Query psy4474
Match_columns 2174
No_of_seqs 408 out of 1754
Neff 10.1
Searched_HMMs 29240
Date Fri Aug 16 18:02:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4474.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4474hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1hci_A Alpha-actinin 2; triple 100.0 2.5E-26 8.7E-31 297.6 46.1 424 52-551 11-471 (476)
2 3edv_A Spectrin beta chain, br 100.0 5.9E-26 2E-30 277.5 38.7 307 1375-1693 7-322 (323)
3 3edv_A Spectrin beta chain, br 99.9 3.9E-25 1.3E-29 270.2 39.1 301 244-549 11-322 (323)
4 1u4q_A Spectrin alpha chain, b 99.9 2.1E-25 7E-30 273.1 36.6 311 1375-1696 4-321 (322)
5 1hci_A Alpha-actinin 2; triple 99.9 7.5E-25 2.6E-29 283.8 40.5 420 340-796 8-473 (476)
6 1u4q_A Spectrin alpha chain, b 99.9 2.5E-24 8.6E-29 263.4 38.8 313 344-660 4-321 (322)
7 3kbt_A Beta-I spectrin, spectr 99.9 6.9E-25 2.4E-29 268.6 31.2 313 1375-1696 5-323 (326)
8 3kbt_A Beta-I spectrin, spectr 99.9 4E-24 1.4E-28 261.9 34.4 305 243-552 8-323 (326)
9 1sjj_A Actinin; 3-helix bundle 99.9 1.4E-20 4.7E-25 262.0 39.6 303 243-546 374-705 (863)
10 3r6n_A Desmoplakin; spectrin r 99.9 1.3E-19 4.5E-24 220.7 42.4 318 350-685 9-395 (450)
11 3r6n_A Desmoplakin; spectrin r 99.9 1.4E-19 4.9E-24 220.4 41.6 313 1381-1720 9-394 (450)
12 1sjj_A Actinin; 3-helix bundle 99.9 2.2E-20 7.4E-25 260.0 38.2 409 241-656 252-707 (863)
13 3edu_A Beta-I spectrin, spectr 99.8 9.3E-19 3.2E-23 198.6 21.3 212 1377-1596 4-216 (218)
14 1s35_A Beta-I spectrin, spectr 99.8 1.9E-18 6.5E-23 196.4 23.0 210 1377-1594 3-213 (214)
15 1u5p_A Spectrin alpha chain, b 99.8 3.2E-18 1.1E-22 194.8 22.3 211 1375-1594 4-215 (216)
16 1cun_A Protein (alpha spectrin 99.8 9E-18 3.1E-22 191.0 25.2 210 1376-1594 2-212 (213)
17 1u5p_A Spectrin alpha chain, b 99.8 8.5E-18 2.9E-22 191.4 23.4 206 53-342 4-215 (216)
18 1cun_A Protein (alpha spectrin 99.8 2.4E-17 8.2E-22 187.5 24.5 203 56-342 4-212 (213)
19 3edu_A Beta-I spectrin, spectr 99.8 1.6E-17 5.5E-22 188.4 19.8 204 243-450 5-216 (218)
20 1s35_A Beta-I spectrin, spectr 99.7 5.9E-17 2E-21 184.1 23.0 207 452-660 3-213 (214)
21 3fb2_A Spectrin alpha chain, b 99.7 1.2E-16 4E-21 181.3 21.7 205 1374-1587 13-218 (218)
22 1quu_A Human skeletal muscle a 99.7 1.3E-16 4.5E-21 185.1 22.5 226 1364-1595 7-243 (250)
23 1quu_A Human skeletal muscle a 99.7 3.4E-16 1.2E-20 181.6 24.7 207 243-450 18-244 (250)
24 3pdy_A Plectin; cytoskeleton, 99.7 9.4E-16 3.2E-20 171.2 21.4 196 244-445 10-208 (210)
25 3fb2_A Spectrin alpha chain, b 99.7 1.4E-15 4.7E-20 172.5 20.2 201 451-653 15-218 (218)
26 2iak_A Bullous pemphigoid anti 99.7 5.1E-16 1.7E-20 176.1 15.0 195 57-339 25-223 (224)
27 3pdy_A Plectin; cytoskeleton, 99.7 4.6E-15 1.6E-19 165.6 22.3 199 1379-1592 10-209 (210)
28 2iak_A Bullous pemphigoid anti 99.6 1.7E-15 5.7E-20 171.8 16.2 198 242-445 23-223 (224)
29 3pe0_A Plectin; cytoskeleton, 99.6 5.8E-15 2E-19 170.7 16.9 180 44-311 1-188 (283)
