BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4453
(187 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9QX29|TRPC5_MOUSE Short transient receptor potential channel 5 OS=Mus musculus
GN=Trpc5 PE=1 SV=2
Length = 975
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKY---PLL 75
S +E F + YEEL + K F DL+D R + E+EI+L R + KY L
Sbjct: 231 SKVENEFKAEYEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKL 290
Query: 76 MVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLC 135
VA+ Y QKEFVA PN QQ+L +W + W + K L ++ FL P ++I L
Sbjct: 291 KVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLI 350
Query: 136 LQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
+S+ G F P I ASY FLF+L
Sbjct: 351 SPRSNLGLFIKKPFIKFICHTASYLTFLFML 381
>sp|Q9UL62|TRPC5_HUMAN Short transient receptor potential channel 5 OS=Homo sapiens
GN=TRPC5 PE=1 SV=1
Length = 973
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKY---PLL 75
S +E F + YEEL + K F DL+D R + E+EI+L R + KY L
Sbjct: 231 SKVENEFKAEYEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKL 290
Query: 76 MVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLC 135
VA+ Y QKEFVA PN QQ+L +W + W + K L ++ FL P ++I L
Sbjct: 291 KVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLI 350
Query: 136 LQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
+S+ G F P I ASY FLF+L
Sbjct: 351 SPRSNLGLFIKKPFIKFICHTASYLTFLFML 381
>sp|O62852|TRPC5_RABIT Short transient receptor potential channel 5 OS=Oryctolagus
cuniculus GN=TRPC5 PE=2 SV=1
Length = 974
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/151 (37%), Positives = 76/151 (50%), Gaps = 3/151 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKY---PLL 75
S +E F + YEEL + K F DL+D R + E+EI+L R + KY L
Sbjct: 231 SKVENEFKAEYEELSQQCKLFAKDLLDQARSSRELEIILNHRDDHSEELDPQKYHDLAKL 290
Query: 76 MVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLC 135
VA+ Y QKEFVA PN QQ+L +W + W + K L ++ FL P ++I L
Sbjct: 291 KVAIKYHQKEFVAQPNCQQLLATLWYDGFPGWRRKHWVVKLLTCMTIGFLFPMLSIAYLI 350
Query: 136 LQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
+S+ G F P I ASY FLF+L
Sbjct: 351 SPRSNLGLFIKKPFIKFICHTASYLTFLFML 381
>sp|P79100|TRPC4_BOVIN Short transient receptor potential channel 4 OS=Bos taurus GN=TRPC4
PE=2 SV=2
Length = 979
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYPL--LM 76
S +E F S YEEL + KQF DL+D R + E+EI+L R +L++ + L L
Sbjct: 231 SKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLLEEQSGNDLARLK 290
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ YRQKEFVA PN QQ+L W ++ W + K + L P ++ L
Sbjct: 291 LAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIVGLLFPVFSVCYLIA 350
Query: 137 QKSSYGRFYSIPVNIMINAMASY 159
KS G F P I ASY
Sbjct: 351 PKSPLGLFIRKPFIKFICHTASY 373
>sp|Q9QUQ5|TRPC4_MOUSE Short transient receptor potential channel 4 OS=Mus musculus
GN=Trpc4 PE=1 SV=1
Length = 974
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYPL--LM 76
S +E F S YEEL + KQF DL+D R + E+EI+L R +L++ + L L
Sbjct: 231 SKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLK 290
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ YRQKEFVA PN QQ+L W ++ W + K + L P ++ L
Sbjct: 291 LAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIA 350
Query: 137 QKSSYGRFYSIPVNIMINAMASY 159
KS G F P I ASY
Sbjct: 351 PKSPLGLFIRKPFIKFICHTASY 373
>sp|O35119|TRPC4_RAT Short transient receptor potential channel 4 OS=Rattus norvegicus
GN=Trpc4 PE=1 SV=2
Length = 977
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYPL--LM 76
S +E F S YEEL + KQF DL+D R + E+EI+L R +L++ + L L
Sbjct: 231 SKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLK 290
