFRYSDQQGRTHEVWFEGVRSMSRKMQIVREYRLQA 302
Query: 2372 AMVWSIDLDDFQNLC 2386
W + L + +
Sbjct: 303 IGAWQLTLAEGHHHH 317
Score = 45.8 bits (109), Expect = 1e-04
Identities = 5/34 (14%), Positives = 14/34 (41%)
Query: 863 NASTSILQVKFIKSNGYAGIMAWTIDLDDFHNKC 896
+ +++ ++ I AW + L + H+
Sbjct: 284 GVRSMSRKMQIVREYRLQAIGAWQLTLAEGHHHH 317
>3sim_A Protein, family 18 chitinase; family 18 plant chitinase, TIM barrel,
chitin binding, glyco hydrolase, hydrolase; 2.10A {Crocus
vernus}
Length = 275
Score = 268 bits (688), Expect = 1e-81
Identities = 53/287 (18%), Positives = 110/287 (38%), Gaps = 27/287 (9%)
Query: 1717 FTNWAWYRQ-SGGKYLPSDIDSDLCT-HVIYGFAVLDTDQLVIKP----HDTWADLDNKF 1770
F + Y SG K+ I+ + + FAV T + + D
Sbjct: 3 FVEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILG 62
Query: 1771 YEKVTALKKK--GVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGL 1828
++++A+K V+V +++GG + + + + S + + I +N DG+
Sbjct: 63 PDQISAIKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGI 122
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAYDI 1888
D+D+E+ +DK FA+ I L + ++ A++SP +V Y +
Sbjct: 123 DIDYEHF----------QNTDKNTFAECIGRLITTLKKNGVISFASISPFPSVD--EYYL 170
Query: 1889 PVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKK 1948
+ +E + I+ + Y + +D T + N + N + S G
Sbjct: 171 ALFNEYKNAINHINYQFKA-YDSSTSVDKFLGYYNNAASKYKGGN--VLISFSTGPHPGG 227
Query: 1949 VIFGMPMYGQSFTLADKNK-NGLNSQTYGGAEAG---ENTRARGFLA 1991
+ + + +L +K K +G+ T +++ A+ FL
Sbjct: 228 LPVDKGFFDAATSLKNKGKLHGIAVWTADTSKSSDFRYEEEAQAFLV 274
Score = 207 bits (528), Expect = 6e-60
Identities = 47/290 (16%), Positives = 94/290 (32%), Gaps = 32/290 (11%)
Query: 390 TNWSGSRKSDG-KFVPENIDYKLCT-HIVYAFASLDPNTLSIQAGN----PEADIDDNFY 443
+ G G KF I+ + V +FA + + N D
Sbjct: 4 VEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILGP 63
Query: 444 QRISSSPL-VTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAG 502
+IS+ + +H V++ +++GG + S Q S S + S+ ++R++ G
Sbjct: 64 DQISA--IKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDG 121
Query: 503 LHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISGYKEILEVAYD 562
+ D+ + DK F + I L K+ IS + + Y
Sbjct: 122 IDIDYEHF----------QNTDKNTFAECIGRLITTLKKNGVISFASISPFPSV--DEYY 169
Query: 563 FPALNDHVEFMSLMSYDYHGAWEGITGL-VSPLNSRPGEPYPNYNINTALKLIDELGGDK 621
N++ ++ ++Y + + + Y N+ + G
Sbjct: 170 LALFNEYKNAINHINYQFKAYDSSTSVDKFLGYYNNAASKYKGGNVLISF----STGPHP 225
Query: 622 RKIVIGVPFYGQSYTLK-LDKEHGLGA----ETDGPGLAGEYTQQPGMLA 666
+ + F+ + +LK K HG+ + E Q L
Sbjct: 226 GGLPVDKGFFDAATSLKNKGKLHGIAVWTADTSKSSDFRYEEEAQ-AFLV 274
Score = 196 bits (500), Expect = 3e-56
Identities = 42/249 (16%), Positives = 87/249 (34%), Gaps = 27/249 (10%)
Query: 1346 FTNWAWYRPGKGKYVLKKVPWINILKLYVTLQ------TGLGTDQEKENTFLKISELTYV 1399
F + Y G K + I Q +T K +
Sbjct: 3 FVEYIGYPLFSGV----KFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDS 58
Query: 1400 HILFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQ 1457
IL +++ +K V+V++++GG + + + + + + + + +Y
Sbjct: 59 SILGPDQISAIKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYN 118
Query: 1458 FDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQVINA 1517
DG+D+D+E+ ++DK +F + L K +G++ A++SP V
Sbjct: 119 LDGIDIDYEHF----------QNTDKNTFAECIGRLITTLKKNGVISFASISPFPSVDE- 167
Query: 1518 AYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKGA 1577
Y + +E + I+ + Y + +D T L + + Y N G
Sbjct: 168 -YYLALFNEYKNAINHINYQFKA-YDSSTSVDKFLGYYNNAASKYKGGNV--LISFSTGP 223
Query: 1578 PSRKLVMGV 1586
L +
Sbjct: 224 HPGGLPVDK 232
Score = 121 bits (305), Expect = 3e-30
Identities = 35/272 (12%), Positives = 82/272 (30%), Gaps = 33/272 (12%)
Query: 28 RPATFNVKNVIPQTCT-HVIYAYAAIDPVSRALIPED----LEYDVIKGGYKSFLGLKEA 82
F+ + P + ++A S + + +D G +K +
Sbjct: 13 SGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILGPDQISAIKSS 72
Query: 83 NPELKVYLAV-------KSNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKDPALN 135
+P ++V +++ + S N ++S+ + Y DG+D++ +
Sbjct: 73 HPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGIDIDYEHF--- 129
Query: 136 DEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVIDRKTSLVDISVVAPLVD 195
+++ F+ I L +TL++N + +++ +
Sbjct: 130 ---------QNTDKNTFAECIGRLITTLKKNGVISFASISP--FPSVDEYYLALFNEYKN 178
Query: 196 LILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGI 255
I ++ D V S N V G P + +
Sbjct: 179 AINHINYQF-KAYDSSTSVDKFLGYYNNAASKYKGGN-----VLISFSTGPHPGGLPVDK 232
Query: 256 PFFGKSYRLFNRSE-YGLGATVKGPGTEGKYT 286
FF + L N+ + +G+ +
Sbjct: 233 GFFDAATSLKNKGKLHGIAVWTADTSKSSDFR 264
Score = 109 bits (275), Expect = 3e-26
Identities = 23/127 (18%), Positives = 49/127 (38%), Gaps = 8/127 (6%)
Query: 2196 YTSWAYLRQAEG-KYSPEDIDGSLCT-HLVYAFADLDEQELVIRSHNNKL----DLEQGF 2249
+ + G K+S I+ + V +FA S N K D
Sbjct: 3 FVEYIGYPLFSGVKFSDVPINPHITKFQFVLSFAVDYTASSPHTSTNGKFNVFWDSSILG 62
Query: 2250 YEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGL 2307
++I+ K + ++V +++GG S + + + N V +T ++ Y +G+
Sbjct: 63 PDQISAIKSSHPNVRVAVSLGGASVGSNTVQFQAASVDSWVSNAVTSLTRIIQRYNLDGI 122
Query: 2308 EFAWEYP 2314
+ +E+
Sbjct: 123 DIDYEHF 129
>3n12_A Chitinase A, chinctu2; zinc atoms, complex, hydrolase; 1.20A
{Bacillus cereus} PDB: 3n11_A 3n15_A* 3n13_A* 3n17_A*
3n18_A* 3n1a_A*
Length = 333
Score = 225 bits (574), Expect = 2e-65
Identities = 66/369 (17%), Positives = 114/369 (30%), Gaps = 52/369 (14%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFY 1771
+V Y W + G D+ + F D+ ++ D F
Sbjct: 8 LLVGY---WHNFDNGTGIIKLKDVSPKW-DVINVSFGETGGDRSTVE-FSPVYGTDADFK 62
Query: 1772 EKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLD 1831
++ LK KG KV L+IGG N + A+ +FI + + I ++ FDG+D+D
Sbjct: 63 SDISYLKSKGKKVVLSIGGQNGVVL------LPDNAAKDRFINSIQSLIDKYGFDGIDID 116
Query: 1832 WEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN--PHDLLLSAAVSPSKAVIDNAYDIP 1889
E + +LI +R + D LLS A P A + Y
Sbjct: 117 LESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMA--PETAYVQGGYSAY 174
Query: 1890 VMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKV 1949
+G DK T ++ + NY+ A +
Sbjct: 175 -----GSIWGAYLPIIYGVKDKLT-YIHVQHYNAGSGIGMDGNNYNQGTADYEVAMADML 228
Query: 1950 IFGMPMYGQS---FTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKDGWVV 2006
+ G P+ G + F ++ + G A + G+++ E+
Sbjct: 229 LHGFPVGGNANNIFPALRSDQVMI-----GLPAAPAAAPSGGYISPTEMK-----KALNY 278
Query: 2007 VRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFCGCES 2066
+ G Y Y G M W+++ D NF +
Sbjct: 279 IIKGVPFGGKYKLSNQSG-----------------YPAFRGLMSWSINWDAKNNFEFSNN 321
Query: 2067 Y-PLLKTIN 2074
Y ++
Sbjct: 322 YRTYFDGLS 330
Score = 140 bits (355), Expect = 3e-36
Identities = 51/248 (20%), Positives = 83/248 (33%), Gaps = 27/248 (10%)
Query: 1341 KIVCYFTNWAWYRPGKGKYVLKKVPW-INILKLYVTLQTGLGTDQEKENTFLKISELTYV 1399
+V Y W + G G LK V +++ + G + E + ++
Sbjct: 8 LLVGY---WHNFDNGTGIIKLKDVSPKWDVINVSFGETGGDRSTVEFSPVYGTDAD---- 60
Query: 1400 HILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFD 1459
F + LK KG KV L+IGG N + + A+ RFI + + KY FD
Sbjct: 61 ---FKSDISYLKSKGKKVVLSIGGQNGVVL------LPDNAAKDRFINSIQSLIDKYGFD 111
Query: 1460 GLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG--LLLSAAVSPSKQVINA 1517
G+D+D E N + + + +G LLS A
Sbjct: 112 GIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMAPE-------T 164
Query: 1518 AYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKGA 1577
AY S +G DK T ++ + + N+ + A
Sbjct: 165 AYVQGGYSAYGSIWGAYLPIIYGVKDKLT-YIHVQHYNAGSGIGMDGNNYNQGTADYEVA 223
Query: 1578 PSRKLVMG 1585
+ L+ G
Sbjct: 224 MADMLLHG 231
Score = 126 bits (319), Expect = 1e-31
Identities = 50/300 (16%), Positives = 100/300 (33%), Gaps = 40/300 (13%)
Query: 381 PEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDD 440
+V Y N+ G +++ K I +F + +++ +P D
Sbjct: 5 GSKLLVGYWHNF---DNGTGIIKLKDVSPKW-DVINVSFGETGGDRSTVEF-SPVYGTDA 59
Query: 441 NFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDF 500
+F IS L + GK K++++IGG + + + +FI S+ + + ++ F
Sbjct: 60 DFKSDISY--LKSKGK-KVVLSIGGQNGVVL------LPDNAAKDRFINSIQSLIDKYGF 110
Query: 501 AGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISGYKEILEVA 560
G+ D + + + V LI ++ D G +L +A
Sbjct: 111 DGIDIDLESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDH---------YGPDFLLSMA 161
Query: 561 ----YDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPY---PNYNINTALKL 613
Y + + +G + +T + + NYN TA
Sbjct: 162 PETAYVQGGYSAYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMDGNNYNQGTA--- 218
Query: 614 IDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGL--AGEYTQQPGMLAYYEIC 671
D ++ G P G + + L ++ GL A G ++ E+
Sbjct: 219 -DYEVAMADMLLHGFPVGGNANNIF----PALRSDQVMIGLPAAPAAAPSGGYISPTEMK 273
Score = 99.6 bits (248), Expect = 3e-22
Identities = 52/380 (13%), Positives = 106/380 (27%), Gaps = 69/380 (18%)
Query: 8 SQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIPEDLEYD 67
+ +V Y + + +K+V P+ + ++ R+ + Y
Sbjct: 2 NNLGSKLLVGYWHN---FDNGTGIIKLKDVSPKW-DVINVSFGETGG-DRSTVEFSPVYG 56
Query: 68 VIKGGYKSFLGLKEANPELKVYLAVK-SNFVSITSDRESRLNFISSVLEMFDMYKFDGLD 126
LK KV L++ N V + D ++ FI+S+ + D Y FDG+D
Sbjct: 57 TDADFKSDISYLKSKG--KKVVLSIGGQNGVVLLPDNAAKDRFINSIQSLIDKYGFDGID 114
Query: 127 LNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLT------------S 174
++++ + +D + ++ I + + L+ S
Sbjct: 115 IDLESGIYLNGNDTNFKN--PTTPQIVNLISAIRTISDHYGPDFLLSMAPETAYVQGGYS 172
Query: 175 PGVIDRKTSLVDISVVAPLVDLILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNI 234
L I V + I ++ +N + +V +
Sbjct: 173 AYGSIWGAYLPIIYGVKDKLTYIHVQHYNAGSGIGMDGNNYNQGTADYEVAMADMLLHGF 232
Query: 235 ES-AVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMPGYLA 293
N I R +Q++IG+P A G GY++
Sbjct: 233 PVGGNANNIFPALRSDQVMIGLPAAP-------------AAAPSG-----------GYIS 268
Query: 294 FFEVCNKFKDKTWRHFTDSNGEPFMVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTL 353
E+ + + + + Y G M W++
Sbjct: 269 PTEMKKALNYIIK-----------------GVPFGGKYKLSNQSGYPA---FRGLMSWSI 308
Query: 354 DLDDFRG--FCGQKYPLLSA 371
+ D F
Sbjct: 309 NWDAKNNFEFSNNYRTYFDG 328
Score = 92.3 bits (229), Expect = 8e-20
Identities = 25/158 (15%), Positives = 57/158 (36%), Gaps = 13/158 (8%)
Query: 2191 KVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFY 2250
++ Y+ ++ G +D+ + +F + + + + F
Sbjct: 8 LLVGYWHNF---DNGTGIIKLKDVSPKW-DVINVSFGETGGDRSTV-EFSPVYGTDADFK 62
Query: 2251 EKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFA 2310
I+ +G +V+L+IGG + + D A+ F+ + ++ YGF+G++
Sbjct: 63 SDISYLKSKGKKVVLSIGGQNGVVL------LPDNAAKDRFINSIQSLIDKYGFDGIDID 116
Query: 2311 WEYPKCWQTCSTVKSHEWTVVRDSLGA--RGPYAYNGK 2346
E T + T +L + R + G
Sbjct: 117 LESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGP 154
Score = 46.9 bits (111), Expect = 6e-05
Identities = 32/237 (13%), Positives = 71/237 (29%), Gaps = 36/237 (15%)
Query: 584 WEGITGLVSPLNSRPGEPYPNY-NINTALK-LIDELGGD--------KRKIVIGVPFYGQ 633
E L + P N+ +A++ + D G D + G YG
Sbjct: 117 LESGIYLNGNDTNFKNPTTPQIVNLISAIRTISDHYGPDFLLSMAPETAYVQGGYSAYGS 176
Query: 634 SYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPRSM 693
+ L +G+ + + ++ + Y T + V L +
Sbjct: 177 IWGAYLPIIYGVKDKLTY--IHVQHYNAGSGIGMDGNNYNQGTADYEVAMADMLLHGFPV 234
Query: 694 GTLKLDKEHGLGAETDGPGL--AGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFT 751
G + L ++ GL A G ++ E+ +
Sbjct: 235 GGNANNIFPALRSDQVMIGLPAAPAAAPSGGYISPTEMKKALNYII-------------- 280
Query: 752 FQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTIDLDDFHNKCCMESF-PLLRAVN 807
+ V + L+ + + + G+M+W+I+ D +N ++ ++
Sbjct: 281 ----KGVPFGGKYKLSNQSGY---PAFRGLMSWSINWDAKNNFEFSNNYRTYFDGLS 330
Score = 43.0 bits (101), Expect = 0.001
Identities = 8/35 (22%), Positives = 12/35 (34%), Gaps = 1/35 (2%)
Query: 2367 DGLGGAMVWSIDLDDFQNLCSCGPY-PLLSAVNYE 2400
G M WSI+ D N Y ++ +
Sbjct: 298 PAFRGLMSWSINWDAKNNFEFSNNYRTYFDGLSLQ 332
Score = 36.5 bits (84), Expect = 0.090
Identities = 7/50 (14%), Positives = 16/50 (32%)
Query: 850 EQSAVFTLGLQQSNASTSILQVKFIKSNGYAGIMAWTIDLDDFHNKCCMD 899
E ++ + G+M+W+I+ D +N +
Sbjct: 271 EMKKALNYIIKGVPFGGKYKLSNQSGYPAFRGLMSWSINWDAKNNFEFSN 320
>1edt_A Endo-beta-N-acetylglucosaminidase H, endo H; hydrolase (glucosidase);
1.90A {Streptomyces plicatus} SCOP: c.1.8.5 PDB: 1c90_A
1c8x_A 1c91_A 1c3f_A 1c92_A 1c8y_A 1c93_A
Length = 271
Score = 207 bits (527), Expect = 5e-60
Identities = 51/280 (18%), Positives = 100/280 (35%), Gaps = 23/280 (8%)
Query: 1704 PPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPH--- 1760
P K V Y + GKY +D + + A ++ D +
Sbjct: 2 PAPVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHF 61
Query: 1761 --DTWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVN 1818
+ LDN ++ L+++G+KV L++ G + AG ++ SQQA S F + +
Sbjct: 62 NENVQRVLDNAV-TQIRPLQQQGIKVLLSVLGNHQGAG--FANFP-SQQAASAFAKQLSD 117
Query: 1819 FILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPS 1878
+ ++ DG+D D EY + + F L+ LRA P ++ + P+
Sbjct: 118 AVAKYGLDGVDFDDEYAEYGNNGT---AQPNDSSFVHLVTALRANM-PDKIISLYNIGPA 173
Query: 1879 KAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPN----DTTPTFNANY 1934
+ + +Y +S+ D+ Y+G W + P T
Sbjct: 174 ASRL--SYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVAD 228
Query: 1935 SLHYWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQT 1974
V G + + + ++ ++ + S+
Sbjct: 229 LARRTVDEGY-GVYLTYNLDGGDRTADVSAFTRELYGSEA 267
Score = 161 bits (409), Expect = 4e-44
Identities = 44/250 (17%), Positives = 85/250 (34%), Gaps = 22/250 (8%)
Query: 1334 SPLDQYFKIVCYFTNWAWYRPGKGKYVLKKV--PWINILKLYVTLQTGLGTDQEKENTFL 1391
+P+ Q V Y GKY L ++ ++ + D + +L
Sbjct: 3 APVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAA---NINYDTGTKTAYL 59
Query: 1392 KISE-LTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVV 1450
+E + V ++ L+++G+KV L++ G + G ++ S A F + +
Sbjct: 60 HFNENVQRVLDNAVTQIRPLQQQGIKVLLSVLGNHQGAG--FANFP-SQQAASAFAKQLS 116
Query: 1451 KFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSP 1510
+ KY DG+D D EY + + SF V L P ++ + P
Sbjct: 117 DAVAKYGLDGVDFDDEYAEY---GNNGTAQPNDSSFVHLVTALRANM-PDKIISLYNIGP 172
Query: 1511 SKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFF----YFNAN 1566
+ + +Y +S+ D+ Y+G W + P
Sbjct: 173 AASRL--SYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVA 227
Query: 1567 FTMNYWMKKG 1576
+ +G
Sbjct: 228 DLARRTVDEG 237
Score = 159 bits (403), Expect = 2e-43
Identities = 44/282 (15%), Positives = 98/282 (34%), Gaps = 28/282 (9%)
Query: 378 PEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEAD 437
P + P V YV + S + GK+ + V A+++ +T
Sbjct: 4 PVKQGPTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDT---GTKTAYLH 60
Query: 438 IDDNFYQRISSS-----PLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVL 492
++N + + ++ PL G +K+L+++ G +G ++ S F K +
Sbjct: 61 FNENVQRVLDNAVTQIRPLQQQG-IKVLLSVLGNHQGAG--FANFPSQ-QAASAFAKQLS 116
Query: 493 TFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISG 552
+ ++ G+ FD Y + + + +FV L+ L+A S+
Sbjct: 117 DAVAKYGLDGVDFDDEYAEYGNNGTA---QPNDSSFVHLVTALRANMPDKIISLYNIGPA 173
Query: 553 YKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRP-----GEPYPNYNI 607
+ +Y ++D ++ Y+G W+ + P G +
Sbjct: 174 ASRL---SYGGVDVSDKFDY---AWNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVA 227
Query: 608 NTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAET 649
+ A + +D G + + ++ + G+E
Sbjct: 228 DLARRTVD--EGYGVYLTYNLDGGDRTADVSAFTRELYGSEA 267
Score = 103 bits (258), Expect = 5e-24
Identities = 23/129 (17%), Positives = 50/129 (38%), Gaps = 7/129 (5%)
Query: 2190 YKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSH----NNKLDL 2245
+ Y GKY+ D G+ V A+++ ++ N +
Sbjct: 9 PTSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHFNENVQRV 68
Query: 2246 EQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFN 2305
+I ++GI+V+L++ G ++ + A F + +++ + YG +
Sbjct: 69 LDNAVTQIRPLQQQGIKVLLSVLGNHQ--GAGFANFPSQ-QAASAFAKQLSDAVAKYGLD 125
Query: 2306 GLEFAWEYP 2314
G++F EY
Sbjct: 126 GVDFDDEYA 134
Score = 85.0 bits (210), Expect = 8e-18
Identities = 32/244 (13%), Positives = 69/244 (28%), Gaps = 28/244 (11%)
Query: 14 QVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP----EDLEYDVI 69
V YVE + + + + + A I+ + + V+
Sbjct: 10 TSVAYVEVNNNSMLNVGKYTLADGGGNAFDVAVIFAANINYDTGTKTAYLHFNENVQRVL 69
Query: 70 KGGYKSFLGLKEANPELKVYLAV-----KSNFVSITSDRESRLNFISSVLEMFDMYKFDG 124
L+ +KV L+V + F + S ++ F + + Y DG
Sbjct: 70 DNAVTQIRPLQ--QQGIKVLLSVLGNHQGAGFANFPSQ-QAASAFAKQLSDAVAKYGLDG 126
Query: 125 LDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVIDRKTSL 184
+D + + + S F + L + + + ++L + G
Sbjct: 127 VDFDDEYAEYGNNGTA-----QPNDSSFVHLVTALRANM--PDKIISLYNIG-PAASRLS 178
Query: 185 VDISVVAPLVDLILLKSFNNDHMDDEVVPVKPNTKVNIQ---VTSTIANFNNIESAVYNW 241
V+ D N + VP K + V + + +
Sbjct: 179 YGGVDVSDKFDYA-----WNPYYGTWQVPGIALPKAQLSPAAVEIGRTSRSTVADLARRT 233
Query: 242 IKKG 245
+ +G
Sbjct: 234 VDEG 237
>3bxw_B Chitinase domain-containing protein 1; TIM barrel, lysosome,
secreted, hydrolase; 2.70A {Homo sapiens}
Length = 393
Score = 209 bits (532), Expect = 4e-59
Identities = 63/429 (14%), Positives = 128/429 (29%), Gaps = 66/429 (15%)
Query: 1642 ITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP 1701
TT + + K+ T + KP+ T +K + + K +
Sbjct: 15 SPVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLKAESVVLEHRSYCSAKARD 74
Query: 1702 VIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHD 1761
++ Y T W + Y + + T + + L +
Sbjct: 75 RHFAG-----DVLGYVTPW-----NSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFEVT 124
Query: 1762 TWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFIL 1821
D+D + V KG+ + + + + + + +++S+ + VV
Sbjct: 125 GLHDVDQGWMRAVRK-HAKGLHIVPRLLFEDWT-YDDFRNVLDSEDEIEELSKTVVQVAK 182
Query: 1822 EHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAV 1881
+FDG ++ + + G ++ L A + LL + P+
Sbjct: 183 NQHFDGFVVEVWNQ---------LLSQKRVGLIHMLTHLAEALHQARLLALLVIPPAITP 233
Query: 1882 IDN------AYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYS 1935
+ + ++ LD S+MTYDY G AP+
Sbjct: 234 GTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ--PGPNAPLS----------WVRAC 281
Query: 1936 LHYWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEI 1995