30 3lbx_B Beta-I spectrin, spectr 99.5 1.9E-13 6.6E-18 149.5 19.0 160 1597-1805 6-171 (185)
31 3lbx_B Beta-I spectrin, spectr 99.5 2.7E-13 9.2E-18 148.4 18.5 167 1374-1548 4-171 (185)
32 3lbx_A Spectrin alpha chain, e 99.5 2.6E-13 8.8E-18 143.2 15.0 138 911-1050 22-160 (161)
33 3lbx_A Spectrin alpha chain, e 99.5 7.1E-13 2.4E-17 139.8 16.0 136 1342-1481 25-160 (161)
34 3pe0_A Plectin; cytoskeleton, 99.5 9.1E-13 3.1E-17 152.4 18.2 185 940-1211 3-188 (283)
35 3f31_A Spectrin alpha chain, b 99.4 2.4E-12 8.2E-17 134.3 14.8 136 911-1048 12-148 (149)
36 3f31_A Spectrin alpha chain, b 99.4 4.1E-12 1.4E-16 132.5 15.4 134 1342-1479 15-148 (149)
37 3uun_A Dystrophin; triple heli 99.3 2.4E-11 8.3E-16 122.8 14.0 114 1375-1488 3-118 (119)
38 3uul_A Utrophin; spectrin repe 99.3 3.7E-11 1.3E-15 121.1 15.2 111 1376-1486 4-116 (118)
39 3uul_A Utrophin; spectrin repe 99.1 3.2E-10 1.1E-14 114.1 13.7 104 243-346 6-116 (118)
40 3uun_A Dystrophin; triple heli 99.1 3.3E-10 1.1E-14 114.4 12.6 106 243-348 6-118 (119)
41 2spc_A Spectrin; cytoskeleton; 99.0 1E-09 3.4E-14 107.6 8.2 102 947-1048 4-106 (107)
42 2odv_A Plectin 1, HD1; plakin 98.9 5.4E-08 1.8E-12 107.4 18.6 198 1375-1588 12-225 (235)
43 1g8x_A Myosin II heavy chain f 98.8 1.2E-08 4.2E-13 137.5 14.6 228 1365-1600 758-1000(1010)
44 2odv_A Plectin 1, HD1; plakin 98.8 1.7E-07 6E-12 103.3 20.1 195 343-545 11-224 (235)
45 1g8x_A Myosin II heavy chain f 98.8 2.3E-08 8E-13 134.8 15.7 210 244-455 771-1001(1010)
46 2spc_A Spectrin; cytoskeleton; 98.8 1E-08 3.6E-13 100.3 9.0 103 1375-1479 4-106 (107)
47 2ycu_A Non muscle myosin 2C, a 98.5 3E-08 1E-12 134.1 3.2 239 28-348 739-992 (995)
48 2ycu_A Non muscle myosin 2C, a 98.5 8.8E-08 3E-12 129.6 6.2 138 918-1055 843-990 (995)
49 1wlx_A Alpha-actinin 4; three- 97.6 0.0011 3.7E-08 63.8 13.6 106 942-1049 8-123 (129)
50 1wlx_A Alpha-actinin 4; three- 97.3 0.0023 7.9E-08 61.5 12.1 111 548-660 7-125 (129)
51 1c1g_A Tropomyosin; contractIl 89.1 35 0.0012 38.8 35.8 16 490-505 8-23 (284)
52 1c1g_A Tropomyosin; contractIl 86.3 50 0.0017 37.5 38.8 43 630-672 3-45 (284)
53 1i84_S Smooth muscle myosin he 78.7 4.1 0.00014 57.4 10.1 16 1377-1392 660-675 (1184)
54 3na7_A HP0958; flagellar bioge 77.0 99 0.0034 34.6 19.4 22 2025-2046 64-85 (256)
55 3ghg_A Fibrinogen alpha chain; 76.5 77 0.0026 38.0 17.7 72 1218-1292 115-186 (562)
56 1i84_S Smooth muscle myosin he 74.9 4.9 0.00017 56.7 9.2 16 374-389 695-710 (1184)
57 3vkg_A Dynein heavy chain, cyt 46.3 8.5E+02 0.029 37.8 23.9 19 175-193 271-289 (3245)
58 2lw1_A ABC transporter ATP-bin 46.0 98 0.0034 27.9 9.0 59 244-302 27-85 (89)
59 3na7_A HP0958; flagellar bioge 34.9 5.1E+02 0.017 28.7 22.4 84 917-1003 31-114 (256)
60 2avr_X Adhesion A; antiparalle 32.4 3.3E+02 0.011 25.8 13.6 85 1018-1102 3-89 (119)
61 3fx7_A Putative uncharacterize 29.8 1.1E+02 0.0036 27.8 6.1 56 1666-1722 24-84 (94)
62 3fx7_A Putative uncharacterize 29.4 1.5E+02 0.005 26.9 6.9 58 1450-1508 22-84 (94)
63 1deq_A Fibrinogen (alpha chain 28.4 7.2E+02 0.025 28.7 14.0 142 625-775 49-190 (390)
