Query psy4459
Match_columns 400
No_of_seqs 149 out of 527
Neff 4.3
Searched_HMMs 29240
Date Fri Aug 16 17:36:58 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4459.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4459hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1rlz_A DHS, deoxyhypusine synt 100.0 1E-100 4E-105 764.4 19.8 283 4-373 73-356 (369)
2 1rlz_A DHS, deoxyhypusine synt 99.6 1.4E-16 5E-21 159.4 -2.5 103 175-301 230-335 (369)
3 3c2q_A Uncharacterized conserv 96.1 0.029 9.8E-07 55.9 10.6 136 26-215 134-271 (345)
4 1mvl_A PPC decarboxylase athal 56.9 8.8 0.0003 35.4 4.0 40 26-65 18-57 (209)
5 2g2c_A Putative molybdenum cof 45.8 12 0.00041 32.6 2.9 24 41-65 56-79 (167)
6 1dek_A Deoxynucleoside monopho 45.0 81 0.0028 29.2 8.6 44 30-76 2-46 (241)
7 1mkz_A Molybdenum cofactor bio 41.6 16 0.00054 32.1 3.0 25 41-65 55-79 (172)
8 3lqk_A Dipicolinate synthase s 41.4 25 0.00086 32.0 4.4 39 27-65 7-47 (201)
9 1uuy_A CNX1, molybdopterin bio 40.4 17 0.00058 31.6 3.0 25 41-65 57-81 (167)
10 2is8_A Molybdopterin biosynthe 40.2 17 0.00058 31.5 3.0 25 41-65 48-72 (164)
11 1y5e_A Molybdenum cofactor bio 38.1 18 0.00061 31.5 2.7 25 41-65 58-82 (169)
12 1ceu_A Protein (HIV-1 regulato 37.6 19 0.00065 26.8 2.3 32 124-159 15-46 (51)
13 2pbq_A Molybdenum cofactor bio 35.9 22 0.00074 31.4 3.0 37 25-65 39-78 (178)
14 2pjk_A 178AA long hypothetical 35.7 21 0.0007 31.7 2.8 25 41-65 67-91 (178)
15 3kbq_A Protein TA0487; structu 35.5 19 0.00064 32.2 2.5 23 41-65 50-72 (172)
16 1di6_A MOGA, molybdenum cofact 35.1 23 0.00078 32.0 3.0 25 41-65 52-76 (195)
17 1jlj_A Gephyrin; globular alph 34.7 23 0.00078 31.7 3.0 25 41-65 64-88 (189)
18 3iwt_A 178AA long hypothetical 34.7 22 0.00075 30.8 2.8 23 43-65 69-91 (178)
19 3mcu_A Dipicolinate synthase, 34.4 40 0.0014 30.9 4.6 39 27-65 5-45 (207)
20 3bpq_A Antitoxin RELB3, RELB; 34.0 32 0.0011 25.7 3.1 45 110-156 6-51 (52)
21 3qjg_A Epidermin biosynthesis 31.5 39 0.0013 30.2 3.9 48 28-75 6-56 (175)
22 1g63_A Epidermin modifying enz 30.9 36 0.0012 30.4 3.6 38 28-65 3-41 (181)
23 1p3y_1 MRSD protein; flavoprot 29.7 26 0.00089 31.7 2.5 39 27-65 8-47 (194)
24 1qzu_A Hypothetical protein MD 29.2 38 0.0013 30.9 3.5 41 25-65 17-59 (206)
25 1g8l_A Molybdopterin biosynthe 28.7 51 0.0018 33.0 4.6 81 41-137 231-321 (411)
26 3rfq_A Pterin-4-alpha-carbinol 26.3 38 0.0013 30.4 2.9 24 41-65 76-99 (185)
27 3pzy_A MOG; ssgcid, seattle st 25.1 43 0.0015 29.2 2.9 24 41-65 53-76 (164)
28 2ejb_A Probable aromatic acid 23.6 44 0.0015 30.1 2.7 37 29-65 3-40 (189)
29 1sbz_A Probable aromatic acid 22.9 42 0.0014 30.5 2.5 37 29-65 2-40 (197)
30 3zqu_A Probable aromatic acid 20.5 53 0.0018 30.1 2.7 38 28-65 5-43 (209)
No 1
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A*
Probab=100.00 E-value=1.1e-100 Score=764.39 Aligned_cols=283 Identities=63% Similarity=1.053 Sum_probs=257.2
Q ss_pred ccCCCCCCccCcccc-hhhhhccCCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCchhHHHHHhhcCcccccc
Q psy4459 4 RRLDLPEDKIDTYEE-DLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDF 82 (400)
Q Consensus 4 ~~~~~~~~~~~~~~~-~~~~~~~~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~lehDi~~~~~~~y~g~~ 82 (400)
|..+.+|+. ++.++ +++.|++.+|||||||||||+|||||++|++|||+|+||||||||||||||++||+++||+|+|
T Consensus 73 r~~~~~~~~-~~~~~~d~~~~~~~~~tIFLg~tgnmissGlR~iI~~Li~~~~VDvIVTTgggiehD~ik~lg~~y~G~f 151 (369)
T 1rlz_A 73 KLEPLSQDE-DQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLVTTAGGVEEDLIKCLAPTYLGEF 151 (369)
T ss_dssp HTCCC------------------CSSEEEEEECTHHHHSTHHHHHHHHHHTTCCSEEEECHHHHHHHHHTTTSCCEECCT
T ss_pred hccCccccc-cccccccchhcccCCCeEEEEccccccchhHHHHHHHHHHcCCeeEEEccCCchHHHHHHHhccceecCC
Confidence 445555443 44455 7788999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCchhHHhcCccccccCCCCCCCCCCcccceeecCccHHHHHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhcccCCC
