Query psy4458
Match_columns 303
No_of_seqs 143 out of 669
Neff 7.8
Searched_HMMs 13730
Date Fri Aug 16 17:36:05 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4458.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/4458hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ufma_ a.4.5.47 (A:) COP9 sig 99.8 7.7E-21 5.6E-25 139.6 7.1 69 197-265 10-78 (84)
2 d1qqea_ a.118.8.1 (A:) Vesicul 95.4 0.31 2.2E-05 40.5 15.7 169 5-177 90-265 (290)
3 d1wi9a_ a.4.5.47 (A:) Hypothet 94.4 0.075 5.5E-06 35.4 6.8 52 212-263 16-67 (72)
4 d1tjca_ a.118.8.1 (A:) Prolyl 93.0 0.14 1E-05 35.6 6.9 70 33-104 6-75 (95)
5 d1sfxa_ a.4.5.50 (A:) Hypothet 92.9 0.52 3.8E-05 33.6 10.2 70 215-284 32-101 (109)
6 d1ub9a_ a.4.5.28 (A:) Hypothet 91.9 0.59 4.3E-05 32.6 9.2 70 215-284 28-98 (100)
7 d1hz4a_ a.118.8.2 (A:) Transcr 91.7 0.63 4.6E-05 37.8 10.6 96 4-103 24-119 (366)
8 d1dpua_ a.4.5.16 (A:) C-termin 91.5 0.11 7.8E-06 34.6 4.2 39 216-254 22-61 (69)
9 d1qqea_ a.118.8.1 (A:) Vesicul 91.0 0.48 3.5E-05 39.2 9.2 98 4-104 49-147 (290)
10 d1z05a1 a.4.5.63 (A:10-80) Tra 90.4 0.34 2.5E-05 31.9 6.1 46 203-248 3-51 (71)
11 d2cfxa1 a.4.5.32 (A:1-63) Tran 90.0 0.41 3E-05 30.8 6.1 35 215-249 17-51 (63)
12 d1p5qa1 a.118.8.1 (A:258-427) 89.4 2.8 0.00021 31.5 12.0 116 25-145 3-127 (170)
13 d1elra_ a.118.8.1 (A:) Hop {Hu 89.3 1.7 0.00012 31.2 10.0 92 5-105 17-109 (128)
14 d1z6ra1 a.4.5.63 (A:12-81) Mlc 88.9 0.4 2.9E-05 31.6 5.5 46 203-248 2-50 (70)
15 d1hxia_ a.118.8.1 (A:) Peroxin 87.5 2.8 0.0002 29.1 10.0 84 3-101 27-110 (112)
16 d2cg4a1 a.4.5.32 (A:4-66) Regu 86.6 0.71 5.2E-05 29.6 5.5 35 215-249 17-51 (63)
17 d2c2la1 a.118.8.1 (A:24-224) S 86.4 2.2 0.00016 32.1 9.5 84 4-103 16-100 (201)
18 d1a17a_ a.118.8.1 (A:) Protein 86.3 3.6 0.00026 30.2 10.5 66 30-104 8-73 (159)
19 d1xnfa_ a.118.8.1 (A:) Lipopro 85.2 4.4 0.00032 31.5 11.2 88 6-104 13-100 (259)
20 d1a17a_ a.118.8.1 (A:) Protein 85.2 2.1 0.00015 31.6 8.6 86 4-104 22-107 (159)
21 d1i1ga1 a.4.5.32 (A:2-61) LprA 84.5 0.7 5.1E-05 29.3 4.6 34 215-248 15-48 (60)
22 d1hh8a_ a.118.8.1 (A:) Neutrop 83.5 3.8 0.00028 31.4 9.8 82 4-103 17-98 (192)
23 d2cyya1 a.4.5.32 (A:5-64) Puta 82.6 0.81 5.9E-05 28.9 4.3 34 215-248 15-48 (60)
24 d1w3ba_ a.118.8.1 (A:) O-GlcNA 82.5 9.1 0.00066 30.7 12.5 85 4-103 181-265 (388)
25 d2fbha1 a.4.5.28 (A:8-144) Tra 81.1 5.3 0.00039 28.7 9.3 44 214-257 40-83 (137)
26 d1elwa_ a.118.8.1 (A:) Hop {Hu 80.3 7.1 0.00052 27.0 10.0 64 31-103 2-65 (117)
27 d1p5qa1 a.118.8.1 (A:258-427) 80.2 5.5 0.0004 29.7 9.4 90 5-103 26-124 (170)
28 d1rz4a1 a.4.5.53 (A:132-216) E 78.8 2 0.00015 29.3 5.5 40 201-240 5-45 (85)
29 d1lj9a_ a.4.5.28 (A:) Transcri 78.4 10 0.00073 27.6 10.2 42 215-256 41-82 (144)
30 d1s3ja_ a.4.5.28 (A:) Putative 77.1 8.4 0.00061 27.8 9.4 43 215-257 47-89 (143)
31 d2etha1 a.4.5.28 (A:1-140) Put 76.7 9.6 0.0007 27.4 9.6 46 215-260 44-89 (140)
32 d1elwa_ a.118.8.1 (A:) Hop {Hu 75.6 10 0.00073 26.1 12.1 86 4-105 15-101 (117)
33 d1hz4a_ a.118.8.2 (A:) Transcr 74.1 18 0.0013 28.3 13.0 102 4-106 63-164 (366)
34 d1fcha_ a.118.8.1 (A:) Peroxin 73.5 10 0.00075 30.3 9.9 86 4-104 31-116 (323)
35 d1lvaa3 a.4.5.35 (A:511-574) C 73.0 5.5 0.0004 25.2 6.3 35 215-249 21-55 (64)
36 d1fcha_ a.118.8.1 (A:) Peroxin 72.9 11 0.00081 30.1 10.0 60 34-102 174-233 (323)
37 d3ctaa1 a.4.5.28 (A:5-89) Ta10 72.8 4.1 0.0003 27.4 5.9 62 217-280 21-82 (85)
38 d2fxaa1 a.4.5.28 (A:6-167) Pro 72.7 6 0.00044 29.8 7.6 50 209-258 47-96 (162)
39 d1w3ba_ a.118.8.1 (A:) O-GlcNA 71.8 21 0.0016 28.3 14.1 157 3-184 214-371 (388)
40 d1jhfa1 a.4.5.2 (A:2-72) LexA 70.8 6.4 0.00046 25.4 6.3 43 217-259 24-67 (71)
41 d1lnwa_ a.4.5.28 (A:) MexR rep 70.4 14 0.001 26.5 9.2 44 214-257 47-90 (141)
42 d1kt1a1 a.118.8.1 (A:254-421) 69.9 18 0.0013 26.5 10.6 91 5-104 28-127 (168)
43 d1p4xa2 a.4.5.28 (A:126-250) S 66.4 6.5 0.00048 28.2 6.2 44 215-258 47-90 (125)
44 d2d1ha1 a.4.5.50 (A:1-109) Hyp 66.3 17 0.0012 24.9 9.5 40 216-255 35-74 (109)
45 d1l0oc_ a.4.13.2 (C:) SigmaF { 65.9 11 0.0008 23.1 6.4 26 213-238 27-52 (57)
46 d1s6la1 a.4.5.79 (A:21-80) Alk 65.9 2 0.00015 27.1 2.6 28 216-243 15-42 (60)
47 d1hxia_ a.118.8.1 (A:) Peroxin 64.9 17 0.0013 24.6 9.4 61 35-104 19-79 (112)
48 d2fbia1 a.4.5.28 (A:5-140) Pro 63.8 21 0.0015 25.2 10.4 44 215-258 42-85 (136)
49 d1kt1a1 a.118.8.1 (A:254-421) 63.8 23 0.0017 25.7 11.5 79 25-103 5-92 (168)
50 d1ylfa1 a.4.5.55 (A:5-142) Hyp 63.4 3.2 0.00023 30.4 4.0 44 214-258 20-63 (138)
51 d1jgsa_ a.4.5.28 (A:) Multiple 63.3 9.4 0.00069 27.5 6.7 44 215-258 46-89 (138)
52 d3deua1 a.4.5.28 (A:2-141) Tra 63.1 13 0.00098 26.4 7.6 46 217-262 46-94 (140)
53 d2c2la1 a.118.8.1 (A:24-224) S 61.9 26 0.0019 25.5 10.4 61 35-104 7-67 (201)
54 d2bv6a1 a.4.5.28 (A:5-140) Tra 61.7 8.7 0.00063 27.6 6.2 44 214-257 45-88 (136)
55 d1mkma1 a.4.5.33 (A:1-75) Tran 59.9 7.5 0.00055 25.2 5.0 35 215-249 18-52 (75)
56 d1nzna_ a.118.8.1 (A:) Mitocho 59.0 15 0.0011 25.7 7.0 54 5-62 49-102 (122)
57 d2hr3a1 a.4.5.28 (A:2-146) Pro 58.8 21 0.0016 25.5 8.1 42 216-257 48-89 (145)
58 d1zyba1 a.4.5.4 (A:148-220) Pr 57.1 6.5 0.00047 25.5 4.2 41 217-261 27-67 (73)
59 d2ev0a1 a.4.5.24 (A:2-62) Mang 55.2 11 0.0008 23.5 4.9 33 216-248 20-52 (61)
60 d1p4xa1 a.4.5.28 (A:1-125) Sta 55.0 19 0.0014 25.4 7.0 42 216-257 49-90 (125)
61 d3e5ua1 a.4.5.4 (A:148-227) Ch 54.7 6.5 0.00047 25.7 3.9 32 217-248 30-61 (80)
62 d1t56a1 a.4.1.9 (A:22-94) Ethr 54.6 7.3 0.00053 24.7 4.1 31 203-233 8-39 (73)
63 d1jt6a1 a.4.1.9 (A:2-72) Multi 54.6 7.2 0.00052 24.7 4.1 35 200-234 3-38 (71)
64 d2frha1 a.4.5.28 (A:102-216) P 54.4 11 0.00079 26.4 5.5 43 215-257 47-89 (115)
65 d3bwga1 a.4.5.6 (A:5-82) Trans 53.9 17 0.0012 23.5 6.0 46 213-260 17-63 (78)
66 d2fbna1 a.118.8.1 (A:22-174) P 53.7 34 0.0025 24.4 11.2 91 5-104 30-130 (153)
67 d1ldda_ a.4.5.34 (A:) Anaphase 53.1 13 0.00095 24.3 5.1 35 215-249 20-65 (74)
68 d2id3a1 a.4.1.9 (A:13-80) Puta 52.9 12 0.00087 23.4 5.0 36 198-233 6-42 (68)
69 d1i5za1 a.4.5.4 (A:138-206) Ca 52.6 9.8 0.00072 24.0 4.5 32 217-248 29-60 (69)
70 d2isya1 a.4.5.24 (A:2-64) Iron 51.8 14 0.001 23.2 5.0 34 215-248 21-54 (63)
71 d1ku9a_ a.4.5.36 (A:) DNA-bind 51.4 37 0.0027 24.1 8.5 46 216-261 40-85 (151)
72 d1ihga1 a.118.8.1 (A:197-365) 50.6 39 0.0029 24.2 8.7 66 30-104 75-140 (169)
73 d1z91a1 a.4.5.28 (A:8-144) Org 50.3 13 0.00098 26.5 5.6 43 215-257 45-87 (137)
74 d2zcwa1 a.4.5.4 (A:118-199) Tr 49.7 11 0.0008 24.6 4.5 34 216-249 28-61 (82)
75 d1nd9a_ a.6.1.6 (A:) N-termina 49.7 6.8 0.0005 23.6 3.0 28 216-246 1-28 (49)
76 d1rp3a1 a.4.13.1 (A:87-163) Si 49.7 22 0.0016 22.7 6.1 28 213-240 22-49 (77)
77 d2hoea1 a.4.5.63 (A:10-71) N-a 49.5 13 0.00095 23.1 4.6 33 217-249 12-44 (62)
78 d1rp3a2 a.4.13.2 (A:164-234) S 49.0 9.3 0.00068 24.0 3.9 30 213-242 33-62 (71)
79 d1xd7a_ a.4.5.55 (A:) Hypothet 48.9 9.4 0.00068 27.2 4.3 42 216-257 17-58 (127)
80 d1ui5a1 a.4.1.9 (A:5-75) A-fac 48.8 9.7 0.00071 24.1 4.0 33 201-233 8-41 (71)
81 d2hs5a1 a.4.5.6 (A:25-93) Puta 48.8 27 0.002 21.8 6.7 44 213-258 21-64 (69)
82 d2a61a1 a.4.5.28 (A:5-143) Tra 48.5 40 0.0029 23.7 9.2 47 215-261 42-91 (139)
83 d2hr2a1 a.118.8.8 (A:2-157) Hy 48.5 41 0.003 23.8 11.5 97 5-103 22-128 (156)
84 d1elra_ a.118.8.1 (A:) Hop {Hu 48.4 37 0.0027 23.3 8.6 61 34-103 6-66 (128)
85 d1tjca_ a.118.8.1 (A:) Prolyl 48.0 22 0.0016 23.2 6.1 59 4-62 17-76 (95)
86 d2gaua1 a.4.5.4 (A:152-232) Tr 47.7 11 0.00083 24.3 4.3 42 217-262 29-70 (81)
87 d1zk8a1 a.4.1.9 (A:6-77) Trans 47.6 11 0.00079 23.9 4.1 30 203-232 8-38 (72)
88 d2gfna1 a.4.1.9 (A:4-80) Proba 47.6 10 0.00076 24.3 4.1 34 200-233 8-42 (77)
89 d1ku3a_ a.4.13.2 (A:) Sigma70 47.2 16 0.0012 22.6 4.8 28 215-242 26-53 (61)
90 d2gena1 a.4.1.9 (A:6-75) Proba 46.4 11 0.00082 23.5 4.0 31 203-233 5-36 (70)
91 d2fd5a1 a.4.1.9 (A:1-76) Proba 44.9 16 0.0012 23.2 4.7 34 199-232 8-42 (76)
92 d1hw1a1 a.4.5.6 (A:5-78) Fatty 44.9 24 0.0017 22.6 5.5 38 213-250 22-60 (74)
93 d1z0xa1 a.4.1.9 (A:4-71) Trans 44.8 15 0.0011 22.9 4.5 32 201-232 5-38 (68)
94 d1xnfa_ a.118.8.1 (A:) Lipopro 44.7 57 0.0042 24.4 11.1 103 72-183 34-136 (259)
95 d1v7ba1 a.4.1.9 (A:1-74) Trans 44.4 11 0.00083 23.9 3.8 33 202-234 8-41 (74)
96 d1rkta1 a.4.1.9 (A:2-82) Hypot 43.7 23 0.0017 22.7 5.4 36 198-233 11-47 (81)
97 d1ft9a1 a.4.5.4 (A:134-213) CO 43.2 11 0.00078 24.5 3.6 32 217-248 30-61 (80)
98 d2g7sa1 a.4.1.9 (A:3-76) Putat 42.7 23 0.0016 22.3 5.2 34 201-234 7-41 (74)
99 d3broa1 a.4.5.28 (A:3-137) Tra 41.8 34 0.0024 23.9 6.6 43 214-256 42-84 (135)
100 d1vi0a1 a.4.1.9 (A:6-77) Hypot 41.6 15 0.0011 23.0 4.1 31 203-233 6-37 (72)
101 d1sgma1 a.4.1.9 (A:5-77) Putat 41.4 13 0.00092 23.5 3.6 31 202-232 6-37 (73)
102 d2p7vb1 a.4.13.2 (B:546-613) S 41.4 22 0.0016 22.5 4.8 29 215-243 23-51 (68)
103 d2hsga1 a.35.1.5 (A:2-58) Gluc 41.2 9.7 0.0007 23.5 2.8 22 217-238 1-22 (57)
104 d2np5a1 a.4.1.9 (A:9-77) Trans 41.1 20 0.0015 22.1 4.6 23 211-233 15-37 (69)
105 d1or7a1 a.4.13.2 (A:120-187) S 40.1 22 0.0016 22.1 4.6 31 212-242 29-59 (68)
106 d1u5ta2 a.4.5.54 (A:165-232) V 39.6 20 0.0015 22.9 4.3 46 208-255 8-53 (68)
107 d1bl0a1 a.4.1.8 (A:9-62) MarA 39.6 10 0.00076 22.5 2.8 28 214-241 16-43 (54)
108 d2i10a1 a.4.1.9 (A:10-78) Puta 39.3 12 0.00088 23.5 3.2 22 213-234 16-37 (69)
109 d2vkva1 a.4.1.9 (A:6-67) Tetra 39.0 13 0.00092 22.9 3.2 31 203-233 4-35 (62)
110 d3c07a1 a.4.1.9 (A:15-89) Puta 38.9 28 0.002 21.7 5.2 35 199-233 6-41 (75)
111 d2g7la1 a.4.1.9 (A:16-83) Puta 38.8 17 0.0013 22.6 4.0 22 211-232 18-39 (68)
112 d1d2za_ a.77.1.2 (A:) Pelle de 38.7 23 0.0017 24.0 4.9 51 220-288 28-82 (102)
113 d1ldja3 e.40.1.1 (A:411-686) C 38.6 24 0.0017 28.5 5.8 35 214-248 206-240 (276)
114 d1eija_ a.5.6.1 (A:) Hypotheti 38.3 11 0.00079 24.6 2.8 21 232-252 37-57 (72)
115 d2fbqa1 a.4.1.9 (A:2-80) Trans 38.3 20 0.0015 22.8 4.4 34 201-234 7-41 (79)
116 d1pb6a1 a.4.1.9 (A:14-85) Hypo 38.2 22 0.0016 22.4 4.4 33 201-233 7-40 (72)
117 d1tw3a1 a.4.5.29 (A:14-98) Car 37.7 17 0.0013 23.9 4.0 34 216-249 33-66 (85)
118 d2id6a1 a.4.1.9 (A:1-75) Trans 37.5 17 0.0012 23.0 3.8 33 202-234 7-40 (75)
119 d2hyja1 a.4.1.9 (A:8-82) Putat 35.7 27 0.0019 22.0 4.6 33 201-233 8-41 (75)
120 d1r7ja_ a.4.5.49 (A:) Sso10a ( 35.3 57 0.0042 21.7 8.0 33 216-248 17-49 (90)
121 d1j5ya1 a.4.5.1 (A:3-67) Putat 35.1 33 0.0024 21.1 4.9 30 217-246 22-51 (65)
122 d2oi8a1 a.4.1.9 (A:8-86) Putat 34.3 28 0.0021 22.1 4.6 34 199-232 10-44 (79)
123 d2d6ya1 a.4.1.9 (A:7-74) Putat 34.0 24 0.0018 21.9 4.1 31 203-233 7-38 (68)
124 d2o7ta1 a.4.1.9 (A:1-78) Trans 33.7 23 0.0017 22.6 4.1 33 201-233 10-43 (78)
125 d2bgca1 a.4.5.4 (A:138-237) Li 33.3 54 0.004 22.1 6.2 54 217-278 31-85 (100)
126 d1ttya_ a.4.13.2 (A:) Sigma70 33.1 22 0.0016 23.7 3.9 29 215-243 36-64 (87)
127 d1nzna_ a.118.8.1 (A:) Mitocho 31.9 72 0.0052 21.8 8.2 64 34-104 35-101 (122)
128 d1hsja1 a.4.5.28 (A:373-487) S 31.8 40 0.0029 23.2 5.4 43 215-257 46-88 (115)
129 d2fx0a1 a.4.1.9 (A:4-76) Hemol 31.5 40 0.0029 21.1 4.9 34 201-234 7-41 (73)
130 d1s7oa_ a.4.13.3 (A:) Hypothet 31.4 23 0.0017 24.5 3.9 32 212-243 27-58 (106)
131 d2fbna1 a.118.8.1 (A:22-174) P 31.3 80 0.0058 22.1 12.3 80 25-104 7-96 (153)
132 d2onda1 a.118.8.7 (A:242-549) 31.3 1.1E+02 0.0081 23.8 9.1 27 34-60 101-127 (308)
133 d1biaa1 a.4.5.1 (A:1-63) Bioti 31.2 36 0.0026 20.9 4.5 33 214-246 16-48 (63)
134 d1d5ya1 a.4.1.8 (A:3-56) Rob t 30.8 24 0.0018 20.7 3.5 27 214-240 16-42 (54)
135 d2pqrb1 a.118.8.1 (B:5-128) Mi 30.1 57 0.0041 23.1 6.0 53 5-62 51-103 (124)
136 d1mlaa2 d.58.23.1 (A:128-197) 29.6 10 0.00076 24.3 1.6 41 223-263 5-46 (70)
137 d2iu5a1 a.4.1.9 (A:1-71) Trans 29.4 30 0.0022 21.5 3.9 22 211-232 20-41 (71)
138 d1xsva_ a.4.13.3 (A:) Hypothet 28.9 22 0.0016 24.7 3.4 30 213-242 30-59 (106)
139 d2g3ba1 a.4.1.9 (A:2-73) Putat 28.9 39 0.0028 21.0 4.5 32 202-233 6-38 (72)
140 d1ya0a1 a.118.8.1 (A:1-497) SM 27.8 82 0.0059 27.1 8.1 64 33-105 153-216 (497)
141 d1efaa1 a.35.1.5 (A:2-60) Lac 27.7 19 0.0014 22.2 2.6 23 216-238 1-23 (59)
142 d1ucra_ a.4.5.45 (A:) Dissimil 27.4 39 0.0028 21.7 4.0 35 214-248 18-53 (74)
143 d2fq4a1 a.4.1.9 (A:9-77) Trans 27.3 54 0.004 20.1 5.0 32 202-233 8-40 (69)
144 d2fbka1 a.4.5.28 (A:8-179) Tra 27.3 19 0.0014 26.9 3.0 42 217-258 79-120 (172)
145 d1xn7a_ a.4.5.62 (A:) Hypothet 26.7 50 0.0036 21.3 4.5 44 209-253 8-51 (78)
146 d1wwha1 d.58.7.1 (A:169-249) N 26.4 28 0.0021 22.5 3.5 44 227-270 10-56 (81)
147 d1t6sa1 a.4.5.60 (A:1-85) Segr 26.3 25 0.0018 23.1 3.2 56 216-276 21-82 (85)
148 d1yioa1 a.4.6.2 (A:131-200) Re 25.8 55 0.004 20.3 4.8 35 208-242 18-52 (70)
149 d1uxda_ a.35.1.5 (A:) Fructose 25.3 21 0.0016 21.9 2.4 22 218-239 1-22 (59)
150 d1v4ra1 a.4.5.6 (A:1-100) Tran 24.9 21 0.0015 24.3 2.6 47 213-261 28-75 (100)
151 d1qzza1 a.4.5.29 (A:10-101) Ac 24.3 38 0.0027 22.6 3.9 34 216-249 39-72 (92)
152 d2crua1 a.5.6.1 (A:8-112) Prog 23.8 12 0.00088 26.2 1.1 21 232-252 60-80 (105)
153 d2ff4a2 a.118.8.3 (A:105-283) 23.4 97 0.0071 22.6 6.7 63 30-101 65-127 (179)
154 d1st6a6 a.24.9.1 (A:647-718) V 23.0 19 0.0014 23.2 1.9 56 222-288 10-71 (72)
155 d1jjcb2 a.6.1.1 (B:400-474) Do 22.1 36 0.0026 21.7 3.3 60 217-290 6-67 (75)
156 d1e0ga_ d.7.1.1 (A:) Membrane- 22.1 32 0.0023 20.1 2.7 17 219-235 12-28 (48)
157 d2dt5a1 a.4.5.38 (A:4-77) Tran 22.0 46 0.0033 21.4 3.7 29 215-243 23-51 (74)
158 d1r1ta_ a.4.5.5 (A:) SmtB repr 21.8 88 0.0064 20.7 5.6 44 216-261 35-78 (98)
159 d2hyec3 e.40.1.1 (C:403-675) C 21.3 59 0.0043 25.8 5.3 31 215-245 203-233 (273)
160 d1f5ta2 a.76.1.1 (A:1065-1121) 21.1 23 0.0017 21.4 2.0 20 222-241 21-40 (57)
161 d1x2ma1 a.4.1.1 (A:8-59) Lag1 21.1 29 0.0021 20.6 2.4 22 215-236 19-40 (52)
162 d2f2ea1 a.4.5.69 (A:5-146) Hyp 20.8 1.1E+02 0.0079 21.9 6.2 47 215-261 31-77 (142)
163 d2esha1 a.4.5.61 (A:4-117) Hyp 20.6 1.2E+02 0.0088 20.5 6.4 64 228-291 43-108 (114)
164 d1wi6a1 d.58.7.1 (A:69-143) Ri 20.3 32 0.0023 21.6 2.7 37 228-267 9-47 (75)
No 1
>d1ufma_ a.4.5.47 (A:) COP9 signalosome complex subunit 4, GSN4 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.82 E-value=7.7e-21 Score=139.64 Aligned_cols=69 Identities=29% Similarity=0.543 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHhhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCC
Q psy4458 197 KMLKHRVVEHNIRVMAKYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKD 265 (303)
Q Consensus 197 ~~l~~~i~ehNi~~isk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~ 265 (303)
..|+++++||||++++++|++|+|++||++|++|++++|..|++||.+|+|+|+|||++|+|+|+.++.