+ R K++ G+ YG + + AR +
Sbjct: 282 VQVLDPKSKWRSKILLGLNFYGMDYAT--------------------SKDAREPVVGARY 321
Query: 1996 CDKIQKDGWVVVRDRKRRIGPYAFK----GDQWVGFDDQAMIHHKAEFVKYNDLGGAMIW 2051
++ +V D + + +K G V + + + E + +G IW
Sbjct: 322 IQTLKDHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGV-SIW 380
Query: 2052 AL--DLDDF 2058
L LD F
Sbjct: 381 ELGQGLDYF 389
Score = 164 bits (415), Expect = 1e-43
Identities = 52/426 (12%), Positives = 117/426 (27%), Gaps = 114/426 (26%)
Query: 374 SNLQPEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGN 433
+ + V+ YVT W+ + + T I + L +
Sbjct: 70 AKARDRHFAGDVLGYVTPWNSHG-----YDVTKVFGSKFTQISPVWLQLKRRGREMFEVT 124
Query: 434 PEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLT 493
D+D + + + + + W + + + ++ S ++ K+V+
Sbjct: 125 GLHDVDQGWMRAVRKHAKGL--HIVPRLLFEDW---TYDDFRNVLDSEDEIEELSKTVVQ 179
Query: 494 FLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGI--- 550
+ F G + + + + ++ L + + I
Sbjct: 180 VAKNQHFDGFVVEVWNQL---------LSQKRVGLIHMLTHLAEALHQARLLALLVIPPA 230
Query: 551 ---SGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNI 607
+ + +F L ++ SLM+YDY A + G +PL +
Sbjct: 231 ITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ--PGPNAPL----------SWV 278
Query: 608 NTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAY 667
++++D + KI++G+ FYG Y +
Sbjct: 279 RACVQVLDPKSKWRSKILLGLNFYGMDYATS--------------------KDAREPVVG 318
Query: 668 YEICYRIKTRKWTVQRNTKSLEPRSMGTLKLDKEHGLGAETDGPGLAGEYTQQPGMLAYY 727
+K + + ++++ E ++
Sbjct: 319 ARYIQTLKDHRPRMVWDSQASEH-----------------------------------FF 343
Query: 728 EICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYAGIMAWTI- 786
E R V Y SL +++ + G G+ W +
Sbjct: 344 EYKKSRSGRHV-------------------VFYPTLKSLQVRLELARELG-VGVSIWELG 383
Query: 787 -DLDDF 791
LD F
Sbjct: 384 QGLDYF 389
Score = 143 bits (362), Expect = 1e-36
Identities = 49/327 (14%), Positives = 94/327 (28%), Gaps = 54/327 (16%)
Query: 1273 PTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWVWHPPTEPTTTHISVTE 1332
P T + + K + D G + H S
Sbjct: 16 PVHTTLSKSDAKKAASKTLLEKSQFSDKPVQDRGLVVTDLK------AESVVLEHRSYCS 69
Query: 1333 KSPLDQYF--KIVCYFTNWAWYRPGKGKYVLKKVPWINILKLYVTLQTGLGTDQEKENTF 1390
D++F ++ Y T W + K K I+ + L + +
Sbjct: 70 AKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGRE---------- 119
Query: 1391 LKISELTYVHILFYERVVTLKKKG----VKVSLAIGGWNDSLGGKYSRLVNSATARQRFI 1446
+ E+T +H + + ++K + L W + +++S +
Sbjct: 120 --MFEVTGLHDVDQGWMRAVRKHAKGLHIVPRLLFEDWTYDD---FRNVLDSEDEIEELS 174
Query: 1447 EHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSA 1506
+ VV+ FDG ++ + + L +A LL
Sbjct: 175 KTVVQVAKNQHFDGFVVEVWNQL---------LSQKRVGLIHMLTHLAEALHQARLLALL 225
Query: 1507 AVSPSKQVIN------AAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDF 1560
+ P+ + + L+ LD S+MTYDY G APL
Sbjct: 226 VIPPAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTYDYSTAHQ--PGPNAPLS------- 276
Query: 1561 FYFNANFTMNYWMKKGAPSRKLVMGVH 1587
+ K K+++G++
Sbjct: 277 ---WVRACVQVLDPKSKWRSKILLGLN 300
Score = 122 bits (306), Expect = 2e-29
Identities = 52/376 (13%), Positives = 115/376 (30%), Gaps = 68/376 (18%)
Query: 2 ENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP 61
E+ +Y S + + ++V V T + + + R +
Sbjct: 63 EHRSYCSAKARDRHFAGDVLGYVTPWNSHGYDVTKVFGSKFTQISPVWLQLKRRGREMFE 122
Query: 62 EDLEYDVIKGGYKSFLGLKEANPELKVYLAV------KSNFVSITSDRESRLNFISSVLE 115
+DV +G ++ +++ L + + +F ++ + +V++
Sbjct: 123 VTGLHDVDQGWMRA---VRKHAKGLHIVPRLLFEDWTYDDFRNVLDSEDEIEELSKTVVQ 179
Query: 116 MFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSP 175
+ FDG + V + L + +R + L+ L + L P
Sbjct: 180 VAKNQHFDGFVVEVWNQLL-----------SQKRVGLIHMLTHLAEALHQARLLALLVIP 228
Query: 176 GVIDRKTSLV------DISVVAPLVDLILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIA 229
I T + + +AP++D L ++ D +P A
Sbjct: 229 PAITPGTDQLGMFTHKEFEQLAPVLDGFSLMTY------DYSTAHQPGP---------NA 273
Query: 230 NFNNIESAVYNWIKKGARPEQIIIGIPFFGKSYRLFNRSEYGLGATVKGPGTEGKYTQMP 289
+ + + V K +I++G+ F+G Y K +
Sbjct: 274 PLSWVRACVQVLDPKSKWRSKILLGLNFYGMDYAT-----------SKDAREPVVGARYI 322
Query: 290 GYLAFFEVCNKFKDKTWRHFTDSNGEPFMVKKDE-----WITYENNDSIRRKMNYIKDRH 344
L + + E F K + Y S++ ++ ++
Sbjct: 323 QTLK--------DHRPRMVWDSQASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELG 374
Query: 345 LGGAMLWTL--DLDDF 358
+G ++ W L LD F
Sbjct: 375 VGVSI-WELGQGLDYF 389
Score = 70.5 bits (172), Expect = 2e-12
Identities = 19/141 (13%), Positives = 46/141 (32%), Gaps = 7/141 (4%)
Query: 2174 ESKQSNQQEQIRYAEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQE 2233
E + + V+ Y T W Y + GS T + + L +
Sbjct: 63 EHRSYCSAKARDRHFAGDVLGYVTPWN-----SHGYDVTKVFGSKFTQISPVWLQLKRRG 117
Query: 2234 LVIRSHNNKLDLEQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVR 2293
+ D++QG+ + K + +G+ ++ + + D + +++ +
Sbjct: 118 REMFEVTGLHDVDQGWMRAVRK-HAKGLHIVPRLLFEDWT-YDDFRNVLDSEDEIEELSK 175
Query: 2294 HVTEFLEFYGFNGLEFAWEYP 2314
V + + F+G
Sbjct: 176 TVVQVAKNQHFDGFVVEVWNQ 196
Score = 47.3 bits (112), Expect = 5e-05
Identities = 16/76 (21%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 2317 WQTCSTVKSHEWTVVRDSLGARGPYAY-----NGKLWLSYDDTRDIRRKCKSIKQDGLGG 2371
+ T+K H +V DS A + +G+ + Y + ++ + + ++ G+G
Sbjct: 319 ARYIQTLKDHRPRMVWDSQ-ASEHFFEYKKSRSGRHVVFYPTLKSLQVRLELARELGVGV 377
Query: 2372 AMVWSI--DLDDFQNL 2385
+W + LD F +L
Sbjct: 378 -SIWELGQGLDYFYDL 392
>2ebn_A Endo-beta-N-acetylglucosaminidase F1; hydrolase(glucosidase); 2.00A
{Elizabethkingia meningoseptica} SCOP: c.1.8.5
Length = 289
Score = 184 bits (469), Expect = 5e-52
Identities = 51/279 (18%), Positives = 89/279 (31%), Gaps = 20/279 (7%)
Query: 1703 IPPSTKDEFKIVCYF-TNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPH- 1760
+ +TK K+ + N + + L V+ A ++ D K
Sbjct: 2 VTGTTKANIKLFSFTEVNDTNPLN-NLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFV 60
Query: 1761 ---DTWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVV 1817
L + + L+ KG+KV L+I G +D +G + L S F +
Sbjct: 61 SNNPNVQHLLTNRAKYLKPLQDKGIKVILSILGNHDRSG--IANL--STARAKAFAQELK 116
Query: 1818 NFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSP 1877
N +N DG+ D EY A L E + A + L++ V
Sbjct: 117 NTCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAMP--NKLVTVYVYS 174
Query: 1878 SKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLH 1937
+ A D ++ +DY G +D T + L + ++
Sbjct: 175 RTSSFPTAVDGVNAG---SYVDYAIHDYGGSYDLATNYP----GLAKSGMVMSSQEFNQG 227
Query: 1938 YWVSHGADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYG 1976
+ + A R V G + F + N + Q
Sbjct: 228 RYATAQALRNIVTKGYGGHM-IFAMDPNRSNFTSGQLPA 265
Score = 156 bits (395), Expect = 4e-42
Identities = 42/249 (16%), Positives = 79/249 (31%), Gaps = 19/249 (7%)
Query: 1340 FKIVCYFTNWAWYRPGKGKYVLKKV--PWINILKLYVTLQTGLGTDQEKENTFLKISE-L 1396
K+ + + LK P ++++ L+ + D + F+ + +
Sbjct: 10 IKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSA---NINYDAANDKVFVSNNPNV 66
Query: 1397 TYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKY 1456
++ + + L+ KG+KV L+I G +D G + L S + F + + Y
Sbjct: 67 QHLLTNRAKYLKPLQDKGIKVILSILGNHDRSG--IANL--STARAKAFAQELKNTCDLY 122
Query: 1457 QFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQVIN 1516
DG+ D EY + E QA L++ V
Sbjct: 123 NLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAMPNK--LVTVYVYSRTSSFP 180
Query: 1517 AAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKG 1576
A D +D+ +DY G +D T + + F +
Sbjct: 181 TAVDGVNAGSYVDY---AIHDYGGSYDLATNYPGL----AKSGMVMSSQEFNQGRYATAQ 233
Query: 1577 APSRKLVMG 1585
A + G
Sbjct: 234 ALRNIVTKG 242
Score = 136 bits (343), Expect = 3e-35
Identities = 37/238 (15%), Positives = 76/238 (31%), Gaps = 16/238 (6%)
Query: 378 PEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQA----GN 433
+ K+ + + ++ F +N L +V A+++ + + +
Sbjct: 5 TTKANIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNP 64
Query: 434 PEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLT 493
+ N + + PL G +K++++I G D SG + L S + K F + +
Sbjct: 65 NVQHLLTNRAKYLK--PLQDKG-IKVILSILGNHDRSG--IANL--STARAKAFAQELKN 117
Query: 494 FLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISGY 553
++ G+ FD Y S +L E K ++ V
Sbjct: 118 TCDLYNLDGVFFDDEYSAYQTPPPSGFVTPSNNAAARLAYETKQAMPNKLVTVYVY--SR 175
Query: 554 KEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTAL 611
A D ++ +DY G+++ T S +N
Sbjct: 176 TSSFPTAVDGVNAGS---YVDYAIHDYGGSYDLATNYPGLAKSGMVMSSQEFNQGRYA 230
Score = 80.1 bits (197), Expect = 6e-16
Identities = 21/134 (15%), Positives = 49/134 (36%), Gaps = 8/134 (5%)
Query: 2189 PYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLD----EQELVIRSHNNKLD 2244
K+ + ++ ++ L +V A+++ ++ + ++ N
Sbjct: 9 NIKLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPNVQH 68
Query: 2245 LEQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGF 2304
L + + ++GI+VIL+I G D + L + F + + + Y
Sbjct: 69 LLTNRAKYLKPLQDKGIKVILSILGNHDRSG--IANLSTA--RAKAFAQELKNTCDLYNL 124
Query: 2305 NGLEFAWEYPKCWQ 2318
+G+ F EY
Sbjct: 125 DGVFFDDEYSAYQT 138
Score = 68.6 bits (167), Expect = 3e-12
Identities = 26/193 (13%), Positives = 59/193 (30%), Gaps = 19/193 (9%)
Query: 14 QVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALIP-----EDLEYDV 68
++ + E F +KN V+ A I+ + ++++ +
Sbjct: 11 KLFSFTEVNDTNPLNNLNFTLKNSGKPLVDMVVLFSANINYDAANDKVFVSNNPNVQH-L 69
Query: 69 IKGGYKSFLGLKEANPELKVYLAVK-----SNFVSITSDRESRLNFISSVLEMFDMYKFD 123
+ K L++ +KV L++ S ++++ F + D+Y D
Sbjct: 70 LTNRAKYLKPLQDKG--IKVILSILGNHDRSGIANLST--ARAKAFAQELKNTCDLYNLD 125
Query: 124 GLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVIDRKTS 183
G+ + + A + + E + N +T+ +
Sbjct: 126 GVFFDDEYSAYQTPPPSGFV--TPSNNAAARLAYETKQAM--PNKLVTVYVYSRTSSFPT 181
Query: 184 LVDISVVAPLVDL 196
VD VD
Sbjct: 182 AVDGVNAGSYVDY 194
>2y8v_A CHIC, class III chitinase, putative; afchic, hydrolase; 1.99A
{Aspergillus fumigatus}
Length = 290
Score = 173 bits (441), Expect = 3e-48
Identities = 55/264 (20%), Positives = 95/264 (35%), Gaps = 45/264 (17%)
Query: 1699 PKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIK 1758
P P +P + +++CY R LP ++ TH+I L+ D I
Sbjct: 2 PMPPVPGRPEH-RRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHIT 60
Query: 1759 PHDTWADLD--NKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHV 1816
+D D + N + +V LK+ GVKV +GG A Y L Q+ ++ +
Sbjct: 61 LNDDPPDHEMYNPLWAEVPVLKRSGVKVMGMLGGA---AQGSYRCLDGDQEKFERYYQPL 117
Query: 1817 VNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVS 1876
+ + H DGLDLD E G LI L+ ++ A V+
Sbjct: 118 LAMVRRHQLDGLDLDVEEE------------MSLPGIIRLIDRLKLDLGDDFIITLAPVA 165
Query: 1877 PSKAVIDN--AYDIPVMSEN----LDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTF 1930
+ I N +D + + + W + Y+ G + +
Sbjct: 166 AALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLA---------------EDPRMY 210
Query: 1931 NANYSLHYWVSHGADRKKVIFGMP 1954
A V+ G ++V++G+
Sbjct: 211 AA------IVAQGWSPQRVVYGLL 228
Score = 121 bits (306), Expect = 3e-30
Identities = 41/257 (15%), Positives = 80/257 (31%), Gaps = 47/257 (18%)
Query: 381 PEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGN--PEADI 438
+V+CY +R +P + THI+ A L+ + I + P+ ++
Sbjct: 11 EHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEM 70
Query: 439 DDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRF 498
+ + + L G K++ +GG S Y L +++ + +L +RR
Sbjct: 71 YNPLWAEVPV--LKRSGV-KVMGMLGGAAQGS---YRCLDGDQEKFERYYQPLLAMVRRH 124
Query: 499 DFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY----SIAVGISGYK 554
GL D + ++LI LK + +A + G
Sbjct: 125 QLDGLDLDVEEEM------------SLPGIIRLIDRLKLDLGDDFIITLAPVAAALLGIG 172
Query: 555 EILEVAY--DFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALK 612
+ Y + + + Y+ G E Y A
Sbjct: 173 NLSGFDYRQLEQQRGSKISWYNAQFYNGWGLAED---------------PRMYAAIVA-- 215
Query: 613 LIDELGGDKRKIVIGVP 629
G +++V G+
Sbjct: 216 ----QGWSPQRVVYGLL 228
Score = 121 bits (304), Expect = 5e-30
Identities = 42/264 (15%), Positives = 81/264 (30%), Gaps = 54/264 (20%)
Query: 1334 SPLDQYFKIVCYFTNWAWYRPGKGKYV-LKKVPW----INILKLYVTLQTGLGTDQEKEN 1388
++ +++CY R + L K I I ++ G
Sbjct: 7 PGRPEHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPG-------HI 59
Query: 1389 TFLKISELTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEH 1448
T ++ + V LK+ GVKV +GG G Y L +R+ +
Sbjct: 60 TLNDDPPDHEMYNPLWAEVPVLKRSGVKVMGMLGGAA---QGSYRCLDGDQEKFERYYQP 116
Query: 1449 VVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLL----L 1504
++ + ++Q DGLDLD E + L ++ +
Sbjct: 117 LLAMVRRHQLDGLDLDVEEEM------------SLPGIIRLIDRLKLDLGDDFIITLAPV 164
Query: 1505 SAAVSPSKQVINAAY--DVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFY 1562
+AA+ + Y + + W + Y+ G +D Y
Sbjct: 165 AAALLGIGNLSGFDYRQLEQQRGSKISWYNAQFYNGWGLA--------------EDPRMY 210
Query: 1563 FNANFTMNYWMKKGAPSRKLVMGV 1586
+ +G +++V G+
Sbjct: 211 -------AAIVAQGWSPQRVVYGL 227
Score = 105 bits (263), Expect = 1e-24
Identities = 24/128 (18%), Positives = 50/128 (39%), Gaps = 5/128 (3%)
Query: 2189 PYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQ- 2247
+VICY+ + R P + + TH++ A L+E I +++ D E
Sbjct: 12 HRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPDHEMY 71
Query: 2248 -GFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNG 2306
+ ++ G++V+ +GG + Y L D + + + + + +G
Sbjct: 72 NPLWAEVPVLKRSGVKVMGMLGGAAQG---SYRCLDGDQEKFERYYQPLLAMVRRHQLDG 128
Query: 2307 LEFAWEYP 2314
L+ E
Sbjct: 129 LDLDVEEE 136
Score = 70.0 bits (171), Expect = 1e-12
Identities = 38/258 (14%), Positives = 78/258 (30%), Gaps = 46/258 (17%)
Query: 8 SQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALI-----PE 62
+ +V+CY + R + TH+I A ++ + P+
Sbjct: 8 GRPEHRRVICYHQTLCPNRGDYVSVLPLVKNNTGVTHIIIAAFHLNEDPGHITLNDDPPD 67
Query: 63 DLEYDVIKGGYKSFLGLKEANPELKVYL----AVKSNFVSITSDRESRLNFISSVLEMFD 118
Y+ + LK + +KV A + ++ + D+E + +L M
Sbjct: 68 HEMYNPLWAEVPV---LKRSG--VKVMGMLGGAAQGSYRCLDGDQEKFERYYQPLLAMVR 122
Query: 119 MYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLTSPGVI 178
++ DGLDL D+E + I L L + +TL
Sbjct: 123 RHQLDGLDL-------------DVEEEMS-LPGIIRLIDRLKLDLGDDFI-ITLAPV--- 164
Query: 179 DRKTSLVDISVVAPLVDLILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAV 238
+ + D L+ + N Q + +
Sbjct: 165 ---AAALLGIGNLSGFDYRQLEQQRGSKISW----------YNAQFYNGWGLAED-PRMY 210
Query: 239 YNWIKKGARPEQIIIGIP 256
+ +G P++++ G+
Sbjct: 211 AAIVAQGWSPQRVVYGLL 228
>3ian_A Chitinase; structural genomics, hydrolase, glycosidase, PSI-2,
protein structure initiative; 1.75A {Lactococcus lactis
subsp}
Length = 321
Score = 139 bits (351), Expect = 6e-36
Identities = 55/381 (14%), Positives = 115/381 (30%), Gaps = 81/381 (21%)
Query: 1712 KIVCYFTNWA-----WYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADL 1766
+V Y+ NW Y+ + + F Q + +
Sbjct: 6 VLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQ-TLPTFKPYNKT 64
Query: 1767 DNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFD 1826
D +F +++ L +G V +A+GG + + S F+ ++ + + FD
Sbjct: 65 DTEFRAEISKLNAEGKSVLIALGGADAH----IEL---KKSQESDFVNEIIRLVDTYGFD 117
Query: 1827 GLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN--PHDLLLSAAVSPSKAVIDN 1884
GLD+D E D ++ +K+++ + + +++ A
Sbjct: 118 GLDIDLEQAAIEAAD-------NQTVIPSALKKVKDHYRKDGKNFMITMAPEFPYLTSSG 170
Query: 1885 AY--DIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSH 1942
Y I + D+I+ Y+ G + + ++ F
Sbjct: 171 KYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYG--------- 221
Query: 1943 GADRKKVIFGMPMYGQSFTLADKNKNGLNSQTYGGAEAGENTRARGFLAYYEICDKIQKD 2002
+ + T D S+ G + + A G Y + + ++
Sbjct: 222 ------------LTQRLVTGTDGFIKIPASKFVIGLPSNNDAAATG---YVKDPNAVK-- 264
Query: 2003 GWVVVRDRKRRIGPYAFKGDQWVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDDFKNFC 2062
A+ KA N++ G M W+++ D N
Sbjct: 265 ---------------------------NALNRLKA---SGNEIKGLMTWSVNWDAGTNSN 294
Query: 2063 GCE-SYPLLKTINRVLRNYPG 2082
G + + + T +L N G
Sbjct: 295 GEKYNNTFVNTYAPMLFNNEG 315
Score = 99.7 bits (248), Expect = 2e-22
Identities = 42/266 (15%), Positives = 85/266 (31%), Gaps = 42/266 (15%)
Query: 1341 KIVCYFTNWA-----WYRPGKGKY-----VLKKVPWINILKLYVTLQTGLGTDQEKENTF 1390
+V Y+ NW Y+ G + IN+ + L T + T
Sbjct: 6 VLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQTLPTFKPYNKTD 65
Query: 1391 LKISELTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVV 1450
+ F + L +G V +A+GG + + + F+ ++
Sbjct: 66 TE----------FRAEISKLNAEGKSVLIALGGADAHIEL-------KKSQESDFVNEII 108
Query: 1451 KFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHG--LLLSAAV 1508
+ + Y FDGLD+D E + ++++ ++ G +++ A
Sbjct: 109 RLVDTYGFDGLDIDLEQAAIEAADNQTV-------IPSALKKVKDHYRKDGKNFMITMAP 161
Query: 1509 SPSKQVINAAY--DVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNAN 1566
+ Y + L D+I+ Y+ G + + + D+ F
Sbjct: 162 EFPYLTSSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYG 221
Query: 1567 FTMN----YWMKKGAPSRKLVMGVHP 1588
T P+ K V+G+
Sbjct: 222 LTQRLVTGTDGFIKIPASKFVIGLPS 247
Score = 93.9 bits (233), Expect = 2e-20
Identities = 44/264 (16%), Positives = 82/264 (31%), Gaps = 31/264 (11%)
Query: 384 KVVCYVTNWSGSRK-----SDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADI 438
+V Y NW + K + + I +F P
Sbjct: 6 VLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQTLPTF-KPYNKT 64
Query: 439 DDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRF 498
D F IS L GK +LIA+GG S F+ ++ + +
Sbjct: 65 DTEFRAEISK--LNAEGK-SVLIALGGADAHIE-------LKKSQESDFVNEIIRLVDTY 114
Query: 499 DFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY----SIAVGISGYK 554
F GL D AD ++ ++++K + K ++A
Sbjct: 115 GFDGLDIDLEQAAIEAAD-------NQTVIPSALKKVKDHYRKDGKNFMITMAPEFPYLT 167
Query: 555 EILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALKLI 614
+ A L+ + +F++ Y+ G + L ++ E ++ +L+
Sbjct: 168 SSGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYGLTQRLV 227
Query: 615 DE----LGGDKRKIVIGVPFYGQS 634
+ K VIG+P +
Sbjct: 228 TGTDGFIKIPASKFVIGLPSNNDA 251
Score = 68.1 bits (166), Expect = 7e-12
Identities = 22/134 (16%), Positives = 44/134 (32%), Gaps = 15/134 (11%)
Query: 2191 KVICYYTSWA------YLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLD 2244
++ Y+ +W Y + + +F E + + +
