AmiGO: BLAST Results


BLAST match view associations BLAST with fkh fkh fkh fork head	protein from Drosophila melanogaster	5.2e-77
BLAST match view associations BLAST with FoxA FoxA FoxA Uncharacterized protein	protein from Strongylocentrotus purpuratus	2.0e-65
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Bos taurus	3.3e-65
BLAST match view associations BLAST with PANDA_013447 PANDA_013447 PANDA_013447 Putative uncharacterized protein	protein from Ailuropoda melanoleuca	6.8e-65
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Hepatocyte nuclear factor 3-beta	protein from Homo sapiens	4.8e-64
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Sus scrofa	4.8e-64
BLAST match view associations BLAST with foxa2 foxa2 foxa2 Forkhead box protein A2	protein from Xenopus (Silurana) tropicalis	1.3e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Sus scrofa	3.3e-63
BLAST match view associations BLAST with foxa2-a foxa2-a foxa2-a Forkhead box protein A2-A	protein from Xenopus laevis	3.3e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Bos taurus	4.2e-63
BLAST match view associations BLAST with foxa1 foxa1 foxa1 forkhead box A1	gene_product from Danio rerio	6.9e-63
BLAST match view associations BLAST with foxa2-b foxa2-b foxa2-b Forkhead box protein A2-B	protein from Xenopus laevis	1.1e-62
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Hepatocyte nuclear factor 3-alpha	protein from Homo sapiens	1.1e-62
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Hepatocyte nuclear factor 3-alpha	protein from Homo sapiens	1.1e-62
BLAST match view associations BLAST with foxa2 foxa2 foxa2 forkhead box A2	gene_product from Danio rerio	1.4e-62
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Canis lupus familiaris	2.3e-62
BLAST match view associations BLAST with foxa1-a foxa1-a foxa1-a Forkhead box protein A1-A	protein from Xenopus laevis	3.7e-62
BLAST match view associations BLAST with Foxa1 Foxa1 Foxa1 forkhead box A1	protein from Mus musculus	6.1e-62
BLAST match view associations BLAST with Foxa2 Foxa2 Foxa2 forkhead box A2	gene from Rattus norvegicus	6.1e-62
BLAST match view associations BLAST with foxa1-b foxa1-b foxa1-b Forkhead box protein A1-B	protein from Xenopus laevis	1.3e-61
BLAST match view associations BLAST with foxa3 foxa3 foxa3 forkhead box A3	gene_product from Danio rerio	2.6e-61
BLAST match view associations BLAST with Foxa2 Foxa2 Foxa2 forkhead box A2	protein from Mus musculus	5.5e-61
BLAST match view associations BLAST with Foxa1 Foxa1 Foxa1 forkhead box A1	gene from Rattus norvegicus	6.9e-61
BLAST match view associations BLAST with foxa1 foxa1 foxa1 Forkhead box protein A1	protein from Xenopus (Silurana) tropicalis	1.8e-60
BLAST match view associations BLAST with foxa4 foxa4 foxa4 Forkhead box protein A4	protein from Xenopus (Silurana) tropicalis	4.9e-53
BLAST match view associations BLAST with foxa4-b foxa4-b foxa4-b Forkhead box protein A4-B	protein from Xenopus laevis	8.0e-53
BLAST match view associations BLAST with foxa4-a foxa4-a foxa4-a Forkhead box protein A4-A	protein from Xenopus laevis	2.1e-52
BLAST match view associations BLAST with Foxa3 Foxa3 Foxa3 forkhead box A3	gene from Rattus norvegicus	3.1e-51
BLAST match view associations BLAST with Foxa3 Foxa3 Foxa3 forkhead box A3	protein from Mus musculus	6.5e-51
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Hepatocyte nuclear factor 3-gamma	protein from Bos taurus	1.7e-50
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Hepatocyte nuclear factor 3-gamma	protein from Homo sapiens	3.6e-50
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-49
BLAST match view associations BLAST with LOC100512416 LOC100512416 LOC100512416 Uncharacterized protein	protein from Sus scrofa	3.2e-49
BLAST match view associations BLAST with foxa foxa foxa forkhead box A sequence	gene_product from Danio rerio	8.8e-47
BLAST match view associations BLAST with pha-4 pha-4 pha-4	gene from Caenorhabditis elegans	3.0e-46
BLAST match view associations BLAST with pha-4 pha-4 pha-4 Defective pharyngeal development protein 4	protein from Caenorhabditis elegans	3.0e-46
BLAST match view associations BLAST with Foxb2 Foxb2 Foxb2 forkhead box B2	protein from Mus musculus	1.6e-43
BLAST match view associations BLAST with foxb2 foxb2 foxb2 forkhead box B2	gene_product from Danio rerio	2.5e-43
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Uncharacterized protein	protein from Canis lupus familiaris	3.2e-43
BLAST match view associations BLAST with LOC100156565 LOC100156565 LOC100156565 Uncharacterized protein	protein from Sus scrofa	5.2e-43
BLAST match view associations BLAST with foxb1 foxb1 foxb1 Foxb1 protein	protein from Xenopus (Silurana) tropicalis	6.7e-43
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Forkhead box protein B2	protein from Homo sapiens	8.5e-43
BLAST match view associations BLAST with foxb1 foxb1 foxb1 Forkhead box protein B1	protein from Xenopus laevis	1.8e-42
BLAST match view associations BLAST with fkh1 fkh1 fkh1 Winged helix transcription factor Forkhead-1	protein from Strongylocentrotus purpuratus	1.8e-42
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Bos taurus	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Forkhead box protein B1	protein from Homo sapiens	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Ailuropoda melanoleuca	2.8e-41
BLAST match view associations BLAST with Foxb1 Foxb1 Foxb1 forkhead box B1	protein from Mus musculus	2.8e-41
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Gallus gallus	3.2e-41
BLAST match view associations BLAST with LOC100301603 LOC100301603 LOC100301603 Forkhead box B1.2	protein from Oryzias latipes	7.5e-41
BLAST match view associations BLAST with foxb1a foxb1a foxb1a forkhead box B1a	gene_product from Danio rerio	9.6e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Chromosome 13 SCAF14555, whole genome shotgun sequence.	protein from Tetraodon nigroviridis	1.2e-40
BLAST match view associations BLAST with foxb1b foxb1b foxb1b forkhead box B1b	gene_product from Danio rerio	3.3e-40
BLAST match view associations BLAST with foxb2 foxb2 foxb2 Forkhead box protein B2	protein from Xenopus laevis	4.2e-40
BLAST match view associations BLAST with Ci-FoxC Ci-FoxC Ci-FoxC Transcription factor protein	protein from Ciona intestinalis	5.8e-40
BLAST match view associations BLAST with foxc2 foxc2 foxc2 Forkhead box protein C2	protein from Xenopus (Silurana) tropicalis	2.3e-39
BLAST match view associations BLAST with foxB foxB foxB FoxB protein	protein from Ciona intestinalis	2.9e-39
BLAST match view associations BLAST with Foxc1 Foxc1 Foxc1 forkhead box C1	protein from Mus musculus	3.7e-39
BLAST match view associations BLAST with FOXC1 FOXC1 FOXC1 Forkhead box protein C1	protein from Homo sapiens	4.8e-39
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Forkhead box protein C2	protein from Homo sapiens	1.6e-38
BLAST match view associations BLAST with foxc1b foxc1b foxc1b forkhead box C1b	gene_product from Danio rerio	1.6e-38
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Bos taurus	2.1e-38
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Canis lupus familiaris	2.1e-38
BLAST match view associations BLAST with Foxc2 Foxc2 Foxc2 forkhead box C2	protein from Mus musculus	2.6e-38
BLAST match view associations BLAST with Foxc1 Foxc1 Foxc1 forkhead box C1	gene from Rattus norvegicus	3.2e-38
BLAST match view associations BLAST with fd96Ca fd96Ca fd96Ca forkhead domain 96Ca	protein from Drosophila melanogaster	3.4e-38
BLAST match view associations BLAST with foxc1 foxc1 foxc1 Forkhead box protein C1	protein from Xenopus (Silurana) tropicalis	3.4e-38
BLAST match view associations BLAST with foxc2-a foxc2-a foxc2-a Forkhead box protein C2-A	protein from Xenopus laevis	3.4e-38
BLAST match view associations BLAST with foxc1a foxc1a foxc1a forkhead box C1a	gene_product from Danio rerio	3.4e-38
BLAST match view associations BLAST with croc croc croc crocodile	protein from Drosophila melanogaster	3.5e-38
BLAST match view associations BLAST with foxc2-b foxc2-b foxc2-b Forkhead box protein C2-B	protein from Xenopus laevis	5.5e-38
BLAST match view associations BLAST with foxe4 foxe4 foxe4 Forkhead box protein E4	protein from Xenopus laevis	9.3e-38
BLAST match view associations BLAST with foxc1-b foxc1-b foxc1-b Forkhead box protein C1-B	protein from Xenopus laevis	1.1e-37
BLAST match view associations BLAST with foxc1-a foxc1-a foxc1-a Forkhead box protein C1-A	protein from Xenopus laevis	1.1e-37
BLAST match view associations BLAST with FOXD1 FOXD1 FOXD1 Forkhead box protein D1	protein from Homo sapiens	1.2e-37
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Uncharacterized protein	protein from Bos taurus	1.9e-37
BLAST match view associations BLAST with Foxc2 Foxc2 Foxc2 forkhead box C2	gene from Rattus norvegicus	3.9e-37
BLAST match view associations BLAST with LOC100626570 LOC100626570 LOC100626570 Uncharacterized protein	protein from Sus scrofa	1.0e-36
BLAST match view associations BLAST with FOXD3 FOXD3 FOXD3 Forkhead box protein D3	protein from Gallus gallus	2.2e-36
BLAST match view associations BLAST with lin-31 lin-31 lin-31	gene from Caenorhabditis elegans	4.4e-36
BLAST match view associations BLAST with lin-31 lin-31 lin-31 Protein lin-31	protein from Caenorhabditis elegans	4.4e-36
BLAST match view associations BLAST with Foxd1 Foxd1 Foxd1 forkhead box D1	protein from Mus musculus	7.2e-36
BLAST match view associations BLAST with fd96Cb fd96Cb fd96Cb forkhead domain 96Cb	protein from Drosophila melanogaster	9.2e-36
BLAST match view associations BLAST with FOXF2 FOXF2 FOXF2 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-35
BLAST match view associations BLAST with FOXF2 FOXF2 FOXF2 Forkhead box protein F2	protein from Homo sapiens	2.4e-35
BLAST match view associations BLAST with Foxf2 Foxf2 Foxf2 forkhead box F2	protein from Mus musculus	3.9e-35
BLAST match view associations BLAST with foxd2 foxd2 foxd2 Forkhead box protein D2	protein from Xenopus laevis	5.1e-35
BLAST match view associations BLAST with foxd1 foxd1 foxd1 forkhead box D1	gene_product from Danio rerio	5.1e-35
BLAST match view associations BLAST with foxe3 foxe3 foxe3 forkhead box E3	gene_product from Danio rerio	5.1e-35
BLAST match view associations BLAST with FOXD4L1 FOXD4L1 FOXD4L1 Uncharacterized protein	protein from Bos taurus	2.7e-34
BLAST match view associations BLAST with foxd2 foxd2 foxd2 forkhead box D2	gene_product from Danio rerio	5.8e-34
BLAST match view associations BLAST with foxe1 foxe1 foxe1 forkhead box E1 (thyroid transcription factor 2)	gene_product from Danio rerio	1.5e-33
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy447
        (417 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

FB|FBgn0000659 - symbol:fkh "fork head" species:7227 "Dro...   666  5.2e-77   2
UNIPROTKB|Q1PA44 - symbol:FoxA "Uncharacterized protein" ...   666  2.0e-65   1
UNIPROTKB|F1MZB6 - symbol:FOXA2 "Uncharacterized protein"...   614  3.3e-65   2
UNIPROTKB|D2HNY8 - symbol:PANDA_013447 "Putative uncharac...   610  6.8e-65   2
UNIPROTKB|Q9Y261 - symbol:FOXA2 "Hepatocyte nuclear facto...   608  4.8e-64   2
UNIPROTKB|F1SAU0 - symbol:FOXA2 "Uncharacterized protein"...   608  4.8e-64   2
UNIPROTKB|Q7T1R4 - symbol:foxa2 "Forkhead box protein A2"...   608  1.3e-63   2
UNIPROTKB|F1SHK8 - symbol:FOXA1 "Uncharacterized protein"...   607  3.3e-63   2
UNIPROTKB|Q91765 - symbol:foxa2-a "Forkhead box protein A...   601  3.3e-63   2
UNIPROTKB|E2QSA5 - symbol:FOXA1 "Uncharacterized protein"...   606  4.2e-63   2
UNIPROTKB|F6UTY3 - symbol:FOXA1 "Uncharacterized protein"...   606  4.2e-63   2
UNIPROTKB|F1MNS7 - symbol:FOXA1 "Uncharacterized protein"...   605  4.2e-63   2
ZFIN|ZDB-GENE-990415-78 - symbol:foxa1 "forkhead box A1" ...   620  6.9e-63   2
UNIPROTKB|P84961 - symbol:foxa2-b "Forkhead box protein A...   606  1.1e-62   2
UNIPROTKB|B7ZAP5 - symbol:FOXA1 "Hepatocyte nuclear facto...   603  1.1e-62   2
UNIPROTKB|P55317 - symbol:FOXA1 "Hepatocyte nuclear facto...   603  1.1e-62   2
ZFIN|ZDB-GENE-980526-404 - symbol:foxa2 "forkhead box A2"...   604  1.4e-62   2
UNIPROTKB|E2RNQ6 - symbol:FOXA2 "Uncharacterized protein"...   637  2.3e-62   1
UNIPROTKB|Q6LD29 - symbol:foxa1-a "Forkhead box protein A...   607  3.7e-62   2
MGI|MGI:1347472 - symbol:Foxa1 "forkhead box A1" species:...   599  6.1e-62   2
RGD|2808 - symbol:Foxa2 "forkhead box A2" species:10116 "...   588  6.1e-62   2
UNIPROTKB|P32315 - symbol:foxa1-b "Forkhead box protein A...   603  1.3e-61   2
ZFIN|ZDB-GENE-980526-423 - symbol:foxa3 "forkhead box A3"...   601  2.6e-61   2
MGI|MGI:1347476 - symbol:Foxa2 "forkhead box A2" species:...   624  5.5e-61   1
RGD|2807 - symbol:Foxa1 "forkhead box A1" species:10116 "...   598  6.9e-61   2
UNIPROTKB|Q8AWH1 - symbol:foxa1 "Forkhead box protein A1"...   592  1.8e-60   2
UNIPROTKB|H9L130 - symbol:FOXA2 "Uncharacterized protein"...   576  1.1e-58   2
UNIPROTKB|Q6P839 - symbol:foxa4 "Forkhead box protein A4"...   549  4.9e-53   1
UNIPROTKB|P33206 - symbol:foxa4-b "Forkhead box protein A...   547  8.0e-53   1
UNIPROTKB|P33205 - symbol:foxa4-a "Forkhead box protein A...   543  2.1e-52   1
RGD|2809 - symbol:Foxa3 "forkhead box A3" species:10116 "...   532  3.1e-51   1
MGI|MGI:1347477 - symbol:Foxa3 "forkhead box A3" species:...   529  6.5e-51   1
UNIPROTKB|G3V7T9 - symbol:Foxa3 "Forkhead box A3, isoform...   527  1.1e-50   1
UNIPROTKB|Q3Y598 - symbol:FOXA3 "Hepatocyte nuclear facto...   525  1.7e-50   1
UNIPROTKB|P55318 - symbol:FOXA3 "Hepatocyte nuclear facto...   522  3.6e-50   1
UNIPROTKB|E2RNB4 - symbol:FOXA3 "Uncharacterized protein"...   514  2.5e-49   1
UNIPROTKB|F1RM41 - symbol:FOXA3 "Uncharacterized protein"...   513  3.2e-49   1
ZFIN|ZDB-GENE-990415-76 - symbol:foxa "forkhead box A seq...   490  8.8e-47   1
WB|WBGene00004013 - symbol:pha-4 species:6239 "Caenorhabd...   485  3.0e-46   1
UNIPROTKB|Q17381 - symbol:pha-4 "Defective pharyngeal dev...   485  3.0e-46   1
MGI|MGI:1347468 - symbol:Foxb2 "forkhead box B2" species:...   423  1.6e-43   2
ZFIN|ZDB-GENE-081104-320 - symbol:foxb2 "forkhead box B2"...   428  2.5e-43   2
UNIPROTKB|E2RN41 - symbol:FOXB2 "Uncharacterized protein"...   423  3.2e-43   2
UNIPROTKB|F1SIL8 - symbol:FOXB2 "Uncharacterized protein"...   423  5.2e-43   2
UNIPROTKB|B0JZ54 - symbol:foxb1 "Uncharacterized protein"...   431  6.7e-43   2
UNIPROTKB|Q5VYV0 - symbol:FOXB2 "Forkhead box protein B2"...   423  8.5e-43   2
UNIPROTKB|D4ADN4 - symbol:D4ADN4 "Uncharacterized protein...   423  1.4e-42   2
UNIPROTKB|O93529 - symbol:foxb1 "Forkhead box protein B1"...   428  1.8e-42   2
UNIPROTKB|Q9XZM6 - symbol:fkh1 "Winged helix transcriptio...   422  1.8e-42   2
UNIPROTKB|E1B7H0 - symbol:FOXB1 "Uncharacterized protein"...   438  2.8e-41   1
UNIPROTKB|E2R277 - symbol:FOXB1 "Uncharacterized protein"...   438  2.8e-41   1
UNIPROTKB|Q99853 - symbol:FOXB1 "Forkhead box protein B1"...   438  2.8e-41   1
UNIPROTKB|D2HLR1 - symbol:FOXB1 "Uncharacterized protein"...   438  2.8e-41   1
MGI|MGI:1927549 - symbol:Foxb1 "forkhead box B1" species:...   438  2.8e-41   1
UNIPROTKB|F1NK00 - symbol:Gga.51501 "Uncharacterized prot...   416  3.2e-41   2
UNIPROTKB|C1K2Y2 - symbol:Ola.4950 "Forkhead box B1.2" sp...   434  7.5e-41   1
ZFIN|ZDB-GENE-990616-47 - symbol:foxb1.2 "forkhead box B1...   433  9.6e-41   1
UNIPROTKB|Q4SM19 - symbol:FOXB1 "Uncharacterized protein"...   432  1.2e-40   1
ZFIN|ZDB-GENE-990415-77 - symbol:foxb1.1 "forkhead box B1...   428  3.3e-40   1
UNIPROTKB|Q8JIT6 - symbol:foxb2 "Forkhead box protein B2"...   427  4.2e-40   1
UNIPROTKB|Q4H3J3 - symbol:Ci-FoxC "Transcription factor p...   393  5.8e-40   2
UNIPROTKB|Q6NVT7 - symbol:foxc2 "Forkhead box protein C2"...   420  2.3e-39   1
UNIPROTKB|Q70VZ2 - symbol:foxB "FoxB protein" species:771...   419  2.9e-39   1
MGI|MGI:1347466 - symbol:Foxc1 "forkhead box C1" species:...   418  3.7e-39   1
UNIPROTKB|Q12948 - symbol:FOXC1 "Forkhead box protein C1"...   417  4.8e-39   1
UNIPROTKB|Q99958 - symbol:FOXC2 "Forkhead box protein C2"...   412  1.6e-38   1
ZFIN|ZDB-GENE-010302-2 - symbol:foxc1b "forkhead box C1b"...   412  1.6e-38   1
UNIPROTKB|F1MVT0 - symbol:FOXC2 "Uncharacterized protein"...   411  2.1e-38   1
UNIPROTKB|E2QSH3 - symbol:FOXC2 "Uncharacterized protein"...   411  2.1e-38   1
UNIPROTKB|F1NK01 - symbol:Gga.51501 "Uncharacterized prot...   410  2.6e-38   1
MGI|MGI:1347481 - symbol:Foxc2 "forkhead box C2" species:...   410  2.6e-38   1
RGD|1589718 - symbol:Foxc1 "forkhead box C1" species:1011...   417  3.2e-38   1
FB|FBgn0004897 - symbol:fd96Ca "forkhead domain 96Ca" spe...   409  3.4e-38   1
UNIPROTKB|Q68F77 - symbol:foxc1 "Forkhead box protein C1"...   409  3.4e-38   1
UNIPROTKB|Q9PVY9 - symbol:foxc2-a "Forkhead box protein C...   409  3.4e-38   1
ZFIN|ZDB-GENE-010302-1 - symbol:foxc1a "forkhead box C1a"...   409  3.4e-38   1
FB|FBgn0014143 - symbol:croc "crocodile" species:7227 "Dr...   381  3.5e-38   2
UNIPROTKB|Q9PVY8 - symbol:foxc2-b "Forkhead box protein C...   407  5.5e-38   1
UNIPROTKB|Q9PTK2 - symbol:foxe4 "Forkhead box protein E4"...   375  9.3e-38   2
UNIPROTKB|Q32NP8 - symbol:foxc1-b "Forkhead box protein C...   404  1.1e-37   1
UNIPROTKB|Q9PVZ3 - symbol:foxc1-a "Forkhead box protein C...   404  1.1e-37   1
UNIPROTKB|Q16676 - symbol:FOXD1 "Forkhead box protein D1"...   361  1.2e-37   2
UNIPROTKB|E1BCB1 - symbol:FOXB2 "Uncharacterized protein"...   402  1.9e-37   1
RGD|621703 - symbol:Foxc2 "forkhead box C2" species:10116...   399  3.9e-37   1
UNIPROTKB|I3LIV8 - symbol:FOXB1 "Uncharacterized protein"...   395  1.0e-36   1
UNIPROTKB|P79772 - symbol:FOXD3 "Forkhead box protein D3"...   368  2.2e-36   2
WB|WBGene00003017 - symbol:lin-31 species:6239 "Caenorhab...   389  4.4e-36   1
UNIPROTKB|P34683 - symbol:lin-31 "Protein lin-31" species...   389  4.4e-36   1
MGI|MGI:1347463 - symbol:Foxd1 "forkhead box D1" species:...   362  7.2e-36   2
FB|FBgn0004898 - symbol:fd96Cb "forkhead domain 96Cb" spe...   386  9.2e-36   1
UNIPROTKB|F1PW06 - symbol:FOXF2 "Uncharacterized protein"...   314  1.5e-35   3
UNIPROTKB|Q12947 - symbol:FOXF2 "Forkhead box protein F2"...   333  2.4e-35   2
MGI|MGI:1347479 - symbol:Foxf2 "forkhead box F2" species:...   336  3.9e-35   2
UNIPROTKB|Q90WN4 - symbol:foxd2 "Forkhead box protein D2"...   379  5.1e-35   1
ZFIN|ZDB-GENE-040426-2094 - symbol:foxd1 "forkhead box D1...   379  5.1e-35   1
ZFIN|ZDB-GENE-061214-6 - symbol:foxe3 "forkhead box E3" s...   379  5.1e-35   1
UNIPROTKB|G3N0F0 - symbol:FOXD4L1 "Uncharacterized protei...   342  2.7e-34   2
UNIPROTKB|F1NUD0 - symbol:F1NUD0 "Uncharacterized protein...   369  5.8e-34   1
ZFIN|ZDB-GENE-980605-6 - symbol:foxd2 "forkhead box D2" s...   369  5.8e-34   1
ZFIN|ZDB-GENE-061116-1 - symbol:foxe1 "forkhead box E1 (t...   365  1.5e-33   1

WARNING:  Descriptions of 492 database sequences were not reported due to the
          limiting value of parameter V = 100.


>FB|FBgn0000659 [details] [associations]
            symbol:fkh "fork head" species:7227 "Drosophila melanogaster"
            [GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0000976
            "transcription regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=ISS;NAS]
            [GO:0007443 "Malpighian tubule morphogenesis" evidence=IMP;TAS]
            [GO:0007439 "ectodermal digestive tract development" evidence=TAS]
            [GO:0007435 "salivary gland morphogenesis" evidence=IMP;TAS]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IMP;TAS] [GO:0007432 "salivary gland boundary
            specification" evidence=NAS] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IBA;TAS]
            [GO:0001706 "endoderm formation" evidence=TAS] [GO:0007431
            "salivary gland development" evidence=IMP;NAS] [GO:0035072
            "ecdysone-mediated induction of salivary gland cell autophagic cell
            death" evidence=IDA] [GO:0043069 "negative regulation of programmed
            cell death" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0030308 "negative regulation of cell growth" evidence=IMP]
            [GO:0040015 "negative regulation of multicellular organism growth"
            evidence=IMP] [GO:0042023 "DNA endoreduplication" evidence=IMP]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0019904 "protein domain specific binding"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0019904 GO:GO:0043066 GO:GO:0030308
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0003690 GO:GO:0040015 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0042023 GO:GO:0035072 GO:GO:0007443
            eggNOG:COG5025 GO:GO:0001706 GeneTree:ENSGT00700000104135
            EMBL:J03177 PIR:A32380 RefSeq:NP_001163762.1 RefSeq:NP_524542.1
            UniGene:Dm.22561 ProteinModelPortal:P14734 SMR:P14734
            DIP:DIP-17045N IntAct:P14734 MINT:MINT-307436 STRING:P14734
            PRIDE:P14734 EnsemblMetazoa:FBtr0085321 EnsemblMetazoa:FBtr0300259
            GeneID:43383 KEGG:dme:Dmel_CG10002 CTD:43383 FlyBase:FBgn0000659
            InParanoid:P14734 KO:K08035 OMA:HANAELC OrthoDB:EOG4280HD
            PhylomeDB:P14734 GenomeRNAi:43383 NextBio:833634 Bgee:P14734
            GermOnline:CG10002 GO:GO:0007439 InterPro:IPR018533 Pfam:PF09354
            Uniprot:P14734
        Length = 510

 Score = 666 (239.5 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
 Identities = 144/235 (61%), Positives = 168/235 (71%)

Query:     3 NMLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTP----LGGFSSNMHSMGSINGMNG 58
             ++L    ++ S   + S SM++ +N+    +GS G      +GG      SM S   M  
Sbjct:    92 SVLDSAAAVASMSASMSASMSASMNAS--MNGSMGAAAMNSMGGNCMTPSSM-SYASMGS 148

Query:    59 PNCMSTGSMGYSSNMNAACMG--GINSYNTALTTGRAELAENSPSPGALQRVARADK--T 114
             P     G+MG    M+AA M   G++    A+  G  E+   SP+  +L R +R DK  T
Sbjct:   149 P----LGNMGGCMAMSAASMSAAGLSGTYGAMPPGSREMETGSPN--SLGR-SRVDKPTT 201

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             YRRSYTHAKPPYSYISLITMAIQN+PT+MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS
Sbjct:   202 YRRSYTHAKPPYSYISLITMAIQNNPTRMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 261

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             LSFNDCFVK+PRTPDKPGKGSFWTLH DSGNMFENGCYLRRQKRFKD+KKE IRQ
Sbjct:   262 LSFNDCFVKIPRTPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKDEKKEAIRQ 316

 Score = 128 (50.1 bits), Expect = 5.2e-77, Sum P(2) = 5.2e-77
 Identities = 35/82 (42%), Positives = 46/82 (56%)

Query:   283 LAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHH- 341
             LAML    E  +S    H     + +HQ    Q  EL+AM+A+ RCHP LI   H + H 
Sbjct:   381 LAMLHANAELCLSQQPQH--VPTHHHHQHHQLQQEELSAMMAN-RCHPSLITDYHSSMHP 437

Query:   342 LKQE-YGASAVNHPFPVSRLLP 362
             LKQE  G +  +HPF ++RLLP
Sbjct:   438 LKQEPSGYTPSSHPFSINRLLP 459

 Score = 56 (24.8 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
 Identities = 31/108 (28%), Positives = 50/108 (46%)

Query:     3 NMLSHNTSLGSPGMTPSYSMNSV------INSCSPQSGSTGTPLGGFSSN-MHSMGSING 55
             N  S+  S+ SP    +Y+MNS+      ++S SPQ+ +T      FSS+ + S  ++  
Sbjct:    50 NPTSNGGSM-SPLARSAYTMNSMGLPVGGMSSVSPQAAAT------FSSSVLDSAAAVAS 102

Query:    56 MNGPNCMS-TGSMGYSSN--MNAACMGGINSYNTALTTGRAELAENSP 100
             M+     S + SM  S N  M AA M  +   N    +  +  +  SP
Sbjct:   103 MSASMSASMSASMNASMNGSMGAAAMNSMGG-NCMTPSSMSYASMGSP 149

 Score = 45 (20.9 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
 Identities = 20/88 (22%), Positives = 41/88 (46%)

Query:    21 SMNSVINSCSPQSGSTGTPLGGFSS-NMHSMGSINGMNGPNCMSTGSMGYSSNMNAACMG 79
             SM+ +  S    + S G P+GG SS +  +  + +     +  +  SM  S++M+A+   
Sbjct:    57 SMSPLARSAYTMN-SMGLPVGGMSSVSPQAAATFSSSVLDSAAAVASM--SASMSASMSA 113

Query:    80 GIN-SYNTAL-TTGRAELAENSPSPGAL 105
              +N S N ++       +  N  +P ++
Sbjct:   114 SMNASMNGSMGAAAMNSMGGNCMTPSSM 141

 Score = 44 (20.5 bits), Expect = 3.7e-68, Sum P(2) = 3.7e-68
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query:   329 HPHLIPPDHYNHHLKQEYGAS 349
             H H    DH+ HH K+  GAS
Sbjct:   344 HHHHSRLDHHQHH-KEAGGAS 363


>UNIPROTKB|Q1PA44 [details] [associations]
            symbol:FoxA "Uncharacterized protein" species:7668
            "Strongylocentrotus purpuratus" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0048665 "neuron
            fate specification" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048665 GO:GO:0051090 GO:GO:0048513 eggNOG:COG5025
            GO:GO:0009888 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            KO:K09387 EMBL:DQ459376 RefSeq:NP_001073010.1 UniGene:Spu.1709
            ProteinModelPortal:Q1PA44 SMR:Q1PA44 EnsemblMetazoa:SPU_006676tr
            GeneID:578584 KEGG:spu:578584 CTD:30539 OMA:ANSAMIS Uniprot:Q1PA44
        Length = 440

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 144/234 (61%), Positives = 166/234 (70%)

Query:     5 LSHNTSLGSPGMTPSYSMNSVIN-SCSPQSGSTGTPLGGFS----SNMHSMGSINGMNGP 59
             +S NT  G  G+    SMNS  + S +   GS  T + G +    + M SM S+ GM G 
Sbjct:    19 VSMNTMTGMTGVGSMTSMNSYSSMSTTGMPGSAITSMSGMTHAGMTGMSSMSSMAGM-GM 77

Query:    60 NCMSTGSMGYSSNMNAA-CMGGINSYNT--ALTTGRAELAENSPSPGA--LQRVARADKT 114
             N    GSMG+ ++M +   MG IN  N+  A+    A     + +  A  + R+ RADKT
Sbjct:    78 N-PGMGSMGHMNSMGSMNTMGSINGMNSMGAMNNPAAMSMRYAQAQAANSIDRI-RADKT 135

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             YRRSYTHAKPPYSYISLITMAIQ SP KM+TLS+IYQFIMDLFPFYRQNQQRWQNSIRHS
Sbjct:   136 YRRSYTHAKPPYSYISLITMAIQQSPQKMVTLSDIYQFIMDLFPFYRQNQQRWQNSIRHS 195

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             LSFNDCFVKVPRTPD+PGKGSFWTLH D+GNMFENGCYLRRQKRFK  KKE  R
Sbjct:   196 LSFNDCFVKVPRTPDRPGKGSFWTLHPDAGNMFENGCYLRRQKRFKCPKKEAQR 249


>UNIPROTKB|F1MZB6 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:2000976 "regulation of transcription from RNA
            polymerase II promoter involved in detection of glucose"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000543 "positive regulation of
            gastrulation" evidence=IEA] [GO:0090009 "primitive streak
            formation" evidence=IEA] [GO:0071542 "dopaminergic neuron
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0040019 "positive regulation of embryonic development"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0071542 GO:GO:0001701
            GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003705 GO:GO:0000978 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0031018 GO:GO:0045945 GO:GO:0030193
            GO:GO:0048468 GO:GO:0060487 GO:GO:0048665 GO:GO:0021904
            GO:GO:0060441 GO:GO:0010719 GO:GO:0023019 GO:GO:0090009
            GO:GO:0061178 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            OMA:EHKRGGL GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:DAAA02035840 IPI:IPI00688151
            Ensembl:ENSBTAT00000016463 ArrayExpress:F1MZB6 Uniprot:F1MZB6
        Length = 439

 Score = 614 (221.2 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 135/226 (59%), Positives = 155/226 (68%)

Query:     6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
             S N S GS  M+ SY    +  S +  S   G  + G S +  + G + GM GP+   + 
Sbjct:    33 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGA-MAGMSGSAGAAG-VGGM-GPHL--SP 86

Query:    66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYTHAK 123
             S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYTHAK
Sbjct:    87 SLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYTHAK 137

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDCF+K
Sbjct:   138 PPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLK 197

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             VPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++
Sbjct:   198 VPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKE 243

 Score = 68 (29.0 bits), Expect = 3.3e-65, Sum P(2) = 3.3e-65
 Identities = 19/48 (39%), Positives = 26/48 (54%)

Query:   314 QQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             QQ  + AA +     HP L PP+    HLK E+   A NHPF ++ L+
Sbjct:   322 QQQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNLM 364


>UNIPROTKB|D2HNY8 [details] [associations]
            symbol:PANDA_013447 "Putative uncharacterized protein"
            species:9646 "Ailuropoda melanoleuca" [GO:0040019 "positive
            regulation of embryonic development" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0090009 "primitive streak formation" evidence=ISS] [GO:2000543
            "positive regulation of gastrulation" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0040019 GO:GO:0090009 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 GO:GO:2000543 EMBL:GL193106 Uniprot:D2HNY8
        Length = 438

 Score = 610 (219.8 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 136/229 (59%), Positives = 159/229 (69%)

Query:     6 SHNTSLGSPGMTPSY---SMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCM 62
             S N S GS  M+ SY    M+  +   SP +G+  + +GG +    + G + GM GP+  
Sbjct:    34 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGAMAS-MGGSAG---AAG-VAGM-GPHL- 85

Query:    63 STGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYT 120
              + S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYT
Sbjct:    86 -SPSLSPLGGQAAGAMGGLTPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYT 135

Query:   121 HAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDC 180
             HAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDC
Sbjct:   136 HAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDC 195

Query:   181 FVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             F+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++
Sbjct:   196 FLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKE 244

 Score = 69 (29.3 bits), Expect = 6.8e-65, Sum P(2) = 6.8e-65
 Identities = 27/85 (31%), Positives = 36/85 (42%)

Query:   314 QQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLLPXXXXXXXXXXX 373
             QQ  + AA +     HP L PP+    HLK E+   A NHPF ++ L+            
Sbjct:   320 QQQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNLMSSEQQHHHSHHH 374

Query:   374 XXXXXKSIDLCKMYEMTGGYSTGGN 398
                  K +DL K YE    Y   G+
Sbjct:   375 HHQPHK-MDL-KAYEQVMHYPGYGS 397


>UNIPROTKB|Q9Y261 [details] [associations]
            symbol:FOXA2 "Hepatocyte nuclear factor 3-beta"
            species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0008344 "adult locomotory behavior" evidence=IEA]
            [GO:0023019 "signal transduction involved in regulation of gene
            expression" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=IEA]
            [GO:0071542 "dopaminergic neuron differentiation" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001701 "in utero
            embryonic development" evidence=IBA] [GO:0001705 "ectoderm
            formation" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007492 "endoderm development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009952
            "anterior/posterior pattern specification" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IBA]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IBA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IBA]
            [GO:0031018 "endocrine pancreas development" evidence=IDA;IBA]
            [GO:0032289 "central nervous system myelin formation" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IBA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IBA] [GO:0030193 "regulation of blood
            coagulation" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IMP] [GO:0070741 "response to
            interleukin-6" evidence=TAS] [GO:0040019 "positive regulation of
            embryonic development" evidence=ISS] [GO:0090009 "primitive streak
            formation" evidence=ISS] [GO:2000543 "positive regulation of
            gastrulation" evidence=ISS] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0000978 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding"
            evidence=IDA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IMP]
            [GO:0061178 "regulation of insulin secretion involved in cellular
            response to glucose stimulus" evidence=ISS] [GO:0033132 "negative
            regulation of glucokinase activity" evidence=ISS] [GO:0000433
            "negative regulation of transcription from RNA polymerase II
            promoter by glucose" evidence=ISS] [GO:0000432 "positive regulation
            of transcription from RNA polymerase II promoter by glucose"
            evidence=ISS] [GO:0010719 "negative regulation of epithelial to
            mesenchymal transition" evidence=IMP] [GO:2000049 "positive
            regulation of cell-cell adhesion mediated by cadherin" evidence=IC]
            [GO:2000976 "regulation of transcription from RNA polymerase II
            promoter involved in detection of glucose" evidence=ISS]
            [GO:2000971 "negative regulation of detection of glucose"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005737 GO:GO:0019904 GO:GO:0071542 GO:GO:0001701
            Pathway_Interaction_DB:hnf3apathway GO:GO:2000049 GO:GO:0008344
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016568
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0032868 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000978 GO:GO:0008301 GO:GO:0003690
            GO:GO:0045666 GO:GO:0043433 GO:GO:0040019 GO:GO:0008134
            Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0031018
            GO:GO:0070741 GO:GO:0045945 GO:GO:0007492 GO:GO:0030193
            GO:GO:0060487 GO:GO:0048665 GO:GO:0021904 GO:GO:0060441
            GO:GO:0010719 GO:GO:0023019 GO:GO:0090009 GO:GO:0061178
            eggNOG:COG5025 GO:GO:0000433 GO:GO:0032525 GO:GO:0032289
            GO:GO:0021533 KO:K08035 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621
            Pathway_Interaction_DB:hnf3pathway EMBL:AB028021 EMBL:AF147787
            EMBL:AF176110 EMBL:AL121722 EMBL:BC006545 EMBL:BC011780
            EMBL:BC019288 IPI:IPI00031773 IPI:IPI00908346 RefSeq:NP_068556.2
            RefSeq:NP_710141.1 UniGene:Hs.155651 ProteinModelPortal:Q9Y261
            SMR:Q9Y261 MINT:MINT-6610868 STRING:Q9Y261 PhosphoSite:Q9Y261
            DMDM:8134491 PaxDb:Q9Y261 PRIDE:Q9Y261 DNASU:3170
            Ensembl:ENST00000319993 Ensembl:ENST00000377115
            Ensembl:ENST00000419308 GeneID:3170 KEGG:hsa:3170 UCSC:uc002wsn.3
            CTD:3170 GeneCards:GC20M022561 HGNC:HGNC:5022 HPA:CAB001388
            MIM:600288 neXtProt:NX_Q9Y261 PharmGKB:PA201091 InParanoid:Q9Y261
            OMA:EHKRGGL OrthoDB:EOG4QRH5P PhylomeDB:Q9Y261 ChiTaRS:FOXA2
            GenomeRNAi:3170 NextBio:12568 ArrayExpress:Q9Y261 Bgee:Q9Y261
            CleanEx:HS_FOXA2 Genevestigator:Q9Y261 GermOnline:ENSG00000125798
            GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:0021779
            GO:GO:2000543 GO:GO:0000432 GO:GO:2000976 Uniprot:Q9Y261
        Length = 457

 Score = 608 (219.1 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 134/226 (59%), Positives = 154/226 (68%)

Query:     6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
             S N S GS  M+ SY    +  S +  S   G  + G   +  + G + GM GP+   + 
Sbjct:    55 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGA-MAGMGGSAGAAG-VAGM-GPHL--SP 108

Query:    66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYTHAK 123
             S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYTHAK
Sbjct:   109 SLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYTHAK 159

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDCF+K
Sbjct:   160 PPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLK 219

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             VPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++
Sbjct:   220 VPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKE 265

 Score = 63 (27.2 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query:   315 QDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             Q  + AA +     HP L PP+    HLK E+   A NHPF ++ L+
Sbjct:   341 QQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNLM 382


>UNIPROTKB|F1SAU0 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:2000976 "regulation of transcription from RNA
            polymerase II promoter involved in detection of glucose"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000543 "positive regulation of
            gastrulation" evidence=IEA] [GO:0090009 "primitive streak
            formation" evidence=IEA] [GO:0071542 "dopaminergic neuron
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0045945 "positive regulation of transcription
            from RNA polymerase III promoter" evidence=IEA] [GO:0045666
            "positive regulation of neuron differentiation" evidence=IEA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0040019 "positive regulation of embryonic development"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0071542 GO:GO:0001701
            GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003705 GO:GO:0000978 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0031018 GO:GO:0045945 GO:GO:0030193
            GO:GO:0048468 GO:GO:0060487 GO:GO:0048665 GO:GO:0021904
            GO:GO:0060441 GO:GO:0010719 GO:GO:0023019 GO:GO:0090009
            GO:GO:0061178 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            OMA:EHKRGGL GO:GO:0001705 GO:GO:2000971 GO:GO:0033132 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:CU633667
            Ensembl:ENSSSCT00000007786 Uniprot:F1SAU0
        Length = 457

 Score = 608 (219.1 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 134/226 (59%), Positives = 154/226 (68%)

Query:     6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
             S N S GS  M+ SY    +  S +  S   G  + G   +  + G + GM GP+   + 
Sbjct:    55 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGA-MAGMGGSAGAAG-VAGM-GPHL--SP 108

Query:    66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYTHAK 123
             S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYTHAK
Sbjct:   109 SLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYTHAK 159

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDCF+K
Sbjct:   160 PPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLK 219

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             VPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++
Sbjct:   220 VPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKE 265

 Score = 63 (27.2 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query:   315 QDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             Q  + AA +     HP L PP+    HLK E+   A NHPF ++ L+
Sbjct:   341 QQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNLM 382


>UNIPROTKB|Q7T1R4 [details] [associations]
            symbol:foxa2 "Forkhead box protein A2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001705 "ectoderm formation"
            evidence=IBA] [GO:0001707 "mesoderm formation" evidence=ISS]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007492 "endoderm development" evidence=IBA]
            [GO:0007596 "blood coagulation" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009952 "anterior/posterior
            pattern specification" evidence=IBA] [GO:0019904 "protein domain
            specific binding" evidence=IBA] [GO:0021533 "cell differentiation
            in hindbrain" evidence=IBA] [GO:0021779 "oligodendrocyte cell fate
            commitment" evidence=IBA] [GO:0021904 "dorsal/ventral neural tube
            patterning" evidence=IBA] [GO:0031018 "endocrine pancreas
            development" evidence=IBA] [GO:0032289 "central nervous system
            myelin formation" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048665 "neuron fate specification" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0045893 GO:GO:0009952
            GO:GO:0007596 GO:GO:0043565 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0001707 GO:GO:0045666 GO:GO:0008134
            GO:GO:0031018 GO:GO:0007492 GO:GO:0060487 GO:GO:0048665
            GO:GO:0051090 GO:GO:0021904 GO:GO:0060441 eggNOG:COG5025
            GeneTree:ENSGT00700000104475 GO:GO:0032289 HSSP:Q99958
            GO:GO:0021533 KO:K08035 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 OrthoDB:EOG466VMM CTD:3170
            GO:GO:0001705 GO:GO:0021779 EMBL:AY260736 EMBL:CR848398
            EMBL:BC088590 RefSeq:NP_989423.1 UniGene:Str.8107
            ProteinModelPortal:Q7T1R4 SMR:Q7T1R4 STRING:Q7T1R4
            Ensembl:ENSXETT00000056642 GeneID:395063 KEGG:xtr:395063
            Xenbase:XB-GENE-480476 InParanoid:Q7T1R4 Bgee:Q7T1R4 Uniprot:Q7T1R4
        Length = 434

 Score = 608 (219.1 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
 Identities = 132/229 (57%), Positives = 157/229 (68%)

Query:     8 NTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPL--GGFSSNMHSMGSING-MNGPNCMST 64
             N  L    M    SM+++  S +  +GS        G S ++  M    G M G   M T
Sbjct:    32 NAGLSMNPMNTYMSMSAMSTSANMTAGSMNMSYVNTGMSPSLTGMSPGTGAMTG---MGT 88

Query:    65 GSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSP--GA--LQRVARADKTYRRSYT 120
             G    +S+++ + M  +++  T++         NS SP  G   + R +R  KTYRRSYT
Sbjct:    89 GVASMASHLSPS-MSPMSAQATSMNALAPYTNMNSMSPIYGQSNINR-SRDPKTYRRSYT 146

Query:   121 HAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDC 180
             HAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDC
Sbjct:   147 HAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDC 206

Query:   181 FVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             F+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +KK  +R+
Sbjct:   207 FLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKPSLRE 255

 Score = 59 (25.8 bits), Expect = 1.3e-63, Sum P(2) = 1.3e-63
 Identities = 19/68 (27%), Positives = 26/68 (38%)

Query:   331 HLIPPDHYNHHLKQEYGASAVNHPFPVSRLLPXXXXXXXXXXXXXXXXKSIDLCKMYEMT 390
             H +       HLK E+  S  NHPF ++ L+                   +DL K YE  
Sbjct:   328 HSVLSHEAQSHLKPEHHYS-FNHPFSINNLMSSEQQHHHHHHHNHHHHHKMDL-KAYEQV 385

Query:   391 GGYSTGGN 398
               YS  G+
Sbjct:   386 MHYSGYGS 393

 Score = 45 (20.9 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query:   308 YHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHH 341
             +H SF+   S +  +++S + H H    +H++HH
Sbjct:   343 HHYSFNHPFS-INNLMSSEQQHHHHHHHNHHHHH 375


>UNIPROTKB|F1SHK8 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:CT737389 RefSeq:XP_001929311.1 UniGene:Ssc.61132
            Ensembl:ENSSSCT00000002172 GeneID:100156502 KEGG:ssc:100156502
            Uniprot:F1SHK8
        Length = 468

 Score = 607 (218.7 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 128/230 (55%), Positives = 154/230 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSM-GSING 55
             M   ++ NT   S  MTP S++M   N  + +        G P GG +  M+SM   +  
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGAMNSMTAGVTA 102

Query:    56 MNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KT 114
             M     +S G MG      AA M G+  Y  A+    + +A    + G  +     D KT
Sbjct:   103 MG--TTLSPGGMGAMGAQPAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDTKT 160

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             ++RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHS
Sbjct:   161 FKRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHS 220

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             LSFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   221 LSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 270

 Score = 56 (24.8 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query:   321 AMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             A+V+    HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   362 ALVSVPPSHPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 402


>UNIPROTKB|Q91765 [details] [associations]
            symbol:foxa2-a "Forkhead box protein A2-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0005634 "nucleus" evidence=IC;ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045893 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001707 HSSP:Q99958
            KO:K08035 InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            CTD:3170 EMBL:L25637 PIR:I51436 RefSeq:NP_001165629.1
            UniGene:Xl.40286 ProteinModelPortal:Q91765 SMR:Q91765
            GeneID:100127318 KEGG:xla:100127318 Xenbase:XB-GENE-865381
            Uniprot:Q91765
        Length = 434

 Score = 601 (216.6 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 134/234 (57%), Positives = 161/234 (68%)

Query:     9 TSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMG-----SINGMN-GPNCM 62
             +S+G+  M    SMN +    S  +  T   +   S NM  +      S+ GM+ G   M
Sbjct:    26 SSVGN--MNAGLSMNPMNTYMSMSAMRTSANMTASSMNMSYVNTGMSPSLTGMSPGTGAM 83

Query:    63 S---TGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSP--GA--LQRVARADKTY 115
             +   TG    +S+++ + M  +++  TA+         NS SP  G   + R +R  KTY
Sbjct:    84 TGMGTGVPSMASHLSPS-MIPMSAQTTAMNALAPYTNINSMSPIYGQSNINR-SRDPKTY 141

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             RRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSL
Sbjct:   142 RRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSL 201

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             SFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +KK  +R+
Sbjct:   202 SFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKKPSLRE 255

 Score = 62 (26.9 bits), Expect = 3.3e-63, Sum P(2) = 3.3e-63
 Identities = 19/68 (27%), Positives = 27/68 (39%)

Query:   331 HLIPPDHYNHHLKQEYGASAVNHPFPVSRLLPXXXXXXXXXXXXXXXXKSIDLCKMYEMT 390
             H +       HLK E+  S  NHPF ++ L+                   +DL K YE  
Sbjct:   328 HSVLSHEAQSHLKPEHHYS-FNHPFSINNLMSSEQQHHHHHHHNHHHHHKMDL-KAYEQV 385

Query:   391 GGYSTGGN 398
               YS+ G+
Sbjct:   386 MHYSSYGS 393

 Score = 45 (20.9 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query:   308 YHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHH 341
             +H SF+   S +  +++S + H H    +H++HH
Sbjct:   343 HHYSFNHPFS-INNLMSSEQQHHHHHHHNHHHHH 375


>UNIPROTKB|E2QSA5 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0060743 "epithelial cell maturation involved
            in prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 GO:GO:0060738
            GO:GO:0060528 Ensembl:ENSCAFT00000021805 Uniprot:E2QSA5
        Length = 452

 Score = 606 (218.4 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 126/229 (55%), Positives = 153/229 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGM 56
             M   ++ NT   S  MTP S++M   N  + +        G P GG + +M+SM +    
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGSMNSMTAAGVT 102

Query:    57 NGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTY 115
                  +S G MG      AA M G+  Y  A+    + +     + G  +     D KT+
Sbjct:   103 AMGTALSPGGMGAMGAQPAASMNGLGPYAAAMNPCMSPMGYAPSNLGRSRAGGGGDAKTF 162

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 56 (24.8 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query:   321 AMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             A+V+    HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   374 ALVSVPPSHPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 414


>UNIPROTKB|F6UTY3 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GeneTree:ENSGT00700000104475 InterPro:IPR018533
            Pfam:PF09354 OMA:ALEPSYY Ensembl:ENSCAFT00000021805
            EMBL:AAEX03005682 EMBL:AAEX03005683 Uniprot:F6UTY3
        Length = 481

 Score = 606 (218.4 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 126/229 (55%), Positives = 153/229 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGM 56
             M   ++ NT   S  MTP S++M   N  + +        G P GG + +M+SM +    
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGSMNSMTAAGVT 102

Query:    57 NGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTY 115
                  +S G MG      AA M G+  Y  A+    + +     + G  +     D KT+
Sbjct:   103 AMGTALSPGGMGAMGAQPAASMNGLGPYAAAMNPCMSPMGYAPSNLGRSRAGGGGDAKTF 162

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 56 (24.8 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query:   321 AMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             A+V+    HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   374 ALVSVPPSHPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 414


>UNIPROTKB|F1MNS7 [details] [associations]
            symbol:FOXA1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060743 "epithelial cell maturation involved in
            prostate gland development" evidence=IEA] [GO:0060741 "prostate
            gland stromal morphogenesis" evidence=IEA] [GO:0060740 "prostate
            gland epithelium morphogenesis" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060528 "secretory columnal luminar
            epithelial cell differentiation involved in prostate glandular
            acinus development" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0048665 "neuron fate
            specification" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042593 "glucose
            homeostasis" evidence=IEA] [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0033148 "positive regulation of intracellular
            estrogen receptor signaling pathway" evidence=IEA] [GO:0032355
            "response to estradiol stimulus" evidence=IEA] [GO:0010719
            "negative regulation of epithelial to mesenchymal transition"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0051091 GO:GO:0032355 GO:GO:0045931 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0006338 GO:GO:0044212 GO:GO:0045666
            GO:GO:0042445 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0060441 GO:GO:0010719 GO:GO:0060741
            GeneTree:ENSGT00700000104475 GO:GO:0060743 InterPro:IPR018533
            Pfam:PF09354 CTD:3169 KO:K09387 OMA:ALEPSYY GO:GO:0060738
            GO:GO:0060528 EMBL:DAAA02052774 IPI:IPI00923961
            RefSeq:NP_001192958.1 UniGene:Bt.88447 Ensembl:ENSBTAT00000061052
            GeneID:503579 KEGG:bta:503579 NextBio:20866216 Uniprot:F1MNS7
        Length = 468

 Score = 605 (218.0 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 130/232 (56%), Positives = 155/232 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSM-GSING 55
             M   ++ NT   S  MTP S++M   N  + +        G P GG +  M+SM   +  
Sbjct:    44 MNTYMTMNTMSTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGAMNSMTAGVTA 102

Query:    56 MNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD--- 112
             M     +S G MG      AA M G+  Y  A+    + +A  +PS     R A      
Sbjct:   103 MG--TTLSPGGMGAMGAQPAASMNGLGPYAAAMNPCMSPMAY-APSNLGRSRAAGGGGDA 159

Query:   113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
             KT++RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIR
Sbjct:   160 KTFKRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIR 219

Query:   173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             HSLSFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   220 HSLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 57 (25.1 bits), Expect = 4.2e-63, Sum P(2) = 4.2e-63
 Identities = 14/42 (33%), Positives = 22/42 (52%)

Query:   321 AMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             A+V+    HP H + P     H+K +   S  NHPF ++ L+
Sbjct:   362 ALVSVPPSHPAHALAPHESQLHMKGDPHYS-FNHPFSINNLM 402


>ZFIN|ZDB-GENE-990415-78 [details] [associations]
            symbol:foxa1 "forkhead box A1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA;IBA] [GO:0048319 "axial
            mesoderm morphogenesis" evidence=IGI] [GO:0060487 "lung epithelial
            cell differentiation" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0010817 "regulation of hormone levels"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-990415-78 GO:GO:0019904 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817
            GO:GO:0060441 GO:GO:0048319 HSSP:Q99958 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:AY247950 IPI:IPI00496878
            UniGene:Dr.75817 ProteinModelPortal:Q800Q3 SMR:Q800Q3 STRING:Q800Q3
            InParanoid:Q800Q3 ArrayExpress:Q800Q3 Uniprot:Q800Q3
        Length = 427

 Score = 620 (223.3 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
 Identities = 135/229 (58%), Positives = 163/229 (71%)

Query:     1 MENMLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPN 60
             M NM S+     S  MT S S N  ++  +P  G+  +P  G  + M + G++NGM G  
Sbjct:    41 MNNMNSYMGMSTSGNMTSS-SFN--MSYANPALGAGLSP--GTMAGMPTGGAMNGMGG-G 94

Query:    61 CMSTGSMGYSSNMNA-----ACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTY 115
               S G+    SN+NA     + M  +N Y T+++   + +    P+   L R AR +KT+
Sbjct:    95 VSSMGTALSPSNLNAMTAQHSSMNALNPY-TSMSPTMSSMTYAQPN---LNR-ARDNKTF 149

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             RRSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   150 RRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 209

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK DKK
Sbjct:   210 SFNDCFVKVSRSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCDKK 258

 Score = 40 (19.1 bits), Expect = 6.9e-63, Sum P(2) = 6.9e-63
 Identities = 9/21 (42%), Positives = 13/21 (61%)

Query:   341 HLKQEYGASAVNHPFPVSRLL 361
             HLK +   S  NHPF ++ L+
Sbjct:   346 HLKGDPHYS-FNHPFSINNLM 365


>UNIPROTKB|P84961 [details] [associations]
            symbol:foxa2-b "Forkhead box protein A2-B" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0001707
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            ProteinModelPortal:P84961 SMR:P84961 Uniprot:P84961
        Length = 433

 Score = 606 (218.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 137/234 (58%), Positives = 158/234 (67%)

Query:     9 TSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMG-----SINGMNGPNCMS 63
             +S+G+  M    SMN +    S  + ST   +   S NM  +      SI GM+ P   +
Sbjct:    24 SSVGN--MNAGLSMNPMNTYMSMSAMSTSANMTASSMNMSYVNTGMSPSITGMS-PGTGA 80

Query:    64 TGSMGYSSNMNAACMGGINSYNTALTTGRAELAE----NSPSP--GA--LQRVARADKTY 115
                MG      A+ +    S  +A  T    LA     NS SP  G   + R +R  KTY
Sbjct:    81 MPGMGNGVASMASHLSPSMSPMSAQATSMNALAPYTNINSMSPIYGQSNINR-SRDPKTY 139

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             RRSYTHAKPPYSYISLITMAIQ SP+KMLTLSE+YQ+IMDLFPFYRQNQQRWQNSIRHSL
Sbjct:   140 RRSYTHAKPPYSYISLITMAIQQSPSKMLTLSEVYQWIMDLFPFYRQNQQRWQNSIRHSL 199

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             SFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK DKK  +R+
Sbjct:   200 SFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKKPSLRE 253

 Score = 52 (23.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 18/56 (32%), Positives = 24/56 (42%)

Query:   310 QSFHQQDSELAAMVASGRCH----PHLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             +S H    E A   AS   H     H +       HLK E+  S  NHPF ++ L+
Sbjct:   301 KSSHGLSPEHATSPASQAQHLLSQHHSVLSHEAQSHLKPEHHYS-FNHPFSINNLM 355

 Score = 40 (19.1 bits), Expect = 2.0e-61, Sum P(2) = 2.0e-61
 Identities = 10/34 (29%), Positives = 16/34 (47%)

Query:   308 YHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHH 341
             +H SF+   S    M +  + H H    +H +HH
Sbjct:   341 HHYSFNHPFSINNLMSSEQQHHHHHHHHNHQHHH 374


>UNIPROTKB|B7ZAP5 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0008134 "transcription factor
            binding" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
            [GO:0042445 "hormone metabolic process" evidence=IEA] [GO:0042593
            "glucose homeostasis" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060528 "secretory columnal
            luminar epithelial cell differentiation involved in prostate
            glandular acinus development" evidence=IEA] [GO:0060738
            "epithelial-mesenchymal signaling involved in prostate gland
            development" evidence=IEA] [GO:0060740 "prostate gland epithelium
            morphogenesis" evidence=IEA] [GO:0060741 "prostate gland stromal
            morphogenesis" evidence=IEA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0042593 GO:GO:0006338
            GO:GO:0003690 GO:GO:0045666 GO:GO:0042445 GO:GO:0060740
            GO:GO:0060487 GO:GO:0048665 GO:GO:0060441 GO:GO:0060741
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:AL121790
            HGNC:HGNC:5021 HOVERGEN:HBG006621 ChiTaRS:FOXA1 GO:GO:0060738
            GO:GO:0060528 EMBL:AK316360 IPI:IPI00024387 SMR:B7ZAP5
            STRING:B7ZAP5 Ensembl:ENST00000540786 Uniprot:B7ZAP5
        Length = 439

 Score = 603 (217.3 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 126/229 (55%), Positives = 152/229 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGM 56
             M   ++ NT   S  MTP S++M   N  + +        G P GG +  M+SM +    
Sbjct:    11 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGAMNSMTAAGVT 69

Query:    57 NGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTY 115
                  +S   MG      AA M G+  Y  A+    + +A    + G  +     D KT+
Sbjct:    70 AMGTALSPSGMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTF 129

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   130 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 189

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   190 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 238

 Score = 55 (24.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query:   319 LAAMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             LA++ AS   HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   334 LASVPAS---HPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 373


