Query psy4451
Match_columns 256
No_of_seqs 238 out of 2174
Neff 8.9
Searched_HMMs 29240
Date Fri Aug 16 17:27:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4451.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4451hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gpm_A Engineered protein OR26 99.9 1.8E-21 6.1E-26 153.9 11.2 104 2-117 31-141 (169)
2 4gpm_A Engineered protein OR26 99.8 1E-20 3.5E-25 149.5 11.7 96 2-109 64-166 (169)
3 1n0q_A 3ANK, 3 ankyrin repeats 99.8 2E-20 6.8E-25 132.6 11.1 86 7-104 1-93 (93)
4 3c5r_A BARD-1, BRCA1-associate 99.8 6E-20 2.1E-24 139.1 12.6 106 3-120 5-117 (137)
5 3aaa_C Myotrophin, protein V-1 99.8 1.7E-19 5.8E-24 134.2 11.3 104 4-119 3-113 (123)
6 4b93_B Ankyrin repeat domain-c 99.8 1.1E-19 3.8E-24 153.8 11.0 115 2-117 80-223 (269)
7 1d9s_A Cyclin-dependent kinase 99.8 8.8E-20 3E-24 138.2 9.1 104 1-117 5-116 (136)
8 2l6b_A NR1C; ankyrin, consensu 99.8 5.5E-20 1.9E-24 135.1 7.4 100 3-114 4-110 (115)
9 3twr_A Tankyrase-2; ankyrin re 99.8 6E-19 2E-23 137.6 13.7 104 3-118 37-147 (165)
10 3f6q_A Integrin-linked protein 99.8 4.7E-19 1.6E-23 140.2 13.1 105 2-118 33-144 (179)
11 1awc_B Protein (GA binding pro 99.8 3E-19 1E-23 137.8 11.5 103 4-118 30-139 (153)
12 3v30_A DNA-binding protein rfx 99.8 3.9E-19 1.3E-23 139.5 10.4 103 3-117 31-140 (172)
13 2y1l_E Darpin-8.4; hydrolase-i 99.8 6.8E-19 2.3E-23 138.1 11.7 104 2-117 41-151 (169)
14 3v31_A Ankyrin repeat family A 99.8 4.7E-19 1.6E-23 138.4 10.8 104 2-117 30-140 (167)
15 1oy3_D Transcription factor in 99.8 7.7E-19 2.6E-23 147.8 11.5 108 2-121 152-267 (282)
16 2jab_A H10-2-G3; HER2, darpin, 99.8 6.3E-19 2.1E-23 133.5 9.1 102 5-118 11-119 (136)
17 2rfm_A Putative ankyrin repeat 99.8 9.6E-19 3.3E-23 139.8 10.6 114 3-117 30-172 (192)
18 2jab_A H10-2-G3; HER2, darpin, 99.8 3E-18 1E-22 129.7 11.3 89 2-102 41-136 (136)
19 1n0r_A 4ANK, 4 ankyrin repeats 99.8 2.6E-18 8.7E-23 127.2 10.5 99 7-117 1-106 (126)
20 2dzn_A Probable 26S proteasome 99.8 8.3E-18 2.8E-22 137.4 12.9 115 4-119 68-215 (228)
21 1ihb_A P18-INK4C(INK6), cyclin 99.8 5.4E-18 1.9E-22 131.5 11.0 103 2-117 32-142 (162)
22 1n0r_A 4ANK, 4 ankyrin repeats 99.8 7.6E-18 2.6E-22 124.7 11.1 91 2-104 29-126 (126)
23 1bi7_B P16INK4A, MTS1, multipl 99.7 2.9E-18 9.9E-23 132.8 9.0 102 3-117 7-116 (156)
24 1bi7_B P16INK4A, MTS1, multipl 99.7 9E-19 3.1E-23 135.7 6.0 101 2-115 39-147 (156)
25 1ihb_A P18-INK4C(INK6), cyclin 99.7 3.3E-18 1.1E-22 132.7 9.2 99 6-117 3-108 (162)
26 3ehr_A Osteoclast-stimulating 99.7 4.1E-18 1.4E-22 139.4 9.4 105 4-119 69-180 (222)
27 1d9s_A Cyclin-dependent kinase 99.7 1.1E-18 3.8E-23 132.1 5.6 90 2-104 39-136 (136)
28 3deo_A Signal recognition part 99.7 2E-18 6.9E-23 137.3 7.3 105 5-120 41-151 (183)
29 1k1a_A B-cell lymphoma 3-encod 99.7 1.6E-17 5.6E-22 136.6 13.0 102 5-118 113-222 (241)
30 1yyh_A HN1;, notch 1, ankyrin 99.7 5.1E-18 1.8E-22 141.6 10.0 115 3-117 85-228 (253)
31 2rfa_A Transient receptor pote 99.7 8.2E-18 2.8E-22 138.0 10.9 115 2-117 31-159 (232)
32 3aji_A 26S proteasome non-ATPa 99.7 1.6E-17 5.4E-22 136.1 12.5 115 2-117 67-210 (231)
33 1ikn_D Protein (I-kappa-B-alph 99.7 1.9E-17 6.6E-22 136.4 13.0 115 2-117 39-189 (236)
34 1bd8_A P19INK4D CDK4/6 inhibit 99.7 6.5E-18 2.2E-22 130.3 9.5 103 2-118 30-139 (156)
35 2rfm_A Putative ankyrin repeat 99.7 4.4E-18 1.5E-22 136.0 8.7 99 6-116 6-105 (192)
36 4hbd_A KN motif and ankyrin re 99.7 8.1E-18 2.8E-22 142.6 10.3 104 2-117 105-255 (276)
37 2f8y_A Notch homolog 1, transl 99.7 1.5E-17 5.3E-22 135.4 11.6 113 3-115 53-194 (223)
38 1s70_B 130 kDa myosin-binding 99.7 2.8E-17 9.5E-22 139.7 13.3 60 2-62 67-133 (299)
39 3b7b_A Euchromatic histone-lys 99.7 2.4E-17 8.1E-22 135.5 12.2 115 3-117 72-215 (237)
40 3v30_A DNA-binding protein rfx 99.7 8.5E-18 2.9E-22 131.8 8.8 100 2-113 63-169 (172)
41 1ycs_B 53BP2, P53BP2; ankyrin 99.7 1.7E-17 5.7E-22 137.6 10.8 102 6-119 35-144 (239)
42 2vge_A RELA-associated inhibit 99.7 2.3E-17 8E-22 136.2 11.0 103 4-118 17-127 (229)
43 3ui2_A Signal recognition part 99.7 6.2E-18 2.1E-22 140.8 7.5 105 5-120 42-152 (244)
44 3kea_A K1L; tropism, ANK repea 99.7 7.6E-18 2.6E-22 143.4 8.1 104 2-117 25-134 (285)
45 1dcq_A PYK2-associated protein 99.7 2.2E-17 7.5E-22 140.4 10.6 94 4-109 165-268 (278)
46 3twr_A Tankyrase-2; ankyrin re 99.7 2.5E-17 8.4E-22 128.3 10.0 104 3-117 3-113 (165)
47 2etb_A Transient receptor pote 99.7 1E-17 3.6E-22 139.6 8.3 101 5-117 87-226 (256)
48 3hra_A Ankyrin repeat family p 99.7 3.7E-17 1.3E-21 131.0 11.1 104 3-117 34-145 (201)
49 3hra_A Ankyrin repeat family p 99.7 2.7E-17 9.1E-22 131.9 9.9 106 2-118 66-184 (201)
50 2rfa_A Transient receptor pote 99.7 4E-17 1.4E-21 133.9 10.8 103 3-117 70-202 (232)
51 3utm_A Tankyrase-1; tankyrase, 99.7 8E-17 2.8E-21 139.2 13.1 104 2-117 52-162 (351)
52 2etb_A Transient receptor pote 99.7 1.3E-17 4.4E-22 139.0 7.6 114 3-117 38-177 (256)
53 3aji_A 26S proteasome non-ATPa 99.7 7.7E-17 2.6E-21 131.9 12.1 102 3-116 35-143 (231)
54 2y1l_E Darpin-8.4; hydrolase-i 99.7 7.5E-17 2.6E-21 126.4 11.2 89 2-102 74-169 (169)
55 2xai_A ASB-9, ankyrin repeat a 99.7 9.3E-17 3.2E-21 134.6 12.2 116 2-119 63-206 (261)
56 3v31_A Ankyrin repeat family A 99.7 5.5E-17 1.9E-21 126.6 10.1 99 7-117 2-107 (167)
57 1sw6_A Regulatory protein SWI6 99.7 7.8E-17 2.7E-21 139.8 11.9 115 4-119 127-323 (327)
58 2zgd_A 3 repeat synthetic anky 99.7 5.3E-17 1.8E-21 118.6 9.2 83 4-98 20-109 (110)
59 1yyh_A HN1;, notch 1, ankyrin 99.7 5E-17 1.7E-21 135.6 10.2 114 3-117 52-195 (253)
60 2dzn_A Probable 26S proteasome 99.7 1.2E-16 4.1E-21 130.4 12.1 105 3-117 31-145 (228)
61 1n11_A Ankyrin; clathrin, BAND 99.7 6.1E-17 2.1E-21 145.1 10.9 114 3-117 240-382 (437)
62 1oy3_D Transcription factor in 99.7 7.6E-17 2.6E-21 135.5 10.8 115 2-117 39-197 (282)
63 1awc_B Protein (GA binding pro 99.7 6.2E-17 2.1E-21 124.7 9.3 98 8-117 2-105 (153)
64 1ikn_D Protein (I-kappa-B-alph 99.7 5.6E-17 1.9E-21 133.5 9.6 115 3-117 3-156 (236)
65 2f8y_A Notch homolog 1, transl 99.7 1.6E-16 5.4E-21 129.4 12.2 104 4-108 88-220 (223)
66 3jxi_A Vanilloid receptor-rela 99.7 2E-17 6.7E-22 138.1 6.9 101 5-117 90-230 (260)
67 2vge_A RELA-associated inhibit 99.7 1.1E-17 3.7E-22 138.2 4.8 99 2-112 48-156 (229)
68 3f6q_A Integrin-linked protein 99.7 1.3E-16 4.6E-21 126.0 10.9 101 6-117 3-110 (179)
69 3ljn_A Hypothetical protein; a 99.7 4E-17 1.4E-21 143.0 8.6 107 4-117 134-249 (364)
70 2pnn_A Transient receptor pote 99.7 4.4E-17 1.5E-21 137.2 8.5 102 4-117 97-238 (273)
71 3t8k_A Uncharacterized protein 99.7 7.4E-18 2.5E-22 135.0 3.5 102 6-119 36-161 (186)
72 2xai_A ASB-9, ankyrin repeat a 99.7 2.3E-16 7.7E-21 132.2 12.2 55 4-59 32-93 (261)
73 3jxi_A Vanilloid receptor-rela 99.7 3.5E-17 1.2E-21 136.6 7.2 113 4-117 42-181 (260)
74 3b7b_A Euchromatic histone-lys 99.7 3.5E-16 1.2E-20 128.5 12.7 99 2-112 5-111 (237)
75 1n11_A Ankyrin; clathrin, BAND 99.7 1.1E-16 3.7E-21 143.5 10.5 102 3-116 9-117 (437)
76 2pnn_A Transient receptor pote 99.7 6.9E-17 2.4E-21 136.0 8.4 114 3-117 49-189 (273)
77 1s70_B 130 kDa myosin-binding 99.7 1.1E-16 3.8E-21 136.0 9.6 101 5-117 37-144 (299)
78 3d9h_A CDNA FLJ77766, highly s 99.7 3.5E-16 1.2E-20 133.0 12.5 96 2-109 53-155 (285)
79 3lvq_E ARF-GAP with SH3 domain 99.7 1.2E-16 4.2E-21 146.3 10.0 91 5-107 168-268 (497)
80 3d9h_A CDNA FLJ77766, highly s 99.7 4.6E-16 1.6E-20 132.2 12.7 115 2-118 119-261 (285)
81 4g8k_A 2-5A-dependent ribonucl 99.7 6.3E-16 2.2E-20 133.9 13.2 43 74-116 163-206 (337)
82 1wdy_A 2-5A-dependent ribonucl 99.7 4.1E-16 1.4E-20 130.7 11.7 103 4-117 144-258 (285)
83 4hbd_A KN motif and ankyrin re 99.7 2.6E-16 8.9E-21 133.3 10.4 88 3-102 178-273 (276)
84 3eu9_A Huntingtin-interacting 99.7 8.6E-16 2.9E-20 125.7 12.8 101 5-117 39-147 (240)
85 1k1a_A B-cell lymphoma 3-encod 99.7 6.9E-16 2.4E-20 126.8 11.9 90 2-103 3-103 (241)
86 1bd8_A P19INK4D CDK4/6 inhibit 99.7 5.3E-16 1.8E-20 119.5 10.5 100 7-117 1-106 (156)
87 4g8k_A 2-5A-dependent ribonucl 99.7 4.5E-16 1.5E-20 134.9 10.8 89 3-107 234-329 (337)
88 3ehr_A Osteoclast-stimulating 99.7 9.2E-17 3.1E-21 131.3 6.0 98 2-110 100-204 (222)
89 4b93_B Ankyrin repeat domain-c 99.6 4.2E-17 1.4E-21 137.9 4.0 93 2-106 146-246 (269)
90 3utm_A Tankyrase-1; tankyrase, 99.6 6.9E-16 2.4E-20 133.3 11.6 102 4-117 207-318 (351)
91 1ycs_B 53BP2, P53BP2; ankyrin 99.6 2.2E-16 7.6E-21 130.7 7.6 101 5-117 2-108 (239)
92 3ljn_A Hypothetical protein; a 99.6 3E-16 1E-20 137.4 8.7 93 2-106 167-271 (364)
93 1wdy_A 2-5A-dependent ribonucl 99.6 1.4E-15 4.8E-20 127.5 12.4 92 5-108 36-134 (285)
94 3kea_A K1L; tropism, ANK repea 99.6 3.6E-16 1.2E-20 133.0 8.2 100 2-114 89-196 (285)
95 3c5r_A BARD-1, BRCA1-associate 99.6 9.2E-17 3.1E-21 121.4 3.9 91 2-104 37-134 (137)
96 2fo1_E LIN-12 protein; beta-ba 99.6 4.4E-16 1.5E-20 137.3 8.9 116 2-117 193-351 (373)
97 2b0o_E UPLC1; arfgap, structur 99.6 2.3E-16 7.8E-21 135.6 6.7 89 4-104 186-284 (301)
98 3aaa_C Myotrophin, protein V-1 99.6 3.9E-16 1.3E-20 115.8 6.5 81 2-94 34-121 (123)
99 2fo1_E LIN-12 protein; beta-ba 99.6 9.6E-16 3.3E-20 135.2 9.2 91 4-105 275-372 (373)
100 3deo_A Signal recognition part 99.6 1.6E-15 5.5E-20 120.4 9.3 88 2-101 70-181 (183)
101 3ui2_A Signal recognition part 99.6 1.9E-15 6.6E-20 125.7 10.1 92 2-105 71-186 (244)
102 3jue_A Arfgap with coiled-coil 99.6 2.6E-15 8.9E-20 132.5 10.2 99 7-117 198-306 (368)
103 3t8k_A Uncharacterized protein 99.6 1.5E-15 5.1E-20 121.5 7.7 92 1-104 68-179 (186)
104 3eu9_A Huntingtin-interacting 99.6 5.1E-15 1.7E-19 121.1 10.6 105 1-117 2-114 (240)
105 3jue_A Arfgap with coiled-coil 99.6 3.1E-15 1.1E-19 132.0 8.7 90 3-104 228-326 (368)
106 1dcq_A PYK2-associated protein 99.6 1.4E-14 4.9E-19 122.9 10.4 98 9-118 131-244 (278)
107 2b0o_E UPLC1; arfgap, structur 99.5 1.7E-14 5.9E-19 123.8 9.8 98 8-117 151-264 (301)
108 3lvq_E ARF-GAP with SH3 domain 99.5 1.5E-14 5.2E-19 132.4 9.6 97 9-117 133-245 (497)
109 2aja_A Ankyrin repeat family p 99.5 2.7E-15 9.2E-20 132.8 0.7 92 5-106 89-190 (376)
110 1n0q_A 3ANK, 3 ankyrin repeats 99.5 1.1E-13 3.9E-18 97.3 7.4 71 36-117 2-73 (93)
111 2aja_A Ankyrin repeat family p 99.5 2.4E-14 8.3E-19 126.6 3.8 89 4-104 124-224 (376)
112 2zgd_A 3 repeat synthetic anky 99.3 4.1E-12 1.4E-16 92.3 7.4 72 36-118 24-96 (110)
113 1sw6_A Regulatory protein SWI6 99.3 9.2E-13 3.1E-17 114.0 4.6 78 2-90 195-327 (327)
114 2l6b_A NR1C; ankyrin, consensu 99.2 1.6E-11 5.5E-16 89.4 6.4 72 35-117 8-80 (115)
115 3rvy_A ION transport protein; 96.7 0.00054 1.9E-08 57.7 1.8 78 142-251 87-164 (285)
116 4dxw_A Navrh, ION transport pr 96.5 0.0012 4.1E-08 53.6 2.8 81 141-251 69-149 (229)
117 2r9r_B Paddle chimera voltage 93.7 0.091 3.1E-06 47.8 5.9 25 141-165 266-290 (514)
118 3beh_A MLL3241 protein; transm 82.3 0.69 2.4E-05 39.6 2.7 45 209-253 103-147 (355)
119 2r9r_B Paddle chimera voltage 69.3 25 0.00086 31.7 9.4 27 145-171 237-263 (514)
120 1orq_C Potassium channel; volt 58.1 36 0.0012 26.4 7.5 24 146-169 38-61 (223)
121 3g9r_A Fusion complex of HIV-1 56.1 15 0.00051 20.5 3.2 21 145-165 5-25 (42)
122 1ors_C Potassium channel; volt 43.9 84 0.0029 22.3 7.0 27 145-171 35-61 (132)
123 3zrh_A Ubiquitin thioesterase 38.5 71 0.0024 27.9 6.4 66 36-101 20-91 (454)
124 1gp8_A Protein (scaffolding pr 30.4 36 0.0012 18.9 2.1 17 83-99 17-33 (40)
125 3rvy_A ION transport protein; 27.5 82 0.0028 25.4 5.0 97 144-247 58-157 (285)
126 3zrh_A Ubiquitin thioesterase 23.8 1.3E+02 0.0044 26.3 5.5 43 15-57 29-91 (454)
No 1
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.86 E-value=1.8e-21 Score=153.87 Aligned_cols=104 Identities=24% Similarity=0.227 Sum_probs=80.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
..+|.+|+||||.|+..++.++++.|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 31 n~~d~~g~t~l~~a~~~~~~~~~~~ll~~-gad~~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-----------gadvn~ 98 (169)
T 4gpm_A 31 NASDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-----------GADVNA 98 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHhc-ccchhhhccCCCCHHHHHHHcCCHHHHHHHHHC-----------cCCCCC
Confidence 46778888888888888888888888887 5554 678887 8888888888888887 556666
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
++..|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 99 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 141 (169)
T 4gpm_A 99 KDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLD 141 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 7777778888888888888888888888777777776666654
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.84 E-value=1e-20 Score=149.47 Aligned_cols=96 Identities=27% Similarity=0.275 Sum_probs=78.8
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||+|+.+|+.+++++|+++ |+++ |+|||| |+..|+.+++++|+++ |++.+.
