BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy447
(417 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P14734|FKH_DROME Protein fork head OS=Drosophila melanogaster GN=fkh PE=1 SV=1
Length = 510
Score = 293 bits (749), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 201/408 (49%), Positives = 247/408 (60%), Gaps = 58/408 (14%)
Query: 49 SMGS--INGMNGPNCMSTGSMGYSS------NMNAACMG--------GINSYNTALTTGR 92
SMG+ +N M G NCM+ SM Y+S NM G++ A+ G
Sbjct: 122 SMGAAAMNSMGG-NCMTPSSMSYASMGSPLGNMGGCMAMSAASMSAAGLSGTYGAMPPGS 180
Query: 93 AELAENSPSPGALQRVARADK--TYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
E+ SP+ +L R +R DK TYRRSYTHAKPPYSYISLITMAIQN+PT+MLTLSEIY
Sbjct: 181 REMETGSPN--SLGR-SRVDKPTTYRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIY 237
Query: 151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENG 210
QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK+PRTPDKPGKGSFWTLH DSGNMFENG
Sbjct: 238 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENG 297
Query: 211 CYLRRQKRFKDDKKEVIRQTHHKSVSPTHH-----HPTHHHHHHSHHTHHNSHNTHSHQS 265
CYLRRQKRFKD+KKE IRQ H SP+H P H SHH HH+ H+ H
Sbjct: 298 CYLRRQKRFKDEKKEAIRQLHK---SPSHSSLEATSPGKKDHEDSHHMHHHHHSRLDHHQ 354
Query: 266 H--DAGGKKSPETKPHLSELAMLGLT-KEDAMSAGLLHSDFQQNSYHQSFH--------- 313
H +AGG ++ + +L +DA + +LH++ + Q H
Sbjct: 355 HHKEAGGAS-------IAGVNVLSAAHSKDAEALAMLHANAELCLSQQPQHVPTHHHHQH 407
Query: 314 --QQDSELAAMVASGRCHPHLIPPDHYNHH-LKQE-YGASAVNHPFPVSRLLPSASAMSA 369
Q EL+AM+A+ RCHP LI H + H LKQE G + +HPF ++RLLP+ S
Sbjct: 408 HQLQQEELSAMMAN-RCHPSLITDYHSSMHPLKQEPSGYTPSSHPFSINRLLPTESKADI 466
Query: 370 AMAMSADSAKSIDLCKMYEMTGGYSTGGNNDSYYQSSSLYHHSTTTSL 417
M D ++ + +T ++ G DSYYQS + + TTSL
Sbjct: 467 KM---YDMSQYAGYNALSPLTNSHAALG-QDSYYQSLGYHAPAGTTSL 510
>sp|Q17241|SGF1_BOMMO Silk gland factor 1 OS=Bombyx mori GN=SGF1 PE=2 SV=1
Length = 349
Score = 286 bits (731), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 186/398 (46%), Positives = 219/398 (55%), Gaps = 88/398 (22%)
Query: 13 SPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMGYSS- 71
SPG+ P Y +N + C P +S+NM + GS CM + S+GYS
Sbjct: 21 SPGLAPPY-VNGM--GCMPAQPYPNL----YSNNMVAGGS--------CMGSPSVGYSPP 65
Query: 72 NMNAACMGGINSYNTALTTGRAELAENSPSP-GALQRVARADKTYRRSYTHAKPPYSYIS 130
+ A+CMGG A+ G + + SP ALQR AR DKTYRRSYTHAKPPYSYIS
Sbjct: 66 STMASCMGGAG----AVPYGSLPREQEAASPTSALQR-ARNDKTYRRSYTHAKPPYSYIS 120
Query: 131 LITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDK 190
LITMAIQN+P++MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDK
Sbjct: 121 LITMAIQNNPSRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDK 180
Query: 191 PGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKSVSPTHHHPTHHHHHHS 250
PGKGSFWTLH DSGNMFENGC+LRRQKRFKD+KKE +RQ + TH H
Sbjct: 181 PGKGSFWTLHPDSGNMFENGCFLRRQKRFKDEKKETLRQA--QKAQQTHGH--------- 229
Query: 251 HHTHHNSHNTHSHQSHDAGGKKSPETKPHLSELAMLGLTKEDAMSAGLLHSDFQQNSYHQ 310
H SH+ HD P G KE
Sbjct: 230 ---HGGSHDKRGEHGHDKSAPPGP------------GEDKE------------------- 255
Query: 311 SFHQQDSELAAM-VASGRCHPHLIP--PDHYNHHLKQEYGASAVNHPFPVSRLLPSASAM 367
+D LA + A C P P +HY ++ G + HPF ++RLLP A
Sbjct: 256 ---MRDELLAQLHAAPELCLPEHTPLALEHYAQLKQEPSGYAPAQHPFSITRLLPGADTK 312
Query: 368 SAAMAMSADSAKSIDLCKMYEMTGGYSTGGNNDSYYQS 405
+ DL KMY++ GY D+YYQS
Sbjct: 313 A-------------DL-KMYDVNYGYGH-SPADNYYQS 335
>sp|P84961|FXA2B_XENLA Forkhead box protein A2-B OS=Xenopus laevis GN=foxa2-b PE=2 SV=1
Length = 433
Score = 245 bits (626), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 117/128 (91%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
+R KTYRRSYTHAKPPYSYISLITMAIQ SP+KMLTLSE+YQ+IMDLFPFYRQNQQRWQ
Sbjct: 133 SRDPKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEVYQWIMDLFPFYRQNQQRWQ 192
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK DKK +R
Sbjct: 193 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKKPSLR 252
Query: 229 QTHHKSVS 236
+ K +S
Sbjct: 253 EGGGKKLS 260
>sp|Q7T1R4|FOXA2_XENTR Forkhead box protein A2 OS=Xenopus tropicalis GN=foxa2 PE=2 SV=1
Length = 434
Score = 244 bits (623), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 116/128 (90%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
+R KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 135 SRDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 194
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +KK +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKPSLR 254
Query: 229 QTHHKSVS 236
+ K +S
Sbjct: 255 EGGGKKLS 262
>sp|Q91765|FXA2A_XENLA Forkhead box protein A2-A OS=Xenopus laevis GN=foxa2-a PE=1 SV=1
Length = 434