T Consensus 10 t~L~~~i~Ehni~~is~~Y~~Isl~~la~~l~l~~~evE~~l~~mI~~~~i~akIDq~~g~V~F~~~e~ 78 (84)
T d1ufma_ 10 SILDRAVIEHNLLSASKLYNNITFEELGALLEIPAAKAEKIASQMITEGRMNGFIDQIDGIVHFETREA 78 (84)
T ss_dssp CCCCHHHHHHHHHHHHHSCSEEEHHHHHHHTTSCHHHHHHHHHHHHHTTSSCEEEETTTTEEEECCSSC
T ss_pred HHHHHHHHHHHHHHHHHhhceeeHHHHHHHHCCCHHHHHHHHHHHHhcCeEEEEEeCCCCEEEECCCCc
Confidence 568899999999999999999999999999999999999999999999999999999999999998754
No 2
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.35 E-value=0.31 Score=40.51 Aligned_cols=169 Identities=11% Similarity=0.142 Sum_probs=89.7
Q ss_pred cCCHHHHHHHHhccccccccCC-chHHHHHHHHHHHHHHHh-hcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 5 EGDVTEAANIIQELQVETYGSM-EKKEKVTLILEQMRLCLA-KKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i~vet~~~~-~~~~k~~~~L~~~rL~L~-~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
.|++++|...+... ++-+... ....-...+...+.++.. .+|+..|.....++...... .+ ........+.-++
T Consensus 90 ~~~~~~A~~~~~~a-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~A~~~~~~A~~l~~~-~~--~~~~~~~~~~~la 165 (290)
T d1qqea_ 90 GGNSVNAVDSLENA-IQIFTHRGQFRRGANFKFELGEILENDLHDYAKAIDCYELAGEWYAQ-DQ--SVALSNKCFIKCA 165 (290)
T ss_dssp TTCHHHHHHHHHHH-HHHHHHTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH-TT--CHHHHHHHHHHHH
T ss_pred hCCcHHHHHHHHHh-hHHhhhcccchhHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHh-cC--chhhhhhHHHHHH
Confidence 45666666655532 2222111 122223444555555543 58888888888877765532 23 3334455666689
Q ss_pred HHHHHhhhHHHHHHHHHHHHcCCCCCC-ChHHHHHHHHHHHHHHHhCCCCchhhHhHHHhh-hhhhc---CCchHHHHHH
Q psy4458 83 ELDQHEGSYLATCKHYRAILTTPCIQS-DPVQRHAVLQNVVLYLMLAPYDNEQSDLTHRVL-EDKLL---NEIPLYKGLL 157 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~~~t~~~~~-~~~~~~~~L~~~v~~~iLs~~~~~r~~ll~~l~-~~~~~---~~~p~~~~L~ 157 (303)
.++...++|-+|...|..+........ ........+..+.+|.+...-...-...+.+.. .+|.. .+...+..|+
T Consensus 166 ~~~~~~g~y~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~A~~~~~~~~~~~~~~~~sre~~~l~~l~ 245 (290)
T d1qqea_ 166 DLKALDGQYIEASDIYSKLIKSSMGNRLSQWSLKDYFLKKGLCQLAATDAVAAARTLQEGQSEDPNFADSRESNFLKSLI 245 (290)
T ss_dssp HHHHHTTCHHHHHHHHHHHHHTTSSCTTTGGGHHHHHHHHHHHHHHTTCHHHHHHHHHGGGCC---------HHHHHHHH
T ss_pred HHHHHcChHHHHHHHHHHHHHhCccchhhhhhHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhCCCccchHHHHHHHHHH
Confidence 999999999999999999876543211 111122334445555544433222222233322 23322 1223356677
Q ss_pred HHhcCCcccCchHHHHHHHH
Q psy4458 158 QWFTNPELIKWSGLRQLYEE 177 (303)
Q Consensus 158 ~~f~~~~li~~~~~~~~~~~ 177 (303)
.++..+++-.|.+.+..|..
T Consensus 246 ~a~~~~d~e~~~eai~~y~~ 265 (290)
T d1qqea_ 246 DAVNEGDSEQLSEHCKEFDN 265 (290)
T ss_dssp HHHHTTCTTTHHHHHHHHTT
T ss_pred HHHHhcCHHHHHHHHHHHHH
Confidence 88887777667666666644
No 3
>d1wi9a_ a.4.5.47 (A:) Hypothetical protein C20orf116 homolog {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.36 E-value=0.075 Score=35.41 Aligned_cols=52 Identities=17% Similarity=0.250 Sum_probs=46.4
Q ss_pred HhhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccC
Q psy4458 212 AKYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARN 263 (303)
Q Consensus 212 sk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~ 263 (303)
.+-=+.+.++.||..||+..+++-.-|-++..+|+|.|.||-....|...+.
T Consensus 16 Ik~~Kvv~LedLAa~F~lktqd~i~RIq~Le~~g~ltGViDDRGKfIyIS~s 67 (72)
T d1wi9a_ 16 IKKSKVVLLEDLAFQMGLRTQDAINRIQDLLTEGTLTGVIDDRGKFIYITPS 67 (72)
T ss_dssp HHHCSEECHHHHHHHHCSCHHHHHHHHHHHHHHSSSCEEECTTCCEEECCCS
T ss_pred HHHCCEeeHHHHHHHcCCcHHHHHHHHHHHHHCCCeeeEEcCCCCEEEEcCC
Confidence 3446889999999999999999999999999999999999998888877654
No 4
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.02 E-value=0.14 Score=35.56 Aligned_cols=70 Identities=11% Similarity=0.070 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 33 TLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 33 ~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
|=++++.+.+...|||..|.....++-........ .+..+...+...+..+...++|.+|-.+|.+++.-
T Consensus 6 ddc~~lG~~~~~~g~y~~A~~~~~~Al~~~~~~~~--~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l 75 (95)
T d1tjca_ 6 EDSFELGKVAYTEADYYHTELWMEQALRQLDEGEI--STIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLEL 75 (95)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTTCC--CSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhhhc--cCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHh
Confidence 34789999999999999999999999766533322 23334556667899999999999999999999753
No 5
>d1sfxa_ a.4.5.50 (A:) Hypothetical protein AF2008 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=92.93 E-value=0.52 Score=33.62 Aligned_cols=70 Identities=11% Similarity=0.158 Sum_probs=54.4
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCChhHHHHHHHHHHHHHHHHH
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDPGEILNEWSASLNELMKLV 284 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~i~~l~~~v 284 (303)
...+|...||+.+|++..-|-..+.+|...|-+.-.+++.+|....-.+.++.+.+..-.+++..-++.+
T Consensus 32 ~g~~t~~eia~~~~i~~~~v~~~l~~L~~~GlV~r~~~~~~~r~~~~~a~~~~e~l~~~~~~~~~~l~eL 101 (109)
T d1sfxa_ 32 RGGMRVSEIARELDLSARFVRDRLKVLLKRGFVRREIVEKGWVGYIYSAEKPEKVLKEFKSSILGEIERI 101 (109)
T ss_dssp HCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEEESSSEEEEEEECCHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHhCCCcchHHHHHHHHHhCCCEEEEeccCCCccccccCCCHHHHHHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999999998888887777554445556666665555554444444
No 6
>d1ub9a_ a.4.5.28 (A:) Hypothetical protein PH1061 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=91.90 E-value=0.59 Score=32.59 Aligned_cols=70 Identities=7% Similarity=0.014 Sum_probs=52.8
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccC-CChhHHHHHHHHHHHHHHHHH
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARN-KDPGEILNEWSASLNELMKLV 284 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~-~~~~~~l~~w~~~i~~l~~~v 284 (303)
...+++..||+.+|++..-+=..+..|...|-+...-|..++-..+-.- ....+.+..|...+..+.+.+
T Consensus 28 ~~~~~~~eLa~~l~is~~~vs~~l~~L~~~glV~~~~~~~d~r~~~~~LT~~G~~~~~~~~~~~~~~~~~l 98 (100)
T d1ub9a_ 28 RRKAPFSQIQKVLDLTPGNLDSHIRVLERNGLVKTYKVIADRPRTVVEITDFGMEEAKRFLSSLKAVIDGL 98 (100)
T ss_dssp HSEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeeHHHHHHHHhhccccccHHHHHHhhhceeEEEEcCcCCccccccCCHHHHHHHHHHHHHHHHHHHhh
Confidence 4679999999999999999999999999999999888777664333222 222356777776666666554
No 7
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=91.68 E-value=0.63 Score=37.81 Aligned_cols=96 Identities=10% Similarity=0.025 Sum_probs=72.6
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|++++|...+... ++....-+....+..+..++.++...||+..|.....++-...... + +...........+.
T Consensus 24 ~~g~~~~A~~~~~~a-L~~~~~~~~~~~~~a~~~lg~~~~~~g~~~~A~~~~~~a~~~~~~~-~--~~~~~~~~~~~~~~ 99 (366)
T d1hz4a_ 24 NDGNPDEAERLAKLA-LEELPPGWFYSRIVATSVLGEVLHCKGELTRSLALMQQTEQMARQH-D--VWHYALWSLIQQSE 99 (366)
T ss_dssp HTTCHHHHHHHHHHH-HHTCCTTCHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHT-T--CHHHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHH-HhhCcCCCcHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhh-c--chHHHHHHHHHHHH
Confidence 469999999998764 3333444556677778889999999999999999999887665332 2 34444555667788
Q ss_pred HHHHhhhHHHHHHHHHHHHc
Q psy4458 84 LDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~ 103 (303)
.+...++|..+...|.+...
T Consensus 100 ~~~~~~~~~~a~~~~~~al~ 119 (366)
T d1hz4a_ 100 ILFAQGFLQTAWETQEKAFQ 119 (366)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 88899999999998888764
No 8
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=91.46 E-value=0.11 Score=34.64 Aligned_cols=39 Identities=10% Similarity=0.211 Sum_probs=35.6
Q ss_pred ceeeHHHHHHHh-CCCHHHHHHHHHhhhhcCceEEEecCC
Q psy4458 216 TRITLQRMCDLL-GLPIEETEEFLSSMVVSKTITAKIDRP 254 (303)
Q Consensus 216 ~~Itl~~la~ll-~ls~~~vE~~l~~mI~~~~l~akIDq~ 254 (303)
.=|+++.|++.| |+|+.++...+-.|+.+|-|+..||.-
T Consensus 22 eGi~~~el~~~l~~~~~~~i~~aid~L~~eG~IYsTiDdd 61 (69)
T d1dpua_ 22 EGLNFQDLKNQLKHMSVSSIKQAVDFLSNEGHIYSTVDDD 61 (69)
T ss_dssp TTEEHHHHHHHSTTSCHHHHHHHHHHHHHTTSEEECSSTT
T ss_pred cCcCHHHHHHHccCCCHHHHHHHHHHHHhCCceecccccc
Confidence 458999999988 899999999999999999999999963
No 9
>d1qqea_ a.118.8.1 (A:) Vesicular transport protein sec17 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=91.01 E-value=0.48 Score=39.22 Aligned_cols=98 Identities=8% Similarity=-0.023 Sum_probs=62.0
Q ss_pred ccCCHHHHHHHHhccccccc-cCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETY-GSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~-~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
..|+|++|.+.....- +.+ ..-+...-...+...++++...+++..|....+++.......+. .......+.....
T Consensus 49 ~~~~~~~A~~~y~kA~-~~~~~~~~~~~~a~~~~~~g~~y~~~~~~~~A~~~~~~a~~~~~~~~~--~~~~~~~~~~l~~ 125 (290)
T d1qqea_ 49 LRKELNLAGDSFLKAA-DYQKKAGNEDEAGNTYVEAYKCFKSGGNSVNAVDSLENAIQIFTHRGQ--FRRGANFKFELGE 125 (290)
T ss_dssp HTTCTHHHHHHHHHHH-HHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTC--HHHHHHHHHHHHH
T ss_pred HCcCHHHHHHHHHHHH-HHHHHcCCCHHHHHHHHHHHHHHHHhCCcHHHHHHHHHhhHHhhhccc--chhHHHHHHHHHH
Confidence 3566777766654321 111 12233445678888999999999999999999988776644333 2233233333333
Q ss_pred HHHHHhhhHHHHHHHHHHHHcC
Q psy4458 83 ELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~~~t 104 (303)
.+....++|.+|...|..+...
T Consensus 126 ~~~~~~~~~~~A~~~~~~A~~l 147 (290)
T d1qqea_ 126 ILENDLHDYAKAIDCYELAGEW 147 (290)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHH
T ss_pred hHhhHHHHHHHHHHHHHHHHHH
Confidence 3445669999999999888654
No 10
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=90.40 E-value=0.34 Score=31.87 Aligned_cols=46 Identities=9% Similarity=0.024 Sum_probs=37.8
Q ss_pred HHHHHHHHHH---hhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 203 VVEHNIRVMA---KYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 203 i~ehNi~~is---k~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
+.++|...+- +-.-.+|-..||+.+|+|+.-+-..+.+|+.+|.+.
T Consensus 3 ir~~N~~~Il~~l~~~g~~sr~eLa~~~glS~~Tv~~~l~~L~~~Glv~ 51 (71)
T d1z05a1 3 IKQINAGRVYKLIDQKGPISRIDLSKESELAPASITKITRELIDAHLIH 51 (71)
T ss_dssp HHHHHHHHHHHHHHHHCSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred HHHHHHHHHHHHHHHcCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 4455544443 347789999999999999999999999999999885
No 11
>d2cfxa1 a.4.5.32 (A:1-63) Transcriptional regulator LrpC {Bacillus subtilis [TaxId: 1423]}
Probab=89.98 E-value=0.41 Score=30.83 Aligned_cols=35 Identities=11% Similarity=0.149 Sum_probs=32.6
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
=.++++..||+.+|+|+..|..-+.+|..+|-|.+
T Consensus 17 n~r~s~~~iA~~lgis~~tv~~Ri~~L~~~giI~~ 51 (63)
T d2cfxa1 17 DSRLSMRELGRKIKLSPPSVTERVRQLESFGIIKQ 51 (63)
T ss_dssp CSCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeee
Confidence 47889999999999999999999999999998855
No 12
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.40 E-value=2.8 Score=31.48 Aligned_cols=116 Identities=13% Similarity=0.090 Sum_probs=73.1
Q ss_pred CCchHHHHHHHH---HHHHHHHhhcchhHHHHHHHHhhhhccCCCCc------chHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy4458 25 SMEKKEKVTLIL---EQMRLCLAKKDYIRTQIISKKINTKFFDDEKD------DVQELKLKYYRLMIELDQHEGSYLATC 95 (303)
Q Consensus 25 ~~~~~~k~~~~L---~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~------~~~e~k~~y~~~~~~~~~~~~~f~eaa 95 (303)
.|+..+|++... +.+..++..|||..|...-+++-..+....+. ....++...+.-++..+...++|-+|-
T Consensus 3 ~~~~~ek~~~a~~l~~~G~~~~~~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~ 82 (170)
T d1p5qa1 3 EMNSEEKLEQSTIVKERGTVYFKEGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAI 82 (170)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhccccc
Confidence 377888887644 66778999999999999888887655322210 123344455556788899999999999
Q ss_pred HHHHHHHcCCCCCCChHHHHHHHHHHHHHHHhCCCCchhhHhHHHhhhhh
Q psy4458 96 KHYRAILTTPCIQSDPVQRHAVLQNVVLYLMLAPYDNEQSDLTHRVLEDK 145 (303)
Q Consensus 96 ~~y~e~~~t~~~~~~~~~~~~~L~~~v~~~iLs~~~~~r~~ll~~l~~~~ 145 (303)
..|..++... |......+..+..+.-+..+..-...+-..+..+|
T Consensus 83 ~~~~~al~~~-----p~~~~a~~~~g~~~~~~g~~~~A~~~~~~al~l~P 127 (170)
T d1p5qa1 83 ESCNKALELD-----SNNEKGLSRRGEAHLAVNDFELARADFQKVLQLYP 127 (170)
T ss_dssp HHHHHHHHHC-----TTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCS
T ss_pred chhhhhhhcc-----ccchhhhHHHHHHHHHhhhHHHHHHHHHHHHHhCC
Confidence 9999998532 22222223334555555555444444444444444
No 13
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=89.28 E-value=1.7 Score=31.19 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=69.4
Q ss_pred cCCHHHHHHHHhcc-ccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 5 EGDVTEAANIIQEL-QVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i-~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
.|++++|...+... .+.. .-...+...+.++...|+|..|....+++-.......+ .+...-+-+.-++.
T Consensus 17 ~~~y~~Ai~~y~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~l~~~~~~--~~~~~a~~~~~lg~ 87 (128)
T d1elra_ 17 KKDFDTALKHYDKAKELDP-------TNMTYITNQAAVYFEKGDYNKCRELCEKAIEVGRENRE--DYRQIAKAYARIGN 87 (128)
T ss_dssp TTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHSTT--CHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhCc-------ccHHHHHhHHHHHHHcCchHHHHHHHHHHHHhCcccHH--HHHHHHHHHHHHHH
Confidence 58999999887554 3321 23567888999999999999999999987654433333 55555567778899
Q ss_pred HHHHhhhHHHHHHHHHHHHcCC
Q psy4458 84 LDQHEGSYLATCKHYRAILTTP 105 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~t~ 105 (303)
.+...++|.+|-..|...+...
T Consensus 88 ~~~~~~~~~~A~~~~~kal~~~ 109 (128)
T d1elra_ 88 SYFKEEKYKDAIHFYNKSLAEH 109 (128)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHC
T ss_pred HHHHhCCHHHHHHHHHHHHhcC
Confidence 9999999999999998876543
No 14
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=88.92 E-value=0.4 Score=31.55 Aligned_cols=46 Identities=9% Similarity=0.153 Sum_probs=38.4
Q ss_pred HHHHHHHHHHh---hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 203 VVEHNIRVMAK---YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 203 i~ehNi~~isk---~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
+.++|...+.+ -...+|=..||+.+|+|..-+-..+.+|+..|.+.
T Consensus 2 ir~~N~~~Il~~i~~~g~~sr~eLa~~~gLS~~Tvs~iv~~L~~~glv~ 50 (70)
T d1z6ra1 2 IKQTNAGAVYRLIDQLGPVSRIDLSRLAQLAPASITKIVHEMLEAHLVQ 50 (70)
T ss_dssp HHHHHHHHHHHHHHSSCSCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEE
T ss_pred hhHHHHHHHHHHHHHcCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEE
Confidence 34566555543 48889999999999999999999999999999874
No 15
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=87.49 E-value=2.8 Score=29.14 Aligned_cols=84 Identities=10% Similarity=-0.111 Sum_probs=58.0
Q ss_pred CccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 3 EDEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 3 e~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
...|++.+|...+..+-..... =.+.+...+.++...+++..|....+++-..-. .. ...+...+
T Consensus 27 ~~~g~~~~A~~~~~~al~~~p~------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p--~~-------~~a~~~la 91 (112)
T d1hxia_ 27 LKLANLAEAALAFEAVCQKEPE------REEAWRSLGLTQAENEKDGLAIIALNHARMLDP--KD-------IAVHAALA 91 (112)
T ss_dssp HHTTCHHHHHHHHHHHHHHSTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TC-------HHHHHHHH
T ss_pred HHHhhhHHHHHHHhhhcccccc------cchhhhhhhhhhhhhhhHHHhhccccccccccc--cc-------ccchHHHH
Confidence 3568888888888876432211 146677788888888999999888888766542 11 12334578
Q ss_pred HHHHHhhhHHHHHHHHHHH
Q psy4458 83 ELDQHEGSYLATCKHYRAI 101 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~ 101 (303)
..+...+++.+|-++|...
T Consensus 92 ~~y~~~g~~~~A~~~l~~~ 110 (112)
T d1hxia_ 92 VSHTNEHNANAALASLRAW 110 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHH
Confidence 8888888888888777654
No 16
>d2cg4a1 a.4.5.32 (A:4-66) Regulatory protein AsnC {Escherichia coli [TaxId: 562]}
Probab=86.58 E-value=0.71 Score=29.57 Aligned_cols=35 Identities=17% Similarity=0.214 Sum_probs=32.4
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
=.++|+..||+.+|+|+..+-.-+-+|..+|-|.+
T Consensus 17 ~~r~s~~eiA~~l~ls~~~v~~Ri~rL~~~GiI~~ 51 (63)
T d2cg4a1 17 NARTAYAELAKQFGVSPETIHVRVEKMKQAGIITG 51 (63)
T ss_dssp CTTSCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEE
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEe
Confidence 37889999999999999999999999999998854
No 17
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.40 E-value=2.2 Score=32.13 Aligned_cols=84 Identities=7% Similarity=-0.060 Sum_probs=64.1
Q ss_pred ccCCHHHHHHHHhc-cccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQE-LQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~-i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
..|++++|...+.. |..... -..++...+.+++..|+|..|....+++-..- .. ..+ -+...|
T Consensus 16 ~~g~~~~Ai~~~~kal~~~p~-------~~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l~--p~---~~~----a~~~lg 79 (201)
T d2c2la1 16 VGRKYPEAAACYGRAITRNPL-------VAVYYTNRALCYLKMQQPEQALADCRRALELD--GQ---SVK----AHFFLG 79 (201)
T ss_dssp HTTCHHHHHHHHHHHHHHCSC-------CHHHHHHHHHHHHHTTCHHHHHHHHHHHTTSC--TT---CHH----HHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCC-------CHHHHHhHHHHHhhhhhhhhhhHHHHHHHHhC--CC---cHH----HHHHHH
Confidence 46999999999964 455421 14577788899999999999999999986533 11 222 345589
Q ss_pred HHHHHhhhHHHHHHHHHHHHc
Q psy4458 83 ELDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~~~ 103 (303)
..+...++|-+|...|..++.