64 3ghg_A Fibrinogen alpha chain; 27.9 8.8E+02 0.03 29.3 16.5 21 1924-1944 75-95 (562)
65 3tnu_A Keratin, type I cytoske 24.9 4.9E+02 0.017 25.3 11.7 23 2057-2079 100-122 (131)
66 3tnu_B Keratin, type II cytosk 24.9 4.8E+02 0.017 25.3 12.8 25 2056-2080 97-121 (129)
67 1i4d_A Arfaptin 2, partner of 24.5 6.8E+02 0.023 26.9 15.9 156 26-200 16-171 (224)
68 3etw_A Adhesin A; antiparallel 22.4 5.1E+02 0.017 24.7 13.6 85 1018-1102 3-89 (119)
69 2fic_A Bridging integrator 1; 21.4 8.2E+02 0.028 26.7 20.2 71 270-340 141-211 (251)
70 2ke4_A CDC42-interacting prote 20.1 2.8E+02 0.0097 25.5 7.2 72 2058-2140 18-89 (98)
No 1
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.96 E-value=2.5e-26 Score=297.56 Aligned_cols=424 Identities=13% Similarity=0.186 Sum_probs=336.3
Q ss_pred HhhhhhHHHHHhHHHHHHhHHHhhhhhcCCchhhhhHHHHHHHHHhhhhhh-hhhh-------hhhcccccccccccccc
Q psy4474 52 YDHKLYNDVYVKTDDWLTGLEKDLDTLKNTTDVEAKNSLLQKLLTEKDQAG-HKLT-------YLTSSGEKLYLDTAAKG 123 (2174)
Q Consensus 52 ~~~q~f~~~~~e~~~Wl~e~e~~l~~~~~~~~l~~~~~~~~~l~~e~~~~~-~~l~-------~l~~~g~~l~~~~~~~~ 123 (2174)
.....|...+.++..||.+++..+.+...|.++.....++.+|...+.... +++. .+...|.+|.....+.-
T Consensus 11 ~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~~l~~~~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~l~~~~~~~~ 90 (476)
T 1hci_A 11 RLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNRPAF 90 (476)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHTTCCCCCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 345778999999999999999999998888888888888888877666554 4443 34444555433322111
Q ss_pred chHHHHHHHHHhhhhhhhhhhHHHhhhhhHHHHHHHhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 124 REVVRQQLRALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQINKDQALEKAIVSVNKRYEDLVDGILKTISQLEESLD 203 (2174)
Q Consensus 124 ~~~i~~~l~~l~~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~ 203 (2174)
.+.+...+. +...+-..+..+...|..+...+..|..+|+.+
T Consensus 91 ~~~~~~~~~------------------------------------~i~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~-- 132 (476)
T 1hci_A 91 MPSEGKMVS------------------------------------DIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHL-- 132 (476)
T ss_dssp CCCGGGCSS------------------------------------SHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH--
T ss_pred CCCCCCCHH------------------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
Confidence 011111111 112222345555555666666666677777665
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHH
Q psy4474 204 IFQQFQQLQKAYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYR 283 (2174)
Q Consensus 204 ~~q~~~~~~k~~~~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~ 283 (2174)
.. .|...++.+..||.+++..+.+.++.|.|++.++.++++|+
T Consensus 133 ~~-------------------------------------~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl~~v~~ll~kh~ 175 (476)