Score = 244 bits (622), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 108/128 (84%), Positives = 116/128 (90%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
+R KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 135 SRDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 194
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +KK +R
Sbjct: 195 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKPSLR 254
Query: 229 QTHHKSVS 236
+ K +S
Sbjct: 255 EGGGKKLS 262
>sp|P35583|FOXA2_MOUSE Hepatocyte nuclear factor 3-beta OS=Mus musculus GN=Foxa2 PE=1 SV=2
Length = 459
Score = 243 bits (621), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 105/122 (86%), Positives = 113/122 (92%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
AR KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 145 ARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 204
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+ ++
Sbjct: 205 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALK 264
Query: 229 QT 230
+
Sbjct: 265 EA 266
>sp|Q9Y261|FOXA2_HUMAN Hepatocyte nuclear factor 3-beta OS=Homo sapiens GN=FOXA2 PE=1 SV=1
Length = 457
Score = 241 bits (615), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 105/121 (86%), Positives = 113/121 (93%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
AR KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 145 ARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 204
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+ ++
Sbjct: 205 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALK 264
Query: 229 Q 229
+
Sbjct: 265 E 265
>sp|Q07342|FOXA2_DANRE Forkhead box protein A2 OS=Danio rerio GN=foxa2 PE=2 SV=1
Length = 409
Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 106/116 (91%), Positives = 111/116 (95%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
+R KTYRRSYTHAKPPYSYISLITMAIQ SP+KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 137 SRDPKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEIYQWIMDLFPFYRQNQQRWQ 196
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK DKK
Sbjct: 197 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKK 252
>sp|O42097|FOXA2_ORYLA Hepatocyte nuclear factor 3-beta OS=Oryzias latipes GN=foxa2 PE=2
SV=1
Length = 415
Score = 240 bits (612), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 105/125 (84%), Positives = 115/125 (92%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
+R KTYRRSYTHAKPPYSYISLITMAIQ SP+KMLTL+EIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 136 SRDPKTYRRSYTHAKPPYSYISLITMAIQQSPSKMLTLAEIYQWIMDLFPFYRQNQQRWQ 195
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +KK ++
Sbjct: 196 NSIRHSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKMSMK 255
Query: 229 QTHHK 233
+ K
Sbjct: 256 EPGRK 260
>sp|P55317|FOXA1_HUMAN Hepatocyte nuclear factor 3-alpha OS=Homo sapiens GN=FOXA1 PE=1
SV=2
Length = 472
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 146/220 (66%), Gaps = 12/220 (5%)
Query: 6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
S N S +PG+ S +V G P GG + M+SM + +S
Sbjct: 63 SFNMSYANPGLGAGLSPGAV----------AGMP-GGSAGAMNSMTAAGVTAMGTALSPS 111
Query: 66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTYRRSYTHAKP 124
MG AA M G+ Y A+ + +A + G + D KT++RSY HAKP
Sbjct: 112 GMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKP 171
Query: 125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
PYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSLSFNDCFVKV
Sbjct: 172 PYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKV 231
Query: 185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct: 232 ARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271
>sp|Q6LD29|FXA1A_XENLA Forkhead box protein A1-A OS=Xenopus laevis GN=foxa1-a PE=2 SV=2
Length = 429
Score = 235 bits (599), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 125/200 (62%), Positives = 148/200 (74%), Gaps = 13/200 (6%)
Query: 34 GSTGTPLGGFSSNMHSMGS-----INGMNGPNCMSTGSMGYSSNMNA--ACMGGINSYN- 85
G++G G S M MG+ +NGM G S G+ SNMNA A +NS +
Sbjct: 67 GNSGLGAGLSPSGMSGMGAGAASAMNGM-GSGVPSMGTALSPSNMNAMSAQQASMNSLSY 125
Query: 86 TALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLT 145
+++ G + +A S + + R AR KT+RRSY HAKPPYSYISLITMAIQ +P+KMLT
Sbjct: 126 SSMNPGMSPMAYGSSN---MNR-ARDTKTFRRSYPHAKPPYSYISLITMAIQQAPSKMLT 181
Query: 146 LSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGN 205
LSEIYQ+IMDLFP+YRQNQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+WTLH DSGN
Sbjct: 182 LSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGN 241