T Consensus 80 ~~~~~l~~~~~A~~~~~~al~ 100 (201)
T d2c2la1 80 QCQLEMESYDEAIANLQRAYS 100 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHHHHH
Confidence 999999999999999998764
No 18
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=86.27 E-value=3.6 Score=30.20 Aligned_cols=66 Identities=11% Similarity=-0.033 Sum_probs=54.2
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 30 EKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 30 ~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
+|.+-+..++..++..|||..|....+++-.... .. ..++...+..+...+++.+|...|..++.-
T Consensus 8 ~~a~~l~~~gn~~~~~~~y~~A~~~~~~al~~~p--~~-------~~~~~~lg~~~~~~~~~~~A~~~~~kal~~ 73 (159)
T d1a17a_ 8 KRAEELKTQANDYFKAKDYENAIKFYSQAIELNP--SN-------AIYYGNRSLAYLRTECYGYALGDATRAIEL 73 (159)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHST--TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHhhhccccch--hh-------hhhhhhhHHHHHhccccchHHHHHHHHHHH
Confidence 6777788999999999999999999998886542 11 345566888999999999999999999753
No 19
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=85.23 E-value=4.4 Score=31.51 Aligned_cols=88 Identities=8% Similarity=0.026 Sum_probs=64.5
Q ss_pred CCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHH
Q psy4458 6 GDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELD 85 (303)
Q Consensus 6 ~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~ 85 (303)
++.+.|..-+.++-. -..+...++.+++...+.++...|+|..|....+++-.... + +. ..+..+|..+
T Consensus 13 ~~~e~al~~~~e~l~--~~~~~~~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p--~---~~----~a~~~lg~~~ 81 (259)
T d1xnfa_ 13 LQQEVILARMEQILA--SRALTDDERAQLLYERGVLYDSLGLRALARNDFSQALAIRP--D---MP----EVFNYLGIYL 81 (259)
T ss_dssp HHHHHHHHHHHHHHT--SSCCCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCC--C---CH----HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH--hhhcCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCC--C---CH----HHHhhhchHH
Confidence 334444444444321 12346778999999999999999999999999999876542 2 21 2344689999
Q ss_pred HHhhhHHHHHHHHHHHHcC
Q psy4458 86 QHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 86 ~~~~~f~eaa~~y~e~~~t 104 (303)
...++|.+|-.+|..++..
T Consensus 82 ~~~g~~~~A~~~~~~al~~ 100 (259)
T d1xnfa_ 82 TQAGNFDAAYEAFDSVLEL 100 (259)
T ss_dssp HHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhhhhhhHHHHH
Confidence 9999999999999999864
No 20
>d1a17a_ a.118.8.1 (A:) Protein phosphatase 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=85.22 E-value=2.1 Score=31.63 Aligned_cols=86 Identities=10% Similarity=0.001 Sum_probs=65.3
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|++++|...+...--- .+ .-..++...+.+++..|++..|....+++-.... . +. .-+..+|.
T Consensus 22 ~~~~y~~A~~~~~~al~~-----~p-~~~~~~~~lg~~~~~~~~~~~A~~~~~kal~~~p--~---~~----~a~~~~g~ 86 (159)
T d1a17a_ 22 KAKDYENAIKFYSQAIEL-----NP-SNAIYYGNRSLAYLRTECYGYALGDATRAIELDK--K---YI----KGYYRRAA 86 (159)
T ss_dssp HTTCHHHHHHHHHHHHHH-----ST-TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T---CH----HHHHHHHH
T ss_pred HcCCHHHHHHHhhhcccc-----ch-hhhhhhhhhHHHHHhccccchHHHHHHHHHHHcc--c---ch----HHHHHHHH
Confidence 368999999888765311 11 2356788899999999999999999999976542 1 22 23455888
Q ss_pred HHHHhhhHHHHHHHHHHHHcC
Q psy4458 84 LDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~t 104 (303)
.+...++|.+|..+|..+...
T Consensus 87 ~~~~~g~~~eA~~~~~~a~~~ 107 (159)
T d1a17a_ 87 SNMALGKFRAALRDYETVVKV 107 (159)
T ss_dssp HHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHcCCHHHHHHHHHHHHHc
Confidence 899999999999999999754
No 21
>d1i1ga1 a.4.5.32 (A:2-61) LprA {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=84.48 E-value=0.7 Score=29.34 Aligned_cols=34 Identities=12% Similarity=0.193 Sum_probs=31.5
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
=.++|++.||+.+|+|++.+-.-+-+|..+|-|.
T Consensus 15 n~r~s~~~lA~~~gls~~~v~~Ri~~L~~~giI~ 48 (60)
T d1i1ga1 15 DARTPFTEIAKKLGISETAVRKRVKALEEKGIIE 48 (60)
T ss_dssp CTTCCHHHHHHHHTSCHHHHHHHHHHHHHHTSSC
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeE
Confidence 4789999999999999999999999999999764
No 22
>d1hh8a_ a.118.8.1 (A:) Neutrophil cytosolic factor 2 (NCF-2, p67-phox) {Human (Homo sapiens) [TaxId: 9606]}
Probab=83.46 E-value=3.8 Score=31.43 Aligned_cols=82 Identities=12% Similarity=0.060 Sum_probs=62.2
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|+|++|.+....+. +... .++...+.+++..|++..|....+|+-..- .. . ..-+..+|.
T Consensus 17 ~~~d~~~Al~~~~~i~-------~~~~--~~~~nlG~~~~~~g~~~~A~~~~~kAl~ld--p~---~----~~a~~~~g~ 78 (192)
T d1hh8a_ 17 DKKDWKGALDAFSAVQ-------DPHS--RICFNIGCMYTILKNMTEAEKAFTRSINRD--KH---L----AVAYFQRGM 78 (192)
T ss_dssp HTTCHHHHHHHHHTSS-------SCCH--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHC--TT---C----HHHHHHHHH
T ss_pred HCCCHHHHHHHHHhcC-------CCCH--HHHHHHHHHHHHcCCchhHHHHHHHHHHHh--hh---h----hhhHHHHHH
Confidence 4789999999988763 1122 357788999999999999999999987543 11 1 223345788
Q ss_pred HHHHhhhHHHHHHHHHHHHc
Q psy4458 84 LDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~ 103 (303)
.+...++|.+|-..|..++.
T Consensus 79 ~~~~~g~~~~A~~~~~kAl~ 98 (192)
T d1hh8a_ 79 LYYQTEKYDLAIKDLKEALI 98 (192)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHhhccHHHHHHHHHHHHH
Confidence 88999999999999888864
No 23
>d2cyya1 a.4.5.32 (A:5-64) Putative transcriptional regulator PH1519 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=82.57 E-value=0.81 Score=28.94 Aligned_cols=34 Identities=18% Similarity=0.236 Sum_probs=31.5
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
=.++++..||+.+|+|+..|..-+-+|..+|-|.
T Consensus 15 n~r~s~~eiA~~l~ls~~~v~~Ri~~L~~~giI~ 48 (60)
T d2cyya1 15 DGKAPLREISKITGLAESTIHERIRKLRESGVIK 48 (60)
T ss_dssp CTTCCHHHHHHHHCSCHHHHHHHHHHHHHHTSSC
T ss_pred cCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeE
Confidence 3788999999999999999999999999999775
No 24
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=82.49 E-value=9.1 Score=30.73 Aligned_cols=85 Identities=7% Similarity=-0.039 Sum_probs=47.2
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|++++|...+...- +... .-.+.+...++++...+++..|....+++...... .. ..+..++.
T Consensus 181 ~~~~~~~A~~~~~~al-~~~p-----~~~~~~~~l~~~~~~~~~~~~A~~~~~~~~~~~~~-----~~----~~~~~l~~ 245 (388)
T d1w3ba_ 181 AQGEIWLAIHHFEKAV-TLDP-----NFLDAYINLGNVLKEARIFDRAVAAYLRALSLSPN-----HA----VVHGNLAC 245 (388)
T ss_dssp TTTCHHHHHHHHHHHH-HHCT-----TCHHHHHHHHHHHHTTTCTTHHHHHHHHHHHHCTT-----CH----HHHHHHHH
T ss_pred ccCcHHHHHHHHHHHH-HhCc-----ccHHHHHHHhhhhhccccHHHHHHHHHHhHHHhhh-----HH----HHHHHHHH
Confidence 4577777777665431 1100 11345566677777777777777776666543311 11 11223455
Q ss_pred HHHHhhhHHHHHHHHHHHHc
Q psy4458 84 LDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~ 103 (303)
.+...+++.+|-..|..++.
T Consensus 246 ~~~~~~~~~~A~~~~~~al~ 265 (388)
T d1w3ba_ 246 VYYEQGLIDLAIDTYRRAIE 265 (388)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHCCCHHHHHHHHHHHHH
Confidence 55666667666666666654
No 25
>d2fbha1 a.4.5.28 (A:8-144) Transcriptional regulator PA3341 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=81.14 E-value=5.3 Score=28.73 Aligned_cols=44 Identities=7% Similarity=-0.012 Sum_probs=39.8
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
.-..++.+.||+.++++..-+-..+..|+..|-|.-..|..++-
T Consensus 40 ~~~~~t~~~la~~~~~~~~~vs~~v~~L~~~gli~r~~~~~D~R 83 (137)
T d2fbha1 40 HRDSPTQRELAQSVGVEGPTLARLLDGLESQGLVRRLAVAEDRR 83 (137)
T ss_dssp CSSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCBTTBC
T ss_pred cCCCCcHHHHHHHHCCCHHHHHHHHHHHHHcCCccccCCCCCCC
Confidence 33469999999999999999999999999999999999888874
No 26
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.32 E-value=7.1 Score=26.99 Aligned_cols=64 Identities=9% Similarity=-0.048 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHc
Q psy4458 31 KVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 31 k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~ 103 (303)
+++=+.+.+..++..|+|..|-...+++-.... .. ..++...|..+...++|.+|-..|..++.
T Consensus 2 ~~~~l~~~g~~~~~~g~~~eAi~~~~~al~~~p--~~-------~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 65 (117)
T d1elwa_ 2 QVNELKEKGNKALSVGNIDDALQCYSEAIKLDP--HN-------HVLYSNRSAAYAKKGDYQKAYEDGCKTVD 65 (117)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TC-------HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHhcCC--cc-------hhhhhcccccccccccccccchhhhhHHH
Confidence 344456778888888888888888887765431 11 23455567777788888888888887764
No 27
>d1p5qa1 a.118.8.1 (A:258-427) FKBP52 (FKBP4), C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.18 E-value=5.5 Score=29.71 Aligned_cols=90 Identities=12% Similarity=0.001 Sum_probs=63.4
Q ss_pred cCCHHHHHHHHhcc-cc-ccccC-------CchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHH
Q psy4458 5 EGDVTEAANIIQEL-QV-ETYGS-------MEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKL 75 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i-~v-et~~~-------~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~ 75 (303)
.|++++|....... .+ ++... ....-+...+...+.+++..|+|..|....+++-..-. .. .
T Consensus 26 ~~~~~~Ai~~y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~nla~~y~k~~~~~~A~~~~~~al~~~p--~~-------~ 96 (170)
T d1p5qa1 26 EGKYKQALLQYKKIVSWLEYESSFSNEEAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDS--NN-------E 96 (170)
T ss_dssp HTCHHHHHHHHHHHHHHTTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TC-------H
T ss_pred cCCHHHHHHHHHHHHHHhhhccccchHHHhhhchhHHHHHHHHHHHHHhhhhcccccchhhhhhhccc--cc-------h
Confidence 57888888766433 11 11111 12234455667788899999999999999998876542 22 3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHc
Q psy4458 76 KYYRLMIELDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 76 ~y~~~~~~~~~~~~~f~eaa~~y~e~~~ 103 (303)
..+..+|..+...++|-+|...|..+..
T Consensus 97 ~a~~~~g~~~~~~g~~~~A~~~~~~al~ 124 (170)
T d1p5qa1 97 KGLSRRGEAHLAVNDFELARADFQKVLQ 124 (170)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 3455689999999999999999999865
No 28
>d1rz4a1 a.4.5.53 (A:132-216) Eukaryotic translation initiation factor 3 subunit 12, eIF3k, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=78.82 E-value=2 Score=29.28 Aligned_cols=40 Identities=18% Similarity=0.203 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHhhhceeeHHHHHHHhCCC-HHHHHHHHHh
Q psy4458 201 HRVVEHNIRVMAKYYTRITLQRMCDLLGLP-IEETEEFLSS 240 (303)
Q Consensus 201 ~~i~ehNi~~isk~Y~~Itl~~la~ll~ls-~~~vE~~l~~ 240 (303)
.+++..-..+++..|.+|+-+.|+++||++ ..+++..+..
T Consensus 5 dsIR~~i~~vv~iTyq~I~~~~L~e~LG~~~d~~L~~~i~~ 45 (85)
T d1rz4a1 5 DSVRKFICHVVGITYQHIDRWLLAEMLGDLSDSQLKVWMSK 45 (85)
T ss_dssp HHHHHHHHHHHHHHCSEECHHHHHHHTTSCCHHHHHHHHHH
T ss_pred HHHHHHHHhheeeeeeEEcHHHHHHHhCCCCHHHHHHHHHH
Confidence 344444457788899999999999999875 5566666543
No 29
>d1lj9a_ a.4.5.28 (A:) Transcriptional regulator SlyA {Enterococcus faecalis [TaxId: 1351]}
Probab=78.40 E-value=10 Score=27.57 Aligned_cols=42 Identities=10% Similarity=0.117 Sum_probs=38.8
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCc
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAG 256 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~g 256 (303)
...++...||+.++++..-+=..+..|+..|-|.-.-|..|+
T Consensus 41 ~~~~t~~~la~~l~i~~~tvs~~l~~L~~~glI~r~~~~~D~ 82 (144)
T d1lj9a_ 41 NPGIIQEKIAELIKVDRTTAARAIKRLEEQGFIYRQEDASNK 82 (144)
T ss_dssp STTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCT
T ss_pred CCCCCHHHHHHHHCccHhhHHHHHHHHHhhhcccccCCCCCC
Confidence 346999999999999999999999999999999998888877
No 30
>d1s3ja_ a.4.5.28 (A:) Putative transcriptional regulator YusO {Bacillus subtilis [TaxId: 1423]}
Probab=77.12 E-value=8.4 Score=27.83 Aligned_cols=43 Identities=2% Similarity=0.022 Sum_probs=39.3
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
+..+|...||+.+++++.-+=..+.+|+..|-+.-..|..++-
T Consensus 47 ~~~~t~~~la~~~~i~~~~vs~~l~~L~~~glv~r~~~~~D~R 89 (143)
T d1s3ja_ 47 HGSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRR 89 (143)
T ss_dssp HSEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTT
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHhhhheeeeecCCCC
Confidence 5679999999999999999999999999999998888877765
No 31
>d2etha1 a.4.5.28 (A:1-140) Putative transcriptional regulator TM0816 {Thermotoga maritima [TaxId: 2336]}
Probab=76.70 E-value=9.6 Score=27.37 Aligned_cols=46 Identities=7% Similarity=0.125 Sum_probs=41.0
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEe
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINF 260 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f 260 (303)
-..+|...||+.+|++..-+=..+..|+..|-+.-.-|..++-..+
T Consensus 44 ~~~~t~~~La~~l~i~~~~vs~~v~~L~~~gli~r~~~~~D~R~~~ 89 (140)
T d2etha1 44 FGPKKMKEIAEFLSTTKSNVTNVVDSLEKRGLVVREMDPVDRRTYR 89 (140)
T ss_dssp HCCBCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEEEECTTTSSCEE
T ss_pred cCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeeeecccccchhh
Confidence 3568999999999999999999999999999999999988875433
No 32
>d1elwa_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=75.55 E-value=10 Score=26.13 Aligned_cols=86 Identities=14% Similarity=0.080 Sum_probs=65.4
Q ss_pred ccCCHHHHHHHHhcc-ccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQEL-QVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i-~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
..|++++|...+... .... .-..++...+-+++..|++..|.....++-..-. +. . ..+...+
T Consensus 15 ~~g~~~eAi~~~~~al~~~p-------~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~~p--~~---~----~~~~~~g 78 (117)
T d1elwa_ 15 SVGNIDDALQCYSEAIKLDP-------HNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP--DW---G----KGYSRKA 78 (117)
T ss_dssp HTTCHHHHHHHHHHHHHHCT-------TCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHCT--TC---H----HHHHHHH
T ss_pred HcCCHHHHHHHHHHHHhcCC-------cchhhhhcccccccccccccccchhhhhHHHhcc--ch---h----hHHHHHH
Confidence 468999999988775 2221 1135778888999999999999999998886542 22 2 2345688
Q ss_pred HHHHHhhhHHHHHHHHHHHHcCC
Q psy4458 83 ELDQHEGSYLATCKHYRAILTTP 105 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~~~t~ 105 (303)
..+...++|.+|-..|..++...
T Consensus 79 ~~~~~~~~~~~A~~~~~~a~~~~ 101 (117)
T d1elwa_ 79 AALEFLNRFEEAKRTYEEGLKHE 101 (117)
T ss_dssp HHHHHTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHccCHHHHHHHHHHHHHhC
Confidence 89999999999999999998654
No 33
>d1hz4a_ a.118.8.2 (A:) Transcription factor MalT domain III {Escherichia coli [TaxId: 562]}
Probab=74.11 E-value=18 Score=28.31 Aligned_cols=102 Identities=9% Similarity=-0.031 Sum_probs=71.2
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|++++|...+...---....-+....+..++.....+...+++..+.....++-.......++ ........+...+.
T Consensus 63 ~~g~~~~A~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~al~~~~~~~~~-~~~~~~~~~~~la~ 141 (366)
T d1hz4a_ 63 CKGELTRSLALMQQTEQMARQHDVWHYALWSLIQQSEILFAQGFLQTAWETQEKAFQLINEQHLE-QLPMHEFLVRIRAQ 141 (366)
T ss_dssp HHTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHTTCT-TSTHHHHHHHHHHH
T ss_pred HCCCHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhcccc-hhhHHHHHHHHHHH
Confidence 45899999998876532111222445667788889999999999999999888876554222221 22233455566788
Q ss_pred HHHHhhhHHHHHHHHHHHHcCCC
Q psy4458 84 LDQHEGSYLATCKHYRAILTTPC 106 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~t~~ 106 (303)
.+...+++..+...|........
T Consensus 142 ~~~~~~~~~~a~~~~~~~~~~~~ 164 (366)
T d1hz4a_ 142 LLWAWARLDEAEASARSGIEVLS 164 (366)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHTT
T ss_pred HHHHhcchhhhHHHHHHHHHHhh
Confidence 88899999999999988876543
No 34
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.47 E-value=10 Score=30.29 Aligned_cols=86 Identities=10% Similarity=-0.018 Sum_probs=63.3
Q ss_pred ccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHH
Q psy4458 4 DEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIE 83 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~ 83 (303)
..|++++|...+..+--.... -.+.+...+.++...|++..|.....++-.... + +. ..+...+.
T Consensus 31 ~~g~~~~A~~~~~~al~~~P~------~~~a~~~lg~~~~~~~~~~~A~~~~~~al~~~p--~---~~----~~~~~la~ 95 (323)
T d1fcha_ 31 QEGDLPNAVLLFEAAVQQDPK------HMEAWQYLGTTQAENEQELLAISALRRCLELKP--D---NQ----TALMALAV 95 (323)
T ss_dssp HTTCHHHHHHHHHHHHHSCTT------CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T---CH----HHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHHhCCC------CHHHHHHHHHHHHHcCChHHHHHHHHhhhcccc--c---cc----cccccccc
Confidence 468999999999875321111 145677789999999999999999999876542 1 22 23444677
Q ss_pred HHHHhhhHHHHHHHHHHHHcC
Q psy4458 84 LDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 84 ~~~~~~~f~eaa~~y~e~~~t 104 (303)
.+...+++.+|...|..+...
T Consensus 96 ~~~~~~~~~~A~~~~~~~~~~ 116 (323)
T d1fcha_ 96 SFTNESLQRQACEILRDWLRY 116 (323)
T ss_dssp HHHHTTCHHHHHHHHHHHHHT
T ss_pred cccccccccccccchhhHHHh
Confidence 888899999999999888754
No 35
>d1lvaa3 a.4.5.35 (A:511-574) C-terminal fragment of elongation factor SelB {Moorella thermoacetica [TaxId: 1525]}
Probab=73.01 E-value=5.5 Score=25.21 Aligned_cols=35 Identities=17% Similarity=0.273 Sum_probs=32.6
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
|.--++..|+..+|+++.+++.++-.++..|.+..
T Consensus 21 ~~PP~vrdl~~~l~~~e~~~~~lL~~l~~~G~lvk 55 (64)
T d1lvaa3 21 WQPPSFKEVAGSFNLDPSELEELLHYLVREGVLVK 55 (64)
T ss_dssp TSCCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCcHHHHHHHhCCCHHHHHHHHHHHHHCCCEEE
Confidence 78899999999999999999999999999998753
No 36
>d1fcha_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Human (Homo sapiens) [TaxId: 9606]}
Probab=72.95 E-value=11 Score=30.09 Aligned_cols=60 Identities=8% Similarity=-0.119 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Q psy4458 34 LILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAIL 102 (303)
Q Consensus 34 ~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~ 102 (303)
.+...+.++...|++..|..+.+++-.... + +. ..+..+|..+...++|.+|-.+|..++
T Consensus 174 ~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--~---~~----~~~~~lg~~~~~~g~~~~A~~~~~~al 233 (323)
T d1fcha_ 174 VQCGLGVLFNLSGEYDKAVDCFTAALSVRP--N---DY----LLWNKLGATLANGNQSEEAVAAYRRAL 233 (323)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T---CH----HHHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred cchhhHHHHHHHHHHhhhhccccccccccc--c---cc----cchhhhhhcccccccchhHHHHHHHHH
Confidence 344455555555666666555555543321 1 11 122334555555555555555555443
No 37
>d3ctaa1 a.4.5.28 (A:5-89) Ta1064 (RFK), N-terminal domain {Thermoplasma acidophilum [TaxId: 2303]}
Probab=72.76 E-value=4.1 Score=27.37 Aligned_cols=62 Identities=18% Similarity=0.321 Sum_probs=46.1
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCChhHHHHHHHHHHHHH
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDPGEILNEWSASLNEL 280 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~i~~l 280 (303)
.+|...||+.+|+++.-+=..|..|...|-+.-..|...-.+.... ...+.+..|...+..+
T Consensus 21 ~lt~~eLa~~l~i~~~~vs~~l~~Le~~GlV~r~~D~R~~~i~LT~--~G~~~l~~~~~~~~rl 82 (85)
T d3ctaa1 21 YLTSSKLADMLGISQQSASRIIIDLEKNGYITRTVTKRGQILNITE--KGLDVLYTEFADLSRI 82 (85)
T ss_dssp ECCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEEETTEEEEEECH--HHHHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeeecccccccceECH--HHHHHHHHHHHHHHHH
Confidence 6899999999999999999999999999999877776444444432 2234555555555444
No 38
>d2fxaa1 a.4.5.28 (A:6-167) Protease production regulatory protein Hpr {Bacillus subtilis [TaxId: 1423]}
Probab=72.67 E-value=6 Score=29.82 Aligned_cols=50 Identities=4% Similarity=-0.068 Sum_probs=38.3
Q ss_pred HHHHhhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 209 RVMAKYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 209 ~~isk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
..+..-+..+|.+.||+.++++..-+=..+.+|+..|-+.-.-|..++-.
