Your job contains 1 sequence.
>psy445
MLSMNDPSLTDRCAQLSGMLPFDGIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLS
RESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIATGTNIQLVFNPSISANSYHMAPP
SRECDFDKEHGKSVSRFNNALA
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy445
(142 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0013753 - symbol:Bgb "Big brother" species:7227 "D... 468 1.9e-44 1
FB|FBgn0013755 - symbol:Bro "Brother" species:7227 "Droso... 391 2.7e-36 1
UNIPROTKB|E1B9S8 - symbol:CBFB "Uncharacterized protein" ... 316 2.4e-28 1
ZFIN|ZDB-GENE-980526-440 - symbol:cbfb "core-binding fact... 316 2.4e-28 1
UNIPROTKB|Q13951 - symbol:CBFB "Core-binding factor subun... 310 1.0e-27 1
MGI|MGI:99851 - symbol:Cbfb "core binding factor beta" sp... 310 1.0e-27 1
RGD|620493 - symbol:Cbfb "core-binding factor, beta subun... 310 1.0e-27 1
UNIPROTKB|D4A1S4 - symbol:Cbfb "Protein Cbfb" species:101... 310 1.0e-27 1
UNIPROTKB|H3BSC0 - symbol:CBFB "Core-binding factor subun... 239 3.5e-20 1
UNIPROTKB|D4ADR8 - symbol:Cbfb "Protein Cbfb" species:101... 239 3.5e-20 1
UNIPROTKB|E2REW4 - symbol:CBFB "Uncharacterized protein" ... 212 2.5e-17 1
UNIPROTKB|J3KTD8 - symbol:CBFB "Core-binding factor subun... 159 1.0e-11 1
WB|WBGene00000272 - symbol:bro-1 species:6239 "Caenorhabd... 99 8.5e-05 1
>FB|FBgn0013753 [details] [associations]
symbol:Bgb "Big brother" species:7227 "Drosophila
melanogaster" [GO:0003713 "transcription coactivator activity"
evidence=ISS;IDA;IPI] [GO:0005634 "nucleus" evidence=NAS;IDA]
[GO:0016513 "core-binding factor complex" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0046982 "protein
heterodimerization activity" evidence=TAS] [GO:0008134
"transcription factor binding" evidence=TAS] [GO:0035206
"regulation of hemocyte proliferation" evidence=IMP]
InterPro:IPR003417 Pfam:PF02312 GO:GO:0005634 EMBL:AE014296
GO:GO:0006357 GO:GO:0003713 GO:GO:0046982 GO:GO:0008134
GO:GO:0035206 EMBL:U22177 EMBL:AY058784 RefSeq:NP_477065.3
UniGene:Dm.4101 ProteinModelPortal:Q24040 SMR:Q24040 DIP:DIP-22891N
IntAct:Q24040 MINT:MINT-777077 STRING:Q24040
EnsemblMetazoa:FBtr0072758 GeneID:38198 KEGG:dme:Dmel_CG7959
CTD:107447 FlyBase:FBgn0013753 eggNOG:NOG245525
GeneTree:ENSGT00390000018132 InParanoid:Q24040 OMA:KECDFDK
OrthoDB:EOG4PZGPP PhylomeDB:Q24040 GenomeRNAi:38198 NextBio:807472
Bgee:Q24040 GermOnline:CG7959 Gene3D:2.40.250.10 PANTHER:PTHR10276
SUPFAM:SSF50723 Uniprot:Q24040
Length = 213
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 91/120 (75%), Positives = 102/120 (85%)
Query: 14 AQLSGMLPFDGIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDR 73
A L+ M+P+D IGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTG+R+R
Sbjct: 5 AALANMIPYDTIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGYRER 64
Query: 74 PQEERQVRFQNGCREGHTEIAFIATGTNIQLVFNPSISANSY-HMAPPSRECDFDKEHGK 132
EERQVRF NGCREGHTE +F+A+GTN+QLVFN + N Y H +ECDFDKEHGK
Sbjct: 65 SIEERQVRFMNGCREGHTEASFVASGTNLQLVFNAN--QNPYLH----DKECDFDKEHGK 118
>FB|FBgn0013755 [details] [associations]
symbol:Bro "Brother" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISS;IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0016513 "core-binding factor complex"
evidence=ISS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0048749 "compound eye
development" evidence=TAS] [GO:0008134 "transcription factor
binding" evidence=TAS] [GO:0046982 "protein heterodimerization