Query: 206 MFENGCYLRRQKRFKDDKKE 225
MFENGCYLRRQKRFK +K +
Sbjct: 242 MFENGCYLRRQKRFKCEKTQ 261
>sp|P32315|FXA1B_XENLA Forkhead box protein A1-B OS=Xenopus laevis GN=foxa1-b PE=2 SV=1
Length = 427
Score = 234 bits (598), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 133/239 (55%), Positives = 161/239 (67%), Gaps = 25/239 (10%)
Query: 21 SMNSVINSCSPQSGSTGTPLG------GFS----SNMHSMGSINGMNGPNCMSTGSMGYS 70
+MN + + + SGS P G G S S M S G++NGM G S GS
Sbjct: 46 TMNPMSSGSNITSGSFNMPYGNSGLGAGLSPSGMSGMGSAGAMNGM-GSGVPSMGSALSP 104
Query: 71 SNMNA---ACMGGINSYN-TALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPY 126
SNMNA A +NS + +++ +G + + + + + R R KT+RRSY HAKPPY
Sbjct: 105 SNMNAIQSAQQASMNSLSYSSMNSGMSPMGYGATN---INRT-RDSKTFRRSYPHAKPPY 160
Query: 127 SYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPR 186
SYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSLSFNDCF+KV R
Sbjct: 161 SYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVSR 220
Query: 187 TPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDK------KEVIRQTHHKSVSPTH 239
+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K + R+ H SP H
Sbjct: 221 SPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKTQGGKGNQDGRKDHSGPSSPLH 279
>sp|P23512|FOXA1_RAT Hepatocyte nuclear factor 3-alpha OS=Rattus norvegicus GN=Foxa1
PE=1 SV=1
Length = 466
Score = 233 bits (595), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 123/220 (55%), Positives = 146/220 (66%), Gaps = 12/220 (5%)
Query: 6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
S N S +PG+ S +V G P GG + M+SM + +S G
Sbjct: 63 SFNMSYANPGLGAGLSPGAV----------AGMP-GGSAGAMNSMTAAGVTAMGAALSPG 111
Query: 66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTYRRSYTHAKP 124
MG AA M G+ Y A+ + +A + G + D KT++RSY HAKP
Sbjct: 112 GMGSMGAQPAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPHAKP 171
Query: 125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
PYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSLSFN CFVKV
Sbjct: 172 PYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNACFVKV 231
Query: 185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct: 232 ARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271
>sp|P35582|FOXA1_MOUSE Hepatocyte nuclear factor 3-alpha OS=Mus musculus GN=Foxa1 PE=1
SV=2
Length = 468
Score = 233 bits (594), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 122/223 (54%), Positives = 146/223 (65%), Gaps = 17/223 (7%)
Query: 3 NMLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCM 62
NM NT LG+ G++P G+ G + M+SM + +
Sbjct: 65 NMSYANTGLGA-GLSP---------------GAVAGMPGASAGAMNSMTAAGVTAMGTAL 108
Query: 63 STGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTYRRSYTH 121
S G MG A M G+ Y A+ + +A + G + D KT++RSY H
Sbjct: 109 SPGGMGSMGAQPATSMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTFKRSYPH 168
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
AKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSLSFNDCF
Sbjct: 169 AKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSLSFNDCF 228
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
VKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct: 229 VKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271
>sp|P32182|FOXA2_RAT Hepatocyte nuclear factor 3-beta OS=Rattus norvegicus GN=Foxa2 PE=1
SV=1
Length = 458
Score = 231 bits (589), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 103/121 (85%), Positives = 110/121 (90%), Gaps = 1/121 (0%)
Query: 109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
AR KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQ
Sbjct: 145 ARDPKTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQ 204
Query: 169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
NSIRHSLSFND F+KVPR PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK + + ++
Sbjct: 205 NSIRHSLSFND-FLKVPRAPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCENELALK 263
Query: 229 Q 229
+
Sbjct: 264 E 264
>sp|Q8AWH1|FOXA1_XENTR Forkhead box protein A1 OS=Xenopus tropicalis GN=foxa1 PE=2 SV=1
Length = 428
Score = 229 bits (584), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/189 (63%), Positives = 140/189 (74%), Gaps = 13/189 (6%)
Query: 45 SNMHSMGS-----INGMNGPNCMSTGSMGYSSNMNA--ACMGGINSYN-TALTTGRAELA 96
S M MG+ +NGM G S G+ S+MNA A INS + + + G + +A
Sbjct: 77 SGMSGMGAGSASAMNGM-GSGVSSMGTALSPSSMNAMSAQQASINSLSYSGMNPGMSPMA 135
Query: 97 ENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDL 156
P + R R KT+RRSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDL
Sbjct: 136 YG---PSNMNRT-RDTKTFRRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDL 191
Query: 157 FPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQ 216
F +YRQNQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQ
Sbjct: 192 FLYYRQNQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQ 251
Query: 217 KRFKDDKKE 225
KRFK +K++
Sbjct: 252 KRFKCEKQQ 260
>sp|Q6P839|FOXA4_XENTR Forkhead box protein A4 OS=Xenopus tropicalis GN=foxa4 PE=2 SV=1
Length = 399
Score = 223 bits (567), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 129/178 (72%), Gaps = 19/178 (10%)
Query: 54 NGMNGPNCMSTGSMGYSSNMNAACMGGIN------SYNTALTTGRAELAENSPSPGALQR 107
NG++GP G++G +M +G + +Y G +E
Sbjct: 57 NGLSGPVTSIQGNLGSLGSMTQGMVGSLAPPASTPAYPMGYCQGESEFQ----------- 105
Query: 108 VARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRW 167
R +TYRR+Y+HAKPPYSYISLITMAIQ +P KM+TL+EIYQ+I+DLFP+YRQNQQRW
Sbjct: 106 --RDPRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRW 163
Query: 168 QNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
QNSIRHSLSFNDCFVKVPR+P+KPGKGS+WTLH +SGNMFENGCYLRRQKRFK ++ +
Sbjct: 164 QNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCERSK 221
>sp|P33206|FXA4B_XENLA Forkhead box protein A4-B OS=Xenopus laevis GN=foxa4-b PE=2 SV=1
Length = 400
Score = 222 bits (565), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 103/178 (57%), Positives = 129/178 (72%), Gaps = 19/178 (10%)
Query: 54 NGMNGPNCMSTGSMGYSSNMNAACMGGI------NSYNTALTTGRAELAENSPSPGALQR 107
NG+ GP G++G +M +G + ++Y G +E
Sbjct: 57 NGLPGPVASIQGNLGSLGSMTQGMVGSLAPPPSTSAYPLGYCQGESEFQ----------- 105
Query: 108 VARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRW 167
R +TYRR+Y+HAKPPYSYISLITMAIQ +P KM+TL+EIYQ+I+DLFP+YRQNQQRW
Sbjct: 106 --RDPRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIVDLFPYYRQNQQRW 163
Query: 168 QNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
QNSIRHSLSFNDCF+KVPR+P+KPGKGS+WTLH +SGNMFENGCYLRRQKRFK ++ +
Sbjct: 164 QNSIRHSLSFNDCFIKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCERSK 221
>sp|P33205|FXA4A_XENLA Forkhead box protein A4-A OS=Xenopus laevis GN=foxa4-a PE=1 SV=3
Length = 399
Score = 221 bits (562), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 128/178 (71%), Gaps = 19/178 (10%)
Query: 54 NGMNGPNCMSTGSMGYSSNMNAACMGGIN------SYNTALTTGRAELAENSPSPGALQR 107
NG+ GP G++G +M +G + +Y G +E
Sbjct: 57 NGLPGPVTSIQGNIGSLGSMPQGMVGSLAPPPSTAAYPLGYCQGESEFQ----------- 105
Query: 108 VARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRW 167
R +TYRR+Y+HAKPPYSYISLITMAIQ +P KM+TL+EIYQ+I+DLFP+YRQNQQRW
Sbjct: 106 --RDPRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNEIYQWIIDLFPYYRQNQQRW 163
Query: 168 QNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
QNSIRHSLSFNDCFVKVPR+P+KPGKGS+WTLH +SGNMFENGCYLRRQKRFK ++ +
Sbjct: 164 QNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGNMFENGCYLRRQKRFKCERSK 221
>sp|P32183|FOXA3_RAT Hepatocyte nuclear factor 3-gamma OS=Rattus norvegicus GN=Foxa3
PE=1 SV=1
Length = 354
Score = 216 bits (551), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 98/126 (77%), Positives = 108/126 (85%), Gaps = 1/126 (0%)
Query: 99 SPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFP 158
+P PG + A K YRR THAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP
Sbjct: 96 APGPGLVHGKEMA-KGYRRPLTHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFP 154
Query: 159 FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH SGNMFENGCYLRRQKR
Sbjct: 155 YYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKR 214
Query: 219 FKDDKK 224
FK ++K
Sbjct: 215 FKLEEK 220
>sp|P35584|FOXA3_MOUSE Hepatocyte nuclear factor 3-gamma OS=Mus musculus GN=Foxa3 PE=1
SV=1
Length = 353
Score = 214 bits (545), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 97/126 (76%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 99 SPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFP 158
+P PG + A K YRR HAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP
Sbjct: 96 APGPGLVHGKEMA-KGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFP 154
Query: 159 FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH SGNMFENGCYLRRQKR
Sbjct: 155 YYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKR 214
Query: 219 FKDDKK 224
FK ++K
Sbjct: 215 FKLEEK 220
>sp|Q3Y598|FOXA3_BOVIN Hepatocyte nuclear factor 3-gamma OS=Bos taurus GN=FOXA3 PE=2 SV=1
Length = 351
Score = 213 bits (541), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
K YRR HAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP+YR+NQQRWQNSIR
Sbjct: 108 KGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIR 167