T Consensus 47 L~~l~~~~~~t~~~la~~~~l~~~tvs~~i~rL~~~gli~r~~~~~D~R~ 96 (162)
T d2fxaa1 47 LWIAYQLNGASISEIAKFGVMHVSTAFNFSKKLEERGYLRFSKRLNDKRN 96 (162)
T ss_dssp HHHHHHHTSEEHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEECC------
T ss_pred HhhhccCCCcCHHHHHHHHcCCchhhHHHHHHHHHCCCceeecccccCee
Confidence 33333467899999999999999999999999999999988777776654
No 39
>d1w3ba_ a.118.8.1 (A:) O-GlcNAc transferase p110 subunit, OGT {Human (Homo sapiens) [TaxId: 9606]}
Probab=71.84 E-value=21 Score=28.27 Aligned_cols=157 Identities=8% Similarity=-0.065 Sum_probs=91.6
Q ss_pred CccCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHH
Q psy4458 3 EDEGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMI 82 (303)
Q Consensus 3 e~~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~ 82 (303)
...|++++|...+....--.. .....+...+.++...|++..|....+++-.... + +.+ .+...+
T Consensus 214 ~~~~~~~~A~~~~~~~~~~~~------~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~p--~---~~~----~~~~l~ 278 (388)
T d1w3ba_ 214 KEARIFDRAVAAYLRALSLSP------NHAVVHGNLACVYYEQGLIDLAIDTYRRAIELQP--H---FPD----AYCNLA 278 (388)
T ss_dssp HTTTCTTHHHHHHHHHHHHCT------TCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTCS--S---CHH----HHHHHH
T ss_pred hccccHHHHHHHHHHhHHHhh------hHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHhCC--C---CHH----HHHHHH
Confidence 356889999988876542111 1234556778889999999999999988865431 1 222 233467
Q ss_pred HHHHHhhhHHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHHhCCCCchhhHhHHHh-hhhhhcCCchHHHHHHHHhc
Q psy4458 83 ELDQHEGSYLATCKHYRAILTTPCIQSDPVQRHAVLQNVVLYLMLAPYDNEQSDLTHRV-LEDKLLNEIPLYKGLLQWFT 161 (303)
Q Consensus 83 ~~~~~~~~f~eaa~~y~e~~~t~~~~~~~~~~~~~L~~~v~~~iLs~~~~~r~~ll~~l-~~~~~~~~~p~~~~L~~~f~ 161 (303)
..+...+++.+|-..|..+...... +. ........++.-+..+. +=-..+.+. ..+|.. ...+..+..++.
T Consensus 279 ~~~~~~~~~~~A~~~~~~~~~~~~~--~~---~~~~~l~~~~~~~~~~~-~A~~~~~~al~~~p~~--~~~~~~la~~~~ 350 (388)
T d1w3ba_ 279 NALKEKGSVAEAEDCYNTALRLCPT--HA---DSLNNLANIKREQGNIE-EAVRLYRKALEVFPEF--AAAHSNLASVLQ 350 (388)
T ss_dssp HHHHHHSCHHHHHHHHHHHHHHCTT--CH---HHHHHHHHHHHTTTCHH-HHHHHHHHHTTSCTTC--HHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHhhhccCCc--cc---hhhhHHHHHHHHCCCHH-HHHHHHHHHHHhCCCC--HHHHHHHHHHHH
Confidence 8888899999999999888754322 11 11111122222211111 112222232 224432 234556777775
Q ss_pred CCcccCchHHHHHHHHhhccccc
Q psy4458 162 NPELIKWSGLRQLYEEELFKTSV 184 (303)
Q Consensus 162 ~~~li~~~~~~~~~~~~L~~~~~ 184 (303)
... ++.+....|++.|+-+|-
T Consensus 351 ~~g--~~~~A~~~~~~al~l~P~ 371 (388)
T d1w3ba_ 351 QQG--KLQEALMHYKEAIRISPT 371 (388)
T ss_dssp TTT--CCHHHHHHHHHHHTTCTT
T ss_pred HcC--CHHHHHHHHHHHHHhCCC
Confidence 443 567777888888887664
No 40
>d1jhfa1 a.4.5.2 (A:2-72) LexA repressor, N-terminal DNA-binding domain {Escherichia coli [TaxId: 562]}
Probab=70.76 E-value=6.4 Score=25.42 Aligned_cols=43 Identities=21% Similarity=0.210 Sum_probs=35.2
Q ss_pred eeeHHHHHHHhCC-CHHHHHHHHHhhhhcCceEEEecCCCceEE
Q psy4458 217 RITLQRMCDLLGL-PIEETEEFLSSMVVSKTITAKIDRPAGIIN 259 (303)
Q Consensus 217 ~Itl~~la~ll~l-s~~~vE~~l~~mI~~~~l~akIDq~~giV~ 259 (303)
..|+..||+.||+ |+.-|-..|..+...|.|.-.=....++..
T Consensus 24 ~Ps~rei~~~~g~~S~stv~~~l~~Le~kG~I~r~~~~~R~i~i 67 (71)
T d1jhfa1 24 PPTRAEIAQRLGFRSPNAAEEHLKALARKGVIEIVSGASRGIRL 67 (71)
T ss_dssp CCCHHHHHHHTTCSSHHHHHHHHHHHHHTTSEEECSSSSSCEEE
T ss_pred CCCHHHHHHHcCCCCHHHHHHHHHHHHHCcCeecCCCCCceeEe
Confidence 4899999999999 899999999999999988764444455443
No 41
>d1lnwa_ a.4.5.28 (A:) MexR repressor {Pseudomonas aeruginosa [TaxId: 287]}
Probab=70.36 E-value=14 Score=26.47 Aligned_cols=44 Identities=5% Similarity=-0.064 Sum_probs=40.0
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
.+.-++.+.||+.++++..-+-..+-.|+..|-+.-.-|..++-
T Consensus 47 ~~~~~t~~~la~~l~~~~~~vsr~l~~L~~~G~v~r~~~~~D~R 90 (141)
T d1lnwa_ 47 EQRGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQR 90 (141)
T ss_dssp SSTTCBHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSSSS
T ss_pred HCCCCCHHHHHHHHCccHhHHHHHHHHHHHhhceeeeccCCCCc
Confidence 36679999999999999999999999999999998888877774
No 42
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=69.90 E-value=18 Score=26.48 Aligned_cols=91 Identities=12% Similarity=0.046 Sum_probs=61.5
Q ss_pred cCCHHHHHHHHhcc-c-cccccCCchH-------HHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHH
Q psy4458 5 EGDVTEAANIIQEL-Q-VETYGSMEKK-------EKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKL 75 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i-~-vet~~~~~~~-------~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~ 75 (303)
.|++.+|.+..... . ++....++.. -...+++..+..++..++|..|-...+++-.... .. . +.
T Consensus 28 ~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai~~~~~al~l~p--~~---~--~a 100 (168)
T d1kt1a1 28 GGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAVECCDKALGLDS--AN---E--KG 100 (168)
T ss_dssp TTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--TC---H--HH
T ss_pred cCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccchhhhhhhhhccc--ch---H--HH
Confidence 58888888876442 1 1111222222 2445566677888999999999999999876532 22 2 22
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 76 KYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 76 ~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
+...+..+...++|-+|-.+|..++..
T Consensus 101 --~~~~~~~~~~l~~~~~A~~~~~~al~l 127 (168)
T d1kt1a1 101 --LYRRGEAQLLMNEFESAKGDFEKVLEV 127 (168)
T ss_dssp --HHHHHHHHHHTTCHHHHHHHHHHHHHS
T ss_pred --HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 334778889999999999999998754
No 43
>d1p4xa2 a.4.5.28 (A:126-250) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=66.43 E-value=6.5 Score=28.22 Aligned_cols=44 Identities=7% Similarity=0.013 Sum_probs=39.7
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
-..+++..||+.+|++...+=..+.+|...|-+.-+-|..|+-.
T Consensus 47 ~~~~~~~~ia~~l~~~~~~vs~~v~~L~~~glV~r~~~~~D~R~ 90 (125)
T d1p4xa2 47 KNIVLLKDLIETIHHKYPQTVRALNNLKKQGYLIKERSTEDERK 90 (125)
T ss_dssp TCCEEHHHHHHHSSSCHHHHHHHHHHHHHHTSSEEEECSSSTTC
T ss_pred CCCccHHHHHHHHCCCcchHHHHHHHHHhccCEeeeecCCCCCe
Confidence 35799999999999999999999999999999988888887753
No 44
>d2d1ha1 a.4.5.50 (A:1-109) Hypothetical transcriptional regulator ST1889 {Sulfolobus tokodaii [TaxId: 111955]}
Probab=66.34 E-value=17 Score=24.89 Aligned_cols=40 Identities=15% Similarity=0.200 Sum_probs=32.8
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCC
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPA 255 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~ 255 (303)
..+|.+.||+.+|+++.-+-..+.+|...|-|.-.-+..+
T Consensus 35 ~~~t~~eLa~~~~i~~~tvs~~l~~L~~~GlV~r~~~~~d 74 (109)
T d2d1ha1 35 KPITSEELADIFKLSKTTVENSLKKLIELGLVVRTKTEGK 74 (109)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEC---
T ss_pred CCCCHHHHHHHHCccHhHHHHHHHHHHHCCCEEEeecCCC
Confidence 4589999999999999999999999999998865444443
No 45
>d1l0oc_ a.4.13.2 (C:) SigmaF {Bacillus stearothermophilus [TaxId: 1422]}
Probab=65.89 E-value=11 Score=23.07 Aligned_cols=26 Identities=19% Similarity=0.134 Sum_probs=21.7
Q ss_pred hhhceeeHHHHHHHhCCCHHHHHHHH
Q psy4458 213 KYYTRITLQRMCDLLGLPIEETEEFL 238 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~vE~~l 238 (303)
+.=..-|.+.||+.+|+|++++...+
T Consensus 27 ~lgRePT~~EiA~~l~~~~e~V~~~l 52 (57)
T d1l0oc_ 27 TRGRAPTVTEIADHLGISPEDVVLAQ 52 (57)
T ss_dssp HHTSCCBHHHHHHHHTSCHHHHHHHH
T ss_pred HcCCCCCHHHHHHHHCcCHHHHHHHH
Confidence 44567799999999999999997654
No 46
>d1s6la1 a.4.5.79 (A:21-80) Alkylmercury lyase MerB {Escherichia coli [TaxId: 562]}
Probab=65.85 E-value=2 Score=27.07 Aligned_cols=28 Identities=14% Similarity=0.291 Sum_probs=25.4
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhh
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVV 243 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~ 243 (303)
.-||.+.||..+|.|+++++..+..|-.
T Consensus 15 ~PVs~~~LA~alg~~~~eV~~aL~~~p~ 42 (60)
T d1s6la1 15 RPVSRTTLAGILDWPAERVAAVLEQATS 42 (60)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHTTCCS
T ss_pred CCcCHHHHHHHhCCCHHHHHHHHHhCCC
Confidence 4589999999999999999999999874
No 47
>d1hxia_ a.118.8.1 (A:) Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) {Trypanosoma brucei [TaxId: 5691]}
Probab=64.94 E-value=17 Score=24.58 Aligned_cols=61 Identities=8% Similarity=-0.082 Sum_probs=48.6
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 35 ILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 35 ~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
.+..+..++..|++..|....+++-.... .. ...+..+|..+...++|.+|-.+|..++.-
T Consensus 19 ~~~~g~~~~~~g~~~~A~~~~~~al~~~p--~~-------~~a~~~lg~~~~~~~~~~~A~~~~~~al~~ 79 (112)
T d1hxia_ 19 PMEEGLSMLKLANLAEAALAFEAVCQKEP--ER-------EEAWRSLGLTQAENEKDGLAIIALNHARML 79 (112)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHST--TC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhHHHHHHHhhhccccc--cc-------chhhhhhhhhhhhhhhHHHhhccccccccc
Confidence 36778889999999999999999876542 12 244556888999999999999999988753
No 48
>d2fbia1 a.4.5.28 (A:5-140) Probable transcriptional regulator PA4135 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=63.82 E-value=21 Score=25.21 Aligned_cols=44 Identities=2% Similarity=-0.102 Sum_probs=40.6
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
.-.++...||+.++++..-+=..+..|+..|-|.-.-|..|+-+
T Consensus 42 ~~~~t~~~la~~~~i~~~~vs~~i~~L~~~gli~r~~~~~D~R~ 85 (136)
T d2fbia1 42 QGEMESYQLANQACILRPSMTGVLARLERDGIVRRWKAPKDQRR 85 (136)
T ss_dssp HCSEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEEETTEEEE
T ss_pred cCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEeecCccCch
Confidence 56799999999999999999999999999999999999998753
No 49
>d1kt1a1 a.118.8.1 (A:254-421) FKBP51, C-terminal domain {Monkey (Saimiri boliviensis) [TaxId: 27679]}
Probab=63.79 E-value=23 Score=25.70 Aligned_cols=79 Identities=15% Similarity=0.129 Sum_probs=53.8
Q ss_pred CCchHHHH---HHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCc------chHHHHHHHHHHHHHHHHHhhhHHHHH
Q psy4458 25 SMEKKEKV---TLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKD------DVQELKLKYYRLMIELDQHEGSYLATC 95 (303)
Q Consensus 25 ~~~~~~k~---~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~------~~~e~k~~y~~~~~~~~~~~~~f~eaa 95 (303)
.|+..|++ +.+.+.+..++..|+|..|-..-+++-..+....+. ....+...++.-++..+...++|.+|-
T Consensus 5 ~m~~~E~~~~a~~~~e~G~~~~~~~~~~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Ai 84 (168)
T d1kt1a1 5 EMDTKEKLEQAAIVKEKGTVYFKGGKYVQAVIQYGKIVSWLEMEYGLSEKESKASESFLLAAFLNLAMCYLKLREYTKAV 84 (168)
T ss_dssp GSCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHTTCCSCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhhccchhhhhhcchhHHHHHHhHHHHHHHhhhcccch
Confidence 36667665 667778888999999999998888876544222110 123334444545677777888888888
Q ss_pred HHHHHHHc
Q psy4458 96 KHYRAILT 103 (303)
Q Consensus 96 ~~y~e~~~ 103 (303)
..|..++.
T Consensus 85 ~~~~~al~ 92 (168)
T d1kt1a1 85 ECCDKALG 92 (168)
T ss_dssp HHHHHHHH
T ss_pred hhhhhhhh
Confidence 88888764
No 50
>d1ylfa1 a.4.5.55 (A:5-142) Hypothetical protein BC1842 {Bacillus cereus [TaxId: 1396]}
Probab=63.43 E-value=3.2 Score=30.41 Aligned_cols=44 Identities=9% Similarity=-0.036 Sum_probs=36.0
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
+=+.++.+.||+.+|+|+..+++++..+...|-+.++=-. .|..
T Consensus 20 ~~~~vss~~IA~~~~i~~~~l~kil~~L~~aGlv~S~rG~-GG~~ 63 (138)
T d1ylfa1 20 PSSLCTSDYMAESVNTNPVVIRKIMSYLKQAGFVYVNRGP-GGAG 63 (138)
T ss_dssp CGGGCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC----CCEE
T ss_pred CCCcCcHHHHHHHHCcCHHHHHHHHHHHHHCCCeEeecCC-CCce
Confidence 3456899999999999999999999999999999876553 6654
No 51
>d1jgsa_ a.4.5.28 (A:) Multiple antibiotic resistance repressor, MarR {Escherichia coli [TaxId: 562]}
Probab=63.29 E-value=9.4 Score=27.45 Aligned_cols=44 Identities=11% Similarity=0.044 Sum_probs=39.9
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
...+|.+.||+.++++..-+-..+.+|...|-+.-+-|..+|-.
T Consensus 46 ~~~~t~~ela~~~~i~~~~vs~~v~~L~~~glv~r~~~~~D~R~ 89 (138)
T d1jgsa_ 46 AACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRG 89 (138)
T ss_dssp HSSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSC
T ss_pred CcCCCHHHHHHHHCCCHhHHHHHHHHHhhCCCEEEeeccCCCCe
Confidence 45799999999999999999999999999999988888887753
No 52
>d3deua1 a.4.5.28 (A:2-141) Transcriptional regulator SlyA {Salmonella typhimurium [TaxId: 90371]}
Probab=63.09 E-value=13 Score=26.45 Aligned_cols=46 Identities=9% Similarity=0.084 Sum_probs=35.6
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCc---eEEecc
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAG---IINFAR 262 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~g---iV~f~~ 262 (303)
.+|...||+.++++..-+-..|..|+..|-+.-+-|..++ .|....
T Consensus 46 ~~t~~~la~~l~i~~~~vs~~l~~L~~~glI~~~~~~~D~R~~~l~lT~ 94 (140)
T d3deua1 46 DQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTE 94 (140)
T ss_dssp SEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECG
T ss_pred CccHHHHHHHHCCCHhHHHHHHHHHHhCCCEEecccCCCCCceeeEECH
Confidence 6999999999999999999999999999999888888887 455443
No 53
>d2c2la1 a.118.8.1 (A:24-224) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=61.86 E-value=26 Score=25.49 Aligned_cols=61 Identities=13% Similarity=-0.037 Sum_probs=48.8
Q ss_pred HHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 35 ILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 35 ~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
+-++...++..|||..|....+++-.... .. ..++...|..|...++|.+|-.+|..++..
T Consensus 7 l~~~Gn~~~~~g~~~~Ai~~~~kal~~~p--~~-------~~~~~~lg~~y~~~~~~~~Ai~~~~~al~l 67 (201)
T d2c2la1 7 LKEQGNRLFVGRKYPEAAACYGRAITRNP--LV-------AVYYTNRALCYLKMQQPEQALADCRRALEL 67 (201)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHCS--CC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHhCC--CC-------HHHHHhHHHHHhhhhhhhhhhHHHHHHHHh
Confidence 34678889999999999999999876542 11 245556789999999999999999999754
No 54
>d2bv6a1 a.4.5.28 (A:5-140) Transcriptional regulator MgrA {Staphylococcus aureus [TaxId: 1280]}
Probab=61.73 E-value=8.7 Score=27.55 Aligned_cols=44 Identities=11% Similarity=0.095 Sum_probs=40.0
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
....+|.+.||+.+|++...+-..+..|+..|-+.-+-|..++-
T Consensus 45 ~~~~~t~~~la~~l~~~~~~~s~~l~~L~~~Gli~r~~~~~D~R 88 (136)
T d2bv6a1 45 DESPVNVKKVVTELALDTGTVSPLLKRMEQVDLIKRERSEVDQR 88 (136)
T ss_dssp HSSEEEHHHHHHHTTCCTTTHHHHHHHHHHTTSEEEEECSSSTT
T ss_pred cCCCCCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEEeecCCccc
Confidence 35689999999999999999999999999999998888888774
No 55
>d1mkma1 a.4.5.33 (A:1-75) Transcriptional regulator IclR, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=59.90 E-value=7.5 Score=25.19 Aligned_cols=35 Identities=0% Similarity=0.172 Sum_probs=32.1
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
=..++++.||+.+|+|..-+-+.+..|...|-+.-
T Consensus 18 ~~~~s~~eia~~~~~~~st~~rll~tL~~~g~l~~ 52 (75)
T d1mkma1 18 PGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLR 52 (75)
T ss_dssp SSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 35699999999999999999999999999998863
No 56
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=59.02 E-value=15 Score=25.74 Aligned_cols=54 Identities=13% Similarity=0.119 Sum_probs=42.2
Q ss_pred cCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhc
Q psy4458 5 EGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKF 62 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~ 62 (303)
.|++.+|..+|..+- ..-+...+.+.+...+..|...|||..|..+.+++-..-
T Consensus 49 ~~d~~~Ai~~l~~~l----~~~~~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~~ 102 (122)
T d1nzna_ 49 NDDIRKGIVLLEELL----PKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTE 102 (122)
T ss_dssp HHHHHHHHHHHHHHT----TTSCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred hHHHHHHHHHHHHHH----hccCCchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHhC
Confidence 467778888887742 111345677888999999999999999999999997754
No 57
>d2hr3a1 a.4.5.28 (A:2-146) Probable transcriptional regulator PA3067 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=58.76 E-value=21 Score=25.50 Aligned_cols=42 Identities=12% Similarity=0.113 Sum_probs=33.7
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
..+|...||+.+|++..-+-..+..|+..|-+.-.-|..++-
T Consensus 48 g~~t~~~La~~~~~~~~~vs~~i~~L~~~glv~r~~~~~DrR 89 (145)
T d2hr3a1 48 GDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGR 89 (145)
T ss_dssp SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------
T ss_pred CCCCHHHHHHHHCCCHHHHHHHHHHHHHcCCeEeeeCccchh
Confidence 469999999999999999999999999999997776655544
No 58
>d1zyba1 a.4.5.4 (A:148-220) Probable transcription regulator BT4300, C-terminal domain {Bacteroides thetaiotaomicron [TaxId: 818]}
Probab=57.05 E-value=6.5 Score=25.45 Aligned_cols=41 Identities=10% Similarity=0.058 Sum_probs=33.5
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEec
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFA 261 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~ 261 (303)
.+|-+.||..+|+|.+-+-..+.+|-.+|-|.. ..|.|...
T Consensus 27 ~lt~~elA~~lg~sr~tvsr~l~~l~~~g~I~~----~~~~i~I~ 67 (73)
T d1zyba1 27 KVKMDDLARCLDDTRLNISKTLNELQDNGLIEL----HRKEILIP 67 (73)
T ss_dssp ECCHHHHHHHHTSCHHHHHHHHHHHHHTTSCEE----ETTEEEES
T ss_pred ecCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe----cCCEEEEc
Confidence 468899999999999999999999999998752 44445443
No 59
>d2ev0a1 a.4.5.24 (A:2-62) Manganese transport regulator MntR {Bacillus subtilis [TaxId: 1423]}
Probab=55.24 E-value=11 Score=23.51 Aligned_cols=33 Identities=3% Similarity=0.106 Sum_probs=29.8
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
..++...||+.||+++.-|=..+-+|...|-+.
T Consensus 20 ~~v~~~~iA~~L~vs~~SVs~mikrL~~~GlV~ 52 (61)
T d2ev0a1 20 GYARVSDIAEALAVHPSSVTKMVQKLDKDEYLI 52 (61)
T ss_dssp SSCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCccHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 468999999999999999999999999998764
No 60
>d1p4xa1 a.4.5.28 (A:1-125) Staphylococcal accessory regulator A homolog, SarS {Staphylococcus aureus [TaxId: 1280]}
Probab=54.96 E-value=19 Score=25.40 Aligned_cols=42 Identities=7% Similarity=0.095 Sum_probs=37.2
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
..+|+..||+.++++...+=..+..|...|-|.-.-|..++-
T Consensus 49 ~~~t~~eia~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~R 90 (125)
T d1p4xa1 49 NTLPFKKIVSDLCYKQSDLVQHIKVLVKHSYISKVRSKIDER 90 (125)
T ss_dssp SEEEHHHHHHHSSSCGGGTHHHHHHHHHTTSCEEEECSSSTT
T ss_pred CCcCHHHHHHHhCCCcchHHHHHHHHHHCCCceeecccCCCC
Confidence 469999999999999999999999999999997777666553
No 61
>d3e5ua1 a.4.5.4 (A:148-227) Chlorophenol reduction protein CprK {Desulfitobacterium hafniense [TaxId: 49338]}
Probab=54.67 E-value=6.5 Score=25.66 Aligned_cols=32 Identities=9% Similarity=0.223 Sum_probs=29.2
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
.+|-+.||.++|+|.+-+=+.+.+|-.+|-|.