T 1hci_A 133 AE-------------------------------------KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHE 175 (476)
T ss_dssp HH-------------------------------------HHHHHHHHHHHHHTTHHHHHHCCGGGSCCHHHHHHHHHHHH
T ss_pred HH-------------------------------------HHHHHHHHHHHHHHHHHHHhhcCCccCCCHHHHHHHHHHHH
Confidence 33 49999999999999999999875555999999999999999
Q ss_pred HHHHHHHHhHHhHHHHHHHHHHhcCCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHH
Q psy4474 284 TIYQDATSHQQDLLQLKDKIESLHQPSEQS----KQQLATITTRHGNVLKRAQKFTEAYEGIVSIHQ-------AYTKAV 352 (2174)
Q Consensus 284 ~l~~el~~~~~~v~~l~~~~~~L~~~~~~~----~~~~~~l~~r~~~L~~~~~~r~~~Le~~~~~~~-------~f~~~~ 352 (2174)
.|+.+|.++.+.|..|...|..|+..+++. ..++..|+.+|..|+..+..|..+|+.++..++ .|...+
T Consensus 176 ~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~~e~l~~~f~~~a 255 (476)
T 1hci_A 176 AFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRA 255 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999998876543 567999999999999999999999999988776 899999
Q ss_pred HHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhhhHHHH---h---hhhhhccCc---cccccHHHHH
Q psy4474 353 LDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGHKTVAL---K---NNVLESTGP---IGKENINQEI 423 (2174)
Q Consensus 353 ~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~~~l---~---~~~l~~~~~---~~~~~i~~~~ 423 (2174)
.++..||.++...+.+.. ++.|+.+++.++++|+.|..++......+..+ . ..++...++ .+.+.|...+
T Consensus 256 ~~~~~Wl~~~~~~l~~~~-~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~i~~~~ 334 (476)
T 1hci_A 256 APFNNWMEGAMEDLQDMF-IVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTM 334 (476)
T ss_dssp HHHHHHHHHHHHHTTCCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSCSCCTTCSSCH
T ss_pred HHHHHHHHHHHHHHhccc-ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCCCCcchhccH
Confidence 999999999999998864 68899999999999999999999887665544 2 233333333 2567788999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhhhhccccCCCCcHHHHHHHHHHHHH
Q psy4474 424 NQITLDWTNLQNTLQVIDKHHAKCLSI-------WNDFLSSKNTLEKWIEGFQKKIEAEKDIGDCTNLDDLEKYKALLQE 496 (2174)
Q Consensus 424 ~~l~~~w~~L~~~~~~r~~~Le~~~~~-------~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~~~~l~~~k~l~~e 496 (2174)
..|..+|+.|...+..|...|+.++.. ++.|...++.+..||.+++..+.+.+.+....+..++.+|+.|..+
T Consensus 335 ~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~~~~le~~l~~~~~~~~e 414 (476)
T 1hci_A 335 DELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGALEDQMNQLKQYEHN 414 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTTSTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999874 3689999999999999999999875454455678899999999999
Q ss_pred HHhhhhhHHHHHHHHHHHHHhcc--CCcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 497 VISHNSDMETLNDKCEALMELAA--HSPIREETLRLQALYAALVTSVQGLVSQVEKN 551 (2174)
Q Consensus 497 i~~~~~~l~~l~~~~~~L~~~~~--~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~ 551 (2174)
|..+.+.+..+...|..+..... .+.....+..+..+|..|...+..+...|+..
