RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy445
         (142 letters)



>d1e50b_ b.54.1.1 (B:) Core binding factor beta, CBF {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 134

 Score =  150 bits (381), Expect = 1e-48
 Identities = 55/93 (59%), Positives = 68/93 (73%)

Query: 40  PRVVPDQKSKFESDELFRRLSRESEVRYTGFRDRPQEERQVRFQNGCREGHTEIAFIATG 99
           PRVVPDQ+SKFE++E FR+LSRE E++YTGFRDRP EERQ RFQN CR+G +EIAF+ATG
Sbjct: 1   PRVVPDQRSKFENEEFFRKLSRECEIKYTGFRDRPHEERQARFQNACRDGRSEIAFVATG 60

Query: 100 TNIQLVFNPSISANSYHMAPPSRECDFDKEHGK 132
           TN+ L F P+         P     D ++E GK
Sbjct: 61  TNLSLQFFPASWQGEQRQTPSREYVDLEREAGK 93


>d1dj2a_ c.37.1.10 (A:) Adenylosuccinate synthetase, PurA {Mouse-ear
           cress (Arabidopsis thaliana) [TaxId: 3702]}
          Length = 429

 Score = 24.3 bits (52), Expect = 6.7
 Identities = 9/32 (28%), Positives = 11/32 (34%), Gaps = 6/32 (18%)

Query: 80  VRFQNGCREGHTEIAFIATGTNIQLVFN--PS 109
            R Q G   GHT    I      +   +  PS
Sbjct: 35  ARCQGGANAGHT----IYNSEGKKFALHLVPS 62


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.136    0.405 

Gapped
Lambda     K      H
   0.267   0.0683    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 521,650
Number of extensions: 21955
Number of successful extensions: 30
Number of sequences better than 10.0: 1
Number of HSP's gapped: 30
Number of HSP's successfully gapped: 3
Length of query: 142
Length of database: 2,407,596
Length adjustment: 77
Effective length of query: 65
Effective length of database: 1,350,386
Effective search space: 87775090
Effective search space used: 87775090
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (22.4 bits)