T Consensus 30 ~lt~~elA~~~g~sretvsr~l~~l~~~glI~ 61 (80)
T d3e5ua1 30 PLSQKSIGEITGVHHVTVSRVLASLKRENILD 61 (80)
T ss_dssp CCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCcEE
Confidence 46779999999999999999999999999774
No 62
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=54.60 E-value=7.3 Score=24.75 Aligned_cols=31 Identities=6% Similarity=0.209 Sum_probs=22.6
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
|++-=+..+. +-|..+|++.||+..|+|..-
T Consensus 8 Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t 39 (73)
T d1t56a1 8 ILATAENLLEDRPLADISVDDLAKGAGISRPT 39 (73)
T ss_dssp HHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHhCcccCCHHHHHHHhCCCHHH
Confidence 4443334443 559999999999999999653
No 63
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=54.58 E-value=7.2 Score=24.74 Aligned_cols=35 Identities=11% Similarity=0.122 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 200 KHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 200 ~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
+.+|++--+..+. +.|..+|++.||+..|+|+.-+
T Consensus 3 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~~ 38 (71)
T d1jt6a1 3 KDKILGVAKELFIKNGYNATTTGEIVKLSESSKGNL 38 (71)
T ss_dssp HHHHHHHHHHHHHHHCTTTCCHHHHHHHTTCCHHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCcCHhHH
Confidence 3445555555554 5699999999999999997643
No 64
>d2frha1 a.4.5.28 (A:102-216) Pleiotropic regulator of virulence genes, SarA {Staphylococcus aureus [TaxId: 1280]}
Probab=54.44 E-value=11 Score=26.37 Aligned_cols=43 Identities=7% Similarity=0.009 Sum_probs=38.5
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
=..+|+..||+.++++..-+=..+..|...|-+.-.-|..++-
T Consensus 47 ~~~~t~~~la~~l~~~~~tvs~~i~~Le~~gli~r~~~~~D~R 89 (115)
T d2frha1 47 EKEYYLKDIINHLNYKQPQVVKAVKILSQEDYFDKKRNEHDER 89 (115)
T ss_dssp CSEEEHHHHHHHSSSHHHHHHHHHHHHHHTTSSCCBCCSSSSC
T ss_pred CCCCCHHHHHHHHCCCHhHHHHHHHHHHhhhhheeeecccCCc
Confidence 3459999999999999999999999999999998887777765
No 65
>d3bwga1 a.4.5.6 (A:5-82) Transcriptional regulator YydK {Bacillus subtilis [TaxId: 1423]}
Probab=53.93 E-value=17 Score=23.48 Aligned_cols=46 Identities=13% Similarity=0.127 Sum_probs=39.2
Q ss_pred hhhcee-eHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEe
Q psy4458 213 KYYTRI-TLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINF 260 (303)
Q Consensus 213 k~Y~~I-tl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f 260 (303)
++=..+ +...||+.+|+|..-|-+.+..+..+|-|..+ +..|+..-
T Consensus 17 ~~G~~LPse~~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~g~G~~V~ 63 (78)
T d3bwga1 17 QQGDKLPVLETLMAQFEVSKSTITKSLELLEQKGAIFQV--RGSGIFVR 63 (78)
T ss_dssp CTTCBCCCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEE--TTTEEEEC
T ss_pred CCcCCCcCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE--cCcEEEEc
Confidence 567789 89999999999999999999999999999865 55566543
No 66
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=53.66 E-value=34 Score=24.35 Aligned_cols=91 Identities=11% Similarity=0.009 Sum_probs=61.3
Q ss_pred cCCHHHHHHHHhcc-cccc-ccCC-ch-------HHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHH
Q psy4458 5 EGDVTEAANIIQEL-QVET-YGSM-EK-------KEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELK 74 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i-~vet-~~~~-~~-------~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k 74 (303)
+|++.+|....... ..-. .... +. .-++..++..+..++..++|..|-....++-..- ... .
T Consensus 30 ~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~Al~~~~~al~~~--p~~-----~- 101 (153)
T d2fbna1 30 KNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKAIDHASKVLKID--KNN-----V- 101 (153)
T ss_dssp TTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHS--TTC-----H-
T ss_pred cCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchhhhhhhcccccc--chh-----h-
Confidence 57888888766542 1111 1111 11 1234566778899999999999999998886433 222 2
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 75 LKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 75 ~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
+-+..+|..+...++|.+|-.+|..+...
T Consensus 102 -ka~~~~g~~~~~lg~~~~A~~~~~~al~l 130 (153)
T d2fbna1 102 -KALYKLGVANMYFGFLEEAKENLYKAASL 130 (153)
T ss_dssp -HHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred -hhhHHhHHHHHHcCCHHHHHHHHHHHHHh
Confidence 23445899999999999999999998754
No 67
>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=53.10 E-value=13 Score=24.29 Aligned_cols=35 Identities=11% Similarity=0.356 Sum_probs=26.4
Q ss_pred hceeeHHHHHHHh-----------CCCHHHHHHHHHhhhhcCceEE
Q psy4458 215 YTRITLQRMCDLL-----------GLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 215 Y~~Itl~~la~ll-----------~ls~~~vE~~l~~mI~~~~l~a 249 (303)
+.++.++||...+ +.|.++++..+..+|.+|+|.+
T Consensus 20 ~~slpleRIh~mLkmfv~~~~~~~~~t~~eL~~FL~~~V~e~kL~~ 65 (74)
T d1ldda_ 20 LGAMKLHKIHSFLKITVPKDWGYNRITLQQLEGYLNTLADEGRLKY 65 (74)
T ss_dssp HCSEEHHHHHHHHHHHSCGGGCCTTCCHHHHHHHHHHHHHTTSEEC
T ss_pred CCCCCHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHhcCceEE
Confidence 4566666666555 3466899999999999999854
No 68
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=52.94 E-value=12 Score=23.41 Aligned_cols=36 Identities=11% Similarity=0.154 Sum_probs=27.2
Q ss_pred HHHHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 198 MLKHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 198 ~l~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
..+.+|++-=+..+. +-|..+|+..||+..|+|..-
T Consensus 6 ~~r~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~ 42 (68)
T d2id3a1 6 RIREAVLLAAGDALAADGFDALDLGEIARRAGVGKTT 42 (68)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHH
Confidence 345566665556555 459999999999999999653
No 69
>d1i5za1 a.4.5.4 (A:138-206) Catabolite gene activator protein (CAP), C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=52.61 E-value=9.8 Score=23.99 Aligned_cols=32 Identities=22% Similarity=0.306 Sum_probs=29.7
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
.+|=+.||..+|+|.+-+=+.+.+|-.+|.|.
T Consensus 29 ~lt~~~lA~~~G~sRetvsr~L~~l~~~glI~ 60 (69)
T d1i5za1 29 KITRQEIGQIVGCSRETVGRILKMLEDQNLIS 60 (69)
T ss_dssp ECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 47889999999999999999999999999875
No 70
>d2isya1 a.4.5.24 (A:2-64) Iron-dependent regulator IdeR {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=51.75 E-value=14 Score=23.19 Aligned_cols=34 Identities=12% Similarity=0.004 Sum_probs=30.5
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
=..++...||+.||++++-|=..+-+|-..|-+.
T Consensus 21 ~~~v~~~~iA~~L~vs~~SVt~mvkrL~~~Glv~ 54 (63)
T d2isya1 21 GVTPLRARIAERLDQSGPTVSQTVSRMERDGLLR 54 (63)
T ss_dssp TCCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCCcHHHHHHHhCCCchhHHHHHHHHHHCCCEE
Confidence 4568999999999999999999999999998775
No 71
>d1ku9a_ a.4.5.36 (A:) DNA-binding protein Mj223 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=51.38 E-value=37 Score=24.08 Aligned_cols=46 Identities=7% Similarity=0.003 Sum_probs=38.7
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEec
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFA 261 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~ 261 (303)
..+|++.||+.+|+|..-+=..+..|...|-+.-.-+..++--.|.
T Consensus 40 ~plt~~ela~~l~vsk~~vs~~l~~L~~~GlV~r~~~~~drr~~~~ 85 (151)
T d1ku9a_ 40 KPLTISDIMEELKISKGNVSMSLKKLEELGFVRKVWIKGERKNYYE 85 (151)
T ss_dssp SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECCTTCSSCEEE
T ss_pred CCcCHHHHHHHhCCCcchHHHHHHHHHHCCCEEEEEcCCCCceeEE
Confidence 3599999999999999999999999999999987766665543443
No 72
>d1ihga1 a.118.8.1 (A:197-365) Cyclophilin 40 {Cow (Bos taurus) [TaxId: 9913]}
Probab=50.62 E-value=39 Score=24.21 Aligned_cols=66 Identities=9% Similarity=-0.135 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 30 EKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 30 ~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
.....+...+.+++..|+|..|-...+++-..- .+. ..-+..+|..+...++|.+|-..|..++..
T Consensus 75 ~~~~~~~nla~~~~~~~~~~~Ai~~~~~al~~~--p~~-------~~a~~~~g~~~~~l~~~~~A~~~~~~al~l 140 (169)
T d1ihga1 75 VALSCVLNIGACKLKMSDWQGAVDSCLEALEID--PSN-------TKALYRRAQGWQGLKEYDQALADLKKAQEI 140 (169)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC--TTC-------HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhhcccchhhhhhhhhhhhh--hhh-------hhHHHhHHHHHHHccCHHHHHHHHHHHHHh
Confidence 455667788999999999999999999986543 111 123455899999999999999999998764
No 73
>d1z91a1 a.4.5.28 (A:8-144) Organic hydroperoxide resistance transcriptional regulator OhrR {Bacillus subtilis [TaxId: 1423]}
Probab=50.33 E-value=13 Score=26.45 Aligned_cols=43 Identities=21% Similarity=0.147 Sum_probs=38.6
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
...+|.+.||+.++++..-+=..+-.|+..|-+.-.-|..++-
T Consensus 45 ~~~~t~~~La~~~~i~~~~vsr~i~~L~~~glv~r~~~~~D~R 87 (137)
T d1z91a1 45 HETLTVKKMGEQLYLDSGTLTPMLKRMEQQGLITRKRSEEDER 87 (137)
T ss_dssp HSEEEHHHHHHTTTCCHHHHHHHHHHHHHHTSEECCBCSSCTT
T ss_pred CCCCCHHHHHHHHCcCHHHHHHHHHHHhhccceEEeecCCCCC
Confidence 6799999999999999999999999999999998877766543
No 74
>d2zcwa1 a.4.5.4 (A:118-199) Transcriptional regulator TTHA1359, C-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=49.71 E-value=11 Score=24.60 Aligned_cols=34 Identities=12% Similarity=0.174 Sum_probs=31.0
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
-.+|-+.||+.+|+|.+-+=+.+..+..+|-|.-
T Consensus 28 i~lt~~elA~~lg~sr~tv~r~L~~l~~~gli~~ 61 (82)
T d2zcwa1 28 LKATHDELAAAVGSVRETVTKVIGELAREGYIRS 61 (82)
T ss_dssp EECCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred ecCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe
Confidence 3578999999999999999999999999998864
No 75
>d1nd9a_ a.6.1.6 (A:) N-terminal subdomain of bacterial translation initiation factor IF2 {Escherichia coli [TaxId: 562]}
Probab=49.67 E-value=6.8 Score=23.58 Aligned_cols=28 Identities=11% Similarity=0.210 Sum_probs=21.7
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCc
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKT 246 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~ 246 (303)
+.+|++.+|..+|+|++. ++.+|-.-|-
T Consensus 1 sdvTVk~lA~~v~~~vd~---Ll~Ql~~AGl 28 (49)
T d1nd9a_ 1 TDVTIKTLAAERQTSVER---LVQQFADAGI 28 (49)
T ss_dssp CEECTTHHHHHHSSSHHH---HHHHHHHHTS
T ss_pred CcccHHHHHHHHCcCHHH---HHHHHHHcCC
Confidence 568999999999999876 4556666663
No 76
>d1rp3a1 a.4.13.1 (A:87-163) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=49.65 E-value=22 Score=22.73 Aligned_cols=28 Identities=25% Similarity=0.192 Sum_probs=24.0
Q ss_pred hhhceeeHHHHHHHhCCCHHHHHHHHHh
Q psy4458 213 KYYTRITLQRMCDLLGLPIEETEEFLSS 240 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~vE~~l~~ 240 (303)
+.=..-|.+.||+.+|+|++++.+.+..
T Consensus 22 ~lGR~Pt~~EiA~~lg~s~~e~~~~l~~ 49 (77)
T d1rp3a1 22 KLGREPTDEEVAKELGISTEELFKTLDK 49 (77)
T ss_dssp HHSSCCCHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHCcCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 4477889999999999999999987654
No 77
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=49.46 E-value=13 Score=23.07 Aligned_cols=33 Identities=12% Similarity=0.203 Sum_probs=30.4
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
-+|-.+||+.+|+|..-+-..+.+|+..|-+.-
T Consensus 12 pisr~eLa~~~gls~~TVs~~v~~L~~~GlV~e 44 (62)
T d2hoea1 12 PVSRVELAEELGLTKTTVGEIAKIFLEKGIVVE 44 (62)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEE
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEE
Confidence 388999999999999999999999999998854
No 78
>d1rp3a2 a.4.13.2 (A:164-234) Sigma factor sigma-28 (FliA) {Aquifex aeolicus [TaxId: 63363]}
Probab=48.98 E-value=9.3 Score=23.98 Aligned_cols=30 Identities=7% Similarity=0.337 Sum_probs=25.8
Q ss_pred hhhceeeHHHHHHHhCCCHHHHHHHHHhhh
Q psy4458 213 KYYTRITLQRMCDLLGLPIEETEEFLSSMV 242 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~vE~~l~~mI 242 (303)
.+|...|.+.+|+.+|+|+.-|...+.+..
T Consensus 33 ~~~~~~s~~eIA~~lgis~~tv~~~~~ra~ 62 (71)
T d1rp3a2 33 IFYEELPAKEVAKILETSVSRVSQLKAKAL 62 (71)
T ss_dssp HHTSCCCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHhHhCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 468999999999999999999888776643
No 79
>d1xd7a_ a.4.5.55 (A:) Hypothetical protein ywnA {Bacillus subtilis [TaxId: 1423]}
Probab=48.86 E-value=9.4 Score=27.24 Aligned_cols=42 Identities=10% Similarity=0.151 Sum_probs=36.9
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
..+|-+.||+.+|+|+..+.+++..|-..|-+.++=-...|.
T Consensus 17 ~~~ss~~IA~~~~~~~~~v~kIl~~L~~aglV~s~rG~~GGy 58 (127)
T d1xd7a_ 17 EKTSSEIIADSVNTNPVVVRRMISLLKKADILTSRAGVPGAS 58 (127)
T ss_dssp SCCCHHHHHHHHTSCHHHHHHHHHHHHHTTSEECCSSSSSCE
T ss_pred CCCCHHHHHHHhCcCHHHHHHHHHHHHHhCcccccCCCCCcc
Confidence 358999999999999999999999999999998877765554
No 80
>d1ui5a1 a.4.1.9 (A:5-75) A-factor receptor homolog CprB {Streptomyces coelicolor [TaxId: 1902]}
Probab=48.82 E-value=9.7 Score=24.11 Aligned_cols=33 Identities=12% Similarity=0.231 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
.+|++.=+..+. +.|..+|+..||+..|+|+.-
T Consensus 8 ~~il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~ 41 (71)
T d1ui5a1 8 ATIIGAAADLFDRRGYESTTLSEIVAHAGVTKGA 41 (71)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHHCcCHhH
Confidence 345555555554 569999999999999999754
No 81
>d2hs5a1 a.4.5.6 (A:25-93) Putative transcriptional regulator RHA1_ro03477 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=48.79 E-value=27 Score=21.83 Aligned_cols=44 Identities=11% Similarity=0.291 Sum_probs=36.6
Q ss_pred hhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 213 KYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
+|=..++-..||+.+|+|..-|-+-+..+..+|-|..+ +..|..
T Consensus 21 ~~G~~l~~~~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~~~G~~ 64 (69)
T d2hs5a1 21 RPGARLSEPDICAALDVSRNTVREAFQILIEDRLVAHE--LNRGVF 64 (69)
T ss_dssp CTTCEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE--TTTEEE
T ss_pred CCcCccCHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE--cCCEEE
Confidence 45567888999999999999999999999999998776 334543
No 82
>d2a61a1 a.4.5.28 (A:5-143) Transcriptional regulator TM0710 {Thermotoga maritima [TaxId: 2336]}
Probab=48.53 E-value=40 Score=23.68 Aligned_cols=47 Identities=11% Similarity=0.082 Sum_probs=38.3
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCC---ceEEec
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPA---GIINFA 261 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~---giV~f~ 261 (303)
.-.+|.+.||+.+|++..-+=..+..|+..|-+.=.-+..| ..|...
T Consensus 42 ~~~~t~~~la~~l~i~~~tvs~~l~~L~~~gli~r~~~~~D~R~~~i~LT 91 (139)
T d2a61a1 42 EGPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVIT 91 (139)
T ss_dssp HCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEEC
T ss_pred cCCCCHHHHHHHhCCCcccchHHHHHHHhcCeeeeeeccCCCCeEEEEEC
Confidence 45789999999999999999999999999998765555444 445554
No 83
>d2hr2a1 a.118.8.8 (A:2-157) Hypothetical protein CT2138 {Chlorobium tepidum [TaxId: 1097]}
Probab=48.52 E-value=41 Score=23.81 Aligned_cols=97 Identities=9% Similarity=-0.048 Sum_probs=62.1
Q ss_pred cCCHHHHHHHHhcc-------ccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhcc---CCCCcchHHHH
Q psy4458 5 EGDVTEAANIIQEL-------QVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKFF---DDEKDDVQELK 74 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i-------~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~---~~~~~~~~e~k 74 (303)
.|++++|....... +- ....-........+..++..+...|+|..|.....++..... ....+ .....
T Consensus 22 ~g~y~~Ai~~y~~Al~i~~~~~~-~~~~~~~~~~a~~~~nlg~~~~~lg~~~~A~~~~~~al~~~~~~~~~~~~-~~~~~ 99 (156)
T d2hr2a1 22 AGEYDEAAANCRRAMEISHTMPP-EEAFDHAGFDAFCHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQD-EGKLW 99 (156)
T ss_dssp HTCHHHHHHHHHHHHHHHTTSCT-TSCCCHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTST-HHHHH
T ss_pred cCCHHHHHHHHHHHHHhChhhhh-hhhcccchhHHHHHHHHHHHHHHcCccchhhHhhhhhhhccccccccccc-ccchh
Confidence 36666666655443 21 112222334556677888889999999999988888765432 11111 22222
Q ss_pred HHHHHHHHHHHHHhhhHHHHHHHHHHHHc
Q psy4458 75 LKYYRLMIELDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 75 ~~y~~~~~~~~~~~~~f~eaa~~y~e~~~ 103 (303)
..-+...+..+...++|-+|..+|..+++
T Consensus 100 ~~a~~~~g~~~~~lg~~eeA~~~~~~Al~ 128 (156)
T d2hr2a1 100 ISAVYSRALALDGLGRGAEAMPEFKKVVE 128 (156)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344578889999999999999998875
No 84
>d1elra_ a.118.8.1 (A:) Hop {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.45 E-value=37 Score=23.27 Aligned_cols=61 Identities=13% Similarity=-0.017 Sum_probs=47.7
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHc
Q psy4458 34 LILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILT 103 (303)
Q Consensus 34 ~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~ 103 (303)
-.-++...++..++|..|..+.+++-.... . + ...+..++..+...++|.+|-..|..++.
T Consensus 6 ~~k~~G~~~~~~~~y~~Ai~~y~~al~~~p--~---~----~~~~~~~a~~~~~~~~~~~A~~~~~~al~ 66 (128)
T d1elra_ 6 KEKELGNDAYKKKDFDTALKHYDKAKELDP--T---N----MTYITNQAAVYFEKGDYNKCRELCEKAIE 66 (128)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHCT--T---C----HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHhCc--c---c----HHHHHhHHHHHHHcCchHHHHHHHHHHHH
Confidence 345678889999999999999999887542 1 2 23455678899999999999999988853
No 85
>d1tjca_ a.118.8.1 (A:) Prolyl 4-hydroxylase alpha-1 subunit, P4HA1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=48.02 E-value=22 Score=23.23 Aligned_cols=59 Identities=14% Similarity=0.120 Sum_probs=42.5
Q ss_pred ccCCHHHHHHHHhcc-ccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhc
Q psy4458 4 DEGDVTEAANIIQEL-QVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKF 62 (303)
Q Consensus 4 ~~~~~~~Aa~~L~~i-~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~ 62 (303)
..|++.+|...+.+. ..-....-+...+.+.+-..+..+...||+.+|..+.+++-..-
T Consensus 17 ~~g~y~~A~~~~~~Al~~~~~~~~~~~~~~~~l~~Lg~~~~~~g~~~~A~~~y~~aL~l~ 76 (95)
T d1tjca_ 17 TEADYYHTELWMEQALRQLDEGEISTIDKVSVLDYLSYAVYQQGDLDKALLLTKKLLELD 76 (95)
T ss_dssp HTTCHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred HCCCHHHHHHHHHHHHHHHhhhhccCccHHHHHHHHhhHHHhcCChHHHHHHHHHHHHhC
Confidence 468999998877654 22111222233567788888999999999999999999987654
No 86
>d2gaua1 a.4.5.4 (A:152-232) Transcriptional regulator PG0396, C-terminal domain {Porphyromonas gingivalis [TaxId: 837]}
Probab=47.75 E-value=11 Score=24.29 Aligned_cols=42 Identities=12% Similarity=0.227 Sum_probs=33.8
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEecc
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFAR 262 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~ 262 (303)
.+|-+.||..+|+|.+-+=+.+.+|-.+|.|.- ..+.|...+
T Consensus 29 ~lt~~eLA~~~G~sretvsr~L~~l~~~glI~~----~~~~i~I~d 70 (81)
T d2gaua1 29 YLSREELATLSNMTVSNAIRTLSTFVSERMLAL----DGKRIKIID 70 (81)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHHHHHHHTTSEEE----ETTEEEESC
T ss_pred cCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEe----cCCEEEEcC
Confidence 467888999999999999999999999997752 344555544
No 87
>d1zk8a1 a.4.1.9 (A:6-77) Transcriptional regulator BC5000 {Bacillus cereus [TaxId: 1396]}
Probab=47.64 E-value=11 Score=23.87 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=22.5
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~ 232 (303)
|++.=+..+. +-|..+|++.||+..|+|+.