activity" evidence=TAS] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR003417 Pfam:PF02312
GO:GO:0005634 EMBL:AE014296 GO:GO:0006357 GO:GO:0003713
GO:GO:0046982 GO:GO:0008134 GO:GO:0035206 GO:GO:0048749
eggNOG:NOG245525 GeneTree:ENSGT00390000018132 Gene3D:2.40.250.10
PANTHER:PTHR10276 SUPFAM:SSF50723 EMBL:U22176 RefSeq:NP_477066.2
UniGene:Dm.6279 ProteinModelPortal:Q24039 SMR:Q24039 IntAct:Q24039
MINT:MINT-875481 STRING:Q24039 PaxDb:Q24039
EnsemblMetazoa:FBtr0072760 GeneID:38202 KEGG:dme:Dmel_CG7960
CTD:38202 FlyBase:FBgn0013755 InParanoid:Q24039 OMA:ERRMRFV
OrthoDB:EOG4905S5 PhylomeDB:Q24039 GenomeRNAi:38202 NextBio:807494
Bgee:Q24039 GermOnline:CG7960 Uniprot:Q24039
Length = 213
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 73/120 (60%), Positives = 97/120 (80%)
Query: 14 AQLSGMLP-FDGIGLYEQPKPRFIFKMPRVVPDQKSKFESDELFRRLSRESEVRYTGFRD 72
A ++GM+P ++ + +YEQPKPRFIFKMPRVVPDQ+SKF+SDELFRRLSRESEVRYTG+R+
Sbjct: 11 AAMNGMIPPYEAMAMYEQPKPRFIFKMPRVVPDQRSKFDSDELFRRLSRESEVRYTGYRE 70
Query: 73 RPQEERQVRFQNGCREGHTEIAFIATGTNIQLVFNPSISANSYHMAPPSRECDFDKEHGK 132
R EER++RF N CR+G+ EI+ +A+GTN+QL FN + N Y ++CDF++E GK
Sbjct: 71 RAMEERRMRFVNDCRKGYAEISMVASGTNLQLYFNAN--HNPYAQ---EQDCDFERERGK 125
>UNIPROTKB|E1B9S8 [details] [associations]
symbol:CBFB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060216 "definitive hemopoiesis" evidence=IEA]
[GO:0048469 "cell maturation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0030099 "myeloid cell differentiation"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001649
"osteoblast differentiation" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 GO:GO:0005634 GO:GO:0045944
GO:GO:0003713 GO:GO:0001649 GO:GO:0048469
GeneTree:ENSGT00390000018132 OMA:KECDFDK Gene3D:2.40.250.10
PANTHER:PTHR10276 SUPFAM:SSF50723 GO:GO:0030099 GO:GO:0060216
GO:GO:0030098 CTD:865 EMBL:DAAA02046679 IPI:IPI00695771
RefSeq:NP_001178364.1 UniGene:Bt.103809 Ensembl:ENSBTAT00000021434
GeneID:614678 KEGG:bta:614678 NextBio:20899226 Uniprot:E1B9S8
Length = 182
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 61/95 (64%), Positives = 74/95 (77%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE DF++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDFEREAGK 94
>ZFIN|ZDB-GENE-980526-440 [details] [associations]
symbol:cbfb "core-binding factor, beta subunit"
species:7955 "Danio rerio" [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IC] [GO:0000988 "protein binding transcription factor
activity" evidence=IC] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0016513 "core-binding factor complex"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IPI] [GO:0030018
"Z disc" evidence=IDA] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0045214 "sarcomere organization" evidence=IMP]
[GO:0048769 "sarcomerogenesis" evidence=IMP] InterPro:IPR003417
Pfam:PF02312 ZFIN:ZDB-GENE-980526-440 GO:GO:0030018 GO:GO:0006355
GO:GO:0003713 GO:GO:0060047 GO:GO:0045214 eggNOG:NOG245525
GeneTree:ENSGT00390000018132 OMA:KECDFDK Gene3D:2.40.250.10
PANTHER:PTHR10276 SUPFAM:SSF50723 GO:GO:0000988 GO:GO:0048769
CTD:865 HOGENOM:HOG000008040 HOVERGEN:HBG000541 OrthoDB:EOG4933K1
EMBL:AL953894 EMBL:BX001001 EMBL:AF278758 EMBL:BC162159
IPI:IPI00485263 RefSeq:NP_954679.1 UniGene:Dr.83043 HSSP:Q13951
SMR:Q98U16 STRING:Q98U16 Ensembl:ENSDART00000059961 GeneID:30744