Sbjct: 6 VLVGYWHNWKSTGKDGYKGGSSA-DFNLSSTQEGYNVINVSFMKTPEGQTLP-TFKPYNK 63
Query: 2245 LEQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGF 2304
+ F +I+K N G V++A+GG +FV + ++ YGF
Sbjct: 64 TDTEFRAEISKLNAEGKSVLIALGGADAH----IEL---KKSQESDFVNEIIRLVDTYGF 116
Query: 2305 NGLEFAWEYPKCWQ 2318
+GL+ E
Sbjct: 117 DGLDIDLEQAAIEA 130
Score = 56.2 bits (135), Expect = 6e-08
Identities = 30/258 (11%), Positives = 78/258 (30%), Gaps = 24/258 (9%)
Query: 10 STKHQVVCYVEAKSAYRHRPATFNVKNVIPQTC-----THVIYAYAAIDPVSRALIPEDL 64
S +V Y + + + ++ +P
Sbjct: 2 SLDKVLVGYWHNWKSTGKDGYKGGSSADFNLSSTQEGYNVINVSFMKTPEGQT--LPTFK 59
Query: 65 EYDVIKGGYKSFLG-LKEANPELKVYLAVKSNFVSITSDRESRLNFISSVLEMFDMYKFD 123
Y+ +++ + L V +A+ I + +F++ ++ + D Y FD
Sbjct: 60 PYNKTDTEFRAEISKLNAEG--KSVLIALGGADAHIELKKSQESDFVNEIIRLVDTYGFD 117
Query: 124 GLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNNYQLTLT----SPGVID 179
GLD++++ A+ D+ + + ++++ R++ +T P +
Sbjct: 118 GLDIDLEQAAIEAADNQTV---------IPSALKKVKDHYRKDGKNFMITMAPEFPYLTS 168
Query: 180 RKTSLVDISVVAPLVDLILLKSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVY 239
I+ + D I + +N + + + + V
Sbjct: 169 SGKYAPYINNLDSYYDFINPQYYNQGGDGFWDSDLNMWISQSNDEKKEDFLYGLTQRLVT 228
Query: 240 NWIK-KGARPEQIIIGIP 256
+ +IG+P
Sbjct: 229 GTDGFIKIPASKFVIGLP 246
>1nar_A Narbonin; plant SEED protein; 1.80A {Vicia narbonensis} SCOP: c.1.8.5
Length = 290
Score = 126 bits (317), Expect = 1e-31
Identities = 44/270 (16%), Positives = 95/270 (35%), Gaps = 37/270 (13%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSD-LCTHVIYGFAVLDTDQLVI---KPHDTWADLD 1767
I + + + I+++ L H I GFA+ + ++W D++
Sbjct: 3 PIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESW-DVE 61
Query: 1768 NKFYEKVTALKKK--GVKVTLAIGGWNDSAG---NKYSRLVNSQQARSKFIAHVVNFILE 1822
EKV LK++ VKV ++IGG + + + V++ + K I +
Sbjct: 62 LFGPEKVKNLKRRHPEVKVVISIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSG 121
Query: 1823 HNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVI 1882
+ DG+D+ +E+ + + FA L+ +L D L VS + +
Sbjct: 122 NLIDGIDIHYEHIR------------SDEPFATLMGQLITELKKDDDLNINVVSIAPSEN 169
Query: 1883 DNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSH 1942
++++ + + D+I+ + Y + Q + +A + +
Sbjct: 170 NSSHYQKLYNAKKDYINWVDYQFSNQQKPVSTD---------------DAFVEIFKSLEK 214
Query: 1943 GADRKKVIFGMPMYGQSFTLADKNKNGLNS 1972
KV+ G ++
Sbjct: 215 DYHPHKVLPGFSTDPLDTKHNKITRDIFIG 244
Score = 102 bits (255), Expect = 1e-23
Identities = 36/193 (18%), Positives = 64/193 (33%), Gaps = 38/193 (19%)
Query: 1402 LFYERVVTLKKK--GVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKY--- 1456
E+V LK++ VKV ++IGG + E + + KY
Sbjct: 63 FGPEKVKNLKRRHPEVKVVISIGGRGVN---TPFDPAEENVWVSNAKESLKLIIQKYSDD 119
Query: 1457 ---QFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQ 1513
DG+D+ +E+ E F + +L K L VS +
Sbjct: 120 SGNLIDGIDIHYEHI------------RSDEPFATLMGQLITELKKDDDLNINVVSIAPS 167
Query: 1514 VINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWM 1573
N+++ K + D+I+ + Y + Q + DD F + +Y
Sbjct: 168 ENNSSHYQKLYNAKKDYINWVDYQFSNQQKPVS---------TDDAFVEIFKSLEKDY-- 216
Query: 1574 KKGAPSRKLVMGV 1586
K++ G
Sbjct: 217 ----HPHKVLPGF 225
Score = 83.2 bits (205), Expect = 4e-17
Identities = 33/236 (13%), Positives = 72/236 (30%), Gaps = 33/236 (13%)
Query: 403 VPENI--DYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNFYQRISSSPLVT-HGKVKI 459
P I L H + FA G E D + L H +VK+
Sbjct: 21 FPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKV 80
Query: 460 LIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLT---FLRRFDFAGLHFDWNYPVCWQAD 516
+I+IGG ++ ++ SN K+ +K ++ G+ + +
Sbjct: 81 VISIGGRGVNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHI------ 134
Query: 517 CSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISGYKEILEVAYDFPALNDHVEFMSLM 576
+ + +LI ELK + D + +++ S ++ N ++++ +
Sbjct: 135 --RSDEPFATLMGQLITELKKDDDLNINVVSIAPSEN----NSSHYQKLYNAKKDYINWV 188
Query: 577 SYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALKLIDELGGDKRKIVIGVPFYG 632
Y + + ++ + K++ G
Sbjct: 189 DYQFSNQQKPVST--------DDAFVEIFKSLEK-------DYHPHKVLPGFSTDP 229
Score = 57.8 bits (139), Expect = 1e-08
Identities = 32/233 (13%), Positives = 72/233 (30%), Gaps = 50/233 (21%)
Query: 39 PQTCTHVIYAYA--AIDPVSRALIPEDLEYDVIKGGYKSFLGLKEANPELKVYLAV---- 92
H I +A + + + +DV G + LK +PE+KV +++
Sbjct: 29 ETLEFHYILGFAIESYYESGKGTGTFEESWDVELFGPEKVKNLKRRHPEVKVVISIGGRG 88
Query: 93 KSNFVSITSDRESRLNFISSVLEMFDMYK------FDGLDLNVKDPALNDEDDDDLESIA 146
+ + N S+ + Y DG+D++ +
Sbjct: 89 VNTPFDPAEENVWVSNAKESLKLIIQKYSDDSGNLIDGIDIHYEHI-------------- 134
Query: 147 NERSDFSTFIQELSSTLRRN---NYQLTLTSPGVIDRKTSLVDISVVAPLVDLILLKSFN 203
F+T + +L + L+++ N + +P + + ++ + + N
Sbjct: 135 RSDEPFATLMGQLITELKKDDDLNINVVSIAPSENNSSHYQKLYNAKKDYINWVDYQFSN 194
Query: 204 NDHMDDEVVPVKPNTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIP 256
ST F I + ++K P +++ G
Sbjct: 195 QQKP-----------------VSTDDAFVEI----FKSLEKDYHPHKVLPGFS 226
Score = 53.2 bits (127), Expect = 4e-07
Identities = 24/166 (14%), Positives = 51/166 (30%), Gaps = 18/166 (10%)
Query: 2189 PYKVICYYTSWAYLRQAEGKYSPEDI-DGSLCTHLVYAFADLDEQELVIRS--HNNKLDL 2245
P + Y + E I +L H + FA E + D+
Sbjct: 1 PKPIFREYIGVKPNSTTLHDFPTEIINTETLEFHYILGFAIESYYESGKGTGTFEESWDV 60
Query: 2246 EQGFYEKIT--KFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYG 2303
E EK+ K ++V+++IGG + + N + ++ Y
Sbjct: 61 ELFGPEKVKNLKRRHPEVKVVISIGGRGVN---TPFDPAEENVWVSNAKESLKLIIQKYS 117
Query: 2304 ------FNGLEFAWEYPKCWQTCSTVKSHEWTVVRDSLGARGPYAY 2343
+G++ +E+ + + +T+ + L
Sbjct: 118 DDSGNLIDGIDIHYEHIRSDEPFATL----MGQLITELKKDDDLNI 159
>3poh_A Endo-beta-N-acetylglucosaminidase F1; TIM barrel, structural
genomics, joint center for structural genomics, JCSG;
1.55A {Bacteroides thetaiotaomicron}
Length = 451
Score = 120 bits (300), Expect = 2e-28
Identities = 42/339 (12%), Positives = 84/339 (24%), Gaps = 20/339 (5%)
Query: 1636 EQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPT 1695
T + + T P+
Sbjct: 93 ANEGILTVNANTKSAEVEMTIRAGEGLQEDKTYAIPVAISDQSSDITIKDEDAKHCIYLV 152
Query: 1696 TVKPKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTD-- 1753
+ + +F + + + V+ A ++ D
Sbjct: 153 KDMRNAGDAYKGEGVMQGYLFFEVNDVNPLNTLSFQLENGKLLW-DVVVLFAANINYDAE 211
Query: 1754 --QLVIKPHDTWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSK 1811
+ ++ + L + + L+++GVKV L + G +D G ++L S+Q
Sbjct: 212 AGRPRVQCNPNVQYLLDNNETLLQPLRRRGVKVLLGLLGNHDITG--LAQL--SEQGAKD 267
Query: 1812 FIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLL 1871
F V + +N DG++ D EY + A L E + A P L+
Sbjct: 268 FAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM-PDKLVT 326
Query: 1872 SAAVSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTG----HVAPMYALPNDTT 1927
V D E +D + +Y + + N
Sbjct: 327 VFDWGQMYGV--ATVDGVDAKEWIDI---VVANYGSAAYPIGQMTKKQCSGISMEFNLGG 381
Query: 1928 PTFNANYSLHYWVSHGADRKKVIFGMPMYGQSFTLADKN 1966
+ + G + F +
Sbjct: 382 GGSLSASKAQSMIDGGY-GWFMGFAPSPAKYGSVFSRLQ 419
Score = 103 bits (258), Expect = 6e-23
Identities = 35/284 (12%), Positives = 76/284 (26%), Gaps = 18/284 (6%)
Query: 1266 VPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWVWHPPTEPTT 1325
K + + P + ++D + ++
Sbjct: 99 TVNANTKSAEVEMTIRAGEGLQEDKTYAIPVAISDQSSDITIKDEDAKHCIYLVKDMRNA 158
Query: 1326 THISVTEKSPLDQYFKIVCYFTNWAWYRPGKGKYVLKK-VPWINILKLYVTLQTGLGTDQ 1384
+ + +F + L+ +++ L+
Sbjct: 159 GDAY-----KGEGVMQGYLFFEVNDVNPLNTLSFQLENGKLLWDVVVLFAANINYDAEAG 213
Query: 1385 EKENTFLKISELTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQR 1444
+ + + L+++GVKV L + G +D G ++L S +
Sbjct: 214 RPRVQCNPNVQYLLDNN--ETLLQPLRRRGVKVLLGLLGNHDITG--LAQL--SEQGAKD 267
Query: 1445 FIEHVVKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLL 1504
F V ++ Y DG++ D EY ++ + + + E QA P L+
Sbjct: 268 FAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAM-PDKLVT 326
Query: 1505 SAAVSPSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGH 1548
V D E +D + +Y
Sbjct: 327 VFDWGQMYGVA--TVDGVDAKEWIDI---VVANYGSAAYPIGQM 365
Score = 82.3 bits (202), Expect = 5e-16
Identities = 37/250 (14%), Positives = 76/250 (30%), Gaps = 24/250 (9%)
Query: 378 PEEPEPKVVCYVTNWSGSRKSDGKFVPENIDYKLCTHIVYAFASL-----DPNTLSIQAG 432
E + + + + F EN KL +V FA+ + +Q
Sbjct: 163 KGEGVMQGYLFFEVNDVNPLNTLSFQLEN--GKLLWDVVVLFAANINYDAEAGRPRVQCN 220
Query: 433 NPEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVL 492
+ DN + + VK+L+ + G D +G +QL S K F + V
Sbjct: 221 PNVQYLLDNNETLLQP---LRRRGVKVLLGLLGNHDITG--LAQL--SEQGAKDFAREVA 273
Query: 493 TFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIAVGISG 552
+ + ++ G+++D Y +L E K ++
Sbjct: 274 QYCKAYNLDGVNYDDEYSNSPDLSNPSLTNPSTAAAARLCYETKQAMPDKLVTVFDWGQM 333
Query: 553 YKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGL----VSPLNSRPGEPYPNYNIN 608
Y D + ++ + +Y A I + S ++
Sbjct: 334 YGVA---TVDGVDAKEWIDI---VVANYGSAAYPIGQMTKKQCSGISMEFNLGGGGSLSA 387
Query: 609 TALKLIDELG 618
+ + + + G
Sbjct: 388 SKAQSMIDGG 397
Score = 55.3 bits (132), Expect = 2e-07
Identities = 27/226 (11%), Positives = 71/226 (31%), Gaps = 15/226 (6%)
Query: 2102 QTTGTQYE----EDETLSDDTIVIDSKSNRCNRTGELYQHEGDCAKFASCENGLIKIYDC 2157
+ T + + T +++ I+ + + + + + + +
Sbjct: 76 KAHNTDFALYPQDLVTFANEGILTVNANTKSAEVEMTIRAGEGLQEDKTYAIPVAISDQS 135
Query: 2158 PPGLHFNFVRAFYTHIESKQSNQQEQIRYAEPYKVICYYTSWAYLRQAEGKYSPEDIDGS 2217
+ ++ N + + + ++ + E+ G
Sbjct: 136 SDITIKDEDAKHCIYLVKDMRNAGDAYKGEGVMQGYLFFEVNDVNPLNTLSFQLEN--GK 193
Query: 2218 LCTHLVYAFA-----DLDEQELVIRSHNNKLDLEQGFYEKITKFNERGIQVILAIGGWSD 2272
L +V FA D + ++ + N L + RG++V+L + G D
Sbjct: 194 LLWDVVVLFAANINYDAEAGRPRVQCNPNVQYLLDNNETLLQPLRRRGVKVLLGLLGNHD 253
Query: 2273 SRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYPKCWQ 2318
++L ++F R V ++ + Y +G+ + EY
Sbjct: 254 I--TGLAQLSEQ--GAKDFAREVAQYCKAYNLDGVNYDDEYSNSPD 295
Score = 41.1 bits (95), Expect = 0.005
Identities = 13/102 (12%), Positives = 34/102 (33%), Gaps = 7/102 (6%)
Query: 94 SNFVSITSDRESRLNFISSVLEMFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFS 153
+ ++ + +F V + Y DG++ + + D + L + + +
Sbjct: 255 TGLAQLSE--QGAKDFAREVAQYCKAYNLDGVNYDDEYSNSPDLSNPSLTN--PSTAAAA 310
Query: 154 TFIQELSSTLRRNNYQLTLTSPGVIDRKTSLVDISVVAPLVD 195
E + + +T+ G + + VD +D
Sbjct: 311 RLCYETKQAMP--DKLVTVFDWGQMYGVAT-VDGVDAKEWID 349
>3ebv_A Chinitase A; chitinase A, CHIA, glycosidase, structural genomics,
unknown function, hydrolase, PSI-2, protein structure
initiative; 1.50A {Streptomyces coelicolor}
Length = 302
Score = 107 bits (268), Expect = 5e-25
Identities = 45/248 (18%), Positives = 80/248 (32%), Gaps = 34/248 (13%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLD---- 1767
+ Y+ N+ +G + FA T + + A L
Sbjct: 6 AVTGYWQNFN----NGATVQKISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGGYTV 61
Query: 1768 NKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDG 1827
++F V A + G KV +++GG + VNS + + F V + + E+ FDG
Sbjct: 62 DQFKADVRAKQAAGKKVIISVGGEKGTVS------VNSSASATNFANSVYSVMREYGFDG 115
Query: 1828 LDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVS-PSKAVIDNAY 1886
+D+D E + ++ L A P D++L+ A Y
Sbjct: 116 VDIDLENG------------LNPTYMTQALRALSAKAGP-DMILTMAPQTIDMQSTQGGY 162
Query: 1887 DIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADR 1946
D ++V+ Y+ G +YA + G
Sbjct: 163 -FQTALNVKDILTVVNMQYYNSGT-MLGCDGKVYA----QGTVDFLTALACIQLEGGLAP 216
Query: 1947 KKVIFGMP 1954
+V G+P
Sbjct: 217 SQVGLGLP 224
Score = 81.1 bits (200), Expect = 3e-16
Identities = 33/185 (17%), Positives = 61/185 (32%), Gaps = 30/185 (16%)
Query: 1405 ERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLD 1464
V + G KV +++GG G S VNS+ + F V + +Y FDG+D+D
Sbjct: 66 ADVRAKQAAGKKVIISVGGE----KGTVS--VNSSASATNFANSVYSVMREYGFDGVDID 119
Query: 1465 WEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVS---PSKQVINAAYDV 1521
E + +R L ++L+ A
Sbjct: 120 LENG------------LNPTYMTQALRALSAKA-GPDMILTMAPQTIDMQSTQGGYFQTA 166
Query: 1522 KALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKGAPSRK 1581
+ + L +++ Y+ G +Y DF A ++ G +
Sbjct: 167 LNVKDILTVVNMQYYNSGTML----GCDGKVYAQGTVDFLTALA----CIQLEGGLAPSQ 218
Query: 1582 LVMGV 1586
+ +G+
Sbjct: 219 VGLGL 223
Score = 76.1 bits (187), Expect = 1e-14
Identities = 35/255 (13%), Positives = 79/255 (30%), Gaps = 35/255 (13%)
Query: 384 KVVCYVTNWS-GSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGNPEADIDDNF 442
V Y N++ G+ VP D I AFA ++ A +
Sbjct: 6 AVTGYWQNFNNGATVQKISDVPSAYD-----IIAVAFADATTTPGAVTFNLDSAGLGGYT 60
Query: 443 YQRISSSPLVTHGK-VKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFA 501
+ + K++I++GG + ++S ++ F SV + +R + F
Sbjct: 61 VDQFKADVRAKQAAGKKVIISVGGEKGTVS------VNSSASATNFANSVYSVMREYGFD 114
Query: 502 GLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDY-SIAVGISGYKEILEVA 560
G+ D ++ + + ++ L A+ ++A +
Sbjct: 115 GVDIDL------------ENGLNPTYMTQALRALSAKAGPDMILTMAPQTIDMQSTQGGY 162
Query: 561 -YDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRPGEPYPNYNINTALKLIDELGG 619
+ D + +++ Y+ G G V + G
Sbjct: 163 FQTALNVKDILTVVNMQYYNSGTML-GCDGKVYAQGTVDFLTALACIQLEG-------GL 214
Query: 620 DKRKIVIGVPFYGQS 634
++ +G+P ++
Sbjct: 215 APSQVGLGLPASTRA 229
Score = 49.1 bits (117), Expect = 1e-05
Identities = 26/129 (20%), Positives = 43/129 (33%), Gaps = 16/129 (12%)
Query: 2191 KVICYYTSWAYLRQAEGKYSPEDIDGSLC-THLVYAFADLDEQELVIR----SHNNKLDL 2245
V Y+ ++ G + D + AFAD + S
Sbjct: 6 AVTGYWQNFN-----NGATVQKISDVPSAYDIIAVAFADATTTPGAVTFNLDSAGLGGYT 60
Query: 2246 EQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFN 2305
F + G +VI+++GG + S VN + NF V + YGF+
Sbjct: 61 VDQFKADVRAKQAAGKKVIISVGGEKGTVS------VNSSASATNFANSVYSVMREYGFD 114
Query: 2306 GLEFAWEYP 2314
G++ E
Sbjct: 115 GVDIDLENG 123
Score = 40.6 bits (95), Expect = 0.004
Identities = 32/160 (20%), Positives = 63/160 (39%), Gaps = 31/160 (19%)
Query: 101 SDRESRLNFISSVLEMFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELS 160
+ S NF +SV + Y FDG+D+ DLE+ N + + ++ LS
Sbjct: 92 NSSASATNFANSVYSVMREYGFDGVDI-------------DLENGLNP-TYMTQALRALS 137
Query: 161 STLRRNNYQLTLTSPGVID----RKTSLVDISVVAPLVDLILLKSFNNDHMDDEVVPVKP 216
+ + LT+ P ID + V ++ ++ ++ +N+ M
Sbjct: 138 AKAGP-DMILTMA-PQTIDMQSTQGGYFQTALNVKDILTVVNMQYYNSGTMLG------C 189
Query: 217 NTKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIP 256
+ KV Q + + + ++ G P Q+ +G+P
Sbjct: 190 DGKVYAQ-----GTVDFLTALACIQLEGGLAPSQVGLGLP 224
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel,
hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A*
3a4x_A* 3afb_A
Length = 311
Score = 94.0 bits (233), Expect = 2e-20
Identities = 37/235 (15%), Positives = 65/235 (27%), Gaps = 36/235 (15%)
Query: 1741 THVIYGFAVLDTDQLVIKPHDTWADL--DNKFYEKVTALKKKGVKVTLAIGGWNDSAGNK 1798
+ F + + WA KF ++V L++ G +V +A GG
Sbjct: 36 KYFTLAFILYSSV----YNGPAWAGSIPLEKFVDEVRELREIGGEVIIAFGGAVGPY--- 88
Query: 1799 YSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIK 1858
L + + I +N LD D E D AD +
Sbjct: 89 ---LCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAG------------IDADKLADALL 133
Query: 1859 ELRAAFNPHDLLLSAAVSPS------KAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKK 1912
++ + P +I+ V +D ++ MT DY+
Sbjct: 134 IVQRERPWVKFSFTLPSDPGIGLAGGYGIIETMAKKGV---RVDRVNPMTMDYYWTPSNA 190
Query: 1913 TGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKVIFGMPMYGQSFTLADKNK 1967
+ + + W G + G+ FTL D +
Sbjct: 191 ENAIKVAENVFRQLKQIYPEKSDEEIWKMIGLT---PMIGVNDDKSVFTLEDAQQ 242
Score = 79.3 bits (195), Expect = 1e-15
Identities = 26/147 (17%), Positives = 45/147 (30%), Gaps = 27/147 (18%)
Query: 1403 FYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLD 1462
F + V L++ G +V +A GG L A+ ++ E +K + Y LD
Sbjct: 63 FVDEVRELREIGGEVIIAFGGAVGP------YLCQQASTPEQLAEWYIKVIDTYNATYLD 116
Query: 1463 LDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPS------KQVIN 1516
D E DA + + + + P +I
Sbjct: 117 FDIEAGIDADKLADA------------LLIVQRERPWVKFSFTLPSDPGIGLAGGYGIIE 164
Query: 1517 AAYDVKALSESLDWISVMTYDYHGQWD 1543
+D ++ MT DY+
Sbjct: 165 TMAKKGV---RVDRVNPMTMDYYWTPS 188
Score = 60.5 bits (146), Expect = 2e-09
Identities = 21/187 (11%), Positives = 47/187 (25%), Gaps = 26/187 (13%)
Query: 413 THIVYAFASLDPNTLSIQAGNPEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGE 472
+ AF + F + L G +++IA GG
Sbjct: 36 KYFTLAFILYSSVYNGPAWAGSIPL--EKFVDEVRE--LREIGG-EVIIAFGGAVGP--- 87
Query: 473 KYSQLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLI 532
L S ++ + + + ++ L FD D +
Sbjct: 88 ---YLCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAG------------IDADKLADAL 132
Query: 533 QELKAEFDKHDYSIAVGISGY---KEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITG 589
++ E +S + + V+ ++ M+ DY+
Sbjct: 133 LIVQRERPWVKFSFTLPSDPGIGLAGGYGIIETMAKKGVRVDRVNPMTMDYYWTPSNAEN 192
Query: 590 LVSPLNS 596
+ +
Sbjct: 193 AIKVAEN 199
Score = 47.7 bits (113), Expect = 2e-05
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 6/68 (8%)
Query: 2247 QGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTEFLEFYGFNG 2306
+ F +++ + E G +VI+A GG L + ++ Y
Sbjct: 61 EKFVDEVRELREIGGEVIIAFGGAVG------PYLCQQASTPEQLAEWYIKVIDTYNATY 114
Query: 2307 LEFAWEYP 2314
L+F E
Sbjct: 115 LDFDIEAG 122
Score = 32.7 bits (74), Expect = 1.3
Identities = 9/58 (15%), Positives = 19/58 (32%)
Query: 99 ITSDRESRLNFISSVLEMFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFI 156
+ + +++ D Y LD +++ D+ D L + ER
Sbjct: 89 LCQQASTPEQLAEWYIKVIDTYNATYLDFDIEAGIDADKLADALLIVQRERPWVKFSF 146
>1dqc_A Tachycitin; disulfide-rich, antimicrobial protein; NMR {Tachypleus
tridentatus} SCOP: g.31.1.1
Length = 74
Score = 74.9 bits (184), Expect = 2e-16
Identities = 18/56 (32%), Positives = 24/56 (42%)
Query: 981 DSCTSGEYYPVDGECGSYYRCILGTLKKESCAPGLHWNKVNKICDWPKSAKCEDKS 1036
C C S+Y C + E+C GLH+N K+CDWP A C +
Sbjct: 10 SPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAGCTSVN 65
Score = 74.9 bits (184), Expect = 2e-16
Identities = 14/52 (26%), Positives = 22/52 (42%)
Query: 1137 TCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCS 1188
C++ + C SF C ++C L +NA K+CDW C+
Sbjct: 11 PCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAGCT 62
Score = 72.5 bits (178), Expect = 1e-15