Q psy4459 83 QLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHE 162 (400)
Q Consensus 83 ~~dd~~L~~~ginRi~~~~~~~~~~~~~~~d~~ip~e~~~~~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i~~e 162 (400)
.+||.+||++|+|||| |++|||++||+||+||+++|++|.++|++.+.+|||+||+++|||+|+++
T Consensus 152 ~~dd~~Lr~~ginRIg--------------n~~ip~e~y~~~E~~i~~i~~~~~~~q~~~~~~~s~~e~i~~lGk~i~~e 217 (369)
T 1rlz_A 152 SLRGKELRENGINRIG--------------NLLVPNENYCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNP 217 (369)
T ss_dssp TCCHHHHHHTTEEEET--------------TEEEETHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHCCT
T ss_pred CCChHHHHHcCCCccc--------------ceeeccHHHHHHHHHHHHHHHHHHHhhhccCCcCcHHHHHHHHhhhcCCC
Confidence 9999999999999999 99999999999999999999999998887788999999999999999887
Q ss_pred ccHhHhhhhcCCCccCCCccCCCccccceeecccCCCchhHHHHHHHHHhHhhhhccccceeeecCcccCCCchHhhHhh
Q psy4459 163 DSICYWAAHNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAA 242 (400)
Q Consensus 163 ~Sil~wAyk~~vPif~Pa~~D~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~~~s~~~~~i~~~G~~i~~e~Sil~~A~ 242 (400)
+||+|||||
T Consensus 218 ~Sil~~Ayk----------------------------------------------------------------------- 226 (369)
T 1rlz_A 218 ESVYYWAQK----------------------------------------------------------------------- 226 (369)
T ss_dssp TCHHHHHHH-----------------------------------------------------------------------
T ss_pred CcHHHHHHH-----------------------------------------------------------------------
Confidence 777777766
Q ss_pred hCCCceecCCCCchhHhHHHHHhhhcCCcceeeHHHHHHHHHHHHhhcccceeEEecCccchhhhhhhcccccCcceEEE
Q psy4459 243 HNHIPIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADYAVF 322 (400)
Q Consensus 243 k~~vPVf~Pa~~DgsiG~~l~~~~~~~~~l~~D~~~D~~~l~~~~~~s~~~G~iilGGGv~Kh~i~~a~l~r~g~dyav~ 322 (400)
|||||||||++|||+|+++|+|++++|++.+|+++|+++|++++++|+++|+|||||||||||||||||||+|+|||||
T Consensus 227 -~~VPVf~Pa~tDgsiG~~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a~ktG~iilGGGvpKh~i~~a~l~r~G~dyaV~ 305 (369)
T 1rlz_A 227 -NHIPVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVY 305 (369)
T ss_dssp -TTCCEECTTTTSSHHHHHHHHHHHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHTTTSBSEEEE
T ss_pred -cCCCEECCCcchhhHHHHHHHHhccCCceeeehHhhHHHHHHHHHhcccceEEEECCCcchHHHHhhhcccCCCCEEEE
Confidence 8999999999999999999999999989999999999999999999999999999999999999999999999999999
Q ss_pred eccCCcccCCcCCCChhhhhhhcccccCCCCeEEeccceeEeecccccccC
Q psy4459 323 INTGVEYDGSDSGARPDEAKSWGKIKREARPVKRNGADYAVFINTGVEYDG 373 (400)
Q Consensus 323 itta~e~dGs~SGA~p~EaisWGKik~~~~~v~V~gDaTiv~Pll~~~~~g 373 (400)
|||++|+|||||||||+||||||||+++++.|+|||||||+|||++++++.
T Consensus 306 Itta~e~dGslSGA~p~EAvSWGKi~~~a~~v~V~~DATIv~PLlva~~~~ 356 (369)
T 1rlz_A 306 INTAQEFDGSDSGARPDEAVSWGKIRVDAQPVKVYADASLVFPLLVAETFA 356 (369)
T ss_dssp EECCCSTTCCSTTCCHHHHHHHTSBCTTCCCEEEESCHHHHHHHHHHHTGG
T ss_pred EecCCCCcCcccCCChhhhhccccccCCCCeEEEEEeehHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998883
No 2
>1rlz_A DHS, deoxyhypusine synthase; rossman fold, NAD cofactor, spermid transferase; HET: NAD; 2.15A {Homo sapiens} SCOP: c.31.1.1 PDB: 1roz_A* 1rqd_A* 1dhs_A*
Probab=99.55 E-value=1.4e-16 Score=159.39 Aligned_cols=103 Identities=47% Similarity=0.733 Sum_probs=83.9
Q ss_pred CccCCCccCCCccccceeecccCCCchhHHHHHHHHHhHhhhhccccceeeecCcccCCCchH-hhHhhhCCCceecC--
Q psy4459 175 PIFSPALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSI-CYWAAHNHIPIFSP-- 251 (400)
Q Consensus 175 Pif~Pa~~D~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~~~s~~~~~i~~~G~~i~~e~Si-l~~A~k~~vPVf~P-- 251 (400)
|||||||+|||+|+++|+|++++|.+.+|+++|+++||.++++|.++|+|++|||.+||+..+ .......+--||+.