Query: 173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
HSLSFNDCFVKV R+PDKPGKGS+W LH SGNMFENGCYLRRQKRFK ++K
Sbjct: 168 HSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEK 219
>sp|P55318|FOXA3_HUMAN Hepatocyte nuclear factor 3-gamma OS=Homo sapiens GN=FOXA3 PE=1
SV=2
Length = 350
Score = 212 bits (540), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 93/112 (83%), Positives = 101/112 (90%)
Query: 113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
K YRR HAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP+YR+NQQRWQNSIR
Sbjct: 107 KGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYYRENQQRWQNSIR 166
Query: 173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
HSLSFNDCFVKV R+PDKPGKGS+W LH SGNMFENGCYLRRQKRFK ++K
Sbjct: 167 HSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFKLEEK 218
>sp|Q17381|PHA4_CAEEL Defective pharyngeal development protein 4 OS=Caenorhabditis
elegans GN=pha-4 PE=1 SV=1
Length = 506
Score = 201 bits (510), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 90/139 (64%), Positives = 106/139 (76%), Gaps = 2/139 (1%)
Query: 105 LQRVARADKTYRR--SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQ 162
+Q + RR +Y +KPPYSYISLITMAIQ S ++ LTLSEIY +IMDLFP+Y+
Sbjct: 216 IQEFETVTEKIRRHGTYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQN 275
Query: 163 NQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDD 222
NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGSFWTLH+ GNMFENGCYLRRQKRFK
Sbjct: 276 NQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVK 335
Query: 223 KKEVIRQTHHKSVSPTHHH 241
++E R+ + + H
Sbjct: 336 EREPSRKKRNANSQQLHQQ 354
>sp|Q99853|FOXB1_HUMAN Forkhead box protein B1 OS=Homo sapiens GN=FOXB1 PE=2 SV=3
Length = 325
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 125/218 (57%), Gaps = 10/218 (4%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
R +Y+ KPPYSYISL MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct: 6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKSV 235
SFNDCF+K+PR PD+PGKGSFW LH G+MFENG +LRR+KRFK V++ H
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK-----VLKSDHLAPS 120
Query: 236 SPTHHHPTHHHHHHSHHTHHNSHNTHSHQ----SHDAGGKKSPETKPHLSELAMLGLTKE 291
P + + TH Q +++ GG P H + + + +E
Sbjct: 121 KPADAAQYLQQQAKLRLSALAASGTHLPQMPAAAYNLGGVAQPSGFKHPFAIENI-IARE 179
Query: 292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCH 329
M GL S Q Q + + + + +G H
Sbjct: 180 YKMPGGLAFSAMQPVPAAYPLPNQLTTMGSSLGTGWPH 217
>sp|Q64732|FOXB1_MOUSE Forkhead box protein B1 OS=Mus musculus GN=Foxb1 PE=2 SV=2
Length = 325
Score = 186 bits (471), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 95/218 (43%), Positives = 125/218 (57%), Gaps = 10/218 (4%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
R +Y+ KPPYSYISL MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct: 6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKSV 235
SFNDCF+K+PR PD+PGKGSFW LH G+MFENG +LRR+KRFK V++ H
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK-----VLKSDHLAPS 120
Query: 236 SPTHHHPTHHHHHHSHHTHHNSHNTHSHQ----SHDAGGKKSPETKPHLSELAMLGLTKE 291
P + + TH Q +++ GG P H + + + +E
Sbjct: 121 KPADAAQYLQQQAKLRLSALAASGTHLPQMPAAAYNLGGVAQPSGFKHPFAIENI-IARE 179
Query: 292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCH 329
M GL S Q Q + + + + +G H
Sbjct: 180 YKMPGGLAFSAMQPVPAAYPLPNQLTTMGSSLGTGWPH 217
>sp|O93529|FOXB1_XENLA Forkhead box protein B1 OS=Xenopus laevis GN=foxb1 PE=2 SV=1
Length = 319
Score = 178 bits (452), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 76/110 (69%), Positives = 90/110 (81%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
R +Y+ KPPYSYISL MAIQ S KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct: 6 RNTYSDQKPPYSYISLTAMAIQGSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
SFNDCF+K+PR PD+PGKGSFW LH G+MFENG +LRR+KRFK K +
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPRCGDMFENGSFLRRRKRFKVMKSD 115
>sp|Q64733|FOXB2_MOUSE Forkhead box protein B2 OS=Mus musculus GN=Foxb2 PE=2 SV=1
Length = 428
Score = 175 bits (444), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 94/116 (81%), Gaps = 5/116 (4%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
+ SY+ KPPYSYISL MAIQ+S KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct: 6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTH 231
SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK V+R H
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK-----VLRADH 116
>sp|Q5VYV0|FOXB2_HUMAN Forkhead box protein B2 OS=Homo sapiens GN=FOXB2 PE=2 SV=1
Length = 432