Identities = 13/62 (20%), Positives = 24/62 (38%)
Query: 1200 PKDESCQEGEFAAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDWPYRTKCKQTSA 1259
+ C + C + C ++ +C GL++N +K CDWP + C +
Sbjct: 7 GRYSPCLDDGPNVNLYSCCSFYNCHKCLARLENCPKGLHYNAYLKVCDWPSKAGCTSVNK 66
Query: 1260 TT 1261
Sbjct: 67 EC 68
Score = 47.1 bits (112), Expect = 1e-06
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 1/37 (2%)
Query: 2128 CNRTGELYQHEGDCAKFASCENGLIKIYDCPPGLHFN 2164
C G + C F +C L ++ +CP GLH+N
Sbjct: 12 CLDDG-PNVNLYSCCSFYNCHKCLARLENCPKGLHYN 47
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 74.1 bits (181), Expect = 5e-13
Identities = 75/620 (12%), Positives = 163/620 (26%), Gaps = 170/620 (27%)
Query: 1764 ADLDNKFYEKVT--ALKKKGVKVTLAIGGWNDSAGNKYSRLVNS-QQARSKFIAHVVNFI 1820
+ D K + + L K+ + + A + RL + + + + V +
Sbjct: 31 DNFDCKDVQDMPKSILSKEEIDHIIMSK----DAVSGTLRLFWTLLSKQEEMVQKFVEEV 86
Query: 1821 LEHNFDGLDLDWEYPKCWQVDCKQGPA--------------SDKQGFA-------DLIKE 1859
L N+ + + + +Q P+ +D Q FA +
Sbjct: 87 LRINYK-----FLMSP-IKTEQRQ-PSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLK 139
Query: 1860 LRAAF---NPHDLL------------LSAAVSPSKAVIDNAYDIPVMSENLDWISVMTYD 1904
LR A P + ++ V S V M + W+++
Sbjct: 140 LRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCK------MDFKIFWLNL---- 189
Query: 1905 YHGQWDKKTGHVAPMYALPNDTTPTFNAN----YSLHYWVSHGADRKKVIFGMPMYGQSF 1960
+ + + L P + + ++ + + + Y
Sbjct: 190 --KNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCL 247
Query: 1961 -TLAD-KNKN-----GLNSQ---TYGGAEAGENTRARGFLAYYEICDKIQKDGWVVVRDR 2010
L + +N L+ + T TR + + D + +
Sbjct: 248 LVLLNVQNAKAWNAFNLSCKILLT---------TRFKQ------VTDFLSAATTTHISLD 292
Query: 2011 KRRIGPYAFKGDQ-------WVGFDDQAMIHHKAEFVKYNDLGGAMIWALDLDD---FKN 2060
+ D+ ++ Q + E + N ++I D + N
Sbjct: 293 HHSMT---LTPDEVKSLLLKYLDCRPQDL---PREVLTTNPRRLSIIAESIRDGLATWDN 346
Query: 2061 FCGCESYPLLKTINRVLRNYPGPGPNCFLKPVPPKH---------ED-NVP-QTTGTQYE 2109
+ L I L L+P + ++P +
Sbjct: 347 WKHVNCDKLTTIIESSLNV---------LEPAEYRKMFDRLSVFPPSAHIPTILLSLIWF 397
Query: 2110 EDETLSDDTIVIDSKSNRCNRTGELYQHEGDCAKFASCENGLIKIYDCPPGLHFNFVRAF 2169
+ +V N+ ++ + + + I I
Sbjct: 398 DVIKSDVMVVV-----NKLHKYSLVEKQP---------KESTISIPSI------------ 431
Query: 2170 YTHIESKQSNQQE-QIRYAEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFAD 2228
Y ++ K N+ + Y + + S P +D +H+ + +
Sbjct: 432 YLELKVKLENEYALHRSIVDHYNIPKTFDSD--------DLIPPYLDQYFYSHIGHHLKN 483
Query: 2229 LDEQELVIRSHNNKLDLEQGFYEKITKFNERGIQVILAIGGWSDSRSD--KYSRLVNDI- 2285
++ E + LD F E+ K A G ++ Y + D
Sbjct: 484 IEHPERMTLFRMVFLDF--RFLEQ--KIRHDSTA-WNASGSILNTLQQLKFYKPYICDND 538
Query: 2286 PARRNFVRHVTEFLEFYGFN 2305
P V + +FL N
Sbjct: 539 PKYERLVNAILDFLPKIEEN 558
Score = 62.2 bits (150), Expect = 2e-09
Identities = 89/641 (13%), Positives = 187/641 (29%), Gaps = 178/641 (27%)
Query: 47 YAYAAIDPVSRALIPEDLEYDVIKGGYKSFLG-------LKEANPELKVYLAVKSNFVSI 99
Y Y I V ++ + ++ KS L + + F ++
Sbjct: 16 YQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRL----FWTL 71
Query: 100 TSDRESRLN-FISSVLEMFDMYKF--DGLDLNVKDPALNDED-DDDLESIANERSDFSTF 155
S +E + F+ VL YKF + + P++ + + + N+ F+ +
Sbjct: 72 LSKQEEMVQKFVEEVLR--INYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKY 129
Query: 156 ---IQELSSTLRRNNYQLTLTSPGVIDR------KTSLV-----DISVVAPLVDLILLKS 201
+ LR+ +L + V+ KT + V + I +
Sbjct: 130 NVSRLQPYLKLRQALLELR-PAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLN 188
Query: 202 FNNDHMDDEVVPVKPN--TKVNIQVTSTIANFNNIESAVYNWIKKGARPEQIIIGIPFFG 259
N + + V+ + +++ TS + +NI+ + + I+ R
Sbjct: 189 LKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRI-HSIQAELR------------ 235
Query: 260 KSYRLFNRSEY--GLGATVKGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGEPF 317
RL Y L L V N K W F + + +
Sbjct: 236 ---RLLKSKPYENCL-------------------LVLLNVQNA---KAWNAF-NLSCKIL 269
Query: 318 MVKKDEWITYENNDSIRRKMNYIKDRHLGGAMLWTLDLDDFRGFCGQKYPLLSAVVSNLQ 377
+ + + +T + + + TL D+ + LL +
Sbjct: 270 LTTRFKQVT-DFLSAATTTHISLDH------HSMTLTPDEVKS-------LLLKYLDCRP 315
Query: 378 PEEPE------PKVVCYVTNWSGSRKSDGKFVPENIDY----KLCTHIVYAFASLDPNT- 426
+ P P+ + + DG +N + KL T I + L+P
Sbjct: 316 QDLPREVLTTNPRRLSII----AESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEY 371
Query: 427 ------LSIQAGNPEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISS 480
LS+ P I + L ++ W D ++
Sbjct: 372 RKMFDRLSVF---PP-SAH------IPTILLS------LI-----WFDVIKSDVMVVV-- 408
Query: 481 GSNRKKFIKSVLTFLRRFDFA----GLHFDWNYPVCWQADCSKQ-HKADKGNFVKLIQ-- 533
K K L + + ++ + + + + H+ ++
Sbjct: 409 ----NKLHKYSLVEKQPKESTISIPSIYLE----LKVKLENEYALHR-------SIVDHY 453
Query: 534 ELKAEFDKHDYSIAVGISGYKEILE-VAYDFPALNDHVEFMSLMS--Y-DYH-------- 581
+ FD D + Y + + + +H E M+L + D+
Sbjct: 454 NIPKTFDSDDLIPPY-LDQY--FYSHIGHHLKNI-EHPERMTLFRMVFLDFRFLEQKIRH 509
Query: 582 --GAWEGITGLVSPLNSRPGEPYPNY---NINTALKLIDEL 617
AW +++ L + Y Y N +L++ +
Sbjct: 510 DSTAWNASGSILNTLQQL--KFYKPYICDNDPKYERLVNAI 548
Score = 61.4 bits (148), Expect = 4e-09
Identities = 77/565 (13%), Positives = 144/565 (25%), Gaps = 173/565 (30%)
Query: 1 MENTAYFSQSTKHQVVCYVEAKSAYRHRPATFNVKNVIPQTCTHVIYAYAAIDPVSRALI 60
M + Y+E R R +N V + VSR
Sbjct: 95 MSPIKTEQRQPSMMTRMYIE----QRDR--LYNDNQVFAK------------YNVSR--- 133
Query: 61 PEDLEYDVIKGGYKSFLGLKEANPELKVYL-----AVKSNFVSIT---SDRESRLNF--- 109
+ Y ++ L E P V + + K+ + +++F
Sbjct: 134 LQ--PYLKLR------QALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIF 185
Query: 110 ---------ISSVLEMFDMYKFDGLDLNVK-DPALNDEDDDDLESIANERSDFSTFIQEL 159
+VLEM L + DP D +N + + EL
Sbjct: 186 WLNLKNCNSPETVLEML-------QKLLYQIDPNWTSRSD----HSSNIKLRIHSIQAEL 234
Query: 160 SSTLRRNNYQLTLTSPGVIDRKTSLV-DISVVAPLVDL---ILLKSFNNDHMDDEVVPVK 215
L+ Y+ L V+ V + +L ILL + D +
Sbjct: 235 RRLLKSKPYENCLL---VLLN----VQNAKAWNAF-NLSCKILLTTRFKQVTDF----LS 282
Query: 216 PNTKVNIQVTSTIANFNNIES----AVYNWIKKGARPEQIIIGIPF----FGKSYRLF-N 266
T +I + E Y + P +++ P +S R
Sbjct: 283 AATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 267 RSEYGLGATVKGPGTEGKYTQMPGYLAFFEVC-NKFKDKTWRH-FTDSNGEPFMV-KKDE 323
+ K+ E N + +R F V
Sbjct: 343 TWDNW------------KHVNCDKLTTIIESSLNVLEPAEYRKMFDR-----LSVFPPSA 385
Query: 324 WITYENNDSIRRKMNYIKDRHLGGAMLWT--------LDLDDF-------RGFCGQKYPL 368
I L +++W + ++ + +
Sbjct: 386 HIPTIL---------------L--SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI 428
Query: 369 LSAVVSNLQPEEPEP----KVV-CYVTNWSGSRKSDG-KFVPENID-YKLCTHIVYAFAS 421
S + E E +V Y + + D +P +D Y +HI + +
Sbjct: 429 PSIYLELKVKLENEYALHRSIVDHY----NIPKTFDSDDLIPPYLDQY-FYSHIGHHLKN 483
Query: 422 LDPNTLSIQAGNPEADIDDNFYQRISSSPLVTHGKVKILIAIGGWTDSSG--------EK 473
++ +D F ++ KI W S +
Sbjct: 484 IEHPERM--TLFRMVFLDFRFLEQ------------KIRHDSTAWNASGSILNTLQQLKF 529
Query: 474 YSQLISSGSNR-KKFIKSVLTFLRR 497
Y I + ++ + ++L FL +
Sbjct: 530 YKPYICDNDPKYERLVNAILDFLPK 554
Score = 59.9 bits (144), Expect = 1e-08
Identities = 107/680 (15%), Positives = 183/680 (26%), Gaps = 209/680 (30%)
Query: 855 FTLGLQQSNASTSILQV---KFIKSNGYAGIMAWTIDLD-----DFHNKCCMDKSRFRKI 906
F G + IL V F+ + D D K + K I
Sbjct: 9 FETG-EHQYQYKDILSVFEDAFVD------------NFDCKDVQDM-PKSILSKEEIDHI 54
Query: 907 EGEKAKCTGLYQI---------NSVNSFPNWNID-NRRFSKSRFRKIEGQKAKCTGLYQT 956
K +G ++ V F + N +F S + + Q + T +Y
Sbjct: 55 IMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIE 114
Query: 957 ------NSVNSFPNWNIDNRRFSIDSDTDS-DSCTSGEYYPVDGECGSYYRCILGTLKKE 1009
N F +N+ +R + + +DG GS G K
Sbjct: 115 QRDRLYNDNQVFAKYNV-SRLQPYLKLRQALLELRPAKNVLIDGVLGS------G---KT 164
Query: 1010 SCAPGLHWNKVNKICDWPKSAKCEDKSLHWNKVNKICDWPKSAKCEDKSLHWNKVNKICD 1069
A C + KI W C + K+
Sbjct: 165 WVA----------------LDVCLSYKVQCKMDFKIF-WLNLKNCNSPETVLEMLQKLL- 206
Query: 1070 WPKSAKCEDKNMETPMKSTTESQSQELELVEDELTTIRTQRPTRPA------TSSWW--- 1120
D N T + + + ++ EL + +P +
Sbjct: 207 -----YQIDPNW-TSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWN 260
Query: 1121 -------TPITT-----TESTQEEYIPETCVNGDYLP-DPDD----CRSFLICSHGNLLK 1163
+TT T+ ++ + PD+ +L C +L +
Sbjct: 261 AFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPR 320
Query: 1164 QSCG--P---SLLWNAKKK-LCDWSY--NVQCSFQSNIVRFS---LKPKDESCQEGEFAA 1212
+ P S++ + + L W +V C + I+ S L+P + +
Sbjct: 321 EVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSV 380
Query: 1213 YPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDWPYRTKCKQTSATTTSEQVPKP--- 1269
+P + I + S L W D +K+ K + S E+ PK
Sbjct: 381 FPPSAH-----I--PTILLS----LIWFDVIKSDVMVVVNKLHKYSLV---EKQPKESTI 426
Query: 1270 ----------TKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTE--WVW 1317
K + + YN P+ DS P + +
Sbjct: 427 SIPSIYLELKVKLENEYALHRSIVDHYNIPKT-----------FDSDDLIPPYLDQYFYS 475
Query: 1318 HPPTEPTTTHISVTEKSPLDQYFKIVCYFTNWAWYRPGKGKYVLKKVPWINILKLYVTLQ 1377
H H+ E F++V F ++ + + K W + TLQ
Sbjct: 476 H-----IGHHLKNIEHPERMTLFRMV--FLDFRFL---EQKIRHDSTAWNASGSILNTLQ 525
Query: 1378 TGLGTDQEKENTFLKISELTYVHILFYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVN 1437
LK FY+ + ND KY RLVN
Sbjct: 526 Q------------LK----------FYKPYICD--------------ND---PKYERLVN 546
Query: 1438 SATARQRFIEHVVKFLLKYQ 1457
+ ++ FL K +
Sbjct: 547 A----------ILDFLPKIE 556
Score = 56.0 bits (134), Expect = 2e-07
Identities = 80/615 (13%), Positives = 170/615 (27%), Gaps = 194/615 (31%)
Query: 679 WTVQRNTKSLEPRSMGTLKLDKEHG-----LGAETDGPGLAGE-YTQQ-------PGMLA 725
WT+ + + + + + L + + E P + Y +Q + A
Sbjct: 69 WTLLSKQEEMVQKFVEEV-LRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFA 127
Query: 726 YYEICYRIKTRKWTVQRNTKSLEPFTF--------QGDQWVSYEDPTSLTEKVKFIKSNG 777
Y + R++ +++ L P G WV+ + L+ KV+
Sbjct: 128 KYNVS-RLQP-YLKLRQALLELRPAKNVLIDGVLGSGKTWVALD--VCLSYKVQCKMDFK 183
Query: 778 YAGIMAWTIDLDDFHNKCCMESFPLLRAVNRAFGRLKDKKPSAPDCTRPTVSTPSPIGTS 837
+ W ++L K C +L + + ++ +R S+ +
Sbjct: 184 ----IFW-LNL-----KNCNSPETVLEMLQKLLYQI-----DPNWTSRSDHSSNIKLRIH 228
Query: 838 TTEDSVSSNWSLEQSAVFTLGLQQSNASTSILQVKFIKSNGYAGIMAWTIDLDD------ 891
+ + + + +KS Y + + L +
Sbjct: 229 SIQAELR---------------------------RLLKSKPYENCL---LVLLNVQNAKA 258
Query: 892 ---FHNKCCM-----DKSRFRKIEGEKAKCTGLYQINSVNSFPNWNIDNRRFSKSRFRKI 943
F+ C + K + I+ + D KS K
Sbjct: 259 WNAFNLSCKILLTTRFKQVTDFLSAATTT-----HISLDHHSMTLTPDE---VKSLLLKY 310
Query: 944 EGQKAK------CT---------GLYQTNSVNSFPNW-NIDNRRFSIDSDTDSDSCTSGE 987
+ + T + + ++ NW +++ + + ++ + E
Sbjct: 311 LDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAE 370
Query: 988 YYPVDGECGSYYRCILGTLKKESCAP----GLHWNKVNKICDWPKSAKCEDKSLHWNKVN 1043
Y + L + P L W V K K SL V
Sbjct: 371 YRK-------MFD-RLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL----VE 418
Query: 1044 KICDWPKSAKC--------------EDKSLH------WNKVNKICDWPKSAKCED----- 1078
K PK + + +LH +N D
Sbjct: 419 K---QPKESTISIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYS 475
Query: 1079 ------KNMETPMKSTTESQSQELELVEDELTTIR-TQRPTRPATSSWWTPITTTESTQ- 1130
KN+E + + L R ++ R +++W + + Q
Sbjct: 476 HIGHHLKNIE---------HPERMTLFRMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQ 526
Query: 1131 -EEYIPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSF 1189
+ Y Y+ D D L+ + + L + +L+ CS
Sbjct: 527 LKFY-------KPYICDNDPKYERLVNAILDFLPK-IEENLI---------------CSK 563
Query: 1190 QSNIVRFSLKPKDES 1204
++++R +L +DE+
Sbjct: 564 YTDLLRIALMAEDEA 578
Score = 48.7 bits (115), Expect = 3e-05
Identities = 65/508 (12%), Positives = 131/508 (25%), Gaps = 134/508 (26%)
Query: 1608 TTEEYK-----PTSEE----------SKPTTVSTSTVVTTEEPEQT-------EEPITTT 1645
+ EE + SK + V E +
Sbjct: 47 SKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS 106
Query: 1646 TTSTTTTTKRPK----PPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP 1701
+ +R + +R +P ++ ++P + + K
Sbjct: 107 MMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS--GKT 164
Query: 1702 VIPPSTKDEFKIVCYFTN---WAWYRQSGGKYLPSDIDSDLCTHVIYGFAVL-DTDQLVI 1757
+ +K+ C W + ++ L + + D +
Sbjct: 165 WVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIK 224
Query: 1758 KPHDTWADLDNKFYEKVTALKKKGVKVTLAI--GGWNDSAGNKY---SR-LVNSQQARSK 1811
+ + LK K + L + N A N + + L+ + R K
Sbjct: 225 LRIHSIQAELRRL------LKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTT---RFK 275
Query: 1812 FIAHVVN------FILEHNFDGLDLDWE----YPKCWQVDCKQGPASDKQG-------FA 1854
+ ++ L+H+ L D E K + P A
Sbjct: 276 QVTDFLSAATTTHISLDHHSMTLTPD-EVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIA 334
Query: 1855 DLIKELRAAFNPHDLL----LSAAVSPSKAVIDNA-----Y----------DIP--VMS- 1892
+ I++ A ++ + L+ + S V++ A + IP ++S
Sbjct: 335 ESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSL 394
Query: 1893 --ENLDWISVM-------------------TYDYHGQWDKKTGHVAPMYAL--------- 1922
++ VM T + + + YAL
Sbjct: 395 IWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN 454
Query: 1923 ------PNDTTPTFNANYSLHYWVSH--GADRKKVIFGMPMYGQSFT-LADK-NKNGLNS 1972
+D P + Y + H + + + M F L K +
Sbjct: 455 IPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDSTAW 514
Query: 1973 QTYGGAEAGENTRARGFLAYYE--ICDK 1998
G NT + L +Y+ ICD
Sbjct: 515 NASGSI---LNTLQQ--LKFYKPYICDN 537
Score = 42.9 bits (100), Expect = 0.002
Identities = 43/285 (15%), Positives = 87/285 (30%), Gaps = 77/285 (27%)
Query: 2170 YTHIESKQSNQQEQIR-----YAEPYK--VICYYTSWAYLRQAEGKYSPEDID-----GS 2217
+ H++ + Q Q + + + + C + S E+ID
Sbjct: 4 HHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQ-DMPKSI---LSKEEIDHIIMSKD 59
Query: 2218 LCTHLVYAFADLDEQ--ELVIRSHNNKLDLEQGFYEKITKFNERGIQVILAIGGWSDSRS 2275
+ + F L + E+V + L + F ++ Q + + + R
Sbjct: 60 AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFL--MSPIKTEQRQPSMMTRMYIEQRD 117
Query: 2276 DKYSRLVNDIP--ARRNFVRHVTEFLEFYGFNGLEFAWEYPKCWQTCSTVKSHEWTVVRD 2333
RL ND A+ N R L+ + + ++ + ++
Sbjct: 118 ----RLYNDNQVFAKYNVSR-------------LQPYLKLRQALLE---LRPAKNVLIDG 157
Query: 2334 SLGARGPYAYNGKLWLSYDDTRDIRRKCKSIKQDGLGGAMVW---------SIDLDDFQN 2384
LG+ GK W++ D + +CK + + W L+ Q
Sbjct: 158 VLGS-------GKTWVALDVCLSYKVQCK------MDFKIFWLNLKNCNSPETVLEMLQK 204
Query: 2385 LC-------------SCGPYPLLSAVNYELRNTTLNYEPKDCTLV 2416
L S + ++ ELR + ++C LV
Sbjct: 205 LLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV 249
Score = 40.2 bits (93), Expect = 0.011
Identities = 48/363 (13%), Positives = 102/363 (28%), Gaps = 117/363 (32%)
Query: 1314 EWVWHP-------PTEPTTTHISVTEK-----SPLDQYFKIVCYFTNWAWYRPGKGKYVL 1361
+++ P P+ T +I ++ +Y
Sbjct: 92 KFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYN--------------------- 130
Query: 1362 KKVPWINILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFYERVVTLKKKGVKVSLAI 1421
++ L+ Y+ L+ L + +N + GV
Sbjct: 131 -----VSRLQPYLKLRQALLELRPAKNVL--------ID-------------GV------ 158
Query: 1422 GGWNDSLGGKYSRLVNSATARQRFIEHVVKF------LLKYQFDGLDLDWEYPTCWQVNC 1475
G GK + + ++ + F L L+ +Q++
Sbjct: 159 LG-----SGK-TWVALDV-CLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 1476 D--AGPDSDK------ESFGLFVREL-HQAFKPHGLLLSAAVSPSKQVINAAYDV--KAL 1524
+ + D S +R L + LL+ V + + N A+++ K L
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKAWN-AFNLSCKIL 269
Query: 1525 -----SESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKGA-P 1578
+ D++S T + L + + P
Sbjct: 270 LTTRFKQVTDFLSAATTTHISLDHHSMT----LTPDEVKSLL---LKYL---DCRPQDLP 319
Query: 1579 SRKLVMGVHPL-LSTITEVLGHGPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQ 1637
V+ +P LS I E + G +T + +K + + T + +S + EP +
Sbjct: 320 RE--VLTTNPRRLSIIAESIRDGL-----ATWDNWKHVNCDKLTTIIESS--LNVLEPAE 370
Query: 1638 TEE 1640
+
Sbjct: 371 YRK 373
>1eok_A Endo-beta-N-acetylglucosaminidase F3; alpha/beta-barrel, hydrolase;
1.80A {Elizabethkingia meningoseptica} SCOP: c.1.8.5 PDB:
1eom_A*
Length = 290
Score = 61.5 bits (148), Expect = 9e-10
Identities = 35/242 (14%), Positives = 74/242 (30%), Gaps = 53/242 (21%)
Query: 1721 AWYRQSGGKY------LPSDID----SDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKF 1770
A+Y G +P +D L + L ++ ++ DLD
Sbjct: 13 AYYITDGRNPTFKLKDIPDKVDMVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLD--- 69
Query: 1771 YEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILE-HNFDGLD 1829
++ +L+ +G+KV I +K + + + + + +++ DG+
Sbjct: 70 -TQIRSLQSRGIKVLQNIDDDVSWQSSK----PGGFASAAAYGDAIKSIVIDKWKLDGIS 124
Query: 1830 LDWE--------------YPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAV 1875
LD E Y G + F ++I EL F A
Sbjct: 125 LDIEHSGAKPNPIPTFPGYAATGYNGWYSGSMAATPAFLNVISELTKYFGTT------AP 178
Query: 1876 SPSKAVIDNAYD-------IPVMSENLDWISVMTYDYH-------GQWDKKTGHVAPMYA 1921
+ + I + D + N ++I + +Y + + T +
Sbjct: 179 NNKQLQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPASKM 238
Query: 1922 LP 1923
+
Sbjct: 239 VF 240
Score = 54.5 bits (130), Expect = 1e-07
Identities = 35/233 (15%), Positives = 77/233 (33%), Gaps = 41/233 (17%)
Query: 1350 AWYRP--GKGKYVLKKVPW-INILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFYER 1406
A+Y + LK +P ++++ L+ L+ D K + + +
Sbjct: 13 AYYITDGRNPTFKLKDIPDKVDMVILF-GLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQ 71
Query: 1407 VVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWE 1466
+ +L+ +G+KV I + S+ A+A + K++ DG+ LD E
Sbjct: 72 IRSLQSRGIKVLQNIDDDV---SWQSSKPGGFASAAAYGDAIKSIVIDKWKLDGISLDIE 128
Query: 1467 --------------YPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSK 1512
Y +G + +F + EL + F A + +
Sbjct: 129 HSGAKPNPIPTFPGYAATGYNGWYSGSMAATPAFLNVISELTKYFGTT------APNNKQ 182
Query: 1513 QVINAAYD-------VKALSESLDWISVMTYDYH-------GQWDKKTGHVAP 1551
I + D ++ + ++I + +Y + + T +
Sbjct: 183 LQIASGIDVYAWNKIMENFRNNFNYIQLQSYGANVSRTQLMMNYATGTNKIPA 235
Score = 32.6 bits (73), Expect = 1.5
Identities = 14/106 (13%), Positives = 33/106 (31%), Gaps = 5/106 (4%)
Query: 2211 PEDIDGSLCTHLVYAFADLDEQELVIRSHNNKLDLEQGFYEKITKFNERGIQVILAIGGW 2270
P+ +D + L Y + + +I RGI+V+ I
Sbjct: 30 PDKVDMVILFGLKYWSLQDTTKLPGGTGMMGSFKSYKDLDTQIRSLQSRGIKVLQNIDDD 89
Query: 2271 SDSRSDKYSRLVNDIPARRNFVRHV-TEFLEFYGFNGLEFAWEYPK 2315
+S K + + + + ++ + +G+ E+
Sbjct: 90 VSWQSSK----PGGFASAAAYGDAIKSIVIDKWKLDGISLDIEHSG 131
>3mu7_A XAIP-II, xylanase and alpha-amylase inhibitor protein; TIM barell,
amylase/xylanase inhibitory protein, hydrolase I; 1.29A
{Scadoxus multiflorus} PDB: 3o9n_A 3oih_A* 3hu7_A 3m7s_A*
3d5h_A*
Length = 273
Score = 59.7 bits (144), Expect = 3e-09