>UNIPROTKB|P55317 [details] [associations]
            symbol:FOXA1 "Hepatocyte nuclear factor 3-alpha"
            species:9606 "Homo sapiens" [GO:0042445 "hormone metabolic process"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IBA]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IBA] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IBA] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IBA] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP;IDA]
            [GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IMP] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IMP] [GO:0033148 "positive regulation
            of intracellular estrogen receptor signaling pathway" evidence=IMP]
            [GO:0032355 "response to estradiol stimulus" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0001077 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISS] [GO:0010719 "negative regulation of
            epithelial to mesenchymal transition" evidence=IMP] [GO:2000049
            "positive regulation of cell-cell adhesion mediated by cadherin"
            evidence=IC] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:2000049
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0001077 GO:GO:0006338 GO:GO:0008301 GO:GO:0009790
            GO:GO:0044212 EMBL:CH471078 GO:GO:0003690 GO:GO:0045666
            GO:GO:0008134 GO:GO:0042445 GO:GO:0007389 GO:GO:0033148
            GO:GO:0060740 GO:GO:0060487 GO:GO:0048665 GO:GO:0010817
            GO:GO:0060441 GO:GO:0010719 GO:GO:0060741 eggNOG:COG5025
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 EMBL:U39840
            EMBL:AF176112 EMBL:AF176111 EMBL:AF303743 EMBL:AF303742
            EMBL:AK313785 EMBL:AL121790 EMBL:BC033890 IPI:IPI01014973
            PIR:S70357 RefSeq:NP_004487.2 UniGene:Hs.163484
            ProteinModelPortal:P55317 SMR:P55317 DIP:DIP-57138N IntAct:P55317
            MINT:MINT-2804254 STRING:P55317 PhosphoSite:P55317 DMDM:296434509
            PaxDb:P55317 PRIDE:P55317 DNASU:3169 Ensembl:ENST00000250448
            GeneID:3169 KEGG:hsa:3169 UCSC:uc001wuf.3 CTD:3169
            GeneCards:GC14M038059 H-InvDB:HIX0011609 HGNC:HGNC:5021
            HPA:CAB011595 MIM:602294 neXtProt:NX_P55317 PharmGKB:PA201090
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 InParanoid:P55317 KO:K09387
            OMA:ALEPSYY OrthoDB:EOG4C2HCT PhylomeDB:P55317
            Pathway_Interaction_DB:hnf3pathway ChiTaRS:FOXA1 GenomeRNAi:3169
            NextBio:12564 ArrayExpress:P55317 Bgee:P55317 CleanEx:HS_FOXA1
            Genevestigator:P55317 GO:GO:0060738 GO:GO:0060528 Uniprot:P55317
        Length = 472

 Score = 603 (217.3 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 126/229 (55%), Positives = 152/229 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGM 56
             M   ++ NT   S  MTP S++M   N  + +        G P GG +  M+SM +    
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGAMNSMTAAGVT 102

Query:    57 NGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTY 115
                  +S   MG      AA M G+  Y  A+    + +A    + G  +     D KT+
Sbjct:   103 AMGTALSPSGMGAMGAQQAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTF 162

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 55 (24.4 bits), Expect = 1.1e-62, Sum P(2) = 1.1e-62
 Identities = 17/44 (38%), Positives = 24/44 (54%)

Query:   319 LAAMVASGRCHP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             LA++ AS   HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   367 LASVPAS---HPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 406


>ZFIN|ZDB-GENE-980526-404 [details] [associations]
            symbol:foxa2 "forkhead box A2" species:7955 "Danio
            rerio" [GO:0019904 "protein domain specific binding"
            evidence=IEA;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0008134 "transcription factor binding" evidence=IEA;IBA]
            [GO:0003677 "DNA binding" evidence=IEA;ISS] [GO:0007418 "ventral
            midline development" evidence=IMP] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0031018 "endocrine
            pancreas development" evidence=IBA] [GO:0021904 "dorsal/ventral
            neural tube patterning" evidence=IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0007596 "blood coagulation"
            evidence=IBA] [GO:0009952 "anterior/posterior pattern
            specification" evidence=IBA] [GO:0060441 "epithelial tube branching
            involved in lung morphogenesis" evidence=IBA] [GO:0001705 "ectoderm
            formation" evidence=IBA] [GO:0021533 "cell differentiation in
            hindbrain" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0003705 "RNA polymerase II
            distal enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IMP]
            [GO:0032289 "central nervous system myelin formation" evidence=IMP]
            [GO:0007492 "endoderm development" evidence=IGI;IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980526-404 GO:GO:0019904 GO:GO:0009952 GO:GO:0007596
            GO:GO:0043565 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0031018 GO:GO:0007492
            GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0021904
            GO:GO:0060441 GO:GO:0033504 GO:GO:0007418 GO:GO:0048319
            GO:GO:0032289 GO:GO:0021533 InterPro:IPR018533 Pfam:PF09354
            HOVERGEN:HBG006621 GO:GO:0001705 GO:GO:0021779 EMBL:BC086703
            IPI:IPI00502799 UniGene:Dr.483 ProteinModelPortal:Q5PRD6 SMR:Q5PRD6
            STRING:Q5PRD6 InParanoid:Q5PRD6 ArrayExpress:Q5PRD6 Uniprot:Q5PRD6
        Length = 409

 Score = 604 (217.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 132/226 (58%), Positives = 157/226 (69%)

Query:     4 MLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTG-TP-LGGFSSNMHSMGSIN-GMNGPN 60
             M S NT +   GM+ + +M +  N+ +    +TG +P + G S    +M  +  GM G +
Sbjct:    38 MNSMNTYMTMSGMSSTANMTAA-NTMNMSYVNTGMSPSMTGMSPGTGAMAGMGAGMTGMS 96

Query:    61 CMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGA--LQRVARADKTYRRS 118
                + +M   +   A  M  + SY+         +   SP  G   + R +R  KTYRRS
Sbjct:    97 AALSPTMSPMA-AQAPSMNALTSYSN--------MNAMSPMYGQSNINR-SRDPKTYRRS 146

Query:   119 YTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFN 178
             YTHAKPPYSYISLITMAIQ SP+KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFN
Sbjct:   147 YTHAKPPYSYISLITMAIQQSPSKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFN 206

Query:   179 DCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             DCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK DKK
Sbjct:   207 DCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCDKK 252

 Score = 53 (23.7 bits), Expect = 1.4e-62, Sum P(2) = 1.4e-62
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query:   331 HLIPPDH----YNHHLKQEYGASAVNHPFPVSRLL 361
             HL+   H    +  HLK E+  S  NHPF ++ L+
Sbjct:   315 HLLAQHHSVLAHEGHLKPEHHYS-FNHPFSINNLM 348


>UNIPROTKB|E2RNQ6 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:2000543 "positive regulation of gastrulation"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0090009 "primitive streak
            formation" evidence=ISS] [GO:0040019 "positive regulation of
            embryonic development" evidence=ISS] [GO:2000976 "regulation of
            transcription from RNA polymerase II promoter involved in detection
            of glucose" evidence=IEA] [GO:2000971 "negative regulation of
            detection of glucose" evidence=IEA] [GO:0071542 "dopaminergic
            neuron differentiation" evidence=IEA] [GO:0061178 "regulation of
            insulin secretion involved in cellular response to glucose
            stimulus" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0048665
            "neuron fate specification" evidence=IEA] [GO:0048468 "cell
            development" evidence=IEA] [GO:0045945 "positive regulation of
            transcription from RNA polymerase III promoter" evidence=IEA]
            [GO:0045666 "positive regulation of neuron differentiation"
            evidence=IEA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0033132 "negative regulation of glucokinase
            activity" evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0031018 "endocrine pancreas
            development" evidence=IEA] [GO:0030193 "regulation of blood
            coagulation" evidence=IEA] [GO:0023019 "signal transduction
            involved in regulation of gene expression" evidence=IEA]
            [GO:0021904 "dorsal/ventral neural tube patterning" evidence=IEA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IEA]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=IEA] [GO:0008344 "adult locomotory behavior"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001705 "ectoderm
            formation" evidence=IEA] [GO:0001701 "in utero embryonic
            development" evidence=IEA] [GO:0000978 "RNA polymerase II core
            promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0000433 "negative regulation of transcription
            from RNA polymerase II promoter by glucose" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0071542
            GO:GO:0001701 GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003705 GO:GO:0000978 GO:GO:0045666
            GO:GO:0043433 GO:GO:0040019 GO:GO:0031018 GO:GO:0045945
            GO:GO:0030193 GO:GO:0048468 GO:GO:0060487 GO:GO:0048665
            GO:GO:0021904 GO:GO:0060441 GO:GO:0010719 GO:GO:0023019
            GO:GO:0090009 GO:GO:0061178 GeneTree:ENSGT00700000104475
            GO:GO:0000433 GO:GO:0032525 GO:GO:0021533 KO:K08035
            InterPro:IPR018533 Pfam:PF09354 CTD:3170 OMA:EHKRGGL GO:GO:0001705
            GO:GO:2000971 GO:GO:0033132 GO:GO:2000543 GO:GO:0000432
            GO:GO:2000976 EMBL:AAEX03013741 RefSeq:XP_542865.2
            Ensembl:ENSCAFT00000008326 GeneID:485742 KEGG:cfa:485742
            Uniprot:E2RNQ6
        Length = 468

 Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
 Identities = 164/361 (45%), Positives = 196/361 (54%)

Query:     6 SHNTSLGSPGMTPSY---SMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCM 62
             S N S GS  M+ SY    M+  +   SP +G+  + +GG +    + G + GM GP+  
Sbjct:    61 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGAMAS-MGGSAG---AAG-VAGM-GPHL- 112

Query:    63 STGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYT 120
              + S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYT
Sbjct:   113 -SPSLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYT 162

Query:   121 HAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDC 180
             HAKPPYSY SLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDC
Sbjct:   163 HAKPPYSYKSLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDC 222

Query:   181 FVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQXXXXXXXXXXX 240
             F+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++           
Sbjct:   223 FLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEASGAAGGGKKA 282

Query:   241 XXXXXXXXXXXXXXXXXXXXXXXXXXDAGGKKSPETKPHLSELAMLGLTKEDAMSAGLLH 300
                                             SP  + H  +   LG  K     A  L 
Sbjct:   283 TAAAQASQGQLGEAAGPASETAAGTESPHSSASP-CQEH--KRGPLGELK--GTPAAALS 337

Query:   301 SDFQQNSYHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRL 360
                   S  Q   QQ  + AA +     HP L PP+    HLK E+   A NHPF ++ L
Sbjct:   338 PPEPAPSPGQQQQQQQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNL 392

Query:   361 L 361
             +
Sbjct:   393 M 393


>UNIPROTKB|Q6LD29 [details] [associations]
            symbol:foxa1-a "Forkhead box protein A1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 EMBL:U04873
            ProteinModelPortal:Q6LD29 SMR:Q6LD29 Uniprot:Q6LD29
        Length = 429

 Score = 607 (218.7 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
 Identities = 132/232 (56%), Positives = 162/232 (69%)

Query:     2 ENMLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGS-----INGM 56
             + + S NT +    M+ S +M +   S +   G++G   G   S M  MG+     +NGM
Sbjct:    36 QGLASMNTYMTMNPMSSSSNMTAA-GSFNMSYGNSGLGAGLSPSGMSGMGAGAASAMNGM 94

Query:    57 NGPNCMSTGSMGYSSNMNA--ACMGGINSYN-TALTTGRAELAENSPSPGALQRVARADK 113
              G    S G+    SNMNA  A    +NS + +++  G + +A  S +   + R AR  K
Sbjct:    95 -GSGVPSMGTALSPSNMNAMSAQQASMNSLSYSSMNPGMSPMAYGSSN---MNR-ARDTK 149

Query:   114 TYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 173
             T+RRSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRH
Sbjct:   150 TFRRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRH 209

Query:   174 SLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             SLSFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K +
Sbjct:   210 SLSFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKTQ 261

 Score = 46 (21.3 bits), Expect = 3.7e-62, Sum P(2) = 3.7e-62
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query:   337 HYNH-HLKQEYGASAVNHPFPVSRLL 361
             H +H HLK +   S  NHPF ++ L+
Sbjct:   339 HESHIHLKGDPHYS-FNHPFSINNLM 363


>MGI|MGI:1347472 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA;IMP] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISO;IDA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006338 "chromatin remodeling"
            evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=ISO;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
            "regulation of gene expression" evidence=IGI] [GO:0010719 "negative
            regulation of epithelial to mesenchymal transition" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=ISO;IBA] [GO:0030324
            "lung development" evidence=IGI] [GO:0032355 "response to estradiol
            stimulus" evidence=ISO] [GO:0033148 "positive regulation of
            intracellular estrogen receptor signaling pathway" evidence=ISO]
            [GO:0035239 "tube morphogenesis" evidence=IMP] [GO:0042445 "hormone
            metabolic process" evidence=IMP] [GO:0042593 "glucose homeostasis"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO;IDA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISO] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IGI;IMP] [GO:0045931 "positive regulation
            of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IGI;IDA] [GO:0048665 "neuron fate specification"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051091
            "positive regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISO] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IGI] [GO:0060487
            "lung epithelial cell differentiation" evidence=IGI] [GO:0060528
            "secretory columnal luminar epithelial cell differentiation
            involved in prostate glandular acinus development" evidence=IMP]
            [GO:0060738 "epithelial-mesenchymal signaling involved in prostate
            gland development" evidence=IGI] [GO:0060740 "prostate gland
            epithelium morphogenesis" evidence=IMP] [GO:0060741 "prostate gland
            stromal morphogenesis" evidence=IMP] [GO:0060743 "epithelial cell
            maturation involved in prostate gland development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347472
            GO:GO:0019904 GO:GO:0051091 GO:GO:0032355 GO:GO:0045931
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0042593 GO:GO:0005667 GO:GO:0003705 GO:GO:0006338
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0045666 GO:GO:0008134 GO:GO:0042445
            GO:GO:0007389 GO:GO:0033148 GO:GO:0060740 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0060441 GO:GO:0010719
            GO:GO:0060741 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            GO:GO:0060743 InterPro:IPR018533 Pfam:PF09354 CTD:3169
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 KO:K09387 OMA:ALEPSYY
            GO:GO:0060738 GO:GO:0060528 EMBL:X74936 EMBL:U44752 EMBL:BC096524
            IPI:IPI00310116 PIR:A54258 RefSeq:NP_032285.2 UniGene:Mm.4578
            ProteinModelPortal:P35582 SMR:P35582 STRING:P35582
            PhosphoSite:P35582 PRIDE:P35582 Ensembl:ENSMUST00000044380
            GeneID:15375 KEGG:mmu:15375 UCSC:uc007nps.1 InParanoid:Q4VA63
            OrthoDB:EOG466VMM NextBio:288026 Bgee:P35582 CleanEx:MM_FOXA1
            Genevestigator:P35582 GermOnline:ENSMUSG00000035451 Uniprot:P35582
        Length = 468

 Score = 599 (215.9 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
 Identities = 125/229 (54%), Positives = 152/229 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGM 56
             M   ++ NT   S  MTP S++M   N+ + +        G P G  +  M+SM +    
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANTGLGAGLSPGAVAGMP-GASAGAMNSMTAAGVT 102

Query:    57 NGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-KTY 115
                  +S G MG      A  M G+  Y  A+    + +A    + G  +     D KT+
Sbjct:   103 AMGTALSPGGMGSMGAQPATSMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAKTF 162

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHSL
Sbjct:   163 KRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHSL 222

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   223 SFNDCFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 52 (23.4 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
 Identities = 13/34 (38%), Positives = 18/34 (52%)

Query:   329 HP-HLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             HP H + P     HLK +   S  NHPF ++ L+
Sbjct:   370 HPAHGLAPHESQLHLKGDPHYS-FNHPFSINNLM 402


>RGD|2808 [details] [associations]
            symbol:Foxa2 "forkhead box A2" species:10116 "Rattus norvegicus"
          [GO:0000432 "positive regulation of transcription from RNA polymerase
          II promoter by glucose" evidence=IEA;ISO] [GO:0000433 "negative
          regulation of transcription from RNA polymerase II promoter by
          glucose" evidence=IEA;ISO] [GO:0000978 "RNA polymerase II core
          promoter proximal region sequence-specific DNA binding"
          evidence=IEA;ISO;IDA] [GO:0001077 "RNA polymerase II core promoter
          proximal region sequence-specific DNA binding transcription factor
          activity involved in positive regulation of transcription"
          evidence=IDA] [GO:0001701 "in utero embryonic development"
          evidence=IEA;ISO;IBA] [GO:0001705 "ectoderm formation"
          evidence=IEA;ISO;IBA] [GO:0001708 "cell fate specification"
          evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
          "double-stranded DNA binding" evidence=IDA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=ISO;IDA;IMP] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IEA;ISO;IBA] [GO:0005515 "protein binding" evidence=IPI]
          [GO:0005634 "nucleus" evidence=IEA;ISO;IDA] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0005737 "cytoplasm"
          evidence=IEA] [GO:0006355 "regulation of transcription,
          DNA-dependent" evidence=ISO;IDA] [GO:0006357 "regulation of
          transcription from RNA polymerase II promoter" evidence=ISO]
          [GO:0007389 "pattern specification process" evidence=ISO] [GO:0007492
          "endoderm development" evidence=IBA] [GO:0007596 "blood coagulation"
          evidence=IBA] [GO:0008134 "transcription factor binding"
          evidence=IEA;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
          [GO:0008344 "adult locomotory behavior" evidence=IEA;ISO] [GO:0009653
          "anatomical structure morphogenesis" evidence=ISO] [GO:0009952
          "anterior/posterior pattern specification" evidence=ISO;IBA]
          [GO:0009953 "dorsal/ventral pattern formation" evidence=ISO]
          [GO:0010468 "regulation of gene expression" evidence=ISO] [GO:0010719
          "negative regulation of epithelial to mesenchymal transition"
          evidence=IEA;ISO] [GO:0016568 "chromatin modification" evidence=IEA]
          [GO:0019900 "kinase binding" evidence=IPI] [GO:0019904 "protein
          domain specific binding" evidence=IEA;IBA] [GO:0021533 "cell
          differentiation in hindbrain" evidence=IEA;ISO;IBA] [GO:0021779
          "oligodendrocyte cell fate commitment" evidence=IBA] [GO:0021904
          "dorsal/ventral neural tube patterning" evidence=IEA;ISO;IBA]
          [GO:0023019 "signal transduction involved in regulation of gene
          expression" evidence=IEA;ISO] [GO:0030193 "regulation of blood
          coagulation" evidence=IEA;ISO] [GO:0030324 "lung development"
          evidence=ISO] [GO:0031018 "endocrine pancreas development"
          evidence=IEA;ISO;IBA] [GO:0032289 "central nervous system myelin
          formation" evidence=IBA] [GO:0032525 "somite rostral/caudal axis
          specification" evidence=IEA;ISO] [GO:0032868 "response to insulin
          stimulus" evidence=IEP] [GO:0033132 "negative regulation of
          glucokinase activity" evidence=IEA;ISO] [GO:0040019 "positive
          regulation of embryonic development" evidence=IEA;ISO;ISS]
          [GO:0043433 "negative regulation of sequence-specific DNA binding
          transcription factor activity" evidence=IEA;ISO] [GO:0043565
          "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0044212
          "transcription regulatory region DNA binding" evidence=ISO]
          [GO:0044464 "cell part" evidence=ISO] [GO:0045665 "negative
          regulation of neuron differentiation" evidence=IEA;ISO;IBA]
          [GO:0045666 "positive regulation of neuron differentiation"
          evidence=IEA;ISO;IBA] [GO:0045893 "positive regulation of
          transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=ISO;IMP;IDA] [GO:0045945 "positive regulation of
          transcription from RNA polymerase III promoter" evidence=IEA;ISO]
          [GO:0046332 "SMAD binding" evidence=IDA] [GO:0048468 "cell
          development" evidence=IEA;ISO] [GO:0048646 "anatomical structure
          formation involved in morphogenesis" evidence=ISO] [GO:0048665
          "neuron fate specification" evidence=IEA;ISO;IBA] [GO:0051090
          "regulation of sequence-specific DNA binding transcription factor
          activity" evidence=IBA] [GO:0060441 "epithelial tube branching
          involved in lung morphogenesis" evidence=IEA;ISO;IBA] [GO:0060487
          "lung epithelial cell differentiation" evidence=IEA;ISO;IBA]
          [GO:0061178 "regulation of insulin secretion involved in cellular
          response to glucose stimulus" evidence=IEA;ISO] [GO:0071542
          "dopaminergic neuron differentiation" evidence=IEA;ISO] [GO:0090009
          "primitive streak formation" evidence=IEA;ISO;ISS] [GO:2000543
          "positive regulation of gastrulation" evidence=IEA;ISO;ISS]
          [GO:2000971 "negative regulation of detection of glucose"
          evidence=IEA;ISO] [GO:2000976 "regulation of transcription from RNA
          polymerase II promoter involved in detection of glucose"
          evidence=IEA;ISO] InterPro:IPR001766 InterPro:IPR013638
          InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
          PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
          RGD:2808 GO:GO:0005737 GO:GO:0019904 GO:GO:0007596 GO:GO:0071542
          GO:GO:0001701 GO:GO:0008344 GO:GO:0045665 Gene3D:1.10.10.10
          InterPro:IPR011991 GO:GO:0016568 GO:GO:0032868 GO:GO:0005667
          GO:GO:0003705 GO:GO:0000978 GO:GO:0001077 GO:GO:0008301 GO:GO:0003690
          GO:GO:0046332 GO:GO:0045666 GO:GO:0043433 GO:GO:0040019 GO:GO:0008134
          GO:GO:0031018 GO:GO:0045945 GO:GO:0007492 GO:GO:0030193 GO:GO:0060487
          GO:GO:0048665 GO:GO:0051090 GO:GO:0021904 GO:GO:0060441 GO:GO:0010719
          GO:GO:0023019 GO:GO:0090009 GO:GO:0061178 eggNOG:COG5025
          GO:GO:0000433 GO:GO:0032525 GO:GO:0032289 GO:GO:0021533 KO:K08035
          InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
          HOVERGEN:HBG006621 CTD:3170 OrthoDB:EOG4QRH5P GO:GO:0001705
          GO:GO:2000971 GO:GO:0033132 GO:GO:0021779 GO:GO:2000543 GO:GO:0000432
          GO:GO:2000976 EMBL:L09647 IPI:IPI00362515 PIR:B39533
          RefSeq:NP_036875.1 UniGene:Rn.10948 ProteinModelPortal:P32182
          SMR:P32182 IntAct:P32182 STRING:P32182 PhosphoSite:P32182
          GeneID:25099 KEGG:rno:25099 InParanoid:P32182 NextBio:605409
          Genevestigator:P32182 GermOnline:ENSRNOG00000013133 Uniprot:P32182
        Length = 458

 Score = 588 (212.0 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
 Identities = 133/226 (58%), Positives = 152/226 (67%)

Query:     6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
             S N S GS  M+ SY    +  S +  S   G  + G S +  + G + GM GP+   + 
Sbjct:    55 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGA-MAGMSGSAGAAG-VAGM-GPHL--SP 108

Query:    66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYTHAK 123
             S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYTHAK
Sbjct:   109 SLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYTHAK 159

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFND F+K
Sbjct:   160 PPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFND-FLK 218

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             VPR PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK + +  +++
Sbjct:   219 VPRAPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCENELALKE 264

 Score = 63 (27.2 bits), Expect = 6.1e-62, Sum P(2) = 6.1e-62
 Identities = 18/47 (38%), Positives = 25/47 (53%)

Query:   315 QDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLL 361
             Q  + AA +     HP L PP+    HLK E+   A NHPF ++ L+
Sbjct:   341 QQQQAAAHLLGPPHHPGL-PPEA---HLKPEHHY-AFNHPFSINNLM 382


>UNIPROTKB|P32315 [details] [associations]
            symbol:foxa1-b "Forkhead box protein A1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621 KO:K09387
            EMBL:M93658 EMBL:BC047130 PIR:I51580 RefSeq:NP_001080063.1
            UniGene:Xl.52787 ProteinModelPortal:P32315 SMR:P32315 GeneID:379755
            KEGG:xla:379755 CTD:379755 Xenbase:XB-GENE-6256649 Uniprot:P32315
        Length = 427

 Score = 603 (217.3 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 131/231 (56%), Positives = 156/231 (67%)

Query:     8 NTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLG------GFS-SNMHSMGSINGMNG-- 58
             N   G   M    +MN + +  +  SGS   P G      G S S M  MGS   MNG  
Sbjct:    33 NMPQGLATMNTYMTMNPMSSGSNITSGSFNMPYGNSGLGAGLSPSGMSGMGSAGAMNGMG 92

Query:    59 PNCMSTGSMGYSSNMNA---ACMGGINSYN-TALTTGRAELAENSPSPGALQRVARADKT 114
                 S GS    SNMNA   A    +NS + +++ +G + +   + +   + R  R  KT
Sbjct:    93 SGVPSMGSALSPSNMNAIQSAQQASMNSLSYSSMNSGMSPMGYGATN---INRT-RDSKT 148

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             +RRSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRHS
Sbjct:   149 FRRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRHS 208

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             LSFNDCF+KV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K +
Sbjct:   209 LSFNDCFIKVSRSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKTQ 259

 Score = 45 (20.9 bits), Expect = 1.3e-61, Sum P(2) = 1.3e-61
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query:   337 HYNH-HLKQEYGASAVNHPFPVSRLL 361
             H  H HLK +   S  NHPF ++ L+
Sbjct:   337 HETHIHLKGDPHYS-FNHPFSINNLM 361


>ZFIN|ZDB-GENE-980526-423 [details] [associations]
            symbol:foxa3 "forkhead box A3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA;IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0019904 "protein domain specific
            binding" evidence=IEA;IBA] [GO:0048319 "axial mesoderm
            morphogenesis" evidence=IGI;IMP] [GO:0033504 "floor plate
            development" evidence=IMP] [GO:0048785 "hatching gland development"
            evidence=IMP] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0070368 "positive
            regulation of hepatocyte differentiation" evidence=IBA] [GO:0008285
            "negative regulation of cell proliferation" evidence=IBA]
            [GO:0060487 "lung epithelial cell differentiation" evidence=IRD]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048665 "neuron fate
            specification" evidence=IBA] [GO:0009267 "cellular response to
            starvation" evidence=IBA] [GO:0007420 "brain development"
            evidence=IGI] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-980526-423 GO:GO:0019904 GO:GO:0008285
            GO:GO:0007420 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
            GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 GO:GO:0033504
            GeneTree:ENSGT00700000104475 GO:GO:0048319 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 GO:GO:0070368 EMBL:BX908751
            GO:GO:0048785 EMBL:BC162391 IPI:IPI00505867 UniGene:Dr.1307
            SMR:Q1LV18 STRING:Q1LV18 Ensembl:ENSDART00000010813
            InParanoid:Q1LV18 OMA:NLMSNEQ Uniprot:Q1LV18
        Length = 441

 Score = 601 (216.6 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 129/229 (56%), Positives = 156/229 (68%)

Query:     8 NTSLGSPG-MTPSYSMNSVIN---SCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMS 63
             N    SP  M    S+NS IN   +CS  S + G P  G +S+   + S+ G  GPN MS
Sbjct:    23 NEMYSSPSAMNSVSSLNSYINLNSACSTSSMNMGYPSAGLNSS--PLSSMGG--GPNHMS 78

Query:    64 TGSMGYSSN--------MNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTY 115
                +G S N         +A+ +G ++ Y +    G+     + PSP +L R     K Y
Sbjct:    79 LSPVGSSLNPSSLTQLGSSASTLGPLSHYQSM---GQPMSQISYPSPTSLNRTKEMPKPY 135

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             RRS THAKPPYSYISLITMAIQ S +KMLTL+EIYQ+IMDLFP+YR+NQQRWQNSIRHSL
Sbjct:   136 RRSLTHAKPPYSYISLITMAIQQSQSKMLTLNEIYQWIMDLFPYYRENQQRWQNSIRHSL 195

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SFNDCFVKV R+PDKPGKGS+W LH +SGNMFENGCYLRRQKRFK ++K
Sbjct:   196 SFNDCFVKVARSPDKPGKGSYWALHPNSGNMFENGCYLRRQKRFKIEEK 244

 Score = 44 (20.5 bits), Expect = 2.6e-61, Sum P(2) = 2.6e-61
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query:   330 PHLI-PPDHY----NHHLKQEYGASAVNHPFPVSRLL 361
             PHL+  P H+    N  LK        NHPF ++ L+
Sbjct:   346 PHLLGSPMHHLDLQNDPLKSMDPHFNFNHPFSITNLM 382


>MGI|MGI:1347476 [details] [associations]
            symbol:Foxa2 "forkhead box A2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0000432 "positive
            regulation of transcription from RNA polymerase II promoter by
            glucose" evidence=IDA] [GO:0000433 "negative regulation of
            transcription from RNA polymerase II promoter by glucose"
            evidence=IDA] [GO:0000978 "RNA polymerase II core promoter proximal
            region sequence-specific DNA binding" evidence=ISO] [GO:0001077
            "RNA polymerase II core promoter proximal region sequence-specific
            DNA binding transcription factor activity involved in positive
            regulation of transcription" evidence=ISO] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0001705 "ectoderm
            formation" evidence=IGI] [GO:0001708 "cell fate specification"
            evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO;IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=ISO;IBA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0007275 "multicellular
            organismal development" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IGI] [GO:0007492 "endoderm
            development" evidence=IBA] [GO:0007596 "blood coagulation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008344 "adult locomotory behavior" evidence=IMP] [GO:0009653
            "anatomical structure morphogenesis" evidence=IGI] [GO:0009952
            "anterior/posterior pattern specification" evidence=IGI]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
            [GO:0010468 "regulation of gene expression" evidence=IGI]
            [GO:0010719 "negative regulation of epithelial to mesenchymal
            transition" evidence=ISO] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0019900 "kinase binding" evidence=ISO]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021533 "cell differentiation in hindbrain" evidence=IGI;IMP]
            [GO:0021779 "oligodendrocyte cell fate commitment" evidence=IBA]
            [GO:0021904 "dorsal/ventral neural tube patterning"
            evidence=IGI;IDA] [GO:0023019 "signal transduction involved in
            regulation of gene expression" evidence=IDA] [GO:0030193
            "regulation of blood coagulation" evidence=ISO] [GO:0030324 "lung
            development" evidence=IGI] [GO:0031018 "endocrine pancreas
            development" evidence=ISO;IMP] [GO:0032289 "central nervous system
            myelin formation" evidence=IBA] [GO:0032525 "somite rostral/caudal
            axis specification" evidence=IMP] [GO:0033132 "negative regulation
            of glucokinase activity" evidence=IDA] [GO:0040019 "positive
            regulation of embryonic development" evidence=IMP] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0044464 "cell part"
            evidence=IDA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IGI] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IGI;IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO;IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IGI;IDA;IMP] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IMP] [GO:0046332 "SMAD binding" evidence=ISO]
            [GO:0048468 "cell development" evidence=IMP] [GO:0048646
            "anatomical structure formation involved in morphogenesis"
            evidence=IGI] [GO:0048665 "neuron fate specification"
            evidence=IGI;IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IGI] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IGI] [GO:0061178 "regulation of insulin secretion involved
            in cellular response to glucose stimulus" evidence=IDA] [GO:0070741
            "response to interleukin-6" evidence=TAS] [GO:0071542 "dopaminergic
            neuron differentiation" evidence=IMP] [GO:0090009 "primitive streak
            formation" evidence=IMP] [GO:2000543 "positive regulation of
            gastrulation" evidence=IMP] [GO:2000971 "negative regulation of
            detection of glucose" evidence=IDA] [GO:2000976 "regulation of
            transcription from RNA polymerase II promoter involved in detection
            of glucose" evidence=IDA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347476 GO:GO:0005737 GO:GO:0019904 GO:GO:0007596
            GO:GO:0071542 GO:GO:0043565 GO:GO:0001701 GO:GO:0008344
            GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016568
            GO:GO:0032868 GO:GO:0005667 GO:GO:0003705 GO:GO:0000978
            GO:GO:0008301 GO:GO:0003690 GO:GO:0045666 GO:GO:0043433
            GO:GO:0040019 GO:GO:0008134 GO:GO:0031018 GO:GO:0070741
            GO:GO:0045945 GO:GO:0007492 GO:GO:0030193 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0021904 GO:GO:0060441
            GO:GO:0010719 GO:GO:0023019 GO:GO:0090009 GO:GO:0061178
            eggNOG:COG5025 GeneTree:ENSGT00700000104475 GO:GO:0000433
            GO:GO:0032525 GO:GO:0032289 GO:GO:0021533 KO:K08035
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 CTD:3170 OrthoDB:EOG4QRH5P GO:GO:0001705
            GO:GO:2000971 GO:GO:0033132 GO:GO:0021779 GO:GO:2000543
            GO:GO:0000432 GO:GO:2000976 EMBL:X74937 EMBL:L10409 EMBL:AL845297
            EMBL:U04197 IPI:IPI00119671 PIR:B54258 RefSeq:NP_034576.2
            UniGene:Mm.938 ProteinModelPortal:P35583 SMR:P35583 IntAct:P35583
            STRING:P35583 PhosphoSite:P35583 PRIDE:P35583 DNASU:15376
            Ensembl:ENSMUST00000047315 GeneID:15376 KEGG:mmu:15376
            InParanoid:A2AR89 NextBio:288030 Bgee:P35583 CleanEx:MM_FOXA2
            Genevestigator:P35583 GermOnline:ENSMUSG00000037025 Uniprot:P35583
        Length = 459

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 163/370 (44%), Positives = 200/370 (54%)

Query:     8 NTSLGSPGMTPSYSMNSVI---NSCSPQSGSTGTP--LG-GFSSNMHSM----GSINGMN 57
             N  LG  GM    SM++      S +  +GS      +G G S ++  M    G++ GM+
Sbjct:    32 NAGLGMNGMNTYMSMSAAAMGGGSGNMSAGSMNMSSYVGAGMSPSLAGMSPGAGAMAGMS 91

Query:    58 GPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAE-NSPSP----GALQRVARAD 112
             G +  + G  G   +++ + +  +         G A  A  NS SP      L R AR  
Sbjct:    92 G-SAGAAGVAGMGPHLSPS-LSPLGGQAAGAMGGLAPYANMNSMSPMYGQAGLSR-ARDP 148

Query:   113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
             KTYRRSYTHAKPPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIR
Sbjct:   149 KTYRRSYTHAKPPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIR 208

Query:   173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQXXX 232
             HSLSFNDCF+KVPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++   
Sbjct:   209 HSLSFNDCFLKVPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKEAAG 268

Query:   233 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAGGKKSPETKPH-LSELAMLGLTKE 291
                                                  G +SP +      E    GL++ 
Sbjct:   269 AASSGGKKTAPGSQASQAQLGEAAGSASET-----PAGTESPHSSASPCQEHKRGGLSEL 323

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAV 351
                 A  L       S  Q   QQ +  AA +     HP L PP+    HLK E+   A 
Sbjct:   324 KGAPASALSPPEPAPSPGQ---QQQA--AAHLLGPPHHPGL-PPEA---HLKPEHHY-AF 373

Query:   352 NHPFPVSRLL 361
             NHPF ++ L+
Sbjct:   374 NHPFSINNLM 383

 Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
 Identities = 135/226 (59%), Positives = 155/226 (68%)

Query:     6 SHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTG 65
             S N S GS  M+ SY    +  S +  S   G  + G S +  + G + GM GP+   + 
Sbjct:    55 SGNMSAGSMNMS-SYVGAGMSPSLAGMSPGAGA-MAGMSGSAGAAG-VAGM-GPHL--SP 108

Query:    66 SMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPG--ALQRVARADKTYRRSYTHAK 123
             S+       A  MGG+  Y        A +   SP  G   L R AR  KTYRRSYTHAK
Sbjct:   109 SLSPLGGQAAGAMGGLAPY--------ANMNSMSPMYGQAGLSR-ARDPKTYRRSYTHAK 159

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDCF+K
Sbjct:   160 PPYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLK 219

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             VPR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+  +++
Sbjct:   220 VPRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQLALKE 265


>RGD|2807 [details] [associations]
            symbol:Foxa1 "forkhead box A1" species:10116 "Rattus norvegicus"
          [GO:0000122 "negative regulation of transcription from RNA polymerase
          II promoter" evidence=ISO;IGI] [GO:0001077 "RNA polymerase II core
          promoter proximal region sequence-specific DNA binding transcription
          factor activity involved in positive regulation of transcription"
          evidence=IDA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
          "double-stranded DNA binding" evidence=IDA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=IEA;ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006338 "chromatin
          remodeling" evidence=ISO] [GO:0007389 "pattern specification process"
          evidence=IBA] [GO:0008134 "transcription factor binding"
          evidence=IEA;IPI] [GO:0008301 "DNA binding, bending" evidence=IBA]
          [GO:0009790 "embryo development" evidence=IBA] [GO:0010468
          "regulation of gene expression" evidence=ISO] [GO:0010719 "negative
          regulation of epithelial to mesenchymal transition" evidence=ISO]
          [GO:0010817 "regulation of hormone levels" evidence=IBA] [GO:0016568
          "chromatin modification" evidence=IEA] [GO:0019904 "protein domain
          specific binding" evidence=IEA;IDA] [GO:0030324 "lung development"
          evidence=ISO] [GO:0032355 "response to estradiol stimulus"
          evidence=ISO] [GO:0033148 "positive regulation of intracellular
          estrogen receptor signaling pathway" evidence=ISO] [GO:0035239 "tube
          morphogenesis" evidence=ISO] [GO:0042445 "hormone metabolic process"
          evidence=ISO] [GO:0042593 "glucose homeostasis" evidence=ISO;IBA]
          [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO;IDA]
          [GO:0044212 "transcription regulatory region DNA binding"
          evidence=ISO] [GO:0045666 "positive regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045931 "positive regulation
          of mitotic cell cycle" evidence=ISO] [GO:0045944 "positive regulation
          of transcription from RNA polymerase II promoter" evidence=ISO;IDA]
          [GO:0048665 "neuron fate specification" evidence=ISO;IBA] [GO:0051090
          "regulation of sequence-specific DNA binding transcription factor
          activity" evidence=IBA] [GO:0051091 "positive regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=ISO] [GO:0060441 "epithelial tube branching involved in lung
          morphogenesis" evidence=ISO;IBA] [GO:0060487 "lung epithelial cell
          differentiation" evidence=ISO;IBA] [GO:0060528 "secretory columnal
          luminar epithelial cell differentiation involved in prostate
          glandular acinus development" evidence=ISO;IBA] [GO:0060738
          "epithelial-mesenchymal signaling involved in prostate gland
          development" evidence=ISO;IBA] [GO:0060740 "prostate gland epithelium
          morphogenesis" evidence=ISO;IBA] [GO:0060741 "prostate gland stromal
          morphogenesis" evidence=ISO;IBA] [GO:0060743 "epithelial cell
          maturation involved in prostate gland development" evidence=ISO;IBA]
          InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250
          Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2807 GO:GO:0019904 GO:GO:0043565
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0016568
          GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0000122 GO:GO:0008301
          GO:GO:0009790 GO:GO:0003690 GO:GO:0045666 GO:GO:0007389 GO:GO:0060740
          GO:GO:0060487 GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
          GO:GO:0060741 eggNOG:COG5025 GO:GO:0060743 InterPro:IPR018533
          Pfam:PF09354 CTD:3169 HOGENOM:HOG000231817 HOVERGEN:HBG006621
          KO:K09387 GO:GO:0060738 GO:GO:0060528 EMBL:X55955 IPI:IPI00211811
          PIR:A36674 RefSeq:NP_036874.1 UniGene:Rn.10470
          ProteinModelPortal:P23512 SMR:P23512 STRING:P23512 PhosphoSite:P23512
          GeneID:25098 KEGG:rno:25098 UCSC:RGD:2807 NextBio:605405
          Genevestigator:P23512 GermOnline:ENSRNOG00000009284 Uniprot:P23512
        Length = 466

 Score = 598 (215.6 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 127/231 (54%), Positives = 153/231 (66%)

Query:     1 MENMLSHNTSLGSPGMTP-SYSM---NSVINSCSPQSGSTGTPLGGFSSNMHSM--GSIN 54
             M   ++ NT   S  MTP S++M   N  + +        G P GG +  M+SM    + 
Sbjct:    44 MNTYMTMNTMTTSGNMTPASFNMSYANPGLGAGLSPGAVAGMP-GGSAGAMNSMTAAGVT 102

Query:    55 GMNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARAD-K 113
              M     +S G MG      AA M G+  Y  A+    + +A    + G  +     D K
Sbjct:   103 AMGA--ALSPGGMGSMGAQPAASMNGLGPYAAAMNPCMSPMAYAPSNLGRSRAGGGGDAK 160

Query:   114 TYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 173
             T++RSY HAKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLFP+YRQNQQRWQNSIRH
Sbjct:   161 TFKRSYPHAKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFPYYRQNQQRWQNSIRH 220

Query:   174 SLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             SLSFN CFVKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   221 SLSFNACFVKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQ 271

 Score = 43 (20.2 bits), Expect = 6.9e-61, Sum P(2) = 6.9e-61
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query:   330 PHLIPPDHYNHHLKQEYGAS--AVNHPFPVSRLL 361
             P  + P     HLK   GA   + NHPF ++ L+
Sbjct:   370 PTWLAPHESQLHLK---GAPHYSFNHPFSINNLM 400


>UNIPROTKB|Q8AWH1 [details] [associations]
            symbol:foxa1 "Forkhead box protein A1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0045666 "positive regulation of
            neuron differentiation" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0045666
            GO:GO:0008134 GO:GO:0007389 GO:GO:0060487 GO:GO:0048665
            GO:GO:0051090 GO:GO:0010817 GO:GO:0060441 eggNOG:COG5025
            HSSP:Q99958 InterPro:IPR018533 Pfam:PF09354 CTD:3169
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 KO:K09387 OrthoDB:EOG466VMM
            EMBL:AY157637 RefSeq:NP_989419.1 UniGene:Str.1180
            ProteinModelPortal:Q8AWH1 SMR:Q8AWH1 STRING:Q8AWH1 GeneID:395059
            KEGG:xtr:395059 Xenbase:XB-GENE-487352 InParanoid:Q8AWH1
            Uniprot:Q8AWH1
        Length = 428

 Score = 592 (213.5 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
 Identities = 126/224 (56%), Positives = 156/224 (69%)

Query:     3 NMLSHNTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCM 62
             N +S ++++ +     SY+ + +    SP SG +G   G  S+ M+ MGS     G + M
Sbjct:    48 NPMSSSSNMTAGSFNMSYANSGLGAGLSP-SGMSGMGAGSASA-MNGMGS-----GVSSM 100

Query:    63 STGSMGYSSNMNAACMGGINSYN-TALTTGRAELAENSPSPGALQRVARADKTYRRSYTH 121
              T     S N  +A    INS + + +  G + +A     P  + R  R  KT+RRSY H
Sbjct:   101 GTALSPSSMNAMSAQQASINSLSYSGMNPGMSPMAYG---PSNMNRT-RDTKTFRRSYPH 156

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYISLITMAIQ +P+KMLTLSEIYQ+IMDLF +YRQNQQRWQNSIRHSLSFNDCF
Sbjct:   157 AKPPYSYISLITMAIQQAPSKMLTLSEIYQWIMDLFLYYRQNQQRWQNSIRHSLSFNDCF 216

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             VKV R+PDKPGKGS+WTLH DSGNMFENGCYLRRQKRFK +K++
Sbjct:   217 VKVARSPDKPGKGSYWTLHPDSGNMFENGCYLRRQKRFKCEKQQ 260

 Score = 45 (20.9 bits), Expect = 1.8e-60, Sum P(2) = 1.8e-60
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query:   337 HYNH-HLKQEYGASAVNHPFPVSRLL 361
             H  H HLK +   S  NHPF ++ L+
Sbjct:   338 HETHIHLKGDPHYS-FNHPFSINNLM 362


>UNIPROTKB|H9L130 [details] [associations]
            symbol:FOXA2 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0000432 "positive regulation of transcription from RNA
            polymerase II promoter by glucose" evidence=IEA] [GO:0000433
            "negative regulation of transcription from RNA polymerase II
            promoter by glucose" evidence=IEA] [GO:0000978 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding"
            evidence=IEA] [GO:0001701 "in utero embryonic development"
            evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008344 "adult locomotory
            behavior" evidence=IEA] [GO:0010719 "negative regulation of
            epithelial to mesenchymal transition" evidence=IEA] [GO:0021533
            "cell differentiation in hindbrain" evidence=IEA] [GO:0021904
            "dorsal/ventral neural tube patterning" evidence=IEA] [GO:0023019
            "signal transduction involved in regulation of gene expression"
            evidence=IEA] [GO:0030193 "regulation of blood coagulation"
            evidence=IEA] [GO:0031018 "endocrine pancreas development"
            evidence=IEA] [GO:0032525 "somite rostral/caudal axis
            specification" evidence=IEA] [GO:0033132 "negative regulation of
            glucokinase activity" evidence=IEA] [GO:0040019 "positive
            regulation of embryonic development" evidence=IEA] [GO:0043433
            "negative regulation of sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0045665 "negative regulation of
            neuron differentiation" evidence=IEA] [GO:0045666 "positive
            regulation of neuron differentiation" evidence=IEA] [GO:0045945
            "positive regulation of transcription from RNA polymerase III
            promoter" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0048665 "neuron fate specification" evidence=IEA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IEA] [GO:0060487 "lung epithelial cell
            differentiation" evidence=IEA] [GO:0061178 "regulation of insulin
            secretion involved in cellular response to glucose stimulus"
            evidence=IEA] [GO:0071542 "dopaminergic neuron differentiation"
            evidence=IEA] [GO:0090009 "primitive streak formation"
            evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
            evidence=IEA] [GO:2000971 "negative regulation of detection of
            glucose" evidence=IEA] [GO:2000976 "regulation of transcription
            from RNA polymerase II promoter involved in detection of glucose"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104475
            EMBL:AADN02065893 Ensembl:ENSGALT00000029590 OMA:PASASPC
            Uniprot:H9L130
        Length = 264

 Score = 576 (207.8 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 116/160 (72%), Positives = 125/160 (78%)

Query:    67 MGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGA--LQRVARADKTYRRSYTHAKP 124
             MG   + +   MGG      AL      +   SP  G   L R +R  KTYRRSYTHAKP
Sbjct:     4 MGAHLSPSMISMGGQAGSMNALAP-YTNMNSMSPIYGQSNLNR-SRDPKTYRRSYTHAKP 61

Query:   125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
             PYSYISLITMAIQ SP KMLTLSEIYQ+IMDLFPFYRQNQQRWQNSIRHSLSFNDCF+KV
Sbjct:    62 PYSYISLITMAIQQSPNKMLTLSEIYQWIMDLFPFYRQNQQRWQNSIRHSLSFNDCFLKV 121

Query:   185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKK 224
             PR+PDKPGKGSFWTLH DSGNMFENGCYLRRQKRFK +K+
Sbjct:   122 PRSPDKPGKGSFWTLHPDSGNMFENGCYLRRQKRFKCEKQ 161

 Score = 44 (20.5 bits), Expect = 1.1e-58, Sum P(2) = 1.1e-58
 Identities = 12/25 (48%), Positives = 13/25 (52%)

Query:   319 LAAMVASGRCH-PHLIPPDHY--NH 340
             L A   +G  H PHL P  HY  NH
Sbjct:   237 LLAPPHAGLAHEPHLQPEHHYAFNH 261

 Score = 37 (18.1 bits), Expect = 6.1e-58, Sum P(2) = 6.1e-58
 Identities = 7/18 (38%), Positives = 10/18 (55%)

Query:   296 AGLLHSDFQQNSYHQSFH 313
             AGL H    Q  +H +F+
Sbjct:   243 AGLAHEPHLQPEHHYAFN 260


>UNIPROTKB|Q6P839 [details] [associations]
            symbol:foxa4 "Forkhead box protein A4" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010817
            "regulation of hormone levels" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0042593 "glucose
            homeostasis" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IBA] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 InterPro:IPR018533 Pfam:PF09354
            HOGENOM:HOG000231817 HOVERGEN:HBG006621 OrthoDB:EOG43R3NB
            EMBL:CR762190 EMBL:BC061392 RefSeq:NP_988938.1 UniGene:Str.6030
            ProteinModelPortal:Q6P839 SMR:Q6P839 STRING:Q6P839 GeneID:394535
            KEGG:xtr:394535 CTD:394535 Xenbase:XB-GENE-486455 InParanoid:Q6P839
            Bgee:Q6P839 Uniprot:Q6P839
        Length = 399

 Score = 549 (198.3 bits), Expect = 4.9e-53, P = 4.9e-53
 Identities = 113/208 (54%), Positives = 144/208 (69%)

Query:    20 YSMNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACMG 79
             YS    +N+  P +    T +    ++M  M   NG++GP     G++G   +M    +G
Sbjct:    25 YSGIHNMNNGLPSNSFLPTDVSTVPTSMPYMS--NGLSGPVTSIQGNLGSLGSMTQGMVG 82

Query:    80 GIN--SYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQ 137
              +   +   A   G  +  E+       QR  R   TYRR+Y+HAKPPYSYISLITMAIQ
Sbjct:    83 SLAPPASTPAYPMGYCQ-GESE-----FQRDPR---TYRRNYSHAKPPYSYISLITMAIQ 133

Query:   138 NSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFW 197
              +P KM+TL+EIYQ+I+DLFP+YRQNQQRWQNSIRHSLSFNDCFVKVPR+P+KPGKGS+W
Sbjct:   134 QAPNKMMTLNEIYQWIIDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYW 193

Query:   198 TLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             TLH +SGNMFENGCYLRRQKRFK ++ +
Sbjct:   194 TLHPESGNMFENGCYLRRQKRFKCERSK 221


>UNIPROTKB|P33206 [details] [associations]
            symbol:foxa4-b "Forkhead box protein A4-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045892 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 InterPro:IPR018533 Pfam:PF09354 HOVERGEN:HBG006621
            EMBL:S93559 EMBL:U65750 EMBL:BC082641 PIR:A42237
            RefSeq:NP_001081076.1 UniGene:Xl.1082 ProteinModelPortal:P33206
            SMR:P33206 GeneID:394368 KEGG:xla:394368 CTD:394368
            Xenbase:XB-GENE-6254437 Uniprot:P33206
        Length = 400

 Score = 547 (197.6 bits), Expect = 8.0e-53, P = 8.0e-53
 Identities = 113/207 (54%), Positives = 143/207 (69%)

Query:    20 YS-MNSVINSCSPQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACM 78
             YS ++++ N   P +    T +   +S+M  M   NG+ GP     G++G   +M     
Sbjct:    25 YSGIHNMTNGL-PSNSFLPTDVPTVTSSMTYMS--NGLPGPVASIQGNLGSLGSMT---Q 78

Query:    79 GGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQN 138
             G + S     +T    L          QR  R   TYRR+Y+HAKPPYSYISLITMAIQ 
Sbjct:    79 GMVGSLAPPPSTSAYPLGY-CQGESEFQRDPR---TYRRNYSHAKPPYSYISLITMAIQQ 134

Query:   139 SPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWT 198
             +P KM+TL+EIYQ+I+DLFP+YRQNQQRWQNSIRHSLSFNDCF+KVPR+P+KPGKGS+WT
Sbjct:   135 APNKMMTLNEIYQWIVDLFPYYRQNQQRWQNSIRHSLSFNDCFIKVPRSPEKPGKGSYWT 194

Query:   199 LHKDSGNMFENGCYLRRQKRFKDDKKE 225
             LH +SGNMFENGCYLRRQKRFK ++ +
Sbjct:   195 LHPESGNMFENGCYLRRQKRFKCERSK 221


>UNIPROTKB|P33205 [details] [associations]
            symbol:foxa4-a "Forkhead box protein A4-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0001840 "neural plate development" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=IC;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0009948 "anterior/posterior axis specification" evidence=IMP]
            [GO:0030900 "forebrain development" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0030154 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001707 GO:GO:0009948 GO:GO:0001840 InterPro:IPR018533
            Pfam:PF09354 HOVERGEN:HBG006621 EMBL:X65171 EMBL:U65751
            EMBL:BC082358 PIR:S35719 RefSeq:NP_001080963.1 UniGene:Xl.441
            ProteinModelPortal:P33205 SMR:P33205 GeneID:394304 KEGG:xla:394304
            CTD:394304 Xenbase:XB-GENE-865612 Uniprot:P33205
        Length = 399

 Score = 543 (196.2 bits), Expect = 2.1e-52, P = 2.1e-52
 Identities = 113/197 (57%), Positives = 137/197 (69%)

Query:    45 SNMHSMGSINGMNG--PNCMST--GSMGYSSN----MNAACMGGINSYNTALTTGRAELA 96
             S +H+M ++   N   PN +ST   SM Y SN       +  G I S  + +  G     
Sbjct:    26 SGIHNMTNVLPSNSFLPNDVSTVTTSMPYMSNGLPGPVTSIQGNIGSLGS-MPQGMVGSL 84

Query:    97 ENSPSPGAL--------QRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSE 148
                PS  A             R  +TYRR+Y+HAKPPYSYISLITMAIQ +P KM+TL+E
Sbjct:    85 APPPSTAAYPLGYCQGESEFQRDPRTYRRNYSHAKPPYSYISLITMAIQQAPNKMMTLNE 144

Query:   149 IYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFE 208
             IYQ+I+DLFP+YRQNQQRWQNSIRHSLSFNDCFVKVPR+P+KPGKGS+WTLH +SGNMFE
Sbjct:   145 IYQWIIDLFPYYRQNQQRWQNSIRHSLSFNDCFVKVPRSPEKPGKGSYWTLHPESGNMFE 204

Query:   209 NGCYLRRQKRFKDDKKE 225
             NGCYLRRQKRFK ++ +
Sbjct:   205 NGCYLRRQKRFKCERSK 221


>RGD|2809 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10116 "Rattus norvegicus"
          [GO:0001678 "cellular glucose homeostasis" evidence=ISO;IBA;TAS]
          [GO:0003677 "DNA binding" evidence=ISO;IDA;TAS] [GO:0003690
          "double-stranded DNA binding" evidence=IBA] [GO:0003700
          "sequence-specific DNA binding transcription factor activity"
          evidence=ISO;IDA;TAS] [GO:0003705 "RNA polymerase II distal enhancer
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
          "transcription factor complex" evidence=IBA] [GO:0006355 "regulation
          of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0006357
          "regulation of transcription from RNA polymerase II promoter"
          evidence=ISO] [GO:0007283 "spermatogenesis" evidence=ISO] [GO:0007420
          "brain development" evidence=IBA] [GO:0008134 "transcription factor
          binding" evidence=IBA] [GO:0008285 "negative regulation of cell
          proliferation" evidence=IMP] [GO:0008301 "DNA binding, bending"
          evidence=IBA] [GO:0009267 "cellular response to starvation"
          evidence=ISO;IBA] [GO:0009790 "embryo development" evidence=IBA]
          [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
          "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
          plate anterior/posterior regionalization" evidence=IBA] [GO:0031667
          "response to nutrient levels" evidence=IEP] [GO:0043565
          "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
          "transcription regulatory region DNA binding" evidence=ISO]
          [GO:0044428 "nuclear part" evidence=IDA] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=ISO;IDA] [GO:0048665 "neuron fate specification"
          evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
          binding transcription factor activity" evidence=IBA] [GO:0060441
          "epithelial tube branching involved in lung morphogenesis"
          evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
          evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
          differentiation" evidence=IMP] InterPro:IPR001766 InterPro:IPR013638
          InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
          PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
          RGD:2809 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420 GO:GO:0043565
          GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
          GO:GO:0016568 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
          GO:GO:0044212 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0048665
          GO:GO:0051090 GO:GO:0001678 GO:GO:0021999 eggNOG:COG5025
          InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
          HOVERGEN:HBG006621 CTD:3171 KO:K08038 OrthoDB:EOG43R3NB GO:GO:0070368
          EMBL:L09648 IPI:IPI00213519 PIR:S35090 RefSeq:NP_058773.1
          UniGene:Rn.10949 ProteinModelPortal:P32183 SMR:P32183 STRING:P32183
          PRIDE:P32183 GeneID:25100 KEGG:rno:25100 InParanoid:P32183
          NextBio:605413 Genevestigator:P32183 GermOnline:ENSRNOG00000014256
          Uniprot:P32183
        Length = 354

 Score = 532 (192.3 bits), Expect = 3.1e-51, P = 3.1e-51
 Identities = 100/135 (74%), Positives = 111/135 (82%)

Query:    90 TGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEI 149
             TG +     +P PG +     A K YRR  THAKPPYSYISLITMAIQ +P KMLTLSEI
Sbjct:    87 TGGSASGYGAPGPGLVHGKEMA-KGYRRPLTHAKPPYSYISLITMAIQQAPGKMLTLSEI 145

Query:   150 YQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFEN 209
             YQ+IMDLFP+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNMFEN
Sbjct:   146 YQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFEN 205

Query:   210 GCYLRRQKRFKDDKK 224
             GCYLRRQKRFK ++K
Sbjct:   206 GCYLRRQKRFKLEEK 220


>MGI|MGI:1347477 [details] [associations]
            symbol:Foxa3 "forkhead box A3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001678 "cellular glucose
            homeostasis" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISO;IMP] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IMP] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=ISO;IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IMP] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0019904
            "protein domain specific binding" evidence=IBA] [GO:0021999 "neural
            plate anterior/posterior regionalization" evidence=IBA] [GO:0030154
            "cell differentiation" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISO] [GO:0044428 "nuclear part"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=ISO;IBA] Reactome:REACT_13641
            InterPro:IPR001766 InterPro:IPR013638 InterPro:IPR018122
            Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347477
            GO:GO:0005829 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0016568 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            Reactome:REACT_127416 GO:GO:0003690 GO:GO:0009267 GO:GO:0008134
            GO:GO:0031018 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 CTD:3171 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            GO:GO:0070368 EMBL:X74938 IPI:IPI00119677 PIR:C54258
            RefSeq:NP_032286.1 UniGene:Mm.42260 ProteinModelPortal:P35584
            SMR:P35584 STRING:P35584 PhosphoSite:P35584 PRIDE:P35584
            Ensembl:ENSMUST00000036018 GeneID:15377 KEGG:mmu:15377
            UCSC:uc009fkd.1 InParanoid:P35584 NextBio:288034 Bgee:P35584
            CleanEx:MM_FOXA3 Genevestigator:P35584
            GermOnline:ENSMUSG00000040891 Uniprot:P35584
        Length = 353

 Score = 529 (191.3 bits), Expect = 6.5e-51, P = 6.5e-51
 Identities = 101/142 (71%), Positives = 113/142 (79%)

Query:    83 SYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTK 142
             S  T  +TG +     +P PG +     A K YRR   HAKPPYSYISLITMAIQ +P K
Sbjct:    80 SLGTGGSTGGSASGYVAPGPGLVHGKEMA-KGYRRPLAHAKPPYSYISLITMAIQQAPGK 138

Query:   143 MLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKD 202
             MLTLSEIYQ+IMDLFP+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  
Sbjct:   139 MLTLSEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPS 198

Query:   203 SGNMFENGCYLRRQKRFKDDKK 224
             SGNMFENGCYLRRQKRFK ++K
Sbjct:   199 SGNMFENGCYLRRQKRFKLEEK 220


>UNIPROTKB|G3V7T9 [details] [associations]
            symbol:Foxa3 "Forkhead box A3, isoform CRA_b" species:10116
            "Rattus norvegicus" [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:2809 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH473979
            GeneTree:ENSGT00700000104475 InterPro:IPR018533 Pfam:PF09354
            OMA:VYYQGVY UniGene:Rn.10949 Ensembl:ENSRNOT00000019219
            Uniprot:G3V7T9
        Length = 354

 Score = 527 (190.6 bits), Expect = 1.1e-50, P = 1.1e-50
 Identities = 99/135 (73%), Positives = 110/135 (81%)

Query:    90 TGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEI 149
             TG +     +P PG +     A K YRR   HAKPPYSYISLITMAIQ +P KMLTLSEI
Sbjct:    87 TGGSASGYGAPGPGLVHGKEMA-KGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEI 145

Query:   150 YQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFEN 209
             YQ+IMDLFP+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNMFEN
Sbjct:   146 YQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFEN 205

