BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4474
(2174 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6ZWR6|SYNE1_MOUSE Nesprin-1 OS=Mus musculus GN=Syne1 PE=1 SV=2
Length = 8799
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 121/620 (19%), Positives = 250/620 (40%), Gaps = 92/620 (14%)
Query: 234 LKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQ 293
L+ + W Y E + L W++ +++L ++L+ L EK + L +++I +A H
Sbjct: 2726 LESVIDQWNDYLEKKSQLEQWMESVDQRLEHPLQLQPGLKEKFSLLDHFQSIVSEAEDHT 2785
Query: 294 QDLLQLKDKIESLHQPSEQSKQQLAT---ITTRHGNVLKRAQKFTEAYEGIVSIHQAYTK 350
L QL K L+Q ++ + A + T+ +++ A++ E +V H Y
Sbjct: 2786 GALQQLAAKSRELYQKTQDESFKEAGQEELRTQFQDIMTVAKEKMRTVEDLVKDHLMYLD 2845
Query: 351 AVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNL----EKELGRIGHKTVALKNN 406
AV + +W+ + ++ W D + + + L ++K L E GR+ + +L
Sbjct: 2846 AVQEFADWLHSAKEELHRWSDTSGDPSATQKKLLKIKELIDSREIGAGRLS-RVESLAPA 2904
Query: 407 VLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIW----NDFLSSKNTLE 462
V ++T G E +N E+ + DW ++ L +S +F LE
Sbjct: 2905 VKQNTAASGCELLNSEMQALRADWRQWEDCLFQTQSSLESLVSEMALSEQEFFGQVTQLE 2964
Query: 463 KWIEGFQKKIE-------------AEKDIGDCTN-----LDDLEKYKALLQEVISHNSDM 504
+ +E F ++ ++++I +C + LD L+K + + +++ S
Sbjct: 2965 QALEQFCTLLKTWAQQLTLLEGKNSDEEILECWHKGREILDALQKAEPMTEDLKSQ---- 3020
Query: 505 ETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEE 564
LN+ C +L SP E+ L Y L E+ L Q F
Sbjct: 3021 --LNELCRFSRDL---SPYSEKVSGLIKEYNCLCLQASKGCQNKEQIL--QERFQKASRG 3073
Query: 565 VEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPE-------GQHLMSVLQDTFT 617
+ WL A T +C L + L V+ ++I E GQH ++ + F
Sbjct: 3074 FQQWLVNAKITTAKCFD------LPQNLSEVSSSLQKIQEFLSESENGQHKLNTM--LFK 3125
Query: 618 KALDTT--PSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNM 675
L ++ ++ +++ + ++ W + +L + L++ + + +
Sbjct: 3126 GELLSSLLTEEKAQAVQAKVLTAKEEWKSFHANLHQKESALENLKIQMKDFEVSAELVQN 3185
Query: 676 WLSGVENKLNEPSPVFTEIDLNTKWQQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERS 735
WLS E + E S ++ + QQ +
Sbjct: 3186 WLSKTERLVQESSNRLYDLPAKRREQQKLQS----------------------------- 3216
Query: 736 KHIVDDIEKKKDDLKPIQKEAQQLSEWDS---SIVPKVSDLETRWAAVKSAWDAKHSDLS 792
++++I+ + L ++++A+QL E + S V +VS L +++ A+ + K S L
Sbjct: 3217 --VLEEIQCYEPQLHRLKEKARQLWEGQAASKSFVHRVSQLSSQYLALSNVTKEKVSRLD 3274
Query: 793 SEIAQYSSYQNAVQDAEKWL 812
IA+++ + V++ + W+
Sbjct: 3275 RIIAEHNRFSQGVKELQDWM 3294
Score = 58.2 bits (139), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 151/875 (17%), Positives = 353/875 (40%), Gaps = 155/875 (17%)
Query: 7 LHVMSKEVINRWQGLVYDPKPI-----VDFRYQLLHVMSKEVINRWQGLVYDHKLYNDVY 61
LH + ++ W+G + + +Y L ++KE ++R ++ +H ++
Sbjct: 3228 LHRLKEKARQLWEGQAASKSFVHRVSQLSSQYLALSNVTKEKVSRLDRIIAEHNRFSQGV 3287
Query: 62 VKTDDWLTGLEKDLDTLKNTTD----VEAKNSLLQKLLTEKDQAGHKLTYLTSSGEKLYL 117
+ DW++ LD+ T ++++ L+ LL+ + + ++ + + GE +
Sbjct: 3288 KELQDWMSDAVHMLDSYCLPTSDKSVLDSRMLKLEALLSVRQEKEIQMKMVVTRGEYVLQ 3347
Query: 118 DTAAKGREVVRQQLRALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQINKDQALEKAI 177
T+ +G V+QQL+A++D
Sbjct: 3348 STSLEGSAAVQQQLQAVKD----------------------------------------- 3366
Query: 178 VSVNKRYEDLVDGILKTISQLEESLDIFQQFQQLQKAYQEDQKQLWDKLSSLTERELKGK 237
+E L+ ++ SQLE +L + +YQ+D +Q
Sbjct: 3367 -----MWESLLSAAIRCKSQLEGALSKW-------TSYQDDVRQ---------------- 3398
Query: 238 LSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDL- 296
SSW +D ++V+ L + + T L EK L + + ++ SH L
Sbjct: 3399 FSSW----------MDSVEVS---LTESEKQHTELREKITALGKAKLLNEEVLSHSSLLE 3445
Query: 297 -LQLKDKIESLHQPSEQSKQQLATITTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDT 355
+++K + H ++ +L + RH + ++A++ E +V +HQ Y + +
Sbjct: 3446 TIEVKRAAMTEHYVTQ---LELQDLQERHQALKEKAKEAVTKLEKLVRLHQEYQRDLKAF 3502
Query: 356 QEWIDATYNAVNMWGDLTLERVSLH-----SNLERLKNLEKELGRIGHKTVALKNNVLES 410
+ W++ L+R S+H ++ L++L+ EL + AL N+VL +
Sbjct: 3503 ESWLEQEQE--------KLDRCSVHEGDTNAHETMLRDLQ-ELQVRCAEGQALLNSVLHT 3553
Query: 411 TGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEK------- 463
+ + Q +++ +L+ QV A+ N+ ++ +E+
Sbjct: 3554 REDVIPSGLPQAEDRVL---ESLRQDWQVYQHRLAEARMQLNNVVNKLRLMEQKFQQADE 3610
Query: 464 WIEGFQKKIEAEKDIGDCTNLDDLE--KYKALLQEVISHNSDMETLNDKCEALM-ELAAH 520
W++ ++KI + + +++ + K +++ +H ++E + + + ++ E
Sbjct: 3611 WLKRMEEKINFRSECQSSRSDKEIQLLQLKKWHEDLSAHRDEVEEVGTRAQGILDETHIS 3670
Query: 521 SPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQECA 580
S + + +L + Y AL+ V + E+ L E + W H + A
Sbjct: 3671 SRMGCQATQLTSRYQALLLQVLEQIKFFEEELQCLEETESSLSSYSDWYGSTHKNFKNVA 3730
Query: 581 GNGSK---NVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAMTV 637
K +++ ++L T+ ++ + + +G L+ ++ +A+ + ++LR+ +
Sbjct: 3731 TKIDKVDESMMGKKLKTLEVLLKDMEKGHSLLKSAREKGERAMKFLAEHEAEALRKEIHT 3790
Query: 638 LRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEPSPVFTEIDLN 697
+ L ++ L+ + E D Y W++ + L P E+
Sbjct: 3791 YMEQLKNLTSTVRKECMSLEKGLHLAKEFSDKYKVLAQWMAEYQEILCTPEEPKMEL--- 3847
Query: 698 TKWQQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQ 757
+E +Q L +S + +L + EK + L+ +Q
Sbjct: 3848 ------------YEKKAQ-----LSKYKSLQQMVLSHEPSVTSVQEKSEALLELVQ---- 3886
Query: 758 QLSEWDSSIVPKVSDLETRWAAVKSAWDAKHSDLSSEIAQYSSYQNAVQDAEKWLLQISF 817
D S+ K+ L++ + + S + L +++ + Y +Q+ EKWLLQ+S
Sbjct: 3887 -----DQSLKDKIQKLQSDFQDLCSRAKERVFSLEAKVKDHEDYNTELQEVEKWLLQMSG 3941
Query: 818 QLMAHNSLYINNRQQTLEQIQHHEKLLQDYSSYQN 852
+L+A + L +++ + +Q+ HH+ ++++ + +++
Sbjct: 3942 RLVAPDLLEMSSLETITQQLAHHKAMMEEIAGFED 3976
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 106/227 (46%), Gaps = 5/227 (2%)
Query: 913 GSPIKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGD 972
G P+ KI +L + + + ++ L LNQ + H +E+ +E V +++ +V V G+
Sbjct: 5492 GQPLAKKIGKLTELHQQTIRQAENRLSKLNQALSHMEEYNEMLETVRKWIEKAKVLVHGN 5551
Query: 973 VKTNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHM-NLNDADRLTVNDSVSSMQK 1031
+ N+ LQE + L EE+GE++ + ++ +H+ N+ +L+ V+ +
Sbjct: 5552 IAWNSASQLQEQYILHQTLLEESGEIDSDLEAMAEKVQHLANVYCTGKLS--QQVTQFGR 5609
Query: 1032 RYAQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLARPVSTQAEDISEALT 1091
+L + I R+ + + + +K+ + ++ + L++A++ L P + E L
Sbjct: 5610 EMEELRQAIRVRLRNLQDAAKDMKKFEGELRNLQVALEQAQTILTSP-EVGRRSLKEQLC 5668
Query: 1092 VYQKLLDEINSWKNSQSDEDLVHLADSIKPLDEVVERIENHAVPKLK 1138
Q LL E+ S K L A I P D V HA +L+
Sbjct: 5669 HRQHLLSEMESLKPKMQAVQLCQSALRI-PEDVVASLPLCHAALRLQ 5714
Score = 51.6 bits (122), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/209 (21%), Positives = 93/209 (44%), Gaps = 2/209 (0%)