Identities = 35/186 (18%), Positives = 60/186 (32%), Gaps = 14/186 (7%)
Query: 1722 WYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKKG 1781
W + + L + DS +VI GF + ++ + K
Sbjct: 9 WGQSFDERSLEATCDSGNYAYVIIGFLNTFGGGQTPALDISGHS-PKGLEPQIKHCQSKN 67
Query: 1782 VKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLD---LDWEYPKCW 1838
VKV L+IGG YS ++S+ + ++ L +
Sbjct: 68 VKVLLSIGG----PAGPYS--LDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAVLDGI 121
Query: 1839 QVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAYDIPVMSENLDWI 1898
+ G S Q A+++ R + + L+AA P D + S D I
Sbjct: 122 DFHIEHGGPSQYQLLANILSSFRLS--GSEFALTAA--PQCVYPDPNLGTVINSATFDAI 177
Query: 1899 SVMTYD 1904
V Y+
Sbjct: 178 WVQFYN 183
Score = 45.8 bits (108), Expect = 9e-05
Identities = 34/185 (18%), Positives = 57/185 (30%), Gaps = 32/185 (17%)
Query: 1407 VVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLD---L 1463
+ + K VKV L+IGG G YS ++S ++ K L +
Sbjct: 60 IKHCQSKNVKVLLSIGGP----AGPYS--LDSRNDANDLAVYLHKNFLLPPAGTSESRPF 113
Query: 1464 DWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQVINAAYDVKA 1523
+ + G S + + + L+AA P +
Sbjct: 114 GNAVLDGIDFHIEHGGPSQYQLLANILSSFRLSGS--EFALTAA--PQCVYPDPNLGTVI 169
Query: 1524 LSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMK--KGAPSRK 1581
S + D I V Y+ P + NA+ MN W + A + K
Sbjct: 170 NSATFDAIWVQFYNN-----------------PQCSYSASNASALMNAWKEWSMKARTDK 212
Query: 1582 LVMGV 1586
+ +G
Sbjct: 213 VFLGF 217
Score = 30.8 bits (69), Expect = 5.8
Identities = 14/106 (13%), Positives = 30/106 (28%), Gaps = 13/106 (12%)
Query: 413 THIVYAFASLDPNTLSIQAGNPEADIDDNFYQRISSSPLVTHGK-VKILIAIGGW----- 466
+++ F + P DI + + + K VK+L++IGG
Sbjct: 28 AYVIIGFLNTFGG-----GQTPALDISGHSPKGLEPQIKHCQSKNVKVLLSIGGPAGPYS 82
Query: 467 --TDSSGEKYSQLISSGSNRKKFIKSVLTFLRRFDFAGLHFDWNYP 510
+ + + + S G+ F +
Sbjct: 83 LDSRNDANDLAVYLHKNFLLPPAGTSESRPFGNAVLDGIDFHIEHG 128
>2uy2_A Endochitinase; carbohydrate metabolism, polysaccharide degradation,
glycopr chitin-binding, chitin degradation, CAZY,
hydrolase; 1.60A {Saccharomyces cerevisiae} PDB: 2uy3_A*
2uy4_A* 2uy5_A*
Length = 294
Score = 59.3 bits (143), Expect = 5e-09
Identities = 29/216 (13%), Positives = 63/216 (29%), Gaps = 39/216 (18%)
Query: 1712 KIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDN--- 1768
I Y+ + Q + L + +S + F + + +
Sbjct: 7 NIAVYWGQNSAGTQ---ESLATYCESSDADIFLLSFLNQFPTLGLNFANACSDTFSDGLL 63
Query: 1769 ---KFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFIL---- 1821
+ E + + G KV L++GG + S + F + +
Sbjct: 64 HCTQIAEDIETCQSLGKKVLLSLGGASGSYL------FSDDSQAETFAQTLWDTFGEGTG 117
Query: 1822 -------EHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAA 1874
DG D D E ++ G++ L +LR F +
Sbjct: 118 ASERPFDSAVVDGFDFDIENN-------------NEVGYSALATKLRTLFAEGTKQYYLS 164
Query: 1875 VSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQWD 1910
+P D + + + ++D+ + Y+ +
Sbjct: 165 AAPQCPYPDASVGDLLENADIDFAFIQFYNNYCSVS 200
Score = 45.8 bits (108), Expect = 9e-05
Identities = 22/152 (14%), Positives = 45/152 (29%), Gaps = 30/152 (19%)
Query: 1403 FYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHV-----------VK 1451
E + T + G KV L++GG G Y + + + F + + +
Sbjct: 68 IAEDIETCQSLGKKVLLSLGGA----SGSYL--FSDDSQAETFAQTLWDTFGEGTGASER 121
Query: 1452 FLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPS 1511
DG D D E + + +L F + +P
Sbjct: 122 PFDSAVVDGFDFDIENNN-------------EVGYSALATKLRTLFAEGTKQYYLSAAPQ 168
Query: 1512 KQVINAAYDVKALSESLDWISVMTYDYHGQWD 1543
+A+ + +D+ + Y+ +
Sbjct: 169 CPYPDASVGDLLENADIDFAFIQFYNNYCSVS 200
Score = 32.0 bits (72), Expect = 2.2
Identities = 36/223 (16%), Positives = 71/223 (31%), Gaps = 33/223 (14%)
Query: 413 THIVYAFASLDPNTLSIQAGNPEADIDDNFYQRISSSPLVTHGK---VKILIAIGGWTDS 469
+ +F + P A D + + + K+L+++GG + S
Sbjct: 33 DIFLLSFLNQFPTLGLNFANACSDTFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGS 92
Query: 470 SGEKYSQLISSGSNRKKFIKSVL-TFLRRFDFAGLHFDWNYPVCWQADCSKQHKADKGNF 528
S S + F +++ TF + FD + D ++
Sbjct: 93 YL------FSDDSQAETFAQTLWDTFGEGTGASERPFDSAVVDGFDFDIENNNEVGYSAL 146
Query: 529 VKLIQELKAEFDKHDYSIAVGISGYKEILEVAYDFPAL-NDHVEFMSLMSYDYHGAWEGI 587
++ L AE K Y A Y + A L N ++F + Y+ + +
Sbjct: 147 ATKLRTLFAEGTKQYYLSAAPQCPYPD----ASVGDLLENADIDFAFIQFYNNYCSV--- 199
Query: 588 TGLVSPLNSRPGEPYPNYNINTALKLIDELGGDKR-KIVIGVP 629
+N +T L + +K K+ +G+P
Sbjct: 200 --------------SGQFNWDTWLTYAQTVSPNKNIKLFLGLP 228
Score = 30.4 bits (68), Expect = 7.6
Identities = 15/88 (17%), Positives = 29/88 (32%), Gaps = 17/88 (19%)
Query: 2238 SHNNKLDLEQGFYEKITKFNERGIQVILAIGGWSDSRSDKYSRLVNDIPARRNFVRHVTE 2297
+ ++ L E I G +V+L++GG S S +D F + + +
Sbjct: 57 TFSDGLLHCTQIAEDIETCQSLGKKVLLSLGGASGSYL------FSDDSQAETFAQTLWD 110
Query: 2298 -----------FLEFYGFNGLEFAWEYP 2314
+ +G +F E
Sbjct: 111 TFGEGTGASERPFDSAVVDGFDFDIENN 138
>2hvm_A Hevamine; hydrolase, chitinase/lysozyme; 1.80A {Hevea brasiliensis}
SCOP: c.1.8.5 PDB: 1hvq_A* 1llo_A 1kr0_A* 1kr1_A* 1kqy_A*
1kqz_A*
Length = 273
Score = 58.2 bits (140), Expect = 8e-09
Identities = 39/228 (17%), Positives = 75/228 (32%), Gaps = 38/228 (16%)
Query: 1722 WYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTD----QLVIKPHDTWADLD-NKFYEKVTA 1776
W + L + ++V F + Q+ + H A + +
Sbjct: 7 WGQNGNEGTLTQTCSTRKYSYVNIAFLNKFGNGQTPQINLAGHCNPAAGGCTIVSNGIRS 66
Query: 1777 LKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFIL----------EHNFD 1826
+ +G+KV L++GG Y+ + SQ ++ N L + D
Sbjct: 67 CQIQGIKVMLSLGG----GIGSYT--LASQADAKNVADYLWNNFLGGKSSSRPLGDAVLD 120
Query: 1827 GLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAY 1886
G+D D E+ + DL + L A + A +P D
Sbjct: 121 GIDFDIEHG-------------STLYWDDLARYLSAYSKQGKKVYLTA-APQCPFPDRYL 166
Query: 1887 DIPVMSENLDWISVMTY-DYHGQWDKKTGHVAPMYALPNDTTPTFNAN 1933
+ + D++ V Y + Q+ +G++ + N T + NA
Sbjct: 167 GTALNTGLFDYVWVQFYNNPPCQYS--SGNINNIINSWNRWTTSINAG 212
Score = 44.3 bits (104), Expect = 2e-04
Identities = 30/196 (15%), Positives = 62/196 (31%), Gaps = 49/196 (25%)
Query: 1403 FYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLL-------- 1454
+ + + +G+KV L++GG G Y+ + S + +++ L
Sbjct: 60 VSNGIRSCQIQGIKVMLSLGGG----IGSYT--LASQADAKNVADYLWNNFLGGKSSSRP 113
Query: 1455 --KYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSK 1512
DG+D D E+ + + R L A+ G + +P
Sbjct: 114 LGDAVLDGIDFDIEHGS-------------TLYWDDLARYL-SAYSKQGKKVYLTAAPQC 159
Query: 1513 QVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYW 1572
+ + D++ V Y+ P + N N +N W
Sbjct: 160 PFPDRYLGTALNTGLFDYVWVQFYNN-----------------PPCQYSSGNINNIINSW 202
Query: 1573 MK--KGAPSRKLVMGV 1586
+ + K+ +G+
Sbjct: 203 NRWTTSINAGKIFLGL 218
>1ta3_A XIP-1, xylanase inhibitor protein I; beta alpha barrel (XIP-I), beta
alpha barrel (xylanase), HYD inhibitor-hydrolase complex;
HET: NAG; 1.70A {Triticum aestivum} SCOP: c.1.8.5 PDB:
1om0_A* 1te1_A*
Length = 274
Score = 55.0 bits (132), Expect = 1e-07
Identities = 38/250 (15%), Positives = 66/250 (26%), Gaps = 56/250 (22%)
Query: 1722 WYRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKKG 1781
W R L DS + T V F + + D + + + KG
Sbjct: 12 WGRNKAEGSLREACDSGMYTMVTMSFLDVFGANGKYHLDLSGHD-LSSVGADIKHCQSKG 70
Query: 1782 VKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILE------------HNFDGLD 1829
V V+L+IGG+ + S ++ H+ N DG+D
Sbjct: 71 VPVSLSIGGYGTGYS------LPSNRSALDLFDHLWNSYFGGSKPSVPRPFGDAWLDGVD 124
Query: 1830 LDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHD----LLLSAAVSPSKAVIDNA 1885
L E+ + + L EL L L+A A
Sbjct: 125 LFLEHG------------TPADRYDVLALELAKHNIRGGPGKPLHLTAT--VRCGYPPAA 170
Query: 1886 YDIPVMSENL-DWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGA 1944
+ ++ + + + V TY+ S W +
Sbjct: 171 HVGRALATGIFERVHVRTYES-----------------DKWCNQNLGWEGSWDKWTA-AY 212
Query: 1945 DRKKVIFGMP 1954
+ G+
Sbjct: 213 PATRFYVGLT 222
Score = 45.0 bits (106), Expect = 1e-04
Identities = 34/197 (17%), Positives = 64/197 (32%), Gaps = 55/197 (27%)
Query: 1407 VVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLL------------ 1454
+ + KGV VSL+IGG+ G YS + S + +H+
Sbjct: 63 IKHCQSKGVPVSLSIGGY----GTGYS--LPSNRSALDLFDHLWNSYFGGSKPSVPRPFG 116
Query: 1455 KYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVREL----HQAFKPHGLLLSAAVSP 1510
DG+DL E+ + + + + EL + L L+A
Sbjct: 117 DAWLDGVDLFLEHG------------TPADRYDVLALELAKHNIRGGPGKPLHLTAT--V 162
Query: 1511 SKQVINAAYDVKALSESL-DWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTM 1569
AA+ +AL+ + + + V TY+ + +
Sbjct: 163 RCGYPPAAHVGRALATGIFERVHVRTYESDKWCN-----------------QNLGWEGSW 205
Query: 1570 NYWMKKGAPSRKLVMGV 1586
+ W P+ + +G+
Sbjct: 206 DKWT-AAYPATRFYVGL 221
>2grx_C Protein TONB; beta barrel, outer membrane, heterocomplex,
inter-protein beta sheet, protein-protein, metal
transport; HET: GCN KDO GMH FTT DAO MYR FCI; 3.30A
{Escherichia coli} SCOP: d.212.1.2 PDB: 1xx3_A
Length = 229
Score = 51.6 bits (123), Expect = 7e-07
Identities = 21/101 (20%), Positives = 29/101 (28%)
Query: 1607 STTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTT 1666
S + + + + +S V+ P Q T PP
Sbjct: 3 SHHHHHHSSGLVPRGSHMSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPE 62
Query: 1667 TRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
P+PI + V KP KPKP VK P
Sbjct: 63 PEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRD 103
Score = 47.0 bits (111), Expect = 2e-05
Identities = 24/108 (22%), Positives = 39/108 (36%), Gaps = 2/108 (1%)
Query: 1601 PGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPT 1660
P G++ S + + ++P +V+ T E P+ + P P+PP
Sbjct: 15 PRGSHMSVHQVIEL-PAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPK 73
Query: 1661 TTSTTTTRPKPITTIKPKPTT-VKPKPTTTVKPKPTTVKPKPVIPPST 1707
+PKP KPKP V+ +P VKP +
Sbjct: 74 EAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFENTAPA 121
Score = 42.4 bits (99), Expect = 8e-04
Identities = 12/65 (18%), Positives = 19/65 (29%)
Query: 1644 TTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVI 1703
+ S + P P S T P + + +P +P+P PK
Sbjct: 17 GSHMSVHQVIELPAPAQPISVTMVTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAP 76
Query: 1704 PPSTK 1708
K
Sbjct: 77 VVIEK 81
Score = 38.5 bits (89), Expect = 0.017
Identities = 11/94 (11%), Positives = 19/94 (20%)
Query: 1614 PTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPIT 1673
E + VV E + K P + +P
Sbjct: 43 ADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKR 102
Query: 1674 TIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
+KP + T + T+
Sbjct: 103 DVKPVESRPASPFENTAPARLTSSTATAATSKPV 136
Score = 38.2 bits (88), Expect = 0.018
Identities = 14/95 (14%), Positives = 20/95 (21%), Gaps = 5/95 (5%)
Query: 1613 KPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPI 1672
V EPE EP +PKP K
Sbjct: 43 ADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPK-----PKPVKKVQ 97
Query: 1673 TTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
K V+ +P + + +T
Sbjct: 98 EQPKRDVKPVESRPASPFENTAPARLTSSTATAAT 132
Score = 38.2 bits (88), Expect = 0.021
Identities = 13/96 (13%), Positives = 23/96 (23%)
Query: 1614 PTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPIT 1673
T + +P EPE EPI ++PKP +
Sbjct: 40 VTPADLEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQ 99
Query: 1674 TIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKD 1709
+ + P + ++K
Sbjct: 100 PKRDVKPVESRPASPFENTAPARLTSSTATAATSKP 135
Score = 37.0 bits (85), Expect = 0.049
Identities = 15/98 (15%), Positives = 26/98 (26%), Gaps = 1/98 (1%)
Query: 1609 TEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTR 1668
E +P E V+ +P+ +P + ++
Sbjct: 58 VVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDVKPVESRPASPFEN 117
Query: 1669 PKPITTIKPKPTTVKPKPTTTVKPKPT-TVKPKPVIPP 1705
P T KP T+V P + +P P
Sbjct: 118 TAPARLTSSTATAATSKPVTSVASGPRALSRNQPQYPA 155
Score = 34.3 bits (78), Expect = 0.31
Identities = 10/96 (10%), Positives = 18/96 (18%)
Query: 1614 PTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPIT 1673
++ E E P K P +PK
Sbjct: 45 LEPPQAVQPPPEPVVEPEPEPEPIPEPPKEAPVVIEKPKPKPKPKPKPVKKVQEQPKRDV 104
Query: 1674 TIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKD 1709
+ T + +T P ++
Sbjct: 105 KPVESRPASPFENTAPARLTSSTATAATSKPVTSVA 140
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.7 bits (126), Expect = 2e-06
Identities = 98/676 (14%), Positives = 166/676 (24%), Gaps = 272/676 (40%)
Query: 1406 RVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDW 1465
R +TL ++ L + + S+L +++F + L +G D
Sbjct: 7 RPLTLSHGSLEHVLLV---PTASFFIASQL------QEQFNKI-----LPEPTEGFAADD 52
Query: 1466 EYPTCWQVNCDAGPDSDKESFGLFV----RELHQA-FKPHGLLLSAAVSPSKQVINAAY- 1519
E P + E G F+ + + +L+ + Y
Sbjct: 53 E------------PTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCL----TEFENCYL 96
Query: 1520 ---DVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKG 1576
D+ AL+ L + T + K Y A K
Sbjct: 97 EGNDIHALAAKLLQENDTTLVKTKELIKN----------------YITARIMAKRPFDKK 140
Query: 1577 APSRKLVMGVHPLLSTITE-------VLGHGPG-GNYESTTEE----YKPTSEESKPTTV 1624
+ S L + E + G G GN + EE Y+
Sbjct: 141 SNS--------ALFRAVGEGNAQLVAIFG---GQGNTDDYFEELRDLYQ----------- 178
Query: 1625 STSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIK--PKPTTV 1682
T + + T TT + + ++ P+
Sbjct: 179 -------------TYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSN- 224
Query: 1683 KPKPTTTVKPKPTTVKPKPVIPPSTKDEFKIVCYFTNWAWY----RQSGGKYLPSDIDSD 1738
P + P+ S ++ A Y + G + P ++ S
Sbjct: 225 --------TPDKDYLLSIPI---S----CPLIG-VIQLAHYVVTAKLLG--FTPGELRSY 266
Query: 1739 LCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKKGVKVT------------- 1785
L + ++ + I D+W + +T L GV+
Sbjct: 267 LKGATGHSQGLVTA--VAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSIL 324
Query: 1786 --------------LAIGGWNDSAGNKYSRLVNSQQARSK--FIAHVVN----FILEHNF 1825
L+I Y NS K I+ +VN ++
Sbjct: 325 EDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEIS-LVNGAKNLVV---- 379
Query: 1826 DGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAA--------------------FN 1865
GP G +++ +A F
Sbjct: 380 ------------------SGPPQSLYGLNLTLRKAKAPSGLDQSRIPFSERKLKFSNRFL 421
Query: 1866 P-----HDLLLSAAVS------PSKAVIDNAYD--IPV-----------MSENL-----D 1896
P H LL A V NA D IPV +S ++ D
Sbjct: 422 PVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVLSGSISERIVD 481
Query: 1897 WISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKVIFGMPMY 1956
I + W+ T T H + FG P
Sbjct: 482 CIIRLPVK----WETTT-----------QFKAT-------HI----------LDFG-P-- 506
Query: 1957 GQSF---TLADKNKNG 1969
G + L +NK+G
Sbjct: 507 GGASGLGVLTHRNKDG 522
Score = 51.2 bits (122), Expect = 5e-06
Identities = 87/565 (15%), Positives = 165/565 (29%), Gaps = 154/565 (27%)
Query: 533 QELKAEFDKHDYSIAVGISGYKEILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVS 592
+L+ +F+K IL + A +D E + G VS
Sbjct: 31 SQLQEQFNK--------------ILPEPTEGFAADD--EPTTPAEL-----VGKFLGYVS 69
Query: 593 PLNSRPGEPYPNYNINTALKLIDELGGDKRKIVIGVPFYGQSYTLKLDKEHGLGAETDGP 652
L EP + L L L + L+ + H L A+
Sbjct: 70 SLV----EPSKVGQFDQVLNLC--LTEFENCY------------LEGNDIHALAAKLLQE 111
Query: 653 GLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKS--LEPRSMGTLKLDKEHGLGAETDG 710
+ + Y K + + S G +L G G
Sbjct: 112 NDTTLVKTKELIKNYITARIMAKR---PFDKKSNSALFRAVGEGNAQLVAIFG------G 162
Query: 711 PGLAGEYTQQPGMLAYYEICYRIKTRKWTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKV 770
G +Y ++ + Y+ Y + ++ + ++L T
Sbjct: 163 QGNTDDYFEE--LRDLYQT-YHVLVGDL-IKFSAETLSEL-------------IRTTLDA 205
Query: 771 KFIKSNGYAGIMAWTIDLDDFHNK----CCMESFPLL------------RAVNRAFGRLK 814
+ + + G I+ W + + +K S PL+ + + G L+
Sbjct: 206 EKVFTQGLN-ILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELR 264
Query: 815 DKKPSAPDCTRPTVSTPSPIGTSTTEDSVSSNWSLEQSAVFTLGL--QQ----SNASTSI 868
A ++ V T I + + +S + + +F +G+ + ++ SI
Sbjct: 265 SYLKGATGHSQGLV-TAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAYPNTSLPPSI 323
Query: 869 LQVKFIKSNGYAGIMAWTIDLDDFHNKCCMDKSRFRKIEGEKAKCTGLYQINSVNSF--- 925
L+ + G M +L + ++K+ + K L +N +
Sbjct: 324 LEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTN-SHLPAGKQVEISL--VNGAKNLVVS 380
Query: 926 --PNWNIDNRRFSKSRFRKIEGQKAKCTGLYQTNSVNS-----FPNWNIDNRRF------ 972
P + RK KA +GL Q+ S F N RF
Sbjct: 381 GPP---QSLYGLN-LTLRKA---KAP-SGLDQSRIPFSERKLKFSN------RFLPVASP 426
Query: 973 -----------SIDSDTDSDSCT-SGEY--YPV-DGECGSYYRCILGTLKKESCAPGLHW 1017
I+ D ++ + + + PV D GS R + S + +
Sbjct: 427 FHSHLLVPASDLINKDLVKNNVSFNAKDIQIPVYDTFDGSDLRVL-----SGSISERI-- 479
Query: 1018 NKVNKIC----DWPKSAKCEDKSLH 1038
V+ I W + + K+ H
Sbjct: 480 --VDCIIRLPVKWETTTQF--KATH 500
Score = 44.7 bits (105), Expect = 5e-04
Identities = 85/576 (14%), Positives = 145/576 (25%), Gaps = 222/576 (38%)
Query: 105 SRLNFISSVL-EMFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTL 163
+ FI+S L E F+ L + A +DE E + F ++
Sbjct: 24 TASFFIASQLQEQFNKI----LPEPTEGFAADDEPTTPAELVG----KFLGYV------- 68
Query: 164 RRNNYQLTLTSPGVIDRKTSLVDISVVAPLVDLI--LLKSFNNDHMDDEVVPVKPNTKVN 221
+SLV+ S V ++ L F N +++ +
Sbjct: 69 ------------------SSLVEPSKVGQFDQVLNLCLTEFENCYLEGN----------D 100
Query: 222 IQ--VTSTIANFNNIESAVYNWIKK--GARPEQIIIGIPFFGKSY-RLFNRSEYGLGATV 276
I + + IK AR I+ PF KS LF G A +
Sbjct: 101 IHALAAKLLQENDTTLVKTKELIKNYITAR---IMAKRPFDKKSNSALFRAVGEG-NAQL 156
Query: 277 KGPGTEGKYTQMPGYLAFFEVCNKFKDKTWRHFTDSNGEPFMVKKDE----WITYENNDS 332
G N + + +E + TY
Sbjct: 157 --------VAIFGG--------------------QGNTDDYF---EELRDLYQTYHV--- 182
Query: 333 IRRKMNYIKDR-HLGGAMLWTL--DLDDFRGFCGQKYPLLSAVVSNLQPEEPEPKVVCYV 389
+ D L L D Q +L + E P
Sbjct: 183 ------LVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWL------ENPSNT----- 225
Query: 390 TNWSGSRKSDGKFVPENIDYKLCTHIVYAFASLDPNTLSIQAGN-----------PEADI 438
P + DY L + S + IQ + P
Sbjct: 226 --------------P-DKDY-LLS----IPISCPLIGV-IQLAHYVVTAKLLGFTPG--- 261
Query: 439 DDNFYQRISSSPLVTHGKVKILIAIGGWTDSSGEKYSQLISSGSNRKKFIKSVLTFLRRF 498
+ H + ++ A+ I+ + + F SV +
Sbjct: 262 --ELRSYLKG--ATGHSQ-GLVTAV-------------AIAETDSWESFFVSVRKAITVL 303
Query: 499 DFAGLHFDWNYPVCWQADCSKQHKADKGNFVKLIQELKAEFDKHDYSIA---VGISGY-K 554
F G+ YP L + + +++ + + IS +
Sbjct: 304 FFIGVRCYEAYPNT-----------------SLPPSILEDSLENNEGVPSPMLSISNLTQ 346