T Consensus 64 ~~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-----------gad~~~ 131 (169)
T 4gpm_A 64 NAKDSDGRTPLHHAAENGHKEVVKLLISK-GADVNAKDSDGRTPLHHAAENGHKEVVKLLISK-----------GADVNT 131 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred hhhccCCCCHHHHHHHcCCHHHHHHHHHC-cCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCccc
Confidence 45788999999999999999999999998 6665 789998 9999999999999998 677788
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPH 109 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~ 109 (256)
++..|.||||+|++.|+.+++++|+++||+++..+
T Consensus 132 ~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~~~ 166 (169)
T 4gpm_A 132 SDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEHHH 166 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTC--------
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCCCC
Confidence 89999999999999999999999999999988654
No 3
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.84 E-value=2e-20 Score=132.60 Aligned_cols=86 Identities=35% Similarity=0.450 Sum_probs=78.8
Q ss_pred CCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCC
Q psy4451 7 QGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKC 79 (256)
Q Consensus 7 ~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g 79 (256)
+|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-----------ga~~~~~d~~g 68 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-----------GADVNAKDKNG 68 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCTTS
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCccCCCC
Confidence 589999999999999999999998 6654 789999 9999999999999999 67778889999
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 80 ITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 80 ~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
.||||+|+..|+.+++++|+++|++
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 69 RTPLHLAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 9999999999999999999999985
No 4
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=6e-20 Score=139.11 Aligned_cols=106 Identities=25% Similarity=0.270 Sum_probs=96.4
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|.+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.+
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-----------g~~~~~~ 72 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN-GSDPNVKDHAGWTPLHEACNHGHLKVVELLLQH-----------KALVNTT 72 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCcccCc
Confidence 4689999999999999999999999998 6654 789999 9999999999999999 6677788
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVCQ 120 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~~ 120 (256)
+..|.||||+|+..|+.+++++|+++|++++..+..+.++.+.+.
T Consensus 73 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~ 117 (137)
T 3c5r_A 73 GYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTD 117 (137)
T ss_dssp CGGGCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHh
Confidence 889999999999999999999999999999999888888877443
No 5
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.81 E-value=1.7e-19 Score=134.20 Aligned_cols=104 Identities=24% Similarity=0.223 Sum_probs=91.9
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.+..|.||||.|+.+|+.++++.|+++ +.++ |.|||| |+..|+.+++++|+++ |.+.+.++
T Consensus 3 ~~~~~~~~l~~A~~~~~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~d 70 (123)
T 3aaa_C 3 LGSMCDKEFMWALKNGDLDEVKDYVAK-GEDVNRTLEGGRKPLHYAADCGQLEILEFLLLK-----------GADINAPD 70 (123)
T ss_dssp ----CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTT-----------TCCTTCCC
T ss_pred cccccchHHHHHHHcCCHHHHHHHHHc-CCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHc-----------CCCCCcCC
Confidence 356799999999999999999999998 5554 789999 9999999999999998 67778889
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~ 119 (256)
..|.||||+|+..|+.+++++|+++|++++..+..+.++.+.+
T Consensus 71 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 113 (123)
T 3aaa_C 71 KHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEAT 113 (123)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence 9999999999999999999999999999999888888887744
No 6
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.81 E-value=1.1e-19 Score=153.82 Aligned_cols=115 Identities=21% Similarity=0.169 Sum_probs=91.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc---------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES--------- 65 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~--------- 65 (256)
...|.+|+||||+|+.+|+.+++++|++. ++++ |.||+| |+..++.++++.|+++|++++...
T Consensus 80 n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~ 158 (269)
T 4b93_B 80 NVTSQDGSSPLHVAALHGRADLIPLLLKH-GANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIY 158 (269)
T ss_dssp TCCCTTSCCHHHHHHHTTCTTHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCcHHHHHHHHhc-CCCcCccCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHH
Confidence 46788999999999999999999999988 5554 667777 777888888888887766543210
Q ss_pred -------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 -------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 -------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|++.+..+..|.||||+|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 159 A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~ 223 (269)
T 4b93_B 159 ACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAVD 223 (269)
T ss_dssp HHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCSGG
T ss_pred HHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 0136777788888888888888888888888888888888888877777776
No 7
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.80 E-value=8.8e-20 Score=138.23 Aligned_cols=104 Identities=19% Similarity=0.147 Sum_probs=94.1
Q ss_pred CcccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 1 MFYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 1 ~~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
+...|..|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+. |+.+++++|+++ |.+.+
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-----------g~~~~ 71 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEA-GADPNALNRFGRRPIQVMMM-GSAQVAELLLLH-----------GAEPN 71 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCTTTTTSTT-SCHHHHHHHHHH-----------TCCSS
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHc-CCHHHHHHHHHC-----------CCCCC
Confidence 356789999999999999999999999998 6654 789999 999 999999999998 66777
Q ss_pred CCCCC-CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 74 NDFPK-CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 74 ~~~~~-g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.++.. |.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 72 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (136)
T 1d9s_A 72 CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVD 116 (136)
T ss_dssp CCBTTTTBCHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHH
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 78888 999999999999999999999999999988887777765
No 8
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.80 E-value=5.5e-20 Score=135.14 Aligned_cols=100 Identities=28% Similarity=0.258 Sum_probs=89.7
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|++|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.+
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~-----------g~~~~~~ 71 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK-GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK-----------GADVNAR 71 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT-TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTT-----------TCCTTCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-----------CCCCccc
Confidence 5799999999999999999999999998 5554 789999 9999999999999998 6677788
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQ 114 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~ 114 (256)
+..|.||||+|+..|+.+++++|+++|++++.....+..
T Consensus 72 d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~n~~~~~~~~ 110 (115)
T 2l6b_A 72 SKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSH 110 (115)
T ss_dssp CTTCCCTTHHHHTTTCHHHHHHHHTTSSSHHHHSCCCC-
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCccccc
Confidence 899999999999999999999999999999866554443
No 9
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.80 E-value=6e-19 Score=137.56 Aligned_cols=104 Identities=25% Similarity=0.204 Sum_probs=86.5
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|..|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.+
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~ 104 (165)
T 3twr_A 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQH-GADVHAKDKGGLVPLHNACSYGHYEVAELLVKH-----------GAVVNVA 104 (165)
T ss_dssp CTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCC
T ss_pred ccccCCCCHHHHHHHcChHHHHHHHHhc-CCCCCccCCCCCCHHHHHHHcCcHHHHHHHHhC-----------CCCCCCc
Confidence 3466778888888888888888888887 5544 678888 8888888888888888 6667778
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
+..|.||||+|+..|+.+++++|+++|++++..+..+.++.+.
T Consensus 105 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 147 (165)
T 3twr_A 105 DLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDL 147 (165)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGG
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHh
Confidence 8889999999999999999999999999999888888887774
No 10
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.80 E-value=4.7e-19 Score=140.23 Aligned_cols=105 Identities=18% Similarity=0.117 Sum_probs=93.4
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 33 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 100 (179)
T 3f6q_A 33 NQGDDHGFSPLHWACREGRSAVVEMLIMR-GARINVMNRGDDTPLHLAASHGHRDIVQKLLQY-----------KADINA 100 (179)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred cccCCCCCCHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCc
Confidence 45688899999999999999999999998 6655 779999 9999999999999998 667778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
.+..|.||||.|+..|+.+++++|+++|++++..+..+.++.+.
T Consensus 101 ~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 144 (179)
T 3f6q_A 101 VNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDK 144 (179)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGG
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHH
Confidence 88899999999999999999999999999999888888887763
No 11
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.80 E-value=3e-19 Score=137.77 Aligned_cols=103 Identities=20% Similarity=0.189 Sum_probs=92.7
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++
T Consensus 30 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~ 97 (153)
T 1awc_B 30 TDWLGTSPLHLAAQYGHFSTTEVLLRA-GVSRDARTKVDRTPLHMAASEGHANIVEVLLKH-----------GADVNAKD 97 (153)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTT-----------TCCTTCCC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcChHHHHHHHHHc-----------CCCCCCCC
Confidence 478899999999999999999999998 5554 789999 9999999999999998 66777888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
..|.||||.|+..|+.+++++|+++|++++..+..+.++.+.
T Consensus 98 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 139 (153)
T 1awc_B 98 MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDI 139 (153)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHH
Confidence 999999999999999999999999999999888877777653
No 12
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.79 E-value=3.9e-19 Score=139.54 Aligned_cols=103 Identities=21% Similarity=0.146 Sum_probs=91.2
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+..
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~ 98 (172)
T 3v30_A 31 KPDERGFTPLIWASAFGEIETVRFLLEW-GADPHILAKERESALSLASTGGYTDIVGLLLER-----------DVDINIY 98 (172)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-----------TCCTTCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCchhhcccCCCHHHHHHHCCCHHHHHHHHHc-----------CCCCCCC
Confidence 4688899999999999999999999988 5554 779999 9999999999999998 6677788
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
+..|.||||.|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 99 ~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 140 (172)
T 3v30_A 99 DWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMD 140 (172)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHH
Confidence 889999999999999999999999999999988877777765
No 13
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.79 E-value=6.8e-19 Score=138.11 Aligned_cols=104 Identities=25% Similarity=0.238 Sum_probs=85.2
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-----------g~~~~~ 108 (169)
T 2y1l_E 41 NAEDASGWTPLHLAAFNGHLEIVEVLLKN-GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKN-----------GADVNA 108 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 34677888888888888888888888887 5544 678888 8888888888888887 666777
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.+..|.||||.|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 109 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 151 (169)
T 2y1l_E 109 NDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFD 151 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 7888899999999999999999999999998887777777665
No 14
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.79 E-value=4.7e-19 Score=138.43 Aligned_cols=104 Identities=23% Similarity=0.210 Sum_probs=85.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 97 (167)
T 3v31_A 30 NHTDEEGFTPLMWAAAHGQIAVVEFLLQN-GADPQLLGKGRESALSLACSKGYTDIVKMLLDC-----------GVDVNE 97 (167)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHH-----------TCCTTC
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHC-----------CCCCCc
Confidence 35677888888888888888888888887 5544 668888 8888888888888887 666777
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.+..|.||||.|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 98 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 140 (167)
T 3v31_A 98 YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMD 140 (167)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 7888899999999999999999999999998888777777665
No 15
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.78 E-value=7.7e-19 Score=147.78 Aligned_cols=108 Identities=21% Similarity=0.193 Sum_probs=88.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|..|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+
T Consensus 152 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-----------gad~~ 219 (282)
T 1oy3_D 152 EAENYDGHTPLHVAVIHKDAEMVRLLRDA-GADLNKPEPTCGRTPLHLAVEAQAASVLELLLKA-----------GADPT 219 (282)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTT
T ss_pred CCcCCCCcCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc-----------CCCCc
Confidence 35688999999999999999999999998 5543 789999 9999999999999999 77788
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccccccc
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVCQN 121 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~~~ 121 (256)
.++..|.||||+|+..|+.+++++|+++|++++..+..+.++.+....
T Consensus 220 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 220 ARMYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp CCCTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------------
T ss_pred ccccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 889999999999999999999999999999999998888888764433
No 16
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.78 E-value=6.3e-19 Score=133.49 Aligned_cols=102 Identities=23% Similarity=0.158 Sum_probs=91.1
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFP 77 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 77 (256)
+..|.||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+..+.
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~d~ 78 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMAN-GADVNAKDEYGLTPLYLATAHGHLEIVEVLLKN-----------GADVNAVDA 78 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCT
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCcCCC
Confidence 45678999999999999999999998 6554 789999 9999999999999999 667778888
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 78 KCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 78 ~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
.|.||||.|+..|+.+++++|+++|++++..+..+.++...
T Consensus 79 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~ 119 (136)
T 2jab_A 79 IGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDI 119 (136)
T ss_dssp TCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCcCcCCCCCCHHHH
Confidence 99999999999999999999999999999888777777653
No 17
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.78 E-value=9.6e-19 Score=139.84 Aligned_cols=114 Identities=23% Similarity=0.174 Sum_probs=66.0
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc----------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES---------- 65 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~---------- 65 (256)
..|.+|+||||.|+..|+.+++++|+++ +.++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 30 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 108 (192)
T 2rfm_A 30 YRDSYNRTPLMVACMLGMENAIDKLVEN-FDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWS 108 (192)
T ss_dssp CCCTTCCCHHHHHHHHTCGGGHHHHHHH-HCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHh-ccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 4566667777777777777777776665 3332 556666 666666667766666643321100
Q ss_pred ------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 ------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 ------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+.++..|.||||+|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 109 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 172 (192)
T 2rfm_A 109 IIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEA 172 (192)
T ss_dssp HHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHH
T ss_pred HHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHH
Confidence 0014445555556666666666666666666666666666655555555443
No 18
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.77 E-value=3e-18 Score=129.67 Aligned_cols=89 Identities=18% Similarity=0.128 Sum_probs=81.4
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 41 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 108 (136)
T 2jab_A 41 NAKDEYGLTPLYLATAHGHLEIVEVLLKN-GADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKH-----------GADVNA 108 (136)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTC
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCcC
Confidence 45788999999999999999999999998 6654 789999 9999999999999999 667778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERG 102 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~g 102 (256)
++..|.||||+|+..|+.+++++|++.|
T Consensus 109 ~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 109 QDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 8899999999999999999999999987
No 19
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.76 E-value=2.6e-18 Score=127.24 Aligned_cols=99 Identities=30% Similarity=0.360 Sum_probs=88.3
Q ss_pred CCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCC
Q psy4451 7 QGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKC 79 (256)
Q Consensus 7 ~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g 79 (256)
+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++..|
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-----------g~~~~~~~~~g 68 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-----------GADVNAKDKNG 68 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCTTS
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHc-----------CCCCcccCCCC
Confidence 589999999999999999999998 5544 789999 9999999999999998 66677788889
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 80 ITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 80 ~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 69 ~t~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~ 106 (126)
T 1n0r_A 69 RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLH 106 (126)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcChHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 99999999999999999999999999988777777765
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.75 E-value=8.3e-18 Score=137.36 Aligned_cols=115 Identities=16% Similarity=0.106 Sum_probs=81.7
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCC--CCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc--------
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPS--IKV------RDGALH-AIQCDEINILKLILDWQKCHKPESE-------- 66 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~--~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~-------- 66 (256)
.|..|+||||.|+..|+.+++++|+++ + .++ |.|||| |+..|+.+++++|+++|++.+....
T Consensus 68 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 146 (228)
T 2dzn_A 68 PDDSGWTPFHIACSVGNLEVVKSLYDR-PLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHR 146 (228)
T ss_dssp CCTTSCCHHHHHHHHCCHHHHHHHHSS-SSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHH
Confidence 566777777777777777777777776 3 332 667777 7777777777777777655432100
Q ss_pred --------------ccC-CCCCCCCCCCCcHHHHHHHcCcHHHHHHHH-HCCCCCCCCCCCCCcccccc
Q psy4451 67 --------------FKG-HCNSNDFPKCITPLMLAAQLGRLEIVALLL-ERGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 67 --------------~~~-~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll-~~ga~i~~~~~~~~~~~~~~ 119 (256)
..| .+.+.++..|.||||.|+..|+.+++++|+ +.|++++..+..+.++.+.+
T Consensus 147 A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A 215 (228)
T 2dzn_A 147 AASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVA 215 (228)
T ss_dssp HHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGC
T ss_pred HHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHH
Confidence 124 666777888888888888888888888888 77888888877777777644
No 21
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.75 E-value=5.4e-18 Score=131.45 Aligned_cols=103 Identities=18% Similarity=0.160 Sum_probs=86.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||.|+. |+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 32 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 98 (162)
T 1ihb_A 32 NAQNGFGRTALQVMKL-GNPEIARRLLLR-GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEF-----------QADVNI 98 (162)
T ss_dssp TCCCTTSCCHHHHCCS-SCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTC
T ss_pred cccCccCccHHHHHHc-CcHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 3567889999999998 999999999988 5554 778998 9999999999999998 666777
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCC-CCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHC-IPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~-i~~~~~~~~~~~~ 117 (256)
++..|.||||.|+..|+.+++++|+++|++ ++..+..+.++..
T Consensus 99 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~ 142 (162)
T 1ihb_A 99 EDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACD 142 (162)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHH
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHH
Confidence 788889999999999999999999999987 5777766777655
No 22
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.75 E-value=7.6e-18 Score=124.66 Aligned_cols=91 Identities=33% Similarity=0.372 Sum_probs=83.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|.||||.|+..++.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 29 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~-----------g~~~~~ 96 (126)
T 1n0r_A 29 NAKDKNGRTPLHLAARNGHLEVVKLLLEA-GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA-----------GADVNA 96 (126)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred CCcCCCCCcHHHHHHHcCcHHHHHHHHHc-CCCCcccCCCCCcHHHHHHHcChHHHHHHHHHc-----------CCCCcc
Confidence 34688999999999999999999999998 5554 789999 9999999999999999 667778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
++..|.||++.|+..|+.+++++|+++|++
T Consensus 97 ~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 97 KDKNGRTPLHLAARNGHLEVVKLLLEAGAY 126 (126)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence 889999999999999999999999999986
No 23
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.75 E-value=2.9e-18 Score=132.83 Aligned_cols=102 Identities=20% Similarity=0.147 Sum_probs=87.1
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..++.|.||||.|+..|+.+++++|+++ ++++ |.|||| | ..|+.+++++|+++ |.+.+.+
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A-~~~~~~~v~~Ll~~-----------g~~~~~~ 73 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA-GANPNAPNSYGRRPIQVM-MMGSARVAELLLLH-----------GAEPNCA 73 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT-TCCTTCCCSSSCCTTTSS-CTTCHHHHHHHHTT-----------TCCCCCC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHH-HcCCHHHHHHHHHc-----------CCCCCCc
Confidence 3578899999999999999999999998 6654 789999 6 59999999999998 6677778
Q ss_pred CCCCCc-HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 76 FPKCIT-PLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 76 ~~~g~T-pL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
+..|.| |||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 74 d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 116 (156)
T 1bi7_B 74 DPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 116 (156)
T ss_dssp CTTTCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTCCCHHH
T ss_pred CCCCCcHHHHHHHHCCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 888888 999999999999999999999999888777777655
No 24
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.75 E-value=9e-19 Score=135.71 Aligned_cols=101 Identities=14% Similarity=0.043 Sum_probs=80.8
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chh-HHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDG-ALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t-~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|..|+||||+|+ +|+.+++++|+++ |+++ |.| ||| |+..|+.+++++|+++ |.+.+
T Consensus 39 ~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~-g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~-----------ga~~~ 105 (156)
T 1bi7_B 39 NAPNSYGRRPIQVMM-MGSARVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-----------GARLD 105 (156)
T ss_dssp TCCCSSSCCTTTSSC-TTCHHHHHHHHTT-TCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHH-----------TCCSS
T ss_pred CCCCCCCCCHHHHHH-cCCHHHHHHHHHc-CCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHc-----------CCCCc
Confidence 457889999999996 9999999999998 6655 677 999 9999999999999999 67778
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcc
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQC 115 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~ 115 (256)
.++..|.||||+|+..|+.+++++|+++|++++..+..+.+.