T Consensus 415 l~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~~~~~lE~~ 471 (476)
T 1hci_A 415 IINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHIRVGWELLLTTIARTINEVETQ 471 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCCTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHhcccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998876431 12222577889999999999999999999864
No 2
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.95 E-value=5.9e-26 Score=277.46 Aligned_cols=307 Identities=11% Similarity=0.155 Sum_probs=277.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchh-hhhhHHHHHHHHHHHHhhcChhhHHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPE-GQKLIDKTVALKNNVLESTGPIGKENI 1453 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~-~~~~v~~l~~~~~~L~~~~~~~~~~~i 1453 (2174)
.+..|...++++..||.+++..+.+ .++|.|++.|+.++++|+.|+.++.. ++++|..|+..|..|+..++| +.+.|
T Consensus 7 ~l~~f~~~~~~l~~Wl~~~e~~l~~-~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~-~~~~i 84 (323)
T 3edv_A 7 RLFQLNREVDDLEQWIAEREVVAGS-HELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHS-DAATI 84 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcC-CcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCC-ChHHH
Confidence 3568999999999999999998875 57799999999999999999999998 799999999999999988765 58899
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC--CchHhHHHHHHHHHhh
Q psy4474 1454 NQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDC--TNLDDLEKYKALLQEG 1531 (2174)
Q Consensus 1454 ~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~--~~~~~l~k~~~l~~ei 1531 (2174)
...+..|+.+|+.|...+..|+..|+.+.. ++.|+.++.++..||.+++..|+. +++.+ .....+.+|+.|..++
T Consensus 85 ~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~f~~~~~e~~~Wl~~k~~~l~~--~~~~d~~~v~~l~~~h~~~~~~l 161 (323)
T 3edv_A 85 AEWKDGLNEAWADLLELIDTRTQILAASYE-LHKFYHDAKEIFGRIQDKHKKLPE--ELGRDQNTVETLQRMHTTFEHDI 161 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTCCC--CCCSSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhccc--ccccChHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999995 899999999999999999998853 33333 2236688999999999
Q ss_pred hhhhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1532 LHKEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWL 1611 (2174)
Q Consensus 1532 ~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~l~~wl 1611 (2174)
.+ +++.|..++..|..|....+++.+..|+.++..|+.+|..|+..+..|+..|+++.. ++.|..++.++..||
T Consensus 162 ~~-----~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl 235 (323)
T 3edv_A 162 QA-----LGTQVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDLMLWM 235 (323)
T ss_dssp HH-----HHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
T ss_pred HH-----HHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHH
Confidence 88 678899999999999876655678899999999999999999999999999999996 688999999999999
Q ss_pred HHHhh------hcCCHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHhhH
Q psy4474 1612 KQYID------YSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSL 1685 (2174)
Q Consensus 1612 ~~~e~------~~~d~~~~~~~l~k~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~L~~~~ 1685 (2174)
.+++. .+.|+..++.++.+|+.|..+|..+.+.+..+...|..|+.. +++.+..|..++..|..+|+.|...+
T Consensus 236 ~~~~~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~-~~~~~~~i~~~l~~L~~~w~~l~~~w 314 (323)
T 3edv_A 236 EDVIRQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLAR-KHYASEEIKEKLLQLTEKRKEMIDKW 314 (323)
T ss_dssp HHHHHHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99764 357999999999999999999999999999999999999985 56777899999999999999999999
Q ss_pred HHHHHhHH
Q psy4474 1686 SDVKQGLE 1693 (2174)
Q Consensus 1686 ~~r~~~L~ 1693 (2174)
..|+..|+
T Consensus 315 ~~R~~~L~ 322 (323)
T 3edv_A 315 EDRWEWLR 322 (323)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 99999875
No 3
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.95 E-value=3.9e-25 Score=270.20 Aligned_cols=301 Identities=13% Similarity=0.178 Sum_probs=270.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHH-hHHhHHHHHHHHHHhcCCChHH----HHHHH
Q psy4474 244 YEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATS-HQQDLLQLKDKIESLHQPSEQS----KQQLA 318 (2174)
Q Consensus 244 f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~-~~~~v~~l~~~~~~L~~~~~~~----~~~~~ 318 (2174)
|.+.++++..||.+++..+.+ .++|.|++.++.++++|+.|..++.+ +.++|+.++..|..|+..+|+. ...+.
T Consensus 11 f~~~~~~l~~Wl~~~e~~l~~-~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~~ 89 (323)
T 3edv_A 11 LNREVDDLEQWIAEREVVAGS-HELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSGHSDAATIAEWKD 89 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcC-CcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCChHHHHHHHH
Confidence 999999999999999998875 56789999999999999999999998 7899999999999999877654 67889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhh
Q psy4474 319 TITTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGH 398 (2174)
Q Consensus 319 ~l~~r~~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~ 398 (2174)
.|+.+|..|...+..|...|+.+. .++.|...+.++..||.++...+. .+++.|+..++..+++|+.|+.+|..+..