Score = 175 bits (443), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 76/116 (65%), Positives = 94/116 (81%), Gaps = 5/116 (4%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
+ SY+ KPPYSYISL MAIQ+S KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct: 6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTH 231
SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK V+R H
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK-----VLRADH 116
>sp|P32028|FD4_DROME Fork head domain-containing protein FD4 OS=Drosophila melanogaster
GN=fd96Ca PE=2 SV=2
Length = 372
Score = 171 bits (432), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 88/110 (80%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
R SY KPPYSYISL MAI +SP KML LS+IY+FI D FP+YR+N QRWQNS+RH+L
Sbjct: 6 RESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
SFNDCF+KVPR PD+PGKG++W LH + +MFENG LRR+KRFK K +
Sbjct: 66 SFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKND 115
>sp|Q99958|FOXC2_HUMAN Forkhead box protein C2 OS=Homo sapiens GN=FOXC2 PE=1 SV=1
Length = 501
Score = 165 bits (418), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 79/119 (66%), Positives = 92/119 (77%), Gaps = 2/119 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CF
Sbjct: 71 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF--KDDKKEVIRQTHHKSVSPT 238
VKVPR KPGKGS+WTL DS NMFENG +LRR++RF KD KE + H K P
Sbjct: 131 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKEKEERAHLKEPPPA 189
>sp|Q61850|FOXC2_MOUSE Forkhead box protein C2 OS=Mus musculus GN=Foxc2 PE=2 SV=2
Length = 494
Score = 165 bits (417), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 76/113 (67%), Positives = 92/113 (81%), Gaps = 2/113 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CF
Sbjct: 70 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 129
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKS 234
VKVPR KPGKGS+WTL DS NMFENG +LRR++RFK KK+V + ++
Sbjct: 130 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVPKDKEERA 180
>sp|Q6NVT7|FOXC2_XENTR Forkhead box protein C2 OS=Xenopus tropicalis GN=foxc2 PE=2 SV=2
Length = 464
Score = 164 bits (416), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 77/112 (68%), Positives = 92/112 (82%), Gaps = 2/112 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CF
Sbjct: 71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHK 233
VKVPR KPGKGS+WTL DS NMFENG +LRR++RFK KK+V R+ +
Sbjct: 131 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVSREKEDR 180
>sp|Q8JIT6|FOXB2_XENLA Forkhead box protein B2 OS=Xenopus laevis GN=foxb2 PE=2 SV=1
Length = 317
Score = 163 bits (413), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/136 (58%), Positives = 100/136 (73%), Gaps = 9/136 (6%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
+ SY+ KPPYSYISL MAIQ S KML LS+IY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct: 6 KSSYSEQKPPYSYISLTAMAIQGSQEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKSV 235
SFNDCF+K+PR PD+PGKGSFW LH + G+MFENG +LRR+KRFK + E + H+ +
Sbjct: 66 SFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKRFKVVRAEHLASKSHQMI 125
Query: 236 SPTHHHPTHHHHHHSH 251
H+ HH H
Sbjct: 126 ---------HYFHHPH 132
>sp|Q61572|FOXC1_MOUSE Forkhead box protein C1 OS=Mus musculus GN=Foxc1 PE=2 SV=3
Length = 553
Score = 162 bits (411), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 96/132 (72%), Gaps = 2/132 (1%)
Query: 102 PGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYR 161
PG++ R + KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR
Sbjct: 57 PGSMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYR 116
Query: 162 QNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
N+Q WQNSIRH+LS N+CFVKVPR KPGKGS+WTL DS NMFENG +LRR++RFK
Sbjct: 117 DNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK- 175
Query: 222 DKKEVIRQTHHK 233
KK+ ++ K
Sbjct: 176 -KKDAVKDKEEK 186
>sp|Q12948|FOXC1_HUMAN Forkhead box protein C1 OS=Homo sapiens GN=FOXC1 PE=1 SV=3
Length = 553
Score = 162 bits (411), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 95/132 (71%), Gaps = 2/132 (1%)
Query: 102 PGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYR 161
PG + R + KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR
Sbjct: 57 PGGMARAYGPYTPQPQPKDMVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYR 116
Query: 162 QNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
N+Q WQNSIRH+LS N+CFVKVPR KPGKGS+WTL DS NMFENG +LRR++RFK
Sbjct: 117 DNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK- 175
Query: 222 DKKEVIRQTHHK 233
KK+ ++ K
Sbjct: 176 -KKDAVKDKEEK 186