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 147 (156)
T 1bi7_B 106 VRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDA 147 (156)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHSSCC-------------
T ss_pred ccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcc
Confidence 888999999999999999999999999999999776655444
No 25
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.75 E-value=3.3e-18 Score=132.70 Aligned_cols=99 Identities=18% Similarity=0.079 Sum_probs=81.3
Q ss_pred CCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCC
Q psy4451 6 FQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPK 78 (256)
Q Consensus 6 ~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 78 (256)
+...||||.|+.+|+.++++.|+++ ++++ |.|||| |+. |+.+++++|+++ |.+.+..+..
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-----------g~~~~~~~~~ 69 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN-NVNVNAQNGFGRTALQVMKL-GNPEIARRLLLR-----------GANPDLKDRT 69 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS-CCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHT-----------TCCTTCCCTT
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC-CCCccccCccCccHHHHHHc-CcHHHHHHHHHc-----------CCCCCCCCCC
Confidence 4467899999999999999999987 5544 778998 777 999999999988 6666777888
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
|.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 70 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 108 (162)
T 1ihb_A 70 GFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLH 108 (162)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 899999999999999999999999998888777777654
No 26
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.74 E-value=4.1e-18 Score=139.36 Aligned_cols=105 Identities=18% Similarity=0.124 Sum_probs=93.8
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.|..|+||||.|+.+|+.++++.|++. ++++ |.|||| |+..|+.+++++|+++ .|.+.+.++
T Consensus 69 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----------~g~~~~~~d 137 (222)
T 3ehr_A 69 QAESIDNPLHEAAKRGNLSWLRECLDN-RVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQ----------PNIELNQQN 137 (222)
T ss_dssp HEEEESCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTS----------TTCCCCCCC
T ss_pred cccccccccccccccCcHHHHHHHHhC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHcC----------CCCCccccC
Confidence 356789999999999999999999998 5554 789999 9999999999999987 356677888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~ 119 (256)
..|.||||+|+..|+.+++++|+++|++++..+..+.++.+.+
T Consensus 138 ~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A 180 (222)
T 3ehr_A 138 KLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMA 180 (222)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHC
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCHHHHh
Confidence 9999999999999999999999999999999888888877633
No 27
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.74 E-value=1.1e-18 Score=132.11 Aligned_cols=90 Identities=17% Similarity=0.073 Sum_probs=82.7
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|.+|+||||+|+. |+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+
T Consensus 39 ~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------ga~~~ 105 (136)
T 1d9s_A 39 NALNRFGRRPIQVMMM-GSAQVAELLLLH-GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRA-----------GARLD 105 (136)
T ss_dssp TCCCTTCCTTTTTSTT-SCHHHHHHHHHH-TCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-----------CCCCC
T ss_pred CCcCCCCCCHHHHHHc-CCHHHHHHHHHC-CCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCC
Confidence 4578999999999999 999999999998 5554 689999 9999999999999999 67778
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
.++..|.||||+|+..|+.+++++|+++|+|
T Consensus 106 ~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad 136 (136)
T 1d9s_A 106 VCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136 (136)
T ss_dssp CCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence 8889999999999999999999999999986
No 28
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.74 E-value=2e-18 Score=137.31 Aligned_cols=105 Identities=20% Similarity=0.129 Sum_probs=91.5
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC-CC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF-PK 78 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-~~ 78 (256)
|.+|+||||.|+.+|+.++++.|++..+++. |.|||| |+..|+.+++++|+++ |.+.+..+ ..
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-----------ga~~~~~~~~~ 109 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA-----------GADLDHRDMRG 109 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTTTSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCSSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCcCCCCC
Confidence 5678999999999999999999998322222 889999 9999999999999999 66666666 78
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVCQ 120 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~~ 120 (256)
|.||||+|+..|+.+++++|+++|++++..+..+.++...+.
T Consensus 110 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~ 151 (183)
T 3deo_A 110 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 151 (183)
T ss_dssp SCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHH
T ss_pred CCCHHHHHHhcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHH
Confidence 999999999999999999999999999999888888876443
No 29
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.74 E-value=1.6e-17 Score=136.59 Aligned_cols=102 Identities=20% Similarity=0.253 Sum_probs=64.6
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++
T Consensus 113 ~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~ 180 (241)
T 1k1a_A 113 NYDGLTALHVAVNTECQETVQLLLER-GADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQH-----------GANVNAQM 180 (241)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCBC
T ss_pred CcCCCcHHHHHHHcCCHHHHHHHHHc-CCCcccccccCCCcHHHHHHHcCCHHHHHHHHHc-----------CCCCCCcC
Confidence 34444555555555555555555444 2221 344554 5555555555555544 66677777
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
..|.||||.|+..|+.+++++|+++|++++..+..+.++.+.
T Consensus 181 ~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~ 222 (241)
T 1k1a_A 181 YSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMV 222 (241)
T ss_dssp TTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTT
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCcCCCCCCHHHH
Confidence 888888888888888888888888888888777777777653
No 30
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.74 E-value=5.1e-18 Score=141.58 Aligned_cols=115 Identities=16% Similarity=0.073 Sum_probs=72.2
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc----------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES---------- 65 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~---------- 65 (256)
..|.+|+||||+|+..|+.+++++|++++..++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 85 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 164 (253)
T 1yyh_A 85 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 164 (253)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHH
Confidence 456777777777777777777777777632122 567776 777777777777777644332110
Q ss_pred ------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 ------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 ------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+.++..|.||||+|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 165 ~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 228 (253)
T 1yyh_A 165 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD 228 (253)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccCCCCHHH
Confidence 0025555566666666666666666666666666666666666655555554
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.74 E-value=8.2e-18 Score=138.01 Aligned_cols=115 Identities=22% Similarity=0.190 Sum_probs=92.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCC-----------CchhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc--c
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIK-----------VRDGALH-AIQCDEINILKLILDWQKCHKPESE--F 67 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~-----------~g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~--~ 67 (256)
...|.+|+||||+|+..|+.+++++|+++ +.+ .|.|||| |+..|+.+++++|+++|++.+.... .
T Consensus 31 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 109 (232)
T 2rfa_A 31 HQRGAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSV 109 (232)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcc
Confidence 45688899999999999999999999987 443 2779998 9999999999999999776543211 1
Q ss_pred cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 68 KGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 68 ~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.....+..+..|.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~ 159 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLH 159 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 12233445668999999999999999999999999999988888887765
No 32
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.74 E-value=1.6e-17 Score=136.09 Aligned_cols=115 Identities=23% Similarity=0.135 Sum_probs=81.6
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc---------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES--------- 65 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~--------- 65 (256)
...|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 67 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~ 145 (231)
T 3aji_A 67 NDKDDAGWSPLHIAASAGXDEIVKALLVK-GAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHR 145 (231)
T ss_dssp CCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCcCCCCCCHHHHHHHcCHHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHH
Confidence 34677888888888888888888888887 5544 678888 888888888888888865543210
Q ss_pred -------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 -------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 -------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+.++..|.||||.|+..|+.+++++|+++|++++.++..+.++.+
T Consensus 146 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~ 210 (231)
T 3aji_A 146 AAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQ 210 (231)
T ss_dssp HHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred HHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence 0125556666667777777777777777777777777777666666665554
No 33
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.74 E-value=1.9e-17 Score=136.37 Aligned_cols=115 Identities=19% Similarity=0.130 Sum_probs=78.2
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCC----------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPE---------- 64 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~---------- 64 (256)
...|..|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++++++....
T Consensus 39 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g 117 (236)
T 1ikn_D 39 NFQNNLQQTPLHLAVITNQPEIAEALLGA-GCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNG 117 (236)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHCCCSC-CCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTC
T ss_pred hccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCC
Confidence 34667788888888888888888888877 5544 667787 77888888888887776532100
Q ss_pred ------------------ccccCCCCCCCCC-CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 65 ------------------SEFKGHCNSNDFP-KCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 65 ------------------~~~~~~~~~~~~~-~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
....|.+.+..+. .|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 118 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~ 189 (236)
T 1ikn_D 118 HTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQ 189 (236)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGG
T ss_pred CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHH
Confidence 0012555666665 6777777777777777777777777777766666666554
No 34
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.74 E-value=6.5e-18 Score=130.33 Aligned_cols=103 Identities=18% Similarity=0.165 Sum_probs=86.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||. +.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 30 ~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 96 (156)
T 1bd8_A 30 DALNRFGKTALQV-MMFGSTAIALELLKQ-GASPNVQDTSGTSPVHDAARTGFLDTLKVLVEH-----------GADVNV 96 (156)
T ss_dssp TCCCTTSCCHHHH-SCTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCSCC
T ss_pred cccCCCCCcHHHH-HHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHc-----------CCCCCC
Confidence 3467889999999 888999999999988 5554 778998 9999999999999988 666777
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
++..|.||||.|+..|+.+++++|++. ++++..+..+.++...
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~ 139 (156)
T 1bd8_A 97 PDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLEL 139 (156)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHH
T ss_pred cCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHH
Confidence 788889999999999999999999988 8888877777776653
No 35
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.74 E-value=4.4e-18 Score=135.97 Aligned_cols=99 Identities=15% Similarity=0.039 Sum_probs=64.9
Q ss_pred CCCChHHHHHHHhCCHHHHHHHhcCCCCCCchhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHH
Q psy4451 6 FQGVSALQTAIIKNDVMMVKYLLSLPSIKVRDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLM 84 (256)
Q Consensus 6 ~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~ 84 (256)
+.|++.-+++....-.+..+.+.+. .-..|.|||| |+..|+.++++.|+++ +.+.+..+..|.||||
T Consensus 6 ~~~~~~~~~~~~~~i~~~~~~~~n~-~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----------~~~~~~~~~~g~t~L~ 73 (192)
T 2rfm_A 6 KNGEIVEKIKDEKSINQNLDFLRNY-RDSYNRTPLMVACMLGMENAIDKLVEN-----------FDKLEDKDIEGSTALI 73 (192)
T ss_dssp ----CGGGGSSHHHHHHTHHHHHTC-CCTTCCCHHHHHHHHTCGGGHHHHHHH-----------HCCTTCCCTTSCCHHH
T ss_pred ccccHHHHhhhhhhhhhhhHHHHhC-cCCCCCCHHHHHHHcCCHHHHHHHHHh-----------ccccccccccCccHHH
Confidence 3444443333222222334455544 2344899999 9999999999999998 5555566667777777
Q ss_pred HHHHcCcHHHHHHHHHCCCCCCCCCCCCCccc
Q psy4451 85 LAAQLGRLEIVALLLERGHCIPYPHLPTCQCV 116 (256)
Q Consensus 85 lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~ 116 (256)
.|+..|+.+++++|++.|++++.++..+.++.
T Consensus 74 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 105 (192)
T 2rfm_A 74 WAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPL 105 (192)
T ss_dssp HHHHTTCHHHHHHHHHHTCCTTCCCTTSCCHH
T ss_pred HHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHH
Confidence 77777777777777777777776666666554
No 36
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.73 E-value=8.1e-18 Score=142.64 Aligned_cols=104 Identities=23% Similarity=0.226 Sum_probs=77.5
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCC-CC--------------------------------------------c
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSI-KV--------------------------------------------R 36 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~-~~--------------------------------------------g 36 (256)
...|.+|+||||+|+..|+.+++++|+++ |+ ++ |
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~~~g 183 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKASQAG 183 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCTTTC
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccCCCC
Confidence 45789999999999999999999999998 43 22 3
Q ss_pred hhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCc
Q psy4451 37 DGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLE-RGHCIPYPHLPTCQ 114 (256)
Q Consensus 37 ~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~-~ga~i~~~~~~~~~ 114 (256)
.|||| |+..|+.+++++|+++ |.+.+.++..|.||||+|+..|+.+++++|++ .|++++..+..+.+
T Consensus 184 ~tpLh~A~~~g~~~~v~~Ll~~-----------gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~T 252 (276)
T 4hbd_A 184 QTALMLAVSHGRVDVVKALLAC-----------EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGST 252 (276)
T ss_dssp CCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCC
T ss_pred CCHHHHHHHcCCHHHHHHHHhC-----------CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCC
Confidence 45666 6666666666666666 55666677777777777777777777777777 67777777666666
Q ss_pred ccc
Q psy4451 115 CVQ 117 (256)
Q Consensus 115 ~~~ 117 (256)
+..
T Consensus 253 pL~ 255 (276)
T 4hbd_A 253 ALM 255 (276)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 37
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.73 E-value=1.5e-17 Score=135.42 Aligned_cols=113 Identities=16% Similarity=0.093 Sum_probs=66.6
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc---------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESE--------- 66 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~--------- 66 (256)
..|.+|+||||.|+..|+.+++++|++++..++ |.|||| |+..|+.++++.|+++|++.+....
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 132 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWA 132 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHH
Confidence 456778888888888888888888887632122 667887 8888888888888877443221000
Q ss_pred -------------ccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcc
Q psy4451 67 -------------FKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQC 115 (256)
Q Consensus 67 -------------~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~ 115 (256)
..|.+.+.++..|.||||.|+..|+.+++++|+++|++++..+..+.++
T Consensus 133 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~ 194 (223)
T 2f8y_A 133 AAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLP 194 (223)
T ss_dssp HHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCH
Confidence 0134444445555555555555555555555555555555444444433
No 38
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.73 E-value=2.8e-17 Score=139.74 Aligned_cols=60 Identities=27% Similarity=0.385 Sum_probs=53.2
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHK 62 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~ 62 (256)
...|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++|++.+
T Consensus 67 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 133 (299)
T 1s70_B 67 NYANVDGLTALHQACIDDNVDMVKFLVEN-GANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVG 133 (299)
T ss_dssp TCBCTTCCBHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCC
Confidence 46788999999999999999999999998 6655 789999 999999999999999987653
No 39
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.73 E-value=2.4e-17 Score=135.54 Aligned_cols=115 Identities=21% Similarity=0.146 Sum_probs=77.2
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc----------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES---------- 65 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~---------- 65 (256)
..|..|.||||.|+..|+.+++++|++++..++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 72 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 151 (237)
T 3b7b_A 72 PKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWA 151 (237)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHH
Confidence 456778888888888888888888887732332 667887 888888888888888755432110
Q ss_pred ------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 ------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 ------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+..+..|.||||.|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 152 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~ 215 (237)
T 3b7b_A 152 AFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215 (237)
T ss_dssp HHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred HHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCCccCCCCCCHHH
Confidence 0125555666666777777777777777777777777777666666666555
No 40
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.73 E-value=8.5e-18 Score=131.84 Aligned_cols=100 Identities=19% Similarity=0.182 Sum_probs=86.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||+|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------ga~~~~ 130 (172)
T 3v30_A 63 HILAKERESALSLASTGGYTDIVGLLLER-DVDINIYDWNGGTPLLYAVRGNHVKCVEALLAR-----------GADLTT 130 (172)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred hhhcccCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCccc
Confidence 45688999999999999999999999998 6654 789999 9999999999999999 677778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTC 113 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~ 113 (256)
++..|.||||+|+..|+.+++++|+++|+++..+...+.
T Consensus 131 ~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~~~~~~~~~ 169 (172)
T 3v30_A 131 EADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPA 169 (172)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHHHHHSCC-----
T ss_pred cCCCCCCHHHHHHHhCcHHHHHHHHHHHHHHhcccCCCC
Confidence 889999999999999999999999999998776654433
No 41
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.73 E-value=1.7e-17 Score=137.58 Aligned_cols=102 Identities=18% Similarity=0.231 Sum_probs=87.0
Q ss_pred CCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCC
Q psy4451 6 FQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPK 78 (256)
Q Consensus 6 ~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 78 (256)
..|.||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++..
T Consensus 35 ~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~~~d~~ 102 (239)
T 1ycs_B 35 PLPLALLLDSSLEGEFDLVQRIIYE-VDDPSLPNDEGITALHNAVCAGHTEIVKFLVQF-----------GVNVNAADSD 102 (239)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTST-TSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-----------TCCTTCCCTT
T ss_pred chhhHHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCccCCC
Confidence 4578999999999999999999988 5554 789999 9999999999999998 7778888999
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC-cccccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTC-QCVQVC 119 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~-~~~~~~ 119 (256)
|.||||.|+..|+.+++++|+++|++++.....+. ++...|
T Consensus 103 g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a 144 (239)
T 1ycs_B 103 GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKC 144 (239)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHH
Confidence 99999999999999999999999999997765554 555533
No 42
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.72 E-value=2.3e-17 Score=136.19 Aligned_cols=103 Identities=18% Similarity=0.140 Sum_probs=90.3
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.+..|.||||.|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+..+
T Consensus 17 ~~~~~~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-----------ga~~n~~d 84 (229)
T 2vge_A 17 ARLNPLVLLLDAALTGELEVVQQAVKE-MNDPSQPNEEGITALHNAICGANYSIVDFLITA-----------GANVNSPD 84 (229)
T ss_dssp TTSCHHHHHHHHHHHTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCC
T ss_pred cccchhHHHHHHHHcCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-----------CCCCCCCC
Confidence 355677899999999999999999998 5554 789999 9999999999999999 67777888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPH-LPTCQCVQV 118 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~-~~~~~~~~~ 118 (256)
..|.||||+|+..|+.+++++|++.|++++... ..+.++...
T Consensus 85 ~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~ 127 (229)
T 2vge_A 85 SHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEK 127 (229)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGG
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHH
Confidence 899999999999999999999999999999875 367777663
No 43
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.72 E-value=6.2e-18 Score=140.81 Aligned_cols=105 Identities=20% Similarity=0.129 Sum_probs=91.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC-CC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF-PK 78 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~-~~ 78 (256)
+.+|+||||.|+.+|+.++++.|++..+++. |.|||| |+..|+.+++++|+++ |.+.+..+ ..
T Consensus 42 ~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~~~~~~~ 110 (244)
T 3ui2_A 42 VSEYETPWWTAARKADEQALSQLLEDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEA-----------GADLDHRDMRG 110 (244)
T ss_dssp HHHHHHHHHHHHTTTCHHHHHHTTTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCSSS
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc-----------CCCCCcCCCCC
Confidence 4578999999999999999999998312222 889999 9999999999999999 66666666 77
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVCQ 120 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~~ 120 (256)
|.||||+|+..|+.+++++|+++|++++..+..+.++...+.
T Consensus 111 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 111 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAR 152 (244)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Confidence 999999999999999999999999999998888888877443
No 44
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.72 E-value=7.6e-18 Score=143.39 Aligned_cols=104 Identities=25% Similarity=0.218 Sum_probs=92.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
...|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+..+
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~~~d 92 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNA-GALKNLLENEFPLHQAATLEDTKIVKILLFS-----------GLDDSQFD 92 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TGGGSCCTTCCHHHHHTTSSSCHHHHHHHHT-----------TCCTTCCC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-----------CCCCCCcC
Confidence 56789999999999999999999999999 6655 789999 9999999999999999 66777888
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC-Ccccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPT-CQCVQ 117 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~-~~~~~ 117 (256)
..|.||||+|+..|+.+++++|+++|++++.....+ .++..