T Consensus 90 ~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~l~--~~~~~d~~~v~~l~~~h~~~~~~l~~~~~ 166 (323)
T 3edv_A 90 GLNEAWADLLELIDTRTQILAASY-ELHKFYHDAKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHDIQALGT 166 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC--CCCCSSHHHHHHHHHHHHHHHHHTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc--cccccChHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999987 577899999999999999998884 57889999999999999999999999998
Q ss_pred hHHHHhh--hhhhccCc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4474 399 KTVALKN--NVLESTGP-IGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAE 475 (2174)
Q Consensus 399 ~~~~l~~--~~l~~~~~-~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~ 475 (2174)
.+..+.. ..+...+| +++..|+.++..+..+|+.|...+..|...|+.+.. +..|...+.++..||.+++..+.+.
T Consensus 167 ~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl~~~~~~l~~~ 245 (323)
T 3edv_A 167 QVRQLQEDAARLQAAYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDLMLWMEDVIRQIEAQ 245 (323)
T ss_dssp HHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 8877773 22333344 367889999999999999999999999999999985 5789999999999999999999886
Q ss_pred cccCC-CCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 476 KDIGD-CTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH--SPIREETLRLQALYAALVTSVQGLVSQVE 549 (2174)
Q Consensus 476 ~~~~~-~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~--~~i~~~~~~l~~~w~~L~~~~~~r~~~Le 549 (2174)
+.+++ .++..++.+|+.|..+|..+++.+..+...|..|+..+++ ..|..++..|..+|..|...|..|...|+
T Consensus 246 ~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~~~~i~~~l~~L~~~w~~l~~~w~~R~~~L~ 322 (323)
T 3edv_A 246 EKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYASEEIKEKLLQLTEKRKEMIDKWEDRWEWLR 322 (323)
T ss_dssp CCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 65544 4478899999999999999999999999999999998765 45899999999999999999999998875
No 4
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.95 E-value=2.1e-25 Score=273.06 Aligned_cols=311 Identities=12% Similarity=0.164 Sum_probs=280.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENIN 1454 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~ 1454 (2174)
....|...+.++..||..++..|.+. ++|.++.+|+.++++|+.|+.+|..+++.|..+...|..|...+ +.+.+.|.
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~-~~~~~~i~ 81 (322)
T 1u4q_A 4 KQQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSS-AFDTSQVK 81 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCC-SSCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-ccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcC-CCChHHHH
Confidence 45689999999999999999999985 78899999999999999999999999999999999999998754 45688899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-chHhHHHHHHHHHhhhh
Q psy4474 1455 QEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCT-NLDDLEKYKALLQEGLH 1533 (2174)
Q Consensus 1455 ~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~-~~~~l~k~~~l~~ei~~ 1533 (2174)
.++..|+.+|..|...+..|+..|+.++. +.+|..++.++..||.+++..+...+.++... ....+.+|+.|..+|..
T Consensus 82 ~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~~ 160 (322)
T 1u4q_A 82 DKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA 160 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 88999999999999999999888754433322 22568899999999988
Q ss_pred hhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1534 KEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWLKQ 1613 (2174)
Q Consensus 1534 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~l~~wl~~ 1613 (2174)
+.+.+..+...|..|... +++++..|..++..|+.+|..|+..+..|...|++++. ++.|..++.++..||.+
T Consensus 161 -----~~~~i~~l~~~g~~L~~~-~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~ 233 (322)
T 1u4q_A 161 -----HEPAIQGVLDTGKKLSDD-NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINE 233 (322)
T ss_dssp -----HHHHHHHHHHHHHHHHHT-TCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 688899999999999864 45678899999999999999999999999999999987 78899999999999999
Q ss_pred Hhh------hcCCHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHhhHHH
Q psy4474 1614 YID------YSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSLSD 1687 (2174)
Q Consensus 1614 ~e~------~~~d~~~~~~~l~k~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~ 1687 (2174)
.+. .+.|++.++.++++|+.|..++..+.+.+..+...|..++.. .++.++.|..++..|..+|..|...+..