T Consensus 8 Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~ 38 (72)
T d1zk8a1 8 IVETAAEIADANGVQEVTLASLAQTLGVRSP 38 (72)
T ss_dssp HHHHHHHHHHHHCGGGCCHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHhCCCcccHHHHHHHhCCCHH
Confidence 3444444444 46999999999999999965
No 88
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=47.61 E-value=10 Score=24.27 Aligned_cols=34 Identities=9% Similarity=0.185 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 200 KHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 200 ~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
+.+|++-=+..+. +-|..+|+..||+..|+|..-
T Consensus 8 r~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~ 42 (77)
T d2gfna1 8 RRALADAVLALIAREGISAVTTRAVAEESGWSTGV 42 (77)
T ss_dssp HHHHHHHHHHHHHHHCGGGCCHHHHHHHHSSCHHH
T ss_pred HHHHHHHHHHHHHHhCccccCHHHHHHHHCCCHHH
Confidence 4455555555554 569999999999999999653
No 89
>d1ku3a_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermus aquaticus [TaxId: 271]}
Probab=47.17 E-value=16 Score=22.64 Aligned_cols=28 Identities=14% Similarity=0.190 Sum_probs=23.4
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhh
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMV 242 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI 242 (303)
....|+..+|+.+|+|.+.|-.+..+.+
T Consensus 26 ~~~~tl~eIa~~lgiS~erVrqi~~~al 53 (61)
T d1ku3a_ 26 GREHTLEEVGAYFGVTRERIRQIENKAL 53 (61)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 4789999999999999998877665544
No 90
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=46.40 E-value=11 Score=23.54 Aligned_cols=31 Identities=13% Similarity=0.216 Sum_probs=23.0
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
|++.=+..+. +-|..+|+..||+..|+|+.-
T Consensus 5 il~aa~~l~~~~G~~~~si~~Ia~~agvs~~t 36 (70)
T d2gena1 5 ILQAALACFSEHGVDATTIEMIRDRSGASIGS 36 (70)
T ss_dssp HHHHHHHHHHHHCTTTCCHHHHHHHHCCCHHH
T ss_pred HHHHHHHHHHHhCcccCCHHHHHHHHCcCHHH
Confidence 4444444443 569999999999999999754
No 91
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=44.92 E-value=16 Score=23.16 Aligned_cols=34 Identities=9% Similarity=0.176 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHHh-hhceeeHHHHHHHhCCCHH
Q psy4458 199 LKHRVVEHNIRVMAK-YYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 199 l~~~i~ehNi~~isk-~Y~~Itl~~la~ll~ls~~ 232 (303)
-+.+|++.=+..+.+ -|..+|+..||+..|+|..
T Consensus 8 ~r~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~ 42 (76)
T d2fd5a1 8 TRARILGAATQALLERGAVEPSVGEVMGAAGLTVG 42 (76)
T ss_dssp HHHHHHHHHHHHHHHHTTTSCCHHHHHHHTTCCGG
T ss_pred HHHHHHHHHHHHHHHhCcccccHHHHHHHhCCCcc
Confidence 445666666666654 5999999999999999853
No 92
>d1hw1a1 a.4.5.6 (A:5-78) Fatty acid responsive transcription factor FadR, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=44.87 E-value=24 Score=22.60 Aligned_cols=38 Identities=16% Similarity=0.202 Sum_probs=34.8
Q ss_pred hhhcee-eHHHHHHHhCCCHHHHHHHHHhhhhcCceEEE
Q psy4458 213 KYYTRI-TLQRMCDLLGLPIEETEEFLSSMVVSKTITAK 250 (303)
Q Consensus 213 k~Y~~I-tl~~la~ll~ls~~~vE~~l~~mI~~~~l~ak 250 (303)
+|=+.+ +...||+.||+|..-|.+-+..+..+|-|..+
T Consensus 22 ~~G~~LPs~~eLa~~~~vSr~tvr~Al~~L~~~G~i~~~ 60 (74)
T d1hw1a1 22 PPGTILPAERELSELIGVTRTTLREVLQRLARDGWLTIQ 60 (74)
T ss_dssp CTTSBCCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEE
Confidence 467889 89999999999999999999999999998765
No 93
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=44.84 E-value=15 Score=22.93 Aligned_cols=32 Identities=9% Similarity=0.382 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHh--hhceeeHHHHHHHhCCCHH
Q psy4458 201 HRVVEHNIRVMAK--YYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 201 ~~i~ehNi~~isk--~Y~~Itl~~la~ll~ls~~ 232 (303)
.+|++.=+..+.+ -|..+|+..||+..|+|+.
T Consensus 5 ~~Ii~aa~~l~~e~~G~~~~t~~~Ia~~agvs~~ 38 (68)
T d1z0xa1 5 DTIIAAAFSLLEKSPTLEQLSMRKVAKQLGVQAP 38 (68)
T ss_dssp HHHHHHHHHHHHHSCCGGGCCHHHHHHHHTSCHH
T ss_pred HHHHHHHHHHHHHcCCccccCHHHHHHHHCcchh
Confidence 3466666666763 4999999999999999965
No 94
>d1xnfa_ a.118.8.1 (A:) Lipoprotein NlpI {Escherichia coli [TaxId: 562]}
Probab=44.68 E-value=57 Score=24.37 Aligned_cols=103 Identities=5% Similarity=-0.219 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCCCCCCChHHHHHHHHHHHHHHHhCCCCchhhHhHHHhhhhhhcCCch
Q psy4458 72 ELKLKYYRLMIELDQHEGSYLATCKHYRAILTTPCIQSDPVQRHAVLQNVVLYLMLAPYDNEQSDLTHRVLEDKLLNEIP 151 (303)
Q Consensus 72 e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t~~~~~~~~~~~~~L~~~v~~~iLs~~~~~r~~ll~~l~~~~~~~~~p 151 (303)
+.+-..+..+|..+...++|-+|-..|..++....- + . .......+.+.-+..+..-...+-..+..+|.. .+
T Consensus 34 ~~~a~~~~~~G~~y~~~g~~~~A~~~~~~al~l~p~--~-~--~a~~~lg~~~~~~g~~~~A~~~~~~al~~~p~~--~~ 106 (259)
T d1xnfa_ 34 DERAQLLYERGVLYDSLGLRALARNDFSQALAIRPD--M-P--EVFNYLGIYLTQAGNFDAAYEAFDSVLELDPTY--NY 106 (259)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHCCC--C-H--HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTC--TH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHhhccCCC--C-H--HHHhhhchHHHHHHHHHHhhhhhhHHHHHHhhh--hh
Confidence 344566667899999999999999999999864211 1 1 122233444444444443333333344445532 33
Q ss_pred HHHHHHHHhcCCcccCchHHHHHHHHhhcccc
Q psy4458 152 LYKGLLQWFTNPELIKWSGLRQLYEEELFKTS 183 (303)
Q Consensus 152 ~~~~L~~~f~~~~li~~~~~~~~~~~~L~~~~ 183 (303)
.+..+..++... -++......|+..++.+|
T Consensus 107 a~~~lg~~~~~~--g~~~~A~~~~~~al~~~p 136 (259)
T d1xnfa_ 107 AHLNRGIALYYG--GRDKLAQDDLLAFYQDDP 136 (259)
T ss_dssp HHHHHHHHHHHT--TCHHHHHHHHHHHHHHCT
T ss_pred hHHHHHHHHHHH--hhHHHHHHHHHHHHhhcc
Confidence 456676666433 246666677777776555
No 95
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=44.39 E-value=11 Score=23.86 Aligned_cols=33 Identities=9% Similarity=0.202 Sum_probs=23.7
Q ss_pred HHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 202 RVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 202 ~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
+|++-=+..+. +=|..+|++.||+..|+|+.-+
T Consensus 8 ~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~t~ 41 (74)
T d1v7ba1 8 MILRTAIDYIGEYSLETLSYDSLAEATGLSKSGL 41 (74)
T ss_dssp HHHHHHHHHHHHSCSTTCCHHHHHHHHCSCHHHH
T ss_pred HHHHHHHHHHHHhCccccCHHHHHHHhCcCcchH
Confidence 34444444444 4499999999999999997543
No 96
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=43.70 E-value=23 Score=22.69 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 198 MLKHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 198 ~l~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
..+..|++.=+..+. +-|..+|+..||+..|+|..-
T Consensus 11 ~~r~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t 47 (81)
T d1rkta1 11 KRQAEILEAAKTVFKRKGFELTTMKDVVEESGFSRGG 47 (81)
T ss_dssp HHHHHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHHhCcccCCHHHHHHHhCcCHHH
Confidence 345556666556655 459999999999999999653
No 97
>d1ft9a1 a.4.5.4 (A:134-213) CO-sensing protein CooA, C-terminal domain {Rhodospirillum rubrum [TaxId: 1085]}
Probab=43.22 E-value=11 Score=24.52 Aligned_cols=32 Identities=22% Similarity=0.392 Sum_probs=28.6
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
.+|-+.||..+|++.+-+-+.+..|-.+|-|.
T Consensus 30 ~~t~~eiA~~lG~sretvsr~l~~l~~~g~I~ 61 (80)
T d1ft9a1 30 DFTVEEIANLIGSSRQTTSTALNSLIKEGYIS 61 (80)
T ss_dssp CCCHHHHHHHHCSCHHHHHHHHHHHHHTTSSE
T ss_pred CCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEE
Confidence 46778999999999999999999999998663
No 98
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=42.73 E-value=23 Score=22.31 Aligned_cols=34 Identities=6% Similarity=0.231 Sum_probs=24.5
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
.+|++.=+..+. +-|..+|+..||+..|+|+.-+
T Consensus 7 ~~Il~aa~~l~~~~G~~~~s~~~Ia~~agvs~~~i 41 (74)
T d2g7sa1 7 DDILQCARTLIIRGGYNSFSYADISQVVGIRNASI 41 (74)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHCCCHHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHHCcCcchH
Confidence 344444444443 5699999999999999997643
No 99
>d3broa1 a.4.5.28 (A:3-137) Transcriptional regulator OEOE1854 {Oenococcus oeni [TaxId: 1247]}
Probab=41.83 E-value=34 Score=23.91 Aligned_cols=43 Identities=9% Similarity=0.130 Sum_probs=39.2
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCc
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAG 256 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~g 256 (303)
+-..+|...||+.++++..-+-..+-+|+..|-+.-.-|..++
T Consensus 42 ~~~~it~~ela~~~~~~~~~vs~~l~~L~~~g~v~r~~~~~D~ 84 (135)
T d3broa1 42 KNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDS 84 (135)
T ss_dssp TTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCT
T ss_pred CCCCCCHHHHHHHHCcCHhHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 4466999999999999999999999999999999888888777
No 100
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=41.62 E-value=15 Score=23.01 Aligned_cols=31 Identities=13% Similarity=0.356 Sum_probs=22.4
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
|++-=+..+. +-|..+|+..||+..|+|..-
T Consensus 6 Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~ 37 (72)
T d1vi0a1 6 IIDAAVEVIAENGYHQSQVSKIAKQAGVADGT 37 (72)
T ss_dssp HHHHHHHHHHHHCGGGCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHhCcccccHHHHHHHHCcCHHH
Confidence 3333334444 459999999999999999653
No 101
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=41.38 E-value=13 Score=23.54 Aligned_cols=31 Identities=16% Similarity=0.298 Sum_probs=22.5
Q ss_pred HHHHHHHHHHH-hhhceeeHHHHHHHhCCCHH
Q psy4458 202 RVVEHNIRVMA-KYYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 202 ~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~ 232 (303)
+|++-=+..+. +.|..+|+..||+..|+|..
T Consensus 6 ~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~ 37 (73)
T d1sgma1 6 KILHTASRLSQLQGYHATGLNQIVKESGAPKG 37 (73)
T ss_dssp HHHHHHHHHHHHHCTTTCCHHHHHHHHCCCSC
T ss_pred HHHHHHHHHHHHhCcccCCHHHHHHHhCCCHH
Confidence 34443344443 56999999999999999853
No 102
>d2p7vb1 a.4.13.2 (B:546-613) Sigma70 (SigA, RpoD) {Escherichia coli [TaxId: 562]}
Probab=41.36 E-value=22 Score=22.52 Aligned_cols=29 Identities=14% Similarity=0.149 Sum_probs=24.1
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhh
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVV 243 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~ 243 (303)
+...|++.+|+.+|+|.+.|-.+-.+.+.
T Consensus 23 ~~~~tl~eI~~~lgiSrerVrqie~~al~ 51 (68)
T d2p7vb1 23 NTDYTLEEVGKQFDVTRERIRQIEAKALR 51 (68)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 47789999999999999988777666554
No 103
>d2hsga1 a.35.1.5 (A:2-58) Glucose-resistance amylase regulator CcpA, N-terminal domain {Bacillus megaterium [TaxId: 1404]}
Probab=41.23 E-value=9.7 Score=23.52 Aligned_cols=22 Identities=5% Similarity=0.184 Sum_probs=18.0
Q ss_pred eeeHHHHHHHhCCCHHHHHHHH
Q psy4458 217 RITLQRMCDLLGLPIEETEEFL 238 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l 238 (303)
+|||..+|+..|+|+.-|-..|
T Consensus 1 NvTi~dvA~~agvS~~TVSr~L 22 (57)
T d2hsga1 1 NVTIYDVAREASVSMATVSRVV 22 (57)
T ss_dssp CCCHHHHHHHTTSCHHHHHHHH
T ss_pred CcCHHHHHHHHCcCHHHHHHHh
Confidence 6899999999999987654444
No 104
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=41.12 E-value=20 Score=22.15 Aligned_cols=23 Identities=9% Similarity=0.146 Sum_probs=19.8
Q ss_pred HHhhhceeeHHHHHHHhCCCHHH
Q psy4458 211 MAKYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 211 isk~Y~~Itl~~la~ll~ls~~~ 233 (303)
..+-|..+|+..||+..|+|..-
T Consensus 15 ~~~G~~~~ti~~Ia~~agvs~~~ 37 (69)
T d2np5a1 15 AESGLEGASVREVAKRAGVSIGA 37 (69)
T ss_dssp HHHCGGGCCHHHHHHHHTCCHHH
T ss_pred HHhCccccCHHHHHHHhCCCHHH
Confidence 44669999999999999999754
No 105
>d1or7a1 a.4.13.2 (A:120-187) SigmaE factor (RpoE) {Escherichia coli [TaxId: 562]}
Probab=40.09 E-value=22 Score=22.06 Aligned_cols=31 Identities=3% Similarity=0.168 Sum_probs=26.4
Q ss_pred HhhhceeeHHHHHHHhCCCHHHHHHHHHhhh
Q psy4458 212 AKYYTRITLQRMCDLLGLPIEETEEFLSSMV 242 (303)
Q Consensus 212 sk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI 242 (303)
-.+|...|.+.+|+.+|+|+.-|...+....
T Consensus 29 l~~~~~~s~~eIA~~lgis~~tv~~~l~ra~ 59 (68)
T d1or7a1 29 LRELDGLSYEEIAAIMDCPVGTVRSRIFRAR 59 (68)
T ss_dssp HHHTTCCCHHHHHHHTTSCHHHHHHHHHHHH
T ss_pred HHHHhCCCHHHHHHHHCcCHHHHHHHHHHHH
Confidence 4579999999999999999999988776543
No 106
>d1u5ta2 a.4.5.54 (A:165-232) Vacuolar sorting protein SNF8 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=39.60 E-value=20 Score=22.87 Aligned_cols=46 Identities=17% Similarity=0.131 Sum_probs=38.4
Q ss_pred HHHHHhhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCC
Q psy4458 208 IRVMAKYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPA 255 (303)
Q Consensus 208 i~~isk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~ 255 (303)
|..+++..--||.+.|-..+|.+.+.+...|-.||.+|- |-||-.+
T Consensus 8 vLe~a~~~G~Vt~s~l~~~lgW~~~Ra~~aLd~lv~eGl--~WvD~Q~ 53 (68)
T d1u5ta2 8 ILEICSILGYSSISLLKANLGWEAVRSKSALDEMVANGL--LWIDYQG 53 (68)
T ss_dssp HHHTTTTTSCCBHHHHHHHHCCCSHHHHHHHHHHHHTTS--SEEECSS
T ss_pred HHHHHHHcCceeHHHHHHHhCCCHHHHHHHHHHHHhcCc--EEEecCC
Confidence 444566677889999999999999999999999999996 5677543
No 107
>d1bl0a1 a.4.1.8 (A:9-62) MarA {Escherichia coli [TaxId: 562]}
Probab=39.56 E-value=10 Score=22.51 Aligned_cols=28 Identities=7% Similarity=0.172 Sum_probs=23.5
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhh
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSM 241 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~m 241 (303)
+...++++.||+.+|+|+..+.+...+.
T Consensus 16 ~~~~~tl~~lA~~~~~s~~~l~r~Fk~~ 43 (54)
T d1bl0a1 16 LESPLSLEKVSERSGYSKWHLQRMFKKE 43 (54)
T ss_dssp TTSCCCCHHHHHHSSSCHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHCcCHHHHHHHHHHH
Confidence 4788999999999999999887765543
No 108
>d2i10a1 a.4.1.9 (A:10-78) Putative transcriptional regulator RHA1_ro09068 {Rhodococcus sp. [TaxId: 1831]}
Probab=39.27 E-value=12 Score=23.46 Aligned_cols=22 Identities=14% Similarity=0.267 Sum_probs=19.0
Q ss_pred hhhceeeHHHHHHHhCCCHHHH
Q psy4458 213 KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~v 234 (303)
+-|..+|+..||+..|+|..-+
T Consensus 16 ~G~~~~ti~~Ia~~agvs~~~~ 37 (69)
T d2i10a1 16 QGYEGTSITDLTKALGINPPSL 37 (69)
T ss_dssp HTTTTCCHHHHHHHHTCCHHHH
T ss_pred HCcccCCHHHHHHHhCCChhHH
Confidence 5599999999999999997643
No 109
>d2vkva1 a.4.1.9 (A:6-67) Tetracyclin repressor (Tet-repressor, TetR) {Escherichia coli [TaxId: 562]}
Probab=38.97 E-value=13 Score=22.86 Aligned_cols=31 Identities=13% Similarity=0.220 Sum_probs=22.9
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
|++.=+..+. +-|..+|+..||+..|+|+.-
T Consensus 4 Il~aA~~l~~~~G~~~~s~~~Ia~~agvs~~t 35 (62)
T d2vkva1 4 VINSALELGNEVGIEGLTTRKLAQKLGVEQPT 35 (62)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHhCcccCCHHHHHHHhCCCHHH
Confidence 4444444444 459999999999999999653
No 110
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=38.91 E-value=28 Score=21.72 Aligned_cols=35 Identities=17% Similarity=0.433 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 199 LKHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 199 l~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
-+.+|++-=+..+. +-|..+|+..||+..|+|..-
T Consensus 6 tr~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~ 41 (75)
T d3c07a1 6 TRALILETAMRLFQERGYDRTTMRAIAQEAGVSVGN 41 (75)
T ss_dssp HHHHHHHHHHHHHHHTCSTTCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHH
Confidence 34455555555555 459999999999999999754
No 111
>d2g7la1 a.4.1.9 (A:16-83) Putative transcriptional regulator SCO7704 {Streptomyces coelicolor [TaxId: 1902]}
Probab=38.85 E-value=17 Score=22.62 Aligned_cols=22 Identities=18% Similarity=0.231 Sum_probs=19.1
Q ss_pred HHhhhceeeHHHHHHHhCCCHH
Q psy4458 211 MAKYYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 211 isk~Y~~Itl~~la~ll~ls~~ 232 (303)
..+.|..+|+..||+..|+|..
T Consensus 18 ~~~g~~~~si~~ia~~~gvs~~ 39 (68)
T d2g7la1 18 RAEGLEKVTMRRLAQELDTGPA 39 (68)
T ss_dssp HHHCSSSCCHHHHHHHTTSCHH
T ss_pred HHhCcccCCHHHHHHHHCcCHh
Confidence 3466999999999999999965
No 112
>d1d2za_ a.77.1.2 (A:) Pelle death domain {Drosophila melanogaster [TaxId: 7227]}
Probab=38.66 E-value=23 Score=24.01 Aligned_cols=51 Identities=20% Similarity=0.315 Sum_probs=34.3
Q ss_pred HHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCChhHHHHHHHHH----HHHHHHHHHHHH
Q psy4458 220 LQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDPGEILNEWSAS----LNELMKLVNNTT 288 (303)
Q Consensus 220 l~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~----i~~l~~~v~~~~ 288 (303)
-..||..+|++.++++.+-... -..++++...|..|..+ |..|.+.+.++.
T Consensus 28 Wr~LA~~Lg~~~~~I~~i~~~~------------------~~~~Spt~~lL~~W~~~~~~Tv~~L~~~L~~~~ 82 (102)
T d1d2za_ 28 WQQLATAVKLYPDQVEQISSQK------------------QRGRSASNEFLNIWGGQYNHTVQTLFALFKKLK 82 (102)
T ss_dssp HHHHHHHTTCCHHHHHHHHHHH------------------HTTCCHHHHHHHHHHHHHCCBHHHHHHHHHHTT
T ss_pred HHHHHHHhCCCHHHHHHHHhcc------------------cCCCChHHHHHHHHHhcCCCcHHHHHHHHHHcC
Confidence 6789999999998877553320 01234566899999865 666666666543
No 113
>d1ldja3 e.40.1.1 (A:411-686) Cullin homolog 1, cul-1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=38.62 E-value=24 Score=28.53 Aligned_cols=35 Identities=17% Similarity=0.217 Sum_probs=31.6
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
-...+|++.|++.+|++.+++...|..|+..|-+.
T Consensus 206 ~~~~~t~~ei~~~~~i~~~~l~~~L~~L~~~kll~ 240 (276)
T d1ldja3 206 TEDAYTVQQLTDSTQIKMDILAQVLQILLKSKLLV 240 (276)
T ss_dssp SSSEEEHHHHHHHTCCCHHHHHHHHHHHHHTTTEE
T ss_pred CCCccCHHHHHHHHCcCHHHHHHHHHHHHhCCEEE
Confidence 46789999999999999999999999999888664
No 114
>d1eija_ a.5.6.1 (A:) Hypothetical protein MTH1615 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=38.34 E-value=11 Score=24.55 Aligned_cols=21 Identities=24% Similarity=0.243 Sum_probs=18.9
Q ss_pred HHHHHHHHhhhhcCceEEEec
Q psy4458 232 EETEEFLSSMVVSKTITAKID 252 (303)
Q Consensus 232 ~~vE~~l~~mI~~~~l~akID 252 (303)
..||..|..|...|+|.++|+
T Consensus 37 ~~vE~~liqlaq~G~i~~kis 57 (72)
T d1eija_ 37 EQIELQLIQLAQMGRVRSKIT 57 (72)
T ss_dssp HHHHHHHHHHHHCCSSCCCCC
T ss_pred HHHHHHHHHHHHcCCCCCCcC
Confidence 478999999999999999886
No 115
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=38.34 E-value=20 Score=22.82 Aligned_cols=34 Identities=15% Similarity=0.346 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
.+|++-=+..+. +.|..+|+..||+..|+|..-+
T Consensus 7 e~Il~aa~~~~~~~G~~~~ti~~Ia~~agvs~~s~ 41 (79)
T d2fbqa1 7 ERILDAAEQLFAEKGFAETSLRLITSKAGVNLAAV 41 (79)
T ss_dssp HHHHHHHHHHHHHHCSTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHhCcccccHHHHHHHHCcChhHH
Confidence 345555555554 5799999999999999997543
No 116
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=38.25 E-value=22 Score=22.35 Aligned_cols=33 Identities=9% Similarity=0.285 Sum_probs=24.4
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
..|++-=+..+. +.|..+|+..||+..|+|..-
T Consensus 7 ~~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~t 40 (72)
T d1pb6a1 7 KAILSAALDTFSQFGFHGTRLEQIAELAGVSKTN 40 (72)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHTTSCHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHhCCChHH
Confidence 344544444444 569999999999999999754
No 117
>d1tw3a1 a.4.5.29 (A:14-98) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}
Probab=37.66 E-value=17 Score=23.90 Aligned_cols=34 Identities=9% Similarity=0.051 Sum_probs=30.8
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
..+|++.||+.+|++++-+..++--+..-|-+.-
T Consensus 33 gp~s~~eLA~~~g~~~~~l~rlLr~l~a~gl~~e 66 (85)
T d1tw3a1 33 GARTVKALAARTDTRPEALLRLIRHLVAIGLLEE 66 (85)
T ss_dssp TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCCHHHHHHHhCcChhHHHHHHHHHHHCCCeEe
Confidence 4589999999999999999999999999998753
No 118
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=37.48 E-value=17 Score=23.04 Aligned_cols=33 Identities=18% Similarity=0.321 Sum_probs=24.0
Q ss_pred HHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 202 RVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 202 ~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
+|++.-+..+. +-|..+|+..||+..|+|..-+
T Consensus 7 ~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~i 40 (75)
T d2id6a1 7 AILKAAVEVFGKKGYDRATTDEIAEKAGVAKGLI 40 (75)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHTCCTHHH
T ss_pred HHHHHHHHHHHHhCccccCHHHHHHHhCCCHHHH
Confidence 34444444444 4699999999999999996543
No 119
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=35.67 E-value=27 Score=22.02 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
.+|++-=+..+. +-|..+|+..||+..|+|..-
T Consensus 8 ~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~ 41 (75)
T d2hyja1 8 GRILGRAAEIASEEGLDGITIGRLAEELEMSKSG 41 (75)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHhCcccCcHHHHHHHHCcCHHH
Confidence 344444444444 459999999999999999653
No 120
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=35.34 E-value=57 Score=21.67 Aligned_cols=33 Identities=12% Similarity=0.087 Sum_probs=30.6
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceE
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~ 248 (303)
..++..+|....++|..-+.+.+..|+..|-|.