T Consensus 93 ~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~ 134 (285)
T 3kea_A 93 DKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFY 134 (285)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHH
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHH
Confidence 899999999999999999999999999999777766 55544
No 45
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.72 E-value=2.2e-17 Score=140.38 Aligned_cols=94 Identities=23% Similarity=0.148 Sum_probs=85.3
Q ss_pred cCCCCChHHHHHHHh---CCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 4 LLFQGVSALQTAIIK---NDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 4 ~d~~G~taLh~A~~~---~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
.|..|+||||+|+.. |+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |++.+
T Consensus 165 ~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-----------gad~~ 232 (278)
T 1dcq_A 165 GHEPDETALHLAVRSVDRTSLHIVDFLVQN-SGNLDKQTGKGSTALHYCCLTDNAECLKLLLRG-----------KASIE 232 (278)
T ss_dssp CSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-CSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTT
T ss_pred cccCCCCcchHHHHhcccchHHHHHHHHHC-CCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCC
Confidence 478899999999999 899999999998 6665 889999 9999999999999999 77788
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPH 109 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~ 109 (256)
.++..|.||||+|+..|+.+++++|+++|++....+
T Consensus 233 ~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~ 268 (278)
T 1dcq_A 233 IANESGETPLDIAKRLKHEHCEELLTQALSGRFNSH 268 (278)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCCSS
T ss_pred CccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcc
Confidence 889999999999999999999999999999654433
No 46
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.72 E-value=2.5e-17 Score=128.32 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=90.6
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|.+|.||||.|+..|+.++++.|++..+.+. |.|||| |+..|+.+++++|+++ |.+.+..
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~ 71 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQH-----------GADVHAK 71 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCC
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhc-----------CCCCCcc
Confidence 357889999999999999999999999644333 679999 9999999999999999 6677788
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
+..|.||||.|+..|+.+++++|+++|++++.++..+.++..
T Consensus 72 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 113 (165)
T 3twr_A 72 DKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLH 113 (165)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHH
T ss_pred CCCCCCHHHHHHHcCcHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 889999999999999999999999999999988877776654
No 47
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.72 E-value=1e-17 Score=139.63 Aligned_cols=101 Identities=21% Similarity=0.157 Sum_probs=89.4
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------------------chhHHH-HHHcCCHHHHHHHHh---CCcCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------------------RDGALH-AIQCDEINILKLILD---WQKCH 61 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------------------g~t~L~-A~~~g~~~~v~~Ll~---~~~~~ 61 (256)
|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++ +
T Consensus 87 d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~---- 161 (256)
T 2etb_A 87 FYQGHSALHIAIEKRSLQCVKLLVEN-GADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ---- 161 (256)
T ss_dssp TTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC----
T ss_pred cccCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc----
Confidence 46799999999999999999999999 5543 779999 999999999999999 7
Q ss_pred CCCccccCCCCCCCCCCCCcHHHHHHH--cCcHH-------HHHHHHHCCCCC-------CCCCCCCCcccc
Q psy4451 62 KPESEFKGHCNSNDFPKCITPLMLAAQ--LGRLE-------IVALLLERGHCI-------PYPHLPTCQCVQ 117 (256)
Q Consensus 62 ~~~~~~~~~~~~~~~~~g~TpL~lAa~--~g~~e-------iv~~Ll~~ga~i-------~~~~~~~~~~~~ 117 (256)
|.+.+.++..|.||||+|+. .++.+ ++++|+++|+++ +..+..+.++..
T Consensus 162 -------ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 226 (256)
T 2etb_A 162 -------PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLK 226 (256)
T ss_dssp -------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHH
T ss_pred -------CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHH
Confidence 77788899999999999999 88888 999999999999 666666666655
No 48
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.71 E-value=3.7e-17 Score=131.01 Aligned_cols=104 Identities=22% Similarity=0.214 Sum_probs=60.1
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ .+.+.+..
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~----------~~~~~~~~ 102 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDR-GADINLQNSISDSPYLYAGAQGRTEILAYMLKH----------ATPDLNKH 102 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHH----------SCCCTTCC
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhc----------cCcccccc
Confidence 3455666666666666666666666665 4433 456666 6666666666666633 13344555
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERG-HCIPYPHLPTCQCVQ 117 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~g-a~i~~~~~~~~~~~~ 117 (256)
+..|.||||.|+..|+.+++++|+++| ++++.++..+.++..
T Consensus 103 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~ 145 (201)
T 3hra_A 103 NRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALI 145 (201)
T ss_dssp CTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHH
T ss_pred cCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHH
Confidence 555666666666666666666666665 555555554444433
No 49
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.71 E-value=2.7e-17 Score=131.89 Aligned_cols=106 Identities=21% Similarity=0.129 Sum_probs=93.8
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccC-CCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKG-HCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~-~~~~ 73 (256)
...|..|+||||.|+..|+.+++++|+++.+.++ |.|||| |+..|+.+++++|+++ + .+.+
T Consensus 66 ~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 134 (201)
T 3hra_A 66 NLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLED-----------GREDID 134 (201)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHH-----------CCCCTT
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHc-----------CCCCcC
Confidence 4578899999999999999999999996534443 789999 9999999999999998 4 6778
Q ss_pred CCCCCCCcHHHHHHHcCc-----HHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 74 NDFPKCITPLMLAAQLGR-----LEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~-----~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
.++..|.||||.|+..++ .+++++|+++|++++..+..+.++...
T Consensus 135 ~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~ 184 (201)
T 3hra_A 135 FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDY 184 (201)
T ss_dssp CCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred CCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHHHH
Confidence 889999999999999998 999999999999999988888877663
No 50
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.71 E-value=4e-17 Score=133.89 Aligned_cols=103 Identities=21% Similarity=0.206 Sum_probs=89.8
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------------------chhHHH-HHHcCCHHHHHHHHhCCcCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------------------RDGALH-AIQCDEINILKLILDWQKCHK 62 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------------------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~ 62 (256)
..|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++
T Consensus 70 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----- 143 (232)
T 2rfa_A 70 SELYEGQTALHIAVINQNVNLVRALLAR-GASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH----- 143 (232)
T ss_dssp STTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-----
T ss_pred ccCCCCcCHHHHHHHcCCHHHHHHHHhC-CCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-----
Confidence 4577999999999999999999999998 5442 779999 9999999999999999
Q ss_pred CCccccCCCCCCCCCCCCcHHHHHHHcCcHHHH----HHHHHCCCCCC------CCCCCCCcccc
Q psy4451 63 PESEFKGHCNSNDFPKCITPLMLAAQLGRLEIV----ALLLERGHCIP------YPHLPTCQCVQ 117 (256)
Q Consensus 63 ~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv----~~Ll~~ga~i~------~~~~~~~~~~~ 117 (256)
|.+.+.++..|.||||+|+..|+.+++ ++|++.|++.+ ..+..+.++..
T Consensus 144 ------ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~~~~~~~g~tpl~ 202 (232)
T 2rfa_A 144 ------GADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSLELVPNNQGLTPFK 202 (232)
T ss_dssp ------TCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCGGGCCCTTSCCHHH
T ss_pred ------CCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhhhccCCCCCCCHHH
Confidence 777888899999999999999999988 99999999884 45555555554
No 51
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.71 E-value=8e-17 Score=139.23 Aligned_cols=104 Identities=26% Similarity=0.212 Sum_probs=89.1
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 52 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~-----------g~~~~~ 119 (351)
T 3utm_A 52 HASDGRKSTPLHLAAGYNRVRIVQLLLQH-GADVHAKDKGGLVPLHNACSYGHYEVTELLLKH-----------GACVNA 119 (351)
T ss_dssp CCSSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred ccCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHC-----------CCCCCC
Confidence 35678899999999999999999999998 6654 779998 9999999999999998 666777
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.+..|.||||.|+..|+.+++++|+++|++++.....+.++..
T Consensus 120 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~ 162 (351)
T 3utm_A 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVD 162 (351)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchH
Confidence 8888999999999999999999999999998877766655543
No 52
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.71 E-value=1.3e-17 Score=139.04 Aligned_cols=114 Identities=19% Similarity=0.134 Sum_probs=91.0
Q ss_pred ccCCCCChHHHHHHHh---CCHHHHHHHhcCCCCC-----------------CchhHHH-HHHcCCHHHHHHHHhCCcCC
Q psy4451 3 YLLFQGVSALQTAIIK---NDVMMVKYLLSLPSIK-----------------VRDGALH-AIQCDEINILKLILDWQKCH 61 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~---~~~~~v~~Ll~~~~~~-----------------~g~t~L~-A~~~g~~~~v~~Ll~~~~~~ 61 (256)
..|.+|+||||+|+.+ |+.+++++|+++ +++ .|.|||| |+..|+.+++++|+++|++.
T Consensus 38 ~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~ 116 (256)
T 2etb_A 38 TEGSTGKTCLMKAVLNLQDGVNACIMPLLQI-DKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV 116 (256)
T ss_dssp SBTTTTBCHHHHHHHTCBTTBCTTHHHHHHH-HHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred cCCCCCCCHHHHHHHccccchHHHHHHHHhc-CCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence 3689999999999999 999999999987 321 2789999 99999999999999996554
Q ss_pred CCCccc--cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcccc
Q psy4451 62 KPESEF--KGHCNSNDFPKCITPLMLAAQLGRLEIVALLLE---RGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 62 ~~~~~~--~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~---~ga~i~~~~~~~~~~~~ 117 (256)
+..... ...+.+..+..|.||||.|+..|+.+++++|++ .|++++..+..+.++..
T Consensus 117 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh 177 (256)
T 2etb_A 117 HLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLH 177 (256)
T ss_dssp TCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred CcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHH
Confidence 322110 001112223349999999999999999999999 99999998888888776
No 53
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.71 E-value=7.7e-17 Score=131.94 Aligned_cols=102 Identities=25% Similarity=0.196 Sum_probs=79.4
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|.+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++| .+.+..
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-----------~~~~~~ 102 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQL-GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKG-----------AHVNAV 102 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-----------CCTTCC
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHh-CCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcC-----------CCCCCC
Confidence 4688999999999999999999999998 5554 789999 99999999999999994 445555
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCV 116 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~ 116 (256)
+..|.||||.|+..|+.+++++|+++|++++..+..+.++.
T Consensus 103 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L 143 (231)
T 3aji_A 103 NQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAM 143 (231)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHH
Confidence 56666666666666666666666666666665555554443
No 54
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.70 E-value=7.5e-17 Score=126.37 Aligned_cols=89 Identities=18% Similarity=0.205 Sum_probs=81.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 74 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~ 141 (169)
T 2y1l_E 74 NAVDHAGMTPLRLAALFGHLEIVEVLLKN-GADVNANDMEGHTPLHLAAMFGHLEIVEVLLKN-----------GADVNA 141 (169)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 35688999999999999999999999998 6654 789999 9999999999999999 667778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERG 102 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~g 102 (256)
++..|.||+++|+..|+.+++++|++.|
T Consensus 142 ~~~~g~t~l~~A~~~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 142 QDKFGKTAFDISIDNGNEDLAEILQKLN 169 (169)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTC-
T ss_pred cCCCCCCHHHHHHHhCCHHHHHHHHHcC
Confidence 8899999999999999999999999886
No 55
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.70 E-value=9.3e-17 Score=134.62 Aligned_cols=116 Identities=15% Similarity=0.087 Sum_probs=88.4
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc---------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-----RDGALH-AIQCDEINILKLILDWQKCHKPESE--------- 66 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~--------- 66 (256)
...|.+|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.++++.|+++|++.+....
T Consensus 63 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A 141 (261)
T 2xai_A 63 NGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLA 141 (261)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHH
Confidence 45688899999999999999999999998 5554 778998 9999999999999998776542110
Q ss_pred -------------ccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccccc
Q psy4451 67 -------------FKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 67 -------------~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~ 119 (256)
..|.+.+. +..|.||||.|+..|+.+++++|+++|++++..+..+.++.+.+
T Consensus 142 ~~~~~~~~v~~Ll~~g~~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A 206 (261)
T 2xai_A 142 CENQQRACVKKLLESGADVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQAKNAEGKRPVELV 206 (261)
T ss_dssp HHTTCHHHHHHHHHHTCCTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCGGGGS
T ss_pred HHhCCHHHHHHHHHcCCCCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCChhhhc
Confidence 12445553 66777888888888888888888888888887777777776633
No 56
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.70 E-value=5.5e-17 Score=126.57 Aligned_cols=99 Identities=14% Similarity=0.091 Sum_probs=89.1
Q ss_pred CCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCC
Q psy4451 7 QGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKC 79 (256)
Q Consensus 7 ~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g 79 (256)
.|.||||.|+..|+.++++.|++. +.++ |.|||| |+..|+.+++++|+++ |.+.+..+..|
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~~~g 69 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ-ENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQN-----------GADPQLLGKGR 69 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH-SSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCTTC
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHc-----------CCCCCCcCCCC
Confidence 589999999999999999999998 4443 789999 9999999999999999 66677788899
Q ss_pred CcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 80 ITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 80 ~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.||||.|+..|+.+++++|++.|++++.++..+.++..
T Consensus 70 ~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 107 (167)
T 3v31_A 70 ESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLL 107 (167)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHH
T ss_pred CcHHHHHHHcCCHHHHHHHHHCCCCCCcCCCCCCCHHH
Confidence 99999999999999999999999999988877777655
No 57
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.70 E-value=7.8e-17 Score=139.78 Aligned_cols=115 Identities=19% Similarity=0.149 Sum_probs=87.7
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCC---HHHHHHHHhCC-cCCCC-------Cc
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDE---INILKLILDWQ-KCHKP-------ES 65 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~---~~~v~~Ll~~~-~~~~~-------~~ 65 (256)
.|.+|+||||+|+..|+.++|++|+++ |+++ |.|||| |+..|+ .++++.|++++ ++.+. ..
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~-Gad~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpL 205 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKH-GSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTIL 205 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHH
Confidence 789999999999999999999999999 6665 667777 777666 34444444433 11100 00
Q ss_pred ccc---------------------------------------C-------------------------CCCCCCCCCCCc
Q psy4451 66 EFK---------------------------------------G-------------------------HCNSNDFPKCIT 81 (256)
Q Consensus 66 ~~~---------------------------------------~-------------------------~~~~~~~~~g~T 81 (256)
++. + .+.+.++..|.|
T Consensus 206 h~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~T 285 (327)
T 1sw6_A 206 HHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 285 (327)
T ss_dssp HHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCC
T ss_pred HHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCC
Confidence 000 0 047788999999
Q ss_pred HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccccc
Q psy4451 82 PLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 82 pL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~~ 119 (256)
|||+|+..|+.+++++|+++|++++..+..+.++..++
T Consensus 286 pLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A 323 (327)
T 1sw6_A 286 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323 (327)
T ss_dssp HHHHHHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence 99999999999999999999999999999898888743
No 58
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.70 E-value=5.3e-17 Score=118.58 Aligned_cols=83 Identities=18% Similarity=0.152 Sum_probs=75.4
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
+|.+|+||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.++
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-----------ga~~~~~d 87 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMAN-GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEA-----------GADVXAQD 87 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCC
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHc-CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCccccc
Confidence 678999999999999999999999998 5654 789999 9999999999999999 77778889
Q ss_pred CCCCcHHHHHHHcCcHHHHHHH
Q psy4451 77 PKCITPLMLAAQLGRLEIVALL 98 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~L 98 (256)
..|.||||+|+..|+.+++++|
T Consensus 88 ~~g~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 88 KFGKTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHH
T ss_pred cCCCcHHHHHHHcCCHHHHHHh
Confidence 9999999999999999999987
No 59
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.70 E-value=5e-17 Score=135.56 Aligned_cols=114 Identities=16% Similarity=0.061 Sum_probs=88.2
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCc-CCCCCc---------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQK-CHKPES--------- 65 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~-~~~~~~--------- 65 (256)
..|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++++ +.+...
T Consensus 52 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~ 130 (253)
T 1yyh_A 52 QTDRTGETALHLAARYSRSDAAKRLLEA-SADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLIL 130 (253)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHH
Confidence 3589999999999999999999999998 6655 789999 999999999999999875 322110
Q ss_pred -------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 -------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 -------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+..+..|.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 131 A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~ 195 (253)
T 1yyh_A 131 AARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 195 (253)
T ss_dssp HHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred HHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 0135666677777777777777777777777777777777766666655544
No 60
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.70 E-value=1.2e-16 Score=130.41 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=84.6
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCC--CC-------CchhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPS--IK-------VRDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCN 72 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~--~~-------~g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 72 (256)
..|.+|+||||+|+..|+.+++++|+++ + .+ .|.|||| |+..|+.++++.|+++|. ..+.
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~---------~~~~ 100 (228)
T 2dzn_A 31 QKDQDGRIPLHWSVSFQAHEITSFLLSK-MENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPL---------KPDL 100 (228)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-CTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSS---------CCCT
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhc-cccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCC---------Cccc
Confidence 4689999999999999999999999998 4 32 2889999 999999999999999852 1455
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 73 SNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 73 ~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
+..+..|.||||.|+..|+.+++++|+++|++++.++..+.++..
T Consensus 101 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~ 145 (228)
T 2dzn_A 101 NKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLH 145 (228)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred ccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHH
Confidence 566677777888877777778888777777777777666666543
No 61
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.69 E-value=6.1e-17 Score=145.10 Aligned_cols=114 Identities=22% Similarity=0.163 Sum_probs=75.3
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc----------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES---------- 65 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~---------- 65 (256)
..|..|.||||.|+.+|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 240 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A 318 (437)
T 1n11_A 240 AESVQGVTPLHLAAQEGHAEMVALLLSK-QANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVA 318 (437)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCCCCCCCCCHHHHH
Confidence 4567778888888888888888888877 4443 667777 777777777777777754432110
Q ss_pred ------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 66 ------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 66 ------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
...|.+.+.++..|.||||+|++.|+.+++++|+++|++++..+..+.++.+
T Consensus 319 ~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~ 382 (437)
T 1n11_A 319 SHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLA 382 (437)
T ss_dssp HHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHH
T ss_pred HHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence 0125555666666666666666666666666666666666666665555554
No 62
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.69 E-value=7.6e-17 Score=135.50 Aligned_cols=115 Identities=22% Similarity=0.127 Sum_probs=90.6
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc---------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES--------- 65 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~--------- 65 (256)
...|..|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++++++.....
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 117 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVEKLYAA-GAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQ 117 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC---------
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhccc
Confidence 35688999999999999999999999999 6665 789999 999999999999999876532110
Q ss_pred ---------------------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC-CCcccc
Q psy4451 66 ---------------------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLP-TCQCVQ 117 (256)
Q Consensus 66 ---------------------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~-~~~~~~ 117 (256)
...+.+.+..+..|.||||.|+..|+.+++++|+++|++++..... +.++..