Query:   210 GCYLRRQKRFKDDKK 224
             GCYLRRQKRFK ++K
Sbjct:   206 GCYLRRQKRFKLEEK 220


>UNIPROTKB|Q3Y598 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9913 "Bos taurus" [GO:0070368 "positive regulation of
            hepatocyte differentiation" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IRD] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048665
            "neuron fate specification" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0021999 "neural plate anterior/posterior
            regionalization" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008285 "negative regulation of cell proliferation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001678
            "cellular glucose homeostasis" evidence=IBA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] InterPro:IPR001766
            InterPro:IPR013638 InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0019904 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0007283 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0044212 GO:GO:0003690 GO:GO:0009267
            GO:GO:0008134 GO:GO:0048665 GO:GO:0051090 GO:GO:0001678
            GO:GO:0021999 eggNOG:COG5025 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 EMBL:DQ157763 EMBL:BC116076 IPI:IPI00698928
            RefSeq:NP_001028291.1 UniGene:Bt.49749 ProteinModelPortal:Q3Y598
            SMR:Q3Y598 Ensembl:ENSBTAT00000016056 GeneID:503622 KEGG:bta:503622
            CTD:3171 InParanoid:Q3Y598 KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB
            NextBio:20866246 GO:GO:0070368 Uniprot:Q3Y598
        Length = 351

 Score = 525 (189.9 bits), Expect = 1.7e-50, P = 1.7e-50
 Identities = 100/138 (72%), Positives = 109/138 (78%)

Query:    87 ALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTL 146
             A T G +      P PG L       K YRR   HAKPPYSYISLITMAIQ +P KMLTL
Sbjct:    83 ASTGGGSSSGYGGPGPG-LVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTL 141

Query:   147 SEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNM 206
             SEIYQ+IMDLFP+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNM
Sbjct:   142 SEIYQWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNM 201

Query:   207 FENGCYLRRQKRFKDDKK 224
             FENGCYLRRQKRFK ++K
Sbjct:   202 FENGCYLRRQKRFKLEEK 219


>UNIPROTKB|P55318 [details] [associations]
            symbol:FOXA3 "Hepatocyte nuclear factor 3-gamma"
            species:9606 "Homo sapiens" [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001678 "cellular glucose homeostasis" evidence=IBA;TAS]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008285 "negative regulation of cell
            proliferation" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009267 "cellular response to starvation"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0021999 "neural plate anterior/posterior regionalization"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060441
            "epithelial tube branching involved in lung morphogenesis"
            evidence=IRD] [GO:0060487 "lung epithelial cell differentiation"
            evidence=IRD] [GO:0070368 "positive regulation of hepatocyte
            differentiation" evidence=IBA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA;TAS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=TAS] [GO:0031018 "endocrine pancreas
            development" evidence=TAS] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0019904 Reactome:REACT_111045 GO:GO:0008285 GO:GO:0007420
            GO:GO:0043565 Pathway_Interaction_DB:hnf3apathway GO:GO:0045944
            EMBL:CH471126 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283
            GO:GO:0016568 Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0044212
            GO:GO:0003690 GO:GO:0009267 GO:GO:0008134 GO:GO:0031018
            GO:GO:0048665 GO:GO:0051090 GO:GO:0001678 GO:GO:0021999
            eggNOG:COG5025 InterPro:IPR018533 Pfam:PF09354 HOGENOM:HOG000231817
            HOVERGEN:HBG006621 Pathway_Interaction_DB:hnf3pathway CTD:3171
            KO:K08038 OMA:VYYQGVY OrthoDB:EOG43R3NB GO:GO:0070368 EMBL:L12141
            EMBL:AF176114 EMBL:AF176113 EMBL:BT006720 EMBL:AK223473
            EMBL:EU275778 EMBL:BC016024 IPI:IPI00024388 PIR:C48924
            RefSeq:NP_004488.2 UniGene:Hs.36137 PDB:1VTN PDBsum:1VTN
            ProteinModelPortal:P55318 SMR:P55318 IntAct:P55318 STRING:P55318
            PhosphoSite:P55318 DMDM:8247938 PaxDb:P55318 PRIDE:P55318
            DNASU:3171 Ensembl:ENST00000302177 GeneID:3171 KEGG:hsa:3171
            UCSC:uc002pdr.3 GeneCards:GC19P046368 HGNC:HGNC:5023 HPA:CAB015154
            MIM:602295 neXtProt:NX_P55318 PharmGKB:PA201092 InParanoid:P55318
            PhylomeDB:P55318 GenomeRNAi:3171 NextBio:12574 Bgee:P55318
            CleanEx:HS_FOXA3 Genevestigator:P55318 GermOnline:ENSG00000170608
            Uniprot:P55318
        Length = 350

 Score = 522 (188.8 bits), Expect = 3.6e-50, P = 3.6e-50
 Identities = 98/134 (73%), Positives = 108/134 (80%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
             G +     +P PG L       K YRR   HAKPPYSYISLITMAIQ +P KMLTLSEIY
Sbjct:    86 GSSSSGYGAPGPG-LVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIY 144

Query:   151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENG 210
             Q+IMDLFP+YR+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNMFENG
Sbjct:   145 QWIMDLFPYYRENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENG 204

Query:   211 CYLRRQKRFKDDKK 224
             CYLRRQKRFK ++K
Sbjct:   205 CYLRRQKRFKLEEK 218


>UNIPROTKB|E2RNB4 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0007283 "spermatogenesis" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001678 "cellular
            glucose homeostasis" evidence=IEA] [GO:0019904 "protein domain
            specific binding" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 CTD:3171 KO:K08038 OMA:VYYQGVY
            EMBL:AAEX03000870 RefSeq:XP_541549.3 ProteinModelPortal:E2RNB4
            Ensembl:ENSCAFT00000007001 GeneID:484434 KEGG:cfa:484434
            NextBio:20858576 Uniprot:E2RNB4
        Length = 350

 Score = 514 (186.0 bits), Expect = 2.5e-49, P = 2.5e-49
 Identities = 97/124 (78%), Positives = 105/124 (84%)

Query:   102 PGA-LQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFY 160
             PGA L       K YRR   HAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP+Y
Sbjct:    96 PGAGLVPGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYY 155

Query:   161 RQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             R+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNMFENGCYLRRQKRFK
Sbjct:   156 RENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFK 215

Query:   221 DDKK 224
              ++K
Sbjct:   216 LEEK 219


>UNIPROTKB|F1RM41 [details] [associations]
            symbol:FOXA3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009267 "cellular
            response to starvation" evidence=IEA] [GO:0007283 "spermatogenesis"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001678 "cellular glucose homeostasis"
            evidence=IEA] [GO:0019904 "protein domain specific binding"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR013638
            InterPro:IPR018122 Pfam:PF00250 Pfam:PF08430 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007283 GO:GO:0044212
            GO:GO:0009267 GO:GO:0001678 GeneTree:ENSGT00700000104475
            InterPro:IPR018533 Pfam:PF09354 KO:K08038 OMA:VYYQGVY EMBL:FP102597
            RefSeq:XP_003127277.1 UniGene:Ssc.18674 Ensembl:ENSSSCT00000003431
            GeneID:100512416 KEGG:ssc:100512416 Uniprot:F1RM41
        Length = 350

 Score = 513 (185.6 bits), Expect = 3.2e-49, P = 3.2e-49
 Identities = 96/124 (77%), Positives = 105/124 (84%)

Query:   102 PGA-LQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFY 160
             PG+ L       K YRR   HAKPPYSYISLITMAIQ +P KMLTLSEIYQ+IMDLFP+Y
Sbjct:    96 PGSGLVHGKEMPKGYRRPLAHAKPPYSYISLITMAIQQAPGKMLTLSEIYQWIMDLFPYY 155

Query:   161 RQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             R+NQQRWQNSIRHSLSFNDCFVKV R+PDKPGKGS+W LH  SGNMFENGCYLRRQKRFK
Sbjct:   156 RENQQRWQNSIRHSLSFNDCFVKVARSPDKPGKGSYWALHPSSGNMFENGCYLRRQKRFK 215

Query:   221 DDKK 224
              ++K
Sbjct:   216 LEEK 219


>ZFIN|ZDB-GENE-990415-76 [details] [associations]
            symbol:foxa "forkhead box A sequence" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0019904 "protein domain specific binding" evidence=IBA]
            [GO:0060441 "epithelial tube branching involved in lung
            morphogenesis" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0010817 "regulation of
            hormone levels" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0048665 "neuron fate specification"
            evidence=IBA] [GO:0045666 "positive regulation of neuron
            differentiation" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0042593 "glucose homeostasis" evidence=IBA] [GO:0060487 "lung
            epithelial cell differentiation" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-76 GO:GO:0019904 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0045666 GO:GO:0008134 GO:GO:0007389 GO:GO:0060487
            GO:GO:0048665 GO:GO:0051090 GO:GO:0010817 GO:GO:0060441
            eggNOG:COG5025 HSSP:Q99958 HOGENOM:HOG000231817 CTD:30539
            EMBL:AF052247 IPI:IPI00631514 RefSeq:NP_571357.1 UniGene:Dr.75815
            ProteinModelPortal:O73780 SMR:O73780 STRING:O73780 GeneID:30539
            KEGG:dre:30539 HOVERGEN:HBG108363 NextBio:20806920
            ArrayExpress:O73780 Uniprot:O73780
        Length = 343

 Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
 Identities = 87/109 (79%), Positives = 96/109 (88%)

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             YRR+ +HAKPPYSYISLI MAIQ SP K LTL+EIY +I  LFP+YRQNQQRWQNSIRHS
Sbjct:    81 YRRTLSHAKPPYSYISLICMAIQQSPAKRLTLNEIYDWIRQLFPYYRQNQQRWQNSIRHS 140

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDK 223
             LSFNDCFV+VPR+PD PGKGS+W LH DSGNMFENGCY+RRQKRFK  K
Sbjct:   141 LSFNDCFVRVPRSPDSPGKGSYWALHPDSGNMFENGCYMRRQKRFKCQK 189


>WB|WBGene00004013 [details] [associations]
            symbol:pha-4 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0040010 "positive regulation of
            growth rate" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
            "reproduction" evidence=IMP] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0008340
            "determination of adult lifespan" evidence=IGI;IMP] [GO:0006629
            "lipid metabolic process" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0060465 "pharynx development" evidence=IGI;IMP]
            [GO:0048598 "embryonic morphogenesis" evidence=IMP] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=IMP] [GO:0060573 "cell fate specification
            involved in pattern specification" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IMP] [GO:0045727 "positive regulation of
            translation" evidence=IMP] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IMP]
            [GO:0016239 "positive regulation of macroautophagy" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
            GO:GO:0019904 GO:GO:0002119 GO:GO:0048598 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006629 GO:GO:0040011 GO:GO:0040018
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0040035 GO:GO:0003690 GO:GO:0008134
            GO:GO:0045727 GO:GO:0060465 GO:GO:0051090 GO:GO:0016239
            eggNOG:COG5025 GO:GO:0009888 EMBL:Z92833 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0060573 EMBL:U51163 PIR:T21941
            RefSeq:NP_001041114.1 RefSeq:NP_001041115.1 RefSeq:NP_001041116.1
            ProteinModelPortal:Q17381 SMR:Q17381 DIP:DIP-27474N IntAct:Q17381
            MINT:MINT-1038224 STRING:Q17381 PaxDb:Q17381
            EnsemblMetazoa:F38A6.1a GeneID:180357 KEGG:cel:CELE_F38A6.1
            UCSC:F38A6.1a CTD:180357 WormBase:F38A6.1a WormBase:F38A6.1b
            WormBase:F38A6.1c HOGENOM:HOG000115523 InParanoid:Q17381
            OMA:PSRKKRN NextBio:909012 Uniprot:Q17381
        Length = 506

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 109/236 (46%), Positives = 146/236 (61%)

Query:     8 NTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGG--FS-SNMHSMGSINGMN---GPNC 61
             NT+L         + N ++N  +    +T   LG    S +N    G I+ +    G   
Sbjct:   107 NTTLNYQPYQYQTAANGLLNYNNYSQYATANQLGSNYISPANFMQGGGISPLGFTTGTTG 166

Query:    62 MSTGSMGYSSNMNAACMGGINSYNTA-LTTGRAELAENSPSPG-----ALQRVARADKTY 115
              +T +   +++  +A +G  N  +++ +    A+ + +  S G      +Q      +  
Sbjct:   167 ATTAAASVATSSASAVIGRSNGRSSSTVAASPADRSYSGVSGGQGQELTIQEFETVTEKI 226

Query:   116 RR--SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 173
             RR  +Y  +KPPYSYISLITMAIQ S ++ LTLSEIY +IMDLFP+Y+ NQQRWQNSIRH
Sbjct:   227 RRHGTYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRH 286

Query:   174 SLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             SLSFNDCFVKV R+PDKPGKGSFWTLH+  GNMFENGCYLRRQKRFK  ++E  R+
Sbjct:   287 SLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRK 342


>UNIPROTKB|Q17381 [details] [associations]
            symbol:pha-4 "Defective pharyngeal development protein 4"
            species:6239 "Caenorhabditis elegans" [GO:0006366 "transcription
            from RNA polymerase II promoter" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0008340 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
            GO:GO:0019904 GO:GO:0002119 GO:GO:0048598 GO:GO:0043565
            GO:GO:0045944 GO:GO:0006629 GO:GO:0040011 GO:GO:0040018
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0040035 GO:GO:0003690 GO:GO:0008134
            GO:GO:0045727 GO:GO:0060465 GO:GO:0051090 GO:GO:0016239
            eggNOG:COG5025 GO:GO:0009888 EMBL:Z92833 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0060573 EMBL:U51163 PIR:T21941
            RefSeq:NP_001041114.1 RefSeq:NP_001041115.1 RefSeq:NP_001041116.1
            ProteinModelPortal:Q17381 SMR:Q17381 DIP:DIP-27474N IntAct:Q17381
            MINT:MINT-1038224 STRING:Q17381 PaxDb:Q17381
            EnsemblMetazoa:F38A6.1a GeneID:180357 KEGG:cel:CELE_F38A6.1
            UCSC:F38A6.1a CTD:180357 WormBase:F38A6.1a WormBase:F38A6.1b
            WormBase:F38A6.1c HOGENOM:HOG000115523 InParanoid:Q17381
            OMA:PSRKKRN NextBio:909012 Uniprot:Q17381
        Length = 506

 Score = 485 (175.8 bits), Expect = 3.0e-46, P = 3.0e-46
 Identities = 109/236 (46%), Positives = 146/236 (61%)

Query:     8 NTSLGSPGMTPSYSMNSVINSCSPQSGSTGTPLGG--FS-SNMHSMGSINGMN---GPNC 61
             NT+L         + N ++N  +    +T   LG    S +N    G I+ +    G   
Sbjct:   107 NTTLNYQPYQYQTAANGLLNYNNYSQYATANQLGSNYISPANFMQGGGISPLGFTTGTTG 166

Query:    62 MSTGSMGYSSNMNAACMGGINSYNTA-LTTGRAELAENSPSPG-----ALQRVARADKTY 115
              +T +   +++  +A +G  N  +++ +    A+ + +  S G      +Q      +  
Sbjct:   167 ATTAAASVATSSASAVIGRSNGRSSSTVAASPADRSYSGVSGGQGQELTIQEFETVTEKI 226

Query:   116 RR--SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 173
             RR  +Y  +KPPYSYISLITMAIQ S ++ LTLSEIY +IMDLFP+Y+ NQQRWQNSIRH
Sbjct:   227 RRHGTYGQSKPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRH 286

Query:   174 SLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             SLSFNDCFVKV R+PDKPGKGSFWTLH+  GNMFENGCYLRRQKRFK  ++E  R+
Sbjct:   287 SLSFNDCFVKVARSPDKPGKGSFWTLHEHCGNMFENGCYLRRQKRFKVKEREPSRK 342


>MGI|MGI:1347468 [details] [associations]
            symbol:Foxb2 "forkhead box B2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007420 "brain development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347468 GO:GO:0007420 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000007545
            HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF CTD:442425
            OMA:CHSASQS EMBL:X92591 EMBL:X71942 IPI:IPI00138060 PIR:D47746
            RefSeq:NP_032049.1 UniGene:Mm.7971 ProteinModelPortal:Q64733
            SMR:Q64733 PRIDE:Q64733 Ensembl:ENSMUST00000072915 GeneID:14240
            KEGG:mmu:14240 InParanoid:Q64733 NextBio:285539 Bgee:Q64733
            CleanEx:MM_FOXB2 Genevestigator:Q64733
            GermOnline:ENSMUSG00000056829 Uniprot:Q64733
        Length = 428

 Score = 423 (154.0 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
 Identities = 73/105 (69%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 53 (23.7 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
 Identities = 14/46 (30%), Positives = 19/46 (41%)

Query:   309 HQSFHQQDSELAAMVA-SGRCHPHLIPPDHYNHHLKQEYGASAVNH 353
             H   H   S+ A      G  HPH   P H +HH    + A+  +H
Sbjct:   116 HAHLHSGSSKGAPGTGPGGHLHPH--HPHHAHHHHHHHHHAAHHHH 159


>ZFIN|ZDB-GENE-081104-320 [details] [associations]
            symbol:foxb2 "forkhead box B2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-081104-320 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 KO:K09395 OMA:CHSASQS EMBL:BX571947
            IPI:IPI00634411 RefSeq:XP_688171.1 Ensembl:ENSDART00000054558
            GeneID:559714 KEGG:dre:559714 NextBio:20883097 Uniprot:E7F6A0
        Length = 318

 Score = 428 (155.7 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 74/105 (70%), Positives = 89/105 (84%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+   KML LS+IY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 KNSYSDQKPPYSYISLTAMAIQSCSEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 46 (21.3 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
 Identities = 15/63 (23%), Positives = 24/63 (38%)

Query:   306 NSYHQSFHQQDSELAAMVASGRC---HPHLIPP----DHYNHHLKQEYGASAVNHPFPVS 358
             +SYH   H Q S   +   SG+    HP  +       H+  +        +  HPF + 
Sbjct:   126 HSYHSHHHTQHSLHQSHHHSGKLGVGHPEYLGTMGRLSHFQSYTLSGGQTGSFKHPFAIE 185

Query:   359 RLL 361
              L+
Sbjct:   186 SLI 188


>UNIPROTKB|E2RN41 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:CHSASQS EMBL:AAEX03000542
            EMBL:AAEX03000543 Ensembl:ENSCAFT00000002574 Uniprot:E2RN41
        Length = 434

 Score = 423 (154.0 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 73/105 (69%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 50 (22.7 bits), Expect = 3.2e-43, Sum P(2) = 3.2e-43
 Identities = 9/28 (32%), Positives = 14/28 (50%)

Query:   329 HPHLIPPDHYNHHLKQEYGASAVNHPFP 356
             HPH     H++HH    + A+  +H  P
Sbjct:   140 HPHHPHHPHHHHHHHHHHAAAHHHHHHP 167

 Score = 48 (22.0 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
 Identities = 11/30 (36%), Positives = 15/30 (50%)

Query:   326 GRCHPHLIP--PDHYNHHLKQEYGASAVNH 353
             G  HPH  P  P H +HH    +  +A +H
Sbjct:   134 GHLHPHH-PHHPHHPHHHHHHHHHHAAAHH 162


>UNIPROTKB|F1SIL8 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            KO:K09395 OMA:CHSASQS EMBL:CU571101 RefSeq:XP_001925193.2
            Ensembl:ENSSSCT00000005814 GeneID:100156565 KEGG:ssc:100156565
            Uniprot:F1SIL8
        Length = 430

 Score = 423 (154.0 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
 Identities = 73/105 (69%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 48 (22.0 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query:   326 GRCHPHLIPPDHYNHHLKQEYGASAVNH 353
             G  HPH   P H +HH    + A+A +H
Sbjct:   134 GHLHPH--HPHHPHHH-HHHHHATAHHH 158


>UNIPROTKB|B0JZ54 [details] [associations]
            symbol:foxb1 "Uncharacterized protein" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001756 "somitogenesis"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon
            target recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0061379 "inferior colliculus development"
            evidence=ISS] [GO:0061381 "cell migration in diencephalon"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0008542
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0001756 GO:GO:0007412 GO:GO:0033504
            eggNOG:COG5025 GO:GO:0022029 GeneTree:ENSGT00700000104135 CTD:27023
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF
            GO:GO:0061381 GO:GO:0021855 GO:GO:0061379 GO:GO:0061374
            EMBL:AAMC01074439 EMBL:BC159040 RefSeq:NP_001107970.1
            UniGene:Str.52842 SMR:B0JZ54 Ensembl:ENSXETT00000038420
            GeneID:100125219 KEGG:xtr:100125219 Xenbase:XB-GENE-1018255
            OMA:PHMYSSS Uniprot:B0JZ54
        Length = 322

 Score = 431 (156.8 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
 Identities = 76/110 (69%), Positives = 91/110 (82%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+S  KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK  K +
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFKVMKSD 115

 Score = 39 (18.8 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
 Identities = 11/45 (24%), Positives = 19/45 (42%)

Query:   288 LTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHL 332
             + +E  M  GL  S  Q        H Q + + + + +G   PH+
Sbjct:   173 IAREYKMPGGLAFSTMQPMPAAYPLHNQLTTVGSSIGTG--WPHM 215


>UNIPROTKB|Q5VYV0 [details] [associations]
            symbol:FOXB2 "Forkhead box protein B2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007420 "brain
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0007420 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OrthoDB:EOG40GCRF
            HSSP:Q63245 EMBL:AL353637 IPI:IPI00455929 RefSeq:NP_001013757.1
            UniGene:Hs.553843 ProteinModelPortal:Q5VYV0 SMR:Q5VYV0
            STRING:Q5VYV0 DMDM:74747718 PRIDE:Q5VYV0 Ensembl:ENST00000376708
            GeneID:442425 KEGG:hsa:442425 UCSC:uc004ako.1 CTD:442425
            GeneCards:GC09P079634 HGNC:HGNC:23315 neXtProt:NX_Q5VYV0
            PharmGKB:PA145148830 InParanoid:Q5VYV0 OMA:CHSASQS NextBio:111077
            CleanEx:HS_FOXB2 Genevestigator:Q5VYV0 Uniprot:Q5VYV0
        Length = 432

 Score = 423 (154.0 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 73/105 (69%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 46 (21.3 bits), Expect = 8.5e-43, Sum P(2) = 8.5e-43
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query:   309 HQSFHQQDSELAAMVA-SGRCHPHLIPPDHYNHH 341
             H   H   ++ A      G  HPH     H++HH
Sbjct:   116 HTHLHAGSTKSAPGAGPGGHLHPHHHHHPHHHHH 149


>UNIPROTKB|D4ADN4 [details] [associations]
            symbol:D4ADN4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            OrthoDB:EOG40GCRF IPI:IPI00949813 Ensembl:ENSRNOT00000052350
            Uniprot:D4ADN4
        Length = 363

 Score = 423 (154.0 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
 Identities = 73/105 (69%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRRKRFK 110

 Score = 44 (20.5 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
 Identities = 10/29 (34%), Positives = 13/29 (44%)

Query:   309 HQSFHQQDSELAAMVASGRCHPHLIPPDH 337
             H   H   S+ A     G  HPH++P  H
Sbjct:   116 HAHLHSGSSKGAPGTGPGG-HPHMVPYFH 143


>UNIPROTKB|O93529 [details] [associations]
            symbol:foxb1 "Forkhead box protein B1" species:8355
            "Xenopus laevis" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0007398 "ectoderm development" evidence=IEP] [GO:0007412 "axon
            target recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022008 "neurogenesis" evidence=IEP] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0033504 "floor plate development"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0007398
            GO:GO:0007412 GO:GO:0033504 GO:GO:0022029 CTD:27023
            HOVERGEN:HBG102104 KO:K09395 GO:GO:0061381 GO:GO:0021855
            GO:GO:0061379 GO:GO:0061374 EMBL:AF064810 EMBL:BC124883
            RefSeq:NP_001081836.1 UniGene:Xl.403 HSSP:Q63245
            ProteinModelPortal:O93529 SMR:O93529 PRIDE:O93529 GeneID:398078
            KEGG:xla:398078 Xenbase:XB-GENE-1018260 Uniprot:O93529
        Length = 319

 Score = 428 (155.7 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 76/110 (69%), Positives = 90/110 (81%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ S  KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQGSQEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK  K +
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPRCGDMFENGSFLRRRKRFKVMKSD 115

 Score = 38 (18.4 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 11/45 (24%), Positives = 18/45 (40%)

Query:   288 LTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHL 332
             + +E  M  GL  S  Q        H Q + +   + +G   PH+
Sbjct:   173 IAREYKMPGGLAFSTMQPMPAAYPLHNQLTTVGGSIGTG--WPHM 215


>UNIPROTKB|Q9XZM6 [details] [associations]
            symbol:fkh1 "Winged helix transcription factor Forkhead-1"
            species:7668 "Strongylocentrotus purpuratus" [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0048513 "organ
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 KO:K09395 HSSP:Q63245 EMBL:AF149706
            RefSeq:NP_999797.1 UniGene:Spu.181 ProteinModelPortal:Q9XZM6
            SMR:Q9XZM6 GeneID:373496 KEGG:spu:373496 CTD:373496
            InParanoid:Q9XZM6 Uniprot:Q9XZM6
        Length = 360

 Score = 422 (153.6 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 74/108 (68%), Positives = 91/108 (84%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+ AKPPYSYISL  MAIQ+S  KML LS+IY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RSTYSDAKPPYSYISLTAMAIQSSQEKMLPLSDIYKFIMDRFPYYRKNTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDK 223
             SFNDCF+K+PR PD+PGKGS+W LH  S +MFENG +LRR+KRFK  +
Sbjct:    66 SFNDCFLKIPRRPDRPGKGSYWALHPLSADMFENGSFLRRRKRFKSPR 113

 Score = 44 (20.5 bits), Expect = 1.8e-42, Sum P(2) = 1.8e-42
 Identities = 12/46 (26%), Positives = 20/46 (43%)

Query:   300 HSDFQQNSYHQSFHQQDSELAAMVASGRCHPHLIPPD--HYNHHLK 343
             H+     S+ + F   +S  ++ +  G C  HL P    H+  H K
Sbjct:   278 HASPDSTSFPR-FWAAESVCSSPIPRGTCRVHLAPHSEKHFGTHHK 322


>UNIPROTKB|E1B7H0 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0022029 "telencephalon cell migration" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0033504 "floor plate
            development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=ISS] [GO:0030901
            "midbrain development" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0021794 "thalamus development" evidence=IEA] [GO:0021510
            "spinal cord development" evidence=IEA] [GO:0001655 "urogenital
            system development" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:DAAA02028794 IPI:IPI00686566
            RefSeq:XP_002690896.1 RefSeq:XP_585450.1 Ensembl:ENSBTAT00000025445
            GeneID:539181 KEGG:bta:539181 NextBio:20877831 Uniprot:E1B7H0
        Length = 325

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 76/105 (72%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|E2R277 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 CTD:27023 KO:K09395 OMA:AREYKVP
            EMBL:AAEX03016181 RefSeq:XP_003433969.1 ProteinModelPortal:E2R277
            Ensembl:ENSCAFT00000039029 GeneID:100685913 KEGG:cfa:100685913
            Uniprot:E2R277
        Length = 325

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 76/105 (72%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|Q99853 [details] [associations]
            symbol:FOXB1 "Forkhead box protein B1" species:9606 "Homo
            sapiens" [GO:0001655 "urogenital system development" evidence=IEA]
            [GO:0021510 "spinal cord development" evidence=IEA] [GO:0021794
            "thalamus development" evidence=IEA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0007412
            "axon target recognition" evidence=ISS] [GO:0007595 "lactation"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0043524 "negative regulation of neuron apoptotic process"
            evidence=ISS] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0033504 "floor plate development" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0008542 "visual
            learning" evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061377 "mammary gland lobule
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:AF071554 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0001655 GO:GO:0003690 GO:GO:0008134 GO:GO:0021510
            EMBL:CH471082 GO:GO:0007595 GO:GO:0051090 GO:GO:0007412
            GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025 GO:GO:0022029
            EMBL:AF055080 EMBL:AK290944 EMBL:BC113710 EMBL:U87393
            IPI:IPI00018495 RefSeq:NP_036314.2 UniGene:Hs.734475
            ProteinModelPortal:Q99853 SMR:Q99853 IntAct:Q99853 STRING:Q99853
            PhosphoSite:Q99853 DMDM:215274160 PRIDE:Q99853
            Ensembl:ENST00000396057 GeneID:27023 KEGG:hsa:27023 UCSC:uc002agj.1
            CTD:27023 GeneCards:GC15P060296 HGNC:HGNC:3799 neXtProt:NX_Q99853
            PharmGKB:PA28216 HOGENOM:HOG000007545 HOVERGEN:HBG102104
            InParanoid:Q99853 KO:K09395 OMA:AREYKVP OrthoDB:EOG40GCRF
            PhylomeDB:Q99853 GenomeRNAi:27023 NextBio:49554 Bgee:Q99853
            CleanEx:HS_FOXB1 Genevestigator:Q99853 GermOnline:ENSG00000171956
            GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 Uniprot:Q99853
        Length = 325

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 76/105 (72%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|D2HLR1 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9646
            "Ailuropoda melanoleuca" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0007595 "lactation" evidence=ISS]
            [GO:0008542 "visual learning" evidence=ISS] [GO:0021767 "mammillary
            body development" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=ISS] [GO:0061374
            "mammillothalamic axonal tract development" evidence=ISS]
            [GO:0061377 "mammary gland lobule development" evidence=ISS]
            [GO:0061379 "inferior colliculus development" evidence=ISS]
            [GO:0061381 "cell migration in diencephalon" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001655 GO:GO:0021510 GO:GO:0007595
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 GO:GO:0022029
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000007545 KO:K09395
            OMA:AREYKVP GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 EMBL:ACTA01179549 EMBL:GL193015 RefSeq:XP_002923327.1
            ProteinModelPortal:D2HLR1 Ensembl:ENSAMET00000021309
            GeneID:100475733 KEGG:aml:100475733 Uniprot:D2HLR1
        Length = 325

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 76/105 (72%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>MGI|MGI:1927549 [details] [associations]
            symbol:Foxb1 "forkhead box B1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001756 "somitogenesis"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007412 "axon target recognition" evidence=IMP] [GO:0007595
            "lactation" evidence=IMP] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008542 "visual learning" evidence=IMP]
            [GO:0021767 "mammillary body development" evidence=IMP] [GO:0021855
            "hypothalamus cell migration" evidence=IMP] [GO:0022029
            "telencephalon cell migration" evidence=IMP] [GO:0030901 "midbrain
            development" evidence=IMP] [GO:0033504 "floor plate development"
            evidence=IMP] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0061030
            "epithelial cell differentiation involved in mammary gland alveolus
            development" evidence=IMP] [GO:0061374 "mammillothalamic axonal
            tract development" evidence=IMP] [GO:0061377 "mammary gland lobule
            development" evidence=IMP] [GO:0061379 "inferior colliculus
            development" evidence=IMP] [GO:0061381 "cell migration in
            diencephalon" evidence=IMP] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 EMBL:U90538 MGI:MGI:1927549
            GO:GO:0043565 GO:GO:0008542 GO:GO:0043524 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0001756 GO:GO:0001655 GO:GO:0003690
            GO:GO:0008134 GO:GO:0021510 GO:GO:0007595 GO:GO:0051090
            GO:GO:0007412 GO:GO:0033504 GO:GO:0021794 eggNOG:COG5025
            GO:GO:0022029 GeneTree:ENSGT00700000104135 CTD:27023
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0061030 GO:GO:0021855
            GO:GO:0061379 GO:GO:0061374 EMBL:X92592 EMBL:BC111908 EMBL:U04198
            EMBL:X71943 IPI:IPI00138059 PIR:E47746 RefSeq:NP_071773.2
            UniGene:Mm.440890 ProteinModelPortal:Q64732 SMR:Q64732
            PhosphoSite:Q64732 PRIDE:Q64732 Ensembl:ENSMUST00000071281
            GeneID:64290 KEGG:mmu:64290 UCSC:uc012gwj.1 InParanoid:Q2M2M4
            NextBio:319993 Bgee:Q64732 CleanEx:MM_FOXB1 Genevestigator:Q64732
            GermOnline:ENSMUSG00000059246 Uniprot:Q64732
        Length = 325

 Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
 Identities = 76/105 (72%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+SP KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSSPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|F1NK00 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0001077 "RNA
            polymerase II core promoter proximal region sequence-specific DNA
            binding transcription factor activity involved in positive
            regulation of transcription" evidence=IEA] [GO:0001503
            "ossification" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001656 "metanephros development"
            evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
            [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001946
            "lymphangiogenesis" evidence=IEA] [GO:0001974 "blood vessel
            remodeling" evidence=IEA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0007219 "Notch signaling pathway" evidence=IEA] [GO:0008286
            "insulin receptor signaling pathway" evidence=IEA] [GO:0014032
            "neural crest cell development" evidence=IEA] [GO:0030199 "collagen
            fibril organization" evidence=IEA] [GO:0031490 "chromatin DNA
            binding" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0035050 "embryonic
            heart tube development" evidence=IEA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IEA] [GO:0043010
            "camera-type eye development" evidence=IEA] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0046620 "regulation of organ growth" evidence=IEA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0050880 "regulation of blood vessel size"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IEA] [GO:0072011 "glomerular endothelium
            development" evidence=IEA] [GO:0072112 "glomerular visceral
            epithelial cell differentiation" evidence=IEA] [GO:0072144
            "glomerular mesangial cell development" evidence=IEA] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0008286
            GO:GO:0008283 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0044212 GO:GO:0033630 GO:GO:0031490
            GO:GO:0046620 GO:GO:0048010 GeneTree:ENSGT00690000101636
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:AADN02042527
            EMBL:AADN02064686 EMBL:AADN02064687 IPI:IPI00592388
            Ensembl:ENSGALT00000037132 ArrayExpress:F1NK00 Uniprot:F1NK00
        Length = 467

 Score = 416 (151.5 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 88/156 (56%), Positives = 107/156 (68%)

Query:    82 NSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTH--------AKPPYSYISLIT 133
             N Y TA T G      +  S  A Q  A   ++Y   + H         KPPYSYI+LIT
Sbjct:    24 NYYRTAGTYGGMGNPMSVYSGHAEQYAAGMGRSYGPYHPHQPAAPKDLVKPPYSYIALIT 83

Query:   134 MAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGK 193
             MAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFVKVPR   KPGK
Sbjct:    84 MAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFVKVPRDDKKPGK 143

Query:   194 GSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             GS+WTL  DS NMFENG +LRR++RFK  KK+V ++
Sbjct:   144 GSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVSKE 177

 Score = 38 (18.4 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
 Identities = 7/25 (28%), Positives = 12/25 (48%)

Query:   267 DAGGKKSPETKPHLSELAMLGLTKE 291
             D   +K P  K H    ++ G+ +E
Sbjct:   173 DVSKEKEPREKTHKKNSSVAGVKRE 197


>UNIPROTKB|C1K2Y2 [details] [associations]
            symbol:Ola.4950 "Forkhead box B1.2" species:8090 "Oryzias
            latipes" [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0007412 "axon target recognition"
            evidence=ISS] [GO:0008542 "visual learning" evidence=ISS]
            [GO:0021767 "mammillary body development" evidence=ISS] [GO:0021855
            "hypothalamus cell migration" evidence=ISS] [GO:0022029
            "telencephalon cell migration" evidence=ISS] [GO:0030901 "midbrain
            development" evidence=ISS] [GO:0033504 "floor plate development"
            evidence=ISS] [GO:0043524 "negative regulation of neuron apoptotic
            process" evidence=ISS] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0061374 "mammillothalamic axonal tract
            development" evidence=ISS] [GO:0061379 "inferior colliculus
            development" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0007412
            GO:GO:0033504 eggNOG:COG5025 GO:GO:0022029
            GeneTree:ENSGT00700000104135 OMA:AREYKVP OrthoDB:EOG40GCRF
            GO:GO:0061381 GO:GO:0021855 GO:GO:0061379 GO:GO:0061374
            EMBL:FJ792650 RefSeq:NP_001153921.1 UniGene:Ola.4950
            Ensembl:ENSORLT00000009495 GeneID:100301603 Uniprot:C1K2Y2
        Length = 313

 Score = 434 (157.8 bits), Expect = 7.5e-41, P = 7.5e-41
 Identities = 75/105 (71%), Positives = 90/105 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+ P KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH + G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKRFK 110


>ZFIN|ZDB-GENE-990616-47 [details] [associations]
            symbol:foxb1.2 "forkhead box B1.2" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0033504 "floor
            plate development" evidence=ISS] [GO:0061374 "mammillothalamic
            axonal tract development" evidence=ISS] [GO:0061379 "inferior
            colliculus development" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0007412 "axon target recognition" evidence=ISS]
            [GO:0001756 "somitogenesis" evidence=ISS] [GO:0005634 "nucleus"
            evidence=IEA;ISS] [GO:0043524 "negative regulation of neuron
            apoptotic process" evidence=ISS] [GO:0061381 "cell migration in
            diencephalon" evidence=ISS] [GO:0021855 "hypothalamus cell
            migration" evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990616-47 GO:GO:0043565 GO:GO:0008542 GO:GO:0043524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0003690 GO:GO:0008134
            GO:GO:0051090 GO:GO:0007412 GO:GO:0033504 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0022029 GeneTree:ENSGT00700000104135
            HOGENOM:HOG000007545 HOVERGEN:HBG102104 KO:K09395 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HSSP:Q63245 EMBL:CU462819 EMBL:CU929228 EMBL:AF052246
            EMBL:BC056754 EMBL:BC066395 IPI:IPI00513060 RefSeq:NP_571360.1
            RefSeq:XP_003201510.1 RefSeq:XP_003201511.1 UniGene:Dr.75814
            SMR:O73779 STRING:O73779 Ensembl:ENSDART00000125036
            Ensembl:ENSDART00000128240 GeneID:100535158 GeneID:30542
            KEGG:dre:100535158 KEGG:dre:30542 CTD:30542 InParanoid:O73779
            NextBio:20806922 Uniprot:O73779
        Length = 297

 Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
 Identities = 75/105 (71%), Positives = 89/105 (84%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+ P KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|Q4SM19 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:99883
            "Tetraodon nigroviridis" [GO:0001756 "somitogenesis" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007412 "axon target
            recognition" evidence=ISS] [GO:0008542 "visual learning"
            evidence=ISS] [GO:0021767 "mammillary body development"
            evidence=ISS] [GO:0021855 "hypothalamus cell migration"
            evidence=ISS] [GO:0022029 "telencephalon cell migration"
            evidence=ISS] [GO:0030901 "midbrain development" evidence=ISS]
            [GO:0033504 "floor plate development" evidence=ISS] [GO:0043524
            "negative regulation of neuron apoptotic process" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=ISS] [GO:0061379 "inferior colliculus development"
            evidence=ISS] [GO:0061381 "cell migration in diencephalon"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0008542
            GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0001756 GO:GO:0007412 GO:GO:0033504
            GO:GO:0022029 GeneTree:ENSGT00700000104135 OMA:AREYKVP
            OrthoDB:EOG40GCRF GO:GO:0061381 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 HOVERGEN:HBG051642 EMBL:CAAE01014555
            Ensembl:ENSTNIT00000011410 Uniprot:Q4SM19
        Length = 313

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 75/105 (71%), Positives = 89/105 (84%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL  MAIQ+ P KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPGCGDMFENGSFLRRRKRFK 110


>ZFIN|ZDB-GENE-990415-77 [details] [associations]
            symbol:foxb1.1 "forkhead box B1.1" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0006357 "regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009888
            "tissue development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0007420 "brain development" evidence=IEP]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-990415-77 GO:GO:0007420 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0009888 HOGENOM:HOG000007545
            HOVERGEN:HBG102104 HSSP:Q63245 EMBL:AF052248 IPI:IPI00487571
            RefSeq:NP_571358.1 UniGene:Dr.589 ProteinModelPortal:O73781
            SMR:O73781 GeneID:799571 KEGG:dre:799571 CTD:799571
            InParanoid:O73781 NextBio:20933880 ArrayExpress:O73781
            Uniprot:O73781
        Length = 299

 Score = 428 (155.7 bits), Expect = 3.3e-40, P = 3.3e-40
 Identities = 74/105 (70%), Positives = 88/105 (83%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYI L  MAIQ+ P KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYIPLTAMAIQSCPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|Q8JIT6 [details] [associations]
            symbol:foxb2 "Forkhead box protein B2" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HOVERGEN:HBG102104 KO:K09395 HSSP:Q63245 CTD:442425 EMBL:AJ487619
            PIR:F56556 RefSeq:NP_001165547.1 UniGene:Xl.85731
            ProteinModelPortal:Q8JIT6 SMR:Q8JIT6 GeneID:100337555
            KEGG:xla:100337555 Xenbase:XB-GENE-1021720 Uniprot:Q8JIT6
        Length = 317

 Score = 427 (155.4 bits), Expect = 4.2e-40, P = 4.2e-40
 Identities = 74/105 (70%), Positives = 89/105 (84%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ S  KML LS+IY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 KSSYSEQKPPYSYISLTAMAIQGSQEKMLPLSDIYKFIMDRFPYYRENTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH + G+MFENG +LRR+KRFK
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPNCGDMFENGSFLRRRKRFK 110


>UNIPROTKB|Q4H3J3 [details] [associations]
            symbol:Ci-FoxC "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009653
            "anatomical structure morphogenesis" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048513
            "organ development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0008134
            GO:GO:0009653 GO:GO:0007389 GO:GO:0031490 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0048513 eggNOG:COG5025 KO:K09396
            GO:GO:0009888 EMBL:AB210429 RefSeq:NP_001071708.1 UniGene:Cin.33243
            ProteinModelPortal:Q4H3J3 SMR:Q4H3J3 GeneID:778609 KEGG:cin:778609
            CTD:373528 HOGENOM:HOG000169861 InParanoid:Q4H3J3 Uniprot:Q4H3J3
        Length = 511

 Score = 393 (143.4 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
 Identities = 70/106 (66%), Positives = 87/106 (82%)

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
             ++ S    KPPYSYI+LI MAIQN+P K +TL+ IYQ+IM+ FPFYR+N+Q WQNSIRH+
Sbjct:    91 HQNSKDMVKPPYSYIALIAMAIQNAPDKKVTLNGIYQWIMERFPFYRENKQGWQNSIRHN 150

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             LS N+CFVK+PR   KPGKGS+WT+  D+ NMFENG YLRR+KRFK
Sbjct:   151 LSLNECFVKIPRDDKKPGKGSYWTMDPDAYNMFENGSYLRRRKRFK 196

 Score = 49 (22.3 bits), Expect = 5.8e-40, Sum P(2) = 5.8e-40
 Identities = 19/70 (27%), Positives = 33/70 (47%)

Query:   273 SPETKPH-LSELAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPH 331
             +P T  H  +E++ML LT+ D+  + ++ +    +   Q  H  D +   M  S   +P+
Sbjct:   294 TPNTGQHDNTEVSMLQLTRPDSSGSSVVSALPNADPTFQPLHT-DEDPTNMRHSYN-YPY 351

Query:   332 LIPPDHYNHH 341
                  HYN H
Sbjct:   352 --NSSHYNTH 359

 Score = 45 (20.9 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query:   308 YHQSFHQQDSELAAMVASGRCHPHLIP------PDHY-----NHHLKQE 345
             Y +  H    + A MVAS    P L+P      PDHY     NH  +Q+
Sbjct:   405 YPEQDHSGHQDNATMVASA---PSLMPQNASTSPDHYPADQHNHSQQQQ 450


>UNIPROTKB|Q6NVT7 [details] [associations]
            symbol:foxc2 "Forkhead box protein C2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001569 "patterning of blood vessels"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007219 "Notch
            signaling pathway" evidence=IBA] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008286 "insulin receptor signaling pathway"
            evidence=ISS;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009725 "response to hormone stimulus" evidence=ISS]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=ISS;IBA] [GO:0035050
            "embryonic heart tube development" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0046620 "regulation of
            organ growth" evidence=IBA] [GO:0048010 "vascular endothelial
            growth factor receptor signaling pathway" evidence=IBA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IBA]
            [GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IBA]
            [GO:0048844 "artery morphogenesis" evidence=IBA] [GO:0050880
            "regulation of blood vessel size" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0055010 "ventricular cardiac muscle
            tissue morphogenesis" evidence=IBA] [GO:0060038 "cardiac muscle
            cell proliferation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            EMBL:CR762327 EMBL:BC067916 RefSeq:NP_998857.1 UniGene:Str.2696
            ProteinModelPortal:Q6NVT7 SMR:Q6NVT7 STRING:Q6NVT7
            Ensembl:ENSXETT00000035768 GeneID:407875 KEGG:xtr:407875
            Xenbase:XB-GENE-481382 InParanoid:Q6NVT7 OMA:ARYSVAD Bgee:Q6NVT7
            Uniprot:Q6NVT7
        Length = 464

 Score = 420 (152.9 bits), Expect = 2.3e-39, P = 2.3e-39
 Identities = 93/176 (52%), Positives = 114/176 (64%)

Query:    59 PNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRS 118
             PN +  G + Y S  N     G  +Y +  T      A    +PG    +AR+   Y   
Sbjct:    11 PNAL--GVVPYLSEQNYYRAAG--TYGSMATPMSVYPAHEQYTPG----MARSYGPYHHH 62

Query:   119 YTHA-----KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRH 173
                A     KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH
Sbjct:    63 QPAAPKDLVKPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRH 122

Query:   174 SLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             +LS N+CFVKVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V R+
Sbjct:   123 NLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVSRE 176


>UNIPROTKB|Q70VZ2 [details] [associations]
            symbol:foxB "FoxB protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            GO:GO:0009888 HOGENOM:HOG000007545 HSSP:Q01167 EMBL:AJ534402
            RefSeq:NP_001027695.1 UniGene:Cin.32671 ProteinModelPortal:Q70VZ2
            SMR:Q70VZ2 GeneID:445716 KEGG:cin:445716 CTD:445716
            HOVERGEN:HBG065788 InParanoid:Q70VZ2 Uniprot:Q70VZ2
        Length = 475

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 75/110 (68%), Positives = 89/110 (80%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R SY   KPPYSYI+L  MAIQ+SP KM++LSEIY++IMD FPFYR N QRWQNS+RH+L
Sbjct:     6 RDSYGDQKPPYSYIALTAMAIQSSPNKMMSLSEIYRYIMDRFPFYRNNTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             SFNDCFVKVPR  D+PGKGS W+LH   G MFENG +LRR+KRFK +  +
Sbjct:    66 SFNDCFVKVPRRGDQPGKGSLWSLHPTCGEMFENGSFLRRRKRFKTNSPQ 115


>MGI|MGI:1347466 [details] [associations]
            symbol:Foxc1 "forkhead box C1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
            [GO:0001541 "ovarian follicle development" evidence=IMP]
            [GO:0001568 "blood vessel development" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0001657 "ureteric bud development" evidence=IMP]
            [GO:0001701 "in utero embryonic development" evidence=IMP]
            [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0001945 "lymph vessel development"
            evidence=IGI] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IGI] [GO:0003007
            "heart morphogenesis" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0005720 "nuclear heterochromatin" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007420 "brain development" evidence=IMP] [GO:0007507 "heart
            development" evidence=IGI;ISO;IMP] [GO:0008134 "transcription
            factor binding" evidence=ISO;IBA] [GO:0008301 "DNA binding,
            bending" evidence=ISO;IBA] [GO:0008354 "germ cell migration"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI] [GO:0014034 "neural crest cell fate commitment"
            evidence=IBA] [GO:0030199 "collagen fibril organization"
            evidence=IMP] [GO:0030203 "glycosaminoglycan metabolic process"
            evidence=IMP] [GO:0031490 "chromatin DNA binding" evidence=IBA]
            [GO:0032808 "lacrimal gland development" evidence=IMP] [GO:0035050
            "embryonic heart tube development" evidence=IGI] [GO:0042475
            "odontogenesis of dentin-containing tooth" evidence=ISO;IBA]
            [GO:0043010 "camera-type eye development" evidence=IMP] [GO:0043066
            "negative regulation of apoptotic process" evidence=IGI]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=ISO;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IDA] [GO:0046620 "regulation of organ growth"
            evidence=IGI] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=IGI] [GO:0048341 "paraxial
            mesoderm formation" evidence=IGI] [GO:0048343 "paraxial mesodermal
            cell fate commitment" evidence=IBA] [GO:0048762 "mesenchymal cell
            differentiation" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347466 GO:GO:0005737 GO:GO:0043066 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0001756 GO:GO:0043010 GO:GO:0044212 GO:GO:0001501
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001541 GO:GO:0001946
            GO:GO:0001570 GO:GO:0042475 GO:GO:0008134 GO:GO:0014032
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354
            GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            EMBL:AF045017 EMBL:AJ223298 EMBL:AK144420 EMBL:BC052011 EMBL:X71939
            EMBL:L10406 IPI:IPI00122483 PIR:I49674 RefSeq:NP_032618.2
            UniGene:Mm.12949 ProteinModelPortal:Q61572 SMR:Q61572 IntAct:Q61572
            STRING:Q61572 PhosphoSite:Q61572 PRIDE:Q61572
            Ensembl:ENSMUST00000062292 GeneID:17300 KEGG:mmu:17300
            HOGENOM:HOG000007939 InParanoid:Q9QWR9 NextBio:291834 Bgee:Q61572
            CleanEx:MM_FOXC1 Genevestigator:Q61572
            GermOnline:ENSMUSG00000050295 Uniprot:Q61572
        Length = 553

 Score = 418 (152.2 bits), Expect = 3.7e-39, P = 3.7e-39
 Identities = 85/164 (51%), Positives = 106/164 (64%)

Query:    65 GSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKP 124
             G   Y     AA  GG  +    ++   +  A     PG++ R         +     KP
Sbjct:    21 GEQSYYRAAAAAAGGGYTAMPAPMSV-YSHPAHAEQYPGSMARAYGPYTPQPQPKDMVKP 79

Query:   125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
             PYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR N+Q WQNSIRH+LS N+CFVKV
Sbjct:    80 PYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKV 139

Query:   185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             PR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+ ++
Sbjct:   140 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDAVK 181


>UNIPROTKB|Q12948 [details] [associations]
            symbol:FOXC1 "Forkhead box protein C1" species:9606 "Homo
            sapiens" [GO:0001501 "skeletal system development" evidence=IEA]
            [GO:0001701 "in utero embryonic development" evidence=IEA]
            [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0042475 "odontogenesis of dentin-containing
            tooth" evidence=IMP] [GO:0001503 "ossification" evidence=IBA]
            [GO:0001541 "ovarian follicle development" evidence=IBA]
            [GO:0001570 "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IBA] [GO:0001657 "ureteric bud development"
            evidence=IBA] [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001946
            "lymphangiogenesis" evidence=IBA] [GO:0001974 "blood vessel
            remodeling" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0008354 "germ
            cell migration" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IBA] [GO:0030203 "glycosaminoglycan
            metabolic process" evidence=IBA] [GO:0031490 "chromatin DNA
            binding" evidence=IBA] [GO:0032808 "lacrimal gland development"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IDA;IBA] [GO:0046620
            "regulation of organ growth" evidence=IBA] [GO:0048010 "vascular
            endothelial growth factor receptor signaling pathway" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA] [GO:0045930 "negative regulation of mitotic
            cell cycle" evidence=IDA] [GO:0005634 "nucleus" evidence=IC;IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0008134 "transcription factor binding"
            evidence=IPI] [GO:0008301 "DNA binding, bending" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005720 "nuclear
            heterochromatin" evidence=IDA] [GO:0001654 "eye development"
            evidence=IDA] [GO:0007507 "heart development" evidence=IDA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005737 GO:GO:0007420
            GO:GO:0043565 GO:GO:0001701 GO:GO:0005720 GO:GO:0030199
            GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0044212 GO:GO:0001501 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001541 GO:GO:0001946 GO:GO:0001570
            GO:GO:0042475 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0048010 GO:GO:0045930
            GO:GO:0060038 GO:GO:0055010 GO:GO:0030203 MIM:604229 Orphanet:708
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 GO:GO:0008354 GO:GO:0032808
            EMBL:AF048693 EMBL:AF078096 EMBL:AY228704 EMBL:AL034344 EMBL:L12143
            EMBL:U13221 IPI:IPI00290377 PIR:S51626 RefSeq:NP_001444.2
            UniGene:Hs.348883 ProteinModelPortal:Q12948 SMR:Q12948
            IntAct:Q12948 STRING:Q12948 PhosphoSite:Q12948 DMDM:13638267
            PaxDb:Q12948 PRIDE:Q12948 Ensembl:ENST00000380874 GeneID:2296
            KEGG:hsa:2296 UCSC:uc003mtp.3 CTD:2296 GeneCards:GC06P001610
            H-InvDB:HIX0032962 HGNC:HGNC:3800 HPA:HPA040670 MIM:601090
            MIM:601631 MIM:602482 neXtProt:NX_Q12948 Orphanet:98978
            Orphanet:782 Orphanet:91483 PharmGKB:PA28217 HOVERGEN:HBG051640
            InParanoid:Q12948 OMA:QRIGLNN OrthoDB:EOG479F8T PhylomeDB:Q12948
            GenomeRNAi:2296 NextBio:9319 ArrayExpress:Q12948 Bgee:Q12948
            CleanEx:HS_FOXC1 Genevestigator:Q12948 GermOnline:ENSG00000054598
            GO:GO:0014034 GO:GO:0048343 Uniprot:Q12948
        Length = 553

 Score = 417 (151.9 bits), Expect = 4.8e-39, P = 4.8e-39
 Identities = 85/164 (51%), Positives = 105/164 (64%)

Query:    65 GSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKP 124
             G   Y     AA  GG  +    ++   +  A     PG + R         +     KP
Sbjct:    21 GEQSYYRAAAAAAGGGYTAMPAPMSV-YSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKP 79

Query:   125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
             PYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR N+Q WQNSIRH+LS N+CFVKV
Sbjct:    80 PYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKV 139

Query:   185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             PR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+ ++
Sbjct:   140 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDAVK 181


>UNIPROTKB|Q99958 [details] [associations]
            symbol:FOXC2 "Forkhead box protein C2" species:9606 "Homo
            sapiens" [GO:0014032 "neural crest cell development" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0072112 "glomerular visceral epithelial cell
            differentiation" evidence=IEA] [GO:0072144 "glomerular mesangial
            cell development" evidence=IEA] [GO:0007507 "heart development"
            evidence=IMP] [GO:0007498 "mesoderm development" evidence=NAS]
            [GO:0001503 "ossification" evidence=IBA] [GO:0001569 "patterning of
            blood vessels" evidence=IBA] [GO:0001570 "vasculogenesis"
            evidence=IBA] [GO:0001656 "metanephros development" evidence=IBA]
            [GO:0001657 "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0014034
            "neural crest cell fate commitment" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS;IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IBA] [GO:0048844 "artery morphogenesis"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            [GO:0001946 "lymphangiogenesis" evidence=IMP] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0008286 "insulin receptor signaling pathway" evidence=IDA]
            [GO:0031490 "chromatin DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0009725 "response
            to hormone stimulus" evidence=IDA] [GO:0001077 "RNA polymerase II
            core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=IDA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0010595 "positive regulation of endothelial cell migration"
            evidence=ISS] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISS] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISS] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISS] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0072011 GO:GO:0048703
            eggNOG:COG5025 KO:K09396 GO:GO:0035050 HOVERGEN:HBG051640
            GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19
            EMBL:Y08223 EMBL:GQ282998 EMBL:BC113437 EMBL:BC113439
            IPI:IPI00019155 RefSeq:NP_005242.1 UniGene:Hs.740701 PDB:1D5V
            PDBsum:1D5V ProteinModelPortal:Q99958 SMR:Q99958 IntAct:Q99958
            STRING:Q99958 PhosphoSite:Q99958 DMDM:3024149 PaxDb:Q99958
            PRIDE:Q99958 DNASU:2303 Ensembl:ENST00000320354 GeneID:2303
            KEGG:hsa:2303 UCSC:uc002fjq.3 CTD:2303 GeneCards:GC16P086600
            HGNC:HGNC:3801 MIM:153200 MIM:153300 MIM:153400 MIM:602402
            neXtProt:NX_Q99958 Orphanet:33001 Orphanet:662 PharmGKB:PA28218
            InParanoid:Q99958 OMA:LNHLPGH PhylomeDB:Q99958
            EvolutionaryTrace:Q99958 GenomeRNAi:2303 NextBio:9351 Bgee:Q99958
            CleanEx:HS_FOXC2 Genevestigator:Q99958 GermOnline:ENSG00000176692
            GO:GO:0090050 GO:GO:0035470 Uniprot:Q99958
        Length = 501

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 76/107 (71%), Positives = 91/107 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    72 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V ++
Sbjct:   132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVSKE 176


>ZFIN|ZDB-GENE-010302-2 [details] [associations]
            symbol:foxc1b "forkhead box C1b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IBA] [GO:0001656 "metanephros development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001503
            "ossification" evidence=IBA] [GO:0031490 "chromatin DNA binding"
            evidence=IBA] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0048343 "paraxial mesodermal cell fate commitment"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=IBA] [GO:0007219 "Notch signaling pathway"
            evidence=IBA] [GO:0035050 "embryonic heart tube development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0046620 "regulation of organ growth"
            evidence=IBA] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0001657 "ureteric
            bud development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IGI] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001944 "vasculature development" evidence=IGI;IMP] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-2 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0060038 GO:GO:0055010 eggNOG:COG5025
            GO:GO:0035050 HSSP:Q99958 GeneTree:ENSGT00690000101636
            HOVERGEN:HBG051640 OMA:QRIGLNN GO:GO:0014034 GO:GO:0048343
            HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 EMBL:AF219950 EMBL:BX510653
            EMBL:BC046028 IPI:IPI00493033 RefSeq:NP_571804.1 UniGene:Dr.83301
            ProteinModelPortal:Q9DE24 SMR:Q9DE24 STRING:Q9DE24
            Ensembl:ENSDART00000077753 GeneID:79375 KEGG:dre:79375 CTD:79375
            InParanoid:Q9DE24 NextBio:20931552 Bgee:Q9DE24 Uniprot:Q9DE24
        Length = 433

 Score = 412 (150.1 bits), Expect = 1.6e-38, P = 1.6e-38
 Identities = 80/134 (59%), Positives = 98/134 (73%)

Query:    96 AENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMD 155
             A +   PG + R        ++     KPPYSYI+LITMAIQNS  K +TL+ IYQFIM+
Sbjct:    47 ATHEQYPGGMARAYGPYAPAQQPKDMVKPPYSYIALITMAIQNSSDKKITLNGIYQFIME 106

Query:   156 LFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRR 215
              FPFYR N+Q WQNSIRH+LS N+CFVKVPR   KPGKGS+WTL  DS NMFENG +LRR
Sbjct:   107 RFPFYRDNKQGWQNSIRHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRR 166

Query:   216 QKRFKDDKKEVIRQ 229
             ++RFK  KK+V+R+
Sbjct:   167 RRRFK--KKDVLRE 178


>UNIPROTKB|F1MVT0 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090050 "positive regulation of cell migration involved
            in sprouting angiogenesis" evidence=IEA] [GO:0072144 "glomerular
            mesangial cell development" evidence=IEA] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=IEA] [GO:0072011
            "glomerular endothelium development" evidence=IEA] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IEA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IEA]
            [GO:0050880 "regulation of blood vessel size" evidence=IEA]
            [GO:0048844 "artery morphogenesis" evidence=IEA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IEA] [GO:0048343
            "paraxial mesodermal cell fate commitment" evidence=IEA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=IEA] [GO:0046620 "regulation of organ growth"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:DAAA02046218 IPI:IPI00691047
            UniGene:Bt.30376 Ensembl:ENSBTAT00000016540 NextBio:20867997
            Uniprot:F1MVT0
        Length = 502

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 76/107 (71%), Positives = 91/107 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    72 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V ++
Sbjct:   132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVPKE 176