T Consensus 17 ~g~~kT~i~~~aNLs~~~~~kyl~~L~~~GLI~ 49 (90)
T d1r7ja_ 17 SGSPKTRIMYGANLSYALTGRYIKMLMDLEIIR 49 (90)
T ss_dssp TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEE
T ss_pred CCCCccHHHHHcCCCHHHHHHHHHHHHHCCCee
Confidence 467889999999999999999999999999996
No 121
>d1j5ya1 a.4.5.1 (A:3-67) Putative transcriptional regulator TM1602, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=35.11 E-value=33 Score=21.11 Aligned_cols=30 Identities=3% Similarity=-0.006 Sum_probs=26.1
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCc
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKT 246 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~ 246 (303)
.||.+.||+.||+|..-+-+.+..+=..|-
T Consensus 22 ~vs~~~La~~l~VS~~TI~rdi~~L~~~G~ 51 (65)
T d1j5ya1 22 PVSGAQLAEELSVSRQVIVQDIAYLRSLGY 51 (65)
T ss_dssp CBCHHHHHHHHTSCHHHHHHHHHHHHHHTC
T ss_pred CCcHHHHHHHHCCCHHHHHHHHHHHHHCCC
Confidence 499999999999999999998888766663
No 122
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.35 E-value=28 Score=22.08 Aligned_cols=34 Identities=12% Similarity=0.271 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHH
Q psy4458 199 LKHRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 199 l~~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~ 232 (303)
.+..|++-=...+. +-|..+|+..||+..|+|+.
T Consensus 10 ~r~~il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~ 44 (79)
T d2oi8a1 10 VRAEIKDHAWEQIATAGASALSLNAIAKRMGMSGP 44 (79)
T ss_dssp HHHHHHHHHHHHHHHHCTTSCCHHHHHHHTTCCHH
T ss_pred HHHHHHHHHHHHHHHhCccccCHHHHHHHhCCCCC
Confidence 44455555555554 56999999999999999965
No 123
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.02 E-value=24 Score=21.87 Aligned_cols=31 Identities=10% Similarity=0.063 Sum_probs=22.5
Q ss_pred HHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 203 VVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 203 i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
|++--+..+. +-|..+|+..||+..|+|..-
T Consensus 7 Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~ 38 (68)
T d2d6ya1 7 IFEAAVAEFARHGIAGARIDRIAAEARANKQL 38 (68)
T ss_dssp HHHHHHHHHHHHTTTSCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHhCccccCHHHHHHHHCcchhH
Confidence 3333334443 569999999999999999653
No 124
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=33.74 E-value=23 Score=22.59 Aligned_cols=33 Identities=6% Similarity=0.267 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
.+|++-=+..+. +-|..+|++.||+..|+|..-
T Consensus 10 ~~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~t 43 (78)
T d2o7ta1 10 EHIITTTCNLYRTHHHDSLTMENIAEQAGVGVAT 43 (78)
T ss_dssp HHHHHHHHHHHHHSCGGGCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHHhCccccCHHHHHHHhCCCHHH
Confidence 345554445554 459999999999999999653
No 125
>d2bgca1 a.4.5.4 (A:138-237) Listeriolysin regulatory protein PrfA, C-terminal domain {Bacteria (Listeria monocytogenes) [TaxId: 1639]}
Probab=33.28 E-value=54 Score=22.11 Aligned_cols=54 Identities=15% Similarity=0.243 Sum_probs=39.2
Q ss_pred eeeHHHHHHHhCCC-HHHHHHHHHhhhhcCceEEEecCCCceEEeccCCChhHHHHHHHHHHH
Q psy4458 217 RITLQRMCDLLGLP-IEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDPGEILNEWSASLN 278 (303)
Q Consensus 217 ~Itl~~la~ll~ls-~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~i~ 278 (303)
.+|=+.||.++|++ .+-|=+.+.+|-.+|-|.- ..|.|...++ +.|.+.+.+.+
T Consensus 31 ~lTqeeLA~~lG~s~ReTVsR~L~~L~~~GlI~~----~~~~i~I~D~----~~L~~~A~~~d 85 (100)
T d2bgca1 31 NLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVY----KNSCFYVQNL----DYLKRYAPKLD 85 (100)
T ss_dssp CCCHHHHHHHTTCCCHHHHHHHHHHHHHTTSEEE----ETTEEEESCH----HHHHHHCHHHH
T ss_pred ccCHHHHHHHhCCchHHHHHHHHHHHHHCCCEEE----cCCEEEEeCH----HHHHHHhcccc
Confidence 57889999999997 5778999999999997763 3455666544 34444444433
No 126
>d1ttya_ a.4.13.2 (A:) Sigma70 (SigA, RpoD) {Thermotoga maritima [TaxId: 2336]}
Probab=33.12 E-value=22 Score=23.75 Aligned_cols=29 Identities=10% Similarity=0.071 Sum_probs=23.7
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhh
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVV 243 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~ 243 (303)
...-|++.||+.+|+|.+.|-.+-.+.+.
T Consensus 36 ~~~~tl~eI~~~lgiSrERVRQie~~al~ 64 (87)
T d1ttya_ 36 GKPKTLEEVGQYFNVTRERIRQIEVKALR 64 (87)
T ss_dssp SSCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 37889999999999999988776665543
No 127
>d1nzna_ a.118.8.1 (A:) Mitochondria fission protein Fis1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.88 E-value=72 Score=21.76 Aligned_cols=64 Identities=16% Similarity=0.108 Sum_probs=39.8
Q ss_pred HHHHHHHHHHh---hcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcC
Q psy4458 34 LILEQMRLCLA---KKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTT 104 (303)
Q Consensus 34 ~~L~~~rL~L~---~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t 104 (303)
..+..++..+. .+|+.+|-.+.+++-..- . ...+...+...|..|...++|.+|-++|..++..
T Consensus 35 ~~~n~a~~L~~s~~~~d~~~Ai~~l~~~l~~~---~----~~~~~~~~~~Lg~~y~~~g~~~~A~~~~~~aL~~ 101 (122)
T d1nzna_ 35 TQFEYAWCLVRTRYNDDIRKGIVLLEELLPKG---S----KEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQT 101 (122)
T ss_dssp HHHHHHHHHTTSSSHHHHHHHHHHHHHHTTTS---C----HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHhcc---C----CchHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHh
Confidence 44555665554 345556666666654211 1 1223334445788888999999999999988764
No 128
>d1hsja1 a.4.5.28 (A:373-487) Staphylococcal accessory regulator A homolog, SarR {Staphylococcus aureus [TaxId: 1280]}
Probab=31.75 E-value=40 Score=23.15 Aligned_cols=43 Identities=9% Similarity=-0.029 Sum_probs=36.9
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCce
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGI 257 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~gi 257 (303)
-..+|...||+.++++..-+=..+..|...|-+.=.-|..++-
T Consensus 46 ~~~~t~~ela~~l~~~~~~vs~~i~~Le~~gli~r~~~~~D~R 88 (115)
T d1hsja1 46 SNEISSKEIAKCSEFKPYYLTKALQKLKDLKLLSKKRSLQDER 88 (115)
T ss_dssp CSEEEHHHHHHSSCCCHHHHHHHHHHHHTTTTSCCEECCSSSS
T ss_pred CCCcCHHHHHHHHCCChhhHHHHHHHHHHcCCeEEEeecCCCc
Confidence 4469999999999999999999999999999886666555554
No 129
>d2fx0a1 a.4.1.9 (A:4-76) Hemolysin II regulatory protein, HlyIIR {Bacillus cereus [TaxId: 1396]}
Probab=31.49 E-value=40 Score=21.09 Aligned_cols=34 Identities=6% Similarity=0.197 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHHH
Q psy4458 201 HRVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEET 234 (303)
Q Consensus 201 ~~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~v 234 (303)
.+|++-=+..+. +-|..+|+..||+..|+|+.-+
T Consensus 7 ~~Il~aa~~l~~~~G~~~~si~~Ia~~agvs~~~~ 41 (73)
T d2fx0a1 7 ENILKAAKKKFGERGYEGTSIQEIAKEAKVNVAMA 41 (73)
T ss_dssp HHHHHHHHHHHHHHCTTTCCHHHHHHHHTSCHHHH
T ss_pred HHHHHHHHHHHHHhCcccCcHHHHHHHHCcChhHH
Confidence 344444444444 5599999999999999997643
No 130
>d1s7oa_ a.4.13.3 (A:) Hypothetical protein SPy1201 {Streptococcus pyogenes [TaxId: 1314]}
Probab=31.40 E-value=23 Score=24.52 Aligned_cols=32 Identities=13% Similarity=0.183 Sum_probs=27.5
Q ss_pred HhhhceeeHHHHHHHhCCCHHHHHHHHHhhhh
Q psy4458 212 AKYYTRITLQRMCDLLGLPIEETEEFLSSMVV 243 (303)
Q Consensus 212 sk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~ 243 (303)
-.+|.-.|.+.||+.+|+|+.-|-..+.+...
T Consensus 27 L~y~~~ls~~EIA~~lgiS~~aV~~~l~RA~~ 58 (106)
T d1s7oa_ 27 LYYADDYSLAEIADEFGVSRQAVYDNIKRTEK 58 (106)
T ss_dssp HHHHTCCCHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred HHHHcCCCHHHHHHHHCcCHHHHHHHHHHHHH
Confidence 35799999999999999999999888877653
No 131
>d2fbna1 a.118.8.1 (A:22-174) Putative 70 kda peptidylprolyl isomerase PFL2275c {Plasmodium falciparum [TaxId: 5833]}
Probab=31.30 E-value=80 Score=22.11 Aligned_cols=80 Identities=15% Similarity=0.164 Sum_probs=54.0
Q ss_pred CCchHHHHHHH---HHHHHHHHhhcchhHHHHHHHHhhhhccCCCC-c------chHHHHHHHHHHHHHHHHHhhhHHHH
Q psy4458 25 SMEKKEKVTLI---LEQMRLCLAKKDYIRTQIISKKINTKFFDDEK-D------DVQELKLKYYRLMIELDQHEGSYLAT 94 (303)
Q Consensus 25 ~~~~~~k~~~~---L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~-~------~~~e~k~~y~~~~~~~~~~~~~f~ea 94 (303)
.|+..+|++-. -+..--++..|+|..|...-.++-..+..... + ....+++..+.=++..|...++|-+|
T Consensus 7 ~~~~~e~~~~a~~~~~~G~~~f~~~~y~~A~~~Y~~al~~~~~~~~~~~~~~~~~~~~~~~~~~~Nla~~~~~l~~~~~A 86 (153)
T d2fbna1 7 DYTDEEKVQSAFDIKEEGNEFFKKNEINEAIVKYKEALDFFIHTEEWDDQILLDKKKNIEISCNLNLATCYNKNKDYPKA 86 (153)
T ss_dssp GCCHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHTTTTCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHhhCcchhhhhhHHHHHhhhhHHHHHHhhHHHHHHHhcccchh
Confidence 46777887764 34566778899999999877777654422211 0 01223344454577888889999999
Q ss_pred HHHHHHHHcC
Q psy4458 95 CKHYRAILTT 104 (303)
Q Consensus 95 a~~y~e~~~t 104 (303)
-..|..++..
T Consensus 87 l~~~~~al~~ 96 (153)
T d2fbna1 87 IDHASKVLKI 96 (153)
T ss_dssp HHHHHHHHHH
T ss_pred hhhhhccccc
Confidence 9999998754
No 132
>d2onda1 a.118.8.7 (A:242-549) Cleavage stimulation factor 77 kDa subunit CSTF3 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=31.29 E-value=1.1e+02 Score=23.81 Aligned_cols=27 Identities=11% Similarity=0.161 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhcchhHHHHHHHHhhh
Q psy4458 34 LILEQMRLCLAKKDYIRTQIISKKINT 60 (303)
Q Consensus 34 ~~L~~~rL~L~~~D~~~a~~~~~ki~~ 60 (303)
+.+..+.+....+++.+|..+.+++-.
T Consensus 101 l~~~ya~~~~~~~~~~~a~~i~~~~l~ 127 (308)
T d2onda1 101 LYFAYADYEESRMKYEKVHSIYNRLLA 127 (308)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhcccHHHHHHHHHHHHH
Confidence 445556666666777777776666543
No 133
>d1biaa1 a.4.5.1 (A:1-63) Biotin repressor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.24 E-value=36 Score=20.89 Aligned_cols=33 Identities=6% Similarity=0.027 Sum_probs=29.0
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCc
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSSMVVSKT 246 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~ 246 (303)
-=..+|-+.||+.||+|..-|-+.+..+=..|-
T Consensus 16 ~~~~~s~~eLa~~l~vS~~ti~r~i~~L~~~G~ 48 (63)
T d1biaa1 16 NGEFHSGEQLGETLGMSRAAINKHIQTLRDWGV 48 (63)
T ss_dssp TSSCBCHHHHHHHHTSCHHHHHHHHHHHHHTTC
T ss_pred HCCcCCHHHHHHHHCcCHHHHHHHHHHHHHCCC
Confidence 355689999999999999999999999888874
No 134
>d1d5ya1 a.4.1.8 (A:3-56) Rob transcription factor, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=30.76 E-value=24 Score=20.69 Aligned_cols=27 Identities=7% Similarity=0.129 Sum_probs=22.4
Q ss_pred hhceeeHHHHHHHhCCCHHHHHHHHHh
Q psy4458 214 YYTRITLQRMCDLLGLPIEETEEFLSS 240 (303)
Q Consensus 214 ~Y~~Itl~~la~ll~ls~~~vE~~l~~ 240 (303)
+...||++.||+.+|+|+..+.+.--+
T Consensus 16 ~~~~itl~~lA~~~~~S~~~l~r~Fk~ 42 (54)
T d1d5ya1 16 LDQPLSLDNVAAKAGYSKWHLQRMFKD 42 (54)
T ss_dssp SSSSCCCHHHHTTTSSCHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHCcCHHHHHHHHHH
Confidence 378899999999999999887765544
No 135
>d2pqrb1 a.118.8.1 (B:5-128) Mitochondria fission protein Fis1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.06 E-value=57 Score=23.10 Aligned_cols=53 Identities=9% Similarity=0.090 Sum_probs=40.0
Q ss_pred cCCHHHHHHHHhccccccccCCchHHHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhc
Q psy4458 5 EGDVTEAANIIQELQVETYGSMEKKEKVTLILEQMRLCLAKKDYIRTQIISKKINTKF 62 (303)
Q Consensus 5 ~~~~~~Aa~~L~~i~vet~~~~~~~~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~ 62 (303)
.+++.+|..+|.++--. ++..+-|.+-..+-.|...|||.+|..++.++-..-
T Consensus 51 ~~d~~~gI~lLe~~~~~-----~p~~~rd~lY~Lav~yyklgdy~~A~~~~~~~L~ie 103 (124)
T d2pqrb1 51 VNDERLGVKILTDIYKE-----AESRRRECLYYLTIGCYKLGEYSMAKRYVDTLFEHE 103 (124)
T ss_dssp HHHHHHHHHHHHHHHHH-----CGGGHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHhc-----CchhHHHHHHHHHHHHHHHhhHHHHHHHHHHHHccC
Confidence 35788899999887421 233455776777777899999999999999987654
No 136
>d1mlaa2 d.58.23.1 (A:128-197) Probable ACP-binding domain of malonyl-CoA ACP transacylase {Escherichia coli [TaxId: 562]}
Probab=29.61 E-value=10 Score=24.26 Aligned_cols=41 Identities=10% Similarity=0.247 Sum_probs=31.8
Q ss_pred HHHHhCCCHHHHHHHHHhhhhcCce-EEEecCCCceEEeccC
Q psy4458 223 MCDLLGLPIEETEEFLSSMVVSKTI-TAKIDRPAGIINFARN 263 (303)
Q Consensus 223 la~ll~ls~~~vE~~l~~mI~~~~l-~akIDq~~giV~f~~~ 263 (303)
|+-.+|++++.+|..+.+.-..+.+ -|-++-+.++|.-...
T Consensus 5 MaAVlg~~~~~v~~i~~~~~~~~~v~iAN~Nsp~Q~VISG~~ 46 (70)
T d1mlaa2 5 MAAIIGLDDASIAKACEEAAEGQVVSPVNFNSPGQVVIAGHK 46 (70)
T ss_dssp EEEEESCCHHHHHHHHHHHCTTSCEEEEEEEETTEEEEEEEH
T ss_pred EEEEeCCCHHHHHHHHHHhcCCCEEEEEecCCCcceeeeCCH
Confidence 4456799999999998876555555 4679999999988754
No 137
>d2iu5a1 a.4.1.9 (A:1-71) Transcriptional activator DhaS {Lactococcus lactis [TaxId: 1358]}
Probab=29.37 E-value=30 Score=21.54 Aligned_cols=22 Identities=9% Similarity=0.229 Sum_probs=19.0
Q ss_pred HHhhhceeeHHHHHHHhCCCHH
Q psy4458 211 MAKYYTRITLQRMCDLLGLPIE 232 (303)
Q Consensus 211 isk~Y~~Itl~~la~ll~ls~~ 232 (303)
..+.|..+|+..||+..|+|..
T Consensus 20 ~~~G~~~~sv~~Ia~~agvs~~ 41 (71)
T d2iu5a1 20 QSNAYHQISVSDIMQTAKIRRQ 41 (71)
T ss_dssp HHSCGGGCCHHHHHHHHTSCGG
T ss_pred HHcCcccCCHHHHHHHhCcccc
Confidence 3467999999999999999854
No 138
>d1xsva_ a.4.13.3 (A:) Hypothetical protein SAV1236 {Staphylococcus aureus, strain Mu50 / ATCC 700699 [TaxId: 1280]}
Probab=28.95 E-value=22 Score=24.68 Aligned_cols=30 Identities=10% Similarity=0.171 Sum_probs=26.8
Q ss_pred hhhceeeHHHHHHHhCCCHHHHHHHHHhhh
Q psy4458 213 KYYTRITLQRMCDLLGLPIEETEEFLSSMV 242 (303)
Q Consensus 213 k~Y~~Itl~~la~ll~ls~~~vE~~l~~mI 242 (303)
.+|.-.|++.+|+.+|+|+.-|...+.+..
T Consensus 30 ~~~e~ls~~EIA~~lgiS~~aV~~~l~Ra~ 59 (106)
T d1xsva_ 30 FYLEDYSLSEIADTFNVSRQAVYDNIRRTG 59 (106)
T ss_dssp HHTSCCCHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred HHHhCCcHHHHHHHHCcCHHHHHHHHHHHH
Confidence 479999999999999999999988887765
No 139
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=28.88 E-value=39 Score=20.95 Aligned_cols=32 Identities=6% Similarity=0.202 Sum_probs=23.2
Q ss_pred HHHHHHHHHHH-hhhceeeHHHHHHHhCCCHHH
Q psy4458 202 RVVEHNIRVMA-KYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 202 ~i~ehNi~~is-k~Y~~Itl~~la~ll~ls~~~ 233 (303)
+|++-=+..+. +-|..+|++.||+..|+|..-
T Consensus 6 ~Il~aa~~l~~~~G~~~~ti~~Ia~~agvs~~~ 38 (72)
T d2g3ba1 6 AILKASATAIAQRGIRGLRVNDVAEVAGVSPGL 38 (72)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHTSCHHH
T ss_pred HHHHHHHHHHHHhCcccCCHHHHHHHhCcCHHH
Confidence 34444444444 559999999999999999653
No 140
>d1ya0a1 a.118.8.1 (A:1-497) SMG-7 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.83 E-value=82 Score=27.06 Aligned_cols=64 Identities=9% Similarity=0.082 Sum_probs=51.5
Q ss_pred HHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHcCC
Q psy4458 33 TLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAILTTP 105 (303)
Q Consensus 33 ~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~~~t~ 105 (303)
..++..+.++...++|..|..+.+++.....+. | ..+...|..+...+++.+|-.+|..++...
T Consensus 153 ~~~~~LG~l~~~~~~~~~A~~~y~~A~~l~P~~-~--------~~~~~Lg~~~~~~~~~~~A~~~y~ral~~~ 216 (497)
T d1ya0a1 153 HCLVHLGDIARYRNQTSQAESYYRHAAQLVPSN-G--------QPYNQLAILASSKGDHLTTIFYYCRSIAVK 216 (497)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHCTTB-S--------HHHHHHHHHHHHTTCHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHcccHHHHHHHHHHHHHHCCCc-h--------HHHHHHHHHHHHcCCHHHHHHHHHHHHhCC
Confidence 346677888889999999999999998877433 3 234558888899999999999999998753
No 141
>d1efaa1 a.35.1.5 (A:2-60) Lac repressor (LacR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=27.69 E-value=19 Score=22.21 Aligned_cols=23 Identities=13% Similarity=0.329 Sum_probs=18.0
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHH
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFL 238 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l 238 (303)
+.+|+..+|+..|+|+.-|-..|
T Consensus 1 k~~Ti~diA~~agvS~sTVSr~l 23 (59)
T d1efaa1 1 KPVTLYDVAEYAGVSYQTVSRVV 23 (59)
T ss_dssp CCCCHHHHHHTTTSCHHHHHHHH
T ss_pred CCCCHHHHHHHHCCCHHHHHHHH
Confidence 36899999999999987654433
No 142
>d1ucra_ a.4.5.45 (A:) Dissimilatory sulfite reductase DsvD {Desulfovibrio vulgaris [TaxId: 881]}
Probab=27.44 E-value=39 Score=21.70 Aligned_cols=35 Identities=14% Similarity=0.347 Sum_probs=29.7
Q ss_pred hhceeeHHHHHHHh-CCCHHHHHHHHHhhhhcCceE
Q psy4458 214 YYTRITLQRMCDLL-GLPIEETEEFLSSMVVSKTIT 248 (303)
Q Consensus 214 ~Y~~Itl~~la~ll-~ls~~~vE~~l~~mI~~~~l~ 248 (303)
.=+..-|..+...+ +..+-++-+.+..||++|+|.