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 197 (282)
T 1oy3_D 118 DCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLH 197 (282)
T ss_dssp --------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred ccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHH
Confidence 0113446677888888888888888888888888888888876643 555543
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.69 E-value=6.2e-17 Score=124.67 Aligned_cols=98 Identities=21% Similarity=0.206 Sum_probs=88.4
Q ss_pred CChHHHHHHHhCCHHHHHHHhcCCCCCC-----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCc
Q psy4451 8 GVSALQTAIIKNDVMMVKYLLSLPSIKV-----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCIT 81 (256)
Q Consensus 8 G~taLh~A~~~~~~~~v~~Ll~~~~~~~-----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~T 81 (256)
+.||||.|+..|+.+++++|+++ +.+. |.|||| |+..|+.+++++|+++ |.+.+..+..|.|
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~~~g~t 69 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRA-----------GVSRDARTKVDRT 69 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTT-----------TCCTTCCCTTCCC
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCCCCCCCCC
Confidence 46899999999999999999998 5543 789999 9999999999999998 6677788889999
Q ss_pred HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 82 PLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 82 pL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
|||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 70 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 105 (153)
T 1awc_B 70 PLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALH 105 (153)
T ss_dssp HHHHHHHHTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred HHHHHHHcChHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 999999999999999999999999988877777655
No 64
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.69 E-value=5.6e-17 Score=133.54 Aligned_cols=115 Identities=20% Similarity=0.109 Sum_probs=81.0
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCC---CCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc------
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPS---IKV------RDGALH-AIQCDEINILKLILDWQKCHKPESE------ 66 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~---~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~------ 66 (256)
.+|.+|+||||.|+..|+.++++.|++... .++ |.|||| |+..|+.+++++|+++|++.+....
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L 82 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPL 82 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCCCHH
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence 579999999999999999999999998721 122 789999 9999999999999999776542110
Q ss_pred ----------------ccCCC------CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC-CCCcccc
Q psy4451 67 ----------------FKGHC------NSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHL-PTCQCVQ 117 (256)
Q Consensus 67 ----------------~~~~~------~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~-~~~~~~~ 117 (256)
..+.+ .+..+..|.||||.|+..|+.+++++|+++|++++.... .+.++..
T Consensus 83 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~ 156 (236)
T 1ikn_D 83 HLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALH 156 (236)
T ss_dssp HHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHH
T ss_pred HHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHH
Confidence 01111 345566777777777777777777777777777776655 5555543
No 65
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.69 E-value=1.6e-16 Score=129.38 Aligned_cols=104 Identities=17% Similarity=0.048 Sum_probs=68.6
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCc-----------
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPES----------- 65 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~----------- 65 (256)
.|..|.||||.|+..++.+++++|+++ ++++ |.|||| |+..|+.+++++|+++|++.+...
T Consensus 88 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~ 166 (223)
T 2f8y_A 88 RMHDGTTPLILAARLAVEGMLEDLINS-HADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAA 166 (223)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCCCCCcHHHHHHHhCcHHHHHHHHHc-CCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHH
Confidence 345555666666666666666655555 3332 455555 555555555555555555432110
Q ss_pred -----------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC
Q psy4451 66 -----------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYP 108 (256)
Q Consensus 66 -----------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~ 108 (256)
...|.+.+.++..|.||+++|+..|+.+++++|+++|+....+
T Consensus 167 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~~~ 220 (223)
T 2f8y_A 167 REGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRSPQ 220 (223)
T ss_dssp HHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSCC-
T ss_pred HcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcccc
Confidence 0136778888999999999999999999999999999976654
No 66
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.69 E-value=2e-17 Score=138.14 Aligned_cols=101 Identities=16% Similarity=0.114 Sum_probs=87.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC--------------------chhHHH-HHHcCCHHHHHHHHh---CCcC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV--------------------RDGALH-AIQCDEINILKLILD---WQKC 60 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~--------------------g~t~L~-A~~~g~~~~v~~Ll~---~~~~ 60 (256)
|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++ +
T Consensus 90 d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~--- 165 (260)
T 3jxi_A 90 YYRGQTALHIAIERRCKHYVELLVEK-GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHK--- 165 (260)
T ss_dssp SEESBCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSC---
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhC-CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc---
Confidence 45899999999999999999999998 4432 679999 999999999999999 6
Q ss_pred CCCCccccCCCCCCCCCCCCcHHHHHHHcCc---------HHHHHHHHHCCCCC-------CCCCCCCCcccc
Q psy4451 61 HKPESEFKGHCNSNDFPKCITPLMLAAQLGR---------LEIVALLLERGHCI-------PYPHLPTCQCVQ 117 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~---------~eiv~~Ll~~ga~i-------~~~~~~~~~~~~ 117 (256)
|.+.+.++..|.||||+|+..++ .+++++|+++|+++ +..+..+.++..
T Consensus 166 --------ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~ 230 (260)
T 3jxi_A 166 --------QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLM 230 (260)
T ss_dssp --------CCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred --------CCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHH
Confidence 77788889999999999998887 79999999999998 445556666554
No 67
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.69 E-value=1.1e-17 Score=138.24 Aligned_cols=99 Identities=17% Similarity=0.193 Sum_probs=88.1
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 48 ~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-ga~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~-----------ga~~~~ 115 (229)
T 2vge_A 48 SQPNEEGITALHNAICGANYSIVDFLITA-GANVNSPDSHGWTPLHCAASCNDTVICMALVQH-----------GAAIFA 115 (229)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTT-----------TCCTTC
T ss_pred CCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCccc
Confidence 45789999999999999999999999999 6665 789999 9999999999999999 666666
Q ss_pred CC-CCCCcHHHHH--HHcCcHHHHHHHHHCCCCCCCCCCCC
Q psy4451 75 DF-PKCITPLMLA--AQLGRLEIVALLLERGHCIPYPHLPT 112 (256)
Q Consensus 75 ~~-~~g~TpL~lA--a~~g~~eiv~~Ll~~ga~i~~~~~~~ 112 (256)
.+ ..|.||||+| +..|+.+++++|++.|++++..+..+
T Consensus 116 ~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~ 156 (229)
T 2vge_A 116 TTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGA 156 (229)
T ss_dssp CCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGE
T ss_pred ccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCc
Confidence 65 5899999999 99999999999999999998765443
No 68
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.69 E-value=1.3e-16 Score=125.98 Aligned_cols=101 Identities=19% Similarity=0.102 Sum_probs=87.8
Q ss_pred CCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCC
Q psy4451 6 FQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPK 78 (256)
Q Consensus 6 ~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 78 (256)
.++.+|||.|+..|+.++++.|+++.+.++ |.|||| |+..|+.+++++|+++ |.+.+..+..
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~~~ 71 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR-----------GARINVMNRG 71 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCTT
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHc-----------CCCCCCcCCC
Confidence 568899999999999999999999844433 789999 9999999999999999 6677788889
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
|.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 72 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~ 110 (179)
T 3f6q_A 72 DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLH 110 (179)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 999999999999999999999999999988887777754
No 69
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.69 E-value=4e-17 Score=143.00 Aligned_cols=107 Identities=15% Similarity=0.099 Sum_probs=94.3
Q ss_pred cCCCCChHHHHHHHhC--CHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKN--DVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~--~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
.|.+|.||||+|+..| +.+++++|+++ |+++ |.|||| |+..|+.+++++|+++|++.. +.+.+.
T Consensus 134 ~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~------~~~~~~ 206 (364)
T 3ljn_A 134 KHCKGQTALHWCVGLGPEYLEMIKILVQL-GASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS------SLRLDY 206 (364)
T ss_dssp EEESCCCHHHHHHHSCGGGHHHHHHHHHH-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS------SCCTTC
T ss_pred CCCCCCCHHHHHHHcCCchHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc------cccccc
Confidence 6788999999999999 99999999998 6665 789999 999999999999999955422 334778
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.+..|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 207 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~ 249 (364)
T 3ljn_A 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLY 249 (364)
T ss_dssp CCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTTCCCTTSCCHHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence 8899999999999999999999999999999988887777765
No 70
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.69 E-value=4.4e-17 Score=137.17 Aligned_cols=102 Identities=18% Similarity=0.152 Sum_probs=87.6
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC--------------------chhHHH-HHHcCCHHHHHHHHh---CCc
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV--------------------RDGALH-AIQCDEINILKLILD---WQK 59 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~--------------------g~t~L~-A~~~g~~~~v~~Ll~---~~~ 59 (256)
.|.+|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++ +
T Consensus 97 ~d~~g~tpL~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~-- 173 (273)
T 2pnn_A 97 SYYKGQTALHIAIERRNMTLVTLLVEN-GADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQ-- 173 (273)
T ss_dssp TTTTTCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSC--
T ss_pred ccCCCCCHHHHHHHcCCHHHHHHHHHC-CCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccC--
Confidence 456899999999999999999999998 5542 679999 999999999999999 7
Q ss_pred CCCCCccccCCCCCCCCCCCCcHHHHHHHcCc---------HHHHHHHHHCCCCCCC-------CCCCCCcccc
Q psy4451 60 CHKPESEFKGHCNSNDFPKCITPLMLAAQLGR---------LEIVALLLERGHCIPY-------PHLPTCQCVQ 117 (256)
Q Consensus 60 ~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~---------~eiv~~Ll~~ga~i~~-------~~~~~~~~~~ 117 (256)
|.+.+.++..|.||||+|+..|+ .+++++|+++|++++. .+..+.++..
T Consensus 174 ---------gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~ 238 (273)
T 2pnn_A 174 ---------PADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLA 238 (273)
T ss_dssp ---------CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHH
T ss_pred ---------CCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHH
Confidence 77778888999999999999888 7999999999998863 4555555544
No 71
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.69 E-value=7.4e-18 Score=135.00 Aligned_cols=102 Identities=9% Similarity=0.066 Sum_probs=89.1
Q ss_pred CCCChHHHHHHHhCCH----HHHHHHhcCCCCCC------chhHHH-HHHcCC------HHHHHHHHhCCcCCCCCcccc
Q psy4451 6 FQGVSALQTAIIKNDV----MMVKYLLSLPSIKV------RDGALH-AIQCDE------INILKLILDWQKCHKPESEFK 68 (256)
Q Consensus 6 ~~G~taLh~A~~~~~~----~~v~~Ll~~~~~~~------g~t~L~-A~~~g~------~~~v~~Ll~~~~~~~~~~~~~ 68 (256)
.+|+||||+|+.+++. +++++|+++ |+++ |.|||| |+..|+ .+++++|+++
T Consensus 36 ~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-Gadvn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~----------- 103 (186)
T 3t8k_A 36 VLKSNILYDVLRNNNDEARYKISMFLINK-GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK----------- 103 (186)
T ss_dssp HHTTTHHHHHTTCSCHHHHHHHHHHHHHT-TCCSSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-----------
T ss_pred cCCCCHHHHHHHcCCcchHHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-----------
Confidence 6799999999999985 599999999 7776 889999 999887 6889999999
Q ss_pred CCCCCCCCCCCC-cHHHHHHHcC-----cHHHHHHHHH-CCCCCCCCCCCCCcccccc
Q psy4451 69 GHCNSNDFPKCI-TPLMLAAQLG-----RLEIVALLLE-RGHCIPYPHLPTCQCVQVC 119 (256)
Q Consensus 69 ~~~~~~~~~~g~-TpL~lAa~~g-----~~eiv~~Ll~-~ga~i~~~~~~~~~~~~~~ 119 (256)
|++.+.++..|. ||||.|+..+ +.+++++|++ .|++++..+..+.++.+.+
T Consensus 104 Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A 161 (186)
T 3t8k_A 104 GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFV 161 (186)
T ss_dssp TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHH
T ss_pred CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHH
Confidence 777888899999 9999999844 4679999999 9999999999888887744
No 72
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.68 E-value=2.3e-16 Score=132.24 Aligned_cols=55 Identities=24% Similarity=0.263 Sum_probs=28.4
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCc
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQK 59 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~ 59 (256)
.|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++|+
T Consensus 32 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~ 93 (261)
T 2xai_A 32 ITADHVSPLHEACLGGHLSCVKILLKH-GAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGA 93 (261)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCC
Confidence 444555555555555555555555554 3332 445555 555555555555555543
No 73
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.68 E-value=3.5e-17 Score=136.58 Aligned_cols=113 Identities=20% Similarity=0.163 Sum_probs=92.4
Q ss_pred cCCCCChHHHHHH---HhCCHHHHHHHhcCCCCC-----------------CchhHHH-HHHcCCHHHHHHHHhCCcCCC
Q psy4451 4 LLFQGVSALQTAI---IKNDVMMVKYLLSLPSIK-----------------VRDGALH-AIQCDEINILKLILDWQKCHK 62 (256)
Q Consensus 4 ~d~~G~taLh~A~---~~~~~~~v~~Ll~~~~~~-----------------~g~t~L~-A~~~g~~~~v~~Ll~~~~~~~ 62 (256)
.|.+|+||||+|+ ..|+.+++++|++. +++ .|.|||| |+..|+.+++++|+++|++.+
T Consensus 42 ~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~ 120 (260)
T 3jxi_A 42 EPSTGKTCLPKALLNLSAGRNDTIPILLDI-AEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH 120 (260)
T ss_dssp CTTTCCCHHHHHHTSCBTTBCTHHHHHHHH-HHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred ccCCCCcHHHHHHHHhhcCCHHHHHHHHHh-cccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcC
Confidence 3578999999999 77999999999997 321 3789999 999999999999999977655
Q ss_pred CCcc---ccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcccc
Q psy4451 63 PESE---FKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLE---RGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 63 ~~~~---~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~---~ga~i~~~~~~~~~~~~ 117 (256)
.... ....+.+..+..|.||||+|+..|+.+++++|++ .|++++..+..+.++..
T Consensus 121 ~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh 181 (260)
T 3jxi_A 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLH 181 (260)
T ss_dssp CCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred ccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHH
Confidence 3321 1122333444789999999999999999999999 99999998888888776
No 74
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.68 E-value=3.5e-16 Score=128.53 Aligned_cols=99 Identities=19% Similarity=0.153 Sum_probs=69.7
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||.|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++|++ .+.
T Consensus 5 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----------~~~ 72 (237)
T 3b7b_A 5 KMEHQNKRSPLHAAAEAGHVDICHMLVQA-GANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-----------VDP 72 (237)
T ss_dssp CCSSCCSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----------CCC
T ss_pred ccccCCCCCHHHHHHHcCcHHHHHHHHHc-CCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-----------CCC
Confidence 35788999999999999999999999998 5554 779999 9999999999999998554 334
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERG-HCIPYPHLPT 112 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~g-a~i~~~~~~~ 112 (256)
.+..|.||||.|+..|+.+++++|++.| ++++.+...+
T Consensus 73 ~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g 111 (237)
T 3b7b_A 73 KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGG 111 (237)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCTTCCCTTS
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcccCCCCC
Confidence 4444445555555555555555555444 3444433333
No 75
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.68 E-value=1.1e-16 Score=143.45 Aligned_cols=102 Identities=23% Similarity=0.196 Sum_probs=77.9
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|..|+||||.|+..|+.++|++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+.+
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-----------g~~~~~~ 76 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR-GASPNVSNVKVETPLHMAARAGHTEVAKYLLQN-----------KAKVNAK 76 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT-TCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHH-----------TCCSSCC
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhC-----------CCCCCCC
Confidence 4678899999999999999999999998 6654 679999 9999999999999998 5556666
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccc
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCV 116 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~ 116 (256)
+..|.||||.|+..|+.+++++|+++|++++.....+.++.
T Consensus 77 ~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L 117 (437)
T 1n11_A 77 AKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPL 117 (437)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred CCCCCCHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHH
Confidence 67777777777777777777777777777776665555543
No 76
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.68 E-value=6.9e-17 Score=135.99 Aligned_cols=114 Identities=23% Similarity=0.231 Sum_probs=92.8
Q ss_pred ccCCCCChHHHHHHHh---CCHHHHHHHhcCCCCC-----------------CchhHHH-HHHcCCHHHHHHHHhCCcCC
Q psy4451 3 YLLFQGVSALQTAIIK---NDVMMVKYLLSLPSIK-----------------VRDGALH-AIQCDEINILKLILDWQKCH 61 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~---~~~~~v~~Ll~~~~~~-----------------~g~t~L~-A~~~g~~~~v~~Ll~~~~~~ 61 (256)
..|.+|+||||+|+.. |+.+++++|+++ +++ .|.|||| |+..|+.+++++|+++|++.
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~-ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~ 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDV-ARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHH-HHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHh-hccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence 3588999999999987 999999999997 321 3889999 99999999999999997765
Q ss_pred CCCcc---ccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcccc
Q psy4451 62 KPESE---FKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLE---RGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 62 ~~~~~---~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~---~ga~i~~~~~~~~~~~~ 117 (256)
+.... ....+.+..+..|.||||.|+..|+.+++++|++ .|++++..+..+.++..
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh 189 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLH 189 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHH
Confidence 43221 1112233444589999999999999999999999 99999988888887766
No 77
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.68 E-value=1.1e-16 Score=136.02 Aligned_cols=101 Identities=22% Similarity=0.223 Sum_probs=91.2
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFP 77 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 77 (256)
+..|.||||.||..|+.++++.|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+..+.
T Consensus 37 ~~~~~t~l~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~~~~~ 104 (299)
T 1s70_B 37 KFDDGAVFLAACSSGDTEEVLRLLER-GADINYANVDGLTALHQACIDDNVDMVKFLVEN-----------GANINQPDN 104 (299)
T ss_dssp EECHHHHHHHHHHHTCHHHHHHHHHH-CCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCCT
T ss_pred ccCCccHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHC-----------CCCCCCCCC
Confidence 45678999999999999999999998 5654 789999 9999999999999999 667778888
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 78 KCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 78 ~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.|.||||.|+..|+.+++++|+++|++++..+..+.++..
T Consensus 105 ~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 144 (299)
T 1s70_B 105 EGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLD 144 (299)
T ss_dssp TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHH
Confidence 9999999999999999999999999999988777777655
No 78
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.67 E-value=3.5e-16 Score=132.98 Aligned_cols=96 Identities=23% Similarity=0.265 Sum_probs=80.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
+..|..|+||||.|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 53 ~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~~ 120 (285)
T 3d9h_A 53 MGDAVSDWSPMHEAAIHGHQLSLRNLISQ-GWAVNIITADHVSPLHEACLGGHLSCVKILLKH-----------GAQVNG 120 (285)
T ss_dssp CSSSCCSCCHHHHHHHTTCHHHHHHHHHT-TCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCSSC
T ss_pred cCCCccCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHC-----------CCCCCC
Confidence 34678899999999999999999999998 6655 789999 9999999999999998 556666
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPH 109 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~ 109 (256)
.+..|.||||.|+..|+.+++++|++.|++++...
T Consensus 121 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~ 155 (285)
T 3d9h_A 121 VTADWHTPLFNACVSGSWDCVNLLLQHGASVQPES 155 (285)
T ss_dssp CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC
T ss_pred CCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC
Confidence 77778888888888888888888888888776543
No 79
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.67 E-value=1.2e-16 Score=146.28 Aligned_cols=91 Identities=19% Similarity=0.100 Sum_probs=82.0
Q ss_pred CCCCChHHHHHHH---hCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 5 LFQGVSALQTAII---KNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 5 d~~G~taLh~A~~---~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
|..|+||||+||. +|+.+++++|+++ |+++ |+|||| |+..|+.+++++|+++ |++.+.
T Consensus 168 ~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-ga~vn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~-----------ga~~~~ 235 (497)
T 3lvq_E 168 QAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-----------RALVGT 235 (497)
T ss_dssp CCSCBCHHHHHHHTCCTTTHHHHHHHHHH-SCCTTCCCSSSCCHHHHHTTTTCHHHHHHHHHT-----------CCCCSC
T ss_pred ccccchHHHHHHHhcccccHHHHHHHHHc-CCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 7889999999977 9999999999998 6665 889999 9999999999999999 777888
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPY 107 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~ 107 (256)
+|..|.||||+|+..|+.+++++|+++|++++.