T Consensus 234 ~e~~l~~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~-~~~~~~~i~~~~~~l~~rw~~l~~~~~~ 312 (322)
T 1u4q_A 234 KMTLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKK-NNHHVENITAKMKGLKGKVSDLEKAAAQ 312 (322)
T ss_dssp HHHHHTCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 764 356889999999999999999999999999999999999985 5667888999999999999999999999
Q ss_pred HHHhHHHHH
Q psy4474 1688 VKQGLESRL 1696 (2174)
Q Consensus 1688 r~~~L~~~~ 1696 (2174)
|..+|+++.
T Consensus 313 R~~~L~~a~ 321 (322)
T 1u4q_A 313 RKAKLDENS 321 (322)
T ss_dssp HHHHHTC--
T ss_pred HHHHHhhcc
Confidence 999998764
No 5
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.94 E-value=7.5e-25 Score=283.76 Aligned_cols=420 Identities=14% Similarity=0.204 Sum_probs=335.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhh-h-------hhhHHHHhhhhhhcc
Q psy4474 340 GIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGR-I-------GHKTVALKNNVLEST 411 (2174)
Q Consensus 340 ~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~-~-------~~~~~~l~~~~l~~~ 411 (2174)
++-.....|...+.++..||.++...+.+. +++.++..+...+..++.+.....+ . +..+..++..+....
T Consensus 8 e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~-~~~~~l~~~~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~l~~~~ 86 (476)
T 1hci_A 8 ENERLMEEYERLASELLEWIRRTIPWLENR-TPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISN 86 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHTTCC-CCCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCcHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 344567899999999999999999999985 5667888888887777776554431 1 112233333222222
Q ss_pred CccccccHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-cCC
Q psy4474 412 GPIGKENINQEINQITLDWTNLQNTL----------QVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKD-IGD 480 (2174)
Q Consensus 412 ~~~~~~~i~~~~~~l~~~w~~L~~~~----------~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~-~~~ 480 (2174)
.|.-.+.+......+...|+.|.... ..|..+|+.+ +..|...+..+.+||.+++..+.+.++ |++
T Consensus 87 ~~~~~~~~~~~~~~i~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~---~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~d 163 (476)
T 1hci_A 87 RPAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESAS 163 (476)
T ss_dssp SCCCCCCGGGCSSSHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCC
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccCCC
Confidence 22222224445566777777776654 4555666655 568999999999999999999987666 544
Q ss_pred -CCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH-
Q psy4474 481 -CTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH--SPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQT- 556 (2174)
Q Consensus 481 -~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~--~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~- 556 (2174)
..+..++.+|++|+.+|.++++.|..+...|..|+..+++ ..|..++..|..+|..|...+..|..+|+..+..++
T Consensus 164 l~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~~~ 243 (476)
T 1hci_A 164 LTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLET 243 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3478999999999999999999999999999999988766 458889999999999999999999999998877665
Q ss_pred ------HHHHHHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHhccccChhHHHH---HHHHHHHhccCCC--
Q psy4474 557 ------EFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVL---QDTFTKALDTTPS-- 625 (2174)
Q Consensus 557 ------~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~el~~~~~~l~~l---~~~~~~l~~~~~~-- 625 (2174)
.|...+.++..||..++..+.+...+.|+++++.++++|+.|..++......+..+ ...+..++..+++
T Consensus 244 ~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~~~~~ 323 (476)
T 1hci_A 244 IDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRI 323 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 79999999999999999999887778999999999999999999999888877776 5667888877664
Q ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------hHHHHHHHHHHHHhHHHHHhhhCCCCCcccccchh
Q psy4474 626 -DQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIAR-------WNELDDLYNRFNMWLSGVENKLNEPSPVFTEIDLN 697 (2174)
Q Consensus 626 -~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~-------~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~ 697 (2174)
...+.|...+..|..+|..|...+..|+..|+.++.. +..|...++.+..||.+++..+.+.+.+. +
T Consensus 324 ~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~--~--- 398 (476)
T 1hci_A 324 SSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQI--T--- 398 (476)
T ss_dssp CSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTT--T---
T ss_pred CCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC--C---
Confidence 2455688899999999999999999999999999885 36899999999999999999987532211 1
Q ss_pred hhhHHhhhhHHhhhhhhhhHHHHHhhhHhHHHHHHHHHHHHHHHHHHchhChHHHHHHHHHHhhh----hhhhhhhhhHH
Q psy4474 698 TKWQQYVNDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQLSEW----DSSIVPKVSDL 773 (2174)
Q Consensus 698 ~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~l~k~~~l~~el~~~~~~l~~l~~~~~~L~~~----~~~i~~~l~~L 773 (2174)
+.++.++++|+.|..+|....+.+..+...++.+... .+.....+..|
T Consensus 399 ----------------------------~~le~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~l 450 (476)
T 1hci_A 399 ----------------------------GALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHTNYTMEHI 450 (476)
T ss_dssp ----------------------------TSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTCSCHHHHH
T ss_pred ----------------------------CCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCCcchhhHHHH
Confidence 2445678999999999999999999999888877653 22223468999
Q ss_pred HHHHHHHHHHHHhhHhhHHHHHH
Q psy4474 774 ETRWAAVKSAWDAKHSDLSSEIA 796 (2174)
Q Consensus 774 ~~rw~~L~~~~~~r~~~L~~~l~ 796 (2174)
+.+|..|...+..+...|+..+.