Query: 555 EILEVAYDFPALNDHVEFMSLMSYDYHGAWEGITGLVSPLNSRP-----GEPYPNYNINT 609
E ++ + N H+ + +S +N G P Y +N
Sbjct: 347 EQVQDYVN--KTNSHLPAGKQVE-------------ISLVNGAKNLVVSGPPQSLYGLNL 391
Query: 610 AL-KLIDELGGD-------KRKIV-------IGVPF 630
L K G D +RK+ + PF
Sbjct: 392 TLRKAKAPSGLDQSRIPFSERKLKFSNRFLPVASPF 427
Score = 44.3 bits (104), Expect = 6e-04
Identities = 37/262 (14%), Positives = 71/262 (27%), Gaps = 97/262 (37%)
Query: 49 YAAIDPVSRALIPEDLEYDVIKGGYKSFLGLKEANP-ELKVYLAVKSNFVSITSDRESRL 107
Y ++ + + G+ S L + NP L ++ F + R
Sbjct: 1636 YKT-SKAAQDVWNRADNHFKDTYGF-SILDIVINNPVNLTIH------FGGEKG-KRIRE 1686
Query: 108 NFISSVLEMFDMYKFDGLDLNVKDPALNDEDDDDLESIANERSDFSTFIQELSSTLRRNN 167
N+ + + E +D +K + E ++ S F + LS+T
Sbjct: 1687 NYSAMIFETI-------VDGKLKTEKIFKEINEHSTSY-----TFRSEKGLLSAT---QF 1731
Query: 168 YQ--LTLTS---------PGVIDRK-----------TSLVDISVVAPLVDLILL------ 199
Q LTL G+I +L ++ V + L+ +
Sbjct: 1732 TQPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYAALASLADVMSIESLVEVVFYRGM 1791
Query: 200 ---------------------------KSFNNDHMDDEVVPVKPNTKVNIQVTSTIANFN 232
SF+ + + V V T ++ I N+N
Sbjct: 1792 TMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKRTGWLVE----IVNYN 1847
Query: 233 NIESAVYNWIKKGARPEQIIIG 254
+Q +
Sbjct: 1848 -------------VENQQYVAA 1856
Score = 39.3 bits (91), Expect = 0.023
Identities = 53/345 (15%), Positives = 88/345 (25%), Gaps = 130/345 (37%)
Query: 1307 AWTPNPTEWVWHPPTEPTTT---------HIS-VTEKSPLDQYFKIV----CYFTNWAWY 1352
P PTE EPTT ++S + E S + Q+ +++ F N
Sbjct: 39 KILPEPTEGFAAD-DEPTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEFEN---- 93
Query: 1353 RPGKGKYVLKKVPWINILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFYERVVTLKK 1412
Y+ +I L L T K +K Y + K+
Sbjct: 94 -----CYLEGN----DIHALAAKLLQENDTTLVKTKELIK----NY-----ITARIMAKR 135
Query: 1413 KGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQ 1472
K S S L + + + F G Q
Sbjct: 136 PFDKKS-------------NSALFRAVGEGN------AQLVA--IFGG-----------Q 163
Query: 1473 VNCDAGPDSD--KESFGLFVRELHQAFKPHGLLLSAAVSPSKQVINAAYDVKALSESLDW 1530
G D +E L R+L+Q + V L
Sbjct: 164 -----GNTDDYFEE---L--RDLYQTYHVL--------------------VGDL------ 187
Query: 1531 ISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKK--GAPSRKLVMGVHP 1588
I ++ L D F + W++ P + ++ + P
Sbjct: 188 IKFSA-----------ETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSI-P 235
Query: 1589 L---LSTITEVLGHGPGGNYESTTEEYKPTSEESKPTTVSTSTVV 1630
+ L + + L H Y T + T E + +
Sbjct: 236 ISCPLIGVIQ-LAH-----YVVTAKLLGFTPGELRSYLKGATGHS 274
Score = 36.2 bits (83), Expect = 0.20
Identities = 50/321 (15%), Positives = 83/321 (25%), Gaps = 155/321 (48%)
Query: 2133 ELYQHEGDCAK--FASCENGLIKIY---------DCPPGL--HFNFVRAFYTHIESKQSN 2179
+LY+ A+ + +N Y + P L HF +
Sbjct: 1634 DLYKTS-KAAQDVWNRADNHFKDTYGFSILDIVINNPVNLTIHFGGEKG----------- 1681
Query: 2180 QQEQIRYAEPYKVICYYTSWAYLRQAEGKYSPEDIDGSLCTHLVYAFADLDEQ--ELVIR 2237
++IR E Y + + T +DG L T + F +++E R
Sbjct: 1682 --KRIR--ENYSAMIFET---------------IVDGKLKTEKI--FKEINEHSTSYTFR 1720
Query: 2238 SHNNKLDLEQGFYEKITKFNERGIQV-ILAIGG--WSDSRS------DK---------YS 2279
S L T+F Q + + + D +S D Y+
Sbjct: 1721 SEKGLLSA--------TQFT----QPALTLMEKAAFEDLKSKGLIPADATFAGHSLGEYA 1768
Query: 2280 RLVNDIPARRNFVRHVTEFLEFYGFNGLEFAWEYPKCWQTCSTVKSHEWTVVRDSLGARG 2339
L + + + E S V+ VV RG
Sbjct: 1769 ALA-----------SLADVMSI----------E--------SLVE-----VVF----YRG 1790
Query: 2340 PYAYNGKLWLSYDDTRDIRRKCKSIKQDGLG-----------GAMVWSIDLDDFQNLCSC 2388
++ +D LG G + S + Q +
Sbjct: 1791 MTMQV------------------AVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVER 1832
Query: 2389 -----GPYPLLSAVNYELRNT 2404
G L+ VNY N
Sbjct: 1833 VGKRTGW--LVEIVNY---NV 1848
Score = 36.2 bits (83), Expect = 0.20
Identities = 64/423 (15%), Positives = 112/423 (26%), Gaps = 158/423 (37%)
Query: 2091 PVPPKH-----------EDNVPQTTGTQYEEDETLSDDTIVIDSKSNRCNRTGELYQHEG 2139
VP +P+ T +DE + EL
Sbjct: 21 LVPTASFFIASQLQEQFNKILPEPTEGFAADDEPTT---------------PAELV---- 61
Query: 2140 DCAKFASCENGLI--KIYDCPPGLHFNFVRAFYTHIESK--QSN----------QQEQIR 2185
KF G + + G + T E+ + N Q+
Sbjct: 62 --GKFL----GYVSSLVEPSKVGQFDQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTT 115
Query: 2186 YAEPYKVI-CYYTSWAYLRQAEGKYSPEDI-----DGSLCTHLVYAF-----AD--LDE- 2231
+ ++I Y T+ ++ K S + +G+ LV F D +E
Sbjct: 116 LVKTKELIKNYITARIMAKRPFDKKSNSALFRAVGEGN--AQLVAIFGGQGNTDDYFEEL 173
Query: 2232 QEL----------VIRSHNNKLDLEQGFYEKITKFNERGIQVI--------------LA- 2266
++L +I+ L K +G+ ++ L
Sbjct: 174 RDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLS 233
Query: 2267 -------IG--------------GWSDSRSDKYSRL------VNDIPA---------RRN 2290
IG G++ + S L + +
Sbjct: 234 IPISCPLIGVIQLAHYVVTAKLLGFT--PGELRSYLKGATGHSQGLVTAVAIAETDSWES 291
Query: 2291 FVRHVTEFLEFYGFNGLEFAWEYPKCWQTCSTVKSHEWTVVRDSL----GARGPYAYNGK 2346
F V + + F G+ YP S +++ DSL G P
Sbjct: 292 FFVSVRKAITVLFFIGVRCYEAYPNT--------SLPPSILEDSLENNEGVPSPM----- 338
Query: 2347 LWLSYDDTRDIRRKC--KSIKQ--DGLGGAMVWSIDL-DDFQNLCSCGPYPL-LSAVNYE 2400
LS ++ ++ + + L I L + +NL GP P L +N
Sbjct: 339 --LS---ISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGP-PQSLYGLNLT 392
Query: 2401 LRN 2403
LR
Sbjct: 393 LRK 395
Score = 33.5 bits (76), Expect = 1.2
Identities = 43/265 (16%), Positives = 77/265 (29%), Gaps = 89/265 (33%)
Query: 2202 LRQAEGKYSPEDIDGSLCTHLVYAFADLDEQ----ELVIR--SHNNKL--DLEQGFYEKI 2253
L++ K PE +G FA DE ELV + + + L + G ++++
Sbjct: 33 LQEQFNKILPEPTEG---------FAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFDQV 83
Query: 2254 TK-----FNERGIQ------VILAIGGWSDSRSDK-------Y--SRLVNDIPARRN--- 2290
F ++ + + +D+ K Y +R++ P +
Sbjct: 84 LNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYITARIMAKRPFDKKSNS 143
Query: 2291 -FVRHVTE-----FLEFYG-------FNGLEFAWE-YPKCWQT-CSTVKSHEWTVVRDSL 2335
R V E F G F L ++ Y ++R +L
Sbjct: 144 ALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTL 203
Query: 2336 GARGPY--AYNGKLWLSYDDTR-DIRRKCKSIKQDGLGGAMVWSIDLDDFQNLCSCGPY- 2391
A + N WL D D+ L S P
Sbjct: 204 DAEKVFTQGLNILEWLENPSNTPD-----------------------KDY--LLSI-PIS 237
Query: 2392 -P---LLSAVNYELRNTTLNYEPKD 2412
P ++ +Y + L + P +
Sbjct: 238 CPLIGVIQLAHYVVTAKLLGFTPGE 262
Score = 33.1 bits (75), Expect = 1.8
Identities = 49/295 (16%), Positives = 92/295 (31%), Gaps = 107/295 (36%)
Query: 660 QQPGM-LAYYEIC------------YRIKTRKWT----VQRNTKSLEPRSMGTLKLDKEH 702
Q+ GM + Y+ + T ++ V N +L T+ H
Sbjct: 1627 QEQGMGMDLYKTSKAAQDVWNRADNHFKDTYGFSILDIVINNPVNL------TI-----H 1675
Query: 703 GLGAETDGPGLAGEYTQQPGMLAYYEICY--RIKTRKWTVQRNTKSLEPFTFQGDQWVSY 760
G + G + Y+ M+ +E ++KT K + + +TF+ ++ +
Sbjct: 1676 FGGEK--GKRIRENYS---AMI--FETIVDGKLKTEK-IFKEINEHSTSYTFRSEKGLLS 1727
Query: 761 EDPTS-------LTEKVKF--IKSNGYAGIMAWTIDLDDF---HN-------KCCMESFP 801
T L EK F +KS G I D H+ +
Sbjct: 1728 A--TQFTQPALTLMEKAAFEDLKSKGL-------IPADATFAGHSLGEYAALASLADVMS 1778
Query: 802 L---LRAVN-RAFGRLKDKKPSAPDCTRPTVS----TPSPIGTSTTEDSV---------S 844
+ + V R G + R P + S +++++
Sbjct: 1779 IESLVEVVFYR--GMTMQVAVPRDELGRSNYGMIAINPGRVAASFSQEALQYVVERVGKR 1836
Query: 845 SNWSLEQSAV-FTLGLQQ---S------NASTSILQVKFIKSNGYAGIMAWTIDL 889
+ W +E V + + QQ + + T++L FIK ID+
Sbjct: 1837 TGWLVE--IVNYNVENQQYVAAGDLRALDTVTNVL--NFIKLQK--------IDI 1879
Score = 31.9 bits (72), Expect = 3.2
Identities = 55/368 (14%), Positives = 92/368 (25%), Gaps = 163/368 (44%)
Query: 1699 PKPVIPPSTKDEFKIVCYFTNWAWYRQSGGKYLPSDIDSDLCTHVIYG----FAVL---- 1750
+ K + I Y T A R + +S L V G A+
Sbjct: 109 LQENDTTLVKTKELIKNYIT--A--RIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQG 164
Query: 1751 DTDQLVIKPHDTWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARS 1810
+TD D + +L Y+ L +G + S L+ +
Sbjct: 165 NTD-------DYFEEL-RDLYQTYHVL----------VGDLIKFSAETLSELIRTTLDAE 206
Query: 1811 KFIAHVVNFILEHNFDGLDL-DW-EYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHD 1868
K GL++ +W E P P D
Sbjct: 207 KVFTQ-----------GLNILEWLENPS-------NTP-------------------DKD 229
Query: 1869 LLLSAAVS-P----------------------------------SKAVI----------- 1882
LLS +S P S+ ++
Sbjct: 230 YLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSW 289
Query: 1883 DNAYDIPVMS-ENLDWISVMTYDYHGQWDKKTGHVAPMYALP----------NDTTPT-- 1929
++ + + L +I V P +LP N+ P+
Sbjct: 290 ESFFVSVRKAITVLFFIGV-----RCY------EAYPNTSLPPSILEDSLENNEGVPSPM 338
Query: 1930 -----------------FNANYSLHYWVS---HGADRKKVIFGMP--MYGQSFTLAD-KN 1966
N++ V + V+ G P +YG + TL K
Sbjct: 339 LSISNLTQEQVQDYVNKTNSHLPAGKQVEISLVNGAKNLVVSGPPQSLYGLNLTLRKAKA 398
Query: 1967 KNGLNSQT 1974
+GL+ Q+
Sbjct: 399 PSGLD-QS 405
>1cnv_A Concanavalin B; plant chitinase, chitin binding protein, SEED
protein; 1.65A {Canavalia ensiformis} SCOP: c.1.8.5
Length = 299
Score = 50.5 bits (120), Expect = 3e-06
Identities = 36/204 (17%), Positives = 66/204 (32%), Gaps = 39/204 (19%)
Query: 1725 QSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVI-------KPHDTWADLDNKFYEKVTAL 1777
Q L ++ V F ++ + + + ++
Sbjct: 13 QREDGLLRDTCKTNNYKIVFISFLDKFGCEIRKPELELEGVCGPSVGNPCSFLESQIKEC 72
Query: 1778 KKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFIL---------EHNFDGL 1828
++ GVKV LA+GG + S ++ + L + DG+
Sbjct: 73 QRMGVKVFLALGGPKGTYS------ACSADYAKDLAEYLHTYFLSERREGPLGKVALDGI 126
Query: 1829 DLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFN--PHDLLLSAAVSPSKAVIDNAY 1886
D + P D+ + +L++EL + LLSAA P D
Sbjct: 127 HFDIQKP------------VDELNWDNLLEELYQIKDVYQSTFLLSAA--PGCLSPDEYL 172
Query: 1887 DIPVMSENLDWISVMTY-DYHGQW 1909
D + + + D+I V Y D Q+
Sbjct: 173 DNAIQTRHFDYIFVRFYNDRSCQY 196
Score = 44.0 bits (103), Expect = 4e-04
Identities = 34/190 (17%), Positives = 60/190 (31%), Gaps = 42/190 (22%)
Query: 1407 VVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLL---------KYQ 1457
+ ++ GVKV LA+GG G YS SA + E++ + L K
Sbjct: 69 IKECQRMGVKVFLALGGP----KGTYS--ACSADYAKDLAEYLHTYFLSERREGPLGKVA 122
Query: 1458 FDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVSPSKQVINA 1517
DG+ D + P D+ ++ + EL+Q + + +P +
Sbjct: 123 LDGIHFDIQKP------------VDELNWDNLLEELYQIKDVYQSTFLLSAAPGCLSPDE 170
Query: 1518 AYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKKG- 1576
D + D+I V Y+ Y + W K
Sbjct: 171 YLDNAIQTRHFDYIFVRFYNDRSC----------QYSTGNIQRIR----NAWLSWTKSVY 216
Query: 1577 APSRKLVMGV 1586
+ L + +
Sbjct: 217 PRDKNLFLEL 226
>3gdb_A Endo-D, putative uncharacterized protein SPR0440; alpha-beta-barrels,
cell WALL, peptidoglycan-anchor, secreted, hydrolase;
HET: PGE; 1.87A {Streptococcus pneumoniae} PDB: 2xqx_A
Length = 937
Score = 50.0 bits (118), Expect = 1e-05
Identities = 13/105 (12%), Positives = 26/105 (24%)
Query: 1606 ESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTT 1665
+ E T+E K + E+ E T + ++ ++
Sbjct: 36 LVSGESEHSTNEADKQNEGEHARENKLEKAEGVATASETASPASNEAATTETAEAASAAK 95
Query: 1666 TTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDE 1710
+ KPK + KP P+ +
Sbjct: 96 PEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGDESKPAAEAN 140
Score = 47.3 bits (111), Expect = 7e-05
Identities = 29/309 (9%), Positives = 68/309 (22%), Gaps = 47/309 (15%)
Query: 1606 ESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTT 1665
++ E + E + S + E ++ K + T +
Sbjct: 51 QNEGEHARENKLEKAEGVATASETASPASNEAATTETAEAASAAKPEEKASEVVAETPSA 110
Query: 1666 TTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDEFKIVCYFTNWAWYRQ 1725
+PK + KP + + + + E + + + +
Sbjct: 111 EAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEVQPDVPKNTEKTLKPKEIKFNSWEE 170
Query: 1726 SGGKYLPSDIDSDLCTHVI----YGFAVLDTDQLVIKPHDTWADLDNKFYEK-------- 1773
+ D + + L ++ + N +
Sbjct: 171 LLKWEPGAREDDAINRGSVVLASRRTGHLVNEKASKEAKVQALSNTNSKAKDHASVGGEE 230
Query: 1774 ---------------------------VTALKKKGVKVTLAIGGWNDSAGNKYSRLVN-- 1804
+ A + GV V + ++ R
Sbjct: 231 FKAYAFDYWQYLDSMVFWEGLVPTPDVIDAGHRNGVPVYGTLFFNWSNSIADQERFAEAL 290
Query: 1805 --SQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRA 1862
+V+ + +DG ++ E D + + F KE A
Sbjct: 291 KQDADGSFPIARKLVDMAKYYGYDGYFINQETT----GDLVKPLGEKMRQFMLYSKEYAA 346
Query: 1863 AFNPHDLLL 1871
N
Sbjct: 347 KVNHPIKYS 355
Score = 41.5 bits (96), Expect = 0.004
Identities = 13/112 (11%), Positives = 21/112 (18%), Gaps = 5/112 (4%)
Query: 1599 HGPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKP 1658
H Y E P + + VS + E E
Sbjct: 12 HQLENLYFQGEETAVPENSGANTELVSGES-----EHSTNEADKQNEGEHARENKLEKAE 66
Query: 1659 PTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDE 1710
T++ T P + K + D+
Sbjct: 67 GVATASETASPASNEAATTETAEAASAAKPEEKASEVVAETPSAEAKPKSDK 118
Score = 39.2 bits (90), Expect = 0.021
Identities = 28/272 (10%), Positives = 61/272 (22%), Gaps = 31/272 (11%)
Query: 1257 TSATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWV 1316
SA E+ + + KP + E T + ++ V
Sbjct: 91 ASAAKPEEKASEVVAETPSAEAKPKSDKETEAKPEATNQGDESKPAAEANKTEKEVQPDV 150
Query: 1317 WHPPTEPTTTHISVTEKSPLDQYFK------------IVCYFTNWAWYRPGKGKYVLKKV 1364
+ ++ V + + + KV
Sbjct: 151 PKNTEKTLKPKEIKFNSWEELLKWEPGAREDDAINRGSVVLASRRTGHLVNEKASKEAKV 210
Query: 1365 PWINILKLYVTLQTGLGTDQEKENTFLKISELTYVHILFY--------ERVVTLKKKGVK 1416
++ +G ++ K F Y+ + + + + + GV
Sbjct: 211 QALSNTNSKAKDHASVGGEEFKAYAF---DYWQYLDSMVFWEGLVPTPDVIDAGHRNGVP 267
Query: 1417 VSLAIGGWNDSLGGKYSRLVN----SATARQRFIEHVVKFLLKYQFDGLDLDWEYPTCWQ 1472
V + + R A +V Y +DG ++ E
Sbjct: 268 VYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQETT---- 323
Query: 1473 VNCDAGPDSDKESFGLFVRELHQAFKPHGLLL 1504
+ F L+ +E
Sbjct: 324 GDLVKPLGEKMRQFMLYSKEYAAKVNHPIKYS 355
>2xtk_A CHIA1, class III chitinase CHIA1; hydrolase, GH18; HET: AZM; 2.00A
{Aspergillus fumigatus} PDB: 2xuc_A 2xvp_A 2xvn_A*
Length = 310
Score = 46.8 bits (110), Expect = 5e-05
Identities = 36/245 (14%), Positives = 67/245 (27%), Gaps = 47/245 (19%)
Query: 1723 YRQSGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKKGV 1782
+ + P + C +Y +L+ H D + + G
Sbjct: 37 FPDMSPGHWPGSNFGNQCDGSVYVTNDGVVTKLLSGCHQIMED--------IPICQAAGK 88
Query: 1783 KVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILE-------------HNFDGLD 1829
KV L+IGG S + S+ + F + DG D
Sbjct: 89 KVLLSIGGA---YPPDQS--ILSEDSAVAFATFLWGAFGPVAEGWEGPRPFGDVVVDGFD 143
Query: 1830 LDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAYDIP 1889
D E + ++ LSAA P + D
Sbjct: 144 FDIE----------HNGGFGYATMVNTFRQYFNQVPERKFYLSAA--PQCIIPDAQLSDA 191
Query: 1890 VMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKV 1949
+ + D+I + Y+ + + + TFN + + + + K+
Sbjct: 192 IFNAAFDFIWIQYYNTAACSA---------KSFIDTSLGTFNFDAWVTVLKASASKDAKL 242
Query: 1950 IFGMP 1954
G+P
Sbjct: 243 YVGLP 247
Score = 41.4 bits (96), Expect = 0.002
Identities = 32/197 (16%), Positives = 54/197 (27%), Gaps = 39/197 (19%)
Query: 1403 FYERVVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHV------------- 1449
E + + G KV L+IGG S + S + F +
Sbjct: 76 IMEDIPICQAAGKKVLLSIGGAY---PPDQS--ILSEDSAVAFATFLWGAFGPVAEGWEG 130
Query: 1450 VKFLLKYQFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLLSAAVS 1509
+ DG D D E+ + R+ LSAA
Sbjct: 131 PRPFGDVVVDGFDFDIEHNG----------GFGYATMVNTFRQYFNQVPERKFYLSAA-- 178
Query: 1510 PSKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTM 1569
P + +A + + D+I + Y+ D FN + +
Sbjct: 179 PQCIIPDAQLSDAIFNAAFDFIWIQYYNTAACS---------AKSFIDTSLGTFNFDAWV 229
Query: 1570 NYWMKKGAPSRKLVMGV 1586
+ KL +G+
Sbjct: 230 TVLKASASKDAKLYVGL 246
>3iox_A AGI/II, PA; alpha helix, PPII helix, supersandwich fold, surface
adhesin WALL, peptidoglycan-anchor, cell adhesion; HET:
PMS; 1.80A {Streptococcus mutans} PDB: 3ipk_A* 1jmm_A
Length = 497
Score = 46.8 bits (109), Expect = 8e-05
Identities = 14/103 (13%), Positives = 20/103 (19%)
Query: 1602 GGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTT 1661
+ + + V + + + P T
Sbjct: 388 AIKMSGPNNYVTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVT 447
Query: 1662 TSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIP 1704
T KP KP T KP V P P
Sbjct: 448 KEKPTPPVKPTAPTKPTYETEKPLKPAPVAPNYEKEPTPPTRL 490
Score = 42.6 bits (98), Expect = 0.002
Identities = 16/84 (19%), Positives = 24/84 (28%), Gaps = 2/84 (2%)
Query: 1631 TTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPK--PITTIKPKPTTVKPKPTT 1688
T+ + T K+P + + +T KP P PT
Sbjct: 403 TSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPVKPTAPTK 462
Query: 1689 TVKPKPTTVKPKPVIPPSTKDEFK 1712
+KP PV P K+
Sbjct: 463 PTYETEKPLKPAPVAPNYEKEPTP 486
Score = 40.3 bits (92), Expect = 0.007
Identities = 15/102 (14%), Positives = 23/102 (22%)
Query: 1605 YESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTST 1664
+ + TV T T + +
Sbjct: 376 SSDAPNSWYGAGAIKMSGPNNYVTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLN 435
Query: 1665 TTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPS 1706
R + + + T KPT KP T KP P +
Sbjct: 436 GKIRAVNVPKVTKEKPTPPVKPTAPTKPTYETEKPLKPAPVA 477
Score = 36.0 bits (81), Expect = 0.17
Identities = 17/135 (12%), Positives = 34/135 (25%), Gaps = 2/135 (1%)
Query: 1558 DDFFYFNANFTMNYWMKKGAPSRKLVMGVHPLLSTITEV-LGHGPGGNYESTTEEYKPTS 1616
+ + + + W AP+ G + V +G N ++
Sbjct: 360 SRWTMYKNSQAGSGWDSSDAPNSWYGAGAIKMSGPNNYVTVGATSATNVMPVSDMPVVPG 419
Query: 1617 EESKPTTVSTSTVVTTEEPEQTEEPITTTTTST-TTTTKRPKPPTTTSTTTTRPKPITTI 1675
+++ + P T T P PT + +P P+
Sbjct: 420 KDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPVKPTAPTKPTYETEKPLKPAPVAPN 479
Query: 1676 KPKPTTVKPKPTTTV 1690
K T +
Sbjct: 480 YEKEPTPPTRLEHHH 494
Score = 34.1 bits (76), Expect = 0.71
Identities = 12/81 (14%), Positives = 19/81 (23%), Gaps = 4/81 (4%)
Query: 1247 DWPYRTKCKQTSATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSG 1306
T K+ + + + P +KPT + P T +
Sbjct: 418 PGKDNTDGKKPNIWYSLNGKIRAVNVPKVTKEKPTPPVKPTAPTKPTYETEKPLKPAPVA 477
Query: 1307 AWTPNPTEWVWHPPTEPTTTH 1327
PPT H
Sbjct: 478 PNYEKEPT----PPTRLEHHH 494
Score = 31.4 bits (69), Expect = 4.7
Identities = 15/69 (21%), Positives = 19/69 (27%), Gaps = 4/69 (5%)
Query: 1642 ITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP 1701
+T TS T P T K K PK T KP P
Sbjct: 398 VTVGATSATNVMPVSDMPVVPGKDNTDGKKPNIWYSLNG----KIRAVNVPKVTKEKPTP 453
Query: 1702 VIPPSTKDE 1710
+ P+ +
Sbjct: 454 PVKPTAPTK 462