T Consensus 236 ~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 236 VNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 999999999999999999999999999999884
No 80
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.67 E-value=4.6e-16 Score=132.24 Aligned_cols=115 Identities=14% Similarity=0.081 Sum_probs=80.8
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCcc---------
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-----RDGALH-AIQCDEINILKLILDWQKCHKPESE--------- 66 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~--------- 66 (256)
...|.+|+||||+|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++|++.+....
T Consensus 119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A 197 (285)
T 3d9h_A 119 NGVTADWHTPLFNACVSGSWDCVNLLLQH-GASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLA 197 (285)
T ss_dssp SCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHH
T ss_pred CCCCCCCCCHHHHHHHcCHHHHHHHHHHC-CCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHH
Confidence 35678888899999988888888888887 5543 678888 8888888888888888655432100
Q ss_pred -------------ccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 67 -------------FKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 67 -------------~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
..|.+.+ .+..|.||||+|+..|+.+++++|+++|++++..+..+.++.++
T Consensus 198 ~~~~~~~~v~~Ll~~ga~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~ 261 (285)
T 3d9h_A 198 CENQQRACVKKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVEL 261 (285)
T ss_dssp HHTTCHHHHHHHHHTTCCTT-CCBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGG
T ss_pred HHcCcHHHHHHHHHCCCCCC-CCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence 1244444 25566777777777777777777777777777666666666653
No 81
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.66 E-value=6.3e-16 Score=133.95 Aligned_cols=43 Identities=23% Similarity=0.182 Sum_probs=35.7
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCccc
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLE-RGHCIPYPHLPTCQCV 116 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~-~ga~i~~~~~~~~~~~ 116 (256)
..+..|.||||.|+..|+.+++++|++ .|++++..+..+.++.
T Consensus 163 ~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l 206 (337)
T 4g8k_A 163 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNAL 206 (337)
T ss_dssp -CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHH
T ss_pred cccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHH
Confidence 446679999999999999999999995 6999998877666543
No 82
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.66 E-value=4.1e-16 Score=130.72 Aligned_cols=103 Identities=29% Similarity=0.242 Sum_probs=71.6
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCC----HHHHHHHHhCCcCCCCCccccCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDE----INILKLILDWQKCHKPESEFKGHCN 72 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~----~~~v~~Ll~~~~~~~~~~~~~~~~~ 72 (256)
.|..|.||||.|+.+|+.+++++|+++.++++ |.|||| |+..++ .+++++|+++ |.+.
T Consensus 144 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~-----------g~~~ 212 (285)
T 1wdy_A 144 LRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDH-----------GADV 212 (285)
T ss_dssp TTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHT-----------TCCS
T ss_pred hccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHc-----------CCCC
Confidence 46778888888888888888888887634433 678887 888887 7888888887 4445
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcccc
Q psy4451 73 SNDFPKCITPLMLAAQLGRLEIVALLLE-RGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 73 ~~~~~~g~TpL~lAa~~g~~eiv~~Ll~-~ga~i~~~~~~~~~~~~ 117 (256)
+.++..|.||||.|+..|+.+++++|++ .|++++..+..+.++..
T Consensus 213 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~ 258 (285)
T 1wdy_A 213 NVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALL 258 (285)
T ss_dssp SCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHH
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHH
Confidence 5555666666666666666666666666 56666665555555543
No 83
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.66 E-value=2.6e-16 Score=133.30 Aligned_cols=88 Identities=30% Similarity=0.215 Sum_probs=81.0
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHh-CCcCCCCCccccCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILD-WQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~-~~~~~~~~~~~~~~~~~~ 74 (256)
..|..|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|++ + |++.+.
T Consensus 178 ~~~~~g~tpLh~A~~~g~~~~v~~Ll~~-gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~-----------gad~~~ 245 (276)
T 4hbd_A 178 KASQAGQTALMLAVSHGRVDVVKALLAC-EADVNVQDDDGSTALMCACEHGHKEIAGLLLAVP-----------SCDISL 245 (276)
T ss_dssp CCTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTST-----------TCCTTC
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHhC-CCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcC-----------CCCCcC
Confidence 3577899999999999999999999999 6665 889999 999999999999999 6 778888
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERG 102 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~g 102 (256)
++..|.||||+|+..|+.+++++|++++
T Consensus 246 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 246 TDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred cCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9999999999999999999999999864
No 84
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.66 E-value=8.6e-16 Score=125.72 Aligned_cols=101 Identities=25% Similarity=0.277 Sum_probs=58.3
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
|.+|.||||.|+..|+.+++++|+++ +.++ |.|||| |+..|+.++++.|+++ |.+.+..+
T Consensus 39 ~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~ 106 (240)
T 3eu9_A 39 DKENVTLLHWAAINNRIDLVKYYISK-GAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKY-----------GADPSLID 106 (240)
T ss_dssp CTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCC
T ss_pred CCCCCCHHHHHHHhCCHHHHHHHHHc-CCcchhhcCCcCCChhHHHHHcCCHHHHHHHHHc-----------CCCCcccC
Confidence 44444455555554444554444444 2211 334444 4444555555555444 55556666
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
..|.||||.|+..|+.+++++|+++|++++.....+.++..
T Consensus 107 ~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~ 147 (240)
T 3eu9_A 107 GEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLM 147 (240)
T ss_dssp TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHH
Confidence 77777777777777777777777777777766665555543
No 85
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.66 E-value=6.9e-16 Score=126.77 Aligned_cols=90 Identities=17% Similarity=0.138 Sum_probs=64.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhc----CCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLS----LPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGH 70 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~----~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~ 70 (256)
..+|.+|+||||.|+.+|+.++++.|++ . +.++ |.|||| |+..|+.+++++|+++|++
T Consensus 3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~---------- 71 (241)
T 1k1a_A 3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQG-GRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS---------- 71 (241)
T ss_dssp ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC----------
T ss_pred cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhc-CCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC----------
Confidence 4579999999999999999999999987 3 4433 789999 9999999999999998544
Q ss_pred CCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCC
Q psy4451 71 CNSNDFPKCITPLMLAAQLGRLEIVALLLERGH 103 (256)
Q Consensus 71 ~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga 103 (256)
.+..+..|.||||.|+..|+.+++++|++.|+
T Consensus 72 -~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~ 103 (241)
T 1k1a_A 72 -PMALDRHGQTAAHLACEHRSPTCLRALLDSAA 103 (241)
T ss_dssp -TTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred -ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 44444555555555555555555555555554
No 86
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.66 E-value=5.3e-16 Score=119.48 Aligned_cols=100 Identities=21% Similarity=0.222 Sum_probs=87.9
Q ss_pred CCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHHHHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCC
Q psy4451 7 QGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALHAIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCI 80 (256)
Q Consensus 7 ~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~ 80 (256)
+|.||||.|+..|+.++++.|+++.+.++ |.||||.+..|+.++++.|+++ |.+.+.++..|.
T Consensus 1 r~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~~~~~~~~~v~~Ll~~-----------g~~~~~~~~~g~ 69 (156)
T 1bd8_A 1 RAGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQ-----------GASPNVQDTSGT 69 (156)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHT-----------TCCTTCCCTTSC
T ss_pred CcchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHHHHcCCHHHHHHHHHC-----------CCCCCCcCCCCC
Confidence 36799999999999999999998742232 8899987889999999999999 667778889999
Q ss_pred cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 81 TPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 81 TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
||||.|+..|+.+++++|+++|++++.++..+.++..
T Consensus 70 t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~ 106 (156)
T 1bd8_A 70 SPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIH 106 (156)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHH
T ss_pred CHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHH
Confidence 9999999999999999999999999988877777655
No 87
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.65 E-value=4.5e-16 Score=134.90 Aligned_cols=89 Identities=22% Similarity=0.229 Sum_probs=59.2
Q ss_pred ccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCC
Q psy4451 3 YLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSND 75 (256)
Q Consensus 3 ~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~ 75 (256)
..|.+|+||||.|+..|+.++++.|++..++++ |.|||| |+..|+.+++++|+++|++ .+
T Consensus 234 ~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd-----------~n-- 300 (337)
T 4g8k_A 234 VRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS-----------TD-- 300 (337)
T ss_dssp CCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCS-----------ST--
T ss_pred CcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----------CC--
Confidence 456667777777777777777777776544443 667777 7777777777777777433 22
Q ss_pred CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCC
Q psy4451 76 FPKCITPLMLAAQLGRLEIVALLLERGHCIPY 107 (256)
Q Consensus 76 ~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~ 107 (256)
..||||.|+..|+.+++++|+++||+++.
T Consensus 301 ---~~~~L~~A~~~~~~~iv~~Ll~~GA~~d~ 329 (337)
T 4g8k_A 301 ---CGDLVMTARRNYDHSLVKVLLSHGAKEDF 329 (337)
T ss_dssp ---TCCHHHHHHHTTCHHHHHHHHHTTCCC--
T ss_pred ---CCCHHHHHHHcCCHHHHHHHHHCcCCCCC
Confidence 23577777777777777777777777663
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.65 E-value=9.2e-17 Score=131.26 Aligned_cols=98 Identities=19% Similarity=0.110 Sum_probs=77.0
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||+|+.+|+.+++++|+++.++++ |+|||| |+..|+.+++++|+++ |++.+.
T Consensus 100 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-----------ga~~~~ 168 (222)
T 3ehr_A 100 NGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK-----------GARTDL 168 (222)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHHHHTCHHHHHHHHHH-----------TCCSCC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCcc
Confidence 4578999999999999999999999999745544 889999 9999999999999999 777788
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHL 110 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~ 110 (256)
++..|.|||++|+..|+.++++.|++.|++......
T Consensus 169 ~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~ 204 (222)
T 3ehr_A 169 RNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNA 204 (222)
T ss_dssp CCTTSCCHHHHCCSHHHHHHHC--------------
T ss_pred ccCCCCCHHHHhcchhHHHHHHHHhccchhhhccch
Confidence 899999999999999999999999999998775543
No 89
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.65 E-value=4.2e-17 Score=137.94 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=73.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |++.+.
T Consensus 146 n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~-gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~-----------Gad~~~ 213 (269)
T 4b93_B 146 NKKDLSGNTPLIYACSGGHHELVALLLQH-GASINASNNKGNTALHEAVIEKHVFVVELLLLH-----------GASVQV 213 (269)
T ss_dssp CCCCTTCCCHHHHHHHTTCGGGHHHHHHT-TCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHT-----------TCCSCC
T ss_pred CCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCCCccccCCCcHHHHHHHcCCHHHHHHHHHC-----------CCCCCC
Confidence 45788999999999999999999999998 6665 789999 9999999999999998 777888
Q ss_pred CCCCCCcHHHHHHHcCc-HHHHHHHHHCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGR-LEIVALLLERGHCIP 106 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~-~eiv~~Ll~~ga~i~ 106 (256)
+|..|.||||+|+++++ .|+++.|.+.+++++
T Consensus 214 ~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~~ 246 (269)
T 4b93_B 214 LNKRQRTAVDCAEQNSKIMELLQVVPSCVASLD 246 (269)
T ss_dssp CCTTSCCSGGGSCTTCHHHHHTTC---------
T ss_pred cCCCCCCHHHHHHhCCcHHHHHHHHHHhchhhh
Confidence 99999999999998876 355555555555543
No 90
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.65 E-value=6.9e-16 Score=133.32 Aligned_cols=102 Identities=22% Similarity=0.147 Sum_probs=92.5
Q ss_pred cCCCCChHHHHHHHh---CCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 4 LLFQGVSALQTAIIK---NDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 4 ~d~~G~taLh~A~~~---~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
.+..|.||||.|+.. ++.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+
T Consensus 207 ~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~n 274 (351)
T 3utm_A 207 QPQSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAERAHNDVMEVLHKH-----------GAKMN 274 (351)
T ss_dssp CTTTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTT
T ss_pred CCCCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHC-----------CCCCC
Confidence 467899999999999 558999999998 6655 789999 9999999999999999 77788
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
..+..|.||||+|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 275 ~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~ 318 (351)
T 3utm_A 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQ 318 (351)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhh
Confidence 88999999999999999999999999999999998888887765
No 91
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.64 E-value=2.2e-16 Score=130.75 Aligned_cols=101 Identities=18% Similarity=0.060 Sum_probs=65.1
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPK 78 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~ 78 (256)
+..|+||||.|+..++.+.++.|+++ |+++ +.|||| |+..|+.++++.|+++ |.+.+..+..
T Consensus 2 ~~~g~t~L~~a~~~~~~~~~~~ll~~-g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~-----------g~~~~~~d~~ 69 (239)
T 1ycs_B 2 EITGQVSLPPGKRTNLRKTGSERIAH-GMRVKFNPLPLALLLDSSLEGEFDLVQRIIYE-----------VDDPSLPNDE 69 (239)
T ss_dssp ------------------------------------CHHHHHHHHHHTCHHHHHHHTST-----------TSSCCCCCTT
T ss_pred CccccccCchhhhhhhHHHHHHHhcc-CCCcccCchhhHHHHHHHHcCCHHHHHHHHHc-----------CCCCCCcCCC
Confidence 45799999999999999999999999 6655 689999 9999999999999998 6677888999
Q ss_pred CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 79 CITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 79 g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 70 g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~ 108 (239)
T 1ycs_B 70 GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLH 108 (239)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHH
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHH
Confidence 999999999999999999999999999988888877754
No 92
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.64 E-value=3e-16 Score=137.37 Aligned_cols=93 Identities=13% Similarity=0.090 Sum_probs=84.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCC-----C------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIK-----V------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKG 69 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~-----~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~ 69 (256)
...|..|+||||+|+.+|+.+++++|+++ +++ + |+|||| |+..|+.+++++|+++ |
T Consensus 167 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------g 234 (364)
T 3ljn_A 167 TAKDKADETPLMRAMEFRNREALDLMMDT-VPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEM-----------G 234 (364)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTT-----------T
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHhc-ccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHc-----------C
Confidence 46788999999999999999999999987 444 3 889999 9999999999999999 7
Q ss_pred CCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCC
Q psy4451 70 HCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIP 106 (256)
Q Consensus 70 ~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~ 106 (256)
++.+..+..|.||||+|+..|+.+++++|+++|++++
T Consensus 235 ad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~ 271 (364)
T 3ljn_A 235 IDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFL 271 (364)
T ss_dssp CCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHH
T ss_pred CCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchh
Confidence 7778889999999999999999999999999998764
No 93
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.64 E-value=1.4e-15 Score=127.48 Aligned_cols=92 Identities=22% Similarity=0.214 Sum_probs=59.0
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFP 77 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~ 77 (256)
|..|+||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+..+.
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~~~~~~ 103 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRH-GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSK-----------GADVNECDF 103 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCBCT
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCccCc
Confidence 45566666666666666666666665 4433 456666 6666666666666666 445555666
Q ss_pred CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC
Q psy4451 78 KCITPLMLAAQLGRLEIVALLLERGHCIPYP 108 (256)
Q Consensus 78 ~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~ 108 (256)
.|.||||.|+..|+.+++++|+++|++++..
T Consensus 104 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~ 134 (285)
T 1wdy_A 104 YGFTAFMEAAVYGKVKALKFLYKRGANVNLR 134 (285)
T ss_dssp TCCBHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred ccCCHHHHHHHhCCHHHHHHHHHhCCCcccc
Confidence 6777777777777777777777777766644
No 94
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.63 E-value=3.6e-16 Score=132.99 Aligned_cols=100 Identities=13% Similarity=0.127 Sum_probs=68.3
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------c-hhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------R-DGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g-~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|..|+||||+|+..|+.+++++|+++ |+++ | .|||| |+..|+.+++++|+++|++....
T Consensus 89 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--------- 158 (285)
T 3kea_A 89 SQFDDKGNTALYYAVDSGNMQTVKLFVKK-NWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--------- 158 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC---------
T ss_pred CCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc---------
Confidence 45688899999999999999999999988 6655 5 68998 99999999999999886543210
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQ 114 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~ 114 (256)
..|.||||.|+..|+.+++++|+++|++++..+..+.+
T Consensus 159 ---~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t 196 (285)
T 3kea_A 159 ---AILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFI 196 (285)
T ss_dssp ---STHHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCC
T ss_pred ---cCCccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCC
Confidence 13445555555555555555555555555544444333
No 95
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.63 E-value=9.2e-17 Score=121.41 Aligned_cols=91 Identities=20% Similarity=0.225 Sum_probs=77.9
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|..|+||||+|+..|+.+++++|+++ ++++ |.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 37 ~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-----------ga~~~~ 104 (137)
T 3c5r_A 37 NVKDHAGWTPLHEACNHGHLKVVELLLQH-KALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY-----------GASRNA 104 (137)
T ss_dssp CCCCTTSCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTC
T ss_pred CcCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 45788999999999999999999999998 6654 779999 9999999999999999 777788
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
++..|.||+++|+..+..+++++|.+.+.+
T Consensus 105 ~~~~g~tpl~~A~~~~~~~~l~~l~~~~~s 134 (137)
T 3c5r_A 105 VNIFGLRPVDYTDDESMKSLLLLPEKNESS 134 (137)
T ss_dssp CCTTSCCGGGGCCCHHHHHHHSCC------
T ss_pred CCCCCCCHHHHHhhccHHHHHhhccccccC
Confidence 899999999999999999999888776654
No 96
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.63 E-value=4.4e-16 Score=137.34 Aligned_cols=116 Identities=25% Similarity=0.257 Sum_probs=83.8
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCC----CCC----CchhHHH-HHHcC---CHHHHHHHHhCCcCCCCC-----
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLP----SIK----VRDGALH-AIQCD---EINILKLILDWQKCHKPE----- 64 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~----~~~----~g~t~L~-A~~~g---~~~~v~~Ll~~~~~~~~~----- 64 (256)
...|..|+||||+|+.+|+.+++++|++++ ..+ .|.|||| |+..+ +.+++++|+++|++.+..
T Consensus 193 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~ 272 (373)
T 2fo1_E 193 TIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 272 (373)
T ss_dssp CCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGT
T ss_pred cccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCccccccccc
Confidence 345677777777777777777777777762 111 1667777 77766 677777777777654320
Q ss_pred ----------c----------------cccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 65 ----------S----------------EFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 65 ----------~----------------~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
. ...+.+.+..+..|.||||+|+..|+.+++++|+++|++++..+..+.++.+
T Consensus 273 ~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~ 351 (373)
T 2fo1_E 273 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQ 351 (373)
T ss_dssp SSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHH
T ss_pred CcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccCCCCCCCCHHH
Confidence 0 0124777888888999999999999999999999999998888777777665
No 97
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.63 E-value=2.3e-16 Score=135.61 Aligned_cols=89 Identities=19% Similarity=0.110 Sum_probs=82.5
Q ss_pred cCCCCChHHHHHHHh---CCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 4 LLFQGVSALQTAIIK---NDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 4 ~d~~G~taLh~A~~~---~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
.|.+|+||||+|+.. ++.+++++|+++ |+++ |+|||| |+..|+.+++++|+++ |++.+
T Consensus 186 ~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-----------gad~~ 253 (301)
T 2b0o_E 186 AQAPEELVLHLAVKVANQASLPLVDFIIQN-GGHLDAKAADGNTALHYAALYNQPDCLKLLLKG-----------RALVG 253 (301)
T ss_dssp SCSCEECHHHHHHHTCCTTTHHHHHHHHHH-SSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCCS
T ss_pred cCCCCccHHHHHHHhcccCcHHHHHHHHhc-CCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCC
Confidence 578999999999997 899999999998 6654 889999 9999999999999999 77778
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
.+|..|.||||+|+..|+.+++++|+++|++
T Consensus 254 ~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~ 284 (301)
T 2b0o_E 254 TVNEAGETALDIARKKHHKECEELLEQAQAG 284 (301)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC
Confidence 8899999999999999999999999999886
No 98
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.62 E-value=3.9e-16 Score=115.82 Aligned_cols=81 Identities=17% Similarity=0.153 Sum_probs=70.4
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
...|.+|+||||+|+..|+.+++++|+++ ++++ |+|||| |+..|+.+++++|+++ |.+.+.