>UNIPROTKB|E2QSH3 [details] [associations]
            symbol:FOXC2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090050 "positive regulation of cell
            migration involved in sprouting angiogenesis" evidence=IEA]
            [GO:0072144 "glomerular mesangial cell development" evidence=IEA]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IEA] [GO:0072011 "glomerular endothelium development"
            evidence=IEA] [GO:0060038 "cardiac muscle cell proliferation"
            evidence=IEA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=IEA] [GO:0050880 "regulation of blood
            vessel size" evidence=IEA] [GO:0048844 "artery morphogenesis"
            evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
            evidence=IEA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IEA] [GO:0048010 "vascular endothelial growth
            factor receptor signaling pathway" evidence=IEA] [GO:0046620
            "regulation of organ growth" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043066 "negative regulation of apoptotic process"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0035470 "positive regulation of vascular wound
            healing" evidence=IEA] [GO:0035050 "embryonic heart tube
            development" evidence=IEA] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IEA] [GO:0031490 "chromatin
            DNA binding" evidence=IEA] [GO:0030199 "collagen fibril
            organization" evidence=IEA] [GO:0014032 "neural crest cell
            development" evidence=IEA] [GO:0008286 "insulin receptor signaling
            pathway" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0001974 "blood
            vessel remodeling" evidence=IEA] [GO:0001946 "lymphangiogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001657
            "ureteric bud development" evidence=IEA] [GO:0001656 "metanephros
            development" evidence=IEA] [GO:0001569 "patterning of blood
            vessels" evidence=IEA] [GO:0001503 "ossification" evidence=IEA]
            [GO:0001077 "RNA polymerase II core promoter proximal region
            sequence-specific DNA binding transcription factor activity
            involved in positive regulation of transcription" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0008286 GO:GO:0043565 GO:GO:0030199 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0001756 GO:GO:0043010 GO:GO:0044212
            GO:GO:0001974 GO:GO:0072144 GO:GO:0001946 GO:GO:0001569
            GO:GO:0033630 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0046620 GO:GO:0072112 GO:GO:0048010 GO:GO:0060038
            GO:GO:0055010 GO:GO:0072011 GO:GO:0048703 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 GO:GO:0048343 CTD:2303 OMA:LNHLPGH
            GO:GO:0090050 GO:GO:0035470 EMBL:AAEX03003995 RefSeq:XP_860948.1
            Ensembl:ENSCAFT00000031684 GeneID:489671 KEGG:cfa:489671
            NextBio:20862823 Uniprot:E2QSH3
        Length = 505

 Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
 Identities = 76/107 (71%), Positives = 91/107 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    72 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V ++
Sbjct:   132 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVPKE 176


>UNIPROTKB|F1NK01 [details] [associations]
            symbol:Gga.51501 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02042527 EMBL:AADN02064686
            EMBL:AADN02064687 IPI:IPI00819927 Ensembl:ENSGALT00000037131
            ArrayExpress:F1NK01 Uniprot:F1NK01
        Length = 444

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 76/104 (73%), Positives = 89/104 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    39 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 98

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V
Sbjct:    99 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV 140


>MGI|MGI:1347481 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IGI;IMP] [GO:0001503 "ossification"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0001569 "patterning of blood vessels" evidence=IGI] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IMP] [GO:0001657 "ureteric bud development"
            evidence=IMP] [GO:0001756 "somitogenesis" evidence=IGI] [GO:0001822
            "kidney development" evidence=IMP] [GO:0001945 "lymph vessel
            development" evidence=IGI] [GO:0001946 "lymphangiogenesis"
            evidence=ISO;ISS;IBA] [GO:0001974 "blood vessel remodeling"
            evidence=IGI] [GO:0003007 "heart morphogenesis" evidence=IGI]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO;ISS;IDA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IGI] [GO:0005634 "nucleus" evidence=ISO;IC]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0007219 "Notch signaling pathway" evidence=IGI]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007507 "heart development" evidence=ISO;IGI;IMP] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008283 "cell
            proliferation" evidence=IMP] [GO:0008286 "insulin receptor
            signaling pathway" evidence=ISO;ISS;IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0009725 "response to hormone stimulus"
            evidence=ISO;ISS] [GO:0010595 "positive regulation of endothelial
            cell migration" evidence=IDA] [GO:0014032 "neural crest cell
            development" evidence=IGI] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=IMP] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;ISS;IBA] [GO:0033625 "positive regulation of integrin
            activation" evidence=IC] [GO:0033630 "positive regulation of cell
            adhesion mediated by integrin" evidence=IDA] [GO:0035050 "embryonic
            heart tube development" evidence=IGI] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=IDA] [GO:0043010
            "camera-type eye development" evidence=IMP] [GO:0043066 "negative
            regulation of apoptotic process" evidence=IGI] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;ISS] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS;IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0046620 "regulation of organ growth" evidence=IGI] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IGI] [GO:0048341 "paraxial mesoderm formation"
            evidence=IGI] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IMP] [GO:0048701 "embryonic cranial skeleton
            morphogenesis" evidence=IMP] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IMP] [GO:0048704 "embryonic skeletal system
            morphogenesis" evidence=IMP] [GO:0048844 "artery morphogenesis"
            evidence=IMP] [GO:0050880 "regulation of blood vessel size"
            evidence=IGI] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IGI]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IGI]
            [GO:0072011 "glomerular endothelium development" evidence=IMP]
            [GO:0072112 "glomerular visceral epithelial cell differentiation"
            evidence=IMP] [GO:0072144 "glomerular mesangial cell development"
            evidence=IMP] [GO:0090050 "positive regulation of cell migration
            involved in sprouting angiogenesis" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347481 GO:GO:0008286 GO:GO:0043066 GO:GO:0043565
            GO:GO:0030199 GO:GO:0045944 GO:GO:0007219 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0044212 GO:GO:0001974 GO:GO:0003690 GO:GO:0072144
            GO:GO:0001946 GO:GO:0001569 GO:GO:0033630 GO:GO:0001570
            GO:GO:0008134 GO:GO:0014032 GO:GO:0050880 GO:GO:0001503
            GO:GO:0048844 GO:GO:0031490 GO:GO:0001656 GO:GO:0001657
            GO:GO:0051090 GO:GO:0046620 GO:GO:0072112 GO:GO:0048010
            GO:GO:0060038 GO:GO:0055010 GO:GO:0033625 GO:GO:0072011
            GO:GO:0048703 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640 GO:GO:0014034
            GO:GO:0048343 HOGENOM:HOG000007939 OrthoDB:EOG4MCX19 CTD:2303
            OMA:LNHLPGH GO:GO:0090050 GO:GO:0035470 EMBL:X92499 EMBL:Y08222
            EMBL:X74040 EMBL:AK076319 EMBL:S63607 IPI:IPI00126263 PIR:S34472
            RefSeq:NP_038547.2 UniGene:Mm.14092 ProteinModelPortal:Q61850
            SMR:Q61850 STRING:Q61850 PhosphoSite:Q61850 PRIDE:Q61850
            Ensembl:ENSMUST00000054691 GeneID:14234 KEGG:mmu:14234
            InParanoid:Q61850 NextBio:285515 Bgee:Q61850 CleanEx:MM_FOXC2
            Genevestigator:Q61850 GermOnline:ENSMUSG00000046714 Uniprot:Q61850
        Length = 494

 Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
 Identities = 76/104 (73%), Positives = 89/104 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    71 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 130

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V
Sbjct:   131 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV 172


>RGD|1589718 [details] [associations]
            symbol:Foxc1 "forkhead box C1" species:10116 "Rattus norvegicus"
            [GO:0001501 "skeletal system development" evidence=ISO] [GO:0001503
            "ossification" evidence=ISO] [GO:0001541 "ovarian follicle
            development" evidence=ISO] [GO:0001568 "blood vessel development"
            evidence=ISO] [GO:0001654 "eye development" evidence=ISO]
            [GO:0001657 "ureteric bud development" evidence=ISO] [GO:0001701
            "in utero embryonic development" evidence=ISO] [GO:0001756
            "somitogenesis" evidence=ISO] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0001945 "lymph vessel development" evidence=ISO]
            [GO:0001974 "blood vessel remodeling" evidence=ISO] [GO:0003007
            "heart morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005720 "nuclear heterochromatin" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0007219 "Notch
            signaling pathway" evidence=ISO] [GO:0007420 "brain development"
            evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=ISO]
            [GO:0008301 "DNA binding, bending" evidence=ISO] [GO:0008354 "germ
            cell migration" evidence=ISO] [GO:0014032 "neural crest cell
            development" evidence=ISO] [GO:0030199 "collagen fibril
            organization" evidence=ISO] [GO:0030203 "glycosaminoglycan
            metabolic process" evidence=ISO] [GO:0032808 "lacrimal gland
            development" evidence=ISO] [GO:0035050 "embryonic heart tube
            development" evidence=ISO] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=ISO] [GO:0043010 "camera-type eye
            development" evidence=ISO] [GO:0043066 "negative regulation of
            apoptotic process" evidence=ISO] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045930 "negative
            regulation of mitotic cell cycle" evidence=ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO] [GO:0046620 "regulation of organ growth"
            evidence=ISO] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=ISO] [GO:0048341 "paraxial
            mesoderm formation" evidence=ISO] [GO:0048762 "mesenchymal cell
            differentiation" evidence=ISO] [GO:0048844 "artery morphogenesis"
            evidence=ISO] [GO:0050880 "regulation of blood vessel size"
            evidence=ISO] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=ISO] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            REFSEQ:XM_002725235 Ncbi:XP_002725281
        Length = 788

 Score = 417 (151.9 bits), Expect = 3.2e-38, P = 3.2e-38
 Identities = 85/164 (51%), Positives = 105/164 (64%)

Query:    65 GSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKP 124
             G   Y     AA  GG  +    ++   +  A     PG + R         +     KP
Sbjct:   279 GEQSYYRAAAAAAGGGYTAMPAPMSV-YSHPAHAEQYPGGMARAYGPYTPQPQPKDMVKP 337

Query:   125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
             PYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR N+Q WQNSIRH+LS N+CFVKV
Sbjct:   338 PYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRDNKQGWQNSIRHNLSLNECFVKV 397

Query:   185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             PR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+ ++
Sbjct:   398 PRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDAVK 439


>FB|FBgn0004897 [details] [associations]
            symbol:fd96Ca "forkhead domain 96Ca" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IBA;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0048806 "genitalia development" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0048813 "dendrite morphogenesis" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003705 "RNA polymerase
            II distal enhancer sequence-specific DNA binding transcription
            factor activity" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0048806 GO:GO:0008301
            GO:GO:0009790 GO:GO:0048813 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09411
            GeneTree:ENSGT00700000104135 EMBL:BT029152 EMBL:M96443
            RefSeq:NP_524495.1 UniGene:Dm.27400 ProteinModelPortal:P32028
            SMR:P32028 EnsemblMetazoa:FBtr0084770 GeneID:43010
            KEGG:dme:Dmel_CG11921 CTD:43010 FlyBase:FBgn0004897
            InParanoid:P32028 OMA:DIDVVEC OrthoDB:EOG4CFXR1 PhylomeDB:P32028
            GenomeRNAi:43010 NextBio:831795 Bgee:P32028 GermOnline:CG11921
            Uniprot:P32028
        Length = 372

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 73/110 (66%), Positives = 88/110 (80%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R SY   KPPYSYISL  MAI +SP KML LS+IY+FI D FP+YR+N QRWQNS+RH+L
Sbjct:     6 RESYGEQKPPYSYISLTAMAIWSSPEKMLPLSDIYKFITDRFPYYRKNTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             SFNDCF+KVPR PD+PGKG++W LH  + +MFENG  LRR+KRFK  K +
Sbjct:    66 SFNDCFIKVPRRPDRPGKGAYWALHPQAFDMFENGSLLRRRKRFKLHKND 115


>UNIPROTKB|Q68F77 [details] [associations]
            symbol:foxc1 "Forkhead box protein C1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001503 "ossification"
            evidence=IBA] [GO:0001541 "ovarian follicle development"
            evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IBA] [GO:0001657
            "ureteric bud development" evidence=IBA] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=IBA] [GO:0001974 "blood vessel remodeling" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=ISS] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0007155 "cell adhesion"
            evidence=ISS] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0007420 "brain development" evidence=IBA] [GO:0007498 "mesoderm
            development" evidence=ISS] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008354 "germ cell migration" evidence=IBA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0030203 "glycosaminoglycan metabolic process" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=IBA] [GO:0032808
            "lacrimal gland development" evidence=IBA] [GO:0035050 "embryonic
            heart tube development" evidence=IBA] [GO:0042475 "odontogenesis of
            dentin-containing tooth" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IBA] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048793 "pronephros development"
            evidence=ISS] [GO:0048844 "artery morphogenesis" evidence=IBA]
            [GO:0050880 "regulation of blood vessel size" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0055010
            "ventricular cardiac muscle tissue morphogenesis" evidence=IBA]
            [GO:0060038 "cardiac muscle cell proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007420 GO:GO:0043565 GO:GO:0030199 GO:GO:0045944
            GO:GO:0007155 GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0001756
            GO:GO:0043010 GO:GO:0001974 GO:GO:0003690 GO:GO:0001541
            GO:GO:0001946 GO:GO:0001570 GO:GO:0042475 GO:GO:0008134
            GO:GO:0050880 GO:GO:0001503 GO:GO:0048844 GO:GO:0031490
            GO:GO:0001656 GO:GO:0001657 GO:GO:0051090 GO:GO:0046620
            GO:GO:0048010 GO:GO:0045930 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048793 GO:GO:0030203 eggNOG:COG5025 KO:K09396 GO:GO:0035050
            GO:GO:0008354 GeneTree:ENSGT00690000101636 GO:GO:0032808 CTD:2296
            HOVERGEN:HBG051640 GO:GO:0014034 GO:GO:0048343 HOGENOM:HOG000007939
            EMBL:BC079966 RefSeq:NP_001007864.1 UniGene:Str.6156
            ProteinModelPortal:Q68F77 SMR:Q68F77 Ensembl:ENSXETT00000001313
            GeneID:493250 KEGG:xtr:493250 Xenbase:XB-GENE-479055
            InParanoid:Q68F77 OrthoDB:EOG4MCX19 Bgee:Q68F77 Uniprot:Q68F77
        Length = 495

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 75/106 (70%), Positives = 90/106 (84%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CFV
Sbjct:    79 KPPYSYIALITMAIQNAPEKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V++
Sbjct:   139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDVVK 182


>UNIPROTKB|Q9PVY9 [details] [associations]
            symbol:foxc2-a "Forkhead box protein C2-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=IEP]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 KO:K09396
            HSSP:Q99958 HOVERGEN:HBG051640 EMBL:AJ249224 EMBL:BC111544
            PIR:E56556 RefSeq:NP_001089960.2 UniGene:Xl.20334
            ProteinModelPortal:Q9PVY9 SMR:Q9PVY9 GeneID:735030 KEGG:xla:735030
            CTD:735030 Xenbase:XB-GENE-865122 Uniprot:Q9PVY9
        Length = 465

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 75/107 (70%), Positives = 91/107 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    72 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KVPR   KPGKGS+W+L  DS NMFENG +LRR++RFK  +K+V R+
Sbjct:   132 KVPRDDKKPGKGSYWSLDPDSYNMFENGSFLRRRRRFK--RKDVCRE 176


>ZFIN|ZDB-GENE-010302-1 [details] [associations]
            symbol:foxc1a "forkhead box C1a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043114 "regulation of vascular
            permeability" evidence=IGI] [GO:0061386 "closure of optic fissure"
            evidence=IMP] [GO:0001568 "blood vessel development" evidence=IGI]
            [GO:0043010 "camera-type eye development" evidence=IGI] [GO:0001756
            "somitogenesis" evidence=IMP] [GO:0001944 "vasculature development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0039021 "pronephric glomerulus
            development" evidence=IGI] [GO:0072149 "glomerular visceral
            epithelial cell fate commitment" evidence=IGI] [GO:0030325 "adrenal
            gland development" evidence=IGI] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-010302-1 GO:GO:0005634 GO:GO:0030325 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001756 GO:GO:0001568 KO:K09396 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOVERGEN:HBG051640
            HOGENOM:HOG000007939 EMBL:CU929125 EMBL:AF219949 EMBL:BC053129
            IPI:IPI00510932 RefSeq:NP_571803.1 UniGene:Dr.82483
            ProteinModelPortal:Q9DE25 SMR:Q9DE25 PRIDE:Q9DE25
            Ensembl:ENSDART00000122732 GeneID:100148408 KEGG:dre:100148408
            CTD:100148408 NextBio:20792036 Bgee:Q9DE25 GO:GO:0061386
            GO:GO:0072149 GO:GO:0039021 Uniprot:Q9DE25
        Length = 476

 Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
 Identities = 90/177 (50%), Positives = 114/177 (64%)

Query:    56 MNGPNCMSTGSMGY-SSNMN---AACMGGINSYNTALTTGRAELAENSPSPGALQRVARA 111
             ++ PN  S G + Y SS+ +   AA  GG       +T      A +   P ++ R    
Sbjct:     7 VSSPN--SLGVVPYISSDQSYYRAAAGGGYTGMPAPMTM--YSHAAHDQYPASMARAYGP 62

Query:   112 DKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 171
                  +     KPPYSYI+LITMAIQNSP K +TL+ IYQFIM+ FPFYR N+Q WQNSI
Sbjct:    63 YTPQPQPKDMVKPPYSYIALITMAIQNSPDKKVTLNGIYQFIMERFPFYRDNKQGWQNSI 122

Query:   172 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             RH+LS N+CFVKVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+ ++
Sbjct:   123 RHNLSLNECFVKVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDAMK 177


>FB|FBgn0014143 [details] [associations]
            symbol:croc "crocodile" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0007380
            "specification of segmental identity, head" evidence=NAS;IMP]
            [GO:0003677 "DNA binding" evidence=NAS;IDA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009653 "anatomical structure
            morphogenesis" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0000122
            "negative regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014296 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0051090 GO:GO:0048513 EMBL:S80254
            EMBL:M96440 PIR:S59870 RefSeq:NP_524202.1 UniGene:Dm.5749
            ProteinModelPortal:P32027 SMR:P32027 STRING:P32027 PRIDE:P32027
            EnsemblMetazoa:FBtr0078395 GeneID:40374 KEGG:dme:Dmel_CG5069
            CTD:40374 FlyBase:FBgn0014143 eggNOG:COG5025
            GeneTree:ENSGT00700000104475 InParanoid:P32027 KO:K09396
            OMA:WYTPETP PhylomeDB:P32027 GenomeRNAi:40374 NextBio:818451
            Bgee:P32027 GermOnline:CG5069 GO:GO:0007380 GO:GO:0009888
            Uniprot:P32027
        Length = 508

 Score = 381 (139.2 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 70/107 (65%), Positives = 88/107 (82%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQN+  K +TL+ IYQ+IM+ FP+YR N+Q WQNSIRH+LS N+CFV
Sbjct:    70 KPPYSYIALIAMAIQNAADKKVTLNGIYQYIMERFPYYRDNKQGWQNSIRHNLSLNECFV 129

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KV R   KPGKGS+WTL  DS NMF+NG +LRR++RFK  KK+V+R+
Sbjct:   130 KVARDDKKPGKGSYWTLDPDSYNMFDNGSFLRRRRRFK--KKDVMRE 174

 Score = 44 (20.5 bits), Expect = 3.5e-38, Sum P(2) = 3.5e-38
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query:   312 FHQQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHP 354
             +H  +  LA + +S   H H     H+   L++    + V HP
Sbjct:   280 YHLNEDNLATVASSQMHHVHHAAAAHHAQQLQRH--VAHVAHP 320


>UNIPROTKB|Q9PVY8 [details] [associations]
            symbol:foxc2-b "Forkhead box protein C2-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007498 "mesoderm development" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0007275 GO:GO:0005634 GO:GO:0045893
            GO:GO:0007498 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AJ249225 EMBL:BC170193 EMBL:BC170195
            RefSeq:NP_001083920.1 UniGene:Xl.508 GeneID:399191 KEGG:xla:399191
            CTD:399191 Xenbase:XB-GENE-6254394 Uniprot:Q9PVY8
        Length = 461

 Score = 407 (148.3 bits), Expect = 5.5e-38, P = 5.5e-38
 Identities = 75/107 (70%), Positives = 90/107 (84%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:    72 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 131

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             KVPR   KPGKGS+W+L  DS NMFENG +LRR++RFK  KK+  R+
Sbjct:   132 KVPRDDKKPGKGSYWSLDPDSYNMFENGSFLRRRRRFK--KKDASRE 176


>UNIPROTKB|Q9PTK2 [details] [associations]
            symbol:foxe4 "Forkhead box protein E4" species:8355
            "Xenopus laevis" [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0002088
            HSSP:Q63245 HOVERGEN:HBG051642 KO:K09398 CTD:2301 EMBL:AF186464
            RefSeq:NP_001079202.1 UniGene:Xl.593 ProteinModelPortal:Q9PTK2
            SMR:Q9PTK2 GeneID:373809 KEGG:xla:373809 Xenbase:XB-GENE-865391
            Uniprot:Q9PTK2
        Length = 365

 Score = 375 (137.1 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 66/112 (58%), Positives = 85/112 (75%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             A   +  +R     KPPYSYI+LI MAI NSP + LTL  IY+FIM+ FPFYR+N ++WQ
Sbjct:    34 ASGGRRRKRPVQRGKPPYSYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQ 93

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NSIRH+L+ NDCFVK+PR P  PGKG++WTL   + +MF+NG +LRR+KRFK
Sbjct:    94 NSIRHNLTLNDCFVKIPREPGHPGKGNYWTLDPAAEDMFDNGSFLRRRKRFK 145

 Score = 46 (21.3 bits), Expect = 9.3e-38, Sum P(2) = 9.3e-38
 Identities = 9/22 (40%), Positives = 15/22 (68%)

Query:   330 PHL-IPPDHYNHHLKQEYGASA 350
             PHL +PP  Y+ +  Q YG+++
Sbjct:   295 PHLPVPPASYSPNNSQLYGSTS 316


>UNIPROTKB|Q32NP8 [details] [associations]
            symbol:foxc1-b "Forkhead box protein C1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0007155 "cell
            adhesion" evidence=ISS] [GO:0007498 "mesoderm development"
            evidence=ISS] [GO:0048793 "pronephros development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 KO:K09396
            HOVERGEN:HBG051640 EMBL:BC108535 RefSeq:NP_001089846.1
            UniGene:Xl.76079 ProteinModelPortal:Q32NP8 SMR:Q32NP8 GeneID:734912
            KEGG:xla:734912 CTD:734912 Xenbase:XB-GENE-865236 Uniprot:Q32NP8
        Length = 495

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 75/104 (72%), Positives = 88/104 (84%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CFV
Sbjct:    79 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V
Sbjct:   139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV 180


>UNIPROTKB|Q9PVZ3 [details] [associations]
            symbol:foxc1-a "Forkhead box protein C1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0006351 "transcription,
            DNA-dependent" evidence=IMP] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IMP] [GO:0007155 "cell
            adhesion" evidence=IMP] [GO:0007498 "mesoderm development"
            evidence=IMP] [GO:0048793 "pronephros development" evidence=IEP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0006355 GO:GO:0007498 GO:GO:0003677
            GO:GO:0043565 GO:GO:0007155 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0048793 HSSP:Q99958
            HOVERGEN:HBG051640 EMBL:AF116844 EMBL:AJ242675 EMBL:BC169731
            EMBL:BC169733 EMBL:BC170199 EMBL:BC170201 RefSeq:NP_001080937.1
            RefSeq:NP_001081683.1 UniGene:Xl.180 UniGene:Xl.34915
            ProteinModelPortal:Q9PVZ3 SMR:Q9PVZ3 GeneID:394280 GeneID:397996
            KEGG:xla:394280 KEGG:xla:397996 CTD:394280 Xenbase:XB-GENE-6252135
            Uniprot:Q9PVZ3
        Length = 492

 Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
 Identities = 75/104 (72%), Positives = 88/104 (84%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQN+P K +TL+ IYQFIM+ FPFYR N+Q WQNSIRH+LS N+CFV
Sbjct:    79 KPPYSYIALITMAIQNAPDKKITLNGIYQFIMERFPFYRDNKQGWQNSIRHNLSLNECFV 138

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK  KK+V
Sbjct:   139 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK--KKDV 180


>UNIPROTKB|Q16676 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9606 "Homo
            sapiens" [GO:0001755 "neural crest cell migration" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=ISS;IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=ISS;IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=ISS;IBA] [GO:0008301 "DNA binding, bending"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IC] [GO:0010628
            "positive regulation of gene expression" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0072213 "metanephric capsule development" evidence=ISS]
            [GO:0072267 "metanephric capsule specification" evidence=ISS]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=TAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0030513 GO:GO:0051216 GO:GO:0008134
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            CTD:2297 HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 EMBL:U59831
            EMBL:U59832 EMBL:U13222 IPI:IPI00003449 PIR:G02738 PIR:S51627
            RefSeq:NP_004463.1 UniGene:Hs.519385 ProteinModelPortal:Q16676
            SMR:Q16676 STRING:Q16676 PhosphoSite:Q16676 DMDM:2494490
            PaxDb:Q16676 PeptideAtlas:Q16676 PRIDE:Q16676 DNASU:2297
            GeneID:2297 KEGG:hsa:2297 UCSC:uc003kcp.3 GeneCards:GC05M072743
            HGNC:HGNC:3802 MIM:601091 neXtProt:NX_Q16676 PharmGKB:PA28219
            ChiTaRS:FOXD1 GenomeRNAi:2297 NextBio:9323 CleanEx:HS_FOXD1
            Genevestigator:Q16676 GO:GO:0072267 Uniprot:Q16676
        Length = 465

 Score = 361 (132.1 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   125 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 184

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   185 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 222

 Score = 59 (25.8 bits), Expect = 1.2e-37, Sum P(2) = 1.2e-37
 Identities = 15/44 (34%), Positives = 19/44 (43%)

Query:   320 AAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNH-PFPVSRLLP 362
             AA  A+   HPH  PP    H    E   +A  + P P+   LP
Sbjct:   296 AAAAAAAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALP 339


>UNIPROTKB|E1BCB1 [details] [associations]
            symbol:FOXB2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            OMA:CHSASQS EMBL:DAAA02022952 EMBL:DAAA02022953 IPI:IPI00838754
            Ensembl:ENSBTAT00000046825 Uniprot:E1BCB1
        Length = 275

 Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
 Identities = 69/101 (68%), Positives = 86/101 (85%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY+  KPPYSYISL  MAIQ+S  KML LS+IY+FIM+ FP+YR++ QRWQNS+RH+L
Sbjct:     6 KSSYSDQKPPYSYISLTAMAIQHSAEKMLPLSDIYKFIMERFPYYREHTQRWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQ 216
             SFNDCF+K+PR PD+PGKGSFW LH D G+MFENG +LRR+
Sbjct:    66 SFNDCFIKIPRRPDQPGKGSFWALHPDCGDMFENGSFLRRR 106


>RGD|621703 [details] [associations]
            symbol:Foxc2 "forkhead box C2" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0001077 "RNA polymerase
            II core promoter proximal region sequence-specific DNA binding
            transcription factor activity involved in positive regulation of
            transcription" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=ISO] [GO:0001503 "ossification"
            evidence=ISO;IBA] [GO:0001568 "blood vessel development"
            evidence=ISO] [GO:0001569 "patterning of blood vessels"
            evidence=ISO;IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=ISO;IBA] [GO:0001657
            "ureteric bud development" evidence=ISO;IBA] [GO:0001756
            "somitogenesis" evidence=ISO;IBA] [GO:0001822 "kidney development"
            evidence=ISO] [GO:0001945 "lymph vessel development" evidence=ISO]
            [GO:0001946 "lymphangiogenesis" evidence=ISO;IBA] [GO:0001974
            "blood vessel remodeling" evidence=ISO;IBA] [GO:0003007 "heart
            morphogenesis" evidence=ISO] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IBA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007219 "Notch signaling pathway"
            evidence=ISO;IBA] [GO:0007507 "heart development" evidence=ISO]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008283 "cell proliferation" evidence=ISO] [GO:0008286 "insulin
            receptor signaling pathway" evidence=ISO;IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009725 "response to hormone
            stimulus" evidence=ISO] [GO:0010595 "positive regulation of
            endothelial cell migration" evidence=ISO] [GO:0014032 "neural crest
            cell development" evidence=ISO] [GO:0014034 "neural crest cell fate
            commitment" evidence=IBA] [GO:0030199 "collagen fibril
            organization" evidence=ISO;IBA] [GO:0031490 "chromatin DNA binding"
            evidence=ISO;IBA] [GO:0033630 "positive regulation of cell adhesion
            mediated by integrin" evidence=ISO] [GO:0035050 "embryonic heart
            tube development" evidence=ISO;IBA] [GO:0035470 "positive
            regulation of vascular wound healing" evidence=ISO] [GO:0043010
            "camera-type eye development" evidence=ISO;IBA] [GO:0043066
            "negative regulation of apoptotic process" evidence=ISO]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=ISO] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISO;IBA]
            [GO:0046620 "regulation of organ growth" evidence=ISO;IBA]
            [GO:0048010 "vascular endothelial growth factor receptor signaling
            pathway" evidence=ISO;IBA] [GO:0048341 "paraxial mesoderm
            formation" evidence=ISO] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=ISO;IBA] [GO:0048701 "embryonic cranial
            skeleton morphogenesis" evidence=ISO] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=ISO;IBA] [GO:0048704
            "embryonic skeletal system morphogenesis" evidence=ISO] [GO:0048844
            "artery morphogenesis" evidence=ISO;IBA] [GO:0050880 "regulation of
            blood vessel size" evidence=ISO;IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0055010 "ventricular cardiac muscle tissue
            morphogenesis" evidence=ISO;IBA] [GO:0060038 "cardiac muscle cell
            proliferation" evidence=ISO;IBA] [GO:0072011 "glomerular
            endothelium development" evidence=ISO] [GO:0072112 "glomerular
            visceral epithelial cell differentiation" evidence=ISO] [GO:0072144
            "glomerular mesangial cell development" evidence=ISO] [GO:0090050
            "positive regulation of cell migration involved in sprouting
            angiogenesis" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621703 GO:GO:0008286
            GO:GO:0043565 GO:GO:0030199 GO:GO:0045944 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0001756 GO:GO:0043010 GO:GO:0001974
            GO:GO:0003690 GO:GO:0001946 GO:GO:0001569 GO:GO:0001570
            GO:GO:0008134 GO:GO:0050880 GO:GO:0001503 GO:GO:0048844
            GO:GO:0031490 GO:GO:0001656 GO:GO:0001657 GO:GO:0051090
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            GO:GO:0048703 GO:GO:0035050 GO:GO:0014034 GO:GO:0048343 EMBL:L13193
            IPI:IPI00206921 PIR:I60918 UniGene:Rn.216723
            ProteinModelPortal:Q63246 SMR:Q63246 Genevestigator:Q63246
            Uniprot:Q63246
        Length = 101

 Score = 399 (145.5 bits), Expect = 3.9e-37, P = 3.9e-37
 Identities = 72/98 (73%), Positives = 84/98 (85%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+L TMAIQN+P K +TL+ IYQFIMD FPFYR+N+Q WQNSIRH+LS N+CFV
Sbjct:     3 KPPYSYIALSTMAIQNAPEKKITLNGIYQFIMDRFPFYRENKQGWQNSIRHNLSLNECFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   KPGKGS+WTL  DS NMFENG +LRR++RFK
Sbjct:    63 KVPRDDKKPGKGSYWTLDPDSYNMFENGSFLRRRRRFK 100


>UNIPROTKB|I3LIV8 [details] [associations]
            symbol:FOXB1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0061381 "cell migration in diencephalon" evidence=IEA]
            [GO:0061379 "inferior colliculus development" evidence=IEA]
            [GO:0061374 "mammillothalamic axonal tract development"
            evidence=IEA] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0043524 "negative
            regulation of neuron apoptotic process" evidence=IEA] [GO:0033504
            "floor plate development" evidence=IEA] [GO:0022029 "telencephalon
            cell migration" evidence=IEA] [GO:0021855 "hypothalamus cell
            migration" evidence=IEA] [GO:0021794 "thalamus development"
            evidence=IEA] [GO:0021510 "spinal cord development" evidence=IEA]
            [GO:0008542 "visual learning" evidence=IEA] [GO:0007595 "lactation"
            evidence=IEA] [GO:0007412 "axon target recognition" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0001756 "somitogenesis"
            evidence=IEA] [GO:0001655 "urogenital system development"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0043565
            GO:GO:0008542 GO:GO:0043524 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0001756 GO:GO:0001655
            GO:GO:0021510 GO:GO:0007595 GO:GO:0007412 GO:GO:0033504
            GO:GO:0021794 GO:GO:0022029 GeneTree:ENSGT00700000104135
            OMA:AREYKVP GO:GO:0061381 GO:GO:0061030 GO:GO:0021855 GO:GO:0061379
            GO:GO:0061374 Ensembl:ENSSSCT00000024793 Uniprot:I3LIV8
        Length = 273

 Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
 Identities = 71/105 (67%), Positives = 84/105 (80%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R +Y+  KPPYSYISL        P KML LSEIY+FIMD FP+YR+N QRWQNS+RH+L
Sbjct:     6 RNTYSDQKPPYSYISL-------XPEKMLPLSEIYKFIMDRFPYYRENTQRWQNSLRHNL 58

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+K+PR PD+PGKGSFW LH   G+MFENG +LRR+KRFK
Sbjct:    59 SFNDCFIKIPRRPDQPGKGSFWALHPSCGDMFENGSFLRRRKRFK 103


>UNIPROTKB|P79772 [details] [associations]
            symbol:FOXD3 "Forkhead box protein D3" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0043009 "chordate embryonic development" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISS;IBA] [GO:0001658
            "branching involved in ureteric bud morphogenesis" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0001829 "trophectodermal
            cell differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0044212 "transcription regulatory
            region DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0001755
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0044212 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0043009 GO:GO:0048846 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:U37274 IPI:IPI00582465
            RefSeq:NP_990282.1 UniGene:Gga.468 ProteinModelPortal:P79772
            SMR:P79772 STRING:P79772 GeneID:395794 KEGG:gga:395794 CTD:27022
            InParanoid:P79772 NextBio:20815862 Uniprot:P79772
        Length = 394

 Score = 368 (134.6 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 72/132 (54%), Positives = 92/132 (69%)

Query:    97 ENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDL 156
             E   S G     A A ++  +S +  KPPYSYI+LITMAI  SP K LTLS I +FI + 
Sbjct:    92 EEGASGGGAAAAAAAGQSKPKS-SLVKPPYSYIALITMAILQSPQKKLTLSGICEFISNR 150

Query:   157 FPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQ 216
             FP+YR+    WQNSIRH+LS NDCFVK+PR P  PGKG++WTL   S +MF+NG +LRR+
Sbjct:   151 FPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRR 210

Query:   217 KRFKDDKKEVIR 228
             KRFK  ++E +R
Sbjct:   211 KRFKRHQQEHLR 222

 Score = 40 (19.1 bits), Expect = 2.2e-36, Sum P(2) = 2.2e-36
 Identities = 17/63 (26%), Positives = 25/63 (39%)

Query:   309 HQSFHQQDSELAAMVASGRC-------HPHLIPPDHYNHHLKQEYGASAVNHPF--PVSR 359
             HQ  H +D     M   G          P+ +PP  Y H        +A+ +P+  PV  
Sbjct:   216 HQQEHLRDQTALMMQGFGAYGLAGPYGRPYGLPPGAYPH-------PAALQYPYIPPVGP 268

Query:   360 LLP 362
             +LP
Sbjct:   269 MLP 271


>WB|WBGene00003017 [details] [associations]
            symbol:lin-31 species:6239 "Caenorhabditis elegans"
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0040027 "negative regulation of
            vulval development" evidence=IMP] [GO:0040018 "positive regulation
            of multicellular organism growth" evidence=IMP] [GO:0040035
            "hermaphrodite genitalia development" evidence=IMP] [GO:0040011
            "locomotion" evidence=IMP] [GO:0040015 "negative regulation of
            multicellular organism growth" evidence=IMP] [GO:0040025 "vulval
            development" evidence=IGI;IMP] [GO:0005634 "nucleus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 GO:GO:0040011 GO:GO:0040018 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0040035 GO:GO:0003690 GO:GO:0040015
            GO:GO:0008134 GO:GO:0007389 GO:GO:0040025 GO:GO:0040027
            GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 EMBL:L11148 EMBL:FO081624 PIR:A47368
            RefSeq:NP_494704.1 ProteinModelPortal:P34683 SMR:P34683
            IntAct:P34683 MINT:MINT-116445 STRING:P34683 EnsemblMetazoa:K10G6.1
            GeneID:173740 KEGG:cel:CELE_K10G6.1 UCSC:K10G6.1 CTD:173740
            WormBase:K10G6.1 InParanoid:P34683 OMA:GMFENGS NextBio:880883
            Uniprot:P34683
        Length = 237

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 68/103 (66%), Positives = 84/103 (81%)

Query:   118 SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 177
             SY   KPPYSYI L  MAIQ+S  KML L+EIY++IMD FPFYR+N QRWQNS+RH+LSF
Sbjct:     8 SYDEQKPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNLSF 67

Query:   178 NDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NDCF+K+PR  D+PGKGS+W +H ++  MFENG  LRR+KRF+
Sbjct:    68 NDCFIKIPRRADRPGKGSYWAVHPNASGMFENGSCLRRRKRFR 110


>UNIPROTKB|P34683 [details] [associations]
            symbol:lin-31 "Protein lin-31" species:6239 "Caenorhabditis
            elegans" [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 GO:GO:0040011 GO:GO:0040018 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0040035 GO:GO:0003690 GO:GO:0040015
            GO:GO:0008134 GO:GO:0007389 GO:GO:0040025 GO:GO:0040027
            GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00700000104135 EMBL:L11148 EMBL:FO081624 PIR:A47368
            RefSeq:NP_494704.1 ProteinModelPortal:P34683 SMR:P34683
            IntAct:P34683 MINT:MINT-116445 STRING:P34683 EnsemblMetazoa:K10G6.1
            GeneID:173740 KEGG:cel:CELE_K10G6.1 UCSC:K10G6.1 CTD:173740
            WormBase:K10G6.1 InParanoid:P34683 OMA:GMFENGS NextBio:880883
            Uniprot:P34683
        Length = 237

 Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
 Identities = 68/103 (66%), Positives = 84/103 (81%)

Query:   118 SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 177
             SY   KPPYSYI L  MAIQ+S  KML L+EIY++IMD FPFYR+N QRWQNS+RH+LSF
Sbjct:     8 SYDEQKPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNLSF 67

Query:   178 NDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NDCF+K+PR  D+PGKGS+W +H ++  MFENG  LRR+KRF+
Sbjct:    68 NDCFIKIPRRADRPGKGSYWAVHPNASGMFENGSCLRRRKRFR 110


>MGI|MGI:1347463 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IDA] [GO:0001755
            "neural crest cell migration" evidence=IBA] [GO:0001822 "kidney
            development" evidence=IMP] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=IMP] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IMP] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IMP]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IDA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IMP] [GO:0072076 "nephrogenic
            mesenchyme development" evidence=IMP] [GO:0072210 "metanephric
            nephron development" evidence=IMP] [GO:0072213 "metanephric capsule
            development" evidence=IMP] [GO:0072267 "metanephric capsule
            specification" evidence=IMP] [GO:0072268 "pattern specification
            involved in metanephros development" evidence=IMP] [GO:0090184
            "positive regulation of kidney development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347463 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0030513 GO:GO:0051216 GO:GO:0008134
            GO:GO:0072210 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 CTD:2297
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 GO:GO:0072267
            EMBL:L38607 EMBL:AK132390 EMBL:AK142034 IPI:IPI00120011
            RefSeq:NP_032268.2 UniGene:Mm.347441 ProteinModelPortal:Q61345
            SMR:Q61345 STRING:Q61345 PhosphoSite:Q61345 PRIDE:Q61345
            Ensembl:ENSMUST00000105098 GeneID:15229 KEGG:mmu:15229
            HOGENOM:HOG000231285 InParanoid:Q3UQW8 OMA:GLQLQPY NextBio:287823
            Bgee:Q61345 CleanEx:MM_FOXD1 Genevestigator:Q61345 GO:GO:0072076
            Uniprot:Q61345
        Length = 456

 Score = 362 (132.5 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   130 KPPYSYIALITMAILQSPKKRLTLSEICEFISSRFPYYREKFPAWQNSIRHNLSLNDCFV 189

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   190 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 227

 Score = 41 (19.5 bits), Expect = 7.2e-36, Sum P(2) = 7.2e-36
 Identities = 8/16 (50%), Positives = 9/16 (56%)

Query:   320 AAMVASGRCHPHLIPP 335
             AA  A+   HPH  PP
Sbjct:   295 AAAAAAAAFHPHSPPP 310


>FB|FBgn0004898 [details] [associations]
            symbol:fd96Cb "forkhead domain 96Cb" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0009790 "embryo development" evidence=IBA;NAS]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0048806 "genitalia development" evidence=IBA] [GO:0007389
            "pattern specification process" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0048813 "dendrite
            morphogenesis" evidence=IBA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            EMBL:AE014297 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0048806 GO:GO:0008301
            GO:GO:0009790 GO:GO:0048813 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 eggNOG:COG5025 GO:GO:0009888 KO:K09411
            GeneTree:ENSGT00700000104135 EMBL:BT028866 EMBL:M96444 PIR:E46178
            RefSeq:NP_524496.1 UniGene:Dm.24089 ProteinModelPortal:P32029
            SMR:P32029 STRING:P32029 EnsemblMetazoa:FBtr0084771 GeneID:43011
            KEGG:dme:Dmel_CG11922 CTD:43011 FlyBase:FBgn0004898
            InParanoid:P32029 OMA:NTEMVTH OrthoDB:EOG4GF1WZ PhylomeDB:P32029
            GenomeRNAi:43011 NextBio:831800 Bgee:P32029 GermOnline:CG11922
            Uniprot:P32029
        Length = 271

 Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
 Identities = 70/105 (66%), Positives = 85/105 (80%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             + SY   KPPYSYISL  MAI +SP ++L LSEIY+FIMD FPFYR+N Q+WQNS+RH+L
Sbjct:     6 KMSYGDQKPPYSYISLTAMAIIHSPQRLLPLSEIYRFIMDQFPFYRKNTQKWQNSLRHNL 65

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             SFNDCF+KVPR   K GKGS+WTLH  + +MFENG  LRR+KRF+
Sbjct:    66 SFNDCFIKVPRNVTKAGKGSYWTLHPMAFDMFENGSLLRRRKRFR 110


>UNIPROTKB|F1PW06 [details] [associations]
            symbol:FOXF2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:SPYIKQQ EMBL:AAEX03017452
            EMBL:AAEX03017453 Ensembl:ENSCAFT00000014614 Uniprot:F1PW06
        Length = 449

 Score = 314 (115.6 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
 Identities = 56/98 (57%), Positives = 74/98 (75%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+NS+RH+LS N+CF+
Sbjct:    97 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 156

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   157 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 194

 Score = 55 (24.4 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query:   324 ASGRCHPHLIP---PDHYNHH 341
             A G  HPH  P   P H++HH
Sbjct:   256 APGHAHPHAHPHAHPHHHHHH 276

 Score = 52 (23.4 bits), Expect = 3.1e-35, Sum P(3) = 3.1e-35
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query:   324 ASGRCHPHLIPPDHYNHHL 342
             A    HPH  P  H++HH+
Sbjct:   260 AHPHAHPHAHPHHHHHHHV 278

 Score = 41 (19.5 bits), Expect = 1.5e-35, Sum P(3) = 1.5e-35
 Identities = 8/13 (61%), Positives = 9/13 (69%)

Query:    99 SPSPGALQRVARA 111
             SP PGALQ   R+
Sbjct:    25 SPGPGALQAALRS 37


>UNIPROTKB|Q12947 [details] [associations]
            symbol:FOXF2 "Forkhead box protein F2" species:9606 "Homo
            sapiens" [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0042249 "establishment of planar polarity of
            embryonic epithelium" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0048566 "embryonic digestive tract development" evidence=IEA]
            [GO:0048596 "embryonic camera-type eye morphogenesis" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008301 "DNA binding,
            bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC;IDA] [GO:0001837 "epithelial to
            mesenchymal transition" evidence=NAS] [GO:0048806 "genitalia
            development" evidence=IMP] [GO:0060021 "palate development"
            evidence=IMP] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA] [GO:0008134
            "transcription factor binding" evidence=IPI] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0003677 "DNA
            binding" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0043565 GO:GO:0045944 GO:GO:0030198
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0048806 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0048566 EMBL:CH471087 GO:GO:0060021 GO:GO:0007389
            GO:GO:0001837 GO:GO:0051090 GO:GO:0042249 eggNOG:COG5025
            HOGENOM:HOG000060124 KO:K09399 OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644
            EMBL:AF084939 EMBL:AF084938 EMBL:AL034346 EMBL:U13220
            IPI:IPI00030319 PIR:S51625 PIR:T09474 RefSeq:NP_001443.1
            UniGene:Hs.484423 ProteinModelPortal:Q12947 SMR:Q12947
            IntAct:Q12947 STRING:Q12947 PhosphoSite:Q12947 DMDM:8247925
            PaxDb:Q12947 PRIDE:Q12947 DNASU:2295 Ensembl:ENST00000259806
            GeneID:2295 KEGG:hsa:2295 UCSC:uc003mtm.3 CTD:2295
            GeneCards:GC06P001390 HGNC:HGNC:3810 MIM:603250 neXtProt:NX_Q12947
            PharmGKB:PA28227 InParanoid:Q12947 OMA:SPYIKQQ PhylomeDB:Q12947
            GenomeRNAi:2295 NextBio:9315 Bgee:Q12947 CleanEx:HS_FOXF2
            Genevestigator:Q12947 GermOnline:ENSG00000137273 Uniprot:Q12947
        Length = 444

 Score = 333 (122.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 70/152 (46%), Positives = 95/152 (62%)

Query:    70 SSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVAR-ADKTYRRSYTHAKPPYSY 128
             SS+ +A+C    +S N+A     A  +      GA    A+ A    RR     KPPYSY
Sbjct:    49 SSSSSASCASSSSSSNSASAPSAACKSAGGGGAGAGSGGAKKASSGLRRP---EKPPYSY 105

Query:   129 ISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTP 188
             I+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+NS+RH+LS N+CF+K+P+  
Sbjct:   106 IALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFIKLPKGL 165

Query:   189 DKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
              +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   166 GRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 197

 Score = 65 (27.9 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
 Identities = 20/62 (32%), Positives = 26/62 (41%)

Query:   273 SPETKPHLSELAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHL 332
             SP   P+L +   L  +   A SAGL HS     S  QS+  Q++     V   R   H 
Sbjct:   342 SPGASPYLKQPPALTPSSNPAASAGL-HSSMSSYSLEQSYLHQNAREDLSVGLPRYQHHS 400

Query:   333 IP 334
              P
Sbjct:   401 TP 402

 Score = 38 (18.4 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
 Identities = 7/19 (36%), Positives = 10/19 (52%)

Query:   324 ASGRCHPHLIPPDHYNHHL 342
             A    HPH     H++HH+
Sbjct:   259 APSHAHPH----HHHHHHV 273


>MGI|MGI:1347479 [details] [associations]
            symbol:Foxf2 "forkhead box F2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;IDA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=ISO;IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=ISO;IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0030198
            "extracellular matrix organization" evidence=IGI;IMP] [GO:0042249
            "establishment of planar polarity of embryonic epithelium"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISO] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISO;IBA] [GO:0048566 "embryonic digestive tract
            development" evidence=IGI] [GO:0048596 "embryonic camera-type eye
            morphogenesis" evidence=IMP] [GO:0048806 "genitalia development"
            evidence=ISO] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060021
            "palate development" evidence=ISO] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347479
            GO:GO:0043565 GO:GO:0045944 GO:GO:0030198 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0048806
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0048566
            GO:GO:0008134 GO:GO:0060021 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048596 GO:GO:0042249 eggNOG:COG5025 HSSP:Q99958
            GeneTree:ENSGT00690000101636 HOGENOM:HOG000060124 KO:K09399
            OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644 CTD:2295 OMA:SPYIKQQ
            EMBL:Y12293 EMBL:Y12294 EMBL:Y11148 EMBL:AK132385 EMBL:BC137947
            EMBL:BC137949 IPI:IPI00117732 RefSeq:NP_034355.2 UniGene:Mm.125548
            ProteinModelPortal:O54743 SMR:O54743 STRING:O54743
            PhosphoSite:O54743 Ensembl:ENSMUST00000042054 GeneID:14238
            KEGG:mmu:14238 InParanoid:B2RQI5 NextBio:285531 Bgee:O54743
            CleanEx:MM_FOXF2 Genevestigator:O54743 Uniprot:O54743
        Length = 446

 Score = 336 (123.3 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 71/166 (42%), Positives = 101/166 (60%)

Query:    56 MNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQR-VARADKT 114
             M+ P   +  S   SS+ ++A     +S + + + G  + A +S   GA      +A   
Sbjct:    35 MSPPPAATLESTSSSSSSSSASCASSSSNSVSASAGACKSAASSGGAGAGSGGTKKATSG 94

Query:   115 YRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHS 174
              RR     KPPYSYI+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+NS+RH+
Sbjct:    95 LRRP---EKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHN 151

Query:   175 LSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   152 LSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 197

 Score = 60 (26.2 bits), Expect = 3.9e-35, Sum P(2) = 3.9e-35
 Identities = 19/62 (30%), Positives = 25/62 (40%)

Query:   273 SPETKPHLSELAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHL 332
             SP   P+L +   L  +   A SAGL H      S  QS+  Q++     V   R   H 
Sbjct:   344 SPGASPYLKQPPALTPSSNPAASAGL-HPSMSSYSLEQSYLHQNAREDLSVGLPRYQHHS 402

Query:   333 IP 334
              P
Sbjct:   403 TP 404

 Score = 41 (19.5 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query:   324 ASGRCHPHLIPPDHYNH--HLKQEYGASAV-NHPFP 356
             A G  HPH +   H++H  H+    G++ + + P P
Sbjct:   259 APGHAHPHHL---HHHHVPHMSPNPGSTYMASCPVP 291


>UNIPROTKB|Q90WN4 [details] [associations]
            symbol:foxd2 "Forkhead box protein D2" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            KO:K09397 HSSP:Q63245 HOVERGEN:HBG051641 CTD:2306 EMBL:AJ344435
            EMBL:BC108569 RefSeq:NP_001079322.1 UniGene:Xl.12079
            ProteinModelPortal:Q90WN4 SMR:Q90WN4 GeneID:378641 KEGG:xla:378641
            Xenbase:XB-GENE-865311 Uniprot:Q90WN4
        Length = 346

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 78/165 (47%), Positives = 105/165 (63%)

Query:    65 GSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKP 124
             G MG      +      +S +    T R + A    S G+ +   RA+K+ + +    KP
Sbjct:    23 GDMGAKDGKYSDYHSDNDSDDNVARTPRGDPASPDLSSGS-ESNQRAEKSPKNALV--KP 79

Query:   125 PYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKV 184
             PYSYI+LITM+I  SP K LTLSEI +FI + FP+YR+    WQNSIRH+LS NDCFVK+
Sbjct:    80 PYSYIALITMSILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKI 139

Query:   185 PRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK-DDKKEVIR 228
             PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK     E++R
Sbjct:   140 PREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRQQSNEILR 184


>ZFIN|ZDB-GENE-040426-2094 [details] [associations]
            symbol:foxd1 "forkhead box D1" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-2094
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 KO:K09397 GO:GO:0048937 HOVERGEN:HBG051641
            GO:GO:0060678 GO:GO:0050935 HSSP:Q01167 EMBL:BC067138
            IPI:IPI00501340 RefSeq:NP_998078.1 UniGene:Dr.82970
            ProteinModelPortal:Q6NXD6 SMR:Q6NXD6 GeneID:405849 KEGG:dre:405849
            CTD:405849 InParanoid:Q6NXD6 NextBio:20817811 Uniprot:Q6NXD6
        Length = 343

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 77/152 (50%), Positives = 96/152 (63%)

Query:    79 GGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQN 138
             G   SY   +     E+  N   PG     AR         T  KPPYSYI+LITMAI  
Sbjct:    30 GHTRSYVDEVAQMHDEILLNGSPPGVDASPARDPYKPASKNTLVKPPYSYIALITMAILQ 89

Query:   139 SPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWT 198
             SP K LTLSEI  FI + FP+YR+    WQNSIRH+LS NDCFVK+PR P  PGKG++WT
Sbjct:    90 SPKKRLTLSEICDFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWT 149

Query:   199 LHKDSGNMFENGCYLRRQKRFKDDKK-EVIRQ 229
             L  +S +MF+NG +LRR+KRFK  +  E++R+
Sbjct:   150 LDPESADMFDNGSFLRRRKRFKRQQAPELLRE 181


>ZFIN|ZDB-GENE-061214-6 [details] [associations]
            symbol:foxe3 "forkhead box E3" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0001654 "eye development"
            evidence=IMP] [GO:0002088 "lens development in camera-type eye"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IMP] [GO:0060023 "soft palate development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IRD] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0030878 "thyroid gland development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IBA] [GO:0006590 "thyroid hormone
            generation" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IRD] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-061214-6 GO:GO:0016477 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0006590
            GO:GO:0002089 GO:GO:0060023 GO:GO:0009888 GO:GO:0060022
            GO:GO:0030878 GeneTree:ENSGT00700000104135 GO:GO:0048937
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 CTD:2301 EMBL:FP016062
            EMBL:BC163348 EMBL:BC163364 IPI:IPI00613897 RefSeq:NP_001073150.2
            UniGene:Dr.104252 SMR:B0UXI3 STRING:B0UXI3
            Ensembl:ENSDART00000091436 GeneID:570855 KEGG:dre:570855
            OMA:RENSKKW NextBio:20890323 Uniprot:B0UXI3
        Length = 422

 Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
 Identities = 66/112 (58%), Positives = 86/112 (76%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             A   +  +R     KPPYSYI+LI MAI NSP + LTL  IY+FIM+ FPFYR+N ++WQ
Sbjct:    89 ATGSRRRKRPVQRGKPPYSYIALIAMAIANSPERKLTLGGIYKFIMERFPFYRENSKKWQ 148

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NSIRH+L+ NDCFVK+PR P +PGKG++WTL   + +MF+NG +LRR+KRFK
Sbjct:   149 NSIRHNLTLNDCFVKIPREPGRPGKGNYWTLDPAAEDMFDNGSFLRRRKRFK 200


>UNIPROTKB|G3N0F0 [details] [associations]
            symbol:FOXD4L1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:GGCTSFS EMBL:DAAA02022790
            EMBL:DAAA02022786 EMBL:DAAA02022787 EMBL:DAAA02022788
            EMBL:DAAA02022789 Ensembl:ENSBTAT00000047052 Uniprot:G3N0F0
        Length = 447

 Score = 342 (125.4 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 64/99 (64%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  SP K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205

 Score = 46 (21.3 bits), Expect = 2.7e-34, Sum P(2) = 2.7e-34
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query:   327 RCHPHLIPPDHYNHHLKQEYGASAVNHPFPVSRLLP 362
             R HP   P DH +H        +A++ P+P   L P
Sbjct:   206 RHHPP--PGDHLHHPFPPPAAPAALHGPYPGMLLGP 239


>UNIPROTKB|F1NUD0 [details] [associations]
            symbol:F1NUD0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0001568 "blood
            vessel development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0050885 "neuromuscular process
            controlling balance" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0043565 GO:GO:0040018 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0043433
            GeneTree:ENSGT00690000101636 OMA:KEPWVAG EMBL:AADN02019090
            IPI:IPI00572257 Ensembl:ENSGALT00000039343 Uniprot:F1NUD0
        Length = 344

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 68/106 (64%), Positives = 84/106 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAIQ++P K +TLS IY++IM  F FYR N+Q WQNSIRH+LS N+CFV
Sbjct:    17 KPPYSYIALITMAIQSTPEKRITLSGIYRYIMGRFTFYRDNKQGWQNSIRHNLSLNECFV 76

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             KVPR   KPGKG++WTL  D  NMFENG +LRR++RF   +K  +R
Sbjct:    77 KVPRDDKKPGKGNYWTLDPDCHNMFENGSFLRRRRRFT--RKRALR 120


>ZFIN|ZDB-GENE-980605-6 [details] [associations]
            symbol:foxd2 "forkhead box D2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-6 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S HOGENOM:HOG000231285 EMBL:FP016062
            IPI:IPI00998144 RefSeq:NP_571346.2 UniGene:Dr.88583 SMR:B0UXI2
            Ensembl:ENSDART00000138176 GeneID:30525 KEGG:dre:30525 OMA:DNIIGAA
            NextBio:20806909 Uniprot:B0UXI2
        Length = 369

 Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
 Identities = 67/108 (62%), Positives = 85/108 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:    95 KPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 154

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDK-KEVIRQ 229
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK  +  E++R+
Sbjct:   155 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFKRHQTNEILRE 202


>ZFIN|ZDB-GENE-061116-1 [details] [associations]
            symbol:foxe1 "forkhead box E1 (thyroid transcription
            factor 2)" species:7955 "Danio rerio" [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0048703 "embryonic
            viscerocranium morphogenesis" evidence=IMP] [GO:0003419 "growth
            plate cartilage chondrocyte proliferation" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-061116-1 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003419
            GO:GO:0048703 GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398
            EMBL:BX005000 IPI:IPI00902176 RefSeq:XP_696065.1 UniGene:Dr.101314
            Ensembl:ENSDART00000109297 GeneID:567676 KEGG:dre:567676
            OMA:QLPSAYY NextBio:20888793 Uniprot:E7EZ33
        Length = 354

 Score = 365 (133.5 bits), Expect = 1.5e-33, P = 1.5e-33
 Identities = 62/105 (59%), Positives = 83/105 (79%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +R     KPPYSYI+LI+MAI NSP + LTL  IY+FI + FPFYR N ++WQNSIRH+L
Sbjct:    33 KRPLQRGKPPYSYIALISMAIANSPDRKLTLGGIYKFITERFPFYRDNSKKWQNSIRHNL 92

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             + NDCF+K+PR P +PGKG++W L  ++ +MFE+G +LRR+KRFK
Sbjct:    93 TLNDCFIKIPREPGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK 137


>UNIPROTKB|O60548 [details] [associations]
            symbol:FOXD2 "Forkhead box protein D2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=TAS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 HOGENOM:HOG000231285 EMBL:AF042832 EMBL:AL607122
            IPI:IPI00030209 RefSeq:NP_004465.3 UniGene:Hs.166188
            ProteinModelPortal:O60548 SMR:O60548 STRING:O60548
            PhosphoSite:O60548 PaxDb:O60548 PRIDE:O60548
            Ensembl:ENST00000334793 GeneID:2306 KEGG:hsa:2306 UCSC:uc001crm.3
            CTD:2306 GeneCards:GC01P047901 HGNC:HGNC:3803 MIM:602211
            neXtProt:NX_O60548 PharmGKB:PA28220 InParanoid:O60548 OMA:CEIMSSE
            PhylomeDB:O60548 GenomeRNAi:2306 NextBio:9367 Bgee:O60548
            CleanEx:HS_FOXD2 Genevestigator:O60548 GermOnline:ENSG00000186564
            Uniprot:O60548
        Length = 495

 Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
 Identities = 76/141 (53%), Positives = 92/141 (65%)

Query:    87 ALTTGRAELAENSPSPGALQRVARADK----TYRRSYTHA---KPPYSYISLITMAIQNS 139
             AL +  A  A  SP PGA      A          + T +   KPPYSYI+LITMAI  S
Sbjct:    84 ALASRGAAAAAGSPGPGAAAARGAAGPGPGPPSGGAATRSPLVKPPYSYIALITMAILQS 143

Query:   140 PTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTL 199
             P K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFVK+PR P  PGKG++WTL
Sbjct:   144 PKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTL 203