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ YRQKEFVA PN QQ+L W ++ W + K + L P ++ L
Sbjct: 291 LAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIA 350
Query: 137 QKSSYGRFYSIPVNIMINAMASY 159
KS G F P I ASY
Sbjct: 351 PKSPLGLFIRKPFIKFICHTASY 373
>sp|Q9UBN4|TRPC4_HUMAN Short transient receptor potential channel 4 OS=Homo sapiens
GN=TRPC4 PE=1 SV=1
Length = 977
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 71/143 (49%), Gaps = 2/143 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYPL--LM 76
S +E F S YEEL + KQF DL+D R + E+EI+L R +L++ + L L
Sbjct: 231 SKVENEFKSEYEELSRQCKQFAKDLLDQTRSSRELEIILNYRDDNSLIEEQSGNDLARLK 290
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ YRQKEFVA PN QQ+L W ++ W + K + L P ++ L
Sbjct: 291 LAIKYRQKEFVAQPNCQQLLASRWYDEFPGWRRRHWAVKMVTCFIIGLLFPVFSVCYLIA 350
Query: 137 QKSSYGRFYSIPVNIMINAMASY 159
KS G F P I ASY
Sbjct: 351 PKSPLGLFIRKPFIKFICHTASY 373
>sp|Q61143|TRPC6_MOUSE Short transient receptor potential channel 6 OS=Mus musculus
GN=Trpc6 PE=1 SV=3
Length = 930
Score = 80.1 bits (196), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/151 (33%), Positives = 75/151 (49%), Gaps = 4/151 (2%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYP---LL 75
++IE F + Y +L + K F V L+D CR+ EVE +L T F P L
Sbjct: 307 ANIEKEFKNDYRKLSMQCKDFVVGLLDLCRNTEEVEAILNGDAETR-QPGDFGRPNLSRL 365
Query: 76 MVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLC 135
+A+ Y K+FVAHPN QQ L IW + + + KFL++L+ LP++ ++ C
Sbjct: 366 KLAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWC 425
Query: 136 LQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
S G+ P + AS+ IFL LL
Sbjct: 426 APCSKMGKILRGPFMKFVAHAASFTIFLGLL 456
>sp|Q9Y210|TRPC6_HUMAN Short transient receptor potential channel 6 OS=Homo sapiens
GN=TRPC6 PE=1 SV=1
Length = 931
Score = 75.5 bits (184), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 75/150 (50%), Gaps = 2/150 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT--ALMKSRFKYPLLM 76
++IE F + Y++L + K F V L+D CR+ EVE +L T + R L
Sbjct: 308 ANIEKEFKNDYKKLSMQCKDFVVGLLDLCRNTEEVEAILNGDVETLQSGDHGRPNLSRLK 367
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ Y K+FVAHPN QQ L IW + + + KFL++L+ LP++ ++
Sbjct: 368 LAIKYEVKKFVAHPNCQQQLLSIWYENLSGLRQQTMAVKFLVVLAVAIGLPFLALIYWFA 427
Query: 137 QKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
S G+ P + AS+ IFL LL
Sbjct: 428 PCSKMGKIMRGPFMKFVAHAASFTIFLGLL 457
>sp|P48995|TRPC1_HUMAN Short transient receptor potential channel 1 OS=Homo sapiens
GN=TRPC1 PE=1 SV=1
Length = 793
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT------ALMKSRFKYPL 74
+E F + YEEL + K F DL+ R++ E+E++L L++ R
Sbjct: 250 VEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSR 309
Query: 75 LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
L +A+ Y QKEFV+ N QQ L+ +W G + + K + +L+ P +++ L
Sbjct: 310 LKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYL 369
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIF 162
KS +GR P I ASY F
Sbjct: 370 IAPKSQFGRIIHTPFMKFIIHGASYFTF 397
>sp|Q9TUN9|TRPC1_RABIT Short transient receptor potential channel 1 OS=Oryctolagus
cuniculus GN=TRPC1 PE=2 SV=1
Length = 759
Score = 74.3 bits (181), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT------ALMKSRFKYPL 74
+E F + YEEL + K F DL+ R++ E+E++L L++ R
Sbjct: 216 VEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSR 275
Query: 75 LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
L +A+ Y QKEFV+ N QQ L+ +W G + + K + +L+ P +++ L
Sbjct: 276 LKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYL 335
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIF 162
KS +GR P I ASY F
Sbjct: 336 IAPKSQFGRIIHTPFMKFIIHGASYFTF 363