T Consensus 34 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~-----------ga~~~~ 101 (123)
T 3aaa_C 34 NRTLEGGRKPLHYAADCGQLEILEFLLLK-GADINAPDKHHITPLLSAVYEGHVSCVKLLLSK-----------GADKTV 101 (123)
T ss_dssp TSCCTTSSCHHHHHHHTTCHHHHHHHHTT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTTC
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCC
Confidence 45788999999999999999999999998 6654 789999 9999999999999999 677788
Q ss_pred CCCCCCcHHHHHHHcCcHHH
Q psy4451 75 DFPKCITPLMLAAQLGRLEI 94 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~ei 94 (256)
++..|.||+|+|+..+..++
T Consensus 102 ~~~~g~t~l~~A~~~~~~~l 121 (123)
T 3aaa_C 102 KGPDGLTAFEATDNQAIKAL 121 (123)
T ss_dssp CCTTSCCHHHHCCCHHHHHH
T ss_pred cCCCCCCHHHHhCCHHHHHH
Confidence 89999999999954444443
No 99
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.62 E-value=9.6e-16 Score=135.19 Aligned_cols=91 Identities=19% Similarity=0.140 Sum_probs=81.1
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.|..|+||||+|+.+|+.+++++|++++++++ |.|||| |+..|+.+++++|+++ |++.+..+
T Consensus 275 ~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~-----------gad~~~~d 343 (373)
T 2fo1_E 275 EKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQ-----------GASVEAVD 343 (373)
T ss_dssp SSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHT-----------TCCSSCCC
T ss_pred ccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCccCCC
Confidence 57789999999999999999999998744554 789999 9999999999999999 77788889
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCC
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCI 105 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i 105 (256)
..|.|||++|+..|+.+++++|+++|++-
T Consensus 344 ~~g~t~l~~A~~~g~~~iv~~Ll~~~a~~ 372 (373)
T 2fo1_E 344 ATDHTARQLAQANNHHNIVDIFDRCRPER 372 (373)
T ss_dssp SSSCCHHHHHHHTTCHHHHHHHHTTC---
T ss_pred CCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99999999999999999999999998863
No 100
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.61 E-value=1.6e-15 Score=120.40 Aligned_cols=88 Identities=18% Similarity=0.135 Sum_probs=74.1
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|.+|+||||+|+..|+.+++++|+++ |+++ |+|||| |+..|+.+++++|+++ |.+.+
T Consensus 70 ~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-----------ga~~~ 137 (183)
T 3deo_A 70 DAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-----------GADIE 137 (183)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSSCCHHHHHHHTTCHHHHHHHHHH-----------TCCTT
T ss_pred CCcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHhcCcHHHHHHHHHc-----------CCCCc
Confidence 46789999999999999999999999998 5544 779999 9999999999999999 66677
Q ss_pred CCCCCCCcHHHHHHHc----------------CcHHHHHHHHHC
Q psy4451 74 NDFPKCITPLMLAAQL----------------GRLEIVALLLER 101 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~----------------g~~eiv~~Ll~~ 101 (256)
.++..|.||||+|++. |+.+++++|.++
T Consensus 138 ~~d~~g~tpl~~A~~~~~~~~~~~~l~~a~~~~~~~i~~~L~~~ 181 (183)
T 3deo_A 138 VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQ 181 (183)
T ss_dssp CCCTTSCCHHHHHHHHHHTCCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCCCHHHHHHHhccCcccccHHHHHHHcCHHHHHHHHHHh
Confidence 7788888888888765 556677766543
No 101
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.61 E-value=1.9e-15 Score=125.67 Aligned_cols=92 Identities=17% Similarity=0.103 Sum_probs=77.4
Q ss_pred cccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC-------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 2 FYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV-------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~-------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
...|.+|+||||+|+.+|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |.+.+
T Consensus 71 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-ga~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-----------ga~~~ 138 (244)
T 3ui2_A 71 DAVDENGRTALLFVAGLGSDKCVRLLAEA-GADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL-----------GADIE 138 (244)
T ss_dssp TCBCTTSCBHHHHHHHHTCHHHHHHHHHT-TCCTTCCCSSSCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTT
T ss_pred CCcCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHHC-----------CCCCC
Confidence 46789999999999999999999999998 5554 779999 9999999999999999 55555
Q ss_pred CCCCCCCcHHHHHH----------------HcCcHHHHHHHHHCCCCC
Q psy4451 74 NDFPKCITPLMLAA----------------QLGRLEIVALLLERGHCI 105 (256)
Q Consensus 74 ~~~~~g~TpL~lAa----------------~~g~~eiv~~Ll~~ga~i 105 (256)
.++..|.||||+|+ ..|+.+++++|++.+.+.
T Consensus 139 ~~d~~g~t~l~~A~~~~~~~~~~~~l~~a~~~g~~~iv~~L~~~~~~~ 186 (244)
T 3ui2_A 139 VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEY 186 (244)
T ss_dssp CCCTTCCCHHHHHHHHHTTCCCSSHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred CCCCCCCcHHHHHHHHHhccCCCCHHHHHHHcChHHHHHHHHHhcccc
Confidence 66666666666665 778999999999876543
No 102
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.60 E-value=2.6e-15 Score=132.48 Aligned_cols=99 Identities=17% Similarity=0.112 Sum_probs=64.4
Q ss_pred CCChHHHHHHHh-CCHHHHHHHhcCCCCCC--------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCC
Q psy4451 7 QGVSALQTAIIK-NDVMMVKYLLSLPSIKV--------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDF 76 (256)
Q Consensus 7 ~G~taLh~A~~~-~~~~~v~~Ll~~~~~~~--------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~ 76 (256)
.+.|+||.|+.. ++.++++.|+++ |+++ |.|||| |+..|+.+++++|+++ |++.+..+
T Consensus 198 ~~~t~L~~Aa~~~g~~~~v~~LL~~-Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-----------Gadvn~~d 265 (368)
T 3jue_A 198 HPGALLFRASGHPPSLPTMADALAH-GADVNWVNGGQDNATPLIQATAANSLLACEFLLQN-----------GANVNQAD 265 (368)
T ss_dssp CHHHHHHHHTSSSCCHHHHHHHHHT-TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-----------TCCTTCCC
T ss_pred CCCcHHHHHHHccCCHHHHHHHHHc-CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHc-----------CCCCCCCC
Confidence 445667777766 677777777666 3332 456666 6667777777777766 55555666
Q ss_pred CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 77 PKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 77 ~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
..|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 266 ~~G~TpLh~A~~~g~~~~v~~LL~~Gad~~~~d~~G~TpL~ 306 (368)
T 3jue_A 266 SAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLT 306 (368)
T ss_dssp TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred CCCCCHHHHHHHcCcHHHHHHHHHCcCCCCCcCCCCCCHHH
Confidence 66677777777777777777777777766666666555544
No 103
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.60 E-value=1.5e-15 Score=121.50 Aligned_cols=92 Identities=11% Similarity=0.012 Sum_probs=79.7
Q ss_pred CcccCCCCChHHHHHHHhCC------HHHHHHHhcCCCCCC------ch-hHHH-HHHcC-----CHHHHHHHHh-CCcC
Q psy4451 1 MFYLLFQGVSALQTAIIKND------VMMVKYLLSLPSIKV------RD-GALH-AIQCD-----EINILKLILD-WQKC 60 (256)
Q Consensus 1 ~~~~d~~G~taLh~A~~~~~------~~~v~~Ll~~~~~~~------g~-t~L~-A~~~g-----~~~~v~~Ll~-~~~~ 60 (256)
+...|.+|+||||+|+..++ .+++++|+++ |+++ |. |||| |+..+ +.+++++|++ +
T Consensus 68 vn~~d~~g~TpLh~a~~~~~~~~~~~~~iv~~Ll~~-Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~--- 143 (186)
T 3t8k_A 68 IKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEK-GADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQS--- 143 (186)
T ss_dssp SSCCCTTCCCTHHHHHHHCTTCHHHHHHHHHHHHHT-TCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTST---
T ss_pred CCCCCCCCCcHHHHHHHcCCcchhhHHHHHHHHHHC-CCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhc---
Confidence 35678999999999999997 6889999999 7776 77 9999 88844 4579999999 7
Q ss_pred CCCCccccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 61 HKPESEFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 61 ~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
|++.+.++..|.||||+|++.|+.+++++|.+...+
T Consensus 144 --------gad~~~~d~~G~TpL~~A~~~~~~~~v~~L~~~~~~ 179 (186)
T 3t8k_A 144 --------GLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKK 179 (186)
T ss_dssp --------TCCTTCCCTTSCCHHHHHHTTTCHHHHHHHHHHHHH
T ss_pred --------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHHHHH
Confidence 788889999999999999999999999999876443
No 104
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.59 E-value=5.1e-15 Score=121.08 Aligned_cols=105 Identities=19% Similarity=0.158 Sum_probs=90.0
Q ss_pred CcccCCCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 1 MFYLLFQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 1 ~~~~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
|.-.|.+|.||||.|+..|+.++++.|++. ++++ |.|||| |+..|+.+++++|+++++ +.+
T Consensus 2 ~~~~d~~~~~~l~~A~~~g~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-----------~~~ 69 (240)
T 3eu9_A 2 MTHIDDYSTWDIVKATQYGIYERCRELVEA-GYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGA-----------IVD 69 (240)
T ss_dssp CCCCSCGGGCCHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-----------CTT
T ss_pred ccccccccchHHHHHHHcCChHHHHHHHHc-CCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCC-----------cch
Confidence 345789999999999999999999999998 5654 779999 999999999999999944 333
Q ss_pred C-CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 74 N-DFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 74 ~-~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
. .+..|.||||.|+..|+.+++++|++.|++++.....+.++..
T Consensus 70 ~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~ 114 (240)
T 3eu9_A 70 QLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIH 114 (240)
T ss_dssp CCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred hhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHH
Confidence 2 3345899999999999999999999999999988777766654
No 105
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.58 E-value=3.1e-15 Score=131.99 Aligned_cols=90 Identities=22% Similarity=0.249 Sum_probs=82.2
Q ss_pred ccC--CCCChHHHHHHHhCCHHHHHHHhcCCCCCC------chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCC
Q psy4451 3 YLL--FQGVSALQTAIIKNDVMMVKYLLSLPSIKV------RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNS 73 (256)
Q Consensus 3 ~~d--~~G~taLh~A~~~~~~~~v~~Ll~~~~~~~------g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 73 (256)
..| .+|.||||+|+..|+.+++++|+++ |+++ |.|||| |+..|+.+++++|+++ |++.+
T Consensus 228 ~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-Gadvn~~d~~G~TpLh~A~~~g~~~~v~~LL~~-----------Gad~~ 295 (368)
T 3jue_A 228 WVNGGQDNATPLIQATAANSLLACEFLLQN-GANVNQADSAGRGPLHHATILGHTGLACLFLKR-----------GADLG 295 (368)
T ss_dssp CCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-----------TCCTT
T ss_pred ccccccCCCCHHHHHHHCCCHHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHC-----------cCCCC
Confidence 345 8899999999999999999999999 7766 789999 9999999999999999 77788
Q ss_pred CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy4451 74 NDFPKCITPLMLAAQLGRLEIVALLLERGHC 104 (256)
Q Consensus 74 ~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~ 104 (256)
..+..|.||||+|+..|+.+++++|++.|..
T Consensus 296 ~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~ 326 (368)
T 3jue_A 296 ARDSEGRDPLTIAMETANADIVTLLRLAKMR 326 (368)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHHHC-
T ss_pred CcCCCCCCHHHHHHHCCCHHHHHHHHHcCCC
Confidence 8999999999999999999999999988753
No 106
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.55 E-value=1.4e-14 Score=122.94 Aligned_cols=98 Identities=16% Similarity=0.186 Sum_probs=88.2
Q ss_pred ChHHHHHHHhCCHHHHHHHhcCCCCC------------CchhHHH-HHHc---CCHHHHHHHHhCCcCCCCCccccCCCC
Q psy4451 9 VSALQTAIIKNDVMMVKYLLSLPSIK------------VRDGALH-AIQC---DEINILKLILDWQKCHKPESEFKGHCN 72 (256)
Q Consensus 9 ~taLh~A~~~~~~~~v~~Ll~~~~~~------------~g~t~L~-A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 72 (256)
.++|+.|+..|+.+.++.+++. |.+ .|.|||| |+.. |+.+++++|+++ |++.
T Consensus 131 l~~l~~a~~~~d~~~~~~ll~~-g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~-----------ga~i 198 (278)
T 1dcq_A 131 LHSLCEAVKTRDIFGLLQAYAD-GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQN-----------SGNL 198 (278)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHT-TCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHH-----------CSCT
T ss_pred hhhhhhHhhhcccHHHHHHHHh-hcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHC-----------CCCc
Confidence 3689999999999999999988 444 2789999 9998 899999999999 7778
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCccccc
Q psy4451 73 SNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQV 118 (256)
Q Consensus 73 ~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~~ 118 (256)
+.++..|.||||+|+..|+.+++++|+++|++++..+..+.++...
T Consensus 199 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~ 244 (278)
T 1dcq_A 199 DKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244 (278)
T ss_dssp TCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHH
Confidence 8889999999999999999999999999999999998888887663
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.54 E-value=1.7e-14 Score=123.82 Aligned_cols=98 Identities=18% Similarity=0.177 Sum_probs=87.5
Q ss_pred CChHHHHHHHhCCHHHHHHHhcCCCCCC------------chhHHH-HHHc---CCHHHHHHHHhCCcCCCCCccccCCC
Q psy4451 8 GVSALQTAIIKNDVMMVKYLLSLPSIKV------------RDGALH-AIQC---DEINILKLILDWQKCHKPESEFKGHC 71 (256)
Q Consensus 8 G~taLh~A~~~~~~~~v~~Ll~~~~~~~------------g~t~L~-A~~~---g~~~~v~~Ll~~~~~~~~~~~~~~~~ 71 (256)
+.++|+.|+.+|+.+.++.|++. ++++ |.|||| |+.. |+.+++++|+++ |.+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~-g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~-----------gad 218 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-----------GGH 218 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT-TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHH-----------SSC
T ss_pred hHHHHhhhhhccCHHHHHHHHhc-CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhc-----------CCC
Confidence 34679999999999999999988 4442 679999 9886 899999999999 777
Q ss_pred CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 72 NSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 72 ~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
.+..+..|.||||+|+..|+.+++++|+++|++++..+..+.++..
T Consensus 219 vn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~ 264 (301)
T 2b0o_E 219 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 264 (301)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHH
T ss_pred CCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 7888999999999999999999999999999999998888888776
No 108
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.54 E-value=1.5e-14 Score=132.37 Aligned_cols=97 Identities=19% Similarity=0.174 Sum_probs=87.9
Q ss_pred ChHHHHHHHhCCHHHHHHHhcCCCCCC------------chhHHH-HHH---cCCHHHHHHHHhCCcCCCCCccccCCCC
Q psy4451 9 VSALQTAIIKNDVMMVKYLLSLPSIKV------------RDGALH-AIQ---CDEINILKLILDWQKCHKPESEFKGHCN 72 (256)
Q Consensus 9 ~taLh~A~~~~~~~~v~~Ll~~~~~~~------------g~t~L~-A~~---~g~~~~v~~Ll~~~~~~~~~~~~~~~~~ 72 (256)
.++||.|+.+|+.+.++.|+++ |+++ |.|||| |+. .|+.+++++|+++ |++.
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~-g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~-----------ga~v 200 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN-GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN-----------GGHL 200 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT-TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHH-----------SCCT
T ss_pred HHHHHHHHhccCHHHHHHHHhh-cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHc-----------CCCC
Confidence 4689999999999999999998 5542 789999 955 9999999999999 7778
Q ss_pred CCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcccc
Q psy4451 73 SNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQCVQ 117 (256)
Q Consensus 73 ~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~~~~ 117 (256)
+.++..|.||||+||..|+.+++++|+++|++++..+..+.++..
T Consensus 201 n~~d~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~tpl~ 245 (497)
T 3lvq_E 201 DAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALD 245 (497)
T ss_dssp TCCCSSSCCHHHHHTTTTCHHHHHHHHHTCCCCSCCCTTCCCHHH
T ss_pred CccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHH
Confidence 888999999999999999999999999999999999888888765
No 109
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.49 E-value=2.7e-15 Score=132.78 Aligned_cols=92 Identities=15% Similarity=0.095 Sum_probs=58.0
Q ss_pred CCCCChHHHHHHHhCCHHHHHHHhcCCCC------CC---chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 5 LFQGVSALQTAIIKNDVMMVKYLLSLPSI------KV---RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 5 d~~G~taLh~A~~~~~~~~v~~Ll~~~~~------~~---g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
+.+++||||.|+.+|+.++|++|+++ +. ++ |+|||| |+..|+.+++++|+++|++... .+.+.
T Consensus 89 g~~~~T~Lh~Aa~~G~~e~v~~Ll~~-ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~------~~i~~ 161 (376)
T 2aja_A 89 GIKSEVICFVAAITGCSSALDTLCLL-LTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIM------AMIQA 161 (376)
T ss_dssp TCCHHHHHHHHHHHCCHHHHHHHTTC---CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHH------HHHSH
T ss_pred CCCcCCHHHHHHHcCCHHHHHHHHHc-CCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccc------cccCC
Confidence 44566788888888888888888877 33 22 667787 8888888888888877542100 01111
Q ss_pred CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCC
Q psy4451 75 DFPKCITPLMLAAQLGRLEIVALLLERGHCIP 106 (256)
Q Consensus 75 ~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~ 106 (256)
. + .||||.||..|+.|++++|+++|++++
T Consensus 162 ~--~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~ 190 (376)
T 2aja_A 162 E--N-YHAFRLAAENGHLHVLNRLCELAPTEA 190 (376)
T ss_dssp H--H-HHHHHHHHHTTCHHHHHHHHHSCGGGH
T ss_pred C--C-CCHHHHHHHCCCHHHHHHHHHcCCccc
Confidence 1 1 567777777777777777777776644
No 110
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.46 E-value=1.1e-13 Score=97.35 Aligned_cols=71 Identities=31% Similarity=0.359 Sum_probs=64.9
Q ss_pred chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy4451 36 RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQ 114 (256)
Q Consensus 36 g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~ 114 (256)
|+|||| |+..|+.+++++|+++ |.+.+.++..|.||||.|+..|+.+++++|+++|++++..+..+.+
T Consensus 2 g~t~L~~A~~~~~~~~v~~Ll~~-----------g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 70 (93)
T 1n0q_A 2 GRTPLHLAARNGHLEVVKLLLEA-----------GADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRT 70 (93)
T ss_dssp -CCHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred CCcHHHHHHHcCCHHHHHHHHHc-----------CCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCC
Confidence 679999 9999999999999999 7777888999999999999999999999999999999988887777
Q ss_pred ccc
Q psy4451 115 CVQ 117 (256)
Q Consensus 115 ~~~ 117 (256)
+..