T Consensus 230 PVf~Pa~tDgsiG~~l~~~~~~~~~l~iD~v~Di~~l~~~~~~a~ktG~iilGGGvpKh~i~~a~l~r~G~dyaV~Itta 309 (369)
T 1rlz_A 230 PVFSPALTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADYAVYINTA 309 (369)
T ss_dssp CEECTTTTSSHHHHHHHHHHHHSTTCCCCSHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHTTTSBSEEEEEECC
T ss_pred CEECCCcchhhHHHHHHHHhccCCceeeehHhhHHHHHHHHHhcccceEEEECCCcchHHHHhhhcccCCCCEEEEEecC
Confidence 899999999999999999999999999999999999999999999999999999999987633 22222334455544
Q ss_pred CCCchhHhHHHHHhhhcCCcceeeHHHHHHHHHHHHhhcccceeEEecCc
Q psy4459 252 ALTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGG 301 (400)
Q Consensus 252 a~~DgsiG~~l~~~~~~~~~l~~D~~~D~~~l~~~~~~s~~~G~iilGGG 301 (400)
...||| ..|.++| +|++||.|-...-
T Consensus 310 ~e~dGs-----------lSGA~p~-------------EAvSWGKi~~~a~ 335 (369)
T 1rlz_A 310 QEFDGS-----------DSGARPD-------------EAVSWGKIRVDAQ 335 (369)
T ss_dssp CSTTCC-----------STTCCHH-------------HHHHHTSBCTTCC
T ss_pred CCCcCc-----------ccCCChh-------------hhhccccccCCCC
Confidence 566777 4577777 7889998855443
No 3
>3c2q_A Uncharacterized conserved protein; putative LOR/SDH, structural genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis S2}
Probab=96.13 E-value=0.029 Score=55.89 Aligned_cols=136 Identities=16% Similarity=0.227 Sum_probs=92.5
Q ss_pred CCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCchhHHHHHhhcCcccccccCCchhHHhcCccccccCCCCCC
Q psy4459 26 HNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGK 105 (400)
Q Consensus 26 ~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~lehDi~~~~~~~y~g~~~~dd~~L~~~ginRi~~~~~~~~ 105 (400)
.+.+|.+..-=+.+-+|-|..++.|||+||||++..==|--.|||=.+|=.+=.| .+=-.
T Consensus 134 ~gG~Iv~V~GPAvvhtga~~ala~LIr~GYV~~LlaGNAlAtHDiE~~l~gTsLG-------------~di~t------- 193 (345)
T 3c2q_A 134 GTGGIAIVGGPAIIHTGGGPALAKMVELGYIQAILAGNALATHDIESALYGTSLG-------------VNIKT------- 193 (345)
T ss_dssp SSCCEEEEECTHHHHTTCHHHHHHHHHTTCCSEEEEEHHHHHHHHHHHHHSEETT-------------EETTT-------
T ss_pred CCCeEEEEecCeEecCCcHHHHHHHHHcCccceEeccchHhHhhHHHHhhccccC-------------ccccc-------
Confidence 6788888888888899999999999999999999976666899999987433332 11011
Q ss_pred CCCCcccceeecCccHHHHHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhcccCCCccHhHhhhhcCCCccC-CCcc-C
Q psy4459 106 KGSHVSKVHAVPNDNYCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFS-PALT-D 183 (400)
Q Consensus 106 ~~~~~~~d~~ip~e~~~~~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i~~e~Sil~wAyk~~vPif~-Pa~~-D 183 (400)
-..+|..+|.+++ .++++.+. | |..+++. +-.=++.|.|.|.||+||..- =++- |
T Consensus 194 -------~~~v~~GH~~Hl~-----~IN~irr~----G---SI~~aVe----~G~l~~GImy~cvk~~VPfVLAGSIRDD 250 (345)
T 3c2q_A 194 -------AKPVTGGHKHHIY-----AINAINDA----G---NIKNAVE----SGVLKEGIMYQCIKNNIPYVLAGSIRDD 250 (345)
T ss_dssp -------CCBCTTGGGHHHH-----HHHHHHHH----S---SHHHHHH----TTSCCSSHHHHHHHTTCCEEEECCTTCS
T ss_pred -------cccCCCchHHHHH-----HHHHHHHc----C---CHHHHHH----hCCCccchHHHHHhCCCCEEEEeeccCC
Confidence 3456777877664 34444221 1 2333433 333458999999999999652 2222 4
Q ss_pred CCccccceeecccCCCchhHHHHHHHHHhHhh
Q psy4459 184 GSLGDMMYFHSFRNPGLICDILQDLRRLNTMA 215 (400)
Q Consensus 184 ~s~g~~l~~~~~~~~~l~iD~~~d~~~l~~~~ 215 (400)
| ..|+++-|..+.-+++.+..
T Consensus 251 G-----------PLPdvitdv~~AQ~~mr~~~ 271 (345)
T 3c2q_A 251 G-----------PIPDVITDSMVAQDKMRTTV 271 (345)
T ss_dssp S-----------CCTTCBCBHHHHHHHHHHHH
T ss_pred C-----------CCCcccccHHHHHHHHHHHh
Confidence 4 34799999988655555543
No 4
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=56.87 E-value=8.8 Score=35.40 Aligned_cols=40 Identities=13% Similarity=0.144 Sum_probs=34.9
Q ss_pred CCceEEEecccccchhhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 26 HNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 26 ~~~~ifl~~tgnm~~aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.+.+|.|++||+.-.--.-++++.|.++|-|++|+|-+|.