Query: 488 EKYKALLQEVISHNSDMETLNDKCEALME-LAAHSPIREETLRLQALYAALVTSVQGLVS 546
+K +++L+E+ + + L +K L E AA +L + Y AL + VS
Sbjct: 3212 QKLQSVLEEIQCYEPQLHRLKEKARQLWEGQAASKSFVHRVSQLSSQYLALSNVTKEKVS 3271
Query: 547 QVEKNLSDQTEFLAKKEEVEAWLHKA-HATVQECAGNGSKNVLKERLDTVNMVAERIPEG 605
++++ +++ F +E++ W+ A H C K+VL R+ + + E
Sbjct: 3272 RLDRIIAEHNRFSQGVKELQDWMSDAVHMLDSYCLPTSDKSVLDSRMLKLEALLSVRQEK 3331
Query: 606 QHLMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNE 665
+ M ++ L +T + ++++ + ++D W+ L +QL+ +++W
Sbjct: 3332 EIQMKMVVTRGEYVLQSTSLEGSAAVQQQLQAVKDMWESLLSAAIRCKSQLEGALSKWTS 3391
Query: 666 LDDLYNRFNMWLSGVENKLNEPSPVFTEI 694
D +F+ W+ VE L E TE+
Sbjct: 3392 YQDDVRQFSSWMDSVEVSLTESEKQHTEL 3420
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 1854 LEKYKALLQEVISHNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVS 1913
L KYK+L Q V+SH + ++ +K EAL+EL ++++ +LQ+ + L + + V
Sbjct: 3854 LSKYKSLQQMVLSHEPSVTSVQEKSEALLELVQDQSLKDKIQKLQSDFQDLCSRAKERVF 3913
Query: 1914 QVEKNLSDQTEFLAKKEEVEAWL 1936
+E + D ++ + +EVE WL
Sbjct: 3914 SLEAKVKDHEDYNTELQEVEKWL 3936
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 75/405 (18%), Positives = 158/405 (39%), Gaps = 46/405 (11%)
Query: 1355 YETLKKNIAEAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKA 1414
Y++L + E + + EHEA ++A + ++ + G ++T + +
Sbjct: 2603 YQSLLRVTKEKLRSCQLALKEHEALEEATQSMWARVKDVQDRLACAESTLGNKETLEGRL 2662
Query: 1415 DKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQDI 1474
+I+ I EG+ ++ + + L S+ G++ I ++ + W N+
Sbjct: 2663 SQIQDILLMKGEGEVKLNLAIGKGDQALRSSNKEGQQAIQDQLEMLKKAWAEAMNSAVHA 2722
Query: 1475 DKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNLDDLEKYKALLQEGLHK 1534
+ WND+L K+ LE+W+E +++E + LQ GL +
Sbjct: 2723 QSTLESVIDQWNDYLEKKSQLEQWMESVDQRLE----------------HPLQLQPGLKE 2766
Query: 1535 EADNKKVLIDSF---------NKGIIGMTELESEEV------KDLIQVGVHGLQVELNAL 1579
K L+D F + G + +S E+ + + G L+ + +
Sbjct: 2767 ----KFSLLDHFQSIVSEAEDHTGALQQLAAKSRELYQKTQDESFKEAGQEELRTQFQDI 2822
Query: 1580 LQNIEAEINKVANAAQERKAMQDKISKLQSW-------LKQYIDYSGNKQALQSRLDKVN 1632
+ + ++ V + ++ D + + W L ++ D SG+ A Q +L K+
Sbjct: 2823 MTVAKEKMRTVEDLVKDHLMYLDAVQEFADWLHSAKEELHRWSDTSGDPSATQKKLLKIK 2882
Query: 1633 EIQESFPEISTKLQTLSDHIENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSLSDVKQGL 1692
E+ +S + +L + + + E + ++ LR D+ + L + L
Sbjct: 2883 ELIDSREIGAGRLSRVESLAPAVKQNTAASGCELLNSEMQALRADWRQWEDCLFQTQSSL 2942
Query: 1693 ESRLVQW----NEYETSLGKLITWLNDTENVLKNFTLQPTLNEKK 1733
ES + + E+ + +L L +LK + Q TL E K
Sbjct: 2943 ESLVSEMALSEQEFFGQVTQLEQALEQFCTLLKTWAQQLTLLEGK 2987
Score = 45.1 bits (105), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 77/364 (21%), Positives = 163/364 (44%), Gaps = 29/364 (7%)
Query: 343 SIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKEL--GRIGHKT 400
S+ + ++ ++ + QEW A +LT + L + L L+ + L G+
Sbjct: 2404 SLEKHFSGSMKEFQEWFLGAKAAARESSNLTGDSQILEARLHNLQGVLDSLSDGQSKLDV 2463
Query: 401 VALKNNVLESTGPIGKENINQEINQITLDWTNLQNTL-QVIDKHHA--KCLSIWNDFLSS 457
V + L + P K+ ++ QIT Q L Q + + A C+S F
Sbjct: 2464 VTQEGQTLYAHLP--KQIVSSIQEQITKANEEFQAFLKQCLKEKQALQDCVSELGSFEDQ 2521
Query: 458 KNTLEKWIEGFQKKIEAEKDIGDCTNL-----DDLEKYKALLQEVISHNSDMETLNDKCE 512
L WI +++++ E ++G+ + +++ K + L E+++ ++ L+ + +
Sbjct: 2522 HRKLNLWIHEMEERLKTE-NLGESKHHISEKKNEVRKVEMFLGELLAARESLDKLSQRGQ 2580
Query: 513 ALMELAAHSPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKA 572
L E +HS + Q L+TS Q L+ ++ L L + E +E
Sbjct: 2581 LLSE-ESHSAGKGGCRSTQ-----LLTSYQSLLRVTKEKLRSCQLALKEHEALEEATQSM 2634
Query: 573 HATVQE------CAGN--GSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTP 624
A V++ CA + G+K L+ RL + + EG+ +++ +AL ++
Sbjct: 2635 WARVKDVQDRLACAESTLGNKETLEGRLSQIQDILLMKGEGEVKLNLAIGKGDQALRSSN 2694
Query: 625 SDQQDSLREAMTVLRDSW-DRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENK 683
+ Q ++++ + +L+ +W + +N + + ST L+S I +WN+ + ++ W+ V+ +
Sbjct: 2695 KEGQQAIQDQLEMLKKAWAEAMNSAVHAQST-LESVIDQWNDYLEKKSQLEQWMESVDQR 2753
Query: 684 LNEP 687
L P
Sbjct: 2754 LEHP 2757
Score = 40.0 bits (92), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 32 RYQLLHVMSKEVINRWQGLVYDHKLYNDVYVKTDDWLTGLEKDL----DTLKNTTDVEAK 87
++Q + ++KE + + LV DH +Y D + DWL +++L DT + + + K
Sbjct: 2818 QFQDIMTVAKEKMRTVEDLVKDHLMYLDAVQEFADWLHSAKEELHRWSDTSGDPSATQKK 2877
Query: 88 NSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALR 135
+++L+ ++ +L+ + S + +TAA G E++ +++ALR
Sbjct: 2878 LLKIKELIDSREIGAGRLSRVESLAPAVKQNTAASGCELLNSEMQALR 2925
Score = 35.4 bits (80), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 152/717 (21%), Positives = 283/717 (39%), Gaps = 131/717 (18%)
Query: 203 DIFQQFQQLQKAYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVTEKKL 262
D +Q + K++Q Q ++ +K+ + L+G L SW YE SV +L W E+KL
Sbjct: 6994 DFAEQLGAMNKSWQLLQGRVGEKI-----QMLEGLLESWSEYENSVQSLKAWFANQERKL 7048
Query: 263 GDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQSKQQ-LATIT 321
K+ L R ++A +D +L+D I++ + E+ +Q LA I
Sbjct: 7049 ------------KEQHLLGDRNSVENAL---KDCQELEDLIKAKEKEVEKIEQNGLALIQ 7093
Query: 322 TRH----GNVLKRAQKFTEAYEGI-VSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLER 376
+ G+V+ Q+ + + + ++ Q + +W + + G L R
Sbjct: 7094 NKREEVSGSVMSTLQELRQTWISLDRTVEQLKIQLTSALGQWSNHKAACDEINGHLMEAR 7153
Query: 377 VSLH----------------SNLERLKN-LEKELGRIGHKTVALKNNVLESTGPIGKENI 419
SL NL+ L + LEK+ G + K ++ N +L+ P E +
Sbjct: 7154 YSLSRFRLLTGSSEAVQVQVDNLQNLHDELEKQEGGL-QKFGSITNQLLKECHPPVAETL 7212
Query: 420 NQEINQITLDWTNLQNTLQVIDKHHAK--CLSIWNDFLSSKNTLEKWIEGFQK------- 470
+ + ++ + W NL ++ ++ H+ L +W + K+ ++ Q+
Sbjct: 7213 SSTLQEVNMRWNNLLE--EIAEQLHSSKALLQLWQRY---KDYSKQCASAIQRQEEQTSV 7267
Query: 471 --KIEAEKDIGDCTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMEL----------A 518
K KDI D D++ K+ +Q+ +ET+ D L EL +
Sbjct: 7268 LLKAATNKDIAD----DEVTKW---IQDCNDLLKGLETVKDSLFILRELGEQLGQQVDVS 7320
Query: 519 AHSPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQE 578
A + I+ E L AL ++ + ++ + D F E +E W+ +A +Q
Sbjct: 7321 AAAAIQCEQLCFSQRLGALEQALCKQQAVLQAGVVDYETFAKSLEALEVWMVEAEGILQ- 7379
Query: 579 CAGNGSKNVLKERLDTVNMVAERIPE--GQHL-MSVLQ---DTFTKALDTTPSDQQDSLR 632
G L T+ ER+ E GQ L S L D + P + ++ R
Sbjct: 7380 ----GQDPTHSSDLSTIQ---ERMEELKGQMLKFSSLAPDLDRLNELGYRLPLNDKEIKR 7432
Query: 633 EAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEPSPVFT 692
M L W + ++L+S++ + + + +L E+KL
Sbjct: 7433 --MQNLNRHWSLTSSQTTERFSKLQSFLLQHQTFLEKCETWMEFLVQTEHKLA------V 7484
Query: 693 EIDLNTKW---QQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDL 749