Query:   200 HKDSGNMFENGCYLRRQKRFK 220
               +S +MF+NG +LRR+KRFK
Sbjct:   204 DPESADMFDNGSFLRRRKRFK 224


>UNIPROTKB|Q9UJU5 [details] [associations]
            symbol:FOXD3 "Forkhead box protein D3" species:9606 "Homo
            sapiens" [GO:0001658 "branching involved in ureteric bud
            morphogenesis" evidence=IBA] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0001829 "trophectodermal cell differentiation"
            evidence=IBA] [GO:0001892 "embryonic placenta development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=ISS;IDA] [GO:0001701 "in utero embryonic development"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0000977 "RNA
            polymerase II regulatory region sequence-specific DNA binding"
            evidence=IDA] [GO:0001227 "RNA polymerase II transcription
            regulatory region sequence-specific DNA binding transcription
            factor activity involved in negative regulation of transcription"
            evidence=IDA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0001755 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0000790 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0001829 GO:GO:0008134 EMBL:AL049636
            GO:GO:0007389 GO:GO:0001658 GO:GO:0048485 GO:GO:0030318
            GO:GO:0000977 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 GO:GO:0001227 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 HOGENOM:HOG000231285 CTD:27022
            EMBL:AF197560 EMBL:L12142 IPI:IPI00007164 RefSeq:NP_036315.1
            UniGene:Hs.546573 ProteinModelPortal:Q9UJU5 SMR:Q9UJU5
            IntAct:Q9UJU5 STRING:Q9UJU5 PhosphoSite:Q9UJU5 DMDM:8134475
            PRIDE:Q9UJU5 DNASU:27022 Ensembl:ENST00000371116 GeneID:27022
            KEGG:hsa:27022 UCSC:uc001dax.2 GeneCards:GC01P063788 HGNC:HGNC:3804
            HPA:CAB022455 MIM:607836 MIM:611539 neXtProt:NX_Q9UJU5
            Orphanet:247871 PharmGKB:PA28221 InParanoid:Q9UJU5 OMA:AAGAYSH
            PhylomeDB:Q9UJU5 GenomeRNAi:27022 NextBio:49550 Bgee:Q9UJU5
            CleanEx:HS_FOXD3 Genevestigator:Q9UJU5 GermOnline:ENSG00000187140
            Uniprot:Q9UJU5
        Length = 478

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 72/139 (51%), Positives = 92/139 (66%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
             G  E   +   PGA    A      +   +  KPPYSYI+LITMAI  SP K LTLS I 
Sbjct:   109 GGEEGGASGGGPGAGSGSAGGLAPSKPKNSLVKPPYSYIALITMAILQSPQKKLTLSGIC 168

Query:   151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENG 210
             +FI + FP+YR+    WQNSIRH+LS NDCFVK+PR P  PGKG++WTL   S +MF+NG
Sbjct:   169 EFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSEDMFDNG 228

Query:   211 CYLRRQKRFKDDKKEVIRQ 229
              +LRR+KRFK  ++E +R+
Sbjct:   229 SFLRRRKRFKRHQQEHLRE 247


>UNIPROTKB|Q6F2E4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0001755 "neural crest cell migration" evidence=ISS;IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISS] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007398 "ectoderm development" evidence=ISS]
            [GO:0007399 "nervous system development" evidence=ISS] [GO:0007422
            "peripheral nervous system development" evidence=IBA] [GO:0007498
            "mesoderm development" evidence=ISS] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030336
            "negative regulation of cell migration" evidence=ISS] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0030900 "forebrain development" evidence=ISS] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0007498
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0030900
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0030336
            GO:GO:0009790 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0007398 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GeneTree:ENSGT00700000104135 KO:K09397
            GO:GO:0048937 HSSP:Q63245 CTD:2297 HOVERGEN:HBG051641
            OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            EMBL:AC149037 EMBL:BC081361 RefSeq:NP_001008148.1 UniGene:Str.9073
            ProteinModelPortal:Q6F2E4 SMR:Q6F2E4 STRING:Q6F2E4
            Ensembl:ENSXETT00000036667 GeneID:493510 KEGG:xtr:493510
            Xenbase:XB-GENE-488077 InParanoid:Q6F2E4 Bgee:Q6F2E4 Uniprot:Q6F2E4
        Length = 329

 Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
 Identities = 65/98 (66%), Positives = 79/98 (80%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:    68 KPPYSYIALITMAILQSPKKRLTLSEICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 127

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   128 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 165


>UNIPROTKB|Q70VZ3 [details] [associations]
            symbol:foxE "Uncharacterized protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0016477 "cell
            migration" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048562 "embryonic organ morphogenesis" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0048846
            "axon extension involved in axon guidance" evidence=IRD]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0048484 GO:GO:0051090 GO:GO:0009888
            GeneTree:ENSGT00700000104135 GO:GO:0048937 GO:GO:0048562
            HSSP:Q01167 EMBL:EAAA01002052 EMBL:AJ534401 RefSeq:NP_001027947.1
            UniGene:Cin.14354 SMR:Q70VZ3 Ensembl:ENSCINT00000015355
            GeneID:445746 KEGG:cin:445746 CTD:445746 HOGENOM:HOG000169920
            HOVERGEN:HBG065789 InParanoid:Q70VZ3 Uniprot:Q70VZ3
        Length = 721

 Score = 370 (135.3 bits), Expect = 3.0e-33, P = 3.0e-33
 Identities = 64/110 (58%), Positives = 85/110 (77%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +R     KPPYSYI+LI+MAI +SP + LTL  IY+FIM+ FPFYR+  ++WQNSIRH+L
Sbjct:   344 KRPIQRGKPPYSYIALISMAIASSPERKLTLGHIYKFIMERFPFYREQNKKWQNSIRHNL 403

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             + NDCF+K+PR P KPGKG++WTL   + +MF+NG +LRR+KRFK    E
Sbjct:   404 TLNDCFIKLPREPGKPGKGNYWTLDPAAEDMFDNGSFLRRRKRFKRSDTE 453


>UNIPROTKB|E1BIV1 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0001892 "embryonic placenta development"
            evidence=IEA] [GO:0001829 "trophectodermal cell differentiation"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212 GO:GO:0001829
            GO:GO:0001892 GeneTree:ENSGT00700000104135 KO:K09397 CTD:27022
            OMA:AAGAYSH EMBL:DAAA02008563 IPI:IPI00687955 RefSeq:XP_002686387.1
            RefSeq:XP_610898.3 Ensembl:ENSBTAT00000011206 GeneID:532383
            KEGG:bta:532383 NextBio:20875676 Uniprot:E1BIV1
        Length = 481

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 66/107 (61%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   141 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 200

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E +R+
Sbjct:   201 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 247


>UNIPROTKB|E2QS90 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0001829 GO:GO:0001892 Ensembl:ENSCAFT00000021812
            Uniprot:E2QS90
        Length = 411

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 66/107 (61%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   142 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 201

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E +R+
Sbjct:   202 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 248


>UNIPROTKB|F6USR8 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:AAGAYSH Ensembl:ENSCAFT00000021812
            EMBL:AAEX03003765 EMBL:AAEX03003766 Uniprot:F6USR8
        Length = 439

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 66/107 (61%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   142 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 201

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E +R+
Sbjct:   202 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 248


>UNIPROTKB|J9P9K1 [details] [associations]
            symbol:FOXD3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 EMBL:AAEX03003765 EMBL:AAEX03003766
            Ensembl:ENSCAFT00000048793 Uniprot:J9P9K1
        Length = 370

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 66/107 (61%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   125 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 184

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E +R+
Sbjct:   185 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 231


>MGI|MGI:1347473 [details] [associations]
            symbol:Foxd3 "forkhead box D3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA;IDA] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
            region sequence-specific DNA binding" evidence=ISO] [GO:0001227
            "RNA polymerase II transcription regulatory region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0001701 "in utero embryonic development"
            evidence=IDA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001829 "trophectodermal cell differentiation" evidence=IMP]
            [GO:0001892 "embryonic placenta development" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=ISO;IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IC] [GO:0005667
            "transcription factor complex" evidence=IBA;TAS] [GO:0006351
            "transcription, DNA-dependent" evidence=TAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007275 "multicellular organismal development" evidence=IEA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007422 "peripheral nervous system development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1347473 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0044212 GO:GO:0001822 GO:GO:0003690 GO:GO:0051216
            GO:GO:0001829 GO:GO:0008134 EMBL:BX005053 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0001892
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025 KO:K09397
            GO:GO:0048937 HOVERGEN:HBG051641 GO:GO:0050935 CTD:27022
            EMBL:U41047 EMBL:AF067421 IPI:IPI00828232 RefSeq:NP_034555.3
            UniGene:Mm.4758 ProteinModelPortal:Q61060 SMR:Q61060 STRING:Q61060
            PhosphoSite:Q61060 PRIDE:Q61060 DNASU:15221 GeneID:15221
            KEGG:mmu:15221 InParanoid:Q61060 OrthoDB:EOG4FN4KH NextBio:287807
            Bgee:Q61060 CleanEx:MM_FOXD3 Genevestigator:Q61060
            GermOnline:ENSMUSG00000067261 Uniprot:Q61060
        Length = 465

 Score = 362 (132.5 bits), Expect = 3.2e-33, P = 3.2e-33
 Identities = 66/107 (61%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   131 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 190

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E +R+
Sbjct:   191 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQQEHLRE 237


>UNIPROTKB|Q98937 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007422 "peripheral nervous system development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0030318 "melanocyte
            differentiation" evidence=IBA] [GO:0030513 "positive regulation of
            BMP signaling pathway" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            EMBL:U47276 IPI:IPI00590831 PIR:S71795 RefSeq:NP_990523.1
            UniGene:Gga.253 UniGene:Gga.51521 ProteinModelPortal:Q98937
            SMR:Q98937 STRING:Q98937 GeneID:396109 KEGG:gga:396109 CTD:2297
            HOVERGEN:HBG051641 InParanoid:Q98937 OrthoDB:EOG45MN6S
            NextBio:20816167 GO:GO:0060678 GO:GO:0050935 Uniprot:Q98937
        Length = 440

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   143 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 202

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   203 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 240


>UNIPROTKB|G3MX55 [details] [associations]
            symbol:G3MX55 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104135
            OMA:CEIMSSE EMBL:DAAA02008974 EMBL:DAAA02008975
            Ensembl:ENSBTAT00000063136 Uniprot:G3MX55
        Length = 424

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   100 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 159

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   160 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 197


>UNIPROTKB|J3KT45 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HGNC:HGNC:3802 ChiTaRS:FOXD1
            EMBL:AC099522 ProteinModelPortal:J3KT45 Ensembl:ENST00000499003
            Uniprot:J3KT45
        Length = 459

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   125 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 184

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   185 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 222


>MGI|MGI:1347471 [details] [associations]
            symbol:Foxd2 "forkhead box D2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347471
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 HOGENOM:HOG000231285 CTD:2306 OMA:CEIMSSE
            EMBL:AF023915 EMBL:AL670035 IPI:IPI00130007 RefSeq:NP_032619.1
            UniGene:Mm.7997 ProteinModelPortal:O35392 SMR:O35392
            PhosphoSite:O35392 PRIDE:O35392 Ensembl:ENSMUST00000068654
            GeneID:17301 KEGG:mmu:17301 UCSC:uc012dix.1 InParanoid:A2AD43
            NextBio:291838 Bgee:O35392 CleanEx:MM_FOXD2 Genevestigator:O35392
            GermOnline:ENSMUSG00000055210 Uniprot:O35392
        Length = 492

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   129 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 188

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   189 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 226


>RGD|1304642 [details] [associations]
            symbol:Foxd2 "forkhead box D2" species:10116 "Rattus norvegicus"
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] [GO:0060678 "dichotomous subdivision of terminal
            units involved in ureteric bud branching" evidence=IBA] [GO:0090184
            "positive regulation of kidney development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:1304642 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 GeneTree:ENSGT00700000104135 GO:GO:0048937
            GO:GO:0060678 GO:GO:0050935 OMA:CEIMSSE IPI:IPI00358989
            Ensembl:ENSRNOT00000010201 NextBio:666291 ArrayExpress:F1LP85
            Uniprot:F1LP85
        Length = 494

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   131 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 190

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   191 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 228


>RGD|621712 [details] [associations]
            symbol:Foxd1 "forkhead box D1" species:10116 "Rattus norvegicus"
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=ISO] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=ISO]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007411 "axon guidance"
            evidence=ISO] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISO;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0010628
            "positive regulation of gene expression" evidence=ISO;ISS]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway"
            evidence=ISO;ISS;IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA;ISO] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=ISO;IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=ISO;ISS;IBA] [GO:0072076
            "nephrogenic mesenchyme development" evidence=IEA;ISO] [GO:0072210
            "metanephric nephron development" evidence=IEA;ISO] [GO:0072213
            "metanephric capsule development" evidence=ISO;ISS] [GO:0072267
            "metanephric capsule specification" evidence=ISO;ISS] [GO:0072268
            "pattern specification involved in metanephros development"
            evidence=ISO] [GO:0090184 "positive regulation of kidney
            development" evidence=ISO;ISS;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621712
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0060678
            GO:GO:0050935 GO:GO:0072267 HOGENOM:HOG000231285 EMBL:L13192
            IPI:IPI00551801 PIR:I60922 UniGene:Rn.50822
            ProteinModelPortal:Q63251 SMR:Q63251 STRING:Q63251 UCSC:RGD:621712
            InParanoid:Q63251 ArrayExpress:Q63251 Genevestigator:Q63251
            GermOnline:ENSRNOG00000007759 Uniprot:Q63251
        Length = 101

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI +FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:     3 KPPYSYIALITMAILQSPKKRLTLSEICEFISGRFPYYREKFPAWQNSIRHNLSLNDCFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:    63 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 100


>ZFIN|ZDB-GENE-980526-143 [details] [associations]
            symbol:foxd3 "forkhead box D3" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0009790 "embryo
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0001822
            "kidney development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0001658 "branching
            involved in ureteric bud morphogenesis" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IGI] [GO:0010629 "negative regulation of gene expression"
            evidence=IGI;IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0060351 "cartilage
            development involved in endochondral bone morphogenesis"
            evidence=IMP] [GO:0014032 "neural crest cell development"
            evidence=IGI;IMP] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0001071 "nucleic acid binding transcription
            factor activity" evidence=IDA] [GO:0051216 "cartilage development"
            evidence=IMP] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IMP] [GO:0048484 "enteric nervous system
            development" evidence=IMP] [GO:0050935 "iridophore differentiation"
            evidence=IMP] [GO:0007422 "peripheral nervous system development"
            evidence=IMP] [GO:0050931 "pigment cell differentiation"
            evidence=IGI;IMP] [GO:0048485 "sympathetic nervous system
            development" evidence=IMP] [GO:0001755 "neural crest cell
            migration" evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980526-143 GO:GO:0045892 GO:GO:0001755 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0001822 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 GO:GO:0060351 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0050935 EMBL:BC095603 IPI:IPI00512255
            UniGene:Dr.75816 ProteinModelPortal:Q502Q4 SMR:Q502Q4
            InParanoid:Q502Q4 ArrayExpress:Q502Q4 Uniprot:Q502Q4
        Length = 371

 Score = 361 (132.1 bits), Expect = 4.1e-33, P = 4.1e-33
 Identities = 65/106 (61%), Positives = 82/106 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:    96 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 155

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  + +++R
Sbjct:   156 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRHQPDILR 201


>UNIPROTKB|Q5M7L9 [details] [associations]
            symbol:foxd3 "Forkhead box protein D3" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0014034 "neural crest cell fate commitment"
            evidence=ISS] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050768 "negative regulation of
            neurogenesis" evidence=ISS] [GO:0050769 "positive regulation of
            neurogenesis" evidence=ISS] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0050769
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0001658 GO:GO:0048485 GO:GO:0030318 GO:GO:0050768
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0050935
            HOGENOM:HOG000231285 CTD:27022 EMBL:CR760163 EMBL:BC088566
            RefSeq:NP_001011383.1 UniGene:Str.11302 ProteinModelPortal:Q5M7L9
            SMR:Q5M7L9 STRING:Q5M7L9 Ensembl:ENSXETT00000023699 GeneID:496851
            KEGG:xtr:496851 Xenbase:XB-GENE-487289 InParanoid:Q5M7L9
            OMA:SSMISGH Bgee:Q5M7L9 Uniprot:Q5M7L9
        Length = 369

 Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
 Identities = 72/145 (49%), Positives = 95/145 (65%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTH------AKPPYSYISLITMAIQNSPTKML 144
             G  E+A  SPS  A +   + +   +    +       KPPYSYI+LITMAI  SP K L
Sbjct:    55 GGKEIAR-SPSGSANEAEGKGESQQQEGMQNKPKNSLVKPPYSYIALITMAILQSPQKKL 113

Query:   145 TLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSG 204
             TLS I +FI + FP+YR+    WQNSIRH+LS NDCFVK+PR P  PGKG++WTL   S 
Sbjct:   114 TLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTLDPQSE 173

Query:   205 NMFENGCYLRRQKRFKDDKKEVIRQ 229
             +MF+NG +LRR+KRFK  + + +R+
Sbjct:   174 DMFDNGSFLRRRKRFKRQQPDSLRE 198


>UNIPROTKB|Q13461 [details] [associations]
            symbol:FOXE3 "Forkhead box protein E3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IDA;TAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0007275 "multicellular organismal development" evidence=NAS]
            [GO:0002089 "lens morphogenesis in camera-type eye" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0006590 "thyroid
            hormone generation" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IRD] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0016477 "cell migration"
            evidence=IBA] [GO:0030878 "thyroid gland development" evidence=IBA]
            [GO:0031069 "hair follicle morphogenesis" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IRD] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IBA] [GO:0048846 "axon extension involved
            in axon guidance" evidence=IRD] [GO:0048937 "lateral line nerve
            glial cell development" evidence=IRD] [GO:0050679 "positive
            regulation of epithelial cell proliferation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0060022 "hard
            palate development" evidence=IBA] [GO:0060023 "soft palate
            development" evidence=IBA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=NAS] [GO:0005667
            "transcription factor complex" evidence=IDA] [GO:0006366
            "transcription from RNA polymerase II promoter" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048468
            GO:GO:0048484 GO:GO:0051090 GO:GO:0031069 GO:GO:0050679
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 EMBL:AL607122 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 EMBL:AF275722
            EMBL:U42990 IPI:IPI00013354 PIR:G02311 RefSeq:NP_036318.1
            UniGene:Hs.112968 ProteinModelPortal:Q13461 SMR:Q13461
            STRING:Q13461 PhosphoSite:Q13461 DMDM:12644406 PRIDE:Q13461
            DNASU:2301 Ensembl:ENST00000335071 GeneID:2301 KEGG:hsa:2301
            UCSC:uc001crk.3 CTD:2301 GeneCards:GC01P047881 HGNC:HGNC:3808
            MIM:107250 MIM:601094 MIM:610256 neXtProt:NX_Q13461 Orphanet:83461
            Orphanet:88632 PharmGKB:PA28225 InParanoid:Q13461 OMA:FPYAPFP
            OrthoDB:EOG4001JR PhylomeDB:Q13461 GenomeRNAi:2301 NextBio:9341
            Bgee:Q13461 CleanEx:HS_FOXE3 Genevestigator:Q13461
            GermOnline:ENSG00000186790 Uniprot:Q13461
        Length = 319

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/130 (53%), Positives = 92/130 (70%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
             GR E A  +P+PG  +R        RR     KPPYSYI+LI MA+ ++P + LTL+ IY
Sbjct:    47 GRGEAAP-TPAPGPGRR-------RRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIY 98

Query:   151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENG 210
             +FI + F FYR + ++WQNSIRH+L+ NDCFVKVPR P  PGKG++WTL   + +MF+NG
Sbjct:    99 RFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNG 158

Query:   211 CYLRRQKRFK 220
              +LRR+KRFK
Sbjct:   159 SFLRRRKRFK 168


>UNIPROTKB|F1S6E0 [details] [associations]
            symbol:FOXE3 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] [GO:0048468 "cell development"
            evidence=IEA] [GO:0043010 "camera-type eye development"
            evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0043010 GO:GO:0006366 GO:GO:0048468 GO:GO:0050679
            GeneTree:ENSGT00700000104135 OMA:FPYAPFP EMBL:CU694906
            Ensembl:ENSSSCT00000004296 Uniprot:F1S6E0
        Length = 324

 Score = 359 (131.4 bits), Expect = 6.7e-33, P = 6.7e-33
 Identities = 69/130 (53%), Positives = 92/130 (70%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
             GR E  E +P+PG  +R        RR     KPPYSYI+LI MA+ ++P + LTL+ IY
Sbjct:    47 GRGE-PEPAPAPGPGRR-------RRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIY 98

Query:   151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENG 210
             +FI + F FYR + ++WQNSIRH+L+ NDCFVKVPR P  PGKG++WTL   + +MF+NG
Sbjct:    99 RFITERFAFYRDSPRKWQNSIRHNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNG 158

Query:   211 CYLRRQKRFK 220
              +LRR+KRFK
Sbjct:   159 SFLRRRKRFK 168


>UNIPROTKB|Q9DEN3 [details] [associations]
            symbol:foxd3-b "Forkhead box protein D3-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=ISS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0050768 KO:K09397 HSSP:Q63245
            GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AJ298866 EMBL:BC072772
            RefSeq:NP_001079078.1 UniGene:Xl.523 ProteinModelPortal:Q9DEN3
            SMR:Q9DEN3 GeneID:373610 KEGG:xla:373610 CTD:373610
            Xenbase:XB-GENE-6252892 Uniprot:Q9DEN3
        Length = 371

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 63/107 (58%), Positives = 82/107 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITM+I  SP K LTLS I +FI   FP+YR+    WQNSIRH+LS NDCF+
Sbjct:    94 KPPYSYIALITMSILQSPQKKLTLSGICEFISSRFPYYREKFPAWQNSIRHNLSLNDCFI 153

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  +++ +R+
Sbjct:   154 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRQQQDTLRE 200


>UNIPROTKB|Q9DEN4 [details] [associations]
            symbol:foxd3-a "Forkhead box protein D3-A" species:8355
            "Xenopus laevis" [GO:0001707 "mesoderm formation" evidence=IMP]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IMP;IDA] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0050769 GO:GO:0001707 GO:GO:0050768 KO:K09397
            HSSP:Q63245 GO:GO:0014034 HOVERGEN:HBG051641 EMBL:AB014611
            EMBL:AJ298865 EMBL:BC123272 PIR:G56556 RefSeq:NP_001079026.1
            UniGene:Xl.525 ProteinModelPortal:Q9DEN4 SMR:Q9DEN4 GeneID:373548
            KEGG:xla:373548 CTD:373548 Xenbase:XB-GENE-865691 Uniprot:Q9DEN4
        Length = 371

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 64/107 (59%), Positives = 83/107 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITM+I  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:    94 KPPYSYIALITMSILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 153

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIRQ 229
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  +++ +R+
Sbjct:   154 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFKRQQQDSLRE 200


>UNIPROTKB|Q9PSY4 [details] [associations]
            symbol:foxd1 "Forkhead box protein D1" species:8355
            "Xenopus laevis" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=IDA;IMP] [GO:0001755
            "neural crest cell migration" evidence=IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0007398 "ectoderm development" evidence=IMP]
            [GO:0007399 "nervous system development" evidence=IMP] [GO:0007498
            "mesoderm development" evidence=IMP] [GO:0030336 "negative
            regulation of cell migration" evidence=IMP] [GO:0030900 "forebrain
            development" evidence=IMP] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0007498 GO:GO:0001755 GO:GO:0043565 GO:GO:0030900
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0000122 GO:GO:0030336 GO:GO:0007398 KO:K09397 HSSP:Q63245
            CTD:2297 HOVERGEN:HBG051641 EMBL:AF072889 EMBL:AJ011652
            EMBL:BC108577 RefSeq:NP_001079052.1 UniGene:Xl.66
            ProteinModelPortal:Q9PSY4 SMR:Q9PSY4 GeneID:373583 KEGG:xla:373583
            Xenbase:XB-GENE-865762 Uniprot:Q9PSY4
        Length = 345

 Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
 Identities = 64/98 (65%), Positives = 77/98 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITM+I  SP K LTLSEI  FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:    68 KPPYSYIALITMSILQSPKKRLTLSEICDFISSRFPYYREKFPAWQNSIRHNLSLNDCFV 127

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MF+NG +LRR+KRFK
Sbjct:   128 KIPREPGNPGKGNYWTLDPESADMFDNGSFLRRRKRFK 165


>UNIPROTKB|Q9W706 [details] [associations]
            symbol:foxf1-a "Forkhead box protein F1-A" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242680 RefSeq:NP_001084262.1 UniGene:Xl.182
            ProteinModelPortal:Q9W706 SMR:Q9W706 GeneID:399398 KEGG:xla:399398
            CTD:399398 Xenbase:XB-GENE-865226 Uniprot:Q9W706
        Length = 373

 Score = 329 (120.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query:   102 PGALQRVARADKTYRRSY---THAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFP 158
             P A++  + A KT + +       KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FP
Sbjct:    30 PSAMESASCATKTKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFP 89

Query:   159 FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             F+R + Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + 
Sbjct:    90 FFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRG 149

Query:   219 FK 220
             F+
Sbjct:   150 FR 151

 Score = 43 (20.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query:   289 TKEDAMSAGLLHSDFQQNSYHQSFHQQDSEL 319
             T  + +S+ L      Q+  HQ+ H   SEL
Sbjct:   290 TAANPLSSSLSSHSLDQSYLHQNSHNTASEL 320


>UNIPROTKB|Q9W707 [details] [associations]
            symbol:foxf1-b "Forkhead box protein F1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=ISS;NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008283 "cell proliferation" evidence=IMP]
            [GO:0030509 "BMP signaling pathway" evidence=IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=IMP]
            [GO:0048745 "smooth muscle tissue development" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            GO:GO:0048745 HSSP:Q99958 KO:K09399 HOVERGEN:HBG051644
            EMBL:AJ242679 EMBL:BC108567 RefSeq:NP_001090140.1 UniGene:Xl.54939
            ProteinModelPortal:Q9W707 SMR:Q9W707 GeneID:735218 KEGG:xla:735218
            CTD:735218 Xenbase:XB-GENE-6254084 Uniprot:Q9W707
        Length = 372

 Score = 329 (120.9 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 62/122 (50%), Positives = 85/122 (69%)

Query:   102 PGALQRVARADKTYRRSY---THAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFP 158
             P A++  + A KT + +       KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FP
Sbjct:    30 PSAMESASCATKTKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFP 89

Query:   159 FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             F+R + Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + 
Sbjct:    90 FFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRG 149

Query:   219 FK 220
             F+
Sbjct:   150 FR 151

 Score = 43 (20.2 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query:   289 TKEDAMSAGLLHSDFQQNSYHQSFHQQDSEL 319
             T  + +S+ L      Q+  HQ+ H   SEL
Sbjct:   289 TAANPLSSSLSSHSLDQSYLHQNSHNTASEL 319


>UNIPROTKB|F1M2L0 [details] [associations]
            symbol:F1M2L0 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 IPI:IPI00192291
            Ensembl:ENSRNOT00000023980 Uniprot:F1M2L0
        Length = 351

 Score = 314 (115.6 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 56/98 (57%), Positives = 74/98 (75%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+NS+RH+LS N+CF+
Sbjct:    23 KPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 82

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    83 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 120

 Score = 58 (25.5 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
 Identities = 19/64 (29%), Positives = 27/64 (42%)

Query:   273 SPETKPHLSELAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASG--RCHP 330
             SP   P+L +   L  +   A SAGL H      S  QS+  Q++  +  +  G  R   
Sbjct:   247 SPGASPYLKQPPALTPSSNPAASAGL-HPSMSSYSLEQSYLHQNARESPSILLGLPRYQH 305

Query:   331 HLIP 334
             H  P
Sbjct:   306 HSTP 309

 Score = 40 (19.1 bits), Expect = 9.9e-31, Sum P(2) = 9.9e-31
 Identities = 9/28 (32%), Positives = 15/28 (53%)

Query:   324 ASGRCHPHLIPPDHYNH--HLKQEYGAS 349
             A G  HPH +   H++H  H+    G++
Sbjct:   176 APGHAHPHHL---HHHHVPHMSPNPGST 200


>UNIPROTKB|O00358 [details] [associations]
            symbol:FOXE1 "Forkhead box protein E1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0009653 "anatomical structure morphogenesis"
            evidence=NAS] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006590 "thyroid hormone generation"
            evidence=ISS;IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=ISS;IBA] [GO:0031069 "hair
            follicle morphogenesis" evidence=ISS;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IRD] [GO:0048485 "sympathetic nervous system development"
            evidence=IRD] [GO:0048562 "embryonic organ morphogenesis"
            evidence=ISS;IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IRD] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IRD] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development" evidence=IMP]
            [GO:0060023 "soft palate development" evidence=IMP] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0030878 "thyroid gland development" evidence=IEP;IMP]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0003677 "DNA binding" evidence=IDA] [GO:0048538 "thymus
            development" evidence=IEP] [GO:0060465 "pharynx development"
            evidence=IEP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0016477 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 EMBL:CH471105
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 GO:GO:0007389
            GO:GO:0060465 GO:GO:0051090 GO:GO:0031069 GO:GO:0006590
            Orphanet:146 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 EMBL:X94553 EMBL:U89995 EMBL:Y13386
            EMBL:AL499604 IPI:IPI00879523 RefSeq:NP_004464.2 UniGene:Hs.159234
            ProteinModelPortal:O00358 SMR:O00358 STRING:O00358
            PhosphoSite:O00358 PRIDE:O00358 DNASU:2304 Ensembl:ENST00000375123
            GeneID:2304 KEGG:hsa:2304 UCSC:uc004axu.3 CTD:2304
            GeneCards:GC09P100615 H-InvDB:HIX0034929 HGNC:HGNC:3806 MIM:241850
            MIM:602617 neXtProt:NX_O00358 Orphanet:95713 Orphanet:1226
            Orphanet:95720 PharmGKB:PA28223 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 InParanoid:O00358 KO:K09398 OMA:TGYQPAG
            GenomeRNAi:2304 NextBio:9355 Bgee:O00358 CleanEx:HS_FOXE1
            CleanEx:HS_TTF2 Genevestigator:O00358 GermOnline:ENSG00000178919
            GO:GO:0048562 Uniprot:O00358
        Length = 373

 Score = 356 (130.4 bits), Expect = 1.4e-32, P = 1.4e-32
 Identities = 64/129 (49%), Positives = 88/129 (68%)

Query:    92 RAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQ 151
             R E A  +  PG         +  +R     KPPYSYI+LI MAI ++P + LTL  IY+
Sbjct:    22 RGETAAGAGVPGEATGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYK 81

Query:   152 FIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGC 211
             FI + FPFYR N ++WQNSIRH+L+ NDCF+K+PR   +PGKG++W L  ++ +MFE+G 
Sbjct:    82 FITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGS 141

Query:   212 YLRRQKRFK 220
             +LRR+KRFK
Sbjct:   142 FLRRRKRFK 150


>UNIPROTKB|Q4H3J2 [details] [associations]
            symbol:Ci-FoxD-a/b "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0016477 "cell migration"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0016477 GO:GO:0043565
            GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0048484 GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025
            GO:GO:0009888 GO:GO:0048937 EMBL:AB210430 RefSeq:NP_001071709.1
            UniGene:Cin.20900 ProteinModelPortal:Q4H3J2 SMR:Q4H3J2
            GeneID:778610 KEGG:cin:778610 CTD:778610 HOGENOM:HOG000169941
            HOVERGEN:HBG074430 InParanoid:Q4H3J2 Uniprot:Q4H3J2
        Length = 611

 Score = 361 (132.1 bits), Expect = 1.5e-32, P = 1.5e-32
 Identities = 69/143 (48%), Positives = 96/143 (67%)

Query:    87 ALTTGRAELAENSPSPGALQRVARADKTY-RRSYTHAKPPYSYISLITMAIQNSPTKMLT 145
             A ++G  E  E       L+++    + Y   S  + KPPYSYI+LITM+I  SP K LT
Sbjct:   174 ASSSGEDETREKDEE---LRKIGEEMEEYSNESKKNVKPPYSYIALITMSILQSPDKKLT 230

Query:   146 LSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGN 205
             LS I  FIM+ FP+Y++    WQNSIRH+LS NDCFVK+PR P  PGKG++WT+  ++ +
Sbjct:   231 LSGICDFIMNRFPYYKEKFPAWQNSIRHNLSLNDCFVKIPREPGNPGKGNYWTMDPEAED 290

Query:   206 MFENGCYLRRQKRFKDDKKEVIR 228
             MF+NG +LRR+KRFK  +++  R
Sbjct:   291 MFDNGSFLRRRKRFKRQQRDPFR 313


>ZFIN|ZDB-GENE-041001-130 [details] [associations]
            symbol:foxf2b "forkhead box F2b" species:7955
            "Danio rerio" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-041001-130 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:BX510653 IPI:IPI00636707
            RefSeq:XP_003200754.1 Ensembl:ENSDART00000103232 GeneID:100002904
            KEGG:dre:100002904 NextBio:20785637 Uniprot:E7FER3
        Length = 429

 Score = 329 (120.9 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
 Identities = 64/135 (47%), Positives = 87/135 (64%)

Query:    86 TALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLT 145
             TAL  G      N     A+ +  + +   RR     KPPYSYI+LI MAIQ++PTK LT
Sbjct:    77 TALHPGLMNSTGNLEEHSAVSKSKKTNSGLRRP---EKPPYSYIALIVMAIQSAPTKRLT 133

Query:   146 LSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGN 205
             LSEIYQF+   FPF+R + Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  
Sbjct:   134 LSEIYQFLQTRFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPTSEF 193

Query:   206 MFENGCYLRRQKRFK 220
             MFE G + RR + F+
Sbjct:   194 MFEEGSFRRRPRGFR 208

 Score = 41 (19.5 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
 Identities = 9/28 (32%), Positives = 13/28 (46%)

Query:   287 GLTKEDAMSAGLLHSDFQQNSYHQSFHQ 314
             G+T     + G  H     + +HQS HQ
Sbjct:   396 GITSFHPSAGGYYHHHHHHH-HHQSMHQ 422


>UNIPROTKB|Q12952 [details] [associations]
            symbol:FOXL1 "Forkhead box protein L1" species:9606 "Homo
            sapiens" [GO:0007507 "heart development" evidence=IMP] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0007275 "multicellular
            organismal development" evidence=NAS] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007420 "brain development" evidence=IBA]
            [GO:0007495 "visceral mesoderm-endoderm interaction involved in
            midgut development" evidence=ISS;IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0009887 "organ morphogenesis" evidence=ISS;IBA]
            [GO:0030111 "regulation of Wnt receptor signaling pathway"
            evidence=ISS;IBA] [GO:0030166 "proteoglycan biosynthetic process"
            evidence=ISS;IBA] [GO:0035136 "forelimb morphogenesis"
            evidence=IBA] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=NAS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0003677
            "DNA binding" evidence=IDA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0007420 GO:GO:0007507
            GO:GO:0030111 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0035136 GO:GO:0051090
            GO:GO:0030166 eggNOG:COG5025 OrthoDB:EOG4MCX19 EMBL:AC009108
            EMBL:AF315075 EMBL:BC117226 EMBL:U13225 IPI:IPI00030343 PIR:S51630
            RefSeq:NP_005241.1 UniGene:Hs.533830 ProteinModelPortal:Q12952
            SMR:Q12952 STRING:Q12952 DMDM:13638268 PRIDE:Q12952
            Ensembl:ENST00000320241 GeneID:2300 KEGG:hsa:2300 UCSC:uc002fjr.3
            CTD:2300 GeneCards:GC16P086612 HGNC:HGNC:3817 MIM:603252
            neXtProt:NX_Q12952 PharmGKB:PA28234 HOGENOM:HOG000112632
            HOVERGEN:HBG051650 InParanoid:Q12952 KO:K09405 OMA:PFLSYFP
            PhylomeDB:Q12952 GenomeRNAi:2300 NextBio:9337 Bgee:Q12952
            CleanEx:HS_FOXL1 Genevestigator:Q12952 GermOnline:ENSG00000176678
            GO:GO:0007495 Uniprot:Q12952
        Length = 345

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 66/104 (63%), Positives = 81/104 (77%)

Query:   117 RSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLS 176
             R+ T  KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY  N+Q WQNSIRH+LS
Sbjct:    43 RAETPQKPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLS 102

Query:   177 FNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
              NDCFVKVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   103 LNDCFVKVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146


>UNIPROTKB|E2QUB0 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030 CTD:2294
            KO:K09399 OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371
            GO:GO:0090131 GO:GO:0060461 GO:GO:0072189 EMBL:AAEX03003995
            RefSeq:XP_546792.2 ProteinModelPortal:E2QUB0
            Ensembl:ENSCAFT00000031689 GeneID:489672 KEGG:cfa:489672
            NextBio:20862824 Uniprot:E2QUB0
        Length = 354

 Score = 329 (120.9 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 61/112 (54%), Positives = 80/112 (71%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             A+A KT        KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FPF+R + Q W+
Sbjct:     9 AKAKKTNAGFRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWK 68

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    69 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 120

 Score = 40 (19.1 bits), Expect = 2.6e-32, Sum P(2) = 2.6e-32
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAM 322
             + M++  +HS    + YHQ    QD +   M
Sbjct:   324 NTMASSSMHSAGSGSYYHQQVTYQDIKPCVM 354


>RGD|621723 [details] [associations]
            symbol:Foxe1 "forkhead box E1 (thyroid transcription factor 2)"
            species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
            of transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0000981 "sequence-specific DNA binding RNA polymerase II
            transcription factor activity" evidence=IDA] [GO:0002089 "lens
            morphogenesis in camera-type eye" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=ISO;IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO;IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0006590 "thyroid hormone
            generation" evidence=ISO;IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IRD] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0016477 "cell migration" evidence=ISO;IBA]
            [GO:0030878 "thyroid gland development" evidence=ISO;IBA]
            [GO:0031069 "hair follicle morphogenesis" evidence=ISO;IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048484 "enteric
            nervous system development" evidence=IRD] [GO:0048485 "sympathetic
            nervous system development" evidence=IRD] [GO:0048538 "thymus
            development" evidence=IEA;ISO] [GO:0048562 "embryonic organ
            morphogenesis" evidence=ISO;IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IRD] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IRD] [GO:0051090 "regulation
            of sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060022 "hard palate development"
            evidence=ISO;IBA] [GO:0060023 "soft palate development"
            evidence=ISO;IBA] [GO:0060465 "pharynx development"
            evidence=IEA;ISO] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621723 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0000122 GO:GO:0008301
            GO:GO:0003690 GO:GO:0048538 GO:GO:0008134 EMBL:CH473962
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135
            HSSP:Q63245 CTD:2304 HOGENOM:HOG000231286 HOVERGEN:HBG051642
            KO:K09398 OMA:TGYQPAG GO:GO:0048562 EMBL:Y11321 IPI:IPI00195679
            RefSeq:NP_620264.1 UniGene:Rn.26546 SMR:O08771 STRING:O08771
            Ensembl:ENSRNOT00000012637 GeneID:192274 KEGG:rno:192274
            UCSC:RGD:621723 InParanoid:O08771 NextBio:622984
            Genevestigator:O08771 Uniprot:O08771
        Length = 370

 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 64/134 (47%), Positives = 90/134 (67%)

Query:    87 ALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTL 146
             A+   R E A  +  P  +       +  +R     KPPYSYI+LI MAI ++P + LTL
Sbjct:    18 AVKEERGEAAAGAGVPAEVAGRGAGGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTL 77

Query:   147 SEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNM 206
               IY+FI + FPFYR N ++WQNSIRH+L+ NDCF+K+PR   +PGKG++W L  ++ +M
Sbjct:    78 GGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDM 137

Query:   207 FENGCYLRRQKRFK 220
             FE+G +LRR+KRFK
Sbjct:   138 FESGSFLRRRKRFK 151


>UNIPROTKB|Q12946 [details] [associations]
            symbol:FOXF1 "Forkhead box protein F1" species:9606 "Homo
            sapiens" [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0001570 "vasculogenesis"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0007368 "determination of left/right symmetry"
            evidence=IEA] [GO:0010811 "positive regulation of cell-substrate
            adhesion" evidence=IEA] [GO:0014822 "detection of wounding"
            evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
            [GO:0030198 "extracellular matrix organization" evidence=IEA]
            [GO:0030335 "positive regulation of cell migration" evidence=IEA]
            [GO:0043305 "negative regulation of mast cell degranulation"
            evidence=IEA] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=IEA] [GO:0045198 "establishment of epithelial
            cell apical/basal polarity" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0048286 "lung alveolus development" evidence=IEA]
            [GO:0048371 "lateral mesodermal cell differentiation" evidence=IEA]
            [GO:0048617 "embryonic foregut morphogenesis" evidence=IEA]
            [GO:0050728 "negative regulation of inflammatory response"
            evidence=IEA] [GO:0051145 "smooth muscle cell differentiation"
            evidence=IEA] [GO:0051150 "regulation of smooth muscle cell
            differentiation" evidence=IEA] [GO:0060438 "trachea development"
            evidence=IEA] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IEA] [GO:0060461 "right lung
            morphogenesis" evidence=IEA] [GO:0060463 "lung lobe morphogenesis"
            evidence=IEA] [GO:0061030 "epithelial cell differentiation involved
            in mammary gland alveolus development" evidence=IEA] [GO:0071345
            "cellular response to cytokine stimulus" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0090131 "mesenchyme migration" evidence=IEA] [GO:0001763
            "morphogenesis of a branching structure" evidence=IMP] [GO:0030323
            "respiratory tube development" evidence=IMP] [GO:0001701 "in utero
            embryonic development" evidence=IMP] [GO:0060841 "venous blood
            vessel development" evidence=IMP] [GO:0001568 "blood vessel
            development" evidence=IMP] [GO:0030324 "lung development"
            evidence=IMP] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
            [GO:0060446 "branching involved in open tracheal system
            development" evidence=IMP] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IMP] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=IMP] [GO:0072001 "renal
            system development" evidence=IMP] [GO:0072189 "ureter development"
            evidence=IMP] [GO:0003197 "endocardial cushion development"
            evidence=IMP] [GO:0031016 "pancreas development" evidence=IMP]
            [GO:0007494 "midgut development" evidence=IMP] [GO:0048565
            "digestive tract development" evidence=IMP] [GO:0060426 "lung
            vasculature development" evidence=IMP] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0005634 "nucleus" evidence=IC] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045893
            GO:GO:0050728 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0030198 Gene3D:1.10.10.10 InterPro:IPR011991
            Pathway_Interaction_DB:hnf3bpathway GO:GO:0005667 GO:GO:0003705
            GO:GO:0007494 GO:GO:0000122 GO:GO:0008301 GO:GO:0001756
            GO:GO:0044212 GO:GO:0048286 GO:GO:0003690 GO:GO:0016337
            GO:GO:0060841 GO:GO:0007368 GO:GO:0051145 GO:GO:0003197
            GO:GO:0030335 GO:GO:0001570 GO:GO:0010811 GO:GO:0008134
            GO:GO:0031016 GO:GO:0007389 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0051090 GO:GO:0048617 GO:GO:0002053
            GO:GO:0051150 GO:GO:0060441 GO:GO:0045198 GO:GO:0003214
            GO:GO:0060446 GO:GO:0071345 GO:GO:0043305 eggNOG:COG5025
            GO:GO:0060426 GO:GO:0060463 GO:GO:0061030 CTD:2294
            HOGENOM:HOG000060124 KO:K09399 OMA:MTAEVQQ OrthoDB:EOG4BRWM4
            EMBL:U13219 EMBL:AF085343 EMBL:AF085342 EMBL:AK314167 EMBL:AC009108
            EMBL:BC089442 IPI:IPI00871189 PIR:S51624 RefSeq:NP_001442.2
            UniGene:Hs.155591 ProteinModelPortal:Q12946 SMR:Q12946
            STRING:Q12946 PhosphoSite:Q12946 DMDM:238054293 PaxDb:Q12946
            PRIDE:Q12946 DNASU:2294 Ensembl:ENST00000262426 GeneID:2294
            KEGG:hsa:2294 UCSC:uc002fjl.3 GeneCards:GC16P086544 HGNC:HGNC:3809
            HPA:HPA028886 MIM:265380 MIM:601089 neXtProt:NX_Q12946
            Orphanet:210122 PharmGKB:PA28226 HOVERGEN:HBG051644
            InParanoid:Q12946 GenomeRNAi:2294 NextBio:9311 Bgee:Q12946
            CleanEx:HS_FOXF1 Genevestigator:Q12946 GermOnline:ENSG00000103241
            GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 Uniprot:Q12946
        Length = 379

 Score = 326 (119.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 60/112 (53%), Positives = 80/112 (71%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             ++A KT        KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FPF+R + Q W+
Sbjct:    34 SKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWK 93

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    94 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 145

 Score = 42 (19.8 bits), Expect = 3.4e-32, Sum P(2) = 3.4e-32
 Identities = 10/31 (32%), Positives = 16/31 (51%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAM 322
             +AM++  +HS    + YHQ    QD +   M
Sbjct:   349 NAMASSSMHSAGGGSYYHQQVTYQDIKPCVM 379


>UNIPROTKB|H9L2W5 [details] [associations]
            symbol:FOXD1 "Forkhead box protein D1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0001829 "trophectodermal cell
            differentiation" evidence=IEA] [GO:0001892 "embryonic placenta
            development" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GeneTree:ENSGT00700000104135 EMBL:AADN02041744
            Ensembl:ENSGALT00000036037 OMA:SSICEFI Uniprot:H9L2W5
        Length = 104

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 64/98 (65%), Positives = 77/98 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:     6 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 65

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK
Sbjct:    66 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFK 103


>MGI|MGI:1353569 [details] [associations]
            symbol:Foxe3 "forkhead box E3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001654 "eye development"
            evidence=IMP] [GO:0002089 "lens morphogenesis in camera-type eye"
            evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=ISO;IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=ISO] [GO:0006590 "thyroid hormone generation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IBA] [GO:0030878 "thyroid
            gland development" evidence=IBA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048468 "cell development" evidence=IMP] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048562 "embryonic
            organ morphogenesis" evidence=IBA] [GO:0050679 "positive regulation
            of epithelial cell proliferation" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0060022 "hard palate development"
            evidence=IBA] [GO:0060023 "soft palate development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1353569 GO:GO:0016477 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048468 GO:GO:0048484
            GO:GO:0051090 GO:GO:0031069 GO:GO:0050679 GO:GO:0006590
            GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025 GO:GO:0060022
            GO:GO:0030878 GeneTree:ENSGT00700000104135 HOGENOM:HOG000231286
            HOVERGEN:HBG051642 KO:K09398 GO:GO:0048562 CTD:2301 OMA:FPYAPFP
            OrthoDB:EOG4001JR EMBL:AF142647 IPI:IPI00135416 RefSeq:NP_056573.1
            UniGene:Mm.377122 ProteinModelPortal:Q9QY14 SMR:Q9QY14
            STRING:Q9QY14 PhosphoSite:Q9QY14 PRIDE:Q9QY14
            Ensembl:ENSMUST00000050940 GeneID:30923 KEGG:mmu:30923
            InParanoid:Q9QY14 NextBio:307312 Bgee:Q9QY14 CleanEx:MM_FOXE3
            Genevestigator:Q9QY14 GermOnline:ENSMUSG00000044518 Uniprot:Q9QY14
        Length = 288

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 62/108 (57%), Positives = 82/108 (75%)

Query:   113 KTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIR 172
             K  RR     KPPYSYI+LI MA+ ++P + LTL+ IY+FI + F FYR + ++WQNSIR
Sbjct:    54 KRRRRPLQRGKPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIR 113

Query:   173 HSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             H+L+ NDCFVKVPR P  PGKG++WTL   + +MF+NG +LRR+KRFK
Sbjct:   114 HNLTLNDCFVKVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFK 161


>RGD|621715 [details] [associations]
            symbol:Foxd3 "forkhead box D3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS] [GO:0000790 "nuclear
            chromatin" evidence=ISO] [GO:0000977 "RNA polymerase II regulatory
            region sequence-specific DNA binding" evidence=ISO] [GO:0001227
            "RNA polymerase II transcription regulatory region
            sequence-specific DNA binding transcription factor activity
            involved in negative regulation of transcription" evidence=ISO]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0001701 "in utero embryonic development"
            evidence=ISO;ISS] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001829 "trophectodermal cell differentiation"
            evidence=ISO;IBA] [GO:0001892 "embryonic placenta development"
            evidence=ISO;IBA] [GO:0003677 "DNA binding" evidence=IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IMP] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;ISS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;ISS;IBA] [GO:0048484 "enteric
            nervous system development" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0048937
            "lateral line nerve glial cell development" evidence=IBA]
            [GO:0050935 "iridophore differentiation" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 64/98 (65%), Positives = 77/98 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:     3 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK
Sbjct:    63 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFK 100


>UNIPROTKB|Q63245 [details] [associations]
            symbol:Foxd3 "Forkhead box protein D3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621715 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0001822 GO:GO:0003690 GO:GO:0051216 GO:GO:0001829
            GO:GO:0008134 GO:GO:0007389 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0001892 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:L13202 IPI:IPI00765696 PIR:I60917
            UniGene:Rn.92964 PDB:2HDC PDB:2HFH PDBsum:2HDC PDBsum:2HFH
            ProteinModelPortal:Q63245 SMR:Q63245 STRING:Q63245
            PhosphoSite:Q63245 UCSC:RGD:621715 HOVERGEN:HBG083674
            InParanoid:Q63245 EvolutionaryTrace:Q63245 ArrayExpress:Q63245
            Genevestigator:Q63245 GermOnline:ENSRNOG00000009021 Uniprot:Q63245
        Length = 101

 Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
 Identities = 64/98 (65%), Positives = 77/98 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I +FI + FP+YR+    WQNSIRH+LS NDCFV
Sbjct:     3 KPPYSYIALITMAILQSPQKKLTLSGICEFISNRFPYYREKFPAWQNSIRHNLSLNDCFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK
Sbjct:    63 KIPREPGNPGKGNYWTLDPQSEDMFDNGSFLRRRKRFK 100


>UNIPROTKB|Q9PRJ8 [details] [associations]
            symbol:foxd5-a "Forkhead box protein D5-A" species:8355
            "Xenopus laevis" [GO:0001840 "neural plate development"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=NAS;IDA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0007399
            GO:GO:0030154 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0009953
            GO:GO:0001840 HSSP:Q63245 HOVERGEN:HBG051641 EMBL:AJ242676
            EMBL:AF162782 EMBL:AJ850135 RefSeq:NP_001081998.1 UniGene:Xl.642
            ProteinModelPortal:Q9PRJ8 SMR:Q9PRJ8 GeneID:398170 KEGG:xla:398170
            CTD:398170 Xenbase:XB-GENE-865254 Uniprot:Q9PRJ8
        Length = 352

 Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
 Identities = 85/205 (41%), Positives = 115/205 (56%)

Query:    28 SCSPQSGSTGTP--LGGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACMGGINSYN 85
             S S +SG+   P    G S     +  I G + P C S  S  Y    ++  MG     +
Sbjct:     2 SFSQESGAHHHPQDYAGLSDEEDEI-DILGEDDP-C-SLKSHFYLQPTHSV-MGDSEMLS 57

Query:    86 TA-LTTGRAELAENSPSPGALQRVARADKTYRRSY-THAKPPYSYISLITMAIQNSPTKM 143
              + L+   +E   +  S G   + +    T  ++  T  KPPYSYI+LITMAI  SP K 
Sbjct:    58 PSKLSCTESESDSSGESEGGTSKDSSTTPTGSKAKRTLVKPPYSYIALITMAILQSPHKK 117

Query:   144 LTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDS 203
             LTLS I  FI   FP+Y+     WQNSIRH+LS NDCF+K+PR P  PGKG++WTL   S
Sbjct:   118 LTLSGICDFISSKFPYYKDKFPAWQNSIRHNLSLNDCFIKIPREPGNPGKGNYWTLDPAS 177

Query:   204 GNMFENGCYLRRQKRFKDDKKEVIR 228
              +MF+NG +LRR+KRFK  ++E  +
Sbjct:   178 EDMFDNGSFLRRRKRFKRHQQEFFK 202


>UNIPROTKB|F1S6I8 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 KO:K09405 OMA:PFLSYFP EMBL:FP102684
            RefSeq:XP_003126859.1 Ensembl:ENSSSCT00000002949 GeneID:100511634
            KEGG:ssc:100511634 Uniprot:F1S6I8
        Length = 338

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 65/98 (66%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ++P + +TLS IYQFIMD FPFY  N+Q WQNSIRH+LS NDCFV
Sbjct:    49 KPPYSYIALIAMAIQDAPGQRVTLSGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFV 108

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146


>ZFIN|ZDB-GENE-040426-1181 [details] [associations]
            symbol:foxl1 "forkhead box L1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0009887 "organ
            morphogenesis" evidence=IBA] [GO:0030166 "proteoglycan biosynthetic
            process" evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0030111 "regulation of
            Wnt receptor signaling pathway" evidence=IBA] [GO:0007495 "visceral
            mesoderm-endoderm interaction involved in midgut development"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0007420 "brain development"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=IMP] [GO:0051216 "cartilage development" evidence=IMP]
            [GO:0035138 "pectoral fin morphogenesis" evidence=IMP] [GO:0005634
            "nucleus" evidence=IEA;IC] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-040426-1181
            GO:GO:0045892 GO:GO:0007420 GO:GO:0030111 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0043010 GO:GO:0009790 GO:GO:0009887
            GO:GO:0003690 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0030166 HSSP:Q99958 CTD:2300
            HOGENOM:HOG000112632 HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495
            GO:GO:0035138 EMBL:BC055156 IPI:IPI00495121 RefSeq:NP_957278.1
            UniGene:Dr.15390 ProteinModelPortal:Q7SY22 SMR:Q7SY22 STRING:Q7SY22
            GeneID:393959 KEGG:dre:393959 InParanoid:Q7SY22 NextBio:20814930
            ArrayExpress:Q7SY22 Bgee:Q7SY22 Uniprot:Q7SY22
        Length = 363

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 63/96 (65%), Positives = 76/96 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAI+N+P K  TLS IYQFIMD FP+Y  N+Q WQNSIRH+LS NDCF+
Sbjct:    52 KPPYSYIALIAMAIKNAPDKRATLSGIYQFIMDRFPYYHDNKQGWQNSIRHNLSLNDCFI 111

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR   +PGKGS+WTL     +MFENG Y RR+++
Sbjct:   112 KVPREKGRPGKGSYWTLDTKCLDMFENGNYRRRKRK 147


>ZFIN|ZDB-GENE-070410-88 [details] [associations]
            symbol:zgc:162612 "zgc:162612" species:7955 "Danio
            rerio" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-070410-88 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 HOGENOM:HOG000231285 EMBL:FP016243
            EMBL:BC135031 IPI:IPI00846054 RefSeq:NP_001082957.1
            UniGene:Dr.87458 SMR:A4IGC7 Ensembl:ENSDART00000113780
            GeneID:100037333 KEGG:dre:100037333 OMA:SDMFENG NextBio:20788507
            Uniprot:A4IGC7
        Length = 308

 Score = 350 (128.3 bits), Expect = 6.0e-32, P = 6.0e-32
 Identities = 65/98 (66%), Positives = 76/98 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLSEI  FI   F +YR+    WQNSIRH+LS NDCFV
Sbjct:    64 KPPYSYIALITMAILQSPKKRLTLSEICDFISHRFVYYREKFPAWQNSIRHNLSLNDCFV 123

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++WTL  +S +MFENG +LRR+KRFK
Sbjct:   124 KMPREPGNPGKGNYWTLDPNSSDMFENGSFLRRRKRFK 161


>ZFIN|ZDB-GENE-050419-153 [details] [associations]
            symbol:foxf1 "forkhead box F1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-050419-153 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5025
            GeneTree:ENSGT00690000101636 EMBL:BX571798 EMBL:BC129194
            IPI:IPI00487605 RefSeq:NP_001073655.1 UniGene:Dr.89399
            ProteinModelPortal:A1L1S5 SMR:A1L1S5 STRING:A1L1S5
            Ensembl:ENSDART00000012374 GeneID:566407 KEGG:dre:566407 CTD:2294
            HOGENOM:HOG000060124 InParanoid:A1L1S5 KO:K09399 OMA:MTAEVQQ
            OrthoDB:EOG4BRWM4 NextBio:20888166 Bgee:A1L1S5 Uniprot:A1L1S5
        Length = 380

 Score = 325 (119.5 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 60/111 (54%), Positives = 79/111 (71%)

Query:   110 RADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQN 169
             +A KT        KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FPF+R + Q W+N
Sbjct:    39 KAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKN 98

Query:   170 SIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             S+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    99 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 149

 Score = 40 (19.1 bits), Expect = 6.9e-32, Sum P(2) = 6.9e-32
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDS 317
             +AM++  +HS    + YH   HQQ S
Sbjct:   349 NAMTSSSMHSPGSSSYYH---HQQVS 371


>UNIPROTKB|F1MBH4 [details] [associations]
            symbol:FOXF1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090131 "mesenchyme migration" evidence=IEA]
            [GO:0072189 "ureter development" evidence=IEA] [GO:0071407
            "cellular response to organic cyclic compound" evidence=IEA]
            [GO:0071345 "cellular response to cytokine stimulus" evidence=IEA]
            [GO:0061030 "epithelial cell differentiation involved in mammary
            gland alveolus development" evidence=IEA] [GO:0060841 "venous blood
            vessel development" evidence=IEA] [GO:0060463 "lung lobe
            morphogenesis" evidence=IEA] [GO:0060461 "right lung morphogenesis"
            evidence=IEA] [GO:0060446 "branching involved in open tracheal
            system development" evidence=IEA] [GO:0060441 "epithelial tube
            branching involved in lung morphogenesis" evidence=IEA] [GO:0060438
            "trachea development" evidence=IEA] [GO:0060426 "lung vasculature
            development" evidence=IEA] [GO:0051150 "regulation of smooth muscle
            cell differentiation" evidence=IEA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IEA] [GO:0050728 "negative regulation of
            inflammatory response" evidence=IEA] [GO:0048617 "embryonic foregut
            morphogenesis" evidence=IEA] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=IEA] [GO:0048371 "lateral
            mesodermal cell differentiation" evidence=IEA] [GO:0048286 "lung
            alveolus development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045198 "establishment of epithelial cell
            apical/basal polarity" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043305 "negative
            regulation of mast cell degranulation" evidence=IEA] [GO:0031016
            "pancreas development" evidence=IEA] [GO:0030335 "positive
            regulation of cell migration" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0016337
            "cell-cell adhesion" evidence=IEA] [GO:0014822 "detection of
            wounding" evidence=IEA] [GO:0010811 "positive regulation of
            cell-substrate adhesion" evidence=IEA] [GO:0007494 "midgut
            development" evidence=IEA] [GO:0007368 "determination of left/right
            symmetry" evidence=IEA] [GO:0007224 "smoothened signaling pathway"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003214
            "cardiac left ventricle morphogenesis" evidence=IEA] [GO:0003197
            "endocardial cushion development" evidence=IEA] [GO:0002053
            "positive regulation of mesenchymal cell proliferation"
            evidence=IEA] [GO:0001756 "somitogenesis" evidence=IEA] [GO:0001701
            "in utero embryonic development" evidence=IEA] [GO:0001570
            "vasculogenesis" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0050728
            GO:GO:0043565 GO:GO:0001701 GO:GO:0045944 GO:GO:0030198
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0007494 GO:GO:0000122 GO:GO:0001756 GO:GO:0044212
            GO:GO:0048286 GO:GO:0016337 GO:GO:0060841 GO:GO:0007368
            GO:GO:0051145 GO:GO:0003197 GO:GO:0030335 GO:GO:0001570
            GO:GO:0010811 GO:GO:0031016 GO:GO:0071407 GO:GO:0060438
            GO:GO:0007224 GO:GO:0048617 GO:GO:0002053 GO:GO:0051150
            GO:GO:0060441 GO:GO:0045198 GO:GO:0003214 GO:GO:0060446
            GO:GO:0071345 GO:GO:0043305 GO:GO:0060426
            GeneTree:ENSGT00690000101636 GO:GO:0060463 GO:GO:0061030
            OMA:MTAEVQQ GO:GO:0014822 GO:GO:0048613 GO:GO:0048371 GO:GO:0090131
            GO:GO:0060461 GO:GO:0072189 EMBL:DAAA02046218 IPI:IPI00692837
            Ensembl:ENSBTAT00000000009 Uniprot:F1MBH4
        Length = 415

 Score = 326 (119.8 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 60/112 (53%), Positives = 80/112 (71%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             ++A KT        KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FPF+R + Q W+
Sbjct:    70 SKAKKTNAGIRRPEKPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWK 129