KEGG:dre:30744 InParanoid:Q98U16 NextBio:20807091 GO:GO:0016513
Uniprot:Q98U16
Length = 187
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 58/94 (61%), Positives = 71/94 (75%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRECDFDKEHGK 132
GTN+ L F P+ AP DF++E GK
Sbjct: 61 GTNLSLQFFPANLHGDQRQAPTREYVDFERETGK 94
>UNIPROTKB|Q13951 [details] [associations]
symbol:CBFB "Core-binding factor subunit beta" species:9606
"Homo sapiens" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0030098
"lymphocyte differentiation" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0060216 "definitive hemopoiesis" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=TAS] InterPro:IPR003417 Pfam:PF02312
GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
GO:GO:0003713 GO:GO:0006366
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0001649
EMBL:CH471092 GO:GO:0048469 eggNOG:NOG245525 OMA:KECDFDK
Gene3D:2.40.250.10 PANTHER:PTHR10276 SUPFAM:SSF50723 GO:GO:0030099
GO:GO:0060216 GO:GO:0030098 Orphanet:98829 EMBL:AF294326
EMBL:BT006862 EMBL:AK290462 EMBL:BC018509 EMBL:L20298
IPI:IPI00016746 IPI:IPI00024871 PIR:A56840 PIR:I59579
RefSeq:NP_001746.1 RefSeq:NP_074036.1 UniGene:Hs.460988 PDB:1CL3
PDB:1E50 PDB:1H9D PDBsum:1CL3 PDBsum:1E50 PDBsum:1H9D
ProteinModelPortal:Q13951 SMR:Q13951 IntAct:Q13951
MINT:MINT-1414765 STRING:Q13951 PhosphoSite:Q13951 DMDM:2498753
PaxDb:Q13951 PeptideAtlas:Q13951 PRIDE:Q13951 DNASU:865
Ensembl:ENST00000290858 Ensembl:ENST00000412916 GeneID:865
KEGG:hsa:865 UCSC:uc002era.3 UCSC:uc002erb.3 CTD:865
GeneCards:GC16P067063 HGNC:HGNC:1539 HPA:HPA038852 MIM:121360
neXtProt:NX_Q13951 PharmGKB:PA26114 HOGENOM:HOG000008040
HOVERGEN:HBG000541 InParanoid:Q13951 OrthoDB:EOG4933K1
PhylomeDB:Q13951 ChEMBL:CHEMBL1615386 ChiTaRS:CBFB
EvolutionaryTrace:Q13951 GenomeRNAi:865 NextBio:3608 Bgee:Q13951
CleanEx:HS_CBFB Genevestigator:Q13951 GermOnline:ENSG00000067955
Uniprot:Q13951
Length = 182
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE D ++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDLEREAGK 94
>MGI|MGI:99851 [details] [associations]
symbol:Cbfb "core binding factor beta" species:10090 "Mus
musculus" [GO:0001503 "ossification" evidence=IMP] [GO:0001649
"osteoblast differentiation" evidence=IMP] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0030098 "lymphocyte
differentiation" evidence=IMP] [GO:0030099 "myeloid cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0048469 "cell maturation" evidence=IMP] [GO:0060216 "definitive
hemopoiesis" evidence=IMP] InterPro:IPR003417 Pfam:PF02312
MGI:MGI:99851 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0003713 GO:GO:0001649 GO:GO:0048469 eggNOG:NOG245525
GeneTree:ENSGT00390000018132 OMA:KECDFDK Gene3D:2.40.250.10
PANTHER:PTHR10276 SUPFAM:SSF50723 GO:GO:0030099 PDB:1IO4
PDBsum:1IO4 GO:GO:0060216 GO:GO:0030098 CTD:865
HOGENOM:HOG000008040 HOVERGEN:HBG000541 OrthoDB:EOG4933K1
ChiTaRS:CBFB EMBL:D14572 EMBL:D14571 EMBL:D14570 EMBL:D14569
EMBL:L03305 EMBL:L03306 EMBL:L03279 EMBL:AK089094 EMBL:BC006763
EMBL:BC026749 EMBL:BC040752 IPI:IPI00116450 IPI:IPI00229487
IPI:IPI00229488 IPI:IPI00229489 PIR:A46107 PIR:B48124
RefSeq:NP_001154928.1 RefSeq:NP_001154929.1 RefSeq:NP_001154930.1
RefSeq:NP_071704.3 UniGene:Mm.2018 PDB:1ILF PDB:2JHB PDBsum:1ILF
PDBsum:2JHB ProteinModelPortal:Q08024 SMR:Q08024 IntAct:Q08024
STRING:Q08024 PhosphoSite:Q08024 PaxDb:Q08024 PRIDE:Q08024