>sp|Q9DE25|FXC1A_DANRE Forkhead box C1-A OS=Danio rerio GN=foxc1a PE=2 SV=1
Length = 476
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/114 (66%), Positives = 91/114 (79%), Gaps = 2/114 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQNSP K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CF
Sbjct: 73 VKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 132
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHKSV 235
VKVPR KPGKGS+WTL DS NMFENG +LRR++RFK KK+ ++ + V
Sbjct: 133 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDAMKDKEDRGV 184
>sp|Q9DE24|FXC1B_DANRE Forkhead box C1-B OS=Danio rerio GN=foxc1b PE=2 SV=1
Length = 433
Score = 162 bits (409), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 79/132 (59%), Positives = 97/132 (73%), Gaps = 2/132 (1%)
Query: 102 PGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYR 161
PG + R ++ KPPYSYI+LITMAIQNS K +TL+ IYQFIM+ FPFYR
Sbjct: 53 PGGMARAYGPYAPAQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIMERFPFYR 112
Query: 162 QNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
N+Q WQNSIRH+LS N+CFVKVPR KPGKGS+WTL DS NMFENG +LRR++RFK
Sbjct: 113 DNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK- 171
Query: 222 DKKEVIRQTHHK 233
KK+V+R+ +
Sbjct: 172 -KKDVLREKEDR 182
>sp|Q68F77|FOXC1_XENTR Forkhead box protein C1 OS=Xenopus tropicalis GN=foxc1 PE=2 SV=1
Length = 495
Score = 161 bits (408), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/107 (70%), Positives = 90/107 (84%), Gaps = 2/107 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CF
Sbjct: 78 VKPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
VKVPR KPGKGS+WTL DS NMFENG +LRR++RFK KK+V++
Sbjct: 138 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVVK 182
>sp|Q9PVY8|FXC2B_XENLA Forkhead box protein C2-B OS=Xenopus laevis GN=foxc2-b PE=2 SV=2
Length = 461
Score = 161 bits (407), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 75/112 (66%), Positives = 91/112 (81%), Gaps = 2/112 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CF
Sbjct: 71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQTHHK 233
VKVPR KPGKGS+W+L DS NMFENG +LRR++RFK KK+ R+ +
Sbjct: 131 VKVPRDDKKPGKGSYWSLDPDSYNMFENGSFLRRRRRFK--KKDASREKEDR 180
>sp|Q9PVZ3|FXC1A_XENLA Forkhead box protein C1-A OS=Xenopus laevis GN=foxc1-a PE=2 SV=1
Length = 492
Score = 159 bits (403), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 93/120 (77%), Gaps = 10/120 (8%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CF
Sbjct: 78 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF----------KDDKKEVIRQTH 231
VKVPR KPGKGS+WTL DS NMFENG +LRR++RF K+DK+ ++++ H
Sbjct: 138 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFKKKDVSKDATKEDKERLLKEHH 197
>sp|P32029|FD5_DROME Fork head domain-containing protein FD5 OS=Drosophila melanogaster
GN=fd96Cb PE=2 SV=2
Length = 271
Score = 159 bits (402), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 71/113 (62%), Positives = 88/113 (77%)
Query: 113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
+ + SY KPPYSYISL MAI +SP ++L LSEIY+FIMD FPFYR+N Q+WQNS+R
Sbjct: 3 RPLKMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLR 62
Query: 173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
H+LSFNDCF+KVPR K GKGS+WTLH + +MFENG LRR+KRF+ + E
Sbjct: 63 HNLSFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFRVKQLE 115
>sp|Q32NP8|FXC1B_XENLA Forkhead box protein C1-B OS=Xenopus laevis GN=foxc1-b PE=2 SV=1
Length = 495
Score = 159 bits (401), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/105 (71%), Positives = 88/105 (83%), Gaps = 2/105 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CF
Sbjct: 78 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECF 137
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
VKVPR KPGKGS+WTL DS NMFENG +LRR++RFK KK+V
Sbjct: 138 VKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV 180
>sp|Q9PVY9|FXC2A_XENLA Forkhead box protein C2-A OS=Xenopus laevis GN=foxc2-a PE=2 SV=1
Length = 465
Score = 155 bits (393), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 67/92 (72%), Positives = 78/92 (84%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CF
Sbjct: 71 VKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECF 130
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYL 213
VKVPR KPGKGS+W+L DS NMFENG +L
Sbjct: 131 VKVPRDDKKPGKGSYWSLDPDSYNMFENGSFL 162
>sp|Q63246|FOXC2_RAT Forkhead box protein C2 (Fragment) OS=Rattus norvegicus GN=Foxc2
PE=3 SV=1
Length = 101
Score = 152 bits (383), Expect = 6e-36, Method: Composition-based stats.