EI N + QQ ++ + E S+ Q L +I D + LLE+ + VDD E+
Sbjct: 7485 EISGNYQHLLEQQRAHELFQAEMFSRQ--QILHSIIVDGQNLLEQGQ--VDDREE----- 7535
Query: 750 KPIQKEAQQLSEWDSSIVPKVSDLETRWAAVKSAWDAKHSDLSSEIAQYSSYQNAVQDAE 809
K++ L +W V + + S+I Q+ Y+ +
Sbjct: 7536 ----------------FSLKLTLLSNQWQGVIRRAQQRRGIIDSQIRQWQRYREMAEKLR 7579
Query: 810 KWLLQIS---FQLMAHNSLYINNRQQTLEQIQHHEK-LLQDYSSYQNAVQDAEKWLL 862
KWL ++S + + + + + +++Q EK L+ SY V+ ++ LL
Sbjct: 7580 KWLAEVSHLPLSGLGNIPVPLQQVRMLFDEVQFKEKVFLRQQGSYILTVEAGKQLLL 7636
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 57/285 (20%), Positives = 120/285 (42%), Gaps = 21/285 (7%)
Query: 412 GPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKK 471
GP K + ++ I T L++TL+ K S W+ F S+ TL WI +K+
Sbjct: 1407 GPRNKRVLQRQAKSIKEQVTTLEDTLEEDIKTMEMVKSKWDHFGSNFETLSIWI--LEKE 1464
Query: 472 IEAEKDIGDCTNLD-DLEKYKALLQEVISHNSDMETLNDKCEALMELAA---HSPIREET 527
E + D + + K +QE+ S + L ++ ++ + + I+ +
Sbjct: 1465 NELSSLEASASAADVQISQIKVTIQEIESKIDSIVGLEEEAQSFAQFVTTGESARIKAKL 1524
Query: 528 LRLQALYAALVTSVQGLVSQVEKNLSDQTEF---LAK-KEEVEAWLHKAHATVQECAGNG 583
+++ + L +GL + +LS Q +F L K ++ V + + ++ C+
Sbjct: 1525 TQIRRYWEELQEHARGLEGTILGHLSQQQKFEENLRKIRQSVSEFAERLADPIKICSSAA 1584
Query: 584 -SKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSW 642
+ VL+E +D + + + +++ + KA++ ++S + L+ +
Sbjct: 1585 ETYKVLQEHMD----LCQAVESLSSTVTMFSASAQKAVN------RESCTQEAAALQQQY 1634
Query: 643 DRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEP 687
+ + K T L+ +ARW L+ + F WL E + P
Sbjct: 1635 EEILHKAKEMQTALEDLLARWQRLEKGLSPFLTWLERCEAIASSP 1679
Score = 34.7 bits (78), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 57/288 (19%), Positives = 116/288 (40%), Gaps = 33/288 (11%)
Query: 1446 GPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKK 1505
GP K + ++ I T L++TL++ K S W+ F S+ TL WI +K+
Sbjct: 1407 GPRNKRVLQRQAKSIKEQVTTLEDTLEEDIKTMEMVKSKWDHFGSNFETLSIWI--LEKE 1464
Query: 1506 IESEKDIGDCTNLD-DLEKYKALLQEGLHKEADNKKVLIDSFNKGIIGMTELESEEVKDL 1564
E + D + + K +QE I+S I+G+ EE +
Sbjct: 1465 NELSSLEASASAADVQISQIKVTIQE------------IESKIDSIVGL----EEEAQSF 1508
Query: 1565 IQVGVHGLQVELNALLQNIEA------------EINKVANAAQERKAMQDKISKLQSWLK 1612
Q G + A L I E + + +Q++K ++ + K++ +
Sbjct: 1509 AQFVTTGESARIKAKLTQIRRYWEELQEHARGLEGTILGHLSQQQK-FEENLRKIRQSVS 1567
Query: 1613 QYIDYSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTN-EAMYRDL 1671
++ + + + S + ++ + ++ +++LS + S N E+ ++
Sbjct: 1568 EFAERLADPIKICSSAAETYKVLQEHMDLCQAVESLSSTVTMFSASAQKAVNRESCTQEA 1627
Query: 1672 ANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLITWLNDTENV 1719
A L+ +E+ + +++ LE L +W E L +TWL E +
Sbjct: 1628 AALQQQYEEILHKAKEMQTALEDLLARWQRLEKGLSPFLTWLERCEAI 1675
Score = 34.7 bits (78), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 61/146 (41%), Gaps = 2/146 (1%)
Query: 558 FLAKKEEVEAWLHKAHATVQECAGNGS-KNVLKERLDTVNMVAERIPEGQHLMSVLQDTF 616
FL E WL + T + +G V KE L ++ E + ++ +
Sbjct: 8007 FLDDYSRFEDWLEVSERTAAFPSSSGVLYTVAKEELKKFEAFQRQVHESLTQLELINKQY 8066
Query: 617 TKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMW 676
+ +D SLR+ + WD L + + S +LK +I++ E + + +W
Sbjct: 8067 RRLARENRTDSACSLRQMVHGGNQRWDDLQKRVTSILRRLKHFISQREEFETARDSILVW 8126
Query: 677 LSGVENKLNEPSPVFTEIDLNTKWQQ 702
L+ ++ +L F+E D+ K +Q
Sbjct: 8127 LTEMDLQLTNIEH-FSECDVQAKIKQ 8151
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 61.6 bits (148), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 72/327 (22%), Positives = 142/327 (43%), Gaps = 33/327 (10%)
Query: 384 ERLKNLEKELGRIGHKTVALKNN---VLESTGPIGKENINQEINQITLDWTNLQNTLQVI 440
E LKN++ L +I + + N L S P + + + ++++ W + N +
Sbjct: 2038 ESLKNIKDSLQQISGRIDIIHNKKTAALHSATPAERAKLQEALSRLDFQWERVNNMYKDR 2097
Query: 441 DKHHAKCLSIWNDFLSSKNTLEKWI---EGFQKKIEAEKDIGDCTNLDDLEKYKALLQE- 496
+ + W F L +W+ E F KK + ++ KYK L+E
Sbjct: 2098 QGRFDRSVEKWRRFHYDMKILNQWLTEAEQFLKKTQIPENWEHA-------KYKWYLKEL 2150
Query: 497 ---VISHNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQV---EK 550
+ S + LN E +++ ++ + + LQ +L Q + Q+ +K
Sbjct: 2151 QDGIGQRQSVVRVLNATGEEIIQQSSKT----DASILQEKLGSLNLRWQEVCKQLAERKK 2206
Query: 551 NLSDQ----TEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQ 606
L +Q +EF E WL +A G++ LKE+L+ V ++AE +P Q
Sbjct: 2207 RLEEQKNILSEFQRDVNEFVLWLEEADNVANIPLEPGNEQQLKEKLEQVKLLAEELPLRQ 2266
Query: 607 HLMSVLQDTFTKALDTTP--SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWN 664
++ L +T L + P ++QD L + W +++R+L ++++++
Sbjct: 2267 GILKQLNETGGTVLVSAPLSPEEQDKLENKLKQTNLQWIKVSRNLPEKQEEIEAHVKDLG 2326
Query: 665 ELDDLYNRFNMWLSGVENKL---NEPS 688
+L++ N +WLS + N+L N+P+
Sbjct: 2327 QLEEQLNHLLLWLSPIRNQLEIYNQPN 2353
Score = 36.6 bits (83), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 67/358 (18%), Positives = 141/358 (39%), Gaps = 27/358 (7%)
Query: 1381 QAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNN 1440
QA +E + L L AQ D ++++ K+ D ++QI+ ID K
Sbjct: 2011 QALSEVEELLNAPDLCAQDFEDLFKQEESLKNIKDSLQQISGR-------IDIIHNKKTA 2063
Query: 1441 VLESTGPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWI- 1499
L S P + + + ++++ W + N +D + + W F L +W+
Sbjct: 2064 ALHSATPAERAKLQEALSRLDFQWERVNNMYKDRQGRFDRSVEKWRRFHYDMKILNQWLT 2123
Query: 1500 --EGFQKKIESEKDIGDCTNLDDLEKYKALLQEGLHKEADNKKVLIDSFNKGIIGMTELE 1557
E F KK + ++ KYK L+E L ++ ++ N + +
Sbjct: 2124 EAEQFLKKTQIPENWEHA-------KYKWYLKE-LQDGIGQRQSVVRVLNATGEEIIQQS 2175
Query: 1558 SEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWLKQYIDY 1617
S+ ++Q + L + + + + ++ Q +++ WL++ +
Sbjct: 2176 SKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEEQKNILSEFQRDVNEFVLWLEEADNV 2235
Query: 1618 S------GNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIEN--SSRKLPSRTNEAMYR 1669
+ GN+Q L+ +L++V + E P L+ L++ S L + +
Sbjct: 2236 ANIPLEPGNEQQLKEKLEQVKLLAEELPLRQGILKQLNETGGTVLVSAPLSPEEQDKLEN 2295
Query: 1670 DLANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLITWLNDTENVLKNFTLQP 1727
L + K +L + ++ +E+ + + E L L+ WL+ N L+ + QP
Sbjct: 2296 KLKQTNLQWIKVSRNLPEKQEEIEAHVKDLGQLEEQLNHLLLWLSPIRNQLEIYN-QP 2352
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 135/323 (41%), Gaps = 25/323 (7%)
Query: 384 ERLKNLEKELGRIGHKTVALKNN---VLESTGPIGKENINQEINQITLDWTNLQNTLQVI 440
E LKN++ L +I + + N L+S P+ + + + ++Q+ W + +
Sbjct: 2032 ESLKNIKDSLQQISGRVDIIHNKKTAGLQSATPVERTRLQEALSQLDFQWERVNKMYKDR 2091
Query: 441 DKHHAKCLSIWNDFLSSKNTLEKWI---EGFQKKIEAEKDIGDCTNLDDLEKYKALLQEV 497
+ + W F +W+ E F KK + ++ KYK L+E+
Sbjct: 2092 QGKFDRSVEKWRRFHYDMKIFNQWLTEAEHFLKKTQIPENWEHA-------KYKWYLKEL 2144