>sp|Q61056|TRPC1_MOUSE Short transient receptor potential channel 1 OS=Mus musculus
GN=Trpc1 PE=1 SV=5
Length = 793
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT------ALMKSRFKYPL 74
+E F + YEEL + K F DL+ R++ E+E++L L++ R
Sbjct: 250 VEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSR 309
Query: 75 LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
L +A+ Y QKEFV+ N QQ L+ +W G + + K + +L+ P +++ L
Sbjct: 310 LKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYL 369
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIF 162
KS +GR P I ASY F
Sbjct: 370 IAPKSQFGRIIHTPFMKFIIHGASYFTF 397
>sp|O18784|TRPC1_BOVIN Short transient receptor potential channel 1 OS=Bos taurus GN=TRPC1
PE=2 SV=1
Length = 793
Score = 74.3 bits (181), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT------ALMKSRFKYPL 74
+E F + YEEL + K F DL+ R++ E+E++L L++ R
Sbjct: 250 VEVEFRNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSNDEPLDKRGLLEERMNLSR 309
Query: 75 LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
L +A+ Y QKEFV+ N QQ L+ +W G + + K + +L+ P +++ L
Sbjct: 310 LKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYL 369
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIF 162
KS +GR P I ASY F
Sbjct: 370 IAPKSQFGRIIHTPFMKFIIHGASYFTF 397
>sp|Q9QX01|TRPC1_RAT Short transient receptor potential channel 1 OS=Rattus norvegicus
GN=Trpc1 PE=1 SV=1
Length = 759
Score = 73.6 bits (179), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 6/148 (4%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGT------ALMKSRFKYPL 74
+E F + YEEL + K F DL+ R++ E+E++L L++ R
Sbjct: 216 VEVEFWNDYEELARQCKMFAKDLLAQARNSRELEVILNHTSSDEPLDKRGLLEERMNLSR 275
Query: 75 LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
L +A+ Y QKEFV+ N QQ L+ +W G + + K + +L+ P +++ L
Sbjct: 276 LKLAIKYNQKEFVSQSNCQQFLNTVWFGQMSGYRRKPTCKKIMTVLTVGIFWPVLSLCYL 335
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIF 162
KS +GR P I ASY F
Sbjct: 336 IAPKSQFGRIIHTPFMKFIIHGASYFTF 363
>sp|Q9R244|TRPC2_MOUSE Short transient receptor potential channel 2 OS=Mus musculus
GN=Trpc2 PE=2 SV=2
Length = 1172
Score = 69.3 bits (168), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 25 FGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLK------------RRKGTALMKSRFKY 72
F Y L + + +L+ CR+ SEV VL G A +
Sbjct: 526 FKPQYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSETEPEAEGLGQAFEEGIPNL 585
Query: 73 PLLMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIV 132
L +A++Y QK+FVAHP QQ+L IW G+ W + +K + +P++ I
Sbjct: 586 ARLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFLCIG 645
Query: 133 TLCLQKSSYGRFYSIPVNIMINAMASYCIFLFLLWHQS 170
KS GR IPV + ASY FL L +S
Sbjct: 646 YWLAPKSQLGRLLKIPVLKFLLHSASYLWFLIFLLGES 683
>sp|Q9HCX4|TRPC7_HUMAN Short transient receptor potential channel 7 OS=Homo sapiens
GN=TRPC7 PE=1 SV=1
Length = 862
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 69/150 (46%), Gaps = 2/150 (1%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMKSRFKYPL--LM 76
++IE F + Y +L + K F V ++D CRD EVE +L + + L +
Sbjct: 253 ANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVNFQVWSDHHRPSLSRIK 312
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ Y K+FVAHPN QQ L +W + + S KFL + LP++ I
Sbjct: 313 LAIKYEVKKFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGVSIGLPFLAIAYWIA 372
Query: 137 QKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
S GR P + S+ IFL LL
Sbjct: 373 PCSKLGRTLRSPFMKFVAHAVSFTIFLGLL 402
>sp|Q9R283|TRPC2_RAT Short transient receptor potential channel 2 OS=Rattus norvegicus
GN=Trpc2 PE=2 SV=2
Length = 1170
Score = 68.9 bits (167), Expect = 2e-11, Method: Composition-based stats.