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   130 NSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 181

 Score = 38 (18.4 bits), Expect = 8.8e-32, Sum P(2) = 8.8e-32
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAM 322
             + M++  +HS    + YHQ    QD +   M
Sbjct:   385 NTMASSSMHSAGGGSYYHQQVTYQDIKPCVM 415


>UNIPROTKB|F1ME43 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0007507 "heart development" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:DAAA02046218 IPI:IPI00710921 RefSeq:XP_002694802.1
            RefSeq:XP_583889.1 Ensembl:ENSBTAT00000053216 GeneID:538955
            KEGG:bta:538955 NextBio:20877688 Uniprot:F1ME43
        Length = 346

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 64/98 (65%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY  N+Q WQNSIRH+LS NDCFV
Sbjct:    49 KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNDCFV 108

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146


>UNIPROTKB|F1MFD4 [details] [associations]
            symbol:FOXS1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0050885 "neuromuscular process controlling balance"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0001568 "blood vessel development" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
            GO:GO:0050885 GO:GO:0040018 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0043433 GO:GO:0001568
            GeneTree:ENSGT00690000101636 OMA:KEPWVAG EMBL:DAAA02036394
            IPI:IPI00687948 UniGene:Bt.24663 Ensembl:ENSBTAT00000012128
            Uniprot:F1MFD4
        Length = 330

 Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
 Identities = 64/97 (65%), Positives = 77/97 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQNSP +  TLS IY++IM  F FYR N+  WQNSIRH+LS N+CFV
Sbjct:    18 KPPYSYIALIAMAIQNSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF 219
             KVPR   KPGKGS+WTL  D  +MFE+G +LRR++RF
Sbjct:    78 KVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRF 114


>UNIPROTKB|Q28BS5 [details] [associations]
            symbol:foxf1 "Forkhead box protein F1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003677 "DNA binding"
            evidence=ISS] [GO:0008283 "cell proliferation" evidence=ISS]
            [GO:0030509 "BMP signaling pathway" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0048566 "embryonic digestive tract development" evidence=ISS]
            [GO:0048745 "smooth muscle tissue development" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0030154 GO:GO:0003677
            GO:GO:0008283 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0030509 GO:GO:0048566
            eggNOG:COG5025 GO:GO:0048745 CTD:2294 HOGENOM:HOG000060124
            KO:K09399 HOVERGEN:HBG051644 EMBL:CR942666 RefSeq:NP_001039226.1
            UniGene:Str.13214 HSSP:Q01167 ProteinModelPortal:Q28BS5 SMR:Q28BS5
            STRING:Q28BS5 GeneID:734087 KEGG:xtr:734087 Xenbase:XB-GENE-478922
            Uniprot:Q28BS5
        Length = 373

 Score = 323 (118.8 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 57/98 (58%), Positives = 75/98 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SPTK LTLSEIYQF+   FPF+R + Q W+NS+RH+LS N+CF+
Sbjct:    54 KPPYSYIALIVMAIQSSPTKRLTLSEIYQFLQSRFPFFRGSYQGWKNSVRHNLSLNECFI 113

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   114 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 151

 Score = 40 (19.1 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
 Identities = 9/26 (34%), Positives = 13/26 (50%)

Query:   294 MSAGLLHSDFQQNSYHQSFHQQDSEL 319
             +S+ L      Q+  HQ+ H   SEL
Sbjct:   295 LSSSLSSHSLDQSYLHQNSHNTASEL 320


>UNIPROTKB|F1SSG9 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 KO:K09398 OMA:TGYQPAG GO:GO:0048562
            EMBL:CU234153 RefSeq:XP_001925267.1 UniGene:Ssc.95528
            Ensembl:ENSSSCT00000005909 GeneID:100157892 KEGG:ssc:100157892
            Uniprot:F1SSG9
        Length = 373

 Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
 Identities = 66/134 (49%), Positives = 91/134 (67%)

Query:    87 ALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTL 146
             A+   R E     P+  A  R A   +  +R     KPPYSYI+LI MAI ++P + LTL
Sbjct:    20 AVKQERGEAGAGVPAEAA-GRGA-GGRRRKRPLQRGKPPYSYIALIAMAIAHAPERRLTL 77

Query:   147 SEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNM 206
               IY+FI + FPFYR N ++WQNSIRH+L+ NDCF+K+PR   +PGKG++W L  ++ +M
Sbjct:    78 GGIYKFITERFPFYRDNPKKWQNSIRHNLTLNDCFLKIPREAGRPGKGNYWALDPNAEDM 137

Query:   207 FENGCYLRRQKRFK 220
             FE+G +LRR+KRFK
Sbjct:   138 FESGSFLRRRKRFK 151


>UNIPROTKB|E1BTF1 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            EMBL:AADN02064408 IPI:IPI00814490 Ensembl:ENSGALT00000039026
            Uniprot:E1BTF1
        Length = 278

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 64/98 (65%), Positives = 77/98 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAI+ +P + +TLS IYQFIMD FPFY  N+Q WQNSIRH+LS NDCFV
Sbjct:    40 KPPYSYIALIAMAIKEAPEQKVTLSGIYQFIMDRFPFYHDNKQGWQNSIRHNLSLNDCFV 99

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   100 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 137


>UNIPROTKB|F1P6E0 [details] [associations]
            symbol:FOXE3 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:FPYAPFP EMBL:AAEX03009757
            EMBL:AAEX03009758 Ensembl:ENSCAFT00000006444 Uniprot:F1P6E0
        Length = 278

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 60/98 (61%), Positives = 79/98 (80%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MA+ ++P + LTL+ IY+FI + F FYR + ++WQNSIRH+L+ NDCFV
Sbjct:    24 KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFV 83

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR P  PGKG++WTL   + +MFENG +LRR+KRFK
Sbjct:    84 KVPREPGNPGKGNYWTLDPAAADMFENGSFLRRRKRFK 121


>WB|WBGene00006853 [details] [associations]
            symbol:unc-130 species:6239 "Caenorhabditis elegans"
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA;ISS] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0009792 "embryo
            development ending in birth or egg hatching" evidence=IMP]
            [GO:0009790 "embryo development" evidence=IMP] [GO:0007399 "nervous
            system development" evidence=IMP] [GO:0045138 "tail tip
            morphogenesis" evidence=IMP] [GO:0048846 "axon extension involved
            in axon guidance" evidence=IMP] [GO:0045185 "maintenance of protein
            location" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0001106 "RNA polymerase
            II transcription corepressor activity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0009792
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0045138
            GO:GO:0001106 GO:GO:0048485 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 GO:GO:0045185 eggNOG:COG5025 GO:GO:0009888
            EMBL:Z49125 GeneTree:ENSGT00700000104135 GO:GO:0048937 HSSP:Q63245
            PIR:T20033 RefSeq:NP_496411.1 ProteinModelPortal:Q18694 SMR:Q18694
            IntAct:Q18694 STRING:Q18694 PaxDb:Q18694 EnsemblMetazoa:C47G2.2
            GeneID:174721 KEGG:cel:CELE_C47G2.2 UCSC:C47G2.2 CTD:174721
            WormBase:C47G2.2 HOGENOM:HOG000016824 InParanoid:Q18694 OMA:MLFSMES
            NextBio:885208 Uniprot:Q18694
        Length = 333

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 63/112 (56%), Positives = 83/112 (74%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             +R   +  R  +HAKPPYSYI+LI M+I NSP K LTLSEI +FI++ F +Y++    WQ
Sbjct:   113 SRKSMSGHRKSSHAKPPYSYIALIAMSILNSPEKKLTLSEICEFIINKFEYYKEKFPAWQ 172

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NSIRH+LS NDCFVKV R P  PGKG++W L  +  +MF+NG +LRR+KR+K
Sbjct:   173 NSIRHNLSLNDCFVKVARGPGNPGKGNYWALDPNCEDMFDNGSFLRRRKRYK 224


>UNIPROTKB|Q18694 [details] [associations]
            symbol:unc-130 "Protein UNC-130" species:6239
            "Caenorhabditis elegans" [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0045138 GO:GO:0001106 GO:GO:0048485 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 GO:GO:0045185 eggNOG:COG5025
            GO:GO:0009888 EMBL:Z49125 GeneTree:ENSGT00700000104135
            GO:GO:0048937 HSSP:Q63245 PIR:T20033 RefSeq:NP_496411.1
            ProteinModelPortal:Q18694 SMR:Q18694 IntAct:Q18694 STRING:Q18694
            PaxDb:Q18694 EnsemblMetazoa:C47G2.2 GeneID:174721
            KEGG:cel:CELE_C47G2.2 UCSC:C47G2.2 CTD:174721 WormBase:C47G2.2
            HOGENOM:HOG000016824 InParanoid:Q18694 OMA:MLFSMES NextBio:885208
            Uniprot:Q18694
        Length = 333

 Score = 346 (126.9 bits), Expect = 1.6e-31, P = 1.6e-31
 Identities = 63/112 (56%), Positives = 83/112 (74%)

Query:   109 ARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQ 168
             +R   +  R  +HAKPPYSYI+LI M+I NSP K LTLSEI +FI++ F +Y++    WQ
Sbjct:   113 SRKSMSGHRKSSHAKPPYSYIALIAMSILNSPEKKLTLSEICEFIINKFEYYKEKFPAWQ 172

Query:   169 NSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             NSIRH+LS NDCFVKV R P  PGKG++W L  +  +MF+NG +LRR+KR+K
Sbjct:   173 NSIRHNLSLNDCFVKVARGPGNPGKGNYWALDPNCEDMFDNGSFLRRRKRYK 224


>UNIPROTKB|F1ME54 [details] [associations]
            symbol:FOXE1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0060465 "pharynx development" evidence=IEA] [GO:0060023
            "soft palate development" evidence=IEA] [GO:0060022 "hard palate
            development" evidence=IEA] [GO:0048562 "embryonic organ
            morphogenesis" evidence=IEA] [GO:0048538 "thymus development"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IEA] [GO:0030878 "thyroid gland
            development" evidence=IEA] [GO:0016477 "cell migration"
            evidence=IEA] [GO:0006590 "thyroid hormone generation"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0016477
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048538 GO:GO:0060465 GO:GO:0031069
            GO:GO:0006590 GO:GO:0060023 GO:GO:0060022 GO:GO:0030878
            GeneTree:ENSGT00700000104135 CTD:2304 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:DAAA02023246 IPI:IPI00702358
            RefSeq:XP_002689770.1 RefSeq:XP_873930.3 UniGene:Bt.87684
            Ensembl:ENSBTAT00000019638 GeneID:616734 KEGG:bta:616734
            NextBio:20900290 Uniprot:F1ME54
        Length = 373

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +R     KPPYSYI+LI MAI ++P + LTL  IY+FI + FPFYR N ++WQNSIRH+L
Sbjct:    47 KRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNL 106

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             + NDCF+K+PR   +PGKG++W L  ++ +MFE+G +LRR+KRFK
Sbjct:   107 TLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK 151


>UNIPROTKB|Q5WM45 [details] [associations]
            symbol:foxd5 "Forkhead box protein D5" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0001658 "branching involved in
            ureteric bud morphogenesis" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0001822 "kidney development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=ISS] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045892
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0001658
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937 HSSP:Q63245
            HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0050935
            HOGENOM:HOG000231285 EMBL:AJ850137 EMBL:CR762235
            RefSeq:NP_001016928.1 UniGene:Str.10716 ProteinModelPortal:Q5WM45
            SMR:Q5WM45 STRING:Q5WM45 GeneID:549682 KEGG:xtr:549682 CTD:549682
            Xenbase:XB-GENE-479247 InParanoid:Q5WM45 Uniprot:Q5WM45
        Length = 352

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 63/106 (59%), Positives = 78/106 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I  FI   FP+Y+     WQNSIRH+LS NDCF+
Sbjct:    97 KPPYSYIALITMAILQSPHKKLTLSGICDFISSKFPYYKDKFPAWQNSIRHNLSLNDCFI 156

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E  +
Sbjct:   157 KIPREPGNPGKGNYWTLDPASEDMFDNGSFLRRRKRFKRHQQEFFK 202


>UNIPROTKB|Q9PT68 [details] [associations]
            symbol:foxd5-b "Forkhead box protein D5-B" species:8355
            "Xenopus laevis" [GO:0001840 "neural plate development"
            evidence=IEP] [GO:0003677 "DNA binding" evidence=NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 EMBL:AF223426 GO:GO:0005634 GO:GO:0045892
            GO:GO:0007399 GO:GO:0030154 GO:GO:0003677 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0001840 KO:K09397 HSSP:Q63245 HOVERGEN:HBG051641
            EMBL:AJ242677 EMBL:AJ850136 EMBL:U04872 PIR:S50124
            RefSeq:NP_001081722.1 RefSeq:NP_001091898.1 UniGene:Xl.34925
            UniGene:Xl.644 ProteinModelPortal:Q9PT68 SMR:Q9PT68 GeneID:394316
            GeneID:398016 KEGG:xla:394316 KEGG:xla:398016 CTD:394316 CTD:398016
            Xenbase:XB-GENE-6252054 Uniprot:Q9PT68
        Length = 353

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 63/106 (59%), Positives = 78/106 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I  FI   FP+Y+     WQNSIRH+LS NDCF+
Sbjct:    97 KPPYSYIALITMAILQSPHKKLTLSGICDFISSKFPYYKDKFPAWQNSIRHNLSLNDCFI 156

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK  ++E  +
Sbjct:   157 KIPREPGNPGKGNYWTLDPASEDMFDNGSFLRRRKRFKRHQQEFFK 202


>MGI|MGI:1353500 [details] [associations]
            symbol:Foxe1 "forkhead box E1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0000981
            "sequence-specific DNA binding RNA polymerase II transcription
            factor activity" evidence=ISO] [GO:0002089 "lens morphogenesis in
            camera-type eye" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=ISO;IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
            polymerase II promoter" evidence=ISO] [GO:0006590 "thyroid hormone
            generation" evidence=IMP] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IMP] [GO:0030878 "thyroid
            gland development" evidence=ISO;IMP] [GO:0031069 "hair follicle
            morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISO] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048562 "embryonic organ morphogenesis"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060022
            "hard palate development" evidence=ISO;IBA] [GO:0060023 "soft
            palate development" evidence=ISO;IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1353500
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0000122
            GO:GO:0008301 GO:GO:0003690 GO:GO:0048538 GO:GO:0008134
            GO:GO:0007389 GO:GO:0060465 GO:GO:0051090 GO:GO:0031069
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 GeneTree:ENSGT00700000104135 CTD:2304
            HOGENOM:HOG000231286 HOVERGEN:HBG051642 KO:K09398 OMA:TGYQPAG
            GO:GO:0048562 EMBL:AJ457047 EMBL:AL806523 IPI:IPI00153583
            RefSeq:NP_899121.1 UniGene:Mm.354634 ProteinModelPortal:Q8R2I0
            SMR:Q8R2I0 STRING:Q8R2I0 PhosphoSite:Q8R2I0 PRIDE:Q8R2I0
            DNASU:110805 Ensembl:ENSMUST00000095097 GeneID:110805
            KEGG:mmu:110805 UCSC:uc008sto.1 InParanoid:A2AM00 NextBio:364693
            Bgee:Q8R2I0 CleanEx:MM_FOXE1 Genevestigator:Q8R2I0 Uniprot:Q8R2I0
        Length = 371

 Score = 345 (126.5 bits), Expect = 2.0e-31, P = 2.0e-31
 Identities = 59/105 (56%), Positives = 81/105 (77%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +R     KPPYSYI+LI MAI ++P + LTL  IY+FI + FPFYR N ++WQNSIRH+L
Sbjct:    48 KRPLQRGKPPYSYIALIAMAIAHAPERRLTLGGIYKFITERFPFYRDNPKKWQNSIRHNL 107

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             + NDCF+K+PR   +PGKG++W L  ++ +MFE+G +LRR+KRFK
Sbjct:   108 TLNDCFLKIPREAGRPGKGNYWALDPNAEDMFESGSFLRRRKRFK 152


>UNIPROTKB|E2QSH5 [details] [associations]
            symbol:FOXL1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007507 "heart development" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0007507 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 CTD:2300 KO:K09405 OMA:PFLSYFP
            EMBL:AAEX03003995 RefSeq:XP_851625.1 Ensembl:ENSCAFT00000031682
            GeneID:609291 KEGG:cfa:609291 NextBio:20894896 Uniprot:E2QSH5
        Length = 356

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 63/98 (64%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY  N+Q WQNSIRH+LS N+CFV
Sbjct:    49 KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECFV 108

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146


>UNIPROTKB|Q9PT67 [details] [associations]
            symbol:foxd5-c "Forkhead box protein D5-C" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0045892
            GO:GO:0003677 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HSSP:Q63245 HOVERGEN:HBG051641
            EMBL:AJ242678 RefSeq:NP_001079097.1 UniGene:Xl.247
            ProteinModelPortal:Q9PT67 SMR:Q9PT67 GeneID:373630 KEGG:xla:373630
            CTD:373630 Xenbase:XB-GENE-6252884 Uniprot:Q9PT67
        Length = 342

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 62/106 (58%), Positives = 78/106 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LIT+AI  SP K LTLS I  FI   FP+Y+     WQNSIRH+LS NDCF+
Sbjct:    97 KPPYSYIALITIAIMQSPHKKLTLSGICDFISSKFPYYKDKFPAWQNSIRHNLSLNDCFI 156

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVIR 228
             K+PR P  PGKG++WTL   S +MF+NG +LRR+KRFK   +E+ +
Sbjct:   157 KIPREPGNPGKGNYWTLDPASKDMFDNGSFLRRRKRFKRQHQELFK 202


>MGI|MGI:1347469 [details] [associations]
            symbol:Foxl1 "forkhead box L1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=ISO] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=TAS] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007420 "brain development"
            evidence=IBA] [GO:0007495 "visceral mesoderm-endoderm interaction
            involved in midgut development" evidence=IMP] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009887 "organ morphogenesis" evidence=IBA] [GO:0030111
            "regulation of Wnt receptor signaling pathway" evidence=IMP]
            [GO:0030166 "proteoglycan biosynthetic process" evidence=IMP]
            [GO:0035136 "forelimb morphogenesis" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051216 "cartilage development"
            evidence=IBA] [GO:0061146 "Peyer's patch morphogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1347469 GO:GO:0007420 GO:GO:0030111
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0043010
            GO:GO:0009790 GO:GO:0009887 GO:GO:0003690 GO:GO:0051216
            GO:GO:0008134 EMBL:CH466525 GO:GO:0007389 GO:GO:0035136
            GO:GO:0061146 GO:GO:0051090 GO:GO:0030166 CTD:2300
            HOVERGEN:HBG051650 KO:K09405 GO:GO:0007495 EMBL:X92498
            EMBL:BC137805 EMBL:BC137806 EMBL:X71944 IPI:IPI00138057 PIR:F47746
            RefSeq:NP_032050.2 UniGene:Mm.5111 ProteinModelPortal:Q64731
            IntAct:Q64731 PRIDE:Q64731 GeneID:14241 KEGG:mmu:14241
            NextBio:285543 CleanEx:MM_FOXL1 Genevestigator:Q64731
            Uniprot:Q64731
        Length = 336

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 63/98 (64%), Positives = 78/98 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ++P + +TL+ IYQFIMD FPFY  N+Q WQNSIRH+LS N+CFV
Sbjct:    49 KPPYSYIALIAMAIQDAPEQRVTLNGIYQFIMDRFPFYHDNRQGWQNSIRHNLSLNECFV 108

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR   +PGKGS+WTL     +MFENG Y RR+++ K
Sbjct:   109 KVPREKGRPGKGSYWTLDPRCLDMFENGNYRRRKRKPK 146


>ZFIN|ZDB-GENE-980605-4 [details] [associations]
            symbol:foxd5 "forkhead box D5" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IBA] [GO:0050935
            "iridophore differentiation" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0001822 "kidney development" evidence=IBA]
            [GO:0001658 "branching involved in ureteric bud morphogenesis"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0051216 "cartilage development" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0032525
            "somite rostral/caudal axis specification" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-980605-4 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001822 GO:GO:0003690
            GO:GO:0051216 GO:GO:0008134 GO:GO:0001658 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0048846
            GO:GO:0032525 GO:GO:0048937 HOVERGEN:HBG051641 GO:GO:0050935
            EMBL:BC097095 IPI:IPI00481008 UniGene:Dr.75818
            ProteinModelPortal:Q4QRE5 SMR:Q4QRE5 STRING:Q4QRE5
            InParanoid:Q4QRE5 ArrayExpress:Q4QRE5 Uniprot:Q4QRE5
        Length = 321

 Score = 344 (126.2 bits), Expect = 2.6e-31, P = 2.6e-31
 Identities = 62/103 (60%), Positives = 79/103 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I  FI + FP+Y++    WQNSIRH+LS NDCF+
Sbjct:    73 KPPYSYIALITMAILQSPMKKLTLSGICDFISNKFPYYKEKFPAWQNSIRHNLSLNDCFI 132

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             K+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK ++ E
Sbjct:   133 KIPREPGNPGKGNYWSLDPASEDMFDNGSFLRRRKRFKRNQPE 175


>UNIPROTKB|O43638 [details] [associations]
            symbol:FOXS1 "Forkhead box protein S1" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=TAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0007275 "multicellular organismal development"
            evidence=NAS] [GO:0001503 "ossification" evidence=IBA] [GO:0001569
            "patterning of blood vessels" evidence=IBA] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001656 "metanephros
            development" evidence=IRD] [GO:0001657 "ureteric bud development"
            evidence=IRD] [GO:0001756 "somitogenesis" evidence=IBA] [GO:0001946
            "lymphangiogenesis" evidence=IBA] [GO:0001974 "blood vessel
            remodeling" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008286 "insulin receptor signaling pathway" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0014034
            "neural crest cell fate commitment" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0031490 "chromatin
            DNA binding" evidence=IBA] [GO:0035050 "embryonic heart tube
            development" evidence=IBA] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=ISS;IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048703 "embryonic viscerocranium
            morphogenesis" evidence=IRD] [GO:0048844 "artery morphogenesis"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0050885 "neuromuscular process controlling
            balance" evidence=IBA] [GO:0055010 "ventricular cardiac muscle
            tissue morphogenesis" evidence=IBA] [GO:0060038 "cardiac muscle
            cell proliferation" evidence=IBA] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=ISS] [GO:0003677 "DNA
            binding" evidence=ISS] [GO:0001568 "blood vessel development"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0008286 GO:GO:0045892 GO:GO:0043565
            GO:GO:0030199 GO:GO:0045944 GO:GO:0050885 GO:GO:0040018
            GO:GO:0007219 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0001569
            GO:GO:0001570 GO:GO:0043433 GO:GO:0008134 GO:GO:0050880
            GO:GO:0001503 GO:GO:0048844 GO:GO:0031490 EMBL:AL160175
            GO:GO:0046620 GO:GO:0048010 GO:GO:0060038 GO:GO:0055010
            eggNOG:COG5025 GO:GO:0035050 GO:GO:0014034 GO:GO:0048343
            EMBL:BT009768 EMBL:BC013408 EMBL:AF042831 IPI:IPI00220488
            RefSeq:NP_004109.1 UniGene:Hs.516971 ProteinModelPortal:O43638
            SMR:O43638 IntAct:O43638 MINT:MINT-1437828 STRING:O43638
            PhosphoSite:O43638 PaxDb:O43638 PRIDE:O43638 DNASU:2307
            Ensembl:ENST00000375978 GeneID:2307 KEGG:hsa:2307 UCSC:uc002wwt.1
            CTD:2307 GeneCards:GC20M030432 HGNC:HGNC:3735 HPA:HPA042475
            MIM:602939 neXtProt:NX_O43638 PharmGKB:PA162388894
            HOGENOM:HOG000112635 HOVERGEN:HBG051661 InParanoid:O43638 KO:K09412
            OMA:KEPWVAG OrthoDB:EOG4F7NKG PhylomeDB:O43638 GenomeRNAi:2307
            NextBio:9371 Bgee:O43638 CleanEx:HS_FOXS1 Genevestigator:O43638
            GermOnline:ENSG00000179772 Uniprot:O43638
        Length = 330

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 63/97 (64%), Positives = 77/97 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SP +  TLS IY++IM  F FYR N+  WQNSIRH+LS N+CFV
Sbjct:    18 KPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF 219
             KVPR   KPGKGS+WTL  D  +MFE+G +LRR++RF
Sbjct:    78 KVPRDDRKPGKGSYWTLDPDCHDMFEHGSFLRRRRRF 114


>RGD|621727 [details] [associations]
            symbol:Foxe3 "forkhead box E3" species:10116 "Rattus norvegicus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001654 "eye development"
            evidence=ISO;IMP] [GO:0002089 "lens morphogenesis in camera-type
            eye" evidence=IBA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;ISO;NAS] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA;ISO;IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006366 "transcription from RNA polymerase II promoter"
            evidence=IEA;ISO] [GO:0006590 "thyroid hormone generation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0016477 "cell migration" evidence=IBA] [GO:0030878 "thyroid
            gland development" evidence=IBA] [GO:0031069 "hair follicle
            morphogenesis" evidence=IBA] [GO:0043010 "camera-type eye
            development" evidence=IEA;ISO;IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048468 "cell development" evidence=IEA;ISO;IMP] [GO:0048484
            "enteric nervous system development" evidence=IBA] [GO:0048485
            "sympathetic nervous system development" evidence=IRD] [GO:0048562
            "embryonic organ morphogenesis" evidence=IBA] [GO:0048846 "axon
            extension involved in axon guidance" evidence=IRD] [GO:0048937
            "lateral line nerve glial cell development" evidence=IRD]
            [GO:0050679 "positive regulation of epithelial cell proliferation"
            evidence=IEA;ISO;IMP] [GO:0051090 "regulation of sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0060022 "hard palate development" evidence=IBA] [GO:0060023
            "soft palate development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621727
            GO:GO:0016477 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048468 GO:GO:0048484 GO:GO:0051090 GO:GO:0031069
            GO:GO:0050679 GO:GO:0006590 GO:GO:0002089 GO:GO:0060023
            eggNOG:COG5025 GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286
            GO:GO:0048562 OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011
            PIR:I60921 UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250
            STRING:Q63250 PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 59/98 (60%), Positives = 79/98 (80%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MA+ ++P + LTL+ IY+FI + F FYR + ++WQNSIRH+L+ NDCFV
Sbjct:     3 KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR P  PGKG++WTL   + +MF+NG +LRR+KRFK
Sbjct:    63 KVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFK 100


>UNIPROTKB|Q63250 [details] [associations]
            symbol:Foxe3 "Forkhead box protein E3" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0050679 "positive regulation of epithelial cell
            proliferation" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:621727 GO:GO:0016477
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0048468
            GO:GO:0048484 GO:GO:0051090 GO:GO:0031069 GO:GO:0050679
            GO:GO:0006590 GO:GO:0002089 GO:GO:0060023 eggNOG:COG5025
            GO:GO:0060022 GO:GO:0030878 HOGENOM:HOG000231286 GO:GO:0048562
            OrthoDB:EOG4001JR EMBL:L13207 IPI:IPI00231011 PIR:I60921
            UniGene:Rn.92407 ProteinModelPortal:Q63250 SMR:Q63250 STRING:Q63250
            PhosphoSite:Q63250 UCSC:RGD:621727 InParanoid:Q63250
            Genevestigator:Q63250 GermOnline:ENSRNOG00000007770 Uniprot:Q63250
        Length = 101

 Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
 Identities = 59/98 (60%), Positives = 79/98 (80%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MA+ ++P + LTL+ IY+FI + F FYR + ++WQNSIRH+L+ NDCFV
Sbjct:     3 KPPYSYIALIAMALAHAPGRRLTLAAIYRFITERFAFYRDSPRKWQNSIRHNLTLNDCFV 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR P  PGKG++WTL   + +MF+NG +LRR+KRFK
Sbjct:    63 KVPREPGNPGKGNYWTLDPAAADMFDNGSFLRRRKRFK 100


>UNIPROTKB|F1N694 [details] [associations]
            symbol:LOC529218 "Uncharacterized protein" species:9913
            "Bos taurus" [GO:0060021 "palate development" evidence=IEA]
            [GO:0048806 "genitalia development" evidence=IEA] [GO:0048596
            "embryonic camera-type eye morphogenesis" evidence=IEA] [GO:0048566
            "embryonic digestive tract development" evidence=IEA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042249
            "establishment of planar polarity of embryonic epithelium"
            evidence=IEA] [GO:0030198 "extracellular matrix organization"
            evidence=IEA] [GO:0008134 "transcription factor binding"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0045892 GO:GO:0043565
            GO:GO:0045944 GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0005667 GO:GO:0048806
            GO:GO:0048566 GO:GO:0060021 GO:GO:0042249
            GeneTree:ENSGT00690000101636 KO:K09399 OMA:SPYIKQQ
            EMBL:DAAA02055925 IPI:IPI00842377 RefSeq:XP_003587799.1
            Ensembl:ENSBTAT00000042722 GeneID:529218 KEGG:bta:529218
            Uniprot:F1N694
        Length = 351

 Score = 303 (111.7 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 54/97 (55%), Positives = 71/97 (73%)

Query:   124 PPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVK 183
             PPYSYI+LI MAIQ+SP K LTLSEIY F+   FPF+R   Q W+NS+RH+LS N+CF+K
Sbjct:     1 PPYSYIALIVMAIQSSPAKRLTLSEIYHFLQARFPFFRGAYQGWKNSVRHNLSLNECFIK 60

Query:   184 VPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             +P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    61 LPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 97

 Score = 55 (24.4 bits), Expect = 3.8e-31, Sum P(2) = 3.8e-31
 Identities = 19/62 (30%), Positives = 24/62 (38%)

Query:   273 SPETKPHLSELAMLGLTKEDAMSAGLLHSDFQQNSYHQSFHQQDSELAAMVASGRCHPHL 332
             SP   P+L +   L      A  AGL HS     S  QS+  Q++     V   R   H 
Sbjct:   248 SPGASPYLKQPPALTPGSTPAAPAGL-HSSMSSYSLEQSYLHQNAREDLPVGLPRYQHHS 306

Query:   333 IP 334
              P
Sbjct:   307 TP 308

 Score = 43 (20.2 bits), Expect = 6.8e-30, Sum P(2) = 6.8e-30
 Identities = 8/18 (44%), Positives = 10/18 (55%)

Query:   324 ASGRCHPHLIPPDHYNHH 341
             A G  HPH     H++HH
Sbjct:   159 APGHAHPH----HHHHHH 172


>FB|FBgn0004896 [details] [associations]
            symbol:fd59A "forkhead domain 59A" species:7227 "Drosophila
            melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0009790 "embryo
            development" evidence=IBA;NAS] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048485 "sympathetic
            nervous system development" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0048937 "lateral line nerve glial cell development"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 EMBL:AE013599 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048485 GO:GO:0048484
            GO:GO:0051090 GO:GO:0048846 eggNOG:COG5025 GO:GO:0009888
            EMBL:AY084204 EMBL:BT025198 EMBL:M96442 PIR:C46178
            RefSeq:NP_523814.1 UniGene:Dm.738 ProteinModelPortal:Q02361
            SMR:Q02361 DIP:DIP-19745N MINT:MINT-295526 PRIDE:Q02361
            EnsemblMetazoa:FBtr0071898 GeneID:37631 KEGG:dme:Dmel_CG3668
            CTD:37631 FlyBase:FBgn0004896 GeneTree:ENSGT00700000104135
            InParanoid:Q02361 KO:K09397 OMA:FNFFANA OrthoDB:EOG4Z08NS
            PhylomeDB:Q02361 GenomeRNAi:37631 NextBio:804648 Bgee:Q02361
            GermOnline:CG3668 GO:GO:0048937 Uniprot:Q02361
        Length = 456

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 63/98 (64%), Positives = 75/98 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I  FIM  FP+Y+     WQNSIRH+LS NDCF+
Sbjct:    85 KPPYSYIALITMAILQSPHKKLTLSGICDFIMSRFPYYKDKFPAWQNSIRHNLSLNDCFI 144

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR P  PGKG+FWTL   + +MF+NG +LRR+KR+K
Sbjct:   145 KVPREPGNPGKGNFWTLDPLAEDMFDNGSFLRRRKRYK 182


>UNIPROTKB|Q9NU39 [details] [associations]
            symbol:FOXD4L1 "Forkhead box protein D4-like 1"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 EMBL:AL078621 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935
            HOGENOM:HOG000231285 HPA:HPA012836 OMA:PRERNEG EMBL:AF452723
            EMBL:AY344639 EMBL:AK125398 EMBL:BC136428 IPI:IPI00018380
            RefSeq:NP_036316.1 UniGene:Hs.591554 ProteinModelPortal:Q9NU39
            SMR:Q9NU39 STRING:Q9NU39 PhosphoSite:Q9NU39 DMDM:27923782
            PaxDb:Q9NU39 PRIDE:Q9NU39 DNASU:200350 Ensembl:ENST00000306507
            GeneID:200350 KEGG:hsa:200350 UCSC:uc002tjw.4 CTD:200350
            GeneCards:GC02P114256 HGNC:HGNC:18521 MIM:611084 neXtProt:NX_Q9NU39
            PharmGKB:PA134928763 InParanoid:Q9NU39 PhylomeDB:Q9NU39
            GenomeRNAi:200350 NextBio:89898 Bgee:Q9NU39 CleanEx:HS_FOXD4L1
            Genevestigator:Q9NU39 GermOnline:ENSG00000170122 Uniprot:Q9NU39
        Length = 408

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 64/99 (64%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  SP K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   106 AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 165

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   166 VKIPREPGHPGKGTYWSLDPASQDMFDNGSFLRRRKRFK 204


>MGI|MGI:1347467 [details] [associations]
            symbol:Foxd4 "forkhead box D4" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001755 "neural crest
            cell migration" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0007422 "peripheral nervous system
            development" evidence=IBA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0030318 "melanocyte differentiation" evidence=IBA] [GO:0030513
            "positive regulation of BMP signaling pathway" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0048484 "enteric nervous
            system development" evidence=IBA] [GO:0048485 "sympathetic nervous
            system development" evidence=IBA] [GO:0048846 "axon extension
            involved in axon guidance" evidence=IBA] [GO:0048937 "lateral line
            nerve glial cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347467
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935
            HOGENOM:HOG000231285 CTD:2298 EMBL:X86368 EMBL:BC138432
            EMBL:BC138434 EMBL:X71940 IPI:IPI00119218 PIR:B47746
            RefSeq:NP_032048.1 UniGene:Mm.377080 ProteinModelPortal:Q60688
            SMR:Q60688 PhosphoSite:Q60688 PRIDE:Q60688
            Ensembl:ENSMUST00000058600 GeneID:14237 KEGG:mmu:14237
            UCSC:uc008hav.1 InParanoid:B2RRJ0 OMA:PRERNEG NextBio:285527
            Bgee:Q60688 CleanEx:MM_FOXD4 Genevestigator:Q60688
            GermOnline:ENSMUSG00000051490 Uniprot:Q60688
        Length = 444

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 64/99 (64%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  SP K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   102 AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 161

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   162 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 200


>RGD|621716 [details] [associations]
            symbol:Foxd4 "forkhead box D4" species:10116 "Rattus norvegicus"
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048484 "enteric nervous system development"
            evidence=IBA] [GO:0048485 "sympathetic nervous system development"
            evidence=IBA] [GO:0048846 "axon extension involved in axon
            guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:621716 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937 OrthoDB:EOG45MN6S
            GO:GO:0060678 GO:GO:0050935 EMBL:L13206 IPI:IPI00763560 PIR:I60920
            UniGene:Rn.198192 ProteinModelPortal:Q63249 SMR:Q63249
            PhosphoSite:Q63249 Ensembl:ENSRNOT00000066752 UCSC:RGD:621716
            HOGENOM:HOG000198507 Genevestigator:Q63249 Uniprot:Q63249
        Length = 101

 Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
 Identities = 64/99 (64%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  SP K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:     2 AKPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 61

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:    62 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 100


>UNIPROTKB|Q4H3I6 [details] [associations]
            symbol:Ci-FoxI-a "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888
            GeneTree:ENSGT00690000101636 EMBL:EAAA01002694 EMBL:AB210436
            RefSeq:NP_001071711.1 UniGene:Cin.32849 SMR:Q4H3I6
            Ensembl:ENSCINT00000014814 GeneID:778614 KEGG:cin:778614 CTD:778614
            HOGENOM:HOG000134552 InParanoid:Q4H3I6 OMA:PLMECIA Uniprot:Q4H3I6
        Length = 732

 Score = 320 (117.7 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
 Identities = 57/109 (52%), Positives = 82/109 (75%)

Query:   118 SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 177
             S T+ +PPYSY +LI +AIQ+SP K +TL +IYQ+++  FPFY+ ++  W+NSIRH+LS 
Sbjct:   498 SDTNNRPPYSYSALIALAIQSSPGKRMTLRQIYQYVVTYFPFYKNSKTGWRNSIRHNLSL 557

Query:   178 NDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             NDCF KVPR  + PGKG++WTL   S  MF+NG + RR++R + D ++V
Sbjct:   558 NDCFKKVPRNENDPGKGNYWTLDPGSEKMFDNGNFRRRRRR-RADMRDV 605

 Score = 55 (24.4 bits), Expect = 4.7e-31, Sum P(2) = 4.7e-31
 Identities = 20/91 (21%), Positives = 41/91 (45%)

Query:    14 PGMTPSYSMNSVINSCSPQS--GSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMG-YS 70
             P ++P     + +   SP +      +PLG +  + +S+G  +    P     G+ G Y+
Sbjct:   257 PSLSPLMECIAALQGTSPAADLSEIPSPLGEYDLD-YSLGKSDYDTKPYGSVWGNDGRYT 315

Query:    71 SNMNAACMGGINSYNTALTTGRAELAENSPS 101
              + + A    +++Y+   T+G   L  +S S
Sbjct:   316 DDSSQATFTSLSNYSANYTSGSQGLMPHSYS 346

 Score = 52 (23.4 bits), Expect = 9.8e-31, Sum P(2) = 9.8e-31
 Identities = 27/87 (31%), Positives = 37/87 (42%)

Query:    33 SGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACM-GGINSYNTALTTG 91
             S +T T L  +S+N ++ GS  G+  P+  S    G  SN N +C     NSY   +  G
Sbjct:   319 SQATFTSLSNYSAN-YTSGS-QGLM-PHSYS----GPYSNENNSCQYASSNSYTEGIMQG 371

Query:    92 RAELAENSPSPGALQRVARADKTYRRS 118
                   NS    A +   RA  T   S
Sbjct:   372 PHRPYYNSKKTIATREAFRAVGTQDES 398


>RGD|1310679 [details] [associations]
            symbol:Foxs1 "forkhead box S1" species:10116 "Rattus norvegicus"
            [GO:0001503 "ossification" evidence=IBA] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001569 "patterning of blood
            vessels" evidence=IBA] [GO:0001570 "vasculogenesis" evidence=IBA]
            [GO:0001656 "metanephros development" evidence=IRD] [GO:0001657
            "ureteric bud development" evidence=IRD] [GO:0001756
            "somitogenesis" evidence=IBA] [GO:0001946 "lymphangiogenesis"
            evidence=IBA] [GO:0001974 "blood vessel remodeling" evidence=IBA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007219 "Notch signaling pathway" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008286 "insulin receptor signaling pathway" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0014034
            "neural crest cell fate commitment" evidence=IBA] [GO:0030199
            "collagen fibril organization" evidence=IBA] [GO:0031490 "chromatin
            DNA binding" evidence=IBA] [GO:0035050 "embryonic heart tube
            development" evidence=IBA] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=ISO;IBA] [GO:0043010
            "camera-type eye development" evidence=IBA] [GO:0043433 "negative
            regulation of sequence-specific DNA binding transcription factor
            activity" evidence=ISO;IBA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0046620 "regulation of organ growth"
            evidence=IBA] [GO:0048010 "vascular endothelial growth factor
            receptor signaling pathway" evidence=IBA] [GO:0048343 "paraxial
            mesodermal cell fate commitment" evidence=IBA] [GO:0048703
            "embryonic viscerocranium morphogenesis" evidence=IRD] [GO:0048844
            "artery morphogenesis" evidence=IBA] [GO:0050880 "regulation of
            blood vessel size" evidence=IBA] [GO:0050885 "neuromuscular process
            controlling balance" evidence=ISO;IBA] [GO:0055010 "ventricular
            cardiac muscle tissue morphogenesis" evidence=IBA] [GO:0060038
            "cardiac muscle cell proliferation" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:1310679 GO:GO:0008286 GO:GO:0045892 GO:GO:0043565 GO:GO:0030199
            GO:GO:0045944 GO:GO:0050885 GO:GO:0040018 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:CH474050 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0001569
            GO:GO:0001570 GO:GO:0043433 GO:GO:0008134 GO:GO:0050880
            GO:GO:0001503 GO:GO:0048844 GO:GO:0031490 GO:GO:0046620
            GO:GO:0048010 GO:GO:0060038 GO:GO:0055010 eggNOG:COG5025
            GO:GO:0035050 GeneTree:ENSGT00690000101636 GO:GO:0014034
            GO:GO:0048343 CTD:2307 HOGENOM:HOG000112635 HOVERGEN:HBG051661
            KO:K09412 OMA:KEPWVAG OrthoDB:EOG4F7NKG EMBL:BC089055
            IPI:IPI00364746 RefSeq:NP_001012091.1 UniGene:Rn.3227 SMR:Q5HZE9
            Ensembl:ENSRNOT00000011262 GeneID:311547 KEGG:rno:311547
            UCSC:RGD:1310679 InParanoid:Q5HZE9 NextBio:663787
            Genevestigator:Q5HZE9 Uniprot:Q5HZE9
        Length = 327

 Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
 Identities = 62/98 (63%), Positives = 78/98 (79%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             +KPPYSYI+LI MAIQ+SP +  TLS IY++IM  F FYR N+  WQNSIRH+LS N+CF
Sbjct:    17 SKPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECF 76

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF 219
             VKVPR   KPGKGS+WTL  D  +MF++G +LRR++RF
Sbjct:    77 VKVPRDDRKPGKGSYWTLDPDCHDMFQHGSFLRRRRRF 114


>MGI|MGI:1347470 [details] [associations]
            symbol:Foxf1 "forkhead box F1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0001568 "blood vessel
            development" evidence=ISO] [GO:0001570 "vasculogenesis"
            evidence=IMP] [GO:0001701 "in utero embryonic development"
            evidence=ISO;IMP] [GO:0001756 "somitogenesis" evidence=IMP]
            [GO:0001763 "morphogenesis of a branching structure" evidence=ISO]
            [GO:0002053 "positive regulation of mesenchymal cell proliferation"
            evidence=IMP] [GO:0003197 "endocardial cushion development"
            evidence=ISO] [GO:0003214 "cardiac left ventricle morphogenesis"
            evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO;IDA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0007224 "smoothened signaling pathway" evidence=IDA]
            [GO:0007368 "determination of left/right symmetry" evidence=IMP]
            [GO:0007494 "midgut development" evidence=ISO] [GO:0007498
            "mesoderm development" evidence=IGI;IMP] [GO:0007507 "heart
            development" evidence=ISO] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009887 "organ morphogenesis" evidence=IMP]
            [GO:0010811 "positive regulation of cell-substrate adhesion"
            evidence=IMP] [GO:0014822 "detection of wounding" evidence=IMP]
            [GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0030198
            "extracellular matrix organization" evidence=IGI] [GO:0030323
            "respiratory tube development" evidence=ISO] [GO:0030324 "lung
            development" evidence=ISO;IMP] [GO:0030335 "positive regulation of
            cell migration" evidence=IMP] [GO:0031016 "pancreas development"
            evidence=ISO] [GO:0043305 "negative regulation of mast cell
            degranulation" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0044212 "transcription regulatory region
            DNA binding" evidence=IDA] [GO:0045198 "establishment of epithelial
            cell apical/basal polarity" evidence=IGI] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IMP;IDA] [GO:0048286 "lung
            alveolus development" evidence=IMP] [GO:0048371 "lateral mesodermal
            cell differentiation" evidence=IMP] [GO:0048557 "embryonic
            digestive tract morphogenesis" evidence=ISO] [GO:0048565 "digestive
            tract development" evidence=ISO] [GO:0048566 "embryonic digestive
            tract development" evidence=IGI] [GO:0048613 "embryonic ectodermal
            digestive tract morphogenesis" evidence=ISO] [GO:0048617 "embryonic
            foregut morphogenesis" evidence=IMP] [GO:0050728 "negative
            regulation of inflammatory response" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051145 "smooth muscle cell
            differentiation" evidence=IMP] [GO:0051150 "regulation of smooth
            muscle cell differentiation" evidence=IGI;IMP] [GO:0060425 "lung
            morphogenesis" evidence=IMP] [GO:0060426 "lung vasculature
            development" evidence=ISO] [GO:0060438 "trachea development"
            evidence=IMP] [GO:0060441 "epithelial tube branching involved in
            lung morphogenesis" evidence=IMP] [GO:0060446 "branching involved
            in open tracheal system development" evidence=ISO] [GO:0060461
            "right lung morphogenesis" evidence=IMP] [GO:0060463 "lung lobe
            morphogenesis" evidence=IMP] [GO:0060841 "venous blood vessel
            development" evidence=ISO] [GO:0061030 "epithelial cell
            differentiation involved in mammary gland alveolus development"
            evidence=IGI] [GO:0071345 "cellular response to cytokine stimulus"
            evidence=IDA] [GO:0071407 "cellular response to organic cyclic
            compound" evidence=IMP] [GO:0072001 "renal system development"
            evidence=ISO] [GO:0072189 "ureter development" evidence=ISO]
            [GO:0090131 "mesenchyme migration" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:1347470
            GO:GO:0050728 GO:GO:0043565 GO:GO:0001701 GO:GO:0045944
            GO:GO:0030198 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0007494 GO:GO:0000122 GO:GO:0008301
            GO:GO:0001756 GO:GO:0044212 GO:GO:0048286 GO:GO:0003690
            GO:GO:0016337 GO:GO:0060841 GO:GO:0007368 GO:GO:0051145
            GO:GO:0003197 GO:GO:0030335 GO:GO:0048566 GO:GO:0001570
            GO:GO:0010811 GO:GO:0008134 GO:GO:0031016 GO:GO:0071407
            GO:GO:0060438 GO:GO:0007224 GO:GO:0051090 GO:GO:0048617
            GO:GO:0002053 GO:GO:0051150 GO:GO:0060441 GO:GO:0045198
            GO:GO:0003214 GO:GO:0060446 GO:GO:0071345 GO:GO:0043305
            eggNOG:COG5025 GO:GO:0060426 GeneTree:ENSGT00690000101636
            GO:GO:0060463 GO:GO:0061030 CTD:2294 HOGENOM:HOG000060124 KO:K09399
            OrthoDB:EOG4BRWM4 HOVERGEN:HBG051644 GO:GO:0014822 GO:GO:0048613
            GO:GO:0048371 GO:GO:0090131 GO:GO:0060461 GO:GO:0072189 EMBL:L35949
            EMBL:AF346834 EMBL:BC138805 EMBL:BC138806 EMBL:U42556
            IPI:IPI00117086 PIR:I49735 RefSeq:NP_034556.2 UniGene:Mm.33897
            UniGene:Mm.390071 ProteinModelPortal:Q61080 SMR:Q61080
            STRING:Q61080 PhosphoSite:Q61080 Ensembl:ENSMUST00000050684
            GeneID:15227 KEGG:mmu:15227 UCSC:uc009nrn.1 InParanoid:B2RSC1
            NextBio:287815 Bgee:Q61080 CleanEx:MM_FOXF1A Genevestigator:Q61080
            GermOnline:ENSMUSG00000042812 Uniprot:Q61080
        Length = 378

 Score = 316 (116.3 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query:   110 RADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQN 169
             +A KT        KPPYSYI+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+N
Sbjct:    35 KAKKTNAGVRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKN 94

Query:   170 SIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             S+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    95 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 145

 Score = 40 (19.1 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAM 322
             +AM++  +H+    + YHQ    QD +   M
Sbjct:   348 NAMASSSMHTTGGGSYYHQQVTYQDIKPCVM 378


>RGD|1584229 [details] [associations]
            symbol:LOC687536 "similar to Forkhead box protein F1
            (Forkhead-related protein FKHL5) (Forkhead-related transcription
            factor 1) (FREAC-1) (Hepatocyte nuclear factor 3 forkhead homolog
            8) (HFH-8)" species:10116 "Rattus norvegicus" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            REFSEQ:XM_001079002 Ncbi:XP_001079002
        Length = 378

 Score = 316 (116.3 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 59/111 (53%), Positives = 78/111 (70%)

Query:   110 RADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQN 169
             +A KT        KPPYSYI+LI MAIQ+SP+K LTLSEIYQF+   FPF+R   Q W+N
Sbjct:    35 KAKKTNAGVRRPEKPPYSYIALIVMAIQSSPSKRLTLSEIYQFLQARFPFFRGAYQGWKN 94

Query:   170 SIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             S+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:    95 SVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 145

 Score = 40 (19.1 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 9/31 (29%), Positives = 16/31 (51%)

Query:   292 DAMSAGLLHSDFQQNSYHQSFHQQDSELAAM 322
             +AM++  +H+    + YHQ    QD +   M
Sbjct:   348 NAMASSSMHTTGGGSYYHQQVTYQDIKPCVM 378


>UNIPROTKB|F1RX14 [details] [associations]
            symbol:FOXF2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0060021 "palate development" evidence=IEA] [GO:0048806
            "genitalia development" evidence=IEA] [GO:0048596 "embryonic
            camera-type eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
            digestive tract development" evidence=IEA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0042249 "establishment of planar
            polarity of embryonic epithelium" evidence=IEA] [GO:0030198
            "extracellular matrix organization" evidence=IEA] [GO:0008134
            "transcription factor binding" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0043565 GO:GO:0045944
            GO:GO:0030198 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0005667 GO:GO:0048806 GO:GO:0048566
            GO:GO:0060021 GO:GO:0042249 GeneTree:ENSGT00690000101636
            OMA:SPYIKQQ EMBL:CU012041 Ensembl:ENSSSCT00000001082 Uniprot:F1RX14
        Length = 399

 Score = 313 (115.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 56/98 (57%), Positives = 73/98 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SP K LTLSEIYQF+   FPF+R   Q W+NS+RH+LS N+CF+
Sbjct:    59 KPPYSYIALIVMAIQSSPAKRLTLSEIYQFLQARFPFFRGAYQGWKNSVRHNLSLNECFI 118

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   119 KLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 156

 Score = 43 (20.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query:   324 ASGRCHPHLIPPDHYNHHL 342
             A G  HPH     H++HH+
Sbjct:   218 APGHAHPH-----HHHHHV 231


>MGI|MGI:95546 [details] [associations]
            symbol:Foxs1 "forkhead box S1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001503 "ossification"
            evidence=IBA] [GO:0001568 "blood vessel development" evidence=IMP]
            [GO:0001569 "patterning of blood vessels" evidence=IBA] [GO:0001570
            "vasculogenesis" evidence=IBA] [GO:0001756 "somitogenesis"
            evidence=IBA] [GO:0001946 "lymphangiogenesis" evidence=IBA]
            [GO:0001974 "blood vessel remodeling" evidence=IBA] [GO:0003677
            "DNA binding" evidence=IDA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007219 "Notch signaling pathway"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008286 "insulin receptor signaling pathway"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0014034 "neural crest cell fate commitment" evidence=IBA]
            [GO:0030199 "collagen fibril organization" evidence=IBA]
            [GO:0031490 "chromatin DNA binding" evidence=IBA] [GO:0035050
            "embryonic heart tube development" evidence=IBA] [GO:0040018
            "positive regulation of multicellular organism growth"
            evidence=IMP] [GO:0043010 "camera-type eye development"
            evidence=IBA] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IBA] [GO:0043433 "negative regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0046620 "regulation of organ growth" evidence=IBA] [GO:0048010
            "vascular endothelial growth factor receptor signaling pathway"
            evidence=IBA] [GO:0048343 "paraxial mesodermal cell fate
            commitment" evidence=IBA] [GO:0048844 "artery morphogenesis"
            evidence=IBA] [GO:0050880 "regulation of blood vessel size"
            evidence=IBA] [GO:0050885 "neuromuscular process controlling
            balance" evidence=IMP] [GO:0055010 "ventricular cardiac muscle
            tissue morphogenesis" evidence=IBA] [GO:0060038 "cardiac muscle
            cell proliferation" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 MGI:MGI:95546
            GO:GO:0008286 GO:GO:0043066 GO:GO:0043565 GO:GO:0030199
            GO:GO:0045944 GO:GO:0050885 GO:GO:0040018 GO:GO:0007219
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0001756 GO:GO:0043010
            GO:GO:0001974 GO:GO:0003690 GO:GO:0001946 GO:GO:0001569
            GO:GO:0001570 GO:GO:0043433 GO:GO:0008134 GO:GO:0050880
            GO:GO:0001503 GO:GO:0048844 GO:GO:0031490 GO:GO:0046620
            GO:GO:0048010 GO:GO:0060038 GO:GO:0055010 eggNOG:COG5025
            GO:GO:0035050 GeneTree:ENSGT00690000101636 GO:GO:0014034
            GO:GO:0048343 CTD:2307 HOGENOM:HOG000112635 HOVERGEN:HBG051661
            KO:K09412 OMA:KEPWVAG OrthoDB:EOG4F7NKG EMBL:AK077935 EMBL:X71941
            IPI:IPI00122487 PIR:C47746 RefSeq:NP_034356.1 UniGene:Mm.205798
            ProteinModelPortal:Q61574 SMR:Q61574 STRING:Q61574
            PhosphoSite:Q61574 PRIDE:Q61574 Ensembl:ENSMUST00000099200
            GeneID:14239 KEGG:mmu:14239 InParanoid:Q61574 NextBio:285535
            Bgee:Q61574 Genevestigator:Q61574 GermOnline:ENSMUSG00000074676
            Uniprot:Q61574
        Length = 329

 Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
 Identities = 62/97 (63%), Positives = 77/97 (79%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LI MAIQ+SP +  TLS IY++IM  F FYR N+  WQNSIRH+LS N+CFV
Sbjct:    18 KPPYSYIALIAMAIQSSPGQRATLSGIYRYIMGRFAFYRHNRPGWQNSIRHNLSLNECFV 77

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF 219
             KVPR   KPGKGS+WTL  D  +MF++G +LRR++RF
Sbjct:    78 KVPRDDRKPGKGSYWTLDPDCHDMFQHGSFLRRRRRF 114


>UNIPROTKB|Q12950 [details] [associations]
            symbol:FOXD4 "Forkhead box protein D4" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=TAS] [GO:0005634 "nucleus"
            evidence=IDA;NAS] [GO:0007275 "multicellular organismal
            development" evidence=NAS] [GO:0001755 "neural crest cell
            migration" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=ISS;IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=NAS]
            [GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0001755
            GO:GO:0043565 GO:GO:0045944 GO:GO:0007422 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0009790 GO:GO:0003690 GO:GO:0030513 GO:GO:0051216
            GO:GO:0008134 GO:GO:0007389 GO:GO:0048485 GO:GO:0030318
            GO:GO:0048484 GO:GO:0051090 GO:GO:0090184 GO:GO:0048846
            EMBL:AL449043 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 OrthoDB:EOG45MN6S GO:GO:0060678 GO:GO:0050935
            EMBL:AF343004 EMBL:BC089432 EMBL:BC136570 EMBL:BC136571 EMBL:U13223
            EMBL:AF452724 IPI:IPI00030339 PIR:S51628 RefSeq:NP_997188.2
            UniGene:Hs.584759 ProteinModelPortal:Q12950 SMR:Q12950
            STRING:Q12950 DMDM:311033480 PaxDb:Q12950 PRIDE:Q12950
            Ensembl:ENST00000382500 GeneID:2298 KEGG:hsa:2298 UCSC:uc003zfz.3
            CTD:2298 GeneCards:GC09M000116 HGNC:HGNC:3805 HPA:HPA012836
            MIM:601092 neXtProt:NX_Q12950 PharmGKB:PA28222 InParanoid:Q12950
            OMA:GGCTSFS PhylomeDB:Q12950 GenomeRNAi:2298 NextBio:9327
            Bgee:Q12950 CleanEx:HS_FOXD4 Genevestigator:Q12950
            GermOnline:ENSG00000184492 Uniprot:Q12950
        Length = 439

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 77/99 (77%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPP SYI+LITMAI  SP K LTLS I  FI D FP+YR+    WQNSIRH+LS NDCF
Sbjct:   103 AKPPSSYIALITMAILQSPHKRLTLSGICAFISDRFPYYRRKFPAWQNSIRHNLSLNDCF 162

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P +PGKG++W+L   S +MF+NG +LRR+KRF+
Sbjct:   163 VKIPREPGRPGKGNYWSLDPASQDMFDNGSFLRRRKRFQ 201


>UNIPROTKB|Q3SYB3 [details] [associations]
            symbol:FOXD4L6 "Forkhead box protein D4-like 6"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 EMBL:BX255923 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            HPA:HPA012836 HSSP:Q01167 OrthoDB:EOG4JM7Q5 UniGene:Hs.652377
            EMBL:BC103887 EMBL:BC137365 EMBL:BC137366 IPI:IPI00654829
            RefSeq:NP_001078945.1 ProteinModelPortal:Q3SYB3 SMR:Q3SYB3
            IntAct:Q3SYB3 STRING:Q3SYB3 DMDM:166214939 PRIDE:Q3SYB3
            Ensembl:ENST00000377473 GeneID:653404 KEGG:hsa:653404
            UCSC:uc004afi.2 CTD:653404 GeneCards:GC09M069199 HGNC:HGNC:31986
            neXtProt:NX_Q3SYB3 PharmGKB:PA162388805 InParanoid:Q3SYB3
            OMA:RACCTIR GenomeRNAi:653404 NextBio:123194 ArrayExpress:Q3SYB3
            CleanEx:HS_FOXD4L6 Genevestigator:Q3SYB3 Uniprot:Q3SYB3
        Length = 417

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|Q5VV16 [details] [associations]
            symbol:FOXD4L5 "Forkhead box protein D4-like 5"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 GO:GO:0048937 HSSP:Q63245 HOVERGEN:HBG051641
            GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285 HPA:HPA012836
            OrthoDB:EOG4JM7Q5 EMBL:AL512605 IPI:IPI00855883
            RefSeq:NP_001119806.1 UniGene:Hs.652377 UniGene:Hs.714683
            ProteinModelPortal:Q5VV16 SMR:Q5VV16 STRING:Q5VV16 DMDM:74747187
            PRIDE:Q5VV16 Ensembl:ENST00000377420 GeneID:653427 KEGG:hsa:653427
            UCSC:uc010moc.3 CTD:653427 GeneCards:GC09M070175 HGNC:HGNC:18522
            neXtProt:NX_Q5VV16 PharmGKB:PA162388804 InParanoid:Q5VV16
            GenomeRNAi:653427 NextBio:123231 ArrayExpress:Q5VV16
            CleanEx:HS_FOXD4L5 Genevestigator:Q5VV16 Uniprot:Q5VV16
        Length = 416

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|Q6VB84 [details] [associations]
            symbol:FOXD4L3 "Forkhead box protein D4-like 3"
            species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 EMBL:AL353608 KO:K09397 HSSP:Q63245
            HOVERGEN:HBG051641 HOGENOM:HOG000231285 HPA:HPA012836
            UniGene:Hs.449471 EMBL:AY344642 IPI:IPI00399264 RefSeq:NP_954586.4
            ProteinModelPortal:Q6VB84 SMR:Q6VB84 STRING:Q6VB84 DMDM:74722852
            PRIDE:Q6VB84 DNASU:286380 Ensembl:ENST00000342833
            Ensembl:ENST00000577592 GeneID:286380 KEGG:hsa:286380
            UCSC:uc004agm.1 CTD:286380 GeneCards:GC09P070917 HGNC:HGNC:18523
            MIM:611086 neXtProt:NX_Q6VB84 PharmGKB:PA134941846
            InParanoid:Q6VB84 OMA:TAWSYCH PhylomeDB:Q6VB84 GenomeRNAi:286380
            NextBio:96184 ArrayExpress:Q6VB84 Bgee:Q6VB84 Genevestigator:Q6VB84
            Uniprot:Q6VB84
        Length = 417