T Consensus 18 ~~k~IllgvTGsiaa~k~~~ll~~L~~~g~V~vv~T~~A~ 57 (209)
T 1mvl_A 18 RKPRVLLAASGSVAAIKFGNLCHCFTEWAEVRAVVTKSSL 57 (209)
T ss_dssp -CCEEEEEECSSGGGGGHHHHHHHHHTTSEEEEEECTGGG
T ss_pred CCCEEEEEEeCcHHHHHHHHHHHHHhcCCCEEEEEcchHH
Confidence 3568999999999888888999999999999999998875
No 5
>2g2c_A Putative molybdenum cofactor biosynthesis protein; structural genomics, PSI, protein structure initiative; 1.50A {Corynebacterium diphtheriae} SCOP: c.57.1.1
Probab=45.80 E-value=12 Score=32.59 Aligned_cols=24 Identities=25% Similarity=0.311 Sum_probs=19.1
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+++++ .|+||||||.
T Consensus 56 ~~I~~~l~~a~~~~-~DlVittGG~ 79 (167)
T 2g2c_A 56 DTVVEAIATALKQG-ARFIITAGGT 79 (167)
T ss_dssp HHHHHHHHHHHHTT-CSEEEEESCC
T ss_pred HHHHHHHHHHHhCC-CCEEEECCCC
Confidence 34677788877755 8999999997
No 6
>1dek_A Deoxynucleoside monophosphate kinase; transferase, phosphotransferase; HET: DGP; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1 PDB: 1del_A*
Probab=45.04 E-value=81 Score=29.17 Aligned_cols=44 Identities=18% Similarity=0.221 Sum_probs=33.0
Q ss_pred EEEecccccchhhhHHHHHHHHH-cCCccEEEeCCCchhHHHHHhhcC
Q psy4459 30 IFLGYTSNMVSSGVRETIKFLVQ-HKLVDAIVTTAGGVEEDLIKCLAP 76 (400)
Q Consensus 30 ifl~~tgnm~~aGlr~~i~~Li~-~~~Vd~iVtTgg~lehDi~~~~~~ 76 (400)
+.+++|| +..||=-.+-+.|.+ .|+. ++.-|..+.+-+.+.++.
T Consensus 2 ~~i~ltG-~~~sGK~tv~~~l~~~~g~~--~~~~~~~~~~~~~~~~g~ 46 (241)
T 1dek_A 2 KLIFLSG-VKRSGKDTTADFIMSNYSAV--KYQLAGPIKDALAYAWGV 46 (241)
T ss_dssp EEEEEEC-CTTSSHHHHHHHHHHHSCEE--ECCTTHHHHHHHHHHHHH
T ss_pred eEEEEEC-CCCCCHHHHHHHHHHhcCCe--EEecChHHHHHHHHHccc
Confidence 4688898 477777777777777 4754 577788888889988873
No 7
>1mkz_A Molybdenum cofactor biosynthesis protein B; MAD, WEAK anomalous signal, molybdopterin synthesis, structural genomics, PSI; HET: MSE; 1.60A {Escherichia coli} SCOP: c.57.1.1 PDB: 1r2k_B
Probab=41.65 E-value=16 Score=32.09 Aligned_cols=25 Identities=16% Similarity=0.308 Sum_probs=20.3
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+++++-.|+||||||.
T Consensus 55 ~~i~~~l~~a~~~~~~DlVittGG~ 79 (172)
T 1mkz_A 55 YAIRAQVSAWIASDDVQVVLITGGT 79 (172)
T ss_dssp HHHHHHHHHHHHSSSCCEEEEESCC
T ss_pred HHHHHHHHHHHhcCCCCEEEeCCCC
Confidence 4567788888887668999999997
No 8
>3lqk_A Dipicolinate synthase subunit B; flavoprotein, PSI2, MCSG, structural protein structure initiative, midwest center for structural genomics; 2.10A {Bacillus halodurans}
Probab=41.38 E-value=25 Score=32.04 Aligned_cols=39 Identities=21% Similarity=0.146 Sum_probs=32.1
Q ss_pred CceEEEecccccchh-hhHHHHHHHHHcC-CccEEEeCCCc
Q psy4459 27 NCTIFLGYTSNMVSS-GVRETIKFLVQHK-LVDAIVTTAGG 65 (400)
Q Consensus 27 ~~~ifl~~tgnm~~a-Glr~~i~~Li~~~-~Vd~iVtTgg~ 65 (400)
+.+|.|++||+.-.- -.-++++.|.++| -|++|+|.+|-
T Consensus 7 ~k~I~lgiTGs~aa~~k~~~ll~~L~~~g~eV~vv~T~~A~ 47 (201)
T 3lqk_A 7 GKHVGFGLTGSHCTYHEVLPQMERLVELGAKVTPFVTHTVQ 47 (201)
T ss_dssp TCEEEEECCSCGGGGGGTHHHHHHHHHTTCEEEEECSSCSC
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHhhCCCEEEEEEChhHH
Confidence 468999999996655 5668999999998 48889988875
No 9
>1uuy_A CNX1, molybdopterin biosynthesis CNX1; chelatase, molybdenum cofactor biosynthesis; HET: MTE AMP; 1.45A {Arabidopsis thaliana} SCOP: c.57.1.1 PDB: 1o8q_A 1o8n_A 1o8o_A 1uux_A* 1eav_A
Probab=40.43 E-value=17 Score=31.57 Aligned_cols=25 Identities=16% Similarity=0.283 Sum_probs=19.4
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+++..-.|+||||||.
T Consensus 57 ~~i~~~l~~~~~~~~~DlVittGG~ 81 (167)
T 1uuy_A 57 ERIKDILQKWSDVDEMDLILTLGGT 81 (167)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3467777777765568999999987
No 10
>2is8_A Molybdopterin biosynthesis enzyme, MOAB; globular alpha/beta fold, structu genomics, NPPSFA; 1.64A {Thermus thermophilus} PDB: 3mch_A
Probab=40.24 E-value=17 Score=31.51 Aligned_cols=25 Identities=16% Similarity=0.391 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.++++.-.|+||||||.