Query: 498 ISHNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQV---EKNLSD 554
+T+ A E + + LQ +L Q + Q+ +K L +
Sbjct: 2145 QDGIGQRQTIVRVLNATGEEVIQQSSKTDASILQEKLGSLNLRWQEVCKQLAERKKRLEE 2204
Query: 555 Q----TEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMS 610
Q +EF E WL +A G++ LKE+L+ + ++AE +P Q +
Sbjct: 2205 QKNILSEFQRDLNEFVLWLEEADNITSVALEPGNEQQLKEKLEEIKLLAEELPLRQGTLK 2264
Query: 611 VLQDTFTKALDTTP--SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDD 668
L +T L + P ++QD + + W +++R L +++++I + ++
Sbjct: 2265 QLNETGGTVLVSAPISPEEQDKIENKLKQTNLQWIKVSRILPEKQGEIEAHIKDLGQFEE 2324
Query: 669 LYNRFNMWLSGVENKL---NEPS 688
N +WLS ++N+L N+P+
Sbjct: 2325 QLNHLLVWLSPIKNQLEIYNQPN 2347
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 86/402 (21%), Positives = 173/402 (43%), Gaps = 55/402 (13%)
Query: 384 ERLKNLEKEL----GRIG--HKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTL 437
E LKN++ L GRI HK K L+S + K + + + Q+ L
Sbjct: 2038 ESLKNIKDNLQQISGRIDIIHKK---KTAALQSATSMEKVKVQEAVAQMDFQGEKLHRMY 2094
Query: 438 QVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIGDCTNLDDLE--KYKALLQ 495
+ + + W F +W+ E E+ N ++ E KYK L+
Sbjct: 2095 KERQGRFDRSVEKWRHFHYDMKVFNQWLN------EVEQFFKKTQNPENWEHAKYKWYLK 2148
Query: 496 E----VISHNSDMETLNDKCEALMELAAHSPI---REETLRLQALYAALVTSVQGLVSQV 548
E + + + TLN E +++ ++ + + +E+ L + + + ++
Sbjct: 2149 ELQDGIGQRQAVVRTLNATGEEIIQQSSKTDVNILQEKLGSLSLRWHDICKELAERRKRI 2208
Query: 549 EKNLSDQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQHL 608
E+ + +EF E WL +A G + LKE+L+ V ++AE +P Q +
Sbjct: 2209 EEQKNVLSEFQRDLNEFVLWLEEADNIA--ITPLGDEQQLKEQLEQVKLLAEELPLRQGI 2266
Query: 609 MSVLQDTFTKALDTTP--SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNEL 666
+ L +T L + P ++QD L + + W +++R L +L+ ++ + +L
Sbjct: 2267 LKQLNETGGAVLVSAPIRPEEQDKLEKKLKQTNLQWIKVSRALPEKQGELEVHLKDFRQL 2326
Query: 667 DDLYNRFNMWLSGVENKL---NEPSPVFTEIDLNTKWQQYVNDELEWENHSQNTLQWLDN 723
++ + +WLS + N+L N+PS D+ E+E H +
Sbjct: 2327 EEQLDHLLLWLSPIRNQLEIYNQPSQA-GPFDIK---------EIEVTVHGK-------- 2368
Query: 724 IRSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQL-SEWDS 764
++D++ LL + +H+ K+K +P++++ + L SEW++
Sbjct: 2369 -QADVERLLSKGQHLY----KEKPSTQPVKRKLEDLRSEWEA 2405
Score = 34.7 bits (78), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 64/136 (47%), Gaps = 7/136 (5%)
Query: 1599 AMQDKISKLQSWLKQ----YIDYSGNKQA---LQSRLDKVNEIQESFPEISTKLQTLSDH 1651
++Q +S++ W+ Q Y++ + LQ+ ++++ +E + TK++ L++
Sbjct: 1163 SLQKDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRAKEEALQKETKVKLLTET 1222
Query: 1652 IENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLIT 1711
+ + P EA+ ++L L +++ + L+ + LE W+E + L K
Sbjct: 1223 VNSVIAHAPPSAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHELLSYLEKANK 1282
Query: 1712 WLNDTENVLKNFTLQP 1727
WLN+ E LK P
Sbjct: 1283 WLNEVELKLKTMENVP 1298
>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=4
Length = 8797
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 114/256 (44%), Gaps = 19/256 (7%)
Query: 1854 LEKYKALLQEVISHNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVS 1913
L KYK+L Q V+SH ++++ +K EAL+EL ++++ +LQ+ Y L + + V
Sbjct: 3856 LSKYKSLQQTVLSHEPSVKSVREKGEALLELVQDVTLKDKIDQLQSDYQDLCSIGKEHVF 3915
Query: 1914 QVEKNLSDQTEFLAKKEEVEAWLHKAHATVQECDELEA--------------GIKEEQKN 1959
+E + D ++ ++ +EVE WL + + D LE + EE
Sbjct: 3916 SLEAKVKDHEDYNSELQEVEKWLLQMSGRLVAPDLLETSSLETITQQLAHHKAMMEEIAG 3975
Query: 1960 IETQYLQWNSFRETLAQMTAWLDSVEKNIKQEIATPWTTTQELRSKLLKLKE-ILKKCEK 2018
E + +TL A D ++ +KQ + T++ S + + + + E
Sbjct: 3976 FEDRLNNLQMKGDTLIGQCA--DHLQAKLKQNVHAHLQGTKDSYSAICSTAQRMYQSLEH 4033
Query: 2019 GVGDHEAFVDKYEECSQKLAQVEAKYAKLIEPETSYEELQKRQGQLTALLTE-KVDMDVL 2077
+ H + D ++C L+ V+ +P S E K+ AL + + +D+L
Sbjct: 4034 ELQKHVSRQDTLQQCQAWLSAVQPDLEPSPQPPLSRAEAIKQVKHFRALQEQARTYLDLL 4093
Query: 2078 LNACVDLCDKVYESTS 2093
+ C DL + ++T+
Sbjct: 4094 CSMC-DLSNASVKTTA 4108
Score = 39.3 bits (90), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 52/228 (22%), Positives = 107/228 (46%), Gaps = 7/228 (3%)
Query: 913 GSPIKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGD 972
G P+ KI +L + + + ++ L LNQ H +E+ +E + +++ +V G
Sbjct: 5494 GKPLAKKIGKLTELHQQTIRQAENRLSKLNQAASHLEEYNEMLELILKWIEKAKVLAHGT 5553
Query: 973 VKTNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHMNLNDADRLT--VNDSVSSMQ 1030
+ N+ L+E + L EE+ E++ S + TE + + T ++ V+ +
Sbjct: 5554 IAWNSASQLREQYILHQTLLEESKEID---SELEAMTEKLQYLTSVYCTEKMSQQVAELG 5610
Query: 1031 KRYAQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLARPVSTQAEDISEAL 1090
+ +L + I+ R+ + + + +K+ + ++++ +A L++A++ L P + + E L
Sbjct: 5611 RETEELRQMIKIRLQNLQDAAKDMKKFEAELKKLQAALEQAQATLTSPEVGRL-SLKEQL 5669
Query: 1091 TVYQKLLDEINSWKNSQSDEDLVHLADSIKPLDEVVERIENHAVPKLK 1138
+ Q LL E+ S K L A I P D V HA +L+
Sbjct: 5670 SHRQHLLSEMESLKPKVQAVQLCQSALRI-PEDVVASLPLCHAALRLQ 5716
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 32 RYQLLHVMSKEVINRWQGLVYDHKLYNDVYVKTDDWLTGLEKDLDTLKNTTD----VEAK 87
+Y L ++KE ++R +V +H ++ + DW+T LD+ + T ++++
Sbjct: 3260 QYLALSNLTKEKVSRLDRIVAEHNQFSLGIKELQDWMTDAIHMLDSYCHPTSDKSVLDSR 3319
Query: 88 NSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALRD 136
L+ LL+ K + ++ + + GE + +T+ +G ++QQL++++D
Sbjct: 3320 TLKLEALLSVKQEKEIQMKMIVTRGESVLQNTSPEGIPTIQQQLQSVKD 3368
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 141/682 (20%), Positives = 275/682 (40%), Gaps = 118/682 (17%)
Query: 234 LKGKLSSWCGYEESVATLLDWLKVTEKKL------GDEMELKTTLDEKKAQLQVYRTIYQ 287
L+G L SW YE +V L W + EK+L GD+ ++ L + Q
Sbjct: 7017 LEGLLESWSEYENNVQCLKTWFETQEKRLKQQHRIGDQASVQNALKD-----------CQ 7065
Query: 288 DATSHQQDLLQLKDK-IESLHQPS----EQSKQQLATITTRHGNVLKRAQKFTEAYEGIV 342
D +DL++ K+K +E + Q + K+ +++I + L+ + + +V
Sbjct: 7066 DL----EDLIKAKEKEVEKIEQNGLALIQNKKEDVSSIVM---STLRELGQTWANLDHMV 7118
Query: 343 SIHQAYTKAVLDTQEWIDATYNAVN---MWGDLTLERVSLHSN--------LERLKNLEK 391
+ K+VLD ++ +N M +L R L + ++ L+NL+
Sbjct: 7119 GQLKILLKSVLDQWSSHKVAFDKINSYLMEARYSLSRFRLLTGSLEAVQVQVDNLQNLQD 7178
Query: 392 ELG---RIGHKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCL 448
+L R K ++ N +L+ P E + + ++ + W NL + + L
Sbjct: 7179 DLEKQERSLQKFGSITNQLLKECHPPVTETLTNTLKEVNMRWNNLLEEIAEQLQSSKALL 7238
Query: 449 SIWNDFLSSKNTLEKWIEGFQK---------KIEAEKDIGD------CTNLDDLEKYKAL 493
+W + K+ ++ Q+ K KDI D + +DL K
Sbjct: 7239 QLWQRY---KDYSKQCASTVQQQEDRTNELLKAATNKDIADDEVATWIQDCNDLLKGLGT 7295
Query: 494 LQEVISHNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQVEKNLS 553