T Consensus 71 ~l~ 73 (93)
T 1n0q_A 71 PLH 73 (93)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 111
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.45 E-value=2.4e-14 Score=126.63 Aligned_cols=89 Identities=13% Similarity=0.168 Sum_probs=78.3
Q ss_pred cCCCCChHHHHHHHhCCHHHHHHHhcCCCCC-----C---chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCC
Q psy4451 4 LLFQGVSALQTAIIKNDVMMVKYLLSLPSIK-----V---RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSN 74 (256)
Q Consensus 4 ~d~~G~taLh~A~~~~~~~~v~~Ll~~~~~~-----~---g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~ 74 (256)
+|..|.||||+|+.+|+.|+|++|+++ |++ + +.|||| |+..|+.+++++|+++ |.+.+.
T Consensus 124 ~~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~-----------ga~~~~ 191 (376)
T 2aja_A 124 IQAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCEL-----------APTEAT 191 (376)
T ss_dssp -CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHS-----------CGGGHH
T ss_pred hccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHc-----------CCccch
Confidence 455688999999999999999999999 664 2 468999 9999999999999999 666555
Q ss_pred --CCCCCCcHHHHHH-HcCcHHHHHHHHHCCCC
Q psy4451 75 --DFPKCITPLMLAA-QLGRLEIVALLLERGHC 104 (256)
Q Consensus 75 --~~~~g~TpL~lAa-~~g~~eiv~~Ll~~ga~ 104 (256)
.+..|.||||.|| ..|+.|++++|++.|++
T Consensus 192 ~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga~ 224 (376)
T 2aja_A 192 AMIQAENYYAFRWAAVGRGHHNVINFLLDCPVM 224 (376)
T ss_dssp HHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHH
T ss_pred hccCCCCCCHHHHHHHHCCCHHHHHHHHhCCCc
Confidence 7778999999999 99999999999998864
No 112
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.31 E-value=4.1e-12 Score=92.29 Aligned_cols=72 Identities=25% Similarity=0.269 Sum_probs=65.8
Q ss_pred chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy4451 36 RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTCQ 114 (256)
Q Consensus 36 g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~~ 114 (256)
|+++|| |+..|+.++++.|+++ |.+.+.++..|.||||.|+..|+.+++++|+++|++++..+..+.+
T Consensus 24 g~t~L~~A~~~g~~~~v~~Ll~~-----------g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t 92 (110)
T 2zgd_A 24 LGKKLLEAARAGQDDEVRILMAN-----------GADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKT 92 (110)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-----------TCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCC
T ss_pred cchHHHHHHHcCCHHHHHHHHHc-----------CCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCc
Confidence 789999 9999999999999999 6677788899999999999999999999999999999988888777
Q ss_pred cccc
Q psy4451 115 CVQV 118 (256)
Q Consensus 115 ~~~~ 118 (256)
+...
T Consensus 93 pl~~ 96 (110)
T 2zgd_A 93 AFDI 96 (110)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7653
No 113
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.31 E-value=9.2e-13 Score=114.05 Aligned_cols=78 Identities=22% Similarity=0.248 Sum_probs=66.5
Q ss_pred cccCCCCChHHHHHHH----hCCHHHHHHHhcCC----------------------------------------------
Q psy4451 2 FYLLFQGVSALQTAII----KNDVMMVKYLLSLP---------------------------------------------- 31 (256)
Q Consensus 2 ~~~d~~G~taLh~A~~----~~~~~~v~~Ll~~~---------------------------------------------- 31 (256)
...|.+|+||||+|+. .|+.+++++|++.+
T Consensus 195 ~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~ 274 (327)
T 1sw6_A 195 ILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN 274 (327)
T ss_dssp GEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH
T ss_pred cCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHh
Confidence 4578999999999999 89999999998651
Q ss_pred CCCC----chhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHHHHHHcC
Q psy4451 32 SIKV----RDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLMLAAQLG 90 (256)
Q Consensus 32 ~~~~----g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g 90 (256)
+++. |+|||| |+..|+.+++++|+++ |++.+.++..|.||||+|++.|
T Consensus 275 ~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~-----------Gad~~~~d~~G~TpL~~A~~~g 327 (327)
T 1sw6_A 275 MLNAQDSNGDTCLNIAARLGNISIVDALLDY-----------GADPFIANKSGLRPVDFGAGLE 327 (327)
T ss_dssp TTTCCCTTSCCHHHHHHHHCCHHHHHHHHHT-----------TCCTTCCCTTSCCGGGGTCC--
T ss_pred CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCcccCCCCCCHHHHHHhcC
Confidence 1222 889999 9999999999999999 7778889999999999998765
No 114
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.22 E-value=1.6e-11 Score=89.42 Aligned_cols=72 Identities=28% Similarity=0.232 Sum_probs=65.0
Q ss_pred CchhHHH-HHHcCCHHHHHHHHhCCcCCCCCccccCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy4451 35 VRDGALH-AIQCDEINILKLILDWQKCHKPESEFKGHCNSNDFPKCITPLMLAAQLGRLEIVALLLERGHCIPYPHLPTC 113 (256)
Q Consensus 35 ~g~t~L~-A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ga~i~~~~~~~~ 113 (256)
.|.|||| |+..|+.++++.|+++ |.+.+..+..|.||||.|+..|+.+++++|++.|++++..+..+.
T Consensus 8 ~g~t~L~~A~~~~~~~~~~~Ll~~-----------g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~ 76 (115)
T 2l6b_A 8 DGNTPLHNAAKNGHAEEVKKLLSK-----------GADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGN 76 (115)
T ss_dssp SSCCHHHHHHHHTCHHHHHHHTTT-----------TCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHc-----------CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCC
Confidence 3789999 9999999999999998 666778888999999999999999999999999999998877777
Q ss_pred cccc
Q psy4451 114 QCVQ 117 (256)
Q Consensus 114 ~~~~ 117 (256)
++..
T Consensus 77 tpl~ 80 (115)
T 2l6b_A 77 TPEH 80 (115)
T ss_dssp CTTH
T ss_pred CHHH
Confidence 7665
No 115
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=96.68 E-value=0.00054 Score=57.65 Aligned_cols=78 Identities=14% Similarity=0.335 Sum_probs=58.0
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Q psy4451 142 KRFFSVRWNIYEVFKCSLFVLTFMFWVAAYVSVRLYDQQDLERKYWHFLDPTLVAESLFAVATVMSFCNLLFLCQLSYDL 221 (256)
Q Consensus 142 ~~~~~~~wn~~d~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~rll~~~~~~~~~ 221 (256)
.+|+++.||++|++.+..+++... ..+.+.-++-.+|++++.+.++.+
T Consensus 87 ~~y~~~~wn~~Dl~~v~~~~i~~~--------------------------------~~~~~lr~~RilR~lrl~~~~~~l 134 (285)
T 3rvy_A 87 ISFFKDPWSLFDFFVVAISLVPTS--------------------------------SGFEILRVLRVLRLFRLVTAVPQM 134 (285)
T ss_dssp GGGGGCHHHHHHHHHHHHHHSCSS--------------------------------SSCTHHHHHGGGGGGHHHHSSTTH
T ss_pred HHHHcCChHHhHHHHHHHHHHccc--------------------------------chHHHHHHHHHHHHHHHHHHHHHH
Confidence 668899999999876554432210 001223445566778888889999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4451 222 GPMQVSVGKMTEDIMKFSVLFGIIMLAFTV 251 (256)
Q Consensus 222 Gp~~~~l~~m~~di~~F~~i~~v~~~af~~ 251 (256)
..+..++.+...++..++++++++++.||+
T Consensus 135 ~~l~~~l~~~~~~l~~~~~~~~~~~~~fa~ 164 (285)
T 3rvy_A 135 RKIVSALISVIPGMLSVIALMTLFFYIFAI 164 (285)
T ss_dssp HHHHHHHHHHGGGGHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988885
No 116
>4dxw_A Navrh, ION transport protein; tetrameric, voltage-gated sodium channel, sodium selective, gated ION channel; HET: BNG PX4; 3.05A {Alpha proteobacterium HIMB114}
Probab=96.51 E-value=0.0012 Score=53.62 Aligned_cols=81 Identities=19% Similarity=0.323 Sum_probs=54.0
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHhhhhccc
Q psy4451 141 SKRFFSVRWNIYEVFKCSLFVLTFMFWVAAYVSVRLYDQQDLERKYWHFLDPTLVAESLFAVATVMSFCNLLFLCQLSYD 220 (256)
Q Consensus 141 ~~~~~~~~wn~~d~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~rll~~~~~~~~ 220 (256)
.++|+++.||++|++.+...++..... ....+.-++-.+|.+++.+.++.
T Consensus 69 ~~~y~~~~wni~D~~~v~~~~i~~~~~------------------------------~~~~~lr~~RilR~lrl~~~~~~ 118 (229)
T 4dxw_A 69 KADFFKSGWNIFDTVIVAISLIPIPNN------------------------------SSFLVLRLLRIFRVLRLISVIPE 118 (229)
T ss_dssp ------CHHHHHHHHHHHHTTCC--------------------------------------CCTTHHHHHHTTHHHHCHH
T ss_pred hhHHhcCCcHHHHHHHHHHHHhhcCcc------------------------------HHHHHHHHHHHHHHHHHHHHhHH
Confidence 567999999999987665443221000 00111123556788888889999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4451 221 LGPMQVSVGKMTEDIMKFSVLFGIIMLAFTV 251 (256)
Q Consensus 221 ~Gp~~~~l~~m~~di~~F~~i~~v~~~af~~ 251 (256)
+..+..++.+..+++..+..+.+++++.||+
T Consensus 119 l~~l~~~l~~s~~~l~~~~~~l~~~~~ifa~ 149 (229)
T 4dxw_A 119 LKQIIEAILESVRRVFFVSLLLFIILYIYAT 149 (229)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999987
No 117
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=93.67 E-value=0.091 Score=47.85 Aligned_cols=25 Identities=20% Similarity=0.360 Sum_probs=20.2
Q ss_pred chhhhhhhhhHHHHHHHHHHHHHHH
Q psy4451 141 SKRFFSVRWNIYEVFKCSLFVLTFM 165 (256)
Q Consensus 141 ~~~~~~~~wn~~d~~~~~l~~~~~~ 165 (256)
...|+++.||++|++.++.+.+.+.
T Consensus 266 k~~Y~ks~wniiDli~iip~~i~l~ 290 (514)
T 2r9r_B 266 KAGFFTNIMNIIDIVAIIPYYVTIF 290 (514)
T ss_dssp SSSSTTSHHHHHHHHTTHHHHHHHH
T ss_pred HHHHHhchhHHHHHHHHHHHHHHHH
Confidence 4589999999999998877765544
No 118
>3beh_A MLL3241 protein; transmembrane protein, membrane protein; HET: LDA; 3.10A {Mesorhizobium loti} PDB: 2zd9_A*
Probab=82.35 E-value=0.69 Score=39.58 Aligned_cols=45 Identities=16% Similarity=0.236 Sum_probs=26.2
Q ss_pred HHHHHhhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Q psy4451 209 CNLLFLCQLSYDLGPMQVSVGKMTEDIMKFSVLFGIIMLAFTVGK 253 (256)
Q Consensus 209 ~rll~~~~~~~~~Gp~~~~l~~m~~di~~F~~i~~v~~~af~~~~ 253 (256)
+|++++.|..+.+--+.-.+.+....+..++.+++++++.||+.+
T Consensus 103 ~R~lrl~r~~~~~~~l~~~l~~~~~~l~~~~~~~~~~~~~~a~~~ 147 (355)
T 3beh_A 103 VWLLKPLRDSTFFPVLGRVLANEARNLIGVTTLFGVVLFAVALAA 147 (355)
T ss_dssp GGGSHHHHTCSSHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344444554444444444444445667777777777777777654
No 119
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=69.29 E-value=25 Score=31.67 Aligned_cols=27 Identities=22% Similarity=0.288 Sum_probs=22.5
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy4451 145 FSVRWNIYEVFKCSLFVLTFMFWVAAY 171 (256)
Q Consensus 145 ~~~~wn~~d~~~~~l~~~~~~l~~~~~ 171 (256)
+.+.|.++|.+...+|.+=+++|+.+.
T Consensus 237 ~~~~l~~ie~i~~~iFtiE~ilR~~~~ 263 (514)
T 2r9r_B 237 FTDPFFIVETLCIIWFSFEFLVRFFAC 263 (514)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 456788999999999999999997764
No 120
>1orq_C Potassium channel; voltage-dependent, KVAP, FAB complex, MEM protein; 3.20A {Aeropyrum pernix} SCOP: f.14.1.1 PDB: 2a0l_A
Probab=58.07 E-value=36 Score=26.44 Aligned_cols=24 Identities=8% Similarity=0.196 Sum_probs=14.0
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHH
Q psy4451 146 SVRWNIYEVFKCSLFVLTFMFWVA 169 (256)
Q Consensus 146 ~~~wn~~d~~~~~l~~~~~~l~~~ 169 (256)
.+.|.++|.+....|.+-+.+|+.
T Consensus 38 ~~~l~~~d~~~~~iF~~e~~lr~~ 61 (223)
T 1orq_C 38 LVRLYLVDLILVIILWADYAYRAY 61 (223)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHc
Confidence 345556666666666666665554
No 121
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=56.12 E-value=15 Score=20.46 Aligned_cols=21 Identities=10% Similarity=0.338 Sum_probs=15.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHH
Q psy4451 145 FSVRWNIYEVFKCSLFVLTFM 165 (256)
Q Consensus 145 ~~~~wn~~d~~~~~l~~~~~~ 165 (256)
..+.|||+|+.--+-|+-.++
T Consensus 5 Wa~lWnWFdItkWlwyIKI~i 25 (42)
T 3g9r_A 5 WASLWNWFNITNWLWYIKIEE 25 (42)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHH
Confidence 357899999877666775444
No 122
>1ors_C Potassium channel; voltage-dependent, voltage sensor, KVAP, FAB complex, membrane protein; 1.90A {Aeropyrum pernix} SCOP: f.14.1.1
Probab=43.86 E-value=84 Score=22.30 Aligned_cols=27 Identities=7% Similarity=0.209 Sum_probs=20.6
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy4451 145 FSVRWNIYEVFKCSLFVLTFMFWVAAY 171 (256)
Q Consensus 145 ~~~~wn~~d~~~~~l~~~~~~l~~~~~ 171 (256)
..+.+.+.|++....|.+=+.+|+.+.
T Consensus 35 ~~~~l~~~d~~~~~iFt~E~~lRl~~~ 61 (132)
T 1ors_C 35 YLVRLYLVDLILVIILWADYAYRAYKS 61 (132)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 345677888888888888888887663
No 123
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=38.53 E-value=71 Score=27.93 Aligned_cols=66 Identities=15% Similarity=0.074 Sum_probs=48.0
Q ss_pred chhHHHH---HHcCCHHHHHHHHhCCcCCCCCccc---cCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHHC
Q psy4451 36 RDGALHA---IQCDEINILKLILDWQKCHKPESEF---KGHCNSNDFPKCITPLMLAAQLGRLEIVALLLER 101 (256)
Q Consensus 36 g~t~L~A---~~~g~~~~v~~Ll~~~~~~~~~~~~---~~~~~~~~~~~g~TpL~lAa~~g~~eiv~~Ll~~ 101 (256)
.+..|.| +-.|+.+.|+.-+.+|.+.+..... .--+....+.-|.|-+|+|.+..+.|++..|+..
T Consensus 20 dw~~l~ac~gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 20 DWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred cHHHHHHhHHHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 3455544 4589999999999988887654321 1112223477899999999999999999999973
No 124
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=30.43 E-value=36 Score=18.92 Aligned_cols=17 Identities=29% Similarity=0.212 Sum_probs=14.8
Q ss_pred HHHHHHcCcHHHHHHHH
Q psy4451 83 LMLAAQLGRLEIVALLL 99 (256)
Q Consensus 83 L~lAa~~g~~eiv~~Ll 99 (256)
+..||..|++|.++.|-
T Consensus 17 iyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHTTSCHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHH
Confidence 57899999999999884
No 125
>3rvy_A ION transport protein; tetrameric ION channel, voltage-gated sodium-selective ION C membrane, metal transport; HET: PX4; 2.70A {Arcobacter butzleri} PDB: 3rvz_A* 4ekw_A* 3rw0_A*
Probab=27.51 E-value=82 Score=25.44 Aligned_cols=97 Identities=15% Similarity=0.247 Sum_probs=46.5
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccCCCChHHHHHHHHHHHHHHHHHHHHHh---hhhccc
Q psy4451 144 FFSVRWNIYEVFKCSLFVLTFMFWVAAYVSVRLYDQQDLERKYWHFLDPTLVAESLFAVATVMSFCNLLFL---CQLSYD 220 (256)
Q Consensus 144 ~~~~~wn~~d~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~rll~~---~~~~~~ 220 (256)
.......++|.+....|.+=..+|+.+.- ...-+..|+-.|...+.-.+......+..+|+++. ++.-+.
T Consensus 58 ~~~~~l~~~e~~~~~iF~~E~~lrl~~~~-------~~y~~~~wn~~Dl~~v~~~~i~~~~~~~~lr~~RilR~lrl~~~ 130 (285)
T 3rvy_A 58 SFGVYTTLFNQIVITIFTIEIILRIYVHR-------ISFFKDPWSLFDFFVVAISLVPTSSGFEILRVLRVLRLFRLVTA 130 (285)
T ss_dssp HSHHHHHHHHHHHHHHHHHHHHHHHHTTG-------GGGGGCHHHHHHHHHHHHHHSCSSSSCTHHHHHGGGGGGHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------HHHHcCChHHhHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHH
Confidence 34456677888888888888888865532 12334445544433221111111111234455444 444445
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4451 221 LGPMQVSVGKMTEDIMKFSVLFGIIML 247 (256)
Q Consensus 221 ~Gp~~~~l~~m~~di~~F~~i~~v~~~ 247 (256)
..-+...+..+.+-+-....+.+++++
T Consensus 131 ~~~l~~l~~~l~~~~~~l~~~~~~~~~ 157 (285)
T 3rvy_A 131 VPQMRKIVSALISVIPGMLSVIALMTL 157 (285)
T ss_dssp STTHHHHHHHHHHHGGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555544444444444444444443333
No 126
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=23.80 E-value=1.3e+02 Score=26.33 Aligned_cols=43 Identities=19% Similarity=0.304 Sum_probs=32.8
Q ss_pred HHHhCCHHHHHHHhcCCC-------------------CCCchhHHH-HHHcCCHHHHHHHHhC
Q psy4451 15 AIIKNDVMMVKYLLSLPS-------------------IKVRDGALH-AIQCDEINILKLILDW 57 (256)
Q Consensus 15 A~~~~~~~~v~~Ll~~~~-------------------~~~g~t~L~-A~~~g~~~~v~~Ll~~ 57 (256)
.+..|+.+.|+.-+..+| .++|.|..| |++..+.+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhhhhHHHHhhhc
Confidence 455788888887776632 123889999 9999999999999863
Done!