>2gsj_A Protein PPL-2; mimosoideae, chimerolectin, endochitinase, glycosyl
hydrolase family 18, equilibrium sedimentation, X-RAY;
1.73A {Parkia platycephala}
Length = 271
Score = 45.1 bits (106), Expect = 1e-04
Identities = 39/192 (20%), Positives = 65/192 (33%), Gaps = 18/192 (9%)
Query: 1722 WYRQSGGKYLPSDIDSDLCTHVIYGFAVL----DTDQLVIKPHDTWADLDNKFYEK-VTA 1776
W + G L S +S L V F Q+ + H A+ + + A
Sbjct: 7 WGQNGGEGTLTSTCESGLYQIVNIAFLSQFGGGRRPQINLAGHCDPANNGCRTVSDGIRA 66
Query: 1777 LKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPK 1836
+++G+KV L+IGG YS +S Q ++ N L L
Sbjct: 67 CQRRGIKVMLSIGG----GAGSYSL--SSVQDARSVADYIWNNFLGGRSSSRPLGDAVLD 120
Query: 1837 CWQVDCKQGPASDKQGFADLIKELRAAFNP-HDLLLSAAVSPSKAVIDNAYDIPVMSENL 1895
D + G + L + L + LSAA P D + + + +
Sbjct: 121 GVDFDIEHGG----AYYDALARRLSEHNRGGKKVFLSAA--PQCPFPDQSLNKALSTGLF 174
Query: 1896 DWISVMTYDYHG 1907
D++ V Y+
Sbjct: 175 DYVWVQFYNNPQ 186
Score = 39.3 bits (91), Expect = 0.009
Identities = 32/191 (16%), Positives = 62/191 (32%), Gaps = 49/191 (25%)
Query: 1407 VVTLKKKGVKVSLAIGGWNDSLGGKYSRLVNSATARQRFIEHVVKFLL----------KY 1456
+ +++G+KV L+IGG G YS +S + +++ L
Sbjct: 64 IRACQRRGIKVMLSIGGG----AGSYSL--SSVQDARSVADYIWNNFLGGRSSSRPLGDA 117
Query: 1457 QFDGLDLDWEYPTCWQVNCDAGPDSDKESFGLFVRELHQAFKP-HGLLLSAAVSPSKQVI 1515
DG+D D E+ + R L + + + LSAA P
Sbjct: 118 VLDGVDFDIEHGGAYYDA--------------LARRLSEHNRGGKKVFLSAA--PQCPFP 161
Query: 1516 NAAYDVKALSESLDWISVMTYDYHGQWDKKTGHVAPLYEHPDDDFFYFNANFTMNYWMKK 1575
+ + + + D++ V Y+ + N + N W
Sbjct: 162 DQSLNKALSTGLFDYVWVQFYNNPQC--------------EFNSGNPSNFRNSWNKWTS- 206
Query: 1576 GAPSRKLVMGV 1586
+ + K +G+
Sbjct: 207 -SFNAKFYVGL 216
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR;
fatty acid synthase, acyl-carrier-protein, beta-ketoacyl
RED beta-ketoacyl synthase, dehydratase; 4.00A
{Saccharomyces cerevisiae}
Length = 1688
Score = 41.0 bits (96), Expect = 0.006
Identities = 31/130 (23%), Positives = 45/130 (34%), Gaps = 36/130 (27%)
Query: 724 LAYYEICYRIKTRK----WTVQRNTKSLEPFTFQGDQWVSYEDPTSLTEKVKFIKSNGYA 779
YY+ Y K V PF QG S +D +L ++FI
Sbjct: 516 TDYYQSIYAKYGAKGSTLIVV--------PFN-QG----SKQDVEAL---IEFIYDTEKN 559
Query: 780 GIMAWTID--------------LDDFHNKCCMESFPLLRAVNRAFGRLKDKKPSAPDCTR 825
G + W +D L+ +K +L + R G +K +K + TR
Sbjct: 560 GGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMMGCVKKQKSARGIETR 619
Query: 826 PT-VSTP-SP 833
P V P SP
Sbjct: 620 PAQVILPMSP 629
>3nwa_A GB, GB-1, GB1, envelope glycoprotein B; coiled-coil, membrane fusion,
viral P glycoprotein B, HSV-1, membrane; HET: NAG; 2.26A
{Human herpesvirus 1} PDB: 3nwf_A* 3nw8_A* 3nwd_A*
Length = 703
Score = 40.7 bits (95), Expect = 0.006
Identities = 15/99 (15%), Positives = 24/99 (24%), Gaps = 3/99 (3%)
Query: 1617 EESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTST---TTTRPKPIT 1673
+ + PT+ T V + T PKP T RP
Sbjct: 1 DPAAPTSPGTPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDN 60
Query: 1674 TIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDEFK 1712
+ +K + T PP+ +
Sbjct: 61 ATVAAGHATLREHLRDIKAENTDANFYVCPPPTGATVVQ 99
Score = 33.8 bits (77), Expect = 0.91
Identities = 10/91 (10%), Positives = 19/91 (20%), Gaps = 3/91 (3%)
Query: 1600 GPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPP 1659
PG + P + + + ++ ++ + P T
Sbjct: 10 TPGVAAATQAANGGPATPAPPALGAAPTGDPKPKKNKKPKNPTPPRPAGDNAT---VAAG 66
Query: 1660 TTTSTTTTRPKPITTIKPKPTTVKPKPTTTV 1690
T R P TV
Sbjct: 67 HATLREHLRDIKAENTDANFYVCPPPTGATV 97
Score = 31.1 bits (70), Expect = 6.3
Identities = 13/64 (20%), Positives = 17/64 (26%), Gaps = 1/64 (1%)
Query: 1272 KPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTEWVWHPPTEPTTTHISVT 1331
P PT T A P+T A T +P P PT +
Sbjct: 1 DPAAPTSPGTPGVAAATQAANGGPATPAPPAL-GAAPTGDPKPKKNKKPKNPTPPRPAGD 59
Query: 1332 EKSP 1335
+
Sbjct: 60 NATV 63
>2vtf_A Endo-beta-N-acetylglucosaminidase; hydrolase, family 85, glycosidase,
carbohydrat binding; HET: B3P PGE; 1.79A {Arthrobacter
protophormiae} PDB: 3fhq_A* 3fha_A*
Length = 626
Score = 39.8 bits (92), Expect = 0.014
Identities = 11/97 (11%), Positives = 28/97 (28%), Gaps = 12/97 (12%)
Query: 1412 KKGVKVSLAI----GGWNDSLGGKYSRLVNSATARQRFIEHVVKFLLKYQFDGLDLDWEY 1467
+ GV + + + L L + +++ Y FDG ++ +
Sbjct: 120 RNGVPILGNVFFPPTVYGGQLEWLEQMLEQEEDGSFPLADKLLEVADYYGFDGWFINQQT 179
Query: 1468 PTCWQVNCDAGPDSDKESFGLFVRELHQAFKPHGLLL 1504
+ E+ F+ L + ++
Sbjct: 180 EG--------ADEGTAEAMQAFLVYLQEQKPEGMHIM 208
Score = 34.0 bits (77), Expect = 0.72
Identities = 11/125 (8%), Positives = 31/125 (24%), Gaps = 22/125 (17%)
Query: 1747 FAVLDTDQLVIKPHDTWADLDNKFYEKVTALKKKGVKVTLAI----GGWNDSAGNKYSRL 1802
+A + +++ P D A + GV + + + L
Sbjct: 98 WAGSAGEGIIVPPSADVID----------ASHRNGVPILGNVFFPPTVYGGQLEWLEQML 147
Query: 1803 VNSQQARSKFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRA 1862
+ ++ + FDG ++ + + + + L+
Sbjct: 148 EQEEDGSFPLADKLLEVADYYGFDGWFINQQ--------TEGADEGTAEAMQAFLVYLQE 199
Query: 1863 AFNPH 1867
Sbjct: 200 QKPEG 204
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase,
wild type, viral protein; 2.38A {Sindbis virus} SCOP:
b.47.1.3 PDB: 1ld4_A 3j0f_A
Length = 264
Score = 38.6 bits (89), Expect = 0.018
Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Query: 1632 TEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVK 1691
Q ++ T + RP+ P + + K P KPKP K
Sbjct: 36 NGLASQIQQLTTAVSALVIGQATRPQNPRPRPPPRQKKQAP---KQPPKPKKPKPQEKKK 92
Query: 1692 PKPTTVKPKPVIPPSTKDEFK 1712
+P KP + K E
Sbjct: 93 KQPAKTKPGKRQRMALKLEAD 113
Score = 30.9 bits (69), Expect = 5.0
Identities = 10/49 (20%), Positives = 16/49 (32%)
Query: 1654 KRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPV 1702
++ K +PKP K +P KP + K + V
Sbjct: 70 RQKKQAPKQPPKPKKPKPQEKKKKQPAKTKPGKRQRMALKLEADRLFDV 118
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos
taurus} SCOP: i.9.1.1
Length = 390
Score = 38.7 bits (89), Expect = 0.022
Identities = 16/108 (14%), Positives = 29/108 (26%), Gaps = 6/108 (5%)
Query: 1601 PGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPT 1660
T+ T + + T P +P T++ + + P
Sbjct: 233 KALLEMQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSG 292
Query: 1661 TTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTK 1708
T + P T P P+P + P P+P +
Sbjct: 293 TWNPGRPEPGSAGTWNPGR----PEPGSAGTWNPGR--PEPGSAGTWN 334
Score = 35.6 bits (81), Expect = 0.20
Identities = 15/111 (13%), Positives = 28/111 (25%), Gaps = 1/111 (0%)
Query: 1598 GHGPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPK 1657
G + + P + ++ T RP+
Sbjct: 254 ARGDSVSQGTGLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPE 313
Query: 1658 PPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKP-KPTTVKPKPVIPPST 1707
P + + RP+P + P +P T P +P S+
Sbjct: 314 PGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNTGSS 364
Score = 33.3 bits (75), Expect = 0.96
Identities = 13/100 (13%), Positives = 22/100 (22%), Gaps = 6/100 (6%)
Query: 1614 PTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPIT 1673
P +S+ E + T + + +P +
Sbjct: 218 PREFKSQLQEAPLEWKALLEMQQTKMVLETFGGDGHARGDSVSQGTGLAPGSPRKPGTSS 277
Query: 1674 TIKPKPTTVKPKPTTTVKP------KPTTVKPKPVIPPST 1707
P + P + T P T P P S
Sbjct: 278 IGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSA 317
Score = 32.5 bits (73), Expect = 1.6
Identities = 19/113 (16%), Positives = 32/113 (28%), Gaps = 5/113 (4%)
Query: 1598 GHGPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRP- 1656
G PG + T + S S + EP + T P
Sbjct: 264 GLAPGSPRKPGTSSIGNVNPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPG 323
Query: 1657 --KPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
+P + + RP+P + P P+P + + P S+
Sbjct: 324 RPEPGSAGTWNPGRPEPGSAGTWNPGR--PEPGSAGTWNTGSSGSSSFRPDSS 374
Score = 32.5 bits (73), Expect = 2.0
Identities = 15/108 (13%), Positives = 29/108 (26%), Gaps = 5/108 (4%)
Query: 1600 GPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPP 1659
PG ++ + P E ++ T RP+P
Sbjct: 282 NPGSYGPGSSGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRPEPG 341
Query: 1660 TTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
+ + RP+P T + + +P + + P S
Sbjct: 342 SAGTWNPGRPEP-----GSAGTWNTGSSGSSSFRPDSSGHGNIRPSSP 384
Score = 32.1 bits (72), Expect = 2.5
Identities = 15/99 (15%), Positives = 25/99 (25%), Gaps = 3/99 (3%)
Query: 1600 GPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPP 1659
PG + + P E P + + + EP + T P P
Sbjct: 295 NPGRPEPGSAGTWNPGRPE--PGS-AGTWNPGRPEPGSAGTWNPGRPEPGSAGTWNPGRP 351
Query: 1660 TTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVK 1698
S T + +P + P T +
Sbjct: 352 EPGSAGTWNTGSSGSSSFRPDSSGHGNIRPSSPDWGTFR 390
>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis,
apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A
3u3v_A 3qo4_A
Length = 313
Score = 37.6 bits (86), Expect = 0.040
Identities = 23/211 (10%), Positives = 45/211 (21%), Gaps = 50/211 (23%)
Query: 1136 ETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSNIVR 1195
+C G + + CS + C+ ++
Sbjct: 48 SSCPVGTFTRHENGIEKCHDCSQPC-----------------PWPMIEKLPCAALTDREC 90
Query: 1196 FSLKPKDESCQEGEFAAYPSDCNKYQYCIWGSYQV-----------ASCSPGLYWNDKMK 1244
C G F + + C + C G C+ G + +
Sbjct: 91 T--------CPPGMFQSNAT-CAPHTVCPVGWGVRKKGTETEDVRCKQCARGTFSDVPSS 141
Query: 1245 TCDWPYRTKCK------QTSATTTSEQV--PKPTKKPTKPTKKPTTTTEYNPPEATTKPS 1296
T C T ++ V P+ + T T +
Sbjct: 142 VMKCKAYTDCLSQNLVVIKPGTKETDNVCGTLPSFSSSTSPSPGTAIFPRPEHMETHEVP 201
Query: 1297 TTTSTTTDSGAWTPNPTEWVWHPPTEPTTTH 1327
++T + N + P
Sbjct: 202 SSTYVPKGMNSTESNSS-----ASVRPKVLS 227
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune
system; NMR {Homo sapiens}
Length = 512
Score = 36.1 bits (83), Expect = 0.16
Identities = 17/166 (10%), Positives = 47/166 (28%), Gaps = 28/166 (16%)
Query: 1601 PGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTE-EPITTTTTSTTTTTKRPKPP 1659
Y ++++ P + + ++ ++ P + +++ T +P+
Sbjct: 189 RDSYYMTSSQLSTPLQQWRQGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAE 248
Query: 1660 TTTSTTTTRP---KPITTIKPKPTTVKPKPTTTVKPKPTTVKPKP-------VIPPSTKD 1709
+ + TT P + + K K + T P ++ P+ +D
Sbjct: 249 GSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQD 308
Query: 1710 EF-----KIVCYFTNWA-------WYRQSGG-----KYLPSDIDSD 1738
+ C+ W + + S+
Sbjct: 309 LWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSN 354
>3tiq_A Surface protein G; single-layer beta sheet, biofilm formation,
structu protein; 1.87A {Staphylococcus aureus subsp}
Length = 214
Score = 34.6 bits (78), Expect = 0.30
Identities = 21/118 (17%), Positives = 33/118 (27%), Gaps = 3/118 (2%)
Query: 1556 PDDDFFYFNANFTMNYWMKKGAPSRKLVMGVHPLLSTITEVLGHGPGGNYESTTEE--YK 1613
P + T G P K + + V +GP +E
Sbjct: 89 PGHRDEFDPKLPTGEKEEVPGKPGIKNPETGDVVRPPVDSVTKYGPVKGDSIVEKEEIPF 148
Query: 1614 PTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKP 1671
+ P + VT E ++ E+ ITT T T + + T P
Sbjct: 149 EKERKFNPDLAPGTEKVT-REGQKGEKTITTPTLKNPLTGEIISKGESKEEITKDPIN 205
>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine
kinase, glycoprotein, antigen:antibody complex, FAB
fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A
{Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*
Length = 624
Score = 35.4 bits (80), Expect = 0.30
Identities = 21/126 (16%), Positives = 33/126 (26%), Gaps = 23/126 (18%)
Query: 1134 IPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSNI 1193
C G P DC K +C P +L+N D + + SF +
Sbjct: 208 CHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMDVNPEGKYSFGATC 267
Query: 1194 VRFSLKPKDESCQEGEFAAYPSDCNKYQYCIWGSYQVASCSPGLY--WNDKMKTCDWPYR 1251
V C + V +C Y D ++ C
Sbjct: 268 V--------------------KKCPRNYVVTDHGSCVRACGADSYEMEEDGVRKCK-KCE 306
Query: 1252 TKCKQT 1257
C++
Sbjct: 307 GPCRKV 312
Score = 34.6 bits (78), Expect = 0.53
Identities = 19/145 (13%), Positives = 31/145 (21%), Gaps = 14/145 (9%)
Query: 1120 WTPITTTESTQEEYIPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLC 1179
W I +++ + G C + G Q + C
Sbjct: 140 WRDIVSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRC 199
Query: 1180 DWSYNVQCSFQSNIVRFSLKPKDESCQEGEFAAYPSDCNKYQYCIWGSYQVASCSPGLYW 1239
C C G SDC + + +C P + +
Sbjct: 200 RGKSPSDCCHNQ-------------CAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLY 246
Query: 1240 NDKMKTCDWPYRTKCKQTSATTTSE 1264
N D AT +
Sbjct: 247 NPTTYQMD-VNPEGKYSFGATCVKK 270
>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex,
transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A
{Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
Length = 501
Score = 34.9 bits (79), Expect = 0.35
Identities = 20/133 (15%), Positives = 35/133 (26%), Gaps = 8/133 (6%)
Query: 1134 IPETCVNGDYLPDPDDCRSFLIC--SHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQS 1191
+ ++ + + S C S N G K +C + +C +S
Sbjct: 144 VSSDFLSNMSMDFQNHLGSCQKCDPSCPNGSCWGAGEENCQKLTKIICAQQCSGRCRGKS 203
Query: 1192 NIVRFSLKPKDESCQEGEFAAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDWPYR 1251
C G SDC + + +C P + +N D
Sbjct: 204 PS-----DCCHNQCAAGCTGPRESDCLVCRKFRDEATCKDTCPPLMLYNPTTYQMD-VNP 257
Query: 1252 TKCKQTSATTTSE 1264
AT +
Sbjct: 258 EGKYSFGATCVKK 270
>1zy9_A Alpha-galactosidase; TM1192, struc genomics, joint center for
structural genomics, JCSG, prote structure initiative,
PSI, hydrolase; 2.34A {Thermotoga maritima} SCOP:
b.30.5.11 c.1.8.13
Length = 564
Score = 33.9 bits (77), Expect = 0.69
Identities = 13/135 (9%), Positives = 39/135 (28%), Gaps = 24/135 (17%)
Query: 1811 KFIAHVVNFILEHNFDGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLL 1870
++ + + + + + +D+ + + ++ + Q F I+ +R A +
Sbjct: 319 NWLFDLFSSLRKMGYRYFKIDFLFAGAVPGE-RKKNITPIQAFRKGIETIRKAVGEDSFI 377
Query: 1871 LS--AAVSPSKAVIDNAYDIPVMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTP 1928
L + + P+ +D I D W +
Sbjct: 378 LGCGSPLLPAVGCVD-----------GMRIG---PDTAPFWGEHIED-------NGAPAA 416
Query: 1929 TFNANYSLHYWVSHG 1943
+ ++ + H
Sbjct: 417 RWALRNAITRYFMHD 431
>2w91_A Endo-beta-N-acetylglucosaminidase D; hydrolase, N-glycan, secreted,
oxazoline, NAG-thiazoline, substrate-participation; 1.40A
{Streptococcus pneumoniae} PDB: 2w92_A*
Length = 653
Score = 34.0 bits (77), Expect = 0.69
Identities = 12/88 (13%), Positives = 21/88 (23%), Gaps = 11/88 (12%)
Query: 1412 KKGVKVSLAIGGWNDSLGGKYSRLVN----SATARQRFIEHVVKFLLKYQFDGLDLDWEY 1467
+ GV V + + R A +V Y +DG ++ E
Sbjct: 112 RNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYFINQET 171
Query: 1468 PTCWQVNCDAGPDSDKESFGLFVRELHQ 1495
E F+ +
Sbjct: 172 TG-------DLVKPLGEKMRQFMLYSKE 192
Score = 32.9 bits (74), Expect = 1.6
Identities = 25/198 (12%), Positives = 48/198 (24%), Gaps = 26/198 (13%)
Query: 1774 VTALKKKGVKVT-LAIGGWNDSAGNKY---SRLVNSQQARSKFIAHVVNFILEHNFDGLD 1829
+ A + GV V W++S ++ L +V+ + +DG
Sbjct: 107 IDAGHRNGVPVYGTLFFNWSNSIADQERFAEALKQDADGSFPIARKLVDMAKYYGYDGYF 166
Query: 1830 LDWEYPKCWQVDCKQGPASDKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAYDIP 1889
++ E D + + F KE A N YD
Sbjct: 167 INQETT----GDLVKPLGEKMRQFMLYSKEYAAKVNHPIKYSW-------------YDAM 209
Query: 1890 VMSENLDWISVMTYDYHGQWDKKTGHVAPMYALPNDTTPTFNANYSLHYWVSHGADRKKV 1949
+ + + + V N +Y++ G + V
Sbjct: 210 TYNYGRYHQDGLGEYNYQFMQPEGDKVPADNFFANFNWDKAKNDYTIATANWIGRNPYDV 269
Query: 1950 -----IFGMPMYGQSFTL 1962
+ Y
Sbjct: 270 FAGLELQQGGSYKTKVKW 287
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A
{Barmah forest virus}
Length = 253
Score = 33.5 bits (76), Expect = 0.75
Identities = 15/76 (19%), Positives = 23/76 (30%), Gaps = 6/76 (7%)
Query: 1633 EEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKP 1692
P Q ++ + ++ K +PK KPK T KPT K
Sbjct: 36 RGPSQLQQLVAALGALALQPKQKQKRAQK------KPKKTPPPKPKKTQKPKKPTQKKKS 89
Query: 1693 KPTTVKPKPVIPPSTK 1708
KP + +
Sbjct: 90 KPGKRMRNCMKIENDC 105
>3ghp_A Cellulosomal scaffoldin adaptor protein B; linker segments, beta
barrel, alpha helix, beta flaps, structural protein;
2.49A {Acetivibrio cellulolyticus}
Length = 227
Score = 32.9 bits (74), Expect = 0.83
Identities = 22/89 (24%), Positives = 29/89 (32%), Gaps = 7/89 (7%)
Query: 1625 STSTVVTTEEPEQTEEPITTTT------TSTTTTTKRPKPPTTTSTTTTRPKPITTIKPK 1678
+T V E+ E IT TT + +P S P T
Sbjct: 130 KKATTVVFEDSETMPNGITGTTLFNWYGNRIQSGYFVIQPGEINSAPIATATPTTKPTAF 189
Query: 1679 PTTVKPKPTTTVKPKPTTVKPKPVIPPST 1707
+T+ P T T P TT P P+T
Sbjct: 190 ASTM-PTVTLTPTPTATTTTTIPTAVPTT 217
Score = 30.6 bits (68), Expect = 4.8
Identities = 11/57 (19%), Positives = 16/57 (28%), Gaps = 1/57 (1%)
Query: 1643 TTTTTSTTTTTKRPKP-PTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVK 1698
+ PTT T P T+ P PT T P +++
Sbjct: 165 FVIQPGEINSAPIATATPTTKPTAFASTMPTVTLTPTPTATTTTTIPTAVPTTESLE 221
Score = 30.2 bits (67), Expect = 7.6
Identities = 23/103 (22%), Positives = 33/103 (32%), Gaps = 5/103 (4%)
Query: 1610 EEYKPT--SEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTT--KRPKPPTTTSTT 1665
E Y+ + EE+ V V+ + E T T TT +
Sbjct: 106 EVYRASESPEETGTLAVVGFKVLQKKATTVVFEDSETMPNGITGTTLFNWYGNRIQSGYF 165
Query: 1666 TTRPKPITTIKPKPTTVKPKPTTTVKPKPT-TVKPKPVIPPST 1707
+P I + T KPT PT T+ P P +T
Sbjct: 166 VIQPGEINSAPIATATPTTKPTAFASTMPTVTLTPTPTATTTT 208
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 32.2 bits (72), Expect = 0.88
Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 14/39 (35%)
Query: 1849 DKQGFADLIKELRAAFNPH--DLLLSAAVSPSKAVIDNA 1885
+KQ +K+L+A+ + D SA P+ A+ A
Sbjct: 18 EKQA----LKKLQASLKLYADD---SA---PALAI--KA 44
>1sr4_A CDT A, cytolethal distending toxin subunit A; bacterial, virulence,
DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis,
lectin; 2.00A {Haemophilus ducreyi} SCOP: b.42.2.1 PDB:
2f2f_A
Length = 206
Score = 32.6 bits (73), Expect = 1.3
Identities = 14/82 (17%), Positives = 26/82 (31%), Gaps = 4/82 (4%)
Query: 1240 NDKMKTCDWPYRTKCKQTSATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTT 1299
N +M P ++T Q K + +++ N ++PS
Sbjct: 2 NQRMNDYSQPESQSDLAPKSSTIQPQPQPLLSKTPSMSLNLLSSSGPNRQVLPSEPSNFM 61
Query: 1300 STTTDSGA----WTPNPTEWVW 1317
+ +GA W W+W
Sbjct: 62 TLMGQNGALLTVWALAKRNWLW 83
>2wd6_A Agglutinin receptor; cell adhesion, secreted, V-region, cell WALL, AG