+++ + + L ++ + ++ +A S I+ + L L AL ++ + ++ +
Sbjct: 7296 VKDSLFF---LHELGEQLKQQVDASAASAIQSDQLSLSQHLCALEQALCKQQTSLQAGVL 7352
Query: 554 DQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPE--GQHL--- 608
D F E +EAW+ +A +Q + S ++ + + ER+ E GQ L
Sbjct: 7353 DYETFAKSLEALEAWIVEAEEILQGQDPSHSSDL--------STIQERMEELKGQMLKFS 7404
Query: 609 -MSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELD 667
M+ D + P + ++ R M L W ++ ++L+S++ +
Sbjct: 7405 SMAPDLDRLNELGYRLPLNDKEIKR--MQNLNRHWSLISSQTTERFSKLQSFLLQHQTFL 7462
Query: 668 DLYNRFNMWLSGVENKLNEPSPVFTEIDLNTKW---QQYVNDELEWENHSQNTLQWLDNI 724
+ + +L E KL EI N + QQ ++ + E S+ Q L +I
Sbjct: 7463 EKCETWMEFLVQTEQKLA------VEISGNYQHLLEQQRAHELFQAEMFSRQ--QILHSI 7514
Query: 725 RSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQLSEWDSSIVPKVSDLETRWAAVKSAW 784
D + LLE+ + VDD +D+ K++ L +W V
Sbjct: 7515 IIDGQRLLEQGQ--VDD----RDEFNL-----------------KLTLLSNQWQGVIRRA 7551
Query: 785 DAKHSDLSSEIAQYSSYQNAVQDAEKWLLQISFQLMAH-NSLYINNRQQT--LEQIQHHE 841
+ + S+I Q+ Y+ + KWL+++S+ M+ S+ I +Q +++Q E
Sbjct: 7552 QQRRGIIDSQIRQWQRYREMAEKLRKWLVEVSYLPMSGLGSVPIPLQQARTLFDEVQFKE 7611
Query: 842 K-LLQDYSSYQNAVQDAEKWLL 862
K L+ SY V+ ++ LL
Sbjct: 7612 KVFLRQQGSYILTVEAGKQLLL 7633
Score = 38.1 bits (87), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 24/104 (23%), Positives = 57/104 (54%), Gaps = 4/104 (3%)
Query: 36 LHVMSKEVINRWQGLVYDHKLYNDVYVKTDDWLTGLEKDL----DTLKNTTDVEAKNSLL 91
+ ++KE + + + +V DH +Y D + DWL +++L D +++ + K S +
Sbjct: 2824 IMTVAKEKMRKVEEIVKDHLMYLDAVHEFTDWLHSAKEELHRWSDMSGDSSATQKKLSKI 2883
Query: 92 QKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALR 135
++L+ ++ +L+ + S ++ +T A G E++ +++ALR
Sbjct: 2884 KELIDSREIGASRLSRVESLAPEVKQNTTASGCELMHTEMQALR 2927
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 58/284 (20%), Positives = 121/284 (42%), Gaps = 19/284 (6%)
Query: 412 GPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKK 471
GP K+ + Q+ I L++TL+ K + W+ F S+ TL WI +K+
Sbjct: 1409 GPQNKQLLQQQAKSIKEQVKKLEDTLEEDIKTMEMVKTKWDHFGSNFETLSVWITEKEKE 1468
Query: 472 IEAEKDIGDCTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAA---HSPIREETL 528
+ A + ++ + + K +QE+ S S + L ++ ++ + + I+ +
Sbjct: 1469 LNALETSSSAMDMQ-ISQIKVTIQEIESKLSSIVGLEEEAQSFAQFVTTGESARIKAKLT 1527
Query: 529 RLQALYAALVTSVQGLVSQVEKNLSDQTEF---LAK-KEEVEAWLHKAHATVQECA-GNG 583
+++ L Q L + +LS Q +F L K ++ V + K ++ C+
Sbjct: 1528 QIRRYGEELREHAQCLEGTILGHLSQQQKFEENLRKIQQSVSEFEDKLAVPIKICSSATE 1587
Query: 584 SKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWD 643
+ VL+E +D + + + ++ + K ++ +DS + L+ ++
Sbjct: 1588 TYKVLQEHMD----LCQALESLSSAITAFSASARKVVN------RDSCVQEAAALQQQYE 1637
Query: 644 RLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEP 687
+ R K T L++ +A W L+ + F WL E K + P
Sbjct: 1638 DILRRAKERQTALENLLAHWQRLEKELSSFLTWLERGEAKASSP 1681
>sp|Q03001|DYST_HUMAN Dystonin OS=Homo sapiens GN=DST PE=1 SV=4
Length = 7570
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 134/646 (20%), Positives = 251/646 (38%), Gaps = 89/646 (13%)
Query: 220 KQLWDKLSSLTER------ELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLD 273
K +WD SL ER +L+G L + ++ ++ LL WL TE L ++ +
Sbjct: 6355 KLIWD---SLEERIINRQHKLEGALLALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPK 6411
Query: 274 EKKAQLQVYRTIYQDATSHQQDLLQLK----DKIES-LHQPSEQSKQQLATITTRHGNVL 328
+ +L + + D +HQ + + D IES + + + +L + R NVL
Sbjct: 6412 AIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNLQNKLEVLNQRWQNVL 6471
Query: 329 KRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYN---AVNMWGDL---TLERVSLHSN 382
++ ++ + +G + + + + D Q+W+ T A G L E++++H
Sbjct: 6472 EKTEQRKQQLDGALRQAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNVHME 6531
Query: 383 LERLKNLEKELGRIGHKTVALKNNVLESTGPIGKE-NINQEINQITLDWTNLQNTLQVID 441
+ ++E +K++ K + + P E NI+Q+IN + W +++ L
Sbjct: 6532 VCAAFEAKEET----YKSLMQKGQQMLARCPKSAETNIDQDINNLKEKWESVETKLNERK 6587
Query: 442 KHHAKCLSIWNDFLSSKNTLEKWIEGFQK--KIEAEKDIGDCTNLDDLEKYKALLQEVIS 499
+ L++ +F +S W+ ++ + + + T L ++++K EV S
Sbjct: 6588 TKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFANEVNS 6647
Query: 500 HNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFL 559
H + L+ L + + L L+ SVQ +V + L ++ L
Sbjct: 6648 HREQIIELDKTGTHLKYFSQKQDV--------VLIKNLLISVQSRWEKVVQRLVERGRSL 6699
Query: 560 AKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKA 619
+ H+A + + E K+ L L+ N P+ F K+
Sbjct: 6700 DDARKRAKQFHEAWSKLMEWLEESEKS-LDSELEIAN-----DPDKIKTQLAQHKEFQKS 6753
Query: 620 L-------DTTP------------SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYI 660
L DTT +D L + ++ LRD WD + +L+ +
Sbjct: 6754 LGAKHSVYDTTNRTGRSLKEKTSLADDNLKLDDMLSELRDKWDTICGKSVERQNKLEEAL 6813
Query: 661 ARWNELDDLYNRFNMWLSGVENKLNEPSPVFTEIDLNTKWQQYVNDELEWENHSQNTLQW 720
+ D WL VE +L E PV +IDL +
Sbjct: 6814 LFSGQFTDALQALIDWLYRVEPQLAEDQPVHGDIDL--------------------VMNL 6853
Query: 721 LDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQLSEWDSSIVP-KVSDLETRWAA 779
+DN ++ K L +R+ + LK +E + S DSS V ++ +L TRW
Sbjct: 6854 IDNHKAFQKELGKRTSSV--------QALKRSARELIEGSRDDSSWVKVQMQELSTRWET 6905
Query: 780 VKSAWDAKHSDLSSEIAQYSSYQNAVQDAEKWLLQISFQLMAHNSL 825
V + +K + L + + Q + + V +WL + L H L
Sbjct: 6906 VCALSISKQTRLEAALRQAEEFHSVVHALLEWLAEAEQTLRFHGVL 6951
Score = 37.0 bits (84), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 77/390 (19%), Positives = 155/390 (39%), Gaps = 26/390 (6%)
Query: 1355 YETLKKNIAEAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKA 1414
+++L K + IDK E Y+ +DW+ A + + + +T K +
Sbjct: 6248 WDSLNKAWKDRIDKLEEAMQAAVQYQDGLQAVFDWVDIAGGKLASMSPIGTDLETVKQQI 6307
Query: 1415 DKIKQITKSLPEGQ----KLIDKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNT 1470
+++KQ + Q +L + L V E + K + + ++ L W +L+
Sbjct: 6308 EELKQFKSEAYQQQIEMERLNHQAELLLKKVTEESD---KHTVQDPLMELKLIWDSLEER 6364
Query: 1471 LQDIDKHHA--KCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIG-DCTNLD-DLEKYKA 1526
+ I++ H L F + + L W+ + + +K +G D ++ +L K+
Sbjct: 6365 I--INRQHKLEGALLALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIELAKHHV 6422
Query: 1527 LLQEGLHKEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAE 1586
L + L ++ +++ NK + E + E +Q + L +L+ E
Sbjct: 6423 LQNDVLAHQS-----TVEAVNKAGNDLIESSAGEEASNLQNKLEVLNQRWQNVLEKTEQR 6477
Query: 1587 INKVANAAQERKAMQDKISKLQSWLKQYIDY-------SGNKQALQSRLDKVNEIQESFP 1639
++ A ++ K +I LQ WL + G + + +L+ E+ +F
Sbjct: 6478 KQQLDGALRQAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAFE 6537
Query: 1640 EISTKLQTLSDHIENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSLSDVKQGLESRLVQW 1699
++L + + P + +D+ NL+ +E + L++ K LE L
Sbjct: 6538 AKEETYKSLMQKGQQMLARCPKSAETNIDQDINNLKEKWESVETKLNERKTKLEEALNLA 6597
Query: 1700 NEYETSLGKLITWLNDTENVLKNFTLQPTL 1729
E+ SL I WL E L N +P+L
Sbjct: 6598 MEFHNSLQDFINWLTQAEQTL-NVASRPSL 6626
>sp|Q9QXZ0|MACF1_MOUSE Microtubule-actin cross-linking factor 1 OS=Mus musculus GN=Macf1
PE=1 SV=2
Length = 7354
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 96/489 (19%), Positives = 201/489 (41%), Gaps = 45/489 (9%)
Query: 403 LKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLE 462
L +++ + G K + + I+++ W NL T + + + + + +
Sbjct: 6023 LGADLIFACGETEKPEVKKSIDEMNNAWENLNKTWKERLEKLEDAMQAAVQYQDTLQAMF 6082
Query: 463 KWIEGFQKKIEAEKDIGDCTNL--DDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH 520
W++ K+ +G N D L + K EV +ME LN + E +++ A
Sbjct: 6083 DWLDNTVIKLCTMPPVGTDLNTVKDQLNEMKEFKVEVYQQQIEMEKLNHQGELMLKKATD 6142
Query: 521 SP----IREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWL-HKAHAT 575
IRE L+ L+ L + ++E L +F EE+ +WL H
Sbjct: 6143 ETDRDIIREPLTELKHLWENLGEKIAHRQHKLEGALLALGQFQHALEELMSWLTHTEELL 6202
Query: 576 VQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAM 635
+ +G V++ L +++ + Q ++ + ++ L+++ D SLR +
Sbjct: 6203 DAQRPISGDPKVIEVELAKHHVLKNDVLAHQATVATVNKAGSELLESSAGDDASSLRSRL 6262
Query: 636 TVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEPSPVFTEID 695
+ W+ + + + QL+S + + F + L+ +EN+L+ P
Sbjct: 6263 ETMNQCWESVLQKTEEREQQLQSTLQQAQGFHSEIEDFLLELNRMENQLSASKPTG---G 6319
Query: 696 LNTKWQQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKE 755
L ++ ++ +E HSQ L+ + I + LL++ + ++
Sbjct: 6320 LPETAREQLDTHMEL--HSQ--LRAKEEIYNQ---LLDKGRLML---------------- 6356
Query: 756 AQQLSEWDSSIVPK----VSDLETRWAAVKSAWDAKHSDLSSEIAQYSSYQNAVQDAEKW 811
LS DS K V+ LE +W AV S + + S L ++ + +QN++Q+ W
Sbjct: 6357 ---LSRGDSGSGSKTEQSVALLEQKWHAVSSKVEERKSKLEEALSLATEFQNSLQEFINW 6413
Query: 812 LL--QISFQLMAHNSLYINNRQQTLEQIQHHEKLLQDYSSYQNAVQDAEKWLLQISFQLM 869
L + S + + SL +N L QI+ H+ + + +++ + + ++ Q+ F
Sbjct: 6414 LTLAEQSLNIASPPSLILNT---VLSQIEEHKVFANEVNDHRDQIIELDQTGNQLKFLSQ 6470
Query: 870 AHNSLYINN 878
+ + I N
Sbjct: 6471 KQDVVLIKN 6479
Score = 37.4 bits (85), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 111/529 (20%), Positives = 210/529 (39%), Gaps = 98/529 (18%)
Query: 696 LNTKWQQYVNDELEWENHSQNTLQWLDNIRSD------MKTLLERSKHIVDDIEKKKDDL 749
L + Q+++ D E+EN Q + LD++ + +LL+R +D+ K DL
Sbjct: 3842 LRDELQKFLQDHKEFENWLQQSENELDSMHKGGSSPEALNSLLKRQGSFSEDVISHKGDL 3901
Query: 750 KPIQ-------------KEAQQLSEWDSSIVPKVSDLETRWAAVKSAWDAKHSDLSSEIA 796
+ + +E Q+ S + + K+ D R+ + S S LS +
Sbjct: 3902 RFVTISGQKVLETENNFEEGQEPSATRNLVNEKLKDATERYTTLHSKCIRLGSHLSMLLG 3961
Query: 797 QYSSYQNAVQDAEKWLLQISFQLMAHNSLYINNRQQTLEQIQHHEKLLQD-YSSYQNAVQ 855
QY +Q++ + W+L + KLL D +S +Q
Sbjct: 3962 QYQQFQSSADSLQAWVLTCEASV---------------------GKLLSDTVASDPGVLQ 4000
Query: 856 DAEKWLLQISFQLMAHNSLYINNRQQTLEQIQHHEKLLQDVILSPDNKLAPCFSAEEGSP 915
Q+ +L H Q +E++Q L D+ P A + P
Sbjct: 4001 QQLATTKQLQEELAEH--------QVPVEKLQKAAHDLLDIEGEP---------ALDCRP 4043
Query: 916 IKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGD-VK 974
I++ D + + S + + L + I + + +E++ ++E+E +E D V
Sbjct: 4044 IQETTDSISSRFQNLSCSLDERSALLQKAIAQSQSVQESMESLLQSIREVEQNLERDQVA 4103
Query: 975 TNNVLMLQELLNKYAQLNEE-AGELNMMISNVSIATEHMNLNDADRLTVNDSVSSMQKRY 1033
+ + ++QE L +L ++ A + + + + + T M D+ +S S +Q +
Sbjct: 4104 SLSSGVIQEALANNMKLKQDIARQKSSLEATHDMVTRFMETADS------NSASVLQGKL 4157
Query: 1034 AQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAE--SQLARPVSTQAEDISEALT 1091
A+LS+ + K ++K+ LL +AE QL+ + E+ S L
Sbjct: 4158 AELSQRFQQLQLQQQEKESNLKK----------LLPQAEMFEQLSNKLQQFMENKSRLLA 4207
Query: 1092 VYQKLLDEINSWKNSQSDEDLVHLADSIKPLDEVVE-RIEN-----HAVPKLKS--LLLL 1143
+Q D+D+ H + I+ L +E + EN H V L S L
Sbjct: 4208 ------------SGNQPDQDIAHFSQQIQELTLAMEDQKENLDTLEHLVTTLGSCGFALD 4255
Query: 1144 REQFTTLIMQIVGFITETTARVGEVDGNSATVQEKIDKYDKIIADIQEY 1192
Q I + TE V E + +++T QE++D++ K+I Q++
Sbjct: 4256 LSQHQDKIQNLKKDFTELQKTVQEREKDASTCQEQLDEFRKLIRTFQKW 4304
>sp|Q9TW65|DMD_CAEEL Dystrophin-1 OS=Caenorhabditis elegans GN=dys-1 PE=1 SV=2
Length = 3674
Score = 43.5 bits (101), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 69/374 (18%), Positives = 161/374 (43%), Gaps = 36/374 (9%)
Query: 518 AAHSPIREETLRLQALYAALVTSVQGLVSQVEK---------NLSDQTEFLAKKEEVEAW 568
AH +R QA A L+T ++ + EK +++ Q E A + E+E W
Sbjct: 2527 GAHDASPNRQVRQQA--AQLLTEMRRTIENCEKRCLILNQISDIARQNE--ASRNEMELW 2582
Query: 569 LHKAHATVQEC-AGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQ 627
L A + E S+ V+++ L + V E++ E + M+ + K +DT D+
Sbjct: 2583 LKSASDVIGERRVEELSEEVVRQELQVLERVVEQLTERKDKMAEINSQANKIVDTYTKDE 2642
Query: 628 QDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEP 687
+L ++ L SW + N +++ L++ + + + F WLS E+
Sbjct: 2643 AHNLSHLLSRLNMSWTKFNDNIRIRRAVLEASLRSRRDFHSALSEFEKWLSRQEDNC--- 2699
Query: 688 SPVFTEIDLNTKWQQYVNDELEWENHSQN--TLQWLDNIRSD-MKTLLERSKHIVDDIEK 744
+++ +T Q + D + +N +Q+ TL N D MK++ + K + + +E
Sbjct: 2700 ----SKLSADTSNHQAIKDTSKRKNWTQSFKTLNAELNAHEDVMKSVEKMGKMLAESLES 2755
Query: 745 KKDDLKPIQKEAQQLSEWDSSIVPKVSDLETRWAAVKSAWDAKHSDLSSEIAQYSSYQNA 804
+ ++ +++ + W +++ +++ R + W+ L+ ++ + + A
Sbjct: 2756 GNEKVELLKRVGETTRRW-TALRKTTNEIGERLEKAEQEWEKLSDGLADLLSWVEAKKQA 2814
Query: 805 VQDAEKWLLQISFQLMAHNSLYINNRQQTLEQIQHHEKLLQDYSSYQNAVQDAEKWLLQI 864
+ D + S + + ++ Q+ +E ++Y++ V++A +L+Q
Sbjct: 2815 IMDEQP--TGGSLSAVMQQASFVKGLQREIE---------SKTANYKSTVEEAHSFLMQH 2863
Query: 865 SFQLMAHNSLYINN 878
+ H+ +++
Sbjct: 2864 DLRPKLHSPHVLDD 2877
>sp|D3ZHV2|MACF1_RAT Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus
GN=Macf1 PE=1 SV=1
Length = 5430
Score = 40.8 bits (94), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 93/489 (19%), Positives = 198/489 (40%), Gaps = 45/489 (9%)
Query: 403 LKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLE 462
L +++ + G K + + I+++ W NL T + + + + + +
Sbjct: 4109 LGADLIFACGETEKPEVKKSIDEMNNAWENLNRTWKERLEKLEDAMQAAVQYQDTLQAMF 4168
Query: 463 KWIEGFQKKIEAEKDIGDCTNL--DDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH 520
W++ ++ +G N D L + K EV +ME LN + E +++ A
Sbjct: 4169 DWLDNTVIRLCTMPPVGTDLNTVKDQLNEMKEFKVEVYQQQIEMEKLNHQGELMLKKATD 4228
Query: 521 SP----IREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWL-HKAHAT 575
IRE L+ L+ L + ++E L +F EE+ WL H
Sbjct: 4229 ETDRDIIREPLTELKHLWENLGEKIAHRQHKLEGALLALGQFQHALEELMGWLTHTEELL 4288
Query: 576 VQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAM 635