Identities = 47/158 (29%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 25 FGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLK------------RRKGTALMKSRFKY 72
F Y L + + +L+ CR+ SEV VL G A +
Sbjct: 525 FKPQYIALESLCQDYGFELLGMCRNQSEVTAVLNDLGEDSETEPEAEGLGQAFEEGIPNL 584
Query: 73 PLLMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIV 132
L +A++Y QK+FVAHP QQ+L IW G+ W + +K + +P++ I
Sbjct: 585 ARLRLAVNYNQKQFVAHPICQQVLSSIWCGNLAGWRGSTTIWKLFVAFLIFLTMPFLCIG 644
Query: 133 TLCLQKSSYGRFYSIPVNIMINAMASYCIFLFLLWHQS 170
KS GR IPV + ASY FL L +S
Sbjct: 645 YWLAPKSRLGRLLKIPVLKFLLHSASYLWFLIFLLGES 682
>sp|Q9WVC5|TRPC7_MOUSE Short transient receptor potential channel 7 OS=Mus musculus
GN=Trpc7 PE=2 SV=1
Length = 862
Score = 67.4 bits (163), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 74/164 (45%), Gaps = 2/164 (1%)
Query: 5 MLNMLSLILLRSHTSDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTA 64
+L L L + ++IE F + Y +L + K F V ++D CRD EVE +L
Sbjct: 239 VLTALELSNELARLANIETEFKNDYRKLSMQCKDFVVGVLDLCRDTEEVEAILNGDVNLQ 298
Query: 65 LMKSRFKYPL--LMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSR 122
+ + L + +A+ Y K+FVAHPN QQ L +W + + S KFL +
Sbjct: 299 VWSDHHRPSLSRIKLAIKYEVKKFVAHPNCQQQLLTMWYENLSGLRQQSIAVKFLAVFGV 358
Query: 123 IFLLPWITIVTLCLQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
LP++ I S G+ P + S+ IFL LL
Sbjct: 359 SIGLPFLAIAYWIAPCSKLGQTLRSPFMKFVAHAVSFTIFLGLL 402
>sp|Q9VJJ7|TRPG_DROME Transient receptor potential-gamma protein OS=Drosophila
melanogaster GN=trpgamma PE=1 SV=2
Length = 1128
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 76/159 (47%), Gaps = 2/159 (1%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTALMK--SRFKYPLLMVA 78
+E F + Y+EL + + F L+D R + E+EI+L + + R L +A
Sbjct: 223 LEHEFKNEYQELRKQCQDFATALLDHTRTSHELEILLNHDPTGPVYEHGERMHLNRLKLA 282
Query: 79 MDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCLQK 138
+ RQK+FVAH NVQQ+L IW + + + + + I+ + P ++ +
Sbjct: 283 IKLRQKKFVAHSNVQQLLASIWYEGLPGFRRKNMALQAVDIIRIGIMFPIFSLAYILAPY 342
Query: 139 SSYGRFYSIPVNIMINAMASYCIFLFLLWHQSNQDKNFV 177
SS G+ P I ASY FLFLL S + + F+
Sbjct: 343 SSIGQTMRKPFIKFICHSASYFTFLFLLMLASQRIETFI 381
>sp|P48994|TRPL_DROME Transient-receptor-potential-like protein OS=Drosophila
melanogaster GN=trpl PE=1 SV=2
Length = 1124
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 75/154 (48%), Gaps = 3/154 (1%)
Query: 27 SSYEELLHRTKQFTVDLIDCCRDASEVEIVLK--RRKGTALMKSRFKYPLLMVAMDYRQK 84
S Y +L + ++F VDL+D R ++E+ I+L + + R L+ A+ Y+QK
Sbjct: 250 SEYMDLRRQCQKFAVDLLDQTRTSNELAIILNYDPQMSSYEPGDRMSLTRLVQAISYKQK 309
Query: 85 EFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCLQKSSYGRF 144
+FVAH N+QQ+L IW + + S K + I L P ++ +C G+
Sbjct: 310 KFVAHSNIQQLLSSIWYDGLPGFRRKSIVDKVICIAQVAVLFPLYCLIYMCAPNCRTGQL 369
Query: 145 YSIPVNIMINAMASYCIFLFLLWHQSNQ-DKNFV 177
P + +SY FLF+L S + D +FV
Sbjct: 370 MRKPFMKFLIHASSYLFFLFILILVSQRADDDFV 403
>sp|Q9QZC1|TRPC3_MOUSE Short transient receptor potential channel 3 OS=Mus musculus
GN=Trpc3 PE=2 SV=1
Length = 836
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLK---------RRKGTALMKSR 69
++IE F + Y +L + K F V ++D CRD+ EVE +L R G SR
Sbjct: 237 ANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLERHGHKASLSR 296
Query: 70 FKYPLLMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWI 129
K +A+ Y K+FVAHPN QQ L IW + + + K L++L LP++
Sbjct: 297 VK-----LAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFL 351
Query: 130 TIVTLCLQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
I S G+ P + AS+ IFL LL
Sbjct: 352 AIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLL 388
>sp|Q9JMI9|TRPC3_RAT Short transient receptor potential channel 3 OS=Rattus norvegicus
GN=Trpc3 PE=2 SV=3