T Consensus 48 ~~i~~~l~~~~~~~~~DlVittGG~ 72 (164)
T 2is8_A 48 PMIKKVLRLWADREGLDLILTNGGT 72 (164)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4577788888875458999999996
No 11
>1y5e_A Molybdenum cofactor biosynthesis protein B; structural genomics, protein structure initiative, PSI, MCSG, midwest center for structural genomics; 1.90A {Bacillus cereus} SCOP: c.57.1.1
Probab=38.07 E-value=18 Score=31.53 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+++..-.|+||||||.
T Consensus 58 ~~i~~~l~~~~~~~~~DlVittGG~ 82 (169)
T 1y5e_A 58 ESIQQAVLAGYHKEDVDVVLTNGGT 82 (169)
T ss_dssp HHHHHHHHHHHTCTTCSEEEEECCC
T ss_pred HHHHHHHHHHHhcCCCCEEEEcCCC
Confidence 4567778887775568999999987
No 12
>1ceu_A Protein (HIV-1 regulatory protein N-terminal domain VPR); helical domain, amphipaticity, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1fi0_A
Probab=37.59 E-value=19 Score=26.82 Aligned_cols=32 Identities=19% Similarity=0.509 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhhhcCCccchHHHHHHHhccc
Q psy4459 124 FENWLMPILDTMLREQKETGTVWTPSRIISRLGMEI 159 (400)
Q Consensus 124 ~E~~l~~il~~~~~~q~~~~~~~t~~e~~~~lGk~i 159 (400)
+..|+.++|+++-+ +..+-+|++++..||..|
T Consensus 15 ~~eW~le~LeElk~----EAvrHFpr~~L~~lgqyi 46 (51)
T 1ceu_A 15 YNDWTLELLEELKN----EAVRHFPRIWLHSLGQHI 46 (51)
T ss_dssp TSHHHHHHHHHHHH----HTTTSCHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHH----HHHHhCCHHHHHHHHHHH
Confidence 46899999999843 355689999999999864
No 13
>2pbq_A Molybdenum cofactor biosynthesis MOG; molybdopterin, MPT, structural genomics, NPPSFA, national PR protein structural and functional analyses; 1.70A {Aquifex aeolicus} PDB: 2qq1_A 3mci_A 3mcj_A 3k6a_A* 2f7w_A 2f7y_A 2fuw_A
Probab=35.93 E-value=22 Score=31.38 Aligned_cols=37 Identities=19% Similarity=0.178 Sum_probs=24.5
Q ss_pred cCCceEEEecccccch---hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 25 KHNCTIFLGYTSNMVS---SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 25 ~~~~~ifl~~tgnm~~---aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
..++.+... .++ .-+++.|+.+++..-.|+||||||.
T Consensus 39 ~~G~~v~~~----iv~Dd~~~I~~~l~~~~~~~~~DlVittGG~ 78 (178)
T 2pbq_A 39 ITPFEVEYR----VIPDERDLIEKTLIELADEKGCSLILTTGGT 78 (178)
T ss_dssp CSCCEEEEE----EECSCHHHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred hCCCEEEEE----EcCCCHHHHHHHHHHHHhcCCCCEEEECCCC
Confidence 456665222 444 3466777777775458999999995
No 14
>2pjk_A 178AA long hypothetical molybdenum cofactor biosynthesis protein B; 3D-structure, structural genomics, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii} PDB: 3iwt_A*
Probab=35.67 E-value=21 Score=31.68 Aligned_cols=25 Identities=20% Similarity=0.242 Sum_probs=19.4
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.++++.-.|+||||||.
T Consensus 67 ~~I~~al~~a~~~~~~DlVittGG~ 91 (178)
T 2pjk_A 67 IKILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp HHHHHHHHHHHTCTTCCEEEEESCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 4466777777776558999999996
No 15
>3kbq_A Protein TA0487; structural genomics, CINA, protein structure initiative, MCS midwest center for structural genomics, unknown function; 2.00A {Thermoplasma acidophilum}
Probab=35.51 E-value=19 Score=32.23 Aligned_cols=23 Identities=13% Similarity=0.247 Sum_probs=18.7
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+.++ .|+||||||.
T Consensus 50 ~~I~~~l~~a~~~--~DlVittGG~ 72 (172)
T 3kbq_A 50 DEIGWAFRVALEV--SDLVVSSGGL 72 (172)
T ss_dssp HHHHHHHHHHHHH--CSEEEEESCC
T ss_pred HHHHHHHHHHHhc--CCEEEEcCCC
Confidence 4577778887776 8999999986
No 16
>1di6_A MOGA, molybdenum cofactor biosynthetic enzyme; MOCO, MOCO biosynthesis, gephyrin function; 1.45A {Escherichia coli} SCOP: c.57.1.1 PDB: 1di7_A
Probab=35.08 E-value=23 Score=32.04 Aligned_cols=25 Identities=24% Similarity=0.278 Sum_probs=20.0
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.++++.-.|+|+||||.
T Consensus 52 ~~I~~al~~a~~~~~~DlVitTGGt 76 (195)
T 1di6_A 52 AIIEQTLCELVDEMSCHLVLTTGGT 76 (195)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHHhcCCCCEEEECCCC
Confidence 3467778888876668999999997
No 17
>1jlj_A Gephyrin; globular alpha/beta fold, structural protein; 1.60A {Homo sapiens} SCOP: c.57.1.1 PDB: 1ihc_A
Probab=34.73 E-value=23 Score=31.73 Aligned_cols=25 Identities=28% Similarity=0.376 Sum_probs=19.8
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.++++.-.|+||||||.