+ +G V++ L +++ + Q + + + L+++ D SLR +
Sbjct: 4289 DAQRPISGDPKVIEVELAKHHVLKNDVLAHQATVETVNKAGNELLESSAGDDASSLRSRL 4348
Query: 636 TVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEPSPVFTEID 695
+ W+ + + + QL+S + + F + L+ +E++L+ P
Sbjct: 4349 ETMNQCWESVLQKTEEREQQLQSTLQQAQGFHSEIEEFLLELNRMESQLSASKPTG---G 4405
Query: 696 LNTKWQQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKE 755
L ++ ++ +E HSQ L+ + I + LL++ + ++
Sbjct: 4406 LPETAREQLDAHMEL--HSQ--LRAKEEIYNQ---LLDKGRLML---------------- 4442
Query: 756 AQQLSEWDSSIVPK----VSDLETRWAAVKSAWDAKHSDLSSEIAQYSSYQNAVQDAEKW 811
LS DS K V+ LE +W V S + + S L ++ + +QN++Q+ W
Sbjct: 4443 ---LSRGDSGSGSKTEQSVALLEQKWHVVSSKVEERKSKLEEALSLATEFQNSLQEFINW 4499
Query: 812 LL--QISFQLMAHNSLYINNRQQTLEQIQHHEKLLQDYSSYQNAVQDAEKWLLQISFQLM 869
L + S + + SL +N L QI+ H+ + +++++ + + ++ Q+ F
Sbjct: 4500 LTLAEQSLNIASPPSLILNT---VLSQIEEHKVFANEVNAHRDQIIELDQTGNQLKFLSQ 4556
Query: 870 AHNSLYINN 878
+ + I N
Sbjct: 4557 KQDVVLIKN 4565
>sp|Q62261|SPTB2_MOUSE Spectrin beta chain, non-erythrocytic 1 OS=Mus musculus GN=Sptbn1
PE=1 SV=2
Length = 2363
Score = 40.4 bits (93), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 383 LERLKNLEKEL-GRIGHKTVALKNNV-LESTGPIGKENINQEINQITLDWTNLQNTLQVI 440
L + + E E+ GR GH A+K + + G E I + I I W NL+ L I
Sbjct: 677 LSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIIYIREQWANLEQ-LSAI 735
Query: 441 DKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIG--DCTNLDDLEKYKALLQEVI 498
K + S+ + F + + ++ W+ K I + D+G + + ++K+K + +E+
Sbjct: 736 RKKRLEEASLLHQFQADADDIDAWMLDILK-IVSSNDVGHDEYSTQSLVKKHKDVAEEIT 794
Query: 499 SHNSDMETLNDKCEALMELAAHSP 522
++ ++TL+++ AL + A SP
Sbjct: 795 NYRPTIDTLHEQASALPQAHAESP 818
>sp|Q91ZU6|DYST_MOUSE Dystonin OS=Mus musculus GN=Dst PE=1 SV=1
Length = 7389
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 124/644 (19%), Positives = 255/644 (39%), Gaps = 85/644 (13%)
Query: 220 KQLWDKLSSLTER------ELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLD 273
K +WD SL ER +L+G L + ++ ++ LL WL T+ L ++ +
Sbjct: 6173 KLIWD---SLDERIVSRQHKLEGTLLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPK 6229
Query: 274 EKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQSKQ-----QLATITTRHGNVL 328
+ +L + + D +HQ + + L + SE + +L + R ++L
Sbjct: 6230 AIEIELAKHHVLQNDVLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDIL 6289
Query: 329 KRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYN---AVNMWGDL---TLERVSLHSN 382
++ + + + + + + + D Q+W+ T A G L E+++ H
Sbjct: 6290 EKTDQRKQQLDSALRQAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHME 6349
Query: 383 LERLKNLEKELGRIGHKTVALKNNVLESTGPIGKE-NINQEINQITLDWTNLQNTLQVID 441
+ +++E +K++ L+ + + P E NI+Q+I + W ++++ L
Sbjct: 6350 VCTAFAIKEET----YKSLMLRGQQMLARCPRSAETNIDQDITNLKEKWESVKSKLNEKK 6405
Query: 442 KHHAKCLSIWNDFLSSKNTLEKWIEGFQK--KIEAEKDIGDCTNLDDLEKYKALLQEVIS 499
+ L + +F +S W+ ++ + + + T L ++++K EV S
Sbjct: 6406 TKLEEALHLAMNFHNSLQDFINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNS 6465
Query: 500 HNSDMETLNDKCEALMELAAHSPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFL 559
H + L+ L + + L L+ SVQ +V + L ++ L
Sbjct: 6466 HREQIIELDKTGTHLKYFSQKQDV--------VLIKNLLISVQSRWEKVVQRLVERGRSL 6517
Query: 560 AKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVN----MVAERIPE--------GQH 607
+ + H+A + + E K+ L L+ N + A+ + G+H
Sbjct: 6518 DEARKRAKQFHEAWSKLMEWLEESEKS-LDSELEIANDPDKIKAQLVQHKEFQKSLGGKH 6576
Query: 608 LMSVLQDTFTKALDTTPSDQQDSLR--EAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNE 665
+ + ++L S D+L+ ++ LRD WD + +L+ + +
Sbjct: 6577 SVYDTTNRTGRSLKEKTSLADDNLKLDNMLSELRDKWDTICGKSVERQNKLEEALLFSGQ 6636
Query: 666 LDDLYNRFNMWLSGVENKLNEPSPVFTEIDLNTKWQQYVNDELEWENHSQNTLQWLDNIR 725
D WL VE +L E PV +IDL
Sbjct: 6637 FTDALQALIDWLYRVEPQLAEDQPVHGDIDL----------------------------- 6667
Query: 726 SDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQLSEW---DSSIVP-KVSDLETRWAAVK 781
+ +L++ K ++ K+ ++ +++ A++L E DSS V ++ +L TRW V
Sbjct: 6668 --VMSLIDNHKVFQKELGKRTSSVQALKRSARELIEGSRDDSSWVRVQMQELSTRWETVC 6725
Query: 782 SAWDAKHSDLSSEIAQYSSYQNAVQDAEKWLLQISFQLMAHNSL 825
+ +K + L S + Q + + V +WL + L H +L
Sbjct: 6726 ALSISKQTRLESALQQAEEFHSVVHTLLEWLAEAEQTLRFHGAL 6769
>sp|Q01082|SPTB2_HUMAN Spectrin beta chain, non-erythrocytic 1 OS=Homo sapiens GN=SPTBN1
PE=1 SV=2
Length = 2364
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 71/144 (49%), Gaps = 6/144 (4%)
Query: 383 LERLKNLEKEL-GRIGHKTVALKNNV-LESTGPIGKENINQEINQITLDWTNLQNTLQVI 440
L + + E E+ GR GH A+K + + G E I + I I W NL+ L I
Sbjct: 677 LSKHRAFEDEMSGRSGHFEQAIKEGEDMIAEEHFGSEKIRERIIYIREQWANLEQ-LSAI 735
Query: 441 DKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIG--DCTNLDDLEKYKALLQEVI 498
K + S+ + F + + ++ W+ K I + D+G + + ++K+K + +E+
Sbjct: 736 RKKRLEEASLLHQFQADADDIDAWMLDILK-IVSSSDVGHDEYSTQSLVKKHKDVAEEIA 794
Query: 499 SHNSDMETLNDKCEALMELAAHSP 522
++ ++TL+++ AL + A SP
Sbjct: 795 NYRPTLDTLHEQASALPQEHAESP 818
>sp|Q8WXH0|SYNE2_HUMAN Nesprin-2 OS=Homo sapiens GN=SYNE2 PE=1 SV=3
Length = 6885
Score = 39.7 bits (91), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 29/213 (13%)
Query: 255 LKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQSK 314
LK+ +K L +L + L E K+Q ++ + ++ L++K ESL Q + S
Sbjct: 2182 LKIYKKFLKKAQDLTSLLKELKSQGNYLLECTKNPSFSEEPWLEIKHLHESLLQQLQDSV 2241
Query: 315 QQLATITTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTL 374
Q L +G V H +Y V D +D + D +
Sbjct: 2242 QNL---------------------DGHVREHDSYQVCVTDLNTTLDNFSKEFVSFSDKPV 2280
Query: 375 ERVSLHSNLERLKNLEKEL----GRIGHKTVALKNNVLESTGPIGKENINQEINQITLDW 430
+++++ L++L+ LE L G + K +AL +V ++T +G++ I +I +
Sbjct: 2281 DQIAVEEKLQKLQELENRLSLQDGTLK-KILALAKSVKQNTSSVGQKIIKDDIKSLQCKQ 2339
Query: 431 TNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEK 463
+L+N L + CL N L SK + EK
Sbjct: 2340 KDLENRLASAKQEMECCL---NSILKSKRSTEK 2369
Score = 34.7 bits (78), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 30/143 (20%), Positives = 65/143 (45%), Gaps = 3/143 (2%)
Query: 1355 YETLKKNIAEAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKA 1414
+E+L + + +++ + EH++Y+ + L + +D +Q ++K
Sbjct: 2230 HESLLQQLQDSVQNLDGHVREHDSYQVCVTDLNTTLDNFSKEFVSFSDKPVDQIAVEEKL 2289
Query: 1415 DKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQDI 1474
K++++ L + K +AL +V ++T +G++ I +I + +L+N L
Sbjct: 2290 QKLQELENRLSLQDGTLKKILALAKSVKQNTSSVGQKIIKDDIKSLQCKQKDLENRLASA 2349
Query: 1475 DKHHAKCLSLWNDFLSSKNTLEK 1497
+ CL N L SK + EK
Sbjct: 2350 KQEMECCL---NSILKSKRSTEK 2369