Length = 836
Score = 63.5 bits (153), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 73/157 (46%), Gaps = 14/157 (8%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLK---------RRKGTALMKSR 69
++IE F + Y +L + K F V ++D CRD+ EVE +L R G SR
Sbjct: 237 ANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESVEPLERHGHKASLSR 296
Query: 70 FKYPLLMVAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWI 129
K +A+ Y K+FVAHPN QQ L IW + + + K L++L LP++
Sbjct: 297 VK-----LAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFL 351
Query: 130 TIVTLCLQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
I S G+ P + AS+ IFL LL
Sbjct: 352 AIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLL 388
>sp|Q13507|TRPC3_HUMAN Short transient receptor potential channel 3 OS=Homo sapiens
GN=TRPC3 PE=1 SV=3
Length = 836
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 72/152 (47%), Gaps = 4/152 (2%)
Query: 19 SDIEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKR--RKGTALMKSRFKYPLLM 76
++IE F + Y +L + K F V ++D CRD+ EVE +L L R K L
Sbjct: 237 ANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEVEAILNGDLESAEPLEVHRHKASLSR 296
Query: 77 V--AMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTL 134
V A+ Y K+FVAHPN QQ L IW + + + K L++L LP++ I
Sbjct: 297 VKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLREQTIAIKCLVVLVVALGLPFLAIGYW 356
Query: 135 CLQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
S G+ P + AS+ IFL LL
Sbjct: 357 IAPCSRLGKILRSPFMKFVAHAASFIIFLGLL 388
>sp|P19334|TRP_DROME Transient receptor potential protein OS=Drosophila melanogaster
GN=trp PE=1 SV=3
Length = 1275
Score = 59.3 bits (142), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/150 (26%), Positives = 65/150 (43%), Gaps = 4/150 (2%)
Query: 21 IEWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTA----LMKSRFKYPLLM 76
+E F + Y E+ + F L+D R + E+E++L + + R L
Sbjct: 235 MESEFRAEYTEMRQMVQDFGTSLLDHARTSMELEVMLNFNHEPSHDIWCLGQRQTLERLK 294
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLLPWITIVTLCL 136
+A+ Y+QK FVAHPNVQQ+L IW + + + + ++ P ++ +
Sbjct: 295 LAIRYKQKTFVAHPNVQQLLAAIWYDGLPGFRRKQASQQLMDVVKLGCSFPIYSLKYILA 354
Query: 137 QKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
S +F P I SY FL LL
Sbjct: 355 PDSEGAKFMRKPFVKFITHSCSYMFFLMLL 384
>sp|P34586|TRPL_CAEEL Transient-receptor-potential-like protein OS=Caenorhabditis elegans
GN=trp-1 PE=2 SV=3
Length = 1027
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 70/151 (46%), Gaps = 7/151 (4%)
Query: 22 EWIFGSSYEELLHRTKQFTVDLIDCCRDASEVEIVLKRRKGTA-----LMKSRFKYPLLM 76
E F +Y +L + KQ++ DL+ CR + EV +L + + S+ L
Sbjct: 256 EHEFKETYLQLSEQCKQYSCDLLSQCRSSEEVIAILNKDGNVNDDNIDVWASKLSLSRLK 315
Query: 77 VAMDYRQKEFVAHPNVQQMLDCIWIGDWIDWEKYSQPYKFLIILSRIFLL-PWITIVTLC 135
+A+ Y QK FV+HP+ QQ+L IW + I + + S + + + + L P ++ +
Sbjct: 316 LAIKYEQKAFVSHPHCQQLLTSIWY-EGIPYRQRSGTWANFFLYAFLLFLWPIFCLMYIL 374
Query: 136 LQKSSYGRFYSIPVNIMINAMASYCIFLFLL 166
+ KS GR P S+ FL LL
Sbjct: 375 MPKSRLGRLVRSPFMKFFYYSVSFATFLGLL 405
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.330 0.142 0.457
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,167,978
Number of Sequences: 539616
Number of extensions: 2297231
Number of successful extensions: 5895
Number of sequences better than 100.0: 30
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 5837
Number of HSP's gapped (non-prelim): 34
length of query: 187
length of database: 191,569,459
effective HSP length: 111
effective length of query: 76
effective length of database: 131,672,083
effective search space: 10007078308
effective search space used: 10007078308
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 58 (26.9 bits)