Ensembl:ENSMUST00000052209 Ensembl:ENSMUST00000109392
Ensembl:ENSMUST00000109394 Ensembl:ENSMUST00000109395 GeneID:12400
KEGG:mmu:12400 UCSC:uc009nbp.2 UCSC:uc009nbq.2 UCSC:uc009nbr.2
UCSC:uc012gjd.1 InParanoid:Q08024 EvolutionaryTrace:Q08024
NextBio:281162 Bgee:Q08024 CleanEx:MM_CBFB Genevestigator:Q08024
Uniprot:Q08024
Length = 187
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE D ++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDLEREAGK 94
>RGD|620493 [details] [associations]
symbol:Cbfb "core-binding factor, beta subunit" species:10116
"Rattus norvegicus" [GO:0001503 "ossification" evidence=ISO]
[GO:0001649 "osteoblast differentiation" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0030098 "lymphocyte
differentiation" evidence=IEA;ISO] [GO:0030099 "myeloid cell
differentiation" evidence=IEA;ISO] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0048469 "cell maturation" evidence=IEA;ISO] [GO:0060216
"definitive hemopoiesis" evidence=IEA;ISO] InterPro:IPR003417
Pfam:PF02312 RGD:620493 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0003700 GO:GO:0003713 GO:GO:0001649 GO:GO:0048469
eggNOG:NOG245525 GeneTree:ENSGT00390000018132 Gene3D:2.40.250.10
PANTHER:PTHR10276 SUPFAM:SSF50723 GO:GO:0030099 GO:GO:0060216
GO:GO:0030098 CTD:865 HOGENOM:HOG000008040 HOVERGEN:HBG000541
OrthoDB:EOG4933K1 EMBL:BC081946 IPI:IPI00471834
RefSeq:NP_001013209.1 UniGene:Rn.7308 SMR:Q66HA7 STRING:Q66HA7
Ensembl:ENSRNOT00000019656 GeneID:361391 KEGG:rno:361391
UCSC:RGD:620493 InParanoid:Q66HA7 NextBio:676140
Genevestigator:Q66HA7 Uniprot:Q66HA7
Length = 182
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE D ++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDLEREAGK 94
>UNIPROTKB|D4A1S4 [details] [associations]
symbol:Cbfb "Protein Cbfb" species:10116 "Rattus
norvegicus" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 RGD:620493 GO:GO:0005634
GO:GO:0003713 Gene3D:2.40.250.10 PANTHER:PTHR10276 SUPFAM:SSF50723
IPI:IPI00567498 Ensembl:ENSRNOT00000048599 ArrayExpress:D4A1S4
Uniprot:D4A1S4
Length = 154
Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 60/95 (63%), Positives = 73/95 (76%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE D ++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDLEREAGK 94
>UNIPROTKB|H3BSC0 [details] [associations]
symbol:CBFB "Core-binding factor subunit beta" species:9606
"Homo sapiens" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 GO:GO:0005634 GO:GO:0003713
Gene3D:2.40.250.10 PANTHER:PTHR10276 SUPFAM:SSF50723 EMBL:AC009084
EMBL:AC074143 HGNC:HGNC:1539 ChiTaRS:CBFB Ensembl:ENST00000564034
Bgee:H3BSC0 Uniprot:H3BSC0
Length = 93
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFI 96
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EI ++
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIVYL 58
>UNIPROTKB|D4ADR8 [details] [associations]
symbol:Cbfb "Protein Cbfb" species:10116 "Rattus
norvegicus" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 RGD:620493 GO:GO:0005634
GO:GO:0003713 Gene3D:2.40.250.10 PANTHER:PTHR10276 SUPFAM:SSF50723
IPI:IPI00559199 Ensembl:ENSRNOT00000045321 ArrayExpress:D4ADR8
Uniprot:D4ADR8
Length = 147
Score = 239 (89.2 bits), Expect = 3.5e-20, P = 3.5e-20
Identities = 41/58 (70%), Positives = 51/58 (87%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFI 96
MPRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EI ++