I/II protei surface adhesin, peptidoglycan-anchor; 2.30A
{Streptococcus gordonii}
Length = 349
Score = 32.5 bits (73), Expect = 1.9
Identities = 8/62 (12%), Positives = 16/62 (25%), Gaps = 2/62 (3%)
Query: 1649 TTTTTKRPKPPTTTSTTTTRPKPIT--TIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPS 1706
++K ++ T PT + ++P P + P
Sbjct: 286 NMASSKSGNIWFAFNSNINAIGVPTKPVAPTAPTQPMYETEKPLEPAPVAPSYENEPTPP 345
Query: 1707 TK 1708
K
Sbjct: 346 VK 347
Score = 30.2 bits (67), Expect = 9.6
Identities = 9/52 (17%), Positives = 13/52 (25%)
Query: 1259 ATTTSEQVPKPTKKPTKPTKKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTP 1310
A ++ KP PT E P + + TP
Sbjct: 298 AFNSNINAIGVPTKPVAPTAPTQPMYETEKPLEPAPVAPSYENEPTPPVKTP 349
>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY
crystallography, neuregulins, heparin-binding, cell CY
signaling protein; HET: NAG NDG; 2.40A {Homo sapiens}
PDB: 3u2p_A*
Length = 617
Score = 32.3 bits (72), Expect = 2.1
Identities = 28/296 (9%), Positives = 65/296 (21%), Gaps = 32/296 (10%)
Query: 976 SDTDSDSCTSGEYYPVDGECGSYYRCILGTLKKESCAPGLHWNKVNKICDWPKSAKCEDK 1035
S C + + G C C +N + +AK
Sbjct: 215 SGPKDTDCFACMNFNDSGAC------------VTQCPQTFVYNPTTFQLEHNFNAKYTYG 262
Query: 1036 S-------LHWNKVNKICDWPKSAKCEDKSLHWNKVNKICDWPKSAKCEDKNMETPMKST 1088
+ ++ + C C + + P + C S
Sbjct: 263 AFCVKKCPHNFVVDSSSC----VRACPSSKMEVEENGIKMCKPCTDICPKACDGIGTGSL 318
Query: 1089 TESQSQELELVEDELTTIRTQRPTRPATSSWWTPITTTESTQEEYIPETCVNGDYLPDPD 1148
+Q+ + + T+ + + +
Sbjct: 319 MSAQTVDSS------NIDKFINCTKINGNLIFLVTGIHGDPYNAIEAIDPEKLNVFRTVR 372
Query: 1149 DCRSFL--ICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSNIVRFSLKPKDESCQ 1206
+ FL N+ S +L+ + L ++ Q I + E
Sbjct: 373 EITGFLNIQSWPPNMTDFSVFSNLVTIGGRVLYS-GLSLLILKQQGITSLQFQSLKEISA 431
Query: 1207 EGEFAAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDWPYRTKCKQTSATTT 1262
+ S+ Y W + + +++ C ++
Sbjct: 432 GNIYITDNSNLCYYHTINWTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLCSSDG 487
Score = 30.8 bits (68), Expect = 7.4
Identities = 19/160 (11%), Positives = 36/160 (22%), Gaps = 12/160 (7%)
Query: 1136 ETCVNGDYLPDPDDCRSFLICSH---GNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSN 1192
C G P DC C + C + ++N + ++N + ++ +
Sbjct: 208 RECAGGCSGPKDTDC---FACMNFNDSGACVTQCPQTFVYNPTTFQLEHNFNAKYTYGAF 264
Query: 1193 IVR---FSLKPKDESCQE---GEFAAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTC 1246
V+ + SC + K A G +T
Sbjct: 265 CVKKCPHNFVVDSSSCVRACPSSKMEVEENGIKMCKPCTDICPKACDGIGTGSLMSAQTV 324
Query: 1247 DWPYRTKCKQTSATTTSEQVPKPTKKPTKPTKKPTTTTEY 1286
D K + + E
Sbjct: 325 DSSNIDKFINCTKINGNLIFLVTGIHGDPYNAIEAIDPEK 364
>3izq_1 HBS1P, elongation factor 1 alpha-like protein; NO-GO mRNA decay,
ribosomal protein,hydrolase; 9.50A {Saccharomyces
cerevisiae}
Length = 611
Score = 32.4 bits (74), Expect = 2.2
Identities = 16/103 (15%), Positives = 26/103 (25%), Gaps = 3/103 (2%)
Query: 1604 NYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTK---RPKPPT 1660
+ EST E K T ++ K + + Q I+ + +
Sbjct: 66 DLESTLAELKKTLKKKKTPKKPIAAANGSANVTQKLANISISQQRPNDRLPDWLDEEESE 125
Query: 1661 TTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVI 1703
T + TTV KP P +
Sbjct: 126 GERNGEEANDEKTVQRYYKTTVPTKPKKPHDISAFVKSALPHL 168
>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor,
immunity, signaling transferase; HET: NAG NDG; 2.60A
{Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1
PDB: 3p11_A*
Length = 621
Score = 32.3 bits (72), Expect = 2.3
Identities = 33/293 (11%), Positives = 65/293 (22%), Gaps = 21/293 (7%)
Query: 980 SDSCTSGEYYPVDGECGSYYRCILGTLKKESCAPGLHWNKVNKICDWPKSAKCEDKSL-- 1037
D C G P D +C + C L +NK+ + K + +
Sbjct: 209 HDECAGGCSGPQDTDCFACRHFNDSGACVPRCPQPLVYNKLTFQLEPNPHTKYQYGGVCV 268
Query: 1038 -----HWNKVNKICDWPKSAKCEDKSLHWNKVNKICDWPKSAKCEDKNMETPMKSTTESQ 1092
++ C C + +K P C T S ++
Sbjct: 269 ASCPHNFVVDQTSC----VRACPPDKMEVDKNGLKMCEPCGGLCPKACEGTGSGSRFQTV 324
Query: 1093 SQELELVEDELTTIRTQRPTRPATSSW--WTPITTTESTQEEYIPETCVNGDYLPDPDDC 1150
T I + W I + + YL
Sbjct: 325 DSSNIDGFVNCTKILGNLDFLITGLNGDPWHKIPALDPEKLNVFRTVREITGYL------ 378
Query: 1151 RSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSNIVRFSLKPKDESCQEGEF 1210
+ ++ S +L + L + +++ N+ + E +
Sbjct: 379 --NIQSWPPHMHNFSVFSNLTTIGGRSLYNRGFSLLIMKNLNVTSLGFRSLKEISAGRIY 436
Query: 1211 AAYPSDCNKYQYCIWGSYQVASCSPGLYWNDKMKTCDWPYRTKCKQTSATTTS 1263
+ + W L D K ++
Sbjct: 437 ISANRQLCYHHSLNWTKVLRGPTEERLDIKHNRPRRDCVAEGKVCDPLCSSGG 489
Score = 31.2 bits (69), Expect = 5.3
Identities = 40/319 (12%), Positives = 75/319 (23%), Gaps = 19/319 (5%)
Query: 948 AKCTGLYQTNSVNSFPNWNIDNRRFSIDSDTDSDSCTSGEYYPVDGECGSYYRCILGTLK 1007
C N + + + ILG L
Sbjct: 284 RACPPDKMEVDKNGLKMCEPCGGLCPKACEGTGSGSRFQTVDSSNIDGFVNCTKILGNL- 342
Query: 1008 KESCAPGLHWNKVNKICDWPKSAKCEDKSLHWNKVNKICDWPKSAKCEDKSLHWNKVNKI 1067
+ GL+ + +KI + + + +S +
Sbjct: 343 -DFLITGLNGDPWHKIP--ALDPEKLNV-FRTVREITGYLNIQSWPPHMHNFSVFSNLTT 398
Query: 1068 CDWPKSAKCEDKNMETPMKSTTESQSQELELVEDELTTIRTQRPTRPATSSWWTPITTTE 1127
+ + T + L+ + I R S WT +
Sbjct: 399 IGGRSLYNRGFSLLIMKNLNVTSLGFRSLKEISAGRIYISANRQLCYHHSLNWTKVLRGP 458
Query: 1128 STQEEYIPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQC 1187
+ + I D + + C +CS G GP + + C
Sbjct: 459 TEERLDIKHNRPRRDCVAEGKVCDP--LCSSGGC--WGPGPGQCLSCRNYSRGGVCVTHC 514
Query: 1188 SFQSNIVRFSLKPK-----DESCQEGEFAA-----YPSDCNKYQYCIWGSYQVASCSPGL 1237
+F + R CQ E A C + + G + V+SC G+
Sbjct: 515 NFLNGEPREFAHEAECFSCHPECQPMEGTATCNGSGSDTCAQCAHFRDGPHCVSSCPHGV 574
Query: 1238 YWNDKMKTCDWPYRTKCKQ 1256
+ +C+
Sbjct: 575 LGAKGPIYKYPDVQNECRP 593
>3t3w_A Probable enoyl-COA hydratase; ssgcid, structural genomics, seattle ST
genomics center for infectious disease, lyase; 1.80A
{Mycobacterium thermoresistibile} PDB: 3ome_A
Length = 279
Score = 31.8 bits (73), Expect = 2.4
Identities = 9/47 (19%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 1506 AAVSP-----SKQVINAAYDVKALSESLDWISVMTYDYHGQWDKKTG 1547
A + P +K+ +N DV+ ++ + + HG +G
Sbjct: 218 AKMPPFALRQAKRAVNQTLDVQGFYAAIQSVFDIHQTGHGNAMSVSG 264
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid
cyclase fold, DDXXXXD motif, NDXXSXXXE MOT
methylisoborneol biosynthesis; HET: GST; 1.80A
{Streptomyces coelicolor} PDB: 3v1x_A*
Length = 433
Score = 32.0 bits (72), Expect = 2.9
Identities = 5/76 (6%), Positives = 10/76 (13%), Gaps = 2/76 (2%)
Query: 1635 PEQTEEPITTTTTSTTTTTKRPKPPTTTST--TTTRPKPITTIKPKPTTVKPKPTTTVKP 1692
+ + S P P P
Sbjct: 5 HHHHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPPDT 64
Query: 1693 KPTTVKPKPVIPPSTK 1708
+ ++ T
Sbjct: 65 VTGDSVLQRILRGPTG 80
Score = 30.5 bits (68), Expect = 8.4
Identities = 8/62 (12%), Positives = 15/62 (24%), Gaps = 4/62 (6%)
Query: 1650 TTTTKRPKPPTTTSTTTTRPKPITTIKPKPTT----VKPKPTTTVKPKPTTVKPKPVIPP 1705
++ + P ++ + + P T P P PP
Sbjct: 3 SSHHHHHHSSGLVPRGSHMVIPSASVTSAASDFLAALHPPVTVPDPAPPPPPAPAAGNPP 62
Query: 1706 ST 1707
T
Sbjct: 63 DT 64
>3vbh_B EV71, genome polyprotein, capsid protein VP2; hand-foot-and-mouth
disease, enterovirus uncoating, P factor, adaptor-sensor;
HET: SPH; 2.30A {Human enterovirus 71} PDB: 3vbf_B*
3vbs_B* 4aed_B* 3vbo_B 3vbr_B 3vbu_B 4agy_B 4agx_B
Length = 245
Score = 31.3 bits (71), Expect = 3.0
Identities = 14/66 (21%), Positives = 17/66 (25%), Gaps = 4/66 (6%)
Query: 1257 TSATTTSEQVPKPTKKPTKPT--KKPTTTTEYNPPEATTKPSTTTSTTTDSGAWTPNPTE 1314
S TT E P+ T P S T D+ W +
Sbjct: 11 NSTITTQEAANIIVGYGEWPSYCSDSDATAVDKPTRPD--VSVNRFYTLDTKLWEKSSKG 68
Query: 1315 WVWHPP 1320
W W P
Sbjct: 69 WYWKFP 74
>3uek_A Poly(ADP-ribose) glycohydrolase; mammalian PArg, macrodomain; 1.95A
{Rattus norvegicus} PDB: 3uel_A*
Length = 588
Score = 31.7 bits (71), Expect = 3.1
Identities = 17/131 (12%), Positives = 36/131 (27%), Gaps = 15/131 (11%)
Query: 1604 NYESTTEEYKPTSEESKP-TTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTT 1662
N S + + + + K + ++ V + ++ +E + PP
Sbjct: 1 NSSSLNVDGRSSKQHGKRDSKITDHFVRIPKSEDKRKEQCEVRHQRAERKIPKYVPPNLP 60
Query: 1663 STTTTRPKPITTIKPKPT------TVKPKPTTTV--------KPKPTTVKPKPVIPPSTK 1708
PI ++ P ++P + TV + P
Sbjct: 61 PDKKWLGTPIEEMRKMPRCGVRLPLLRPSASHTVTVRVDLLRAGEVPKPFPTHYKDLWDN 120
Query: 1709 DEFKIVCYFTN 1719
K+ C N
Sbjct: 121 KHVKMPCSEQN 131
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure
initiative, MIDW center for structural genomics, MCSG;
1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Length = 125
Score = 30.2 bits (67), Expect = 3.3
Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 6/37 (16%)
Query: 1760 HDTWADLDNKFYEKVTALKKKGVKVTLAIGGWNDSAG 1796
WA +D + + + L + L + GW DSAG
Sbjct: 69 GRLWAPVDAFYMDHLEEL------IVLDLPGWRDSAG 99
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin,
spectrin repeat, three helix bundle, ANKY binding,
disease mutation, structural protein, ZU5 sandwich; 2.75A
{Homo sapiens} PDB: 3kbu_A
Length = 326
Score = 31.5 bits (71), Expect = 3.9
Identities = 13/83 (15%), Positives = 29/83 (34%), Gaps = 8/83 (9%)
Query: 2228 DLDEQELVIRSHNN-KLDLEQGFYEKITKFNERGIQVILA-------IGGWSDSRSDKYS 2279
D D L+ + + E++ N ++I A I W D ++ ++
Sbjct: 141 DFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWA 200
Query: 2280 RLVNDIPARRNFVRHVTEFLEFY 2302
L+ I R + + ++
Sbjct: 201 DLLELIDTRMQLLAASYDLHRYF 223
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C
region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC;
2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
b.1.1.2
Length = 444
Score = 31.0 bits (70), Expect = 5.0
Identities = 23/131 (17%), Positives = 35/131 (26%), Gaps = 21/131 (16%)
Query: 1603 GNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTT 1662
G+ S + + T S+ TV ++ P Q+ T P ++T
Sbjct: 162 GSLSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPSQSI------------TCNVAHPASST 209
Query: 1663 STTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDEFKIVCYFT---- 1718
TIKP P P P P PK + C
Sbjct: 210 KVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIKDVLMISLSPIVTCVVVDVSE 269
Query: 1719 -----NWAWYR 1724
+W+
Sbjct: 270 DDPDVQISWFV 280
>3ecq_A Protein SPR0328, endo-alpha-N-acetylgalactosaminidase; distorted
(beta/alpha)8 (TIM) barrel glycoside hydrolase DOM WALL;
2.90A {Streptococcus pneumoniae}
Length = 1531
Score = 31.4 bits (70), Expect = 5.1
Identities = 19/82 (23%), Positives = 27/82 (32%), Gaps = 6/82 (7%)
Query: 1623 TVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKP------PTTTSTTTTRPKPITTIK 1676
++S + T P + T + + PK P T T + + K
Sbjct: 2 SMSVQSGSTANLPADLATALATAKENDGHDFEAPKVGEDQGSPEVTDGPKTEEELLALEK 61
Query: 1677 PKPTTVKPKPTTTVKPKPTTVK 1698
KP KPK KP T K
Sbjct: 62 EKPAEEKPKEDKPAAAKPETPK 83
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor,
chromophore, glycoprotein, lipoprotein, membrane,
palmitate phosphorylation; HET: BOG RET PLM TWT PC1;
2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Length = 448
Score = 31.0 bits (70), Expect = 5.2
Identities = 19/133 (14%), Positives = 37/133 (27%), Gaps = 16/133 (12%)
Query: 1580 RKLVMGVHPLLSTITEVLGHGPGGNYESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTE 1639
R+ + P + T + + ++ TE S ++ P+ + ++ +
Sbjct: 323 REAISQTFPWVLTCCQFDDKETEDDKDAETEIPAGESSDAAPSADAAQMKEMMAMMQKMQ 382
Query: 1640 EPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKP 1699
+ PP P P+ + P P P P
Sbjct: 383 QQQAAYPPQGYA-----PPPQGY--------PPQGYPPQGYPPQGYPPQGYPPPPQGAPP 429
Query: 1700 K---PVIPPSTKD 1709
+ P PP D
Sbjct: 430 QGAPPAAPPQGVD 442
>2fea_A 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase;
2633731, structural genomics, joint center for structural
GE JCSG; HET: MSE; 2.00A {Bacillus subtilis} SCOP:
c.108.1.20
Length = 236
Score = 30.5 bits (69), Expect = 5.5
Identities = 14/97 (14%), Positives = 26/97 (26%), Gaps = 13/97 (13%)
Query: 1766 LDNKFYEKVTALKKKGVKVTLAIGGWNDSAGNKYSRLVNSQQARSKFIAHVVNFILEHNF 1825
+ F E V + + + + GG V + +
Sbjct: 78 IREGFREFVAFINEHEIPFYVISGGM--------DFFVYPLLEGIVEKDRIYCNHASFDN 129
Query: 1826 DGLDLDWEYPKCWQVDCKQGPASDKQGFADLIKELRA 1862
D + +DW + + C K +I EL
Sbjct: 130 DYIHIDWPHS--CKGTCSNQCGCCK---PSVIHELSE 161
>1uyj_A Epsilon-toxin; beta pore forming toxin; 2.6A {Clostridium
perfringens} SCOP: f.8.1.2
Length = 296
Score = 30.8 bits (68), Expect = 5.6
Identities = 29/202 (14%), Positives = 58/202 (28%), Gaps = 17/202 (8%)
Query: 1606 ESTTEEYKPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTT 1665
+ ++ + + ++ T + + + + + P T S TT+ T T++
Sbjct: 99 KLKSQSFTCKNTDTVTATTTHTVGTSIQATAKFTVPFNETGVSLTTSYSFANTNTNTNSK 158
Query: 1666 TTRPKPITTIKPKPTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDEFKIVCYFTNWAWYRQ 1725
+ + V T V V + K K+V + W
Sbjct: 159 EIT----HNVPSQDILVPANTTVEVIAYLKKV--------NVKGNVKLVGQVSGSEWGEI 206
Query: 1726 SGGKYLPSDIDSDLCTHVIYGFAVLDTDQLVIKPHDTW-----ADLDNKFYEKVTALKKK 1780
P D + + + + + I + +L K T ++
Sbjct: 207 PSYLAFPRDGYKFSLSDTVNKSDLNEDGTININGKGNYSAVMGDELIVKVRNLNTNNVQE 266
Query: 1781 GVKVTLAIGGWNDSAGNKYSRL 1802
V NDS KY L
Sbjct: 267 YVIPVDKKEKSNDSNIVKYRSL 288
>3k1d_A 1,4-alpha-glucan-branching enzyme; mycobacterium tuberculosis
H37RV, mesophilic human pathogen, RV1326C gene, glycosyl
transferase; 2.33A {Mycobacterium tuberculosis}
Length = 722
Score = 31.1 bits (71), Expect = 5.9
Identities = 12/35 (34%), Positives = 19/35 (54%), Gaps = 4/35 (11%)
Query: 569 HVEFMSLMSYDYHGAWEG--ITGLVSPLNSRPGEP 601
HVE + + + + G+W G +T +P SR G P
Sbjct: 280 HVELLPVAEHPFAGSW-GYQVTSYYAP-TSRFGTP 312
>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl,
rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling
protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 3nzy_B
Length = 216
Score = 30.2 bits (67), Expect = 6.6
Identities = 20/128 (15%), Positives = 32/128 (25%), Gaps = 45/128 (35%)
Query: 1134 IPETCVNGDYLPDPDDCRSFLICSHGNLLKQSCGPSLLWNAKKKLCDWSYNVQCSFQSNI 1193
+ C + R C G L C P+ + C
Sbjct: 29 VTPPCTQERH--YEHLGRCCSRCEPGKYLSSKCTPTS-------------DSVC------ 67
Query: 1194 VRFSLKPKDESCQEGEFAAYPSD---CNKYQYCIWGSYQVAS------------CSPGLY 1238
C E+ ++ C ++ C G VA C+ G +
Sbjct: 68 ---------LPCGPDEYLDTWNEEDKCLLHKVCDAGKALVAVDPGNHTAPRRCACTAGYH 118
Query: 1239 WNDKMKTC 1246
WN + C
Sbjct: 119 WNSDCECC 126
>1eys_C Photosynthetic reaction center; membrane protein complex, electron
transport; HET: BGL BCL BPH MQ8 HEM CRT LDA PEF; 2.20A
{Thermochromatium tepidum} SCOP: a.138.1.2
Length = 382
Score = 30.6 bits (68), Expect = 7.4
Identities = 10/71 (14%), Positives = 21/71 (29%)
Query: 1613 KPTSEESKPTTVSTSTVVTTEEPEQTEEPITTTTTSTTTTTKRPKPPTTTSTTTTRPKPI 1672
++E+ P + S E E + +P + + P P+
Sbjct: 311 TAVTQEALPGSAPASEAAPAAATEAAPEAPAQEVPAAEAVPAAAEPGAAEAAGSVEPAPV 370
Query: 1673 TTIKPKPTTVK 1683
+ P P +
Sbjct: 371 EEVAPAPAAQR 381
>1m7x_A 1,4-alpha-glucan branching enzyme; alpha/beta barrel, beta
sandwich, transferase; 2.30A {Escherichia coli} SCOP:
b.1.18.2 b.71.1.1 c.1.8.1 PDB: 3o7y_A* 3o7z_A*
Length = 617
Score = 30.6 bits (70), Expect = 7.7
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
Query: 569 HVEFMSLMSYDYHGAWEG--ITGLVSPLNSRPGEP 601
H+E + + + + G+W G TGL +P R G
Sbjct: 172 HLELLPINEHPFDGSW-GYQPTGLYAP-TRRFGTR 204
>2h6o_A Major outer envelope glycoprotein GP350; viral protein; HET: NAG MAN
BMA NDG GAL FUC; 3.50A {Human herpesvirus 4}
Length = 470
Score = 30.3 bits (67), Expect = 8.5
Identities = 20/55 (36%), Positives = 25/55 (45%)
Query: 1642 ITTTTTSTTTTTKRPKPPTTTSTTTTRPKPITTIKPKPTTVKPKPTTTVKPKPTT 1696
IT T T+ TTTT + +TTT P TT P T P++T P T
Sbjct: 405 ITRTATNATTTTHKVIFSKAPESTTTSPTLNTTGFAAPNTTTGLPSSTHVPTNLT 459
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 30.0 bits (66), Expect = 8.7
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 5/92 (5%)
Query: 1624 VSTSTVVTTEEPEQTEEPITTTTTSTTTTTKR-----PKPPTTTSTTTTRPKPITTIKPK 1678
+T + EPE T + + R P PP T + + + I ++
Sbjct: 5 AATPEIRVNHEPEPAGGATPGATLPKSPSQLRKGPPVPPPPKHTPSKEVKQEQILSLFED 64
Query: 1679 PTTVKPKPTTTVKPKPTTVKPKPVIPPSTKDE 1710
+ TT +P + P + E
Sbjct: 65 TFVPEISVTTPSQPAEASEVAGGTQPAAGAQE 96
>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase;
HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}
Length = 486
Score = 30.2 bits (67), Expect = 8.9
Identities = 18/124 (14%), Positives = 31/124 (25%), Gaps = 17/124 (13%)
Query: 978 TDSDSCTSGEYYPVDGEC------GSYYRCILGTLKKESCAPGLHWNKVNKICDWPKSAK 1031
D C + + +DG C Y+ + C + C +
Sbjct: 220 DDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDL------HHKCKNSRRQG 273
Query: 1032 CEDKSLHWNKVNKIC-----DWPKSAKCEDKSLHWNKVNKICDWPKSAKCEDKNMETPMK 1086
C +H NK C + C KV + + K+ E
Sbjct: 274 CHQYVIHNNKCIPECPSGYTMNSSNLLCTPCLGPCPKVCHLLEGEKTIDSVTSAQELRGC 333
Query: 1087 STTE 1090
+
Sbjct: 334 TVIN 337
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for
structural genomics, J protein structure initiative,
PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga
maritima} SCOP: c.1.8.15
Length = 309
Score = 30.2 bits (67), Expect = 9.9
Identities = 20/172 (11%), Positives = 52/172 (30%), Gaps = 26/172 (15%)
Query: 1753 DQLVIKPHDTWADLDNKFYEKVTALKKKGVKVT--LAIG-------GWNDSAGNKY---- 1799
+ VI ++ E++ + GV + IG W +S
Sbjct: 41 EIAVIDYSKDGSESGEYSPEEIKIMVDAGVVPVAYVNIGQAEDYRFYWKESWYTNTPEWL 100
Query: 1800 ---------SRLVN-SQQARSKFIAHVVNFILEHNFDGLDLDW-EYPKCWQVDCKQGPAS 1848
+ V + + ++ +++ F G+ LD + + W + S
Sbjct: 101 GEEDPAWPGNYFVKYWYNEWKEIVFSYLDRVIDQGFKGIYLDRIDSFEYWAQEGVISRRS 160
Query: 1849 DKQGFADLIKELRAAFNPHDLLLSAAVSPSKAVIDNAYDIPVMSENLDWISV 1900
+ + + E+ + + ++D D ++ + +V
Sbjct: 161 AARKMINFVLEIAEYVRERKPDMLIIPQNGENILDF--DDGQLASTVSGWAV 210
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.317 0.134 0.421
Gapped
Lambda K H
0.267 0.0741 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 37,523,251
Number of extensions: 2296322
Number of successful extensions: 6421
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5492
Number of HSP's successfully gapped: 420
Length of query: 2417
Length of database: 6,701,793
Length adjustment: 109
Effective length of query: 2308
Effective length of database: 3,658,404
Effective search space: 8443596432
Effective search space used: 8443596432
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 66 (29.2 bits)