T Consensus 64 ~~I~~al~~a~~~~~~DlVIttGGt 88 (189)
T 1jlj_A 64 EEIKETLIDWCDEKELNLILTTGGT 88 (189)
T ss_dssp HHHHHHHHHHHHTSCCSEEEEESCC
T ss_pred HHHHHHHHHHhhcCCCCEEEEcCCC
Confidence 4567778777775568999999996
No 18
>3iwt_A 178AA long hypothetical molybdenum cofactor biosy protein B; biosynthesis, structural genomics, UNKN function, NPPSFA; HET: PEG; 1.90A {Sulfolobus tokodaii}
Probab=34.73 E-value=22 Score=30.83 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=17.7
Q ss_pred hHHHHHHHHHcCCccEEEeCCCc
Q psy4459 43 VRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 43 lr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
+++.++.+...+-.|+|+||||.
T Consensus 69 i~~al~~~~a~~~~DlVittGG~ 91 (178)
T 3iwt_A 69 ILKAFTDALSIDEVDVIISTGGT 91 (178)
T ss_dssp HHHHHHHHHTCTTCCEEEEESCC
T ss_pred HHHHHHHHHhcCCCCEEEecCCc
Confidence 45556666666779999999997
No 19
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=34.38 E-value=40 Score=30.94 Aligned_cols=39 Identities=18% Similarity=0.190 Sum_probs=29.1
Q ss_pred CceEEEecccccchhh-hHHHHHHHHHcC-CccEEEeCCCc
Q psy4459 27 NCTIFLGYTSNMVSSG-VRETIKFLVQHK-LVDAIVTTAGG 65 (400)
Q Consensus 27 ~~~ifl~~tgnm~~aG-lr~~i~~Li~~~-~Vd~iVtTgg~ 65 (400)
+.+|.|++||+...-- .-++++.|.+.| -|++|+|-+|.
T Consensus 5 ~k~IllgiTGsiaayk~~~~ll~~L~~~g~eV~vv~T~~A~ 45 (207)
T 3mcu_A 5 GKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQ 45 (207)
T ss_dssp TCEEEEEECSCGGGGTTSHHHHHHHHHTTCEEEEEECC---
T ss_pred CCEEEEEEEChHHHHHHHHHHHHHHHhCCCEEEEEEehHHH
Confidence 4689999999854443 568999999998 48889998886
No 20
>3bpq_A Antitoxin RELB3, RELB; protein toxin-antitoxin complex; 2.20A {Methanocaldococcus jannaschii}
Probab=34.01 E-value=32 Score=25.66 Aligned_cols=45 Identities=24% Similarity=0.240 Sum_probs=29.0
Q ss_pred cccceeecCccHHHHHHHHHH-HHHHHHHHhhhcCCccchHHHHHHHh
Q psy4459 110 VSKVHAVPNDNYCAFENWLMP-ILDTMLREQKETGTVWTPSRIISRLG 156 (400)
Q Consensus 110 ~~~d~~ip~e~~~~~E~~l~~-il~~~~~~q~~~~~~~t~~e~~~~lG 156 (400)
|+.-+++|-+.|.++|.+... +...| ++-+ ...+++.++....||
T Consensus 6 ~i~kvii~~~~fekieEiED~GL~kaM-~Ev~-dee~L~~eeA~~~L~ 51 (52)
T 3bpq_A 6 RFKKFFISRKEYEKIEEILDIGLAKAM-EETK-DDELLTYDEIKELLG 51 (52)
T ss_dssp --CCCEECHHHHHHHHHHHHHHHHHHH-HTTT-TCCEECHHHHHC---
T ss_pred hhHhheecHHHHHHHHHHHHHHHHHHH-HHhc-CCccCCHHHHHHHhc
Confidence 344999999999999999443 44444 4432 466788888877766
No 21
>3qjg_A Epidermin biosynthesis protein EPID; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; HET: FMN; 2.04A {Staphylococcus aureus} SCOP: c.34.1.0
Probab=31.49 E-value=39 Score=30.16 Aligned_cols=48 Identities=17% Similarity=0.243 Sum_probs=38.3
Q ss_pred ceEEEecccccchhhhHHHHHHHHHcC-CccEEEeCCCc--hhHHHHHhhc
Q psy4459 28 CTIFLGYTSNMVSSGVRETIKFLVQHK-LVDAIVTTAGG--VEEDLIKCLA 75 (400)
Q Consensus 28 ~~ifl~~tgnm~~aGlr~~i~~Li~~~-~Vd~iVtTgg~--lehDi~~~~~ 75 (400)
.+|.|++||+.-.--.-++++.|.++| -|++|+|.+|. +....++.+.
T Consensus 6 k~IllgvTGs~aa~k~~~ll~~L~~~g~~V~vv~T~~A~~fi~~~~l~~l~ 56 (175)
T 3qjg_A 6 ENVLICLCGSVNSINISHYIIELKSKFDEVNVIASTNGRKFINGEILKQFC 56 (175)
T ss_dssp CEEEEEECSSGGGGGHHHHHHHHTTTCSEEEEEECTGGGGGSCHHHHHHHC
T ss_pred CEEEEEEeCHHHHHHHHHHHHHHHHCCCEEEEEECcCHHHHhhHHHHHHhc
Confidence 589999999988877779999999988 58889998886 4455555553
No 22
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=30.90 E-value=36 Score=30.44 Aligned_cols=38 Identities=16% Similarity=0.167 Sum_probs=33.1
Q ss_pred ceEEEecccccchhhhHHHHHHHHHcC-CccEEEeCCCc
Q psy4459 28 CTIFLGYTSNMVSSGVRETIKFLVQHK-LVDAIVTTAGG 65 (400)
Q Consensus 28 ~~ifl~~tgnm~~aGlr~~i~~Li~~~-~Vd~iVtTgg~ 65 (400)
.+|.|++||+.-.--.-++++.|.++| -|++|+|-+|.