Sbjct: 1 MPRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQTRFQNACRDGRSEIVYL 58
>UNIPROTKB|E2REW4 [details] [associations]
symbol:CBFB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060216 "definitive hemopoiesis"
evidence=IEA] [GO:0048469 "cell maturation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030099 "myeloid cell
differentiation" evidence=IEA] [GO:0030098 "lymphocyte
differentiation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0001649 "osteoblast differentiation" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 GO:GO:0005634 GO:GO:0045944
GO:GO:0003713 GO:GO:0001649 GO:GO:0048469
GeneTree:ENSGT00390000018132 Gene3D:2.40.250.10 PANTHER:PTHR10276
SUPFAM:SSF50723 GO:GO:0030099 GO:GO:0060216 GO:GO:0030098
EMBL:AAEX03004128 EMBL:AAEX03004129 Ensembl:ENSCAFT00000032470
Uniprot:E2REW4
Length = 187
Score = 212 (79.7 bits), Expect = 2.5e-17, P = 2.5e-17
Identities = 46/95 (48%), Positives = 56/95 (58%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
MPRVVPDQ+SKFE++E FR ERQ RFQN CR+G +EIAF+AT
Sbjct: 1 MPRVVPDQRSKFENEEFFRXXXXXXXXXXXXXXXXXXXERQARFQNACRDGRSEIAFVAT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRE-CDFDKEHGK 132
GTN+ L F P+ S PSRE D ++E GK
Sbjct: 61 GTNLSLQFFPA-SWQGEQRQTPSREYVDLEREAGK 94
>UNIPROTKB|J3KTD8 [details] [associations]
symbol:CBFB "Core-binding factor subunit beta" species:9606
"Homo sapiens" [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003417 Pfam:PF02312 GO:GO:0005634 GO:GO:0003713
Gene3D:2.40.250.10 PANTHER:PTHR10276 SUPFAM:SSF50723 EMBL:AC009084
EMBL:AC074143 HGNC:HGNC:1539 ChiTaRS:CBFB Ensembl:ENST00000565389
Uniprot:J3KTD8
Length = 60
Score = 159 (61.0 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 28/38 (73%), Positives = 33/38 (86%)
Query: 57 RRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIA 94
R+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIA
Sbjct: 2 RKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIA 39
>WB|WBGene00000272 [details] [associations]
symbol:bro-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0045138 "tail tip
morphogenesis" evidence=IMP] InterPro:IPR003417 Pfam:PF02312
GO:GO:0005634 GO:GO:0003713 GO:GO:0045138 Gene3D:2.40.250.10
SUPFAM:SSF50723 EMBL:FO080752 RefSeq:NP_491542.1
ProteinModelPortal:Q95ZL9 SMR:Q95ZL9 STRING:Q95ZL9
EnsemblMetazoa:F56A3.5 GeneID:172158 KEGG:cel:CELE_F56A3.5
UCSC:F56A3.5 CTD:172158 WormBase:F56A3.5 eggNOG:NOG271612
InParanoid:Q95ZL9 OMA:MPLTFCK NextBio:874263 Uniprot:Q95ZL9
Length = 152
Score = 99 (39.9 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 39 MPRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIAT 98
M R DQ+S F++D +LS +E +++ F P ER+ RF+ + F T
Sbjct: 1 MKRTTTDQQSSFQTDYFLTQLSHFTEAKFSLFEHAPLSERRERFRVHVERDEMPLTFCKT 60
Query: 99 GTNIQLVFNPSISANSYHMAPPSRECDFDKEHGKSVSRFNN 139
G NI + S N ++ SR F+ K + N+
Sbjct: 61 GINIPVKLEWS-QTNGNEISFRSRPLVFNGIWVKVIGAMNS 100
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.405 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 142 142 0.00091 102 3 11 22 0.43 31
30 0.47 33
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 558 (59 KB)
Total size of DFA: 137 KB (2086 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 15.10u 0.09s 15.19t Elapsed: 00:00:02
Total cpu time: 15.10u 0.09s 15.19t Elapsed: 00:00:02
Start: Thu Aug 15 11:57:36 2013 End: Thu Aug 15 11:57:38 2013