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
Length = 3660
Score = 39.3 bits (90), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 69/356 (19%), Positives = 142/356 (39%), Gaps = 22/356 (6%)
Query: 1379 YKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALK 1438
YK W+++++ E + + + ++K + SL E QK +
Sbjct: 946 YKDTVTTILSWIQQSETKVSIPPVAVAEYEIMEQRLGELKALQSSLQEQQK----GLKYL 1001
Query: 1439 NNVLESTGPIGKENINQ----EINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNT 1494
N +E ++Q E+ I W L + L + + ++ F + T
Sbjct: 1002 NTTVEDLSRKAPAEVSQKYRSEVELIVGRWKKLSSQLVEHCQKLEDLMTKLQRFQNDTKT 1061
Query: 1495 LEKWIEGFQKKIESE-KDIGDCTNLD-DLEKYKALLQEGLHKEADNKKVLIDSFNKGIIG 1552
L+KW+ ++ E +GD L+ LE+ AL+ + + ++S N+
Sbjct: 1062 LKKWMAEVDVFLKEEWPALGDSEALEKQLEQCTALV-----NDIQTIQPSLNSVNEIGKK 1116
Query: 1553 MTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWLK 1612
M E I + L + + Q A+ + + +++ +S++ W+
Sbjct: 1117 MKREAEPEFASRIATELKDLNAQWEHICQQAHAKKAALKGGLDKTVSLRKDLSEMHEWIT 1176
Query: 1613 Q----YIDYS---GNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTNE 1665
Q Y++ + LQ ++++ +E + K++ ++D + N K P NE
Sbjct: 1177 QAEEEYLERDFEYKTPEELQKAVEELKRAKEDAMQKEVKVKLITDSVNNFIAKAPPAANE 1236
Query: 1666 AMYRDLANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLITWLNDTENVLK 1721
A+ ++L L +++ S L+ + LE W+E + L WLN+ E LK
Sbjct: 1237 ALKKELDVLITSYQRLCSRLNGKCKTLEEVWACWHELLSYLDAENKWLNEVELKLK 1292
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 38.5 bits (88), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 104/527 (19%), Positives = 214/527 (40%), Gaps = 94/527 (17%)
Query: 696 LNTKWQQYVNDELEWENHSQNTLQWLDNIRSD------MKTLLERSKHIVDDIEKKKDDL 749
L + Q+++ D E+E+ + + + L+N+ + +LL+R +D+ K DL
Sbjct: 3880 LQDELQKFLQDHKEFESWLERSEKELENMHKGGSSPETLPSLLKRQGSFSEDVISHKGDL 3939
Query: 750 KPIQ-------------KEAQQLSEWDSSIVPKVSDLETRWAAVKSAWDAKHSDLSSEIA 796
+ + KE ++ SE + + K+ D R+ A+ S S L+ +
Sbjct: 3940 RFVTISGQKVLDMENSFKEGKEPSEIGNLVKDKLKDATERYTALHSKCTRLGSHLNMLLG 3999
Query: 797 QYSSYQNAVQDAEKWLLQISFQLMAHNSLYINNRQQTL-EQIQHHEKLLQDYSSYQNAVQ 855
QY +QN+ + W+ + S + + L EQ+ ++L ++ + +Q V+
Sbjct: 4000 QYHQFQNSADSLQAWMQACEANVEKLLSDTVASDPGVLQEQLATTKQLQEELAEHQVPVE 4059
Query: 856 DAEKWLLQISFQLMAHNSLYINNRQQTLEQIQHHEKLLQDVILSPDNKLAPCFSAEEGSP 915
+K +A + + I H + D ILS L+ AE S
Sbjct: 4060 KLQK---------VARDIMEIEGEPAP---DHRHVQETTDSILSHFQSLSYSL-AERSSL 4106
Query: 916 IKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAK-LKELEVAVEGDVK 974
++ I AQS +Q++L++L Q IG EV+ +N+E K + L V +
Sbjct: 4107 LQKAI--------AQSQSVQESLESLLQSIG-----EVE-QNLEGKQVSSLSSGVIQEAL 4152
Query: 975 TNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHMNLNDADRLTV-NDSVSSMQKRY 1033
N+ + Q++ + + L + + T M D+ V ++ + +R+
Sbjct: 4153 ATNMKLKQDIARQKSSLE----------ATREMVTRFMETADSTTAAVLQGKLAEVSQRF 4202
Query: 1034 AQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLARPVSTQAEDISEALTVY 1093
QL +++ S++ L + +H + + ++ LA
Sbjct: 4203 EQLCLQQQEKESSLKKLLPQAEMFEHLSGKLQQFMENKSRMLA----------------- 4245
Query: 1094 QKLLDEINSWKNSQSDEDLVHLADSIKPLD-EVVERIEN-----HAVPKLKSLLLLRE-- 1145
+Q D+D+ H I+ L+ E+ ++ EN H V +L S +
Sbjct: 4246 ----------SGNQPDQDITHFFQQIQELNLEMEDQQENLDTLEHLVTELSSCGFALDLC 4295
Query: 1146 QFTTLIMQIVGFITETTARVGEVDGNSATVQEKIDKYDKIIADIQEY 1192
Q + + TE V E + ++++ QE++D++ K++ Q++
Sbjct: 4296 QHQDRVQNLRKDFTELQKTVKEREKDASSCQEQLDEFRKLVRTFQKW 4342
>sp|Q9JI55|PLEC_CRIGR Plectin (Fragment) OS=Cricetulus griseus GN=PLEC PE=1 SV=1
Length = 4473
Score = 36.2 bits (82), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 8/109 (7%)
Query: 1931 EVEAWLHKAHATVQECDELEAGIKEEQKNIETQYLQWNSFRETLAQMTAWLDSVEKNIKQ 1990
EVE W + + ++ + A I Q+ +E Q +RE+ +++WL ++ +Q
Sbjct: 1099 EVERWRERVNQLLERWQAVLAQIDVRQRELEQLGRQLRYYRESADPLSSWLQDAKRRQEQ 1158
Query: 1991 EIATPWTTTQELRSKLLKLKEILKKCEKGVGDHEAFVDKYEECSQKLAQ 2039
A P +Q R +L + K +L++ E+ +K EEC QK A+
Sbjct: 1159 IQAVPIPNSQAAREQLRQEKALLEEIER-------HGEKVEEC-QKFAK 1199
>sp|Q8CP76|EBH_STAES Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 12228) GN=ebh PE=4 SV=1
Length = 9439
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 1025 SVSSMQKRYAQLS------RTIEDRI--------STVNNKLQSVKRLQHKVEEAKALLQK 1070
S+++ +RY Q S +T DRI + VNN L V+ +Q K+ EA+ALLQ
Sbjct: 2849 SITAYNQRYQQFSNELNSTKTNTDRILKEQNPSVADVNNALNKVREVQQKLNEARALLQN 2908
Query: 1071 AESQLA 1076
E A
Sbjct: 2909 KEDNSA 2914
>sp|Q5HPA2|EBH_STAEQ Extracellular matrix-binding protein ebh OS=Staphylococcus
epidermidis (strain ATCC 35984 / RP62A) GN=ebh PE=4 SV=2
Length = 9439
Score = 36.2 bits (82), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 14/66 (21%)
Query: 1025 SVSSMQKRYAQLS------RTIEDRI--------STVNNKLQSVKRLQHKVEEAKALLQK 1070
S+++ +RY Q S +T DRI + VNN L V+ +Q K+ EA+ALLQ
Sbjct: 2849 SITAYNQRYQQFSNELNSTKTNTDRILKEQNPSVADVNNALNKVREVQQKLNEARALLQN 2908
Query: 1071 AESQLA 1076
E A
Sbjct: 2909 KEDNSA 2914
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3
Length = 3685
Score = 35.8 bits (81), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 83/186 (44%), Gaps = 7/186 (3%)
Query: 1543 IDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQD 1602
++S N+G + E ++ + L + + + Q + A + ++ ++Q
Sbjct: 1105 LNSVNEGGQKIKNEAEPEFASRLETELKELNTQWDHMCQQVYARKEALKGGLEKTVSLQK 1164
Query: 1603 KISKLQSWLKQ----YIDYSGNKQA---LQSRLDKVNEIQESFPEISTKLQTLSDHIENS 1655
+S++ W+ Q Y++ + LQ ++++ +E + K++ L++ + +
Sbjct: 1165 DLSEMHEWMTQAEEEYLERDFEYKTPDELQKAVEEMKRAKEEAQQKEAKVKLLTESVNSV 1224
Query: 1656 SRKLPSRTNEAMYRDLANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLITWLND 1715
+ P EA+ ++L L +++ + L+ + LE W+E + L K WLN+
Sbjct: 1225 IAQAPPVAQEALKKELETLTTNYQWLCTRLNGKCKTLEEVWACWHELLSYLEKANKWLNE 1284
Query: 1716 TENVLK 1721
E LK
Sbjct: 1285 VEFKLK 1290
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.127 0.349
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 744,007,801
Number of Sequences: 539616
Number of extensions: 31041603
Number of successful extensions: 143455
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 84
Number of HSP's successfully gapped in prelim test: 2673
Number of HSP's that attempted gapping in prelim test: 121703
Number of HSP's gapped (non-prelim): 14350
length of query: 2174
length of database: 191,569,459
effective HSP length: 133
effective length of query: 2041
effective length of database: 119,800,531
effective search space: 244512883771
effective search space used: 244512883771
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 70 (31.6 bits)