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|Q6VB85 [details] [associations]
            symbol:FOXD4L2 "Forkhead box protein D4-like 2"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 EMBL:AC129778 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            HSSP:Q63245 HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935
            HPA:HPA012836 EMBL:AY344641 IPI:IPI00847706 RefSeq:NP_001092749.1
            RefSeq:NP_954714.2 UniGene:Hs.449471 UniGene:Hs.534644
            UniGene:Hs.712520 ProteinModelPortal:Q6VB85 SMR:Q6VB85
            STRING:Q6VB85 DMDM:74722853 PRIDE:Q6VB85 DNASU:349334
            Ensembl:ENST00000377590 GeneID:100036519 GeneID:349334
            KEGG:hsa:100036519 KEGG:hsa:349334 UCSC:uc004acn.3 CTD:100036519
            CTD:349334 GeneCards:GC09P042708 HGNC:HGNC:24813 MIM:611085
            neXtProt:NX_Q6VB85 InParanoid:Q6VB85 OrthoDB:EOG4JM7Q5
            PhylomeDB:Q6VB85 NextBio:136087 ArrayExpress:Q6VB85 Bgee:Q6VB85
            CleanEx:HS_FOXD4L2 Genevestigator:Q6VB85 Uniprot:Q6VB85
        Length = 416

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|Q8WXT5 [details] [associations]
            symbol:FOXD4L4 "Forkhead box protein D4-like 4"
            species:9606 "Homo sapiens" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0001755 "neural crest cell migration"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0007422 "peripheral nervous system development"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0030318
            "melanocyte differentiation" evidence=IBA] [GO:0030513 "positive
            regulation of BMP signaling pathway" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048484 "enteric nervous system
            development" evidence=IBA] [GO:0048485 "sympathetic nervous system
            development" evidence=IBA] [GO:0048846 "axon extension involved in
            axon guidance" evidence=IBA] [GO:0048937 "lateral line nerve glial
            cell development" evidence=IBA] [GO:0050935 "iridophore
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0051216 "cartilage development" evidence=IBA]
            [GO:0060678 "dichotomous subdivision of terminal units involved in
            ureteric bud branching" evidence=IBA] [GO:0090184 "positive
            regulation of kidney development" evidence=IBA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0001755 GO:GO:0043565 GO:GO:0045944 GO:GO:0007422
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0009790 GO:GO:0003690 GO:GO:0030513
            GO:GO:0051216 GO:GO:0008134 GO:GO:0007389 GO:GO:0048485
            GO:GO:0030318 GO:GO:0048484 GO:GO:0051090 GO:GO:0090184
            GO:GO:0048846 EMBL:BX284632 eggNOG:COG5025 KO:K09397 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            HPA:HPA012836 IPI:IPI00847706 RefSeq:NP_001092749.1
            RefSeq:NP_954714.2 UniGene:Hs.534644 UniGene:Hs.712520 DNASU:349334
            GeneID:100036519 GeneID:349334 KEGG:hsa:100036519 KEGG:hsa:349334
            CTD:100036519 CTD:349334 OrthoDB:EOG4JM7Q5 NextBio:136087
            EMBL:AF343005 ProteinModelPortal:Q8WXT5 SMR:Q8WXT5 STRING:Q8WXT5
            PhosphoSite:Q8WXT5 PRIDE:Q8WXT5 Ensembl:ENST00000377413
            GeneCards:GC09M070427 HGNC:HGNC:23762 neXtProt:NX_Q8WXT5
            PharmGKB:PA142671752 InParanoid:Q8WXT5 PhylomeDB:Q8WXT5
            ArrayExpress:Q8WXT5 Bgee:Q8WXT5 CleanEx:HS_FOXD4L4
            Genevestigator:Q8WXT5 GermOnline:ENSG00000204828 Uniprot:Q8WXT5
        Length = 416

 Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
 Identities = 63/99 (63%), Positives = 76/99 (76%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|F1SJE7 [details] [associations]
            symbol:F1SJE7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 OMA:TAWSYCH EMBL:CU468110
            Ensembl:ENSSSCT00000005776 Uniprot:F1SJE7
        Length = 444

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 63/98 (64%), Positives = 75/98 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSYI+LITMAI  SP K LTLS I  FI   FP+YR+    WQNSIRH+LS NDCFV
Sbjct:   107 KPPYSYIALITMAILQSPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIRHNLSLNDCFV 166

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 KIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 204


>UNIPROTKB|Q28D67 [details] [associations]
            symbol:foxi1c "Forkhead box protein I1c" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            eggNOG:COG5025 HSSP:Q01167 HOGENOM:HOG000236333 HOVERGEN:HBG067944
            KO:K09401 CTD:446212 EMBL:CR855676 RefSeq:NP_001016787.1
            UniGene:Str.27482 ProteinModelPortal:Q28D67 SMR:Q28D67
            STRING:Q28D67 GeneID:549541 KEGG:xtr:549541 Xenbase:XB-GENE-5996107
            Uniprot:Q28D67
        Length = 358

 Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
 Identities = 59/99 (59%), Positives = 77/99 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQN+P K LTLS+IYQ++ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   106 RPPYSYSALIAMAIQNAPEKKLTLSQIYQYVADNFPFYKRSKAGWQNSIRHNLSLNDCFK 165

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   166 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRSD 204


>UNIPROTKB|Q6VAE8 [details] [associations]
            symbol:FOXD4 "FOXD4" species:9598 "Pan troglodytes"
            [GO:0001755 "neural crest cell migration" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0007422 "peripheral
            nervous system development" evidence=IBA] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009790 "embryo development"
            evidence=IBA] [GO:0030318 "melanocyte differentiation"
            evidence=IBA] [GO:0030513 "positive regulation of BMP signaling
            pathway" evidence=IBA] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048484 "enteric nervous system development" evidence=IBA]
            [GO:0048485 "sympathetic nervous system development" evidence=IBA]
            [GO:0048846 "axon extension involved in axon guidance"
            evidence=IBA] [GO:0048937 "lateral line nerve glial cell
            development" evidence=IBA] [GO:0050935 "iridophore differentiation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0051216
            "cartilage development" evidence=IBA] [GO:0060678 "dichotomous
            subdivision of terminal units involved in ureteric bud branching"
            evidence=IBA] [GO:0090184 "positive regulation of kidney
            development" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS50039
            SMART:SM00339 GO:GO:0001755 GO:GO:0043565 GO:GO:0045944
            GO:GO:0007422 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0030513 GO:GO:0051216 GO:GO:0008134 GO:GO:0007389
            GO:GO:0048485 GO:GO:0030318 GO:GO:0048484 GO:GO:0051090
            GO:GO:0090184 GO:GO:0048846 eggNOG:COG5025 GO:GO:0048937
            HOVERGEN:HBG051641 GO:GO:0060678 GO:GO:0050935 HOGENOM:HOG000231285
            HSSP:Q01167 OrthoDB:EOG4JM7Q5 EMBL:AY345865 UniGene:Ptr.6432
            ProteinModelPortal:Q6VAE8 SMR:Q6VAE8 STRING:Q6VAE8
            InParanoid:Q6VAE8 Uniprot:Q6VAE8
        Length = 417

 Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
 Identities = 62/99 (62%), Positives = 75/99 (75%)

Query:   122 AKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCF 181
             AKPPYSYI+LITMAI  +P K LTLS I  FI   FP+YR+    WQNSI H+LS NDCF
Sbjct:   107 AKPPYSYIALITMAILQNPHKRLTLSGICAFISGRFPYYRRKFPAWQNSIHHNLSLNDCF 166

Query:   182 VKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             VK+PR P  PGKG++W+L   S +MF+NG +LRR+KRFK
Sbjct:   167 VKIPREPGHPGKGNYWSLDPASQDMFDNGSFLRRRKRFK 205


>UNIPROTKB|Q8JIT5 [details] [associations]
            symbol:foxi1c "Forkhead box protein I1c" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0043565
            "sequence-specific DNA binding" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:AJ487620 RefSeq:NP_001091120.1
            UniGene:Xl.43219 ProteinModelPortal:Q8JIT5 SMR:Q8JIT5 GeneID:446212
            KEGG:xla:446212 CTD:446212 Xenbase:XB-GENE-5996119 Uniprot:Q8JIT5
        Length = 381

 Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
 Identities = 58/99 (58%), Positives = 77/99 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQN+P K LTLS+IYQ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   129 RPPYSYSALIAMAIQNAPEKKLTLSQIYQYVAENFPFYKRSKAGWQNSIRHNLSLNDCFK 188

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   189 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRSD 227


>ZFIN|ZDB-GENE-031126-2 [details] [associations]
            symbol:foxi2 "forkhead box I2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0006357 "regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-031126-2 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 GO:GO:0009957 HSSP:Q99958 HOVERGEN:HBG067944
            EMBL:AY331582 IPI:IPI00493834 UniGene:Dr.152085
            ProteinModelPortal:Q7T1C2 SMR:Q7T1C2 InParanoid:Q7T1C2
            Uniprot:Q7T1C2
        Length = 383

 Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
 Identities = 72/171 (42%), Positives = 100/171 (58%)

Query:    56 MNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTY 115
             +NGP   S+ S  + +N  +       S    L+      A   P  G L  +A  ++  
Sbjct:    70 LNGPGVNSSSSYIHGNNSPSFIPPAYGSQRQYLSNSSG-FA--GPDLGWLS-IASQEELL 125

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +      +PPYSY +LI MAIQN+  K LTLS+IYQ++ D FPFY++++  WQNSIRH+L
Sbjct:   126 KL----VRPPYSYSALIAMAIQNAHEKKLTLSQIYQYVADNFPFYKKSKAGWQNSIRHNL 181

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEV 226
             S NDCF KVPR  D PGKG++WTL  +   MF+NG + R++KR  D    V
Sbjct:   182 SLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRRSDSSTGV 232


>ZFIN|ZDB-GENE-110407-5 [details] [associations]
            symbol:foxf2a "forkhead box F2a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-110407-5 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:SPYIKQQ EMBL:CU856140
            IPI:IPI00611028 Ensembl:ENSDART00000028159 Bgee:F1QHL6
            Uniprot:F1QHL6
        Length = 383

 Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
 Identities = 66/139 (47%), Positives = 94/139 (67%)

Query:    82 NSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPT 141
             NS ++AL   +  L E++ + G   +  +++   RR     KPPYSYI+LI MAIQ+SPT
Sbjct:    23 NSMHSALQNTQTVL-ESTTATG--NKGKKSNSGMRRP---EKPPYSYIALIVMAIQSSPT 76

Query:   142 KMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHK 201
             K LTLSEIYQF+   FPF+R + Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+  
Sbjct:    77 KRLTLSEIYQFLQARFPFFRGSYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDP 136

Query:   202 DSGNMFENGCYLRRQKRFK 220
              S  MFE G + RR + F+
Sbjct:   137 GSEFMFEEGSFRRRPRGFR 155


>UNIPROTKB|F1MC99 [details] [associations]
            symbol:FOXI3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            EMBL:DAAA02031109 IPI:IPI00708357 Ensembl:ENSBTAT00000054707
            OMA:APGELGW Uniprot:F1MC99
        Length = 418

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS IYQF+ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   142 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 201

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   202 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 237


>UNIPROTKB|B5RHS5 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            EMBL:AM998820 RefSeq:NP_001129118.1 UniGene:Cfa.47611 GeneID:483075
            KEGG:cfa:483075 CTD:344167 NextBio:20857535 Uniprot:B5RHS5
        Length = 436

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS IYQF+ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   158 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 217

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   218 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 253


>UNIPROTKB|J9P6N9 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 OMA:APGELGW EMBL:AAEX03010925
            Ensembl:ENSCAFT00000043061 Uniprot:J9P6N9
        Length = 417

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS IYQF+ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   139 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 198

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   199 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 234


>UNIPROTKB|J9PB84 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AAEX03010925
            Ensembl:ENSCAFT00000045700 Uniprot:J9PB84
        Length = 369

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS IYQF+ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:    91 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 150

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   151 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 186


>UNIPROTKB|A8MTJ6 [details] [associations]
            symbol:FOXI3 "Forkhead box protein I3" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HOVERGEN:HBG067944
            KO:K09401 CTD:344167 EMBL:AC012671 EMBL:BN001221 EMBL:BN001222
            IPI:IPI00787337 RefSeq:NP_001129121.1 UniGene:Hs.716722
            ProteinModelPortal:A8MTJ6 SMR:A8MTJ6 PRIDE:A8MTJ6 GeneID:344167
            KEGG:hsa:344167 UCSC:uc010ytq.1 GeneCards:GC02M088747
            HGNC:HGNC:35123 MIM:612351 neXtProt:NX_A8MTJ6 PharmGKB:PA164720107
            InParanoid:A8MTJ6 GenomeRNAi:344167 NextBio:98650
            Genevestigator:A8MTJ6 Uniprot:A8MTJ6
        Length = 420

 Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
 Identities = 57/96 (59%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS IYQF+ D FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   145 RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADSFPFYQRSKAGWQNSIRHNLSLNDCFK 204

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   205 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 240


>RGD|1561816 [details] [associations]
            symbol:Foxi3 "forkhead box I3" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:1561816
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 EMBL:CH473957 GO:GO:0043049
            GO:GO:0009957 GeneTree:ENSGT00690000101636 KO:K09401
            OrthoDB:EOG457573 CTD:344167 IPI:IPI00188027 RefSeq:NP_001102819.1
            UniGene:Rn.218636 Ensembl:ENSRNOT00000008494 GeneID:502846
            KEGG:rno:502846 UCSC:RGD:1561816 NextBio:712574 Uniprot:D3ZLN2
        Length = 400

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 61/120 (50%), Positives = 84/120 (70%)

Query:    99 SPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFP 158
             S +PG L  ++ A +         +PPYSY +LI MAIQ++P + LTLS IYQF+ D FP
Sbjct:   109 SAAPGELGWLSMASREDLMKMV--RPPYSYSALIAMAIQSAPERKLTLSHIYQFVADNFP 166

Query:   159 FYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             FY++++  WQNSIRH+LS NDCF KVPR  D PGKG++WTL  +   MF+NG + R+++R
Sbjct:   167 FYQRSKAGWQNSIRHNLSLNDCFKKVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRRR 226


>ZFIN|ZDB-GENE-030505-1 [details] [associations]
            symbol:foxi1 "forkhead box i1" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA;IDA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA;IDA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0006357 "regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0060788 "ectodermal placode
            formation" evidence=IGI] [GO:0043049 "otic placode formation"
            evidence=IGI;IMP] [GO:0030916 "otic vesicle formation"
            evidence=IGI;IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-030505-1 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 EMBL:AY242057
            IPI:IPI00513327 UniGene:Dr.20969 ProteinModelPortal:Q7T2N8
            SMR:Q7T2N8 STRING:Q7T2N8 InParanoid:Q7T2N8 ArrayExpress:Q7T2N8
            Uniprot:Q7T2N8
        Length = 419

 Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
 Identities = 77/192 (40%), Positives = 108/192 (56%)

Query:    31 PQSGSTGTPLGGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACMGGINSY-NTALT 89
             P +  +G  LG +SS   S      MN P   ST    Y S+ N    GG  SY  +   
Sbjct:   101 PPAHPSGYGLGEYSSP--STNPYLWMNSPGITSTP---YLSSPN----GG--SYIQSGFG 149

Query:    90 TGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEI 149
             + + +        G+      +  + +  +   +PPYSY +LI MAIQN+  K LTLS+I
Sbjct:   150 SNQRQFLPPPTGFGSADLGWLSISSQQELFKMVRPPYSYSALIAMAIQNAQDKKLTLSQI 209

Query:   150 YQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFEN 209
             YQ++ D FPFY++++  WQNSIRH+LS NDCF KV R  D PGKG++WTL  +   MF+N
Sbjct:   210 YQYVADNFPFYKKSKAGWQNSIRHNLSLNDCFKKVARDEDDPGKGNYWTLDPNCEKMFDN 269

Query:   210 GCYLRRQKRFKD 221
             G + R++KR  D
Sbjct:   270 GNFRRKRKRRAD 281


>UNIPROTKB|E1BR13 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0042472 "inner ear morphogenesis" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0044212 "transcription regulatory region DNA binding"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0043565 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401 OMA:QAYGVQR
            EMBL:AADN02035926 IPI:IPI00594856 RefSeq:XP_425185.1
            Ensembl:ENSGALT00000003284 GeneID:427613 KEGG:gga:427613
            NextBio:20828832 Uniprot:E1BR13
        Length = 375

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   123 RPPYSYSALIAMAIHGAPEKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   183 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 221


>UNIPROTKB|E1BPY1 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:DAAA02049848 IPI:IPI00715575
            RefSeq:NP_001179172.1 UniGene:Bt.85445 Ensembl:ENSBTAT00000019467
            GeneID:539442 KEGG:bta:539442 NextBio:20877990 Uniprot:E1BPY1
        Length = 379

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   184 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 222


>UNIPROTKB|E2RRX4 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0042472 "inner ear morphogenesis" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0045944 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0044212
            GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299 KO:K09401
            OMA:QAYGVQR EMBL:AAEX03003020 RefSeq:XP_546245.2
            Ensembl:ENSCAFT00000026862 GeneID:489127 KEGG:cfa:489127
            Uniprot:E2RRX4
        Length = 378

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   184 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 222


>UNIPROTKB|Q12951 [details] [associations]
            symbol:FOXI1 "Forkhead box protein I1" species:9606 "Homo
            sapiens" [GO:0009790 "embryo development" evidence=NAS] [GO:0008301
            "DNA binding, bending" evidence=IBA;NAS] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0009957 "epidermal cell fate
            specification" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IDA] [GO:0005634
            "nucleus" evidence=IC] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0044212 "transcription regulatory region DNA
            binding" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0044212 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 EMBL:BC029778 EMBL:L13203 EMBL:AY707089 EMBL:U13224
            IPI:IPI00158273 IPI:IPI00220405 PIR:A47450 PIR:S51629
            RefSeq:NP_036320.2 RefSeq:NP_658982.1 UniGene:Hs.87236
            ProteinModelPortal:Q12951 SMR:Q12951 STRING:Q12951
            PhosphoSite:Q12951 DMDM:150421552 PRIDE:Q12951 DNASU:2299
            Ensembl:ENST00000306268 Ensembl:ENST00000449804 GeneID:2299
            KEGG:hsa:2299 UCSC:uc003mai.4 UCSC:uc003maj.4 CTD:2299
            GeneCards:GC05P169465 HGNC:HGNC:3815 MIM:601093 neXtProt:NX_Q12951
            Orphanet:705 PharmGKB:PA28232 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 InParanoid:Q12951 KO:K09401 OMA:QAYGVQR
            OrthoDB:EOG4XKV7D PhylomeDB:Q12951 GenomeRNAi:2299 NextBio:9331
            ArrayExpress:Q12951 Bgee:Q12951 CleanEx:HS_FOXI1
            Genevestigator:Q12951 GermOnline:ENSG00000168269 Uniprot:Q12951
        Length = 378

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   183 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 221


>UNIPROTKB|F1RR95 [details] [associations]
            symbol:FOXI1 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
            regulatory region DNA binding" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0042472 "inner
            ear morphogenesis" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0044212 GO:GO:0042472 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OMA:QAYGVQR EMBL:CU694271 RefSeq:XP_003134114.1
            Ensembl:ENSSSCT00000018521 GeneID:100511481 KEGG:ssc:100511481
            Uniprot:F1RR95
        Length = 378

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   184 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 222


>UNIPROTKB|Q6P8A3 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009957
            "epidermal cell fate specification" evidence=IBA] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=ISS] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISS] [GO:0048335 "negative regulation of mesodermal cell
            fate determination" evidence=ISS] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957 HSSP:Q99958
            GeneTree:ENSGT00690000101636 GO:GO:0042664 CTD:2299
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG4XKV7D
            GO:GO:0048335 EMBL:BC061326 RefSeq:NP_988949.1 UniGene:Str.2357
            ProteinModelPortal:Q6P8A3 SMR:Q6P8A3 STRING:Q6P8A3
            Ensembl:ENSXETT00000005340 GeneID:394546 KEGG:xtr:394546
            Xenbase:XB-GENE-494125 InParanoid:Q6P8A3 OMA:FYNTINA Bgee:Q6P8A3
            Uniprot:Q6P8A3
        Length = 373

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   183 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 221


>UNIPROTKB|Q7ZYQ0 [details] [associations]
            symbol:foxi1e "Forkhead box protein I1-ema" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0042664
            "negative regulation of endodermal cell fate specification"
            evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048335 "negative regulation of
            mesodermal cell fate determination" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0007275 GO:GO:0005634 GO:GO:0045893 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HSSP:Q99958 GO:GO:0042664 CTD:2299 HOVERGEN:HBG067944 KO:K09401
            EMBL:DQ026065 EMBL:BC042303 RefSeq:NP_001080367.1 UniGene:Xl.20089
            ProteinModelPortal:Q7ZYQ0 SMR:Q7ZYQ0 GeneID:380059 KEGG:xla:380059
            Xenbase:XB-GENE-494129 GO:GO:0048335 Uniprot:Q7ZYQ0
        Length = 373

 Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
 Identities = 57/99 (57%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P K LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   123 RPPYSYSALIAMAIHGAPDKRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 182

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   183 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 221


>ZFIN|ZDB-GENE-031126-4 [details] [associations]
            symbol:foxi3b "forkhead box I3b" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0043049 "otic
            placode formation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0006357 "regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IMP;IDA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 ZFIN:ZDB-GENE-031126-4 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:AY331584 IPI:IPI00500300
            RefSeq:NP_944600.1 UniGene:Dr.89473 ProteinModelPortal:Q7T1C0
            SMR:Q7T1C0 GeneID:387258 KEGG:dre:387258 CTD:387258
            InParanoid:Q7T1C0 NextBio:20814129 Uniprot:Q7T1C0
        Length = 383

 Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P + LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   130 RPPYSYSALIAMAIHGAPERRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 189

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D   E
Sbjct:   190 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSLPE 232


>FB|FBgn0004895 [details] [associations]
            symbol:fd64A "forkhead domain 64A" species:7227 "Drosophila
            melanogaster" [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=IC;NAS] [GO:0009790 "embryo development"
            evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0048665 "neuron fate specification" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0045665 "negative regulation of neuron
            differentiation" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0000122 "negative
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0009792 "embryo development ending in birth or
            egg hatching" evidence=IBA] [GO:0045787 "positive regulation of
            cell cycle" evidence=IBA] [GO:0009953 "dorsal/ventral pattern
            formation" evidence=IBA] [GO:0007380 "specification of segmental
            identity, head" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 EMBL:AE014296 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0009953 GO:GO:0008134 GO:GO:0048665
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            eggNOG:COG5025 GO:GO:0007380 GO:GO:0009888 EMBL:M96441 PIR:B46178
            RefSeq:NP_001246609.1 RefSeq:NP_523912.1 UniGene:Dm.23970
            ProteinModelPortal:Q02360 SMR:Q02360 DIP:DIP-19169N IntAct:Q02360
            MINT:MINT-290862 STRING:Q02360 EnsemblMetazoa:FBtr0073192
            EnsemblMetazoa:FBtr0309789 GeneID:38471 KEGG:dme:Dmel_CG1132
            CTD:38471 FlyBase:FBgn0004895 GeneTree:ENSGT00690000101636
            InParanoid:Q02360 KO:K09411 OMA:PNYSDRI OrthoDB:EOG47D7XZ
            PhylomeDB:Q02360 GenomeRNAi:38471 NextBio:808831 Bgee:Q02360
            GermOnline:CG1132 Uniprot:Q02360
        Length = 365

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 61/107 (57%), Positives = 77/107 (71%)

Query:   118 SYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSF 177
             S+   KPP+SYI+LI MAI ++P + LTLS IY+FIMD FP+YR+N+Q WQNSIRH+LS 
Sbjct:    86 SHRPEKPPFSYIALIAMAISSAPNQRLTLSGIYKFIMDKFPYYRENKQGWQNSIRHNLSL 145

Query:   178 NDCFVKVPRTP------DKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             NDCFVK+PR        D  GKGS+W L   + +MFE G Y RR+ R
Sbjct:   146 NDCFVKIPRDKNTIEDNDSAGKGSYWMLDSSASDMFEQGNYRRRRTR 192


>ZFIN|ZDB-GENE-031126-3 [details] [associations]
            symbol:foxi3a "forkhead box I3a" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0005667 "transcription factor
            complex" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0006357 "regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003690 "double-stranded
            DNA binding" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0009913 "epidermal cell differentiation"
            evidence=IMP] [GO:0009957 "epidermal cell fate specification"
            evidence=IDA;IMP] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0030104 "water homeostasis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-031126-3 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0030104 GO:GO:0051090 GO:GO:0043049 GO:GO:0009957 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:AY331583 IPI:IPI00845088 UniGene:Dr.29102
            ProteinModelPortal:Q7T1C1 SMR:Q7T1C1 STRING:Q7T1C1 PRIDE:Q7T1C1
            InParanoid:Q7T1C1 Bgee:Q7T1C1 Uniprot:Q7T1C1
        Length = 353

 Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
 Identities = 55/103 (53%), Positives = 76/103 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P + +TLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF+
Sbjct:   116 RPPYSYSALIAMAIHGAPNRRVTLSQIYQYVADNFPFYNKSKASWQNSIRHNLSLNDCFM 175

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             KVPR    PGKG++WTL  +   MF+NG + R++KR  D + E
Sbjct:   176 KVPRDDSDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSDSQAE 218


>UNIPROTKB|Q4H3I4 [details] [associations]
            symbol:Ci-FoxI-c "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 KO:K09401 EMBL:AB210438
            RefSeq:NP_001071713.1 UniGene:Cin.33229 ProteinModelPortal:Q4H3I4
            SMR:Q4H3I4 GeneID:778616 KEGG:cin:778616 CTD:778616
            HOGENOM:HOG000169943 HOVERGEN:HBG086629 InParanoid:Q4H3I4
            Uniprot:Q4H3I4
        Length = 581

 Score = 326 (119.8 bits), Expect = 8.8e-29, P = 8.8e-29
 Identities = 68/158 (43%), Positives = 94/158 (59%)

Query:    64 TGSMGYSSNMNAACMGGINS--YNTALTTGRAELAENSPSPGALQRVARADKTYRRS-YT 120
             T +MG  SN        + S  Y  A     A   +   +PG     A    + +   + 
Sbjct:   196 TATMGAGSNPYNPATSYMQSATYGAAAAAAAAGQRQFFGAPGFSSDFAWLSLSSQSELFK 255

Query:   121 HAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDC 180
               +PPYSY +LI MAIQNSP K LTLS+IYQ++ + FPFY++++  WQNSIRH+LS NDC
Sbjct:   256 MVRPPYSYSALIAMAIQNSPEKKLTLSQIYQYVAENFPFYKKSRAGWQNSIRHNLSLNDC 315

Query:   181 FVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             F KV R  D PGKG++W+L  +   MF+NG + R++KR
Sbjct:   316 FKKVARDEDDPGKGNYWSLDPNCEKMFDNGNFRRKRKR 353


>UNIPROTKB|F1NK07 [details] [associations]
            symbol:F1NK07 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00690000101636 EMBL:AADN02014756 IPI:IPI00576473
            Ensembl:ENSGALT00000037124 OMA:SLIYARE Uniprot:F1NK07
        Length = 347

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 71/181 (39%), Positives = 103/181 (56%)

Query:    41 GGFSSNMHSMGSINGMNGPNCMSTGSMGYSSNMNAACMGGINSYNTALTTGR---AELAE 97
             GG +    + G + GMN P     G  G  +   AA      +++     G+   +    
Sbjct:     1 GGTTGAPANAGYLWGMNSPAPYLQGPPGSGA---AASPFQPPAWDDCSRGGQLVGSPSGP 57

Query:    98 NSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLF 157
              SPS G  +    +  +        +PPYSY +LI MAIQ++P + LTLS IYQ++ + F
Sbjct:    58 GSPSAGGAELSWLSLASQEELLKLVRPPYSYSALIAMAIQSAPERKLTLSHIYQYVAENF 117

Query:   158 PFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQK 217
             PFY++++  WQNSIRH+LS NDCF KVPR  D PGKG++WTL  +   MF+NG + R++K
Sbjct:   118 PFYKRSKAGWQNSIRHNLSLNDCFRKVPRDEDDPGKGNYWTLFPNCEKMFDNGNFRRKRK 177

Query:   218 R 218
             R
Sbjct:   178 R 178


>MGI|MGI:1096329 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISO] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IC] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IMP] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IDA] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IDA]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=ISO;IDA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:1096329 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0044212
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 EMBL:AL671971 GO:GO:0009957
            GeneTree:ENSGT00690000101636 CTD:2299 HOGENOM:HOG000236333
            HOVERGEN:HBG067944 KO:K09401 OMA:QAYGVQR OrthoDB:EOG4XKV7D
            EMBL:AK019994 EMBL:BC007475 IPI:IPI00187526 RefSeq:NP_076396.3
            UniGene:Mm.32926 ProteinModelPortal:Q922I5 SMR:Q922I5 STRING:Q922I5
            PhosphoSite:Q922I5 PRIDE:Q922I5 Ensembl:ENSMUST00000060271
            GeneID:14233 KEGG:mmu:14233 UCSC:uc007ikw.1 InParanoid:Q922I5
            NextBio:285511 Bgee:Q922I5 CleanEx:MM_FOXI1 Genevestigator:Q922I5
            GermOnline:ENSMUSG00000047861 Uniprot:Q922I5
        Length = 372

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 56/99 (56%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P + LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   117 RPPYSYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 176

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   177 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 215


>RGD|1307421 [details] [associations]
            symbol:Foxi1 "forkhead box I1" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043049
            "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA;ISO] [GO:0044212
            "transcription regulatory region DNA binding" evidence=IEA;ISO]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1307421 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0044212 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 EMBL:CH473948 GO:GO:0051090
            GO:GO:0043049 GO:GO:0009957 GeneTree:ENSGT00690000101636 CTD:2299
            KO:K09401 OrthoDB:EOG4XKV7D OMA:FYNTINA IPI:IPI00368760
            RefSeq:NP_001099246.1 UniGene:Rn.32116 Ensembl:ENSRNOT00000009058
            GeneID:287185 KEGG:rno:287185 UCSC:RGD:1307421 NextBio:625680
            Uniprot:D4A7G2
        Length = 372

 Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
 Identities = 56/99 (56%), Positives = 74/99 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAI  +P + LTLS+IYQ++ D FPFY +++  WQNSIRH+LS NDCF 
Sbjct:   117 RPPYSYSALIAMAIHGAPDQRLTLSQIYQYVADNFPFYNKSKAGWQNSIRHNLSLNDCFK 176

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKD 221
             KVPR  D PGKG++WTL  +   MF+NG + R++KR  D
Sbjct:   177 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKRKSD 215


>UNIPROTKB|E1BN87 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            KO:K09401 CTD:399823 OMA:IYQYVAG EMBL:DAAA02059569 IPI:IPI00706262
            RefSeq:NP_001179878.1 UniGene:Bt.106534 Ensembl:ENSBTAT00000008160
            GeneID:613373 KEGG:bta:613373 NextBio:20898544 Uniprot:E1BN87
        Length = 312

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 55/96 (57%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++++  WQNSIRH+LS NDCF 
Sbjct:    97 RPPYSYSALIAMAIQSAPRRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 156

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   157 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 192


>UNIPROTKB|Q6ZQN5 [details] [associations]
            symbol:FOXI2 "Forkhead box protein I2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0008134 GO:GO:0007389
            GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            EMBL:AL391005 EMBL:AK128865 IPI:IPI00400893 RefSeq:NP_997309.2
            UniGene:Hs.449674 ProteinModelPortal:Q6ZQN5 SMR:Q6ZQN5
            STRING:Q6ZQN5 PhosphoSite:Q6ZQN5 DMDM:182705226 PRIDE:Q6ZQN5
            Ensembl:ENST00000388920 GeneID:399823 KEGG:hsa:399823
            UCSC:uc009yas.2 CTD:399823 GeneCards:GC10P129535 HGNC:HGNC:32448
            neXtProt:NX_Q6ZQN5 PharmGKB:PA162388813 InParanoid:Q6ZQN5
            OMA:IYQYVAG GenomeRNAi:399823 NextBio:105603 ArrayExpress:Q6ZQN5
            Bgee:Q6ZQN5 CleanEx:HS_FOXI2 Genevestigator:Q6ZQN5 Uniprot:Q6ZQN5
        Length = 318

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 55/96 (57%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   102 RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 161

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   162 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 197


>UNIPROTKB|F1SDK7 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            OMA:IYQYVAG EMBL:CU571233 Ensembl:ENSSSCT00000011764 Uniprot:F1SDK7
        Length = 328

 Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
 Identities = 55/96 (57%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   113 RPPYSYSALIAMAIQSAPLRKLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 172

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++KR
Sbjct:   173 KVPRDEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 208


>UNIPROTKB|Q28HT3 [details] [associations]
            symbol:foxi2 "Forkhead box protein I2" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025 HOVERGEN:HBG067944
            KO:K09401 CTD:399823 EMBL:CR760754 RefSeq:NP_001016544.1
            UniGene:Str.6457 ProteinModelPortal:Q28HT3 SMR:Q28HT3 GeneID:549298
            KEGG:xtr:549298 Xenbase:XB-GENE-982122 Uniprot:Q28HT3
        Length = 368

 Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
 Identities = 57/103 (55%), Positives = 77/103 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY SLI MAIQN+P K LTLS+IY ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSSLIAMAIQNNPEKKLTLSQIYSYVAENFPFYKKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKE 225
             KV R  + PGKG++WTL  +   MF+NG + R++KR K +  E
Sbjct:   184 KVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKR-KSESVE 225


>UNIPROTKB|Q70VZ4 [details] [associations]
            symbol:foxL "FoxL protein" species:7719 "Ciona
            intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IBA] [GO:0006917 "induction of apoptosis" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0009790
            "embryo development" evidence=IBA] [GO:0009888 "tissue development"
            evidence=IBA] [GO:0030331 "estrogen receptor binding" evidence=IBA]
            [GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IBA]
            [GO:0043028 "cysteine-type endopeptidase regulator activity
            involved in apoptotic process" evidence=IBA] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0006917 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0043280 GO:GO:0006309 GO:GO:0008134 GO:GO:0007389
            GO:GO:0030331 GO:GO:0051090 GO:GO:0048513 GO:GO:0009888 HSSP:Q01167
            KO:K09405 GO:GO:0043028 GO:GO:0031624 EMBL:AJ534400
            RefSeq:NP_001027769.1 UniGene:Cin.15633 ProteinModelPortal:Q70VZ4
            SMR:Q70VZ4 GeneID:445798 KEGG:cin:445798 CTD:445798
            HOGENOM:HOG000204706 InParanoid:Q70VZ4 Uniprot:Q70VZ4
        Length = 387

 Score = 313 (115.2 bits), Expect = 5.0e-28, P = 5.0e-28
 Identities = 61/110 (55%), Positives = 81/110 (73%)

Query:   111 ADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNS 170
             ++K   ++ T  KPPYSY++LI MAI++S  K LTLS IYQ+I+D FPFY +N++ WQNS
Sbjct:   115 SEKDPEKNRTQ-KPPYSYVALIAMAIRDSNEKKLTLSGIYQYIVDKFPFYEKNRKGWQNS 173

Query:   171 IRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             IRH+LS N+CFVKVPR      KG+FW L  +  +MFENG Y RR++R K
Sbjct:   174 IRHNLSLNECFVKVPREGGGERKGNFWMLDSNCEDMFENGNY-RRRRRMK 222


>UNIPROTKB|Q5NDM2 [details] [associations]
            symbol:foxi2-a "Forkhead box protein I2-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:AJ868112 RefSeq:NP_001089009.1 UniGene:Xl.10052
            ProteinModelPortal:Q5NDM2 SMR:Q5NDM2 GeneID:496395 KEGG:xla:496395
            CTD:496395 Xenbase:XB-GENE-982127 Uniprot:Q5NDM2
        Length = 369

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 55/96 (57%), Positives = 73/96 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY SLI MAIQN+P K LTLS+IY ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSSLIAMAIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KV R    PGKG++WTL  +   MF+NG + R++KR
Sbjct:   184 KVARDDHDPGKGNYWTLDPNCEKMFDNGNFRRKRKR 219


>UNIPROTKB|Q63ZH2 [details] [associations]
            symbol:foxi2-b "Forkhead box protein I2-B" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 HOVERGEN:HBG067944 KO:K09401
            EMBL:BC082945 RefSeq:NP_001088107.1 UniGene:Xl.7242
            ProteinModelPortal:Q63ZH2 SMR:Q63ZH2 GeneID:494806 KEGG:xla:494806
            CTD:494806 Xenbase:XB-GENE-6255082 Uniprot:Q63ZH2
        Length = 367

 Score = 312 (114.9 bits), Expect = 6.4e-28, P = 6.4e-28
 Identities = 56/105 (53%), Positives = 78/105 (74%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY SLI M+IQN+P K LTLS+IY ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   124 RPPYSYSSLIAMSIQNTPDKKLTLSQIYNYVAENFPFYKKSKAGWQNSIRHNLSLNDCFK 183

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFKDDKKEVI 227
             KV R  + PGKG++WTL  +   MF+NG + R++KR    K E++
Sbjct:   184 KVARDDNDPGKGNYWTLDPNCEKMFDNGNFRRKRKR----KSEIV 224


>UNIPROTKB|Q6P2Z3 [details] [associations]
            symbol:foxi1 "Forkhead box protein I1" species:8364
            "Xenopus (Silurana) tropicalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0007398 "ectoderm development" evidence=ISS] [GO:0008134
            "transcription factor binding" evidence=IBA] [GO:0008301 "DNA
            binding, bending" evidence=IBA] [GO:0009957 "epidermal cell fate
            specification" evidence=IBA] [GO:0043049 "otic placode formation"
            evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] [GO:0048264 "determination of ventral
            identity" evidence=ISS] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045893 GO:GO:0007399 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0048264 GO:GO:0008134
            GO:GO:0007398 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HSSP:Q99958 GeneTree:ENSGT00690000101636
            HOGENOM:HOG000236333 HOVERGEN:HBG067944 KO:K09401 EMBL:CR761756
            EMBL:BC064241 RefSeq:NP_989265.1 UniGene:Str.16160
            ProteinModelPortal:Q6P2Z3 SMR:Q6P2Z3 STRING:Q6P2Z3
            Ensembl:ENSXETT00000004118 GeneID:394878 KEGG:xtr:394878 CTD:394878
            Xenbase:XB-GENE-487658 InParanoid:Q6P2Z3 OrthoDB:EOG457573
            Bgee:Q6P2Z3 Uniprot:Q6P2Z3
        Length = 363

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 58/125 (46%), Positives = 85/125 (68%)

Query:    98 NSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLF 157
             NSP+ G  +    +  +        +PPYSY +LI MAIQ++  + LTLS+IYQ++ + F
Sbjct:   100 NSPAFGGTELSWMSAASQEELLKMVRPPYSYSALIAMAIQHASDRRLTLSQIYQYVAENF 159

Query:   158 PFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQK 217
             PFY++++  WQNSIRH+LS NDCF KVPR  + PGKG++WTL  +   MF+NG + RR++
Sbjct:   160 PFYKKSKAGWQNSIRHNLSLNDCFKKVPRDENDPGKGNYWTLDPNCEKMFDNGNF-RRKR 218

Query:   218 RFKDD 222
             + K D
Sbjct:   219 KPKSD 223


>MGI|MGI:3028075 [details] [associations]
            symbol:Foxi2 "forkhead box I2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009957 "epidermal cell fate specification" evidence=IBA]
            [GO:0043049 "otic placode formation" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 MGI:MGI:3028075 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HOVERGEN:HBG067944 KO:K09401 OrthoDB:EOG457573
            CTD:399823 EMBL:DQ078268 EMBL:AK045276 EMBL:BC096623
            IPI:IPI00222159 RefSeq:NP_899016.1 UniGene:Mm.132547
            ProteinModelPortal:Q3I5G5 SMR:Q3I5G5 STRING:Q3I5G5
            PhosphoSite:Q3I5G5 PRIDE:Q3I5G5 GeneID:270004 KEGG:mmu:270004
            InParanoid:Q3I5G5 NextBio:393154 Bgee:Q3I5G5 CleanEx:MM_FOXI2
            Genevestigator:Q3I5G5 Uniprot:Q3I5G5
        Length = 311

 Score = 310 (114.2 bits), Expect = 1.0e-27, P = 1.0e-27
 Identities = 53/96 (55%), Positives = 75/96 (78%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++++  WQNSIRH+LS NDCF 
Sbjct:    99 RPPYSYSALIAMAIQSAPLRRLTLSQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 158

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  + PGKG++WTL  +   MF+NG + R+++R
Sbjct:   159 KVPRDENDPGKGNYWTLDPNCEKMFDNGNFRRKRRR 194


>UNIPROTKB|Q91904 [details] [associations]
            symbol:foxi1-a "Forkhead box protein I1-A" species:8355
            "Xenopus laevis" [GO:0005634 "nucleus" evidence=IDA] [GO:0007398
            "ectoderm development" evidence=IMP] [GO:0043565 "sequence-specific
            DNA binding" evidence=IDA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 EMBL:X74315 EMBL:BC080044 PIR:S49008
            RefSeq:NP_001081617.1 UniGene:Xl.5369 ProteinModelPortal:Q91904
            SMR:Q91904 GeneID:397954 KEGG:xla:397954 CTD:397954
            Xenbase:XB-GENE-865722 Uniprot:Q91904
        Length = 370

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 70/207 (33%), Positives = 111/207 (53%)

Query:    24 SVINSCSPQSGSTGTPLGGFSSN-MHSMGSINGMNGPNCMSTGSMGYSSNMNAACMG-GI 81
             S +N   P+       +G +  N M+   +++  +     S G   + +N      G G+
Sbjct:    15 SSLNPPHPKRAQEAPDMGLYCDNFMYQQHNLHPSHRATNFSIGDFTHQANPYLWLGGPGV 74

Query:    82 N---SYNT--------ALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYIS 130
             N   SY+         A +  + +   NS + G       +  +        +PPYSY +
Sbjct:    75 NNSPSYSPTPAPYIPPAFSAPQRQFLANSAAFGGADLGWMSAASQEELLKRVRPPYSYSA 134

Query:   131 LITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDK 190
             LI M+IQN+  K LTLS+IYQ++ + FPFY++++  WQNSIRH+LS NDCF K+PR  + 
Sbjct:   135 LIAMSIQNATDKRLTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKMPRDEND 194

Query:   191 PGKGSFWTLHKDSGNMFENGCYLRRQK 217
             PGKG++WTL  +   MF+NG + R++K
Sbjct:   195 PGKGNYWTLDSNCEKMFDNGNFRRKRK 221


>UNIPROTKB|Q91905 [details] [associations]
            symbol:foxi1-b "Forkhead box protein I1-B" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0007398 "ectoderm
            development" evidence=IMP] [GO:0043565 "sequence-specific DNA
            binding" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0048264
            "determination of ventral identity" evidence=IMP]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0045893 GO:GO:0007399 GO:GO:0030154
            GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0048264 GO:GO:0007398 HSSP:Q99958
            HOVERGEN:HBG067944 KO:K09401 EMBL:X74316 EMBL:BC078036 PIR:C56556
            PIR:S49009 RefSeq:NP_001081619.1 UniGene:Xl.34912
            ProteinModelPortal:Q91905 SMR:Q91905 GeneID:397955 KEGG:xla:397955
            CTD:397955 Xenbase:XB-GENE-6252155 Uniprot:Q91905
        Length = 367

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 53/95 (55%), Positives = 74/95 (77%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQN+  K LTLS+IYQ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   128 RPPYSYSALIAMAIQNASDKRLTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFK 187

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQK 217
             K+PR  + PGKG++WTL  +   MF+NG + R++K
Sbjct:   188 KMPRDENDPGKGNYWTLDSNCEKMFDNGNFRRKRK 222


>UNIPROTKB|F1NNW9 [details] [associations]
            symbol:F1NNW9 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:FATGCES EMBL:AADN02023892 IPI:IPI00818635
            Ensembl:ENSGALT00000041045 Uniprot:F1NNW9
        Length = 152

 Score = 306 (112.8 bits), Expect = 2.8e-27, P = 2.8e-27
 Identities = 64/132 (48%), Positives = 85/132 (64%)

Query:    91 GRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIY 150
             G +  + N+P P    + +  +K + R      P YSYI+LI MAIQ SP+  +TLS IY
Sbjct:    26 GESSKSSNTPPPRPPSQNSDEEKKFTR------PAYSYIALIAMAIQQSPSNKVTLSGIY 79

Query:   151 QFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTP-DKPGKGSFWTLHKDSGNM--- 206
              FIM  FP+YR NQ+ WQNSIRH+LS N CFVKVPRT  ++ GKG++W+      +M   
Sbjct:    80 DFIMKKFPYYRSNQRAWQNSIRHNLSLNSCFVKVPRTEGNEKGKGNYWSFATGCESMLDL 139

Query:   207 FENGCYLRRQKR 218
             FENG Y RR++R
Sbjct:   140 FENGNYRRRRRR 151


>MGI|MGI:2443432 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0019904 "protein domain specific
            binding" evidence=IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:2443432 GO:GO:0019904 GO:GO:0045893 GO:GO:0043565
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0007389 GO:GO:0051090 GO:GO:0048513
            eggNOG:COG5025 GO:GO:0009888 GeneTree:ENSGT00700000104094
            HOGENOM:HOG000231184 HOVERGEN:HBG051648 KO:K09403 CTD:22887
            OMA:MSQQHMM OrthoDB:EOG4MCX01 EMBL:AK082840 EMBL:AK129271
            EMBL:AK139508 EMBL:AL645563 EMBL:BC058231 IPI:IPI00225578
            IPI:IPI00417077 RefSeq:NP_766287.1 UniGene:Mm.259227
            ProteinModelPortal:Q8BUR3 SMR:Q8BUR3 STRING:Q8BUR3
            PhosphoSite:Q8BUR3 PRIDE:Q8BUR3 Ensembl:ENSMUST00000044564
            Ensembl:ENSMUST00000106310 GeneID:230700 KEGG:mmu:230700
            UCSC:uc008umt.1 UCSC:uc008umu.1 InParanoid:A2AA37 NextBio:380061
            Bgee:Q8BUR3 CleanEx:MM_FOXJ3 Genevestigator:Q8BUR3
            GermOnline:ENSMUSG00000032998 Uniprot:Q8BUR3
        Length = 623

 Score = 294 (108.6 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 67/172 (38%), Positives = 97/172 (56%)

Query:    55 GMNGPNCMSTGSMGYSSNMNAAC--MGGINSYNTALTTGRAELAENSPSPGALQRVARAD 112
             G+ G  C S  S+  +S + ++   M  +          +++  +N+   G  ++ A  D
Sbjct:     2 GLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALLD 61

Query:   113 KTYR------RSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQR 166
                       + +   KPPYSY SLIT AI +SP K +TLSEIYQ+I D FP+YR+    
Sbjct:    62 PNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSG 121

Query:   167 WQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             W+NSIRH+LS N CF+KVPR+ D PGKGS+W +  D+ N  E+    R +KR
Sbjct:   122 WKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI--DT-NPKEDTLPTRPKKR 170

 Score = 42 (19.8 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query:   305 QNSYHQSFH-QQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFP 356
             Q   H + H QQ S+L    +    HP   P  H  HH   ++   A   P P
Sbjct:   396 QRPQHPAPHPQQHSQLQPPHSQ---HPP--PHQHIQHHPNHQHQTLAHQPPPP 443


>UNIPROTKB|B3FNS2 [details] [associations]
            symbol:B3FNS2 "FoxG" species:7668 "Strongylocentrotus
            purpuratus" [GO:0002052 "positive regulation of neuroblast
            proliferation" evidence=IBA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IBA] [GO:0045787 "positive regulation of cell cycle"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0009792 GO:GO:0007346
            GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0009953 GO:GO:0008134
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            eggNOG:COG5025 GO:GO:0009888 KO:K09385 EMBL:EU307288
            RefSeq:NP_001123284.1 UniGene:Spu.14544 GeneID:583688
            KEGG:spu:583688 CTD:583688 Uniprot:B3FNS2
        Length = 507

 Score = 293 (108.2 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 58/103 (56%), Positives = 74/103 (71%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             R  Y   KPP+SY +LI MAI++SP K LTL+ IY++IM  FP+YR+N+Q WQNSIRH+L
Sbjct:   181 RNKYGE-KPPFSYNALIMMAIRSSPEKRLTLNGIYEYIMTNFPYYRENKQGWQNSIRHNL 239

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   240 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 282

 Score = 37 (18.1 bits), Expect = 3.3e-27, Sum P(2) = 3.3e-27
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:   325 SGRCHPHL 332
             SG C+PHL
Sbjct:   454 SGCCYPHL 461


>UNIPROTKB|F1P7X0 [details] [associations]
            symbol:FOXI2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00690000101636
            KO:K09401 CTD:399823 OMA:IYQYVAG EMBL:AAEX03015648
            RefSeq:XP_854369.2 Ensembl:ENSCAFT00000020834 GeneID:611594
            KEGG:cfa:611594 Uniprot:F1P7X0
        Length = 320

 Score = 305 (112.4 bits), Expect = 3.5e-27, P = 3.5e-27
 Identities = 52/96 (54%), Positives = 73/96 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI M IQ++P + LTL +IYQ++   FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   117 RPPYSYSALIAMPIQSAPRRRLTLCQIYQYVAGNFPFYKRSKAGWQNSIRHNLSLNDCFK 176

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  D PGKG++WTL  +   MF+NG + R++K+
Sbjct:   177 KVPREEDDPGKGNYWTLDPNCEKMFDNGNFRRKRKK 212


>UNIPROTKB|Q4H3I5 [details] [associations]
            symbol:Ci-FoxI-b "Transcription factor protein"
            species:7719 "Ciona intestinalis" [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003705 "RNA polymerase II distal
            enhancer sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009653 "anatomical structure morphogenesis" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0048513 "organ development"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0009790 GO:GO:0003690
            GO:GO:0008134 GO:GO:0009653 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 eggNOG:COG5025 GO:GO:0009888 KO:K09401
            HOGENOM:HOG000169943 HOVERGEN:HBG086629 EMBL:AB210437
            RefSeq:NP_001071712.1 UniGene:Cin.27236 ProteinModelPortal:Q4H3I5
            SMR:Q4H3I5 GeneID:778615 KEGG:cin:778615 CTD:778615
            InParanoid:Q4H3I5 Uniprot:Q4H3I5
        Length = 466

 Score = 306 (112.8 bits), Expect = 4.2e-27, P = 4.2e-27
 Identities = 55/96 (57%), Positives = 72/96 (75%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQNS  K LTLS IY ++ + FPFY++++  WQNSIRH+LS NDCF 
Sbjct:   143 RPPYSYSALIAMAIQNSKEKKLTLSSIYLYVAENFPFYKRSRAGWQNSIRHNLSLNDCFK 202

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KV R  D PGKG++W+L  +   MF+NG + RR+KR
Sbjct:   203 KVARDEDDPGKGNYWSLDPNCEKMFDNGNFRRRRKR 238


>RGD|621739 [details] [associations]
            symbol:Foxi2 "forkhead box I2" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA;TAS] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009957 "epidermal cell fate specification"
            evidence=IBA] [GO:0043049 "otic placode formation" evidence=IBA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0051090 "regulation of sequence-specific DNA binding
            transcription factor activity" evidence=IBA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 RGD:621739
            GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0008301 GO:GO:0003690 GO:GO:0008134
            GO:GO:0007389 GO:GO:0051090 GO:GO:0043049 eggNOG:COG5025
            GO:GO:0009957 HOGENOM:HOG000236333 OrthoDB:EOG457573 EMBL:L13205
            IPI:IPI00366083 PIR:I60919 UniGene:Rn.92429
            ProteinModelPortal:Q63248 SMR:Q63248 STRING:Q63248
            PhosphoSite:Q63248 PRIDE:Q63248 UCSC:RGD:621739 InParanoid:Q63248
            ArrayExpress:Q63248 Genevestigator:Q63248
            GermOnline:ENSRNOG00000018917 Uniprot:Q63248
        Length = 101

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 52/96 (54%), Positives = 73/96 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++ +  WQNSIRH+LS NDCF 
Sbjct:     3 RPPYSYSALIAMAIQSAPRRRLTLSQIYQYVAGNFPFYKRTKAGWQNSIRHNLSLNDCFK 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  + PGKG++W L  +   MF+NG + R+++R
Sbjct:    63 KVPRDENDPGKGNYWMLDPNCEKMFDNGNFRRKRRR 98


>UNIPROTKB|Q63248 [details] [associations]
            symbol:Foxi2 "Forkhead box protein I2" species:10116
            "Rattus norvegicus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:621739 GO:GO:0043565 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0043049 eggNOG:COG5025 GO:GO:0009957 HOGENOM:HOG000236333
            OrthoDB:EOG457573 EMBL:L13205 IPI:IPI00366083 PIR:I60919
            UniGene:Rn.92429 ProteinModelPortal:Q63248 SMR:Q63248 STRING:Q63248
            PhosphoSite:Q63248 PRIDE:Q63248 UCSC:RGD:621739 InParanoid:Q63248
            ArrayExpress:Q63248 Genevestigator:Q63248
            GermOnline:ENSRNOG00000018917 Uniprot:Q63248
        Length = 101

 Score = 303 (111.7 bits), Expect = 5.7e-27, P = 5.7e-27
 Identities = 52/96 (54%), Positives = 73/96 (76%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             +PPYSY +LI MAIQ++P + LTLS+IYQ++   FPFY++ +  WQNSIRH+LS NDCF 
Sbjct:     3 RPPYSYSALIAMAIQSAPRRRLTLSQIYQYVAGNFPFYKRTKAGWQNSIRHNLSLNDCFK 62

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             KVPR  + PGKG++W L  +   MF+NG + R+++R
Sbjct:    63 KVPRDENDPGKGNYWMLDPNCEKMFDNGNFRRKRRR 98


>MGI|MGI:1349428 [details] [associations]
            symbol:Foxl2 "forkhead box L2" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0001541 "ovarian follicle
            development" evidence=ISO;IMP] [GO:0002074 "extraocular skeletal
            muscle development" evidence=ISO;IBA] [GO:0003677 "DNA binding"
            evidence=ISO;IDA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IDA;TAS] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0006309 "apoptotic DNA fragmentation" evidence=ISO;IBA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=TAS] [GO:0006917 "induction of apoptosis" evidence=IDA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0019101
            "female somatic sex determination" evidence=IMP] [GO:0030154 "cell
            differentiation" evidence=IEA] [GO:0030331 "estrogen receptor
            binding" evidence=IPI] [GO:0031624 "ubiquitin conjugating enzyme
            binding" evidence=ISO;IBA] [GO:0042703 "menstruation"
            evidence=ISO;IBA] [GO:0043028 "cysteine-type endopeptidase
            regulator activity involved in apoptotic process" evidence=ISO;IBA]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=ISO] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process"
            evidence=ISO;IBA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IDA]
            [GO:0048048 "embryonic eye morphogenesis" evidence=IMP] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0060014 "granulosa cell
            differentiation" evidence=IMP] [GO:0060026 "convergent extension"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 MGI:MGI:1349428 GO:GO:0006917 GO:GO:0043565
            GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667
            GO:GO:0003705 GO:GO:0000122 GO:GO:0008301 GO:GO:0003690
            GO:GO:0043280 GO:GO:0001541 GO:GO:0006309 GO:GO:0008134
            GO:GO:0048048 GO:GO:0007389 GO:GO:0060026 GO:GO:0051090
            GO:GO:0002074 GO:GO:0060014 eggNOG:COG5025 GO:GO:0019101 KO:K09405
            CTD:668 HOGENOM:HOG000218632 HOVERGEN:HBG051651 OMA:QPAELSM
            GO:GO:0043028 GO:GO:0031624 GO:GO:0042703 EMBL:AF522275
            EMBL:AF060873 IPI:IPI00230400 RefSeq:NP_036150.1 UniGene:Mm.151239
            ProteinModelPortal:O88470 SMR:O88470 IntAct:O88470 STRING:O88470
            PhosphoSite:O88470 PRIDE:O88470 Ensembl:ENSMUST00000051312
            GeneID:26927 KEGG:mmu:26927 InParanoid:O88470 OrthoDB:EOG4B5P7G
            NextBio:304821 Bgee:O88470 CleanEx:MM_FOXL2 Genevestigator:O88470
            GermOnline:ENSMUSG00000050397 Uniprot:O88470
        Length = 375

 Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
 Identities = 65/133 (48%), Positives = 84/133 (63%)

Query:    90 TGRA--ELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLS 147
             +GRA  E   + PSPG          T  +     KPPYSY++LI MAI+ S  K LTLS
Sbjct:    20 SGRAVKEAEASPPSPGK-----GGGTTPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLS 74

Query:   148 EIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMF 207
              IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+KVPR      KG++WTL     +MF
Sbjct:    75 GIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMF 134

Query:   208 ENGCYLRRQKRFK 220
             E G Y RR++R K
Sbjct:   135 EKGNY-RRRRRMK 146


>UNIPROTKB|Q4H3J0 [details] [associations]
            symbol:Ci-FoxF "Transcription factor protein" species:7719
            "Ciona intestinalis" [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009790 "embryo development" evidence=IBA] [GO:0009888 "tissue
            development" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            eggNOG:COG5025 GO:GO:0009888 EMBL:AB210432 RefSeq:NP_001071710.1
            UniGene:Cin.22786 ProteinModelPortal:Q4H3J0 SMR:Q4H3J0
            GeneID:778611 KEGG:cin:778611 CTD:589400 HOGENOM:HOG000169903
            InParanoid:Q4H3J0 Uniprot:Q4H3J0
        Length = 575

 Score = 307 (113.1 bits), Expect = 1.0e-26, P = 1.0e-26
 Identities = 68/179 (37%), Positives = 103/179 (57%)

Query:    44 SSNMHSMGSING-MNG-PNCMSTGSMGYSSNMNAACMGGINSYNTALTTGRAELAENSPS 101
             + N ++  S  G M+G  + MS GS    +  +   +G ++       +   E ++++  
Sbjct:   138 NENANNNNSAEGVMDGNTSAMSDGSNADLAVEHNLSIGAVSGAPETPPSTEEEGSDSTNG 197

Query:   102 PGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYR 161
              G  ++       +RR     KPPYSYI+LI MAIQ+SP K LTLSEIY F+   F F+R
Sbjct:   198 SGGKKQDNGGALGHRRP---EKPPYSYIALIVMAIQSSPAKKLTLSEIYNFLQTRFEFFR 254

Query:   162 QNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
                Q W+NS+RH+LS N+CF+K+P+   +PGKG +WT+   S  MFE G + RR + F+
Sbjct:   255 GAYQGWKNSVRHNLSLNECFIKLPKGLGRPGKGHYWTIDPASEFMFEEGSFRRRPRGFR 313


>UNIPROTKB|Q8MIP2 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:9925 "Capra
            hircus" [GO:0001541 "ovarian follicle development"
            evidence=IEP;ISS] [GO:0002074 "extraocular skeletal muscle
            development" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0006309 "apoptotic DNA fragmentation" evidence=ISS] [GO:0006917
            "induction of apoptosis" evidence=ISS] [GO:0008210 "estrogen
            metabolic process" evidence=NAS] [GO:0019101 "female somatic sex
            determination" evidence=ISS] [GO:0042703 "menstruation"
            evidence=ISS] [GO:0043028 "cysteine-type endopeptidase regulator
            activity involved in apoptotic process" evidence=ISS] [GO:0043065
            "positive regulation of apoptotic process" evidence=ISS]
            [GO:0043280 "positive regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISS] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISS] [GO:0048048 "embryonic eye
            morphogenesis" evidence=ISS] [GO:0060014 "granulosa cell
            differentiation" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0006917 GO:GO:0003677 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0043280 GO:GO:0001541 GO:GO:0006309 GO:GO:0048048
            GO:GO:0002074 GO:GO:0060014 GO:GO:0008210 GO:GO:0019101
            HOVERGEN:HBG051651 GO:GO:0043028 GO:GO:0042703 EMBL:AY112725
            ProteinModelPortal:Q8MIP2 SMR:Q8MIP2 Uniprot:Q8MIP2
        Length = 377