T Consensus 18 ~KsKfYfkDf~k~~Pd~k~R~vKK~~~~lV~e~~L~ 53 (74)
T d1ucra_ 18 SKSKFYFNDFTDLFPDMKQREVKKILTALVNDEVLE 53 (74)
T ss_dssp HSSCEEHHHHHHHCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CcCceeHHHHHHHCCCccHHHHHHHHHHHhccceEE
Confidence 44555588899998 889999999999999999883
No 143
>d2fq4a1 a.4.1.9 (A:9-77) Transcriptional regulator BC3163 {Bacillus cereus [TaxId: 1396]}
Probab=27.32 E-value=54 Score=20.08 Aligned_cols=32 Identities=3% Similarity=0.229 Sum_probs=23.2
Q ss_pred HHHHHHHHHH-HhhhceeeHHHHHHHhCCCHHH
Q psy4458 202 RVVEHNIRVM-AKYYTRITLQRMCDLLGLPIEE 233 (303)
Q Consensus 202 ~i~ehNi~~i-sk~Y~~Itl~~la~ll~ls~~~ 233 (303)
+|++--+..+ .+-|..+|+..||+..|+|+.-
T Consensus 8 ~Il~aa~~l~~~~G~~~~t~~~Ia~~agvs~~~ 40 (69)
T d2fq4a1 8 AILSASYELLLESGFKAVTVDKIAERAKVSKAT 40 (69)
T ss_dssp HHHHHHHHHHHHHCTTTCCHHHHHHHHTCCHHH
T ss_pred HHHHHHHHHHHHhCcccCCHHHHHHHHCcCHHH
Confidence 3444333433 3569999999999999999764
No 144
>d2fbka1 a.4.5.28 (A:8-179) Transcriptional regulator DR1159 {Deinococcus radiodurans [TaxId: 1299]}
Probab=27.29 E-value=19 Score=26.86 Aligned_cols=42 Identities=10% Similarity=0.069 Sum_probs=33.2
Q ss_pred eeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceE
Q psy4458 217 RITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGII 258 (303)
Q Consensus 217 ~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV 258 (303)
.+|.+.||+.++++..-+=..|..|...|-+.-.-|..++-.
T Consensus 79 ~lt~~eLa~~l~i~~~tvsr~l~~Le~~GlV~r~~~~~DrR~ 120 (172)
T d2fbka1 79 GLRPTELSALAAISGPSTSNRIVRLLEKGLIERREDERDRRS 120 (172)
T ss_dssp CBCHHHHHHHCSCCSGGGSSHHHHHHHHTSEECCC-------
T ss_pred CcCHHHHHHHHCcCHhHHHHHHHHHHhCCCeeeeccccchhh
Confidence 589999999999999999999999999999988777776653
No 145
>d1xn7a_ a.4.5.62 (A:) Hypothetical protein YhgG {Escherichia coli [TaxId: 562]}
Probab=26.67 E-value=50 Score=21.30 Aligned_cols=44 Identities=14% Similarity=0.205 Sum_probs=36.8
Q ss_pred HHHHhhhceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecC
Q psy4458 209 RVMAKYYTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDR 253 (303)
Q Consensus 209 ~~isk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq 253 (303)
|-....+-+.....|++.|..|.+-+|.++.++..-|++. +|++
T Consensus 8 RD~iAL~G~~da~qlS~qL~~P~Plv~AMLerL~aMGK~e-rie~ 51 (78)
T d1xn7a_ 8 RDLLALRGRMEAAQISQTLNTPQPMINAMLQQLESMGKAV-RIQE 51 (78)
T ss_dssp HHHHHHSCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEE-EECC
T ss_pred HHHHHHcCcccHHHHHHHHcCChHHHHHHHHHHHHhhcce-eccc
Confidence 3344468889999999999999999999999999999986 4543
No 146
>d1wwha1 d.58.7.1 (A:169-249) Nucleoporin 35 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=26.40 E-value=28 Score=22.52 Aligned_cols=44 Identities=14% Similarity=0.243 Sum_probs=32.6
Q ss_pred hCCCHHHHHHHHHhhhhcCce-EEEecCCCce--EEeccCCChhHHH
Q psy4458 227 LGLPIEETEEFLSSMVVSKTI-TAKIDRPAGI--INFARNKDPGEIL 270 (303)
Q Consensus 227 l~ls~~~vE~~l~~mI~~~~l-~akIDq~~gi--V~f~~~~~~~~~l 270 (303)
.|+|++..+..+..+-.=|.| ..++.+..|. |.|..+.....+|
T Consensus 10 ~G~p~~~~~~il~~F~~~G~I~~~~~~~~~~~~fV~f~~~~~A~~Al 56 (81)
T d1wwha1 10 FGFPQASASYILLQFAQYGNILKHVMSNTGNWMHIRYQSKLQARKAL 56 (81)
T ss_dssp ECCCGGGHHHHHHHHHTTSCEEEEEECSSSSEEEEEESSHHHHHHHH
T ss_pred ECCChHHHHHHHHHHHhhhhhheEEecCCCCEEEEEEcccHHHHHHH
Confidence 489999889888888888877 6788877765 7888765443333
No 147
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=26.32 E-value=25 Score=23.11 Aligned_cols=56 Identities=16% Similarity=0.204 Sum_probs=37.8
Q ss_pred ceeeHHHHHHHhC--CCHHHHHHHHHhhhhc----CceEEEecCCCceEEeccCCChhHHHHHHHHH
Q psy4458 216 TRITLQRMCDLLG--LPIEETEEFLSSMVVS----KTITAKIDRPAGIINFARNKDPGEILNEWSAS 276 (303)
Q Consensus 216 ~~Itl~~la~ll~--ls~~~vE~~l~~mI~~----~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~ 276 (303)
.-+|++.|+++++ +++++++..|-.+..+ ++ .=.|-+++|--.|.... .+..|..+
T Consensus 21 ~Pls~~~L~~~l~~~~~~~~i~~~l~~L~~~y~~~~~-g~el~~~~~gy~~~tk~----e~~~~v~k 82 (85)
T d1t6sa1 21 EPVNLQTLSQITAHKFTPSELQEAVDELNRDYEATGR-TFRIHAIAGGYRFLTEP----EFADLVRQ 82 (85)
T ss_dssp SCBCHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHTC-SEEEEEETTEEEEEECG----GGHHHHHH
T ss_pred CCCCHHHHHHHHccCCCHHHHHHHHHHHHHHHhcCCC-cEEEEEECCEEEEEEhH----HHHHHHHH
Confidence 6799999999997 7888899888877753 22 12566667766665432 24455543
No 148
>d1yioa1 a.4.6.2 (A:131-200) Response regulatory protein StyR, C-terminal domain {Pseudomonas fluorescens [TaxId: 294]}
Probab=25.81 E-value=55 Score=20.32 Aligned_cols=35 Identities=9% Similarity=0.126 Sum_probs=26.9
Q ss_pred HHHHHhhhceeeHHHHHHHhCCCHHHHHHHHHhhh
Q psy4458 208 IRVMAKYYTRITLQRMCDLLGLPIEETEEFLSSMV 242 (303)
Q Consensus 208 i~~isk~Y~~Itl~~la~ll~ls~~~vE~~l~~mI 242 (303)
..++.-.-.-.+...||..+|+|+.-|+..+....
T Consensus 18 ~~vl~~l~~G~s~~eIA~~l~iS~~TV~~~~~~i~ 52 (70)
T d1yioa1 18 QQVLQLTIRGLMNKQIAGELGIAEVTVKVHRHNIM 52 (70)
T ss_dssp HHHHHHHTTTCCHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHCCCHHHHHHHHHHHH
Confidence 34444455667889999999999999998887654
No 149
>d1uxda_ a.35.1.5 (A:) Fructose repressor (FruR), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=25.32 E-value=21 Score=21.94 Aligned_cols=22 Identities=14% Similarity=0.327 Sum_probs=18.0
Q ss_pred eeHHHHHHHhCCCHHHHHHHHH
Q psy4458 218 ITLQRMCDLLGLPIEETEEFLS 239 (303)
Q Consensus 218 Itl~~la~ll~ls~~~vE~~l~ 239 (303)
|||..+|+..|+|+.-|=..|.
T Consensus 1 vTl~diA~~agvS~sTVSrvLn 22 (59)
T d1uxda_ 1 MKLDEIARLAGVSRTTASYVIN 22 (59)
T ss_dssp CCHHHHHHHHTSCTTHHHHHHH
T ss_pred CCHHHHHHHHCcCHHHHHHHHc
Confidence 6899999999999887655554
No 150
>d1v4ra1 a.4.5.6 (A:1-100) Transcriptional repressor TraR, N-terminal domain {Streptomyces sp. [TaxId: 1931]}
Probab=24.90 E-value=21 Score=24.30 Aligned_cols=47 Identities=6% Similarity=0.121 Sum_probs=39.0
Q ss_pred hhhcee-eHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEec
Q psy4458 213 KYYTRI-TLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFA 261 (303)
Q Consensus 213 k~Y~~I-tl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~ 261 (303)
++=..+ |...||+.||+|..-|-+-+..+..+|.|..+ +..|+..-.
T Consensus 28 ~~G~~LPs~r~La~~~~vSr~tvr~Al~~L~~~Gli~~~--~g~G~~V~~ 75 (100)
T d1v4ra1 28 APGDTLPSVADIRAQFGVAAKTVSRALAVLKSEGLVSSR--GALGTVVEK 75 (100)
T ss_dssp CTTSBCCCHHHHHHHSSSCTTHHHHHTTTTTTSSCCEEE--TTTEEESCS
T ss_pred CCcCCCccHHHHHHHHCCCHHHHHHHHHHHHHCCcEEEe--cCCEEEECC
Confidence 445788 89999999999999999999999999988765 556765443
No 151
>d1qzza1 a.4.5.29 (A:10-101) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}
Probab=24.26 E-value=38 Score=22.57 Aligned_cols=34 Identities=12% Similarity=0.111 Sum_probs=31.1
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEE
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITA 249 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~a 249 (303)
..+|.+.||..+|++++-++.++--+.+-|-+.-
T Consensus 39 gp~t~~eLA~~~g~~~~~l~rLlr~L~a~gll~~ 72 (92)
T d1qzza1 39 GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEG 72 (92)
T ss_dssp TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC
T ss_pred CCCCHHHHHHHHCcCchHHHHHHHHHHHCCCeee
Confidence 4689999999999999999999999999998764
No 152
>d2crua1 a.5.6.1 (A:8-112) Programmed cell death protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.80 E-value=12 Score=26.19 Aligned_cols=21 Identities=19% Similarity=0.377 Sum_probs=18.8
Q ss_pred HHHHHHHHhhhhcCceEEEec
Q psy4458 232 EETEEFLSSMVVSKTITAKID 252 (303)
Q Consensus 232 ~~vE~~l~~mI~~~~l~akID 252 (303)
..||..|..|...|+|.++|+
T Consensus 60 ~~VE~~liqlaq~G~i~~kis 80 (105)
T d2crua1 60 KAVENYLIQMARYGQLSEKVS 80 (105)
T ss_dssp HHHHHHHHHHHHHTCCCSCBC
T ss_pred HHHHHHHHHHHHcCCCCCCcC
Confidence 478999999999999999886
No 153
>d2ff4a2 a.118.8.3 (A:105-283) Probable regulatory protein EmbR, middle domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=23.35 E-value=97 Score=22.60 Aligned_cols=63 Identities=10% Similarity=-0.042 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhhcchhHHHHHHHHhhhhccCCCCcchHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHH
Q psy4458 30 EKVTLILEQMRLCLAKKDYIRTQIISKKINTKFFDDEKDDVQELKLKYYRLMIELDQHEGSYLATCKHYRAI 101 (303)
Q Consensus 30 ~k~~~~L~~~rL~L~~~D~~~a~~~~~ki~~~~~~~~~~~~~e~k~~y~~~~~~~~~~~~~f~eaa~~y~e~ 101 (303)
..++.+...+..++..|++..|-...+++-..-... -..+...++.+...+++-+|-+.|..+
T Consensus 65 ~~~~a~~~la~~~~~~g~~~~Al~~~~~al~~~P~~---------e~~~~~l~~al~~~Gr~~eAl~~y~~~ 127 (179)
T d2ff4a2 65 DKVLAHTAKAEAEIACGRASAVIAELEALTFEHPYR---------EPLWTQLITAYYLSDRQSDALGAYRRV 127 (179)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHSTTC---------HHHHHHHHHHHHTTTCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCchHHHHHHHHHHHhCCcc---------HHHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 456778889999999999999999999887654221 234445677778888888888888877
No 154
>d1st6a6 a.24.9.1 (A:647-718) Vinculin {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=23.02 E-value=19 Score=23.25 Aligned_cols=56 Identities=13% Similarity=0.286 Sum_probs=39.7
Q ss_pred HHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCCh------hHHHHHHHHHHHHHHHHHHHHH
Q psy4458 222 RMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDP------GEILNEWSASLNELMKLVNNTT 288 (303)
Q Consensus 222 ~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~------~~~l~~w~~~i~~l~~~v~~~~ 288 (303)
...+.+..+...+|.+.=+.|.-|++-+ ..|.++ ...-+.|.+++..|...|+.+.
T Consensus 10 ~~ve~i~~aa~qle~L~PQVi~AariL~-----------~~P~sK~a~En~e~~~~~W~~~v~~l~~~vDei~ 71 (72)
T d1st6a6 10 TTVEGIQATVKSARELTPQVVSAARILL-----------RNPGNQAAYEHFETMKNQWIDNVEKMTGLVDEAI 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT-----------TSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHCHHHHHHHHHHH-----------HCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 3445566667788888889998888644 444432 2346789999999999988654
No 155
>d1jjcb2 a.6.1.1 (B:400-474) Domains B1 and B5 of PheRS-beta, PheT {Thermus thermophilus [TaxId: 274]}
Probab=22.14 E-value=36 Score=21.73 Aligned_cols=60 Identities=15% Similarity=0.176 Sum_probs=37.0
Q ss_pred eeeHHHHHHHhCC--CHHHHHHHHHhhhhcCceEEEecCCCceEEeccCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q psy4458 217 RITLQRMCDLLGL--PIEETEEFLSSMVVSKTITAKIDRPAGIINFARNKDPGEILNEWSASLNELMKLVNNTTHL 290 (303)
Q Consensus 217 ~Itl~~la~ll~l--s~~~vE~~l~~mI~~~~l~akIDq~~giV~f~~~~~~~~~l~~w~~~i~~l~~~v~~~~~l 290 (303)
+++.+++.+++|+ +.+++.+.+.+|= .+++..++.+...-|. |..+|..-.+.++.+.++
T Consensus 6 ~l~~~~i~~~lG~~i~~~~i~~~L~~Lg------~~~~~~~~~~~V~vPs--------~R~Di~~~~DliEEi~R~ 67 (75)
T d1jjcb2 6 PFRPEYANRLLGTSYPEAEQIAILKRLG------CRVEGEGPTYRVTPPS--------HRLDLRLEEDLVEEVARI 67 (75)
T ss_dssp EECHHHHHHHHTCCCCHHHHHHHHHHTT------CEEECSSSSEEEECCT--------TCTTCCSHHHHHHHHHHH
T ss_pred EECHHHHHHHhCCCCCHHHHHHHHHHcC------CceEecCCcEEEecch--------hccccCCcchHHHHHHHH
Confidence 3567899999995 6788888888762 2333444445555443 444455555555555544
No 156
>d1e0ga_ d.7.1.1 (A:) Membrane-bound lytic murein transclycosylase D, MltD {Escherichia coli [TaxId: 562]}
Probab=22.06 E-value=32 Score=20.07 Aligned_cols=17 Identities=18% Similarity=0.360 Sum_probs=14.1
Q ss_pred eHHHHHHHhCCCHHHHH
Q psy4458 219 TLQRMCDLLGLPIEETE 235 (303)
Q Consensus 219 tl~~la~ll~ls~~~vE 235 (303)
|+..||+.+|+|++++-
T Consensus 12 Tl~~IA~~y~vs~~~i~ 28 (48)
T d1e0ga_ 12 SLSSIAKRHGVNIKDVM 28 (48)
T ss_dssp CHHHHHHHHTCCHHHHH
T ss_pred CHHHHHHHHCCCHHHHH
Confidence 67889999999988765
No 157
>d2dt5a1 a.4.5.38 (A:4-77) Transcriptional repressor Rex, N-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=22.05 E-value=46 Score=21.44 Aligned_cols=29 Identities=14% Similarity=0.067 Sum_probs=25.9
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhh
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVV 243 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~ 243 (303)
-..||=+.||+.+|+++.+|-+-++-+=.
T Consensus 23 ~~~vSS~~La~~~gi~~~qVRKDls~fG~ 51 (74)
T d2dt5a1 23 VHRTSSEQLGGLAQVTAFQVRKDLSYFGS 51 (74)
T ss_dssp CCEECHHHHHHHHTSCHHHHHHHHHHTTC
T ss_pred CeeEcHHHHHHHHCcCHHHHHHHHHHhcC
Confidence 57899999999999999999999988733
No 158
>d1r1ta_ a.4.5.5 (A:) SmtB repressor {Cyanobacteria (Synechococcus), pcc7942 [TaxId: 1129]}
Probab=21.84 E-value=88 Score=20.70 Aligned_cols=44 Identities=7% Similarity=0.194 Sum_probs=36.3
Q ss_pred ceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEec
Q psy4458 216 TRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFA 261 (303)
Q Consensus 216 ~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~ 261 (303)
...+...||+.+|+|..-+=..+..|-..|-+..+= ....+.+.
T Consensus 35 ~~~~v~ela~~l~is~stvS~HL~~L~~aglV~~~r--~G~~~~Y~ 78 (98)
T d1r1ta_ 35 SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRK--QGRHVYYQ 78 (98)
T ss_dssp CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE--ETTEEEEE
T ss_pred CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCceEEEE--ECCEEEEE
Confidence 457899999999999999999999999999998863 33444444
No 159
>d2hyec3 e.40.1.1 (C:403-675) Cullin-4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.29 E-value=59 Score=25.78 Aligned_cols=31 Identities=16% Similarity=0.162 Sum_probs=28.8
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcC
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSK 245 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~ 245 (303)
...+|++.|++.+|++.+++...+..|+..+
T Consensus 203 ~~~~t~~~i~~~~~i~~~~l~~~L~~L~~~k 233 (273)
T d2hyec3 203 GDGFSFEEIKMATGIEDSELRRTLQSLACGK 233 (273)
T ss_dssp CCCEEHHHHHHHTCCCHHHHHHHHHTTTTTT
T ss_pred CCCCcHHHHHHHHCcCHHHHHHHHHHHHhcc
Confidence 6899999999999999999999999998754
No 160
>d1f5ta2 a.76.1.1 (A:1065-1121) Diphtheria toxin repressor (DtxR) {Corynebacterium diphtheriae [TaxId: 1717]}
Probab=21.14 E-value=23 Score=21.43 Aligned_cols=20 Identities=20% Similarity=0.396 Sum_probs=16.2
Q ss_pred HHHHHhCCCHHHHHHHHHhh
Q psy4458 222 RMCDLLGLPIEETEEFLSSM 241 (303)
Q Consensus 222 ~la~ll~ls~~~vE~~l~~m 241 (303)
.|.+.+|+|+++++...+.|
T Consensus 21 fL~~~lgv~~~~a~~~A~~i 40 (57)
T d1f5ta2 21 LLTDIIGLDINKVHDEADRW 40 (57)
T ss_dssp HHHTTSCCCGGGHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHH
Confidence 46678999999998887765
No 161
>d1x2ma1 a.4.1.1 (A:8-59) Lag1 longevity assurance homolog 6, LASS6 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=21.05 E-value=29 Score=20.60 Aligned_cols=22 Identities=9% Similarity=0.145 Sum_probs=17.0
Q ss_pred hceeeHHHHHHHhCCCHHHHHH
Q psy4458 215 YTRITLQRMCDLLGLPIEETEE 236 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~ 236 (303)
=+.-..+.||..+|+++..|..
T Consensus 19 P~~~~~~~LA~~~~ls~~qV~~ 40 (52)
T d1x2ma1 19 PDEKRLEGLSKQLDWDVRSIQR 40 (52)
T ss_dssp CCHHHHHHHHHHHCSCHHHHHH
T ss_pred cCHHHHHHHHHHHCcCHHHHHH
Confidence 3445678899999999988753
No 162
>d2f2ea1 a.4.5.69 (A:5-146) Hypothetical protein PA1607 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=20.76 E-value=1.1e+02 Score=21.90 Aligned_cols=47 Identities=13% Similarity=0.071 Sum_probs=36.6
Q ss_pred hceeeHHHHHHHhCCCHHHHHHHHHhhhhcCceEEEecCCCceEEec
Q psy4458 215 YTRITLQRMCDLLGLPIEETEEFLSSMVVSKTITAKIDRPAGIINFA 261 (303)
Q Consensus 215 Y~~Itl~~la~ll~ls~~~vE~~l~~mI~~~~l~akIDq~~giV~f~ 261 (303)
.-..+|+.|.+.+|+|+.-+-.-|..|...|-+.-..++...-+++.
T Consensus 31 ~G~~rf~el~~~lgis~~vLs~rL~~L~~~gLv~r~~~~~p~r~~Y~ 77 (142)
T d2f2ea1 31 EGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYR 77 (142)
T ss_dssp TTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEE
T ss_pred cCCCCHHHHHHHhhccHHHHHHHHHHHHHhcceeeecCCCCCeeEEe
Confidence 67788999999999999999999999999998864333332334444
No 163
>d2esha1 a.4.5.61 (A:4-117) Hypothetical protein TM0937 {Thermotoga maritima [TaxId: 2336]}
Probab=20.62 E-value=1.2e+02 Score=20.51 Aligned_cols=64 Identities=13% Similarity=0.066 Sum_probs=44.7
Q ss_pred CCCHHHHHHHHHhhhhcCceEEEecCCCce--EEeccCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4458 228 GLPIEETEEFLSSMVVSKTITAKIDRPAGI--INFARNKDPGEILNEWSASLNELMKLVNNTTHLI 291 (303)
Q Consensus 228 ~ls~~~vE~~l~~mI~~~~l~akIDq~~gi--V~f~~~~~~~~~l~~w~~~i~~l~~~v~~~~~lI 291 (303)
.+++--+=..|.+|-.+|-|.+..+..+|- ..+.=.+.-.+.+.+|.+.+..+.+.++.+-.-+
T Consensus 43 ~~~~gtiY~~L~rLe~~G~I~~~~~~~~g~~rk~Y~IT~~G~~~l~~~~~~~~~~~~~~~~l~~~~ 108 (114)
T d2esha1 43 IGHMGNIYRVLADLEESGFLSTEWDTTVSPPRKIYRITPQGKLYLREILRSLEDMKRRIETLEERI 108 (114)
T ss_dssp CCCCCCHHHHHHHHHHTTSEEEEEECSSSSCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCcHHHHHHHHHHCCCeEEEeecCCCCCcEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345667888999999999999887766652 2233222234678888888888888887655443
No 164
>d1wi6a1 d.58.7.1 (A:69-143) Ribonucleoprotein PTB-binding 1, Raver-1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.31 E-value=32 Score=21.62 Aligned_cols=37 Identities=14% Similarity=0.262 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHhhhhcCceEEEecCCCce--EEeccCCChh
Q psy4458 228 GLPIEETEEFLSSMVVSKTITAKIDRPAGI--INFARNKDPG 267 (303)
Q Consensus 228 ~ls~~~vE~~l~~mI~~~~l~akIDq~~gi--V~f~~~~~~~ 267 (303)
+++.+++.....+. |-...++++..|. |+|..+.++.
T Consensus 9 ~~t~~~l~~~F~~~---g~~~~~~~~~~g~afv~f~~~~~A~ 47 (75)
T d1wi6a1 9 DVTNQEVHDLLSDY---ELKYCFVDKYKGTAFVTLLNGEQAE 47 (75)
T ss_dssp TCCHHHHHHHTTTS---CEEEEEEETTTTEEEEEESSHHHHH
T ss_pred cCCHHHHHHHHhcc---cccceeecccceeEEEEECCHHHHH
Confidence 45566666655554 5567788888887 7888664443
Done!