RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy4459
         (400 letters)



>d1dhsa_ c.31.1.1 (A:) Deoxyhypusine synthase, DHS {Human (Homo
           sapiens) [TaxId: 9606]}
          Length = 361

 Score =  232 bits (594), Expect = 5e-74
 Identities = 132/228 (57%), Positives = 170/228 (74%), Gaps = 14/228 (6%)

Query: 1   LECRRLDLPEDKIDTYEEDLFIVRKHNCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIV 60
           +E +   L +D+    +         +CTIFLGYTSN++SSG+RETI++LVQH +VD +V
Sbjct: 62  IEKKLEPLSQDEDQHADLTQSRRPLTSCTIFLGYTSNLISSGIRETIRYLVQHNMVDVLV 121

Query: 61  TTAGGVEEDLIKCLAPSYVGDFQLDGKTLRDEGINRIDYGSEHGKKGSHVSKVHAVPNDN 120
           TTAGGVEEDLIKCLAP+Y+G+F L GK LR+ GINRI         G+ +     VPN+N
Sbjct: 122 TTAGGVEEDLIKCLAPTYLGEFSLRGKELRENGINRI---------GNLL-----VPNEN 167

Query: 121 YCAFENWLMPILDTMLREQKETGTVWTPSRIISRLGMEINHEDSICYWAAHNHIPIFSPA 180
           YC FE+WLMPILD M+ EQ   G  WTPS++I+RLG EIN+ +S+ YWA  NHIP+FSPA
Sbjct: 168 YCKFEDWLMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPA 227

Query: 181 LTDGSLGDMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGG 228
           LTDGSLGDM++FHS++NPGL+ DI++DLR +NT A+ A  TGMIILGG
Sbjct: 228 LTDGSLGDMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGG 275



 Score =  188 bits (478), Expect = 9e-57
 Identities = 101/156 (64%), Positives = 124/156 (79%)

Query: 200 LICDILQDLRRLNTMAVKAVNTGMIILGGAEINHEDSICYWAAHNHIPIFSPALTDGSLG 259
           L+  + Q +   NT  VK   + MI   G EIN+ +S+ YWA  NHIP+FSPALTDGSLG
Sbjct: 175 LMPILDQMVMEQNTEGVKWTPSKMIARLGKEINNPESVYYWAQKNHIPVFSPALTDGSLG 234

Query: 260 DMMYFHSFRNPGLICDILQDLRRLNTMAVKAVNTGMIILGGGVIKHHICNANLMRNGADY 319
           DM++FHS++NPGL+ DI++DLR +NT A+ A  TGMIILGGGV+KHHI NANLMRNGADY
Sbjct: 235 DMIFFHSYKNPGLVLDIVEDLRLINTQAIFAKCTGMIILGGGVVKHHIANANLMRNGADY 294

Query: 320 AVFINTGVEYDGSDSGARPDEAKSWGKIKREARPVK 355
           AV+INT  E+DGSDSGARPDEA SWGKI+ +A+PVK
Sbjct: 295 AVYINTAQEFDGSDSGARPDEAVSWGKIRVDAQPVK 330


>d1u2xa_ c.72.1.3 (A:) ADP-specific phosphofructokinase
          {Pyrococcus horikoshii [TaxId: 53953]}
          Length = 450

 Score = 26.0 bits (57), Expect = 9.3
 Identities = 11/55 (20%), Positives = 18/55 (32%), Gaps = 18/55 (32%)

Query: 27 NCTIFLGYTSNMVSSGVRETIKFLVQHKLVDAIVTTAGGVEEDLIKCLAPSYVGD 81
          + +I+  Y +N                  +DAIV       ++LI    P  V  
Sbjct: 5  HLSIYTAYNAN------------------IDAIVKLNQETIQNLINAFDPDEVKR 41


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.320    0.138    0.426 

Gapped
Lambda     K      H
   0.267   0.0620    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,597,031
Number of extensions: 76669
Number of successful extensions: 182
Number of sequences better than 10.0: 1
Number of HSP's gapped: 181
Number of HSP's successfully gapped: 9
Length of query: 400
Length of database: 2,407,596
Length adjustment: 87
Effective length of query: 313
Effective length of database: 1,213,086
Effective search space: 379695918
Effective search space used: 379695918
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 54 (24.8 bits)