 Score = 300 (110.7 bits), Expect = 1.2e-26, P = 1.2e-26
 Identities = 63/133 (47%), Positives = 84/133 (63%)

Query:    90 TGRAELAENSPSPGALQRVAR--ADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLS 147
             TGRA     +P+P +  +     A     +     KPPYSY++LI MAI+ S  K LTLS
Sbjct:    20 TGRAAKEPEAPAPPSPGKGGGGGAGAAPEKPDPAQKPPYSYVALIAMAIRESAEKRLTLS 79

Query:   148 EIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMF 207
              IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+KVPR      KG++WTL     +MF
Sbjct:    80 GIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMF 139

Query:   208 ENGCYLRRQKRFK 220
             E G Y RR++R K
Sbjct:   140 EKGNY-RRRRRMK 151


>RGD|1311770 [details] [associations]
            symbol:Foxj3 "forkhead box J3" species:10116 "Rattus norvegicus"
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0007389 "pattern
            specification process" evidence=IBA] [GO:0008134 "transcription
            factor binding" evidence=IBA] [GO:0008301 "DNA binding, bending"
            evidence=IBA] [GO:0009790 "embryo development" evidence=IBA]
            [GO:0009888 "tissue development" evidence=IBA] [GO:0019904 "protein
            domain specific binding" evidence=IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IBA]
            [GO:0048513 "organ development" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 RGD:1311770 GO:GO:0019904
            GO:GO:0045893 GO:GO:0043565 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0009790
            GO:GO:0003690 GO:GO:0008134 GO:GO:0007389 GO:GO:0051090
            GO:GO:0048513 GO:GO:0009888 IPI:IPI00359077
            Ensembl:ENSRNOT00000041401 UCSC:RGD:1311770 ArrayExpress:F1M9U9
            Uniprot:F1M9U9
        Length = 587

 Score = 285 (105.4 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
 Identities = 57/107 (53%), Positives = 74/107 (69%)

Query:   112 DKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 171
             D+   + +   KPPYSY SLIT AI +SP K +TLSEIYQ+I D FP+YR+    W+NSI
Sbjct:    66 DQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSI 125

Query:   172 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             RH+LS N CF+KVPR+ D PGKGS+W +  D+ N  E+    R +KR
Sbjct:   126 RHNLSLNKCFLKVPRSKDDPGKGSYWAI--DT-NPKEDTLPTRPKKR 169

 Score = 44 (20.5 bits), Expect = 1.4e-26, Sum P(2) = 1.4e-26
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query:   305 QNSYHQSFH-QQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFP 356
             Q   H + H QQ S+L    +    HP   P  H  HH   ++   A   P P
Sbjct:   359 QRPQHPASHPQQHSQLQPPHSQ---HPP--PHQHIQHHPNHQHQTLAHQPPPP 406


>UNIPROTKB|Q5J7N5 [details] [associations]
            symbol:FOXL2 "Transcription factor FOXL2" species:9031
            "Gallus gallus" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0001541 "ovarian follicle development"
            evidence=IBA] [GO:0002074 "extraocular skeletal muscle development"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=ISS;IBA] [GO:0006917 "induction of apoptosis"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0019101 "female somatic sex determination" evidence=IBA]
            [GO:0030331 "estrogen receptor binding" evidence=IBA] [GO:0031624
            "ubiquitin conjugating enzyme binding" evidence=IBA] [GO:0043028
            "cysteine-type endopeptidase regulator activity involved in
            apoptotic process" evidence=ISS;IBA] [GO:0043280 "positive
            regulation of cysteine-type endopeptidase activity involved in
            apoptotic process" evidence=ISS;IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0048048 "embryonic eye morphogenesis"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0042703
            "menstruation" evidence=IEA] [GO:0045892 "negative regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0060014 "granulosa
            cell differentiation" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0043065 "positive
            regulation of apoptotic process" evidence=ISS] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0045892
            GO:GO:0006917 GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0003690 GO:GO:0043280 GO:GO:0001541 GO:GO:0006309
            GO:GO:0008134 GO:GO:0048048 GO:GO:0007389 GO:GO:0030331
            GO:GO:0051090 GO:GO:0002074 GO:GO:0060014 eggNOG:COG5025
            GO:GO:0019101 GeneTree:ENSGT00700000104135 KO:K09405 CTD:668
            HOGENOM:HOG000218632 HOVERGEN:HBG051651 OMA:QPAELSM GO:GO:0043028
            GO:GO:0031624 OrthoDB:EOG4TF0KX EMBL:AADN02024206 EMBL:AY487165
            IPI:IPI00589814 RefSeq:NP_001012630.1 UniGene:Gga.7539 SMR:Q5J7N5
            STRING:Q5J7N5 Ensembl:ENSGALT00000033768 GeneID:503512
            KEGG:gga:503512 InParanoid:Q5J7N5 NextBio:20866179 Uniprot:Q5J7N5
        Length = 305

 Score = 299 (110.3 bits), Expect = 1.5e-26, P = 1.5e-26
 Identities = 58/110 (52%), Positives = 76/110 (69%)

Query:   111 ADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNS 170
             A+K   +     KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNS
Sbjct:    35 AEKGPEKPDPSQKPPYSYVALIAMAIRESAEKRLTLSGIYQYIISKFPFYEKNKKGWQNS 94

Query:   171 IRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             IRH+LS N+CF+KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:    95 IRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 143


>UNIPROTKB|F1M3L2 [details] [associations]
            symbol:Foxj3 "Protein Foxj3" species:10116 "Rattus
            norvegicus" [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 RGD:1311770 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104094 IPI:IPI00568727
            Ensembl:ENSRNOT00000011683 ArrayExpress:F1M3L2 Uniprot:F1M3L2
        Length = 621

 Score = 285 (105.4 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 57/107 (53%), Positives = 74/107 (69%)

Query:   112 DKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 171
             D+   + +   KPPYSY SLIT AI +SP K +TLSEIYQ+I D FP+YR+    W+NSI
Sbjct:    66 DQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSI 125

Query:   172 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             RH+LS N CF+KVPR+ D PGKGS+W +  D+ N  E+    R +KR
Sbjct:   126 RHNLSLNKCFLKVPRSKDDPGKGSYWAI--DT-NPKEDTLPTRPKKR 169

 Score = 44 (20.5 bits), Expect = 1.9e-26, Sum P(2) = 1.9e-26
 Identities = 16/53 (30%), Positives = 21/53 (39%)

Query:   305 QNSYHQSFH-QQDSELAAMVASGRCHPHLIPPDHYNHHLKQEYGASAVNHPFP 356
             Q   H + H QQ S+L    +    HP   P  H  HH   ++   A   P P
Sbjct:   393 QRPQHPASHPQQHSQLQPPHSQ---HPP--PHQHIQHHPNHQHQTLAHQPPPP 440


>UNIPROTKB|Q7T269 [details] [associations]
            symbol:FoxL2 "Forkhead transcription factor L2"
            species:9031 "Gallus gallus" [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0002074 "extraocular skeletal muscle development"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IEA] [GO:0006917 "induction of apoptosis" evidence=IEA]
            [GO:0019101 "female somatic sex determination" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0031624
            "ubiquitin conjugating enzyme binding" evidence=IEA] [GO:0042703
            "menstruation" evidence=IEA] [GO:0043028 "cysteine-type
            endopeptidase regulator activity involved in apoptotic process"
            evidence=IEA] [GO:0043280 "positive regulation of cysteine-type
            endopeptidase activity involved in apoptotic process" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IEA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IEA] [GO:0060014 "granulosa
            cell differentiation" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0043280 GO:GO:0006309 GO:GO:0060014 HSSP:Q99958
            GeneTree:ENSGT00700000104135 GO:GO:0043028 EMBL:AADN02024206
            UniGene:Gga.7539 EMBL:AY155534 IPI:IPI00821727 STRING:Q7T269
            Ensembl:ENSGALT00000040961 HOGENOM:HOG000198402 HOVERGEN:HBG098671
            InParanoid:Q7T269 Uniprot:Q7T269
        Length = 110

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:     1 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIISKFPFYEKNKKGWQNSIRHNLSLNECFI 60

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:    61 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 97


>ZFIN|ZDB-GENE-060512-241 [details] [associations]
            symbol:foxl2 "forkhead box L2" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008134 "transcription factor
            binding" evidence=IBA] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IBA] [GO:0007389 "pattern specification process"
            evidence=IBA] [GO:0043028 "cysteine-type endopeptidase regulator
            activity involved in apoptotic process" evidence=IBA] [GO:0031624
            "ubiquitin conjugating enzyme binding" evidence=IBA] [GO:0002074
            "extraocular skeletal muscle development" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0001541 "ovarian
            follicle development" evidence=IBA] [GO:0019101 "female somatic sex
            determination" evidence=IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0045944 "positive regulation of transcription
            from RNA polymerase II promoter" evidence=IBA] [GO:0048048
            "embryonic eye morphogenesis" evidence=IBA] [GO:0030331 "estrogen
            receptor binding" evidence=IBA] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0006917 "induction of apoptosis" evidence=IBA] [GO:0003677 "DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-060512-241 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0043280 GO:GO:0001541
            GO:GO:0006309 GO:GO:0008134 GO:GO:0048048 GO:GO:0007389
            GO:GO:0030331 GO:GO:0051090 GO:GO:0002074 eggNOG:COG5025
            GO:GO:0019101 GeneTree:ENSGT00700000104135 KO:K09405 CTD:668
            HOGENOM:HOG000218632 HOVERGEN:HBG051651 OMA:QPAELSM GO:GO:0043028
            GO:GO:0031624 EMBL:CU571391 EMBL:BC116585 IPI:IPI00508402
            RefSeq:NP_001038717.1 UniGene:Dr.90409 SMR:Q1JPV2 STRING:Q1JPV2
            Ensembl:ENSDART00000061828 GeneID:692279 KEGG:dre:692279
            InParanoid:Q1JPV2 OrthoDB:EOG4TF0KX NextBio:20902483 Uniprot:Q1JPV2
        Length = 306

 Score = 298 (110.0 bits), Expect = 1.9e-26, P = 1.9e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    46 KPPYSYVALIAMAIRESSEKRLTLSGIYQYIISKFPFYEKNKKGWQNSIRHNLSLNECFI 105

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   106 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 142


>UNIPROTKB|E2R718 [details] [associations]
            symbol:FOXL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            Ensembl:ENSCAFT00000012132 Uniprot:E2R718
        Length = 241

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 62/121 (51%), Positives = 79/121 (65%)

Query:   100 PSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPF 159
             PSPG     A  +K         KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPF
Sbjct:    35 PSPGGGGAGAAPEKPDPAQ----KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPF 90

Query:   160 YRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRF 219
             Y +N++ WQNSIRH+LS N+CF+KVPR      KG++WTL     +MFE G Y RR++R 
Sbjct:    91 YEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRM 149

Query:   220 K 220
             K
Sbjct:   150 K 150


>RGD|1310041 [details] [associations]
            symbol:Foxl2 "forkhead box L2" species:10116 "Rattus norvegicus"
            [GO:0001541 "ovarian follicle development" evidence=ISO;IBA]
            [GO:0002074 "extraocular skeletal muscle development"
            evidence=ISO;IBA] [GO:0003674 "molecular_function" evidence=ND]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISO] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
            factor complex" evidence=IBA] [GO:0006309 "apoptotic DNA
            fragmentation" evidence=ISO;IBA] [GO:0006917 "induction of
            apoptosis" evidence=ISO;IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008301 "DNA binding, bending" evidence=IBA] [GO:0019101
            "female somatic sex determination" evidence=ISO;IBA] [GO:0030331
            "estrogen receptor binding" evidence=ISO;IBA] [GO:0031624
            "ubiquitin conjugating enzyme binding" evidence=ISO;IBA]
            [GO:0042703 "menstruation" evidence=ISO;IBA] [GO:0043028
            "cysteine-type endopeptidase regulator activity involved in
            apoptotic process" evidence=ISO;IBA] [GO:0043065 "positive
            regulation of apoptotic process" evidence=ISO] [GO:0043280
            "positive regulation of cysteine-type endopeptidase activity
            involved in apoptotic process" evidence=ISO;IBA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA;ISO]
            [GO:0045944 "positive regulation of transcription from RNA
            polymerase II promoter" evidence=ISO;IBA] [GO:0048048 "embryonic
            eye morphogenesis" evidence=ISO;IBA] [GO:0051090 "regulation of
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0060014 "granulosa cell differentiation"
            evidence=IEA;ISO] [GO:0060026 "convergent extension" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            RGD:1310041 GO:GO:0045892 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0043280 GO:GO:0001541
            GO:GO:0006309 GO:GO:0008134 GO:GO:0048048 GO:GO:0007389
            GO:GO:0060026 GO:GO:0030331 GO:GO:0051090 GO:GO:0002074
            GO:GO:0060014 GO:GO:0019101 GeneTree:ENSGT00700000104135 KO:K09405
            CTD:668 OMA:QPAELSM GO:GO:0043028 GO:GO:0031624 GO:GO:0042703
            OrthoDB:EOG4B5P7G IPI:IPI00212053 RefSeq:XP_003750619.1
            RefSeq:XP_003754496.1 Ensembl:ENSRNOT00000023091 GeneID:367152
            KEGG:rno:367152 UCSC:RGD:1310041 NextBio:690759 Uniprot:D4A0S1
        Length = 374

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 65/133 (48%), Positives = 84/133 (63%)

Query:    90 TGRA--ELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLS 147
             +GRA  E   + PSPG     A       +     KPPYSY++LI MAI+ S  K LTLS
Sbjct:    20 SGRAVKEAEASPPSPGKGGGTAP-----EKPDPAQKPPYSYVALIAMAIRESAEKRLTLS 74

Query:   148 EIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMF 207
              IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+KVPR      KG++WTL     +MF
Sbjct:    75 GIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFIKVPREGGGERKGNYWTLDPACEDMF 134

Query:   208 ENGCYLRRQKRFK 220
             E G Y RR++R K
Sbjct:   135 EKGNY-RRRRRMK 146


>ZFIN|ZDB-GENE-990415-267 [details] [associations]
            symbol:foxg1a "forkhead box G1a" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0007346
            "regulation of mitotic cell cycle" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0009953 "dorsal/ventral pattern formation"
            evidence=IBA] [GO:0035058 "nonmotile primary cilium assembly"
            evidence=IBA] [GO:0016199 "axon midline choice point recognition"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0003690
            "double-stranded DNA binding" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045665 "negative
            regulation of neuron differentiation" evidence=IBA] [GO:0008301
            "DNA binding, bending" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IBA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0060059
            "embryonic retina morphogenesis in camera-type eye" evidence=IMP]
            [GO:0030182 "neuron differentiation" evidence=IMP] [GO:0043584
            "nose development" evidence=IMP] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-990415-267 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705 GO:GO:0008301
            GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
            GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052
            GO:GO:0051090 GO:GO:0035058 GO:GO:0060059 GO:GO:0043584
            GO:GO:0009888 HOVERGEN:HBG051645 OMA:YSTMLTQ
            GeneTree:ENSGT00700000104051 EMBL:BX511189 EMBL:BC092710
            IPI:IPI00492072 UniGene:Dr.75832 SMR:Q568V0
            Ensembl:ENSDART00000104204 InParanoid:Q568V0 Uniprot:Q568V0
        Length = 420

 Score = 297 (109.6 bits), Expect = 2.5e-26, P = 2.5e-26
 Identities = 65/142 (45%), Positives = 85/142 (59%)

Query:    77 CMGGINSYNTALTTGRAELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAI 136
             C    NS + +  T   E  E        +     DK   ++  + KPP+SY +LI MAI
Sbjct:    70 CAKSDNSSHDSSCTDEKEKQEEKRDAKEGEGGKEGDK---KNGKYEKPPFSYNALIMMAI 126

Query:   137 QNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKPGKGSF 196
             + SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+LS N CFVKVPR  D PGKG++
Sbjct:   127 RQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNLSLNKCFVKVPRHYDDPGKGNY 186

Query:   197 WTLHKDSGNMFENGCY--LRRQ 216
             W L   S ++F  G    LRR+
Sbjct:   187 WMLDPSSDDVFIGGTTGKLRRR 208


>UNIPROTKB|E1BK17 [details] [associations]
            symbol:FOXJ3 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
            DNA binding" evidence=IEA] [GO:0003700 "sequence-specific DNA
            binding transcription factor activity" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 GO:GO:0043565 GO:GO:0003700 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0006351 GeneTree:ENSGT00700000104094
            OMA:MSQQHMM EMBL:DAAA02009082 EMBL:DAAA02009083 IPI:IPI00924244
            Ensembl:ENSBTAT00000060940 Uniprot:E1BK17
        Length = 610

 Score = 287 (106.1 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 57/107 (53%), Positives = 74/107 (69%)

Query:   112 DKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSI 171
             D+   + +   KPPYSY SLIT AI +SP K +TLSEIYQ+I D FP+YR+    W+NSI
Sbjct:    52 DQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSGWKNSI 111

Query:   172 RHSLSFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKR 218
             RH+LS N CF+KVPR+ D PGKGS+W +  D+ N  E+    R +KR
Sbjct:   112 RHNLSLNKCFLKVPRSKDDPGKGSYWAI--DT-NPKEDALPTRPKKR 155

 Score = 40 (19.1 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
 Identities = 15/54 (27%), Positives = 18/54 (33%)

Query:   306 NSYHQSFHQQDSELAAMVASGRCHPHLIP---PDHYNHHLKQEYGASAVNHPFP 356
             NS+    +   S   A V+      H  P   P H  H L Q        HP P
Sbjct:   336 NSHGSGLNTTGSNSVAQVSLSHPQMHTQPSPHPSHRPHGLPQH--PQRPQHPAP 387


>UNIPROTKB|F1NP93 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            IPI:IPI00581171 OMA:YSTMLTQ GeneTree:ENSGT00700000104051
            EMBL:AADN02003339 Ensembl:ENSGALT00000016016 Uniprot:F1NP93
        Length = 406

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +++  + KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+L
Sbjct:    91 KKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNL 150

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   151 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 193


>UNIPROTKB|Q6VFT7 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:9913 "Bos
            taurus" [GO:0060014 "granulosa cell differentiation" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0001541 "ovarian follicle
            development" evidence=ISS;IBA] [GO:0048048 "embryonic eye
            morphogenesis" evidence=ISS;IBA] [GO:0045944 "positive regulation
            of transcription from RNA polymerase II promoter" evidence=ISS;IBA]
            [GO:0019101 "female somatic sex determination" evidence=ISS;IBA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0006917 "induction of apoptosis" evidence=ISS;IBA] [GO:0002074
            "extraocular skeletal muscle development" evidence=ISS;IBA]
            [GO:0043280 "positive regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISS;IBA]
            [GO:0043065 "positive regulation of apoptotic process"
            evidence=ISS] [GO:0043028 "cysteine-type endopeptidase regulator
            activity involved in apoptotic process" evidence=ISS;IBA]
            [GO:0042703 "menstruation" evidence=ISS;IBA] [GO:0006309 "apoptotic
            DNA fragmentation" evidence=ISS;IBA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0060026 "convergent extension" evidence=IBA] [GO:0051090
            "regulation of sequence-specific DNA binding transcription factor
            activity" evidence=IBA] [GO:0031624 "ubiquitin conjugating enzyme
            binding" evidence=IBA] [GO:0030331 "estrogen receptor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0008134 "transcription factor binding" evidence=IBA]
            [GO:0007389 "pattern specification process" evidence=IBA]
            [GO:0005667 "transcription factor complex" evidence=IBA]
            [GO:0003705 "RNA polymerase II distal enhancer sequence-specific
            DNA binding transcription factor activity" evidence=IBA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0045892 GO:GO:0006917 GO:GO:0043565 GO:GO:0045944
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0008301 GO:GO:0003690 GO:GO:0043280 GO:GO:0001541
            GO:GO:0006309 GO:GO:0008134 GO:GO:0048048 GO:GO:0007389
            GO:GO:0060026 GO:GO:0030331 GO:GO:0051090 GO:GO:0002074
            GO:GO:0060014 eggNOG:COG5025 GO:GO:0019101
            GeneTree:ENSGT00700000104135 KO:K09405 EMBL:AY340970 EMBL:AY116404
            IPI:IPI00718456 RefSeq:NP_001026920.1 UniGene:Bt.13033
            ProteinModelPortal:Q6VFT7 SMR:Q6VFT7 Ensembl:ENSBTAT00000044307
            GeneID:281770 KEGG:bta:281770 CTD:668 HOGENOM:HOG000218632
            HOVERGEN:HBG051651 InParanoid:Q6VFT7 OMA:QPAELSM NextBio:20805686
            GO:GO:0043028 GO:GO:0031624 GO:GO:0042703 Uniprot:Q6VFT7
        Length = 377

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    55 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 114

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   115 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 151


>UNIPROTKB|F6Y816 [details] [associations]
            symbol:FOXL2 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104135 Ensembl:ENSCAFT00000012132
            EMBL:AAEX03013625 OMA:RVTACRR Uniprot:F6Y816
        Length = 254

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    57 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 116

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   117 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 153


>UNIPROTKB|P58012 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:9606 "Homo
            sapiens" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0060014 "granulosa cell differentiation" evidence=IEA]
            [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
            "RNA polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005667
            "transcription factor complex" evidence=IBA] [GO:0006917 "induction
            of apoptosis" evidence=IBA] [GO:0007389 "pattern specification
            process" evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0019101 "female somatic sex determination" evidence=IBA]
            [GO:0030331 "estrogen receptor binding" evidence=IBA] [GO:0045944
            "positive regulation of transcription from RNA polymerase II
            promoter" evidence=IBA] [GO:0048048 "embryonic eye morphogenesis"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:0060026
            "convergent extension" evidence=IBA] [GO:0003700 "sequence-specific
            DNA binding transcription factor activity" evidence=ISS;NAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
            binding" evidence=IDA;TAS] [GO:0042703 "menstruation" evidence=IMP]
            [GO:0030154 "cell differentiation" evidence=NAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0001541 "ovarian follicle development"
            evidence=ISS;IMP] [GO:0006309 "apoptotic DNA fragmentation"
            evidence=IMP] [GO:0043028 "cysteine-type endopeptidase regulator
            activity involved in apoptotic process" evidence=IMP] [GO:0043065
            "positive regulation of apoptotic process" evidence=IMP]
            [GO:0043280 "positive regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=IMP] [GO:0002074
            "extraocular skeletal muscle development" evidence=IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IPI]
            [GO:0045892 "negative regulation of transcription, DNA-dependent"
            evidence=IDA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0045892 GO:GO:0030154 GO:GO:0006917
            GO:GO:0043565 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0003690
            GO:GO:0043280 GO:GO:0001541 GO:GO:0006309 GO:GO:0008134
            GO:GO:0048048 GO:GO:0007389 GO:GO:0060026 GO:GO:0030331
            GO:GO:0051090 Orphanet:619 GO:GO:0002074 GO:GO:0060014
            eggNOG:COG5025 GO:GO:0019101 KO:K09405 CTD:668 HOVERGEN:HBG051651
            OMA:QPAELSM GO:GO:0043028 GO:GO:0042703 EMBL:AF301906 EMBL:DQ016609
            EMBL:BC062549 IPI:IPI00010550 RefSeq:NP_075555.1 UniGene:Hs.289292
            ProteinModelPortal:P58012 SMR:P58012 IntAct:P58012 STRING:P58012
            PhosphoSite:P58012 DMDM:13626838 PaxDb:P58012 PRIDE:P58012
            Ensembl:ENST00000330315 GeneID:668 KEGG:hsa:668 UCSC:uc003esw.3
            GeneCards:GC03M138663 HGNC:HGNC:1092 MIM:110100 MIM:605597
            MIM:608996 neXtProt:NX_P58012 Orphanet:126 Orphanet:261559
            PharmGKB:PA28235 InParanoid:P58012 GenomeRNAi:668 NextBio:2732
            ArrayExpress:P58012 Bgee:P58012 CleanEx:HS_FOXL2
            Genevestigator:P58012 GermOnline:ENSG00000183770 Uniprot:P58012
        Length = 376

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    54 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 113

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   114 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 150


>UNIPROTKB|Q6VFT6 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:9823 "Sus
            scrofa" [GO:0019101 "female somatic sex determination"
            evidence=ISS] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=ISS] [GO:0060014 "granulosa
            cell differentiation" evidence=ISS] [GO:0048048 "embryonic eye
            morphogenesis" evidence=ISS] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=ISS]
            [GO:0006917 "induction of apoptosis" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
            [GO:0001541 "ovarian follicle development" evidence=ISS]
            [GO:0002074 "extraocular skeletal muscle development" evidence=ISS]
            [GO:0043280 "positive regulation of cysteine-type endopeptidase
            activity involved in apoptotic process" evidence=ISS] [GO:0043065
            "positive regulation of apoptotic process" evidence=ISS]
            [GO:0043028 "cysteine-type endopeptidase regulator activity
            involved in apoptotic process" evidence=ISS] [GO:0042703
            "menstruation" evidence=ISS] [GO:0006309 "apoptotic DNA
            fragmentation" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0045892 "negative
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0031624 "ubiquitin conjugating enzyme binding" evidence=IEA]
            [GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339 GO:GO:0005634
            GO:GO:0045892 GO:GO:0006917 GO:GO:0003677 GO:GO:0043565
            GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006351 GO:GO:0043280 GO:GO:0001541 GO:GO:0006309
            GO:GO:0048048 GO:GO:0002074 GO:GO:0060014 GO:GO:0019101
            GeneTree:ENSGT00700000104135 KO:K09405 CTD:668 HOVERGEN:HBG051651
            OMA:QPAELSM GO:GO:0043028 GO:GO:0042703 EMBL:AY340971
            RefSeq:NP_001231594.1 RefSeq:XP_003483301.1 UniGene:Ssc.57156
            ProteinModelPortal:Q6VFT6 SMR:Q6VFT6 Ensembl:ENSSSCT00000030361
            GeneID:100622956 KEGG:ssc:100622956 Uniprot:Q6VFT6
        Length = 377

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    55 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 114

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   115 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 151


>UNIPROTKB|Q4VUF1 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:39086
            "Ellobius lutescens" [GO:0001541 "ovarian follicle development"
            evidence=ISS] [GO:0002074 "extraocular skeletal muscle development"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006309
            "apoptotic DNA fragmentation" evidence=ISS] [GO:0042703
            "menstruation" evidence=ISS] [GO:0043028 "cysteine-type
            endopeptidase regulator activity involved in apoptotic process"
            evidence=ISS] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISS] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0045893
            GO:GO:0030154 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0043065
            GO:GO:0043280 GO:GO:0001541 GO:GO:0006309 GO:GO:0002074 HSSP:Q99958
            HOVERGEN:HBG051651 GO:GO:0043028 GO:GO:0042703 EMBL:AY623815
            ProteinModelPortal:Q4VUF1 SMR:Q4VUF1 Uniprot:Q4VUF1
        Length = 373

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    50 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 109

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   110 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 146


>UNIPROTKB|Q6VFT5 [details] [associations]
            symbol:FOXL2 "Forkhead box protein L2" species:9986
            "Oryctolagus cuniculus" [GO:0001541 "ovarian follicle development"
            evidence=ISS] [GO:0002074 "extraocular skeletal muscle development"
            evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
            "sequence-specific DNA binding transcription factor activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006309
            "apoptotic DNA fragmentation" evidence=ISS] [GO:0042703
            "menstruation" evidence=ISS] [GO:0043028 "cysteine-type
            endopeptidase regulator activity involved in apoptotic process"
            evidence=ISS] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISS] [GO:0043280 "positive regulation of
            cysteine-type endopeptidase activity involved in apoptotic process"
            evidence=ISS] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISS] InterPro:IPR001766 InterPro:IPR018122
            Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
            PROSITE:PS50039 SMART:SM00339 GO:GO:0005634 GO:GO:0045893
            GO:GO:0030154 GO:GO:0003677 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0043065
            GO:GO:0043280 GO:GO:0001541 GO:GO:0006309 GO:GO:0002074 CTD:668
            HOVERGEN:HBG051651 GO:GO:0043028 GO:GO:0042703 EMBL:AY340972
            RefSeq:NP_001164586.1 UniGene:Ocu.7555 ProteinModelPortal:Q6VFT5
            SMR:Q6VFT5 GeneID:100328926 Uniprot:Q6VFT5
        Length = 384

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 56/98 (57%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTLS IYQ+I+  FPFY +N++ WQNSIRH+LS N+CF+
Sbjct:    56 KPPYSYVALIAMAIRESAEKRLTLSGIYQYIIAKFPFYEKNKKGWQNSIRHNLSLNECFI 115

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             KVPR      KG++WTL     +MFE G Y RR++R K
Sbjct:   116 KVPREGGGERKGNYWTLDPACEDMFEKGNY-RRRRRMK 152


>UNIPROTKB|Q9YHC5 [details] [associations]
            symbol:foxg1 "Forkhead box protein G1" species:8355
            "Xenopus laevis" [GO:0003677 "DNA binding" evidence=NAS]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=NAS] [GO:0005634 "nucleus" evidence=NAS]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=NAS] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IMP] [GO:0008285 "negative regulation of
            cell proliferation" evidence=IMP] [GO:0042659 "regulation of cell
            fate specification" evidence=IMP] [GO:0045892 "negative regulation
            of transcription, DNA-dependent" evidence=IDA;IMP] [GO:0045893
            "positive regulation of transcription, DNA-dependent"
            evidence=IDA;IMP] [GO:0050768 "negative regulation of neurogenesis"
            evidence=IMP] [GO:0050769 "positive regulation of neurogenesis"
            evidence=IMP] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 GO:GO:0005634 GO:GO:0045892 GO:GO:0045893
            GO:GO:0008285 GO:GO:0003677 GO:GO:0008284 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0050769 GO:GO:0050768 GO:GO:0042659 HSSP:Q99958 CTD:2290
            HOVERGEN:HBG051645 KO:K09385 EMBL:AF101387 RefSeq:NP_001079165.1
            UniGene:Xl.416 ProteinModelPortal:Q9YHC5 SMR:Q9YHC5 GeneID:373732
            KEGG:xla:373732 Xenbase:XB-GENE-865339 Uniprot:Q9YHC5
        Length = 436

 Score = 296 (109.3 bits), Expect = 3.2e-26, P = 3.2e-26
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +++  + KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+L
Sbjct:   121 KKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNL 180

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   181 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 223


>ZFIN|ZDB-GENE-040426-2090 [details] [associations]
            symbol:foxq1b "forkhead box Q1b" species:7955
            "Danio rerio" [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0006355
            "regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250
            PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039
            SMART:SM00339 ZFIN:ZDB-GENE-040426-2090 GO:GO:0005634 GO:GO:0043565
            GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            eggNOG:COG5025 GeneTree:ENSGT00690000101636 HOGENOM:HOG000112634
            HOVERGEN:HBG051658 OrthoDB:EOG4TQMB6 EMBL:BX510653 IPI:IPI00758545
            UniGene:Dr.25810 SMR:Q1LWZ9 Ensembl:ENSDART00000139852 OMA:CNTADIS
            Uniprot:Q1LWZ9
        Length = 304

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 61/126 (48%), Positives = 84/126 (66%)

Query:    94 ELAENSPSPGALQRVARADKTYRRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFI 153
             + + NSP PGA     +A K Y R     KPPYSYI+LI MAI++S T  LTL+EI +++
Sbjct:    41 DCSANSPGPGAPVPDGKA-KPYTR---RPKPPYSYIALIAMAIRDSNTGRLTLAEINEYL 96

Query:   154 MDLFPFYRQNQQRWQNSIRHSLSFNDCFVKVPRTPDKP-GKGSFWTLHKDSGNMFENGCY 212
             M  FPF+R +   W+NS+RH+LS NDCF+KV R P +P GK ++W L+  S   F +G +
Sbjct:    97 MKKFPFFRGSYTGWRNSVRHNLSLNDCFLKVLRDPSRPWGKDNYWMLNPHSEYTFADGVF 156

Query:   213 LRRQKR 218
              RR+KR
Sbjct:   157 RRRRKR 162


>ZFIN|ZDB-GENE-081022-71 [details] [associations]
            symbol:zgc:194189 "zgc:194189" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-081022-71 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 eggNOG:COG5025
            GeneTree:ENSGT00700000104135 OrthoDB:EOG4MCX19 HOGENOM:HOG000218632
            HOVERGEN:HBG051651 EMBL:CT573456 EMBL:BC162838 IPI:IPI00502363
            RefSeq:NP_001122282.1 UniGene:Dr.148363 Ensembl:ENSDART00000020616
            GeneID:100004081 KEGG:dre:100004081 OMA:RRVKRPY NextBio:20786110
            Uniprot:B3DHP4
        Length = 260

 Score = 295 (108.9 bits), Expect = 4.0e-26, P = 4.0e-26
 Identities = 54/98 (55%), Positives = 72/98 (73%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPPYSY++LI MAI+ S  K LTL++IY +I+  FP+Y +N++ WQNSIRH+LS N+CFV
Sbjct:    35 KPPYSYVALIAMAIRESEDKKLTLNDIYSYIISKFPYYEKNKKGWQNSIRHNLSLNECFV 94

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCYLRRQKRFK 220
             K+PR      KG+FWTL     +MFE G Y RR++R K
Sbjct:    95 KIPRESGGERKGNFWTLDPAFNDMFEKGNY-RRRRRVK 131


>UNIPROTKB|Q90964 [details] [associations]
            symbol:FOXG1 "Forkhead box protein G1" species:9031 "Gallus
            gallus" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0002052 "positive regulation of neuroblast proliferation"
            evidence=IBA] [GO:0003690 "double-stranded DNA binding"
            evidence=IBA] [GO:0003705 "RNA polymerase II distal enhancer
            sequence-specific DNA binding transcription factor activity"
            evidence=IBA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0007346 "regulation of mitotic cell cycle"
            evidence=IBA] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IBA]
            [GO:0016199 "axon midline choice point recognition" evidence=IBA]
            [GO:0021954 "central nervous system neuron development"
            evidence=IBA] [GO:0030902 "hindbrain development" evidence=IBA]
            [GO:0035058 "nonmotile primary cilium assembly" evidence=IBA]
            [GO:0042472 "inner ear morphogenesis" evidence=IBA] [GO:0043584
            "nose development" evidence=IBA] [GO:0045665 "negative regulation
            of neuron differentiation" evidence=IBA] [GO:0045787 "positive
            regulation of cell cycle" evidence=IBA] [GO:0045944 "positive
            regulation of transcription from RNA polymerase II promoter"
            evidence=IBA] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0009792 GO:GO:0007346 GO:GO:0043565 GO:GO:0045944
            GO:GO:0016199 GO:GO:0045665 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0005667 GO:GO:0003705 GO:GO:0008301 GO:GO:0042472
            GO:GO:0003690 GO:GO:0030902 GO:GO:0009953 GO:GO:0008134
            GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
            GO:GO:0035058 GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888
            EMBL:L36814 EMBL:U47275 IPI:IPI00581171 PIR:A55909
            RefSeq:NP_990524.1 UniGene:Gga.657 ProteinModelPortal:Q90964
            SMR:Q90964 STRING:Q90964 GeneID:396110 KEGG:gga:396110 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 InParanoid:Q90964 KO:K09385
            OrthoDB:EOG4M0F2T NextBio:20816168 Uniprot:Q90964
        Length = 451

 Score = 296 (109.3 bits), Expect = 4.7e-26, P = 4.7e-26
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +++  + KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+L
Sbjct:   136 KKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNL 195

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   196 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 238


>UNIPROTKB|C9JVP0 [details] [associations]
            symbol:FOXJ3 "Forkhead box protein J3" species:9606 "Homo
            sapiens" [GO:0003700 "sequence-specific DNA binding transcription
            factor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            GO:GO:0005634 EMBL:CH471059 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            HOGENOM:HOG000231184 EMBL:AC096540 EMBL:AC114492 IPI:IPI00414683
            UniGene:Hs.26023 HGNC:HGNC:29178 ChiTaRS:FOXJ3 SMR:C9JVP0
            STRING:C9JVP0 Ensembl:ENST00000445886 Uniprot:C9JVP0
        Length = 382

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 61/153 (39%), Positives = 88/153 (57%)

Query:    55 GMNGPNCMSTGSMGYSSNMNAAC--MGGINSYNTALTTGRAELAENSPSPGALQRVARAD 112
             G+ G  C S  S+  +S + ++   M  +          +++  +N+   G  ++ A  D
Sbjct:     2 GLYGQACPSVTSLRMTSELESSLTSMDWLPQLTMRAAIQKSDATQNAHGTGISKKNALLD 61

Query:   113 KTYR------RSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQR 166
                       + +   KPPYSY SLIT AI +SP K +TLSEIYQ+I D FP+YR+    
Sbjct:    62 PNTTLDQEEVQQHKDGKPPYSYASLITFAINSSPKKKMTLSEIYQWICDNFPYYREAGSG 121

Query:   167 WQNSIRHSLSFNDCFVKVPRTPDKPGKGSFWTL 199
             W+NSIRH+LS N CF+KVPR+ D PGKGS+W +
Sbjct:   122 WKNSIRHNLSLNKCFLKVPRSKDDPGKGSYWAI 154


>ZFIN|ZDB-GENE-080305-12 [details] [associations]
            symbol:zgc:175247 "zgc:175247" species:7955 "Danio
            rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
            [GO:0003700 "sequence-specific DNA binding transcription factor
            activity" evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001766
            InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657
            PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            ZFIN:ZDB-GENE-080305-12 GO:GO:0005634 GO:GO:0043565 GO:GO:0003700
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GeneTree:ENSGT00700000104051 EMBL:CABZ01084703 IPI:IPI00889384
            Ensembl:ENSDART00000102505 Bgee:F1RES1 Uniprot:F1RES1
        Length = 316

 Score = 293 (108.2 bits), Expect = 6.6e-26, P = 6.6e-26
 Identities = 59/108 (54%), Positives = 74/108 (68%)

Query:   123 KPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSLSFNDCFV 182
             KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FPFYR+++Q WQNSIRH+LS N CFV
Sbjct:    62 KPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPFYREHKQGWQNSIRHNLSLNKCFV 121

Query:   183 KVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQKRFKDDKKEVIR 228
             KVPR  D PGKG++W L   S ++F  G    LRR+      K  + R
Sbjct:   122 KVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRRSATSRGKLAIKR 169


>RGD|2619 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10116 "Rattus norvegicus"
          [GO:0002052 "positive regulation of neuroblast proliferation"
          evidence=ISO;IBA] [GO:0003674 "molecular_function" evidence=ND]
          [GO:0003690 "double-stranded DNA binding" evidence=IBA] [GO:0003705
          "RNA polymerase II distal enhancer sequence-specific DNA binding
          transcription factor activity" evidence=IBA] [GO:0005575
          "cellular_component" evidence=ND] [GO:0005634 "nucleus" evidence=ISO]
          [GO:0005667 "transcription factor complex" evidence=IBA] [GO:0007346
          "regulation of mitotic cell cycle" evidence=ISO;IBA] [GO:0007420
          "brain development" evidence=IEP] [GO:0007568 "aging" evidence=IEP]
          [GO:0008134 "transcription factor binding" evidence=IBA] [GO:0008301
          "DNA binding, bending" evidence=IBA] [GO:0009792 "embryo development
          ending in birth or egg hatching" evidence=IBA] [GO:0009888 "tissue
          development" evidence=IBA] [GO:0009953 "dorsal/ventral pattern
          formation" evidence=ISO;IBA] [GO:0016199 "axon midline choice point
          recognition" evidence=ISO;IBA] [GO:0021954 "central nervous system
          neuron development" evidence=ISO;IBA] [GO:0022008 "neurogenesis"
          evidence=ISO] [GO:0030900 "forebrain development" evidence=IEA;ISO]
          [GO:0030902 "hindbrain development" evidence=IBA] [GO:0035058
          "nonmotile primary cilium assembly" evidence=IBA] [GO:0042472 "inner
          ear morphogenesis" evidence=ISO;IBA] [GO:0043565 "sequence-specific
          DNA binding" evidence=IEA] [GO:0043584 "nose development"
          evidence=IBA] [GO:0045665 "negative regulation of neuron
          differentiation" evidence=ISO;IBA] [GO:0045787 "positive regulation
          of cell cycle" evidence=ISO;IBA] [GO:0045892 "negative regulation of
          transcription, DNA-dependent" evidence=IEA;ISO] [GO:0045944 "positive
          regulation of transcription from RNA polymerase II promoter"
          evidence=IBA] [GO:0048667 "cell morphogenesis involved in neuron
          differentiation" evidence=ISO] [GO:0051090 "regulation of
          sequence-specific DNA binding transcription factor activity"
          evidence=IBA] [GO:2000177 "regulation of neural precursor cell
          proliferation" evidence=ISO] InterPro:IPR001766 InterPro:IPR018122
          Pfam:PF00250 PRINTS:PR00053 PROSITE:PS00657 PROSITE:PS00658
          PROSITE:PS50039 SMART:SM00339 RGD:2619 GO:GO:0009792 GO:GO:0007346
          GO:GO:0007568 GO:GO:0043565 GO:GO:0045944 GO:GO:0016199 GO:GO:0045665
          Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
          GO:GO:0008301 GO:GO:0042472 GO:GO:0003690 GO:GO:0030902 GO:GO:0009953
          GO:GO:0008134 GO:GO:0021954 GO:GO:0045787 GO:GO:0002052 GO:GO:0051090
          GO:GO:0035058 GO:GO:0043584 GO:GO:0009888 CTD:2290 HOVERGEN:HBG051645
          KO:K09385 EMBL:M87634 IPI:IPI00204255 PIR:JH0672 RefSeq:NP_036692.1
          UniGene:Rn.9864 ProteinModelPortal:Q00939 SMR:Q00939 STRING:Q00939
          PhosphoSite:Q00939 PRIDE:Q00939 GeneID:24370 KEGG:rno:24370
          UCSC:RGD:2619 eggNOG:NOG242525 NextBio:603113 Genevestigator:Q00939
          Uniprot:Q00939
        Length = 480

 Score = 296 (109.3 bits), Expect = 7.4e-26, P = 7.4e-26
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +++  + KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+L
Sbjct:   165 KKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNL 224

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   225 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 267


>MGI|MGI:1347464 [details] [associations]
            symbol:Foxg1 "forkhead box G1" species:10090 "Mus musculus"
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IBA] [GO:0002052 "positive
            regulation of neuroblast proliferation" evidence=IMP] [GO:0003677
            "DNA binding" evidence=IEA] [GO:0003690 "double-stranded DNA
            binding" evidence=IBA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0003705 "RNA
            polymerase II distal enhancer sequence-specific DNA binding
            transcription factor activity" evidence=IBA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005667 "transcription factor complex"
            evidence=IBA] [GO:0006351 "transcription, DNA-dependent"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0007275 "multicellular organismal
            development" evidence=IEA] [GO:0007346 "regulation of mitotic cell
            cycle" evidence=IMP] [GO:0008134 "transcription factor binding"
            evidence=IBA] [GO:0008301 "DNA binding, bending" evidence=IBA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IBA] [GO:0009888 "tissue development" evidence=IBA]
            [GO:0009953 "dorsal/ventral pattern formation" evidence=IMP]
            [GO:0016199 "axon midline choice point recognition" evidence=IMP]
            [GO:0021954 "central nervous system neuron development"
            evidence=IMP] [GO:0022008 "neurogenesis" evidence=IDA] [GO:0030900
            "forebrain development" evidence=IMP] [GO:0030902 "hindbrain
            development" evidence=IBA] [GO:0035058 "nonmotile primary cilium
            assembly" evidence=IBA] [GO:0042472 "inner ear morphogenesis"
            evidence=IGI;IMP] [GO:0043565 "sequence-specific DNA binding"
            evidence=IEA] [GO:0043584 "nose development" evidence=IBA]
            [GO:0045665 "negative regulation of neuron differentiation"
            evidence=IMP] [GO:0045787 "positive regulation of cell cycle"
            evidence=IMP] [GO:0045892 "negative regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
            transcription from RNA polymerase II promoter" evidence=IBA]
            [GO:0048667 "cell morphogenesis involved in neuron differentiation"
            evidence=IMP] [GO:0051090 "regulation of sequence-specific DNA
            binding transcription factor activity" evidence=IBA] [GO:2000177
            "regulation of neural precursor cell proliferation" evidence=IGI]
            InterPro:IPR001766 InterPro:IPR018122 Pfam:PF00250 PRINTS:PR00053
            PROSITE:PS00657 PROSITE:PS00658 PROSITE:PS50039 SMART:SM00339
            MGI:MGI:1347464 GO:GO:0009792 GO:GO:0007346 GO:GO:0043565
            GO:GO:0045944 GO:GO:0016199 GO:GO:0030900 GO:GO:0045665
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0005667 GO:GO:0003705
            GO:GO:0000122 GO:GO:0008301 GO:GO:0042472 GO:GO:0003690
            GO:GO:0030902 GO:GO:0009953 GO:GO:0008134 GO:GO:0021954
            GO:GO:0045787 GO:GO:0002052 GO:GO:0051090 GO:GO:0035058
            GO:GO:0043584 eggNOG:COG5025 GO:GO:0009888 CTD:2290
            HOGENOM:HOG000112629 HOVERGEN:HBG051645 KO:K09385 OrthoDB:EOG4M0F2T
            OMA:YSTMLTQ EMBL:U36760 EMBL:BC046958 IPI:IPI00122768
            RefSeq:NP_001153584.1 RefSeq:NP_032267.1 UniGene:Mm.4704
            ProteinModelPortal:Q60987 SMR:Q60987 STRING:Q60987
            PhosphoSite:Q60987 PRIDE:Q60987 Ensembl:ENSMUST00000021333
            Ensembl:ENSMUST00000179669 GeneID:15228 KEGG:mmu:15228
            GeneTree:ENSGT00700000104051 InParanoid:Q60987 ChiTaRS:FOXG1
            NextBio:287819 Bgee:Q60987 CleanEx:MM_FOXG1 Genevestigator:Q60987
            GermOnline:ENSMUSG00000020950 Uniprot:Q60987
        Length = 481

 Score = 296 (109.3 bits), Expect = 7.5e-26, P = 7.5e-26
 Identities = 57/103 (55%), Positives = 75/103 (72%)

Query:   116 RRSYTHAKPPYSYISLITMAIQNSPTKMLTLSEIYQFIMDLFPFYRQNQQRWQNSIRHSL 175
             +++  + KPP+SY +LI MAI+ SP K LTL+ IY+FIM  FP+YR+N+Q WQNSIRH+L
Sbjct:   166 KKNGKYEKPPFSYNALIMMAIRQSPEKRLTLNGIYEFIMKNFPYYRENKQGWQNSIRHNL 225

Query:   176 SFNDCFVKVPRTPDKPGKGSFWTLHKDSGNMFENGCY--LRRQ 216
             S N CFVKVPR  D PGKG++W L   S ++F  G    LRR+
Sbjct:   226 SLNKCFVKVPRHYDDPGKGNYWMLDPSSDDVFIGGTTGKLRRR 268

WARNING:  HSPs involving 342 database sequences were not reported due to the
          limiting value of parameter B = 250.


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.129   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      417       347   0.00098  116 3  11 23  0.43    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  592
  No. of states in DFA:  615 (65 KB)
  Total size of DFA:  250 KB (2134 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  30.48u 0.08s 30.56t   Elapsed:  00:00:17
  Total cpu time:  30.52u 0.08s 30.60t   Elapsed:  00:00:17
  Start:  Thu Aug 15 12:28:36 2013   End:  Thu Aug 15 12:28:53 2013
WARNINGS ISSUED:  2
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with fkh fkh fkh fork head	protein from Drosophila melanogaster	5.2e-77
BLAST match view associations BLAST with FoxA FoxA FoxA Uncharacterized protein	protein from Strongylocentrotus purpuratus	2.0e-65
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Bos taurus	3.3e-65
BLAST match view associations BLAST with PANDA_013447 PANDA_013447 PANDA_013447 Putative uncharacterized protein	protein from Ailuropoda melanoleuca	6.8e-65
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Hepatocyte nuclear factor 3-beta	protein from Homo sapiens	4.8e-64
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Sus scrofa	4.8e-64
BLAST match view associations BLAST with foxa2 foxa2 foxa2 Forkhead box protein A2	protein from Xenopus (Silurana) tropicalis	1.3e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Sus scrofa	3.3e-63
BLAST match view associations BLAST with foxa2-a foxa2-a foxa2-a Forkhead box protein A2-A	protein from Xenopus laevis	3.3e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Canis lupus familiaris	4.2e-63
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Uncharacterized protein	protein from Bos taurus	4.2e-63
BLAST match view associations BLAST with foxa1 foxa1 foxa1 forkhead box A1	gene_product from Danio rerio	6.9e-63
BLAST match view associations BLAST with foxa2-b foxa2-b foxa2-b Forkhead box protein A2-B	protein from Xenopus laevis	1.1e-62
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Hepatocyte nuclear factor 3-alpha	protein from Homo sapiens	1.1e-62
BLAST match view associations BLAST with FOXA1 FOXA1 FOXA1 Hepatocyte nuclear factor 3-alpha	protein from Homo sapiens	1.1e-62
BLAST match view associations BLAST with foxa2 foxa2 foxa2 forkhead box A2	gene_product from Danio rerio	1.4e-62
BLAST match view associations BLAST with FOXA2 FOXA2 FOXA2 Uncharacterized protein	protein from Canis lupus familiaris	2.3e-62
BLAST match view associations BLAST with foxa1-a foxa1-a foxa1-a Forkhead box protein A1-A	protein from Xenopus laevis	3.7e-62
BLAST match view associations BLAST with Foxa1 Foxa1 Foxa1 forkhead box A1	protein from Mus musculus	6.1e-62
BLAST match view associations BLAST with Foxa2 Foxa2 Foxa2 forkhead box A2	gene from Rattus norvegicus	6.1e-62
BLAST match view associations BLAST with foxa1-b foxa1-b foxa1-b Forkhead box protein A1-B	protein from Xenopus laevis	1.3e-61
BLAST match view associations BLAST with foxa3 foxa3 foxa3 forkhead box A3	gene_product from Danio rerio	2.6e-61
BLAST match view associations BLAST with Foxa2 Foxa2 Foxa2 forkhead box A2	protein from Mus musculus	5.5e-61
BLAST match view associations BLAST with Foxa1 Foxa1 Foxa1 forkhead box A1	gene from Rattus norvegicus	6.9e-61
BLAST match view associations BLAST with foxa1 foxa1 foxa1 Forkhead box protein A1	protein from Xenopus (Silurana) tropicalis	1.8e-60
BLAST match view associations BLAST with foxa4 foxa4 foxa4 Forkhead box protein A4	protein from Xenopus (Silurana) tropicalis	4.9e-53
BLAST match view associations BLAST with foxa4-b foxa4-b foxa4-b Forkhead box protein A4-B	protein from Xenopus laevis	8.0e-53
BLAST match view associations BLAST with foxa4-a foxa4-a foxa4-a Forkhead box protein A4-A	protein from Xenopus laevis	2.1e-52
BLAST match view associations BLAST with Foxa3 Foxa3 Foxa3 forkhead box A3	gene from Rattus norvegicus	3.1e-51
BLAST match view associations BLAST with Foxa3 Foxa3 Foxa3 forkhead box A3	protein from Mus musculus	6.5e-51
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Hepatocyte nuclear factor 3-gamma	protein from Bos taurus	1.7e-50
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Hepatocyte nuclear factor 3-gamma	protein from Homo sapiens	3.6e-50
BLAST match view associations BLAST with FOXA3 FOXA3 FOXA3 Uncharacterized protein	protein from Canis lupus familiaris	2.5e-49
BLAST match view associations BLAST with LOC100512416 LOC100512416 LOC100512416 Uncharacterized protein	protein from Sus scrofa	3.2e-49
BLAST match view associations BLAST with foxa foxa foxa forkhead box A sequence	gene_product from Danio rerio	8.8e-47
BLAST match view associations BLAST with pha-4 pha-4 pha-4	gene from Caenorhabditis elegans	3.0e-46
BLAST match view associations BLAST with pha-4 pha-4 pha-4 Defective pharyngeal development protein 4	protein from Caenorhabditis elegans	3.0e-46
BLAST match view associations BLAST with Foxb2 Foxb2 Foxb2 forkhead box B2	protein from Mus musculus	1.6e-43
BLAST match view associations BLAST with foxb2 foxb2 foxb2 forkhead box B2	gene_product from Danio rerio	2.5e-43
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Uncharacterized protein	protein from Canis lupus familiaris	3.2e-43
BLAST match view associations BLAST with LOC100156565 LOC100156565 LOC100156565 Uncharacterized protein	protein from Sus scrofa	5.2e-43
BLAST match view associations BLAST with foxb1 foxb1 foxb1 Foxb1 protein	protein from Xenopus (Silurana) tropicalis	6.7e-43
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Forkhead box protein B2	protein from Homo sapiens	8.5e-43
BLAST match view associations BLAST with foxb1 foxb1 foxb1 Forkhead box protein B1	protein from Xenopus laevis	1.8e-42
BLAST match view associations BLAST with fkh1 fkh1 fkh1 Winged helix transcription factor Forkhead-1	protein from Strongylocentrotus purpuratus	1.8e-42
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Bos taurus	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Canis lupus familiaris	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Forkhead box protein B1	protein from Homo sapiens	2.8e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Uncharacterized protein	protein from Ailuropoda melanoleuca	2.8e-41
BLAST match view associations BLAST with Foxb1 Foxb1 Foxb1 forkhead box B1	protein from Mus musculus	2.8e-41
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Gallus gallus	3.2e-41
BLAST match view associations BLAST with LOC100301603 LOC100301603 LOC100301603 Forkhead box B1.2	protein from Oryzias latipes	7.5e-41
BLAST match view associations BLAST with foxb1a foxb1a foxb1a forkhead box B1a	gene_product from Danio rerio	9.6e-41
BLAST match view associations BLAST with FOXB1 FOXB1 FOXB1 Chromosome 13 SCAF14555, whole genome shotgun sequence.	protein from Tetraodon nigroviridis	1.2e-40
BLAST match view associations BLAST with foxb1b foxb1b foxb1b forkhead box B1b	gene_product from Danio rerio	3.3e-40
BLAST match view associations BLAST with foxb2 foxb2 foxb2 Forkhead box protein B2	protein from Xenopus laevis	4.2e-40
BLAST match view associations BLAST with Ci-FoxC Ci-FoxC Ci-FoxC Transcription factor protein	protein from Ciona intestinalis	5.8e-40
BLAST match view associations BLAST with foxc2 foxc2 foxc2 Forkhead box protein C2	protein from Xenopus (Silurana) tropicalis	2.3e-39
BLAST match view associations BLAST with foxB foxB foxB FoxB protein	protein from Ciona intestinalis	2.9e-39
BLAST match view associations BLAST with Foxc1 Foxc1 Foxc1 forkhead box C1	protein from Mus musculus	3.7e-39
BLAST match view associations BLAST with FOXC1 FOXC1 FOXC1 Forkhead box protein C1	protein from Homo sapiens	4.8e-39
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Forkhead box protein C2	protein from Homo sapiens	1.6e-38
BLAST match view associations BLAST with foxc1b foxc1b foxc1b forkhead box C1b	gene_product from Danio rerio	1.6e-38
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Bos taurus	2.1e-38
BLAST match view associations BLAST with FOXC2 FOXC2 FOXC2 Uncharacterized protein	protein from Canis lupus familiaris	2.1e-38
BLAST match view associations BLAST with Foxc2 Foxc2 Foxc2 forkhead box C2	protein from Mus musculus	2.6e-38
BLAST match view associations BLAST with Foxc1 Foxc1 Foxc1 forkhead box C1	gene from Rattus norvegicus	3.2e-38
BLAST match view associations BLAST with fd96Ca fd96Ca fd96Ca forkhead domain 96Ca	protein from Drosophila melanogaster	3.4e-38
BLAST match view associations BLAST with foxc1 foxc1 foxc1 Forkhead box protein C1	protein from Xenopus (Silurana) tropicalis	3.4e-38
BLAST match view associations BLAST with foxc2-a foxc2-a foxc2-a Forkhead box protein C2-A	protein from Xenopus laevis	3.4e-38
BLAST match view associations BLAST with foxc1a foxc1a foxc1a forkhead box C1a	gene_product from Danio rerio	3.4e-38
BLAST match view associations BLAST with croc croc croc crocodile	protein from Drosophila melanogaster	3.5e-38
BLAST match view associations BLAST with foxc2-b foxc2-b foxc2-b Forkhead box protein C2-B	protein from Xenopus laevis	5.5e-38
BLAST match view associations BLAST with foxe4 foxe4 foxe4 Forkhead box protein E4	protein from Xenopus laevis	9.3e-38
BLAST match view associations BLAST with foxc1-b foxc1-b foxc1-b Forkhead box protein C1-B	protein from Xenopus laevis	1.1e-37
BLAST match view associations BLAST with foxc1-a foxc1-a foxc1-a Forkhead box protein C1-A	protein from Xenopus laevis	1.1e-37
BLAST match view associations BLAST with FOXD1 FOXD1 FOXD1 Forkhead box protein D1	protein from Homo sapiens	1.2e-37
BLAST match view associations BLAST with FOXB2 FOXB2 FOXB2 Uncharacterized protein	protein from Bos taurus	1.9e-37
BLAST match view associations BLAST with Foxc2 Foxc2 Foxc2 forkhead box C2	gene from Rattus norvegicus	3.9e-37
BLAST match view associations BLAST with LOC100626570 LOC100626570 LOC100626570 Uncharacterized protein	protein from Sus scrofa	1.0e-36
BLAST match view associations BLAST with FOXD3 FOXD3 FOXD3 Forkhead box protein D3	protein from Gallus gallus	2.2e-36
BLAST match view associations BLAST with lin-31 lin-31 lin-31	gene from Caenorhabditis elegans	4.4e-36
BLAST match view associations BLAST with lin-31 lin-31 lin-31 Protein lin-31	protein from Caenorhabditis elegans	4.4e-36
BLAST match view associations BLAST with Foxd1 Foxd1 Foxd1 forkhead box D1	protein from Mus musculus	7.2e-36
BLAST match view associations BLAST with fd96Cb fd96Cb fd96Cb forkhead domain 96Cb	protein from Drosophila melanogaster	9.2e-36
BLAST match view associations BLAST with FOXF2 FOXF2 FOXF2 Uncharacterized protein	protein from Canis lupus familiaris	1.5e-35
BLAST match view associations BLAST with FOXF2 FOXF2 FOXF2 Forkhead box protein F2	protein from Homo sapiens	2.4e-35
BLAST match view associations BLAST with Foxf2 Foxf2 Foxf2 forkhead box F2	protein from Mus musculus	3.9e-35
BLAST match view associations BLAST with foxd2 foxd2 foxd2 Forkhead box protein D2	protein from Xenopus laevis	5.1e-35
BLAST match view associations BLAST with foxd1 foxd1 foxd1 forkhead box D1	gene_product from Danio rerio	5.1e-35
BLAST match view associations BLAST with foxe3 foxe3 foxe3 forkhead box E3	gene_product from Danio rerio	5.1e-35
BLAST match view associations BLAST with FOXD4L1 FOXD4L1 FOXD4L1 Uncharacterized protein	protein from Bos taurus	2.7e-34
BLAST match view associations BLAST with foxd2 foxd2 foxd2 forkhead box D2	gene_product from Danio rerio	5.8e-34
BLAST match view associations BLAST with foxe1 foxe1 foxe1 forkhead box E1 (thyroid transcription factor 2)	gene_product from Danio rerio	1.5e-33