T Consensus 3 k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 41 (181)
T 1g63_A 3 GKLLICATASINVININHYIVELKQHFDEVNILFSPSSK 41 (181)
T ss_dssp CCEEEEECSCGGGGGHHHHHHHHTTTSSCEEEEECGGGG
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 369999999998888889999999987 58899988876
No 23
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=29.73 E-value=26 Score=31.73 Aligned_cols=39 Identities=10% Similarity=0.306 Sum_probs=33.3
Q ss_pred CceEEEecccccchhhhHHHHHHHHHcCC-ccEEEeCCCc
Q psy4459 27 NCTIFLGYTSNMVSSGVRETIKFLVQHKL-VDAIVTTAGG 65 (400)
Q Consensus 27 ~~~ifl~~tgnm~~aGlr~~i~~Li~~~~-Vd~iVtTgg~ 65 (400)
+.+|.|++||+.-.--.-++++.|.+.|. |++|+|-+|.
T Consensus 8 ~k~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 47 (194)
T 1p3y_1 8 DKKLLIGICGSISSVGISSYLLYFKSFFKEIRVVMTKTAE 47 (194)
T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTTTSSEEEEEECHHHH
T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEchhHH
Confidence 45899999999988888899999999884 8888887765
No 24
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=29.24 E-value=38 Score=30.92 Aligned_cols=41 Identities=12% Similarity=0.191 Sum_probs=33.1
Q ss_pred cCCceEEEecccccchhhhHHHHHHHHH-cC-CccEEEeCCCc
Q psy4459 25 KHNCTIFLGYTSNMVSSGVRETIKFLVQ-HK-LVDAIVTTAGG 65 (400)
Q Consensus 25 ~~~~~ifl~~tgnm~~aGlr~~i~~Li~-~~-~Vd~iVtTgg~ 65 (400)
..+.+|.|++||+.-.--.-++++.|.+ .| -|++|+|-+|.
T Consensus 17 l~~k~IllgvTGsiaa~k~~~lv~~L~~~~g~~V~vv~T~~A~ 59 (206)
T 1qzu_A 17 ERKFHVLVGVTGSVAALKLPLLVSKLLDIPGLEVAVVTTERAK 59 (206)
T ss_dssp CSSEEEEEEECSSGGGGTHHHHHHHHC---CEEEEEEECTGGG
T ss_pred cCCCEEEEEEeChHHHHHHHHHHHHHhcccCCEEEEEECHhHH
Confidence 3467899999999988888899999998 67 48888888775
No 25
>1g8l_A Molybdopterin biosynthesis MOEA protein; molybdenum cofactor biosynthesis, metal binding protein; 1.95A {Escherichia coli} SCOP: b.85.6.1 b.103.1.1 c.57.1.2 PDB: 1fc5_A 1g8r_A 2nqu_A 2nro_A 2nqq_A 2nqk_A 2nqr_A 2nqm_A 2nqs_A 2nrp_A 2nqv_A 2nrs_A 2nqn_A
Probab=28.67 E-value=51 Score=33.04 Aligned_cols=81 Identities=14% Similarity=0.243 Sum_probs=44.1
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc------hhHHHHHhhcC-cccccccCCchhHHhcCccccccCCCCCCCCCCcccc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG------VEEDLIKCLAP-SYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKV 113 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~------lehDi~~~~~~-~y~g~~~~dd~~L~~~ginRi~~~~~~~~~~~~~~~d 113 (400)
.-+++.|+.+++ -.|+||||||. +-.+.++.+|. .+.+-...+++-+ .+-+++ +.+ -
T Consensus 231 ~~i~~al~~a~~--~~DlvittGG~s~g~~D~t~~al~~~G~i~f~~va~~PG~p~---~~g~~~--------~~~---v 294 (411)
T 1g8l_A 231 HALRAAFIEADS--QADVVISSGGVSVGEADYTKTILEELGEIAFWKLAIKPGKPF---AFGKLS--------NSW---F 294 (411)
T ss_dssp HHHHHHHHHHHH--HCSEEEECSSSCSSSCSHHHHHHHHHSEEEEEEBSEESCCEE---EEEECS--------SSE---E
T ss_pred HHHHHHHHHHhh--cCCEEEECCCCCCCCcccHHHHHHhcCcEEEEEEEeeCCCcE---EEEEEC--------CEE---E
Confidence 456677777766 37999999985 44455555553 2222222222221 111111 011 1
Q ss_pred eeec---CccHHHHHHHHHHHHHHHHH
Q psy4459 114 HAVP---NDNYCAFENWLMPILDTMLR 137 (400)
Q Consensus 114 ~~ip---~e~~~~~E~~l~~il~~~~~ 137 (400)
+.+| ...+.-|+.++.|++.++..