Identities = 72/98 (73%), Positives = 84/98 (85%)
Query: 123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
KPPYSYI+L TMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct: 3 KPPYSYIALSTMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 62
Query: 183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
KVPR KPGKGS+WTL DS NMFENG +LRR++RFK
Sbjct: 63 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK 100
>sp|Q12952|FOXL1_HUMAN Forkhead box protein L1 OS=Homo sapiens GN=FOXL1 PE=2 SV=2
Length = 345
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 117 RSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLS 176
R+ T KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY N+Q WQNSIRH+LS
Sbjct: 43 RAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLS 102
Query: 177 FNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK-----DDKKEVIRQTH 231
NDCFVKVPR +PGKGS+WTL +MFENG Y RR+++ K + K +TH
Sbjct: 103 LNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPKPGPGAPEAKRPRAETH 162
Query: 232 HKSVS 236
+S
Sbjct: 163 QRSAE 167
>sp|P32027|CROC_DROME Fork head domain-containing protein crocodile OS=Drosophila
melanogaster GN=croc PE=2 SV=2
Length = 508
Score = 149 bits (376), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 88/108 (81%), Gaps = 2/108 (1%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
KPPYSYI+LI MAIQN+ K +TL+ IYQ+IM+ FP+YR N+Q WQNSIRH+LS N+CF
Sbjct: 69 VKPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECF 128
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
VKV R KPGKGS+WTL DS NMF+NG +LRR++RFK KK+V+R+
Sbjct: 129 VKVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFK--KKDVMRE 174
>sp|P34683|LIN31_CAEEL Protein lin-31 OS=Caenorhabditis elegans GN=lin-31 PE=4 SV=1
Length = 237
Score = 147 bits (370), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 78/98 (79%)
Query: 116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
+ SY KPPYSYI L MAIQ+S KML L+EIY++IMD FPFYR+N QRWQNS+RH+L
Sbjct: 6 KDSYDEQKPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNL 65
Query: 176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYL 213
SFNDCF+K+PR D+PGKGS+W +H ++ MFENG L
Sbjct: 66 SFNDCFIKIPRRADRPGKGSYWAVHPNASGMFENGSCL 103
>sp|Q64731|FOXL1_MOUSE Forkhead box protein L1 OS=Mus musculus GN=Foxl1 PE=2 SV=2
Length = 336
Score = 145 bits (366), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 63/98 (64%), Positives = 78/98 (79%)
Query: 123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY N+Q WQNSIRH+LS N+CFV
Sbjct: 49 KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECFV 108
Query: 183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
KVPR +PGKGS+WTL +MFENG Y RR+++ K
Sbjct: 109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146
>sp|Q12950|FOXD4_HUMAN Forkhead box protein D4 OS=Homo sapiens GN=FOXD4 PE=2 SV=4
Length = 439
Score = 144 bits (362), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 63/99 (63%), Positives = 77/99 (77%)
Query: 122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
AKPP SYI+LITMAI SP K LTLS I FI D FP+YR+ WQNSIRH+LS NDCF
Sbjct: 103 AKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCF 162
Query: 182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
VK+PR P +PGKG++W+L S +MF+NG +LRR+KRF+
Sbjct: 163 VKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQ 201
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.126 0.383
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 163,737,840
Number of Sequences: 539616
Number of extensions: 6810119
Number of successful extensions: 44619
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 233
Number of HSP's that attempted gapping in prelim test: 28208
Number of HSP's gapped (non-prelim): 6936
length of query: 417
length of database: 191,569,459
effective HSP length: 120
effective length of query: 297
effective length of database: 126,815,539
effective search space: 37664215083
effective search space used: 37664215083
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)