T Consensus 295 ~~LPGnP~sa~~~~~~~v~P~L~~l~g 321 (411)
T 1g8l_A 295 CGLPGNPVSATLTFYQLVQPLLAKLSG 321 (411)
T ss_dssp EECCSSHHHHHHHHHHTHHHHHHHHHT
T ss_pred EEcCCChHHHHHHHHHHHHHHHHHHhC
Confidence 2334 34467789999999988753
No 26
>3rfq_A Pterin-4-alpha-carbinolamine dehydratase MOAB2; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: B3P; 2.25A {Mycobacterium marinum} PDB: 3tcr_A
Probab=26.35 E-value=38 Score=30.42 Aligned_cols=24 Identities=25% Similarity=0.356 Sum_probs=17.2
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.++. .-.|+||||||.
T Consensus 76 ~~I~~al~~a~~-~~~DlVIttGGt 99 (185)
T 3rfq_A 76 VDIRNALNTAVI-GGVDLVVSVGGT 99 (185)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEESCC
T ss_pred HHHHHHHHHHHh-CCCCEEEECCCC
Confidence 346666666653 348999999997
No 27
>3pzy_A MOG; ssgcid, seattle structural genomics center for infectious DI biosynthetic protein; 1.80A {Mycobacterium avium subsp} PDB: 3oi9_A 2g4r_A
Probab=25.06 E-value=43 Score=29.21 Aligned_cols=24 Identities=33% Similarity=0.455 Sum_probs=17.9
Q ss_pred hhhHHHHHHHHHcCCccEEEeCCCc
Q psy4459 41 SGVRETIKFLVQHKLVDAIVTTAGG 65 (400)
Q Consensus 41 aGlr~~i~~Li~~~~Vd~iVtTgg~ 65 (400)
.-+++.|+.+++ .-.|+||||||.
T Consensus 53 ~~i~~al~~a~~-~~~DlVittGG~ 76 (164)
T 3pzy_A 53 SPVGEALRKAID-DDVDVILTSGGT 76 (164)
T ss_dssp HHHHHHHHHHHH-TTCSEEEEESCC
T ss_pred HHHHHHHHHHHh-CCCCEEEECCCC
Confidence 346677777775 248999999987
No 28
>2ejb_A Probable aromatic acid decarboxylase; phenylacrylic acid decarboxylase, X-RAY diffraction, structural genomics, NPPSFA; 2.15A {Aquifex aeolicus}
Probab=23.61 E-value=44 Score=30.07 Aligned_cols=37 Identities=16% Similarity=0.062 Sum_probs=31.0
Q ss_pred eEEEecccccchhhhHHHHHHHHHcC-CccEEEeCCCc
Q psy4459 29 TIFLGYTSNMVSSGVRETIKFLVQHK-LVDAIVTTAGG 65 (400)
Q Consensus 29 ~ifl~~tgnm~~aGlr~~i~~Li~~~-~Vd~iVtTgg~ 65 (400)
+|.|++||+.-.--.-++++.|.++| -|++|+|-+|.
T Consensus 3 ~IllgvTGs~aa~k~~~l~~~L~~~g~~V~vv~T~~A~ 40 (189)
T 2ejb_A 3 KIALCITGASGVIYGIKLLQVLEELDFSVDLVISRNAK 40 (189)
T ss_dssp EEEEEECSSTTHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred EEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEEChhHH
Confidence 68999999977777778999999987 48888887764
No 29
>1sbz_A Probable aromatic acid decarboxylase; FMN binding, PAD1, UBIX, montreal-kingston bacterial structu genomics initiative, BSGI; HET: FMN; 2.00A {Escherichia coli} SCOP: c.34.1.1
Probab=22.92 E-value=42 Score=30.54 Aligned_cols=37 Identities=8% Similarity=0.047 Sum_probs=31.3
Q ss_pred eEEEecccccchhhhHHHHHHHHHc-C-CccEEEeCCCc
Q psy4459 29 TIFLGYTSNMVSSGVRETIKFLVQH-K-LVDAIVTTAGG 65 (400)
Q Consensus 29 ~ifl~~tgnm~~aGlr~~i~~Li~~-~-~Vd~iVtTgg~ 65 (400)
+|.|++||+.-.--.-++++.|.+. | -|++|+|-+|.
T Consensus 2 ~IllgvTGsiaa~k~~~ll~~L~~~~g~~V~vv~T~~A~ 40 (197)
T 1sbz_A 2 KLIVGMTGATGAPLGVALLQALREMPNVETHLVMSKWAK 40 (197)
T ss_dssp EEEEEECSSSCHHHHHHHHHHHHTCTTCEEEEEECHHHH
T ss_pred EEEEEEeChHHHHHHHHHHHHHHhccCCEEEEEECchHH
Confidence 6899999998777788999999988 6 58888887764
No 30
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=20.46 E-value=53 Score=30.14 Aligned_cols=38 Identities=21% Similarity=0.125 Sum_probs=32.8
Q ss_pred ceEEEecccccchhhhHHHHHHHHHcC-CccEEEeCCCc
Q psy4459 28 CTIFLGYTSNMVSSGVRETIKFLVQHK-LVDAIVTTAGG 65 (400)
Q Consensus 28 ~~ifl~~tgnm~~aGlr~~i~~Li~~~-~Vd~iVtTgg~ 65 (400)
.+|.|++||+.-.--.-++++.|.++| -|++|+|-+|.
T Consensus 5 k~IllgvTGaiaa~k~~~ll~~L~~~g~eV~vv~T~~A~ 43 (209)
T 3zqu_A 5 ERITLAMTGASGAQYGLRLLDCLVQEEREVHFLISKAAQ 43 (209)
T ss_dssp SEEEEEECSSSCHHHHHHHHHHHHHTTCEEEEEECHHHH
T ss_pred CEEEEEEECHHHHHHHHHHHHHHHHCCCEEEEEECccHH
Confidence 579999999988888889999999988 58888887774
Done!