T Consensus 451 ~~~W~~L~~~~~~~~~~lE~~i~ 473 (476)
T 1hci_A 451 RVGWELLLTTIARTINEVETQIL 473 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999987653
No 6
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.94 E-value=2.5e-24 Score=263.40 Aligned_cols=313 Identities=13% Similarity=0.182 Sum_probs=283.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhhhHHHHhh--hhhhccCccccccHHH
Q psy4474 344 IHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGHKTVALKN--NVLESTGPIGKENINQ 421 (2174)
Q Consensus 344 ~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~--~~l~~~~~~~~~~i~~ 421 (2174)
....|...+.++..||.+++..+.+. ++|.|+.++..++++|+.|+.++.....++..+.. ..+...++.++..|..
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~~~~~~~~i~~ 82 (322)
T 1u4q_A 4 KQQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKD 82 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTCCSSCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-ccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCCChHHHHH
Confidence 35789999999999999999999974 78899999999999999999999999998888773 3444567888899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCC-CcHHHHHHHHHHHHHHHhh
Q psy4474 422 EINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIGDC-TNLDDLEKYKALLQEVISH 500 (2174)
Q Consensus 422 ~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~-~~~~~l~~~k~l~~ei~~~ 500 (2174)
++..|..+|..|...+..|+..|+.++. +..|...+..+..||.+++..+.+.+++++. .+..++.+|+.|+.+|..+
T Consensus 83 ~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el~~~ 161 (322)
T 1u4q_A 83 KRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAH 161 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999987 5579999999999999999988887766543 3688999999999999999
Q ss_pred hhhHHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhh
Q psy4474 501 NSDMETLNDKCEALMELAAH--SPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQE 578 (2174)
Q Consensus 501 ~~~l~~l~~~~~~L~~~~~~--~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~ 578 (2174)
.+.|..+...|..|+..+++ ..|+.++..|..+|..|...+..|..+|+.++. +..|..++.++..||...+..+.+
T Consensus 162 ~~~i~~l~~~g~~L~~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~l~~ 240 (322)
T 1u4q_A 162 EPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVAS 240 (322)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999988766 558899999999999999999999999998765 668999999999999999999987
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHhccccChhHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 579 CAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKS 658 (2174)
Q Consensus 579 ~~~~~d~~~~~~~l~~~~~~~~el~~~~~~l~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~ 658 (2174)
.+.|.|+.+++.++++|+.|..++..+...|..+...|..|+..++| +++.|...+..|..+|..|...+..|+..|++
T Consensus 241 ~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~~~~~~l~~rw~~l~~~~~~R~~~L~~ 319 (322)
T 1u4q_A 241 EDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNH-HVENITAKMKGLKGKVSDLEKAAAQRKAKLDE 319 (322)
T ss_dssp CCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 77789999999999999999999999999999999999999998765 46789999999999999999999999999987
Q ss_pred HH
Q psy4474 659 YI 660 (2174)
Q Consensus 659 ~~ 660 (2174)
+.
T Consensus 320 a~ 321 (322)
T 1u4q_A 320 NS 321 (322)
T ss_dssp --
T ss_pred cc
Confidence 64
No 7
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.94 E-value=6.9e-25 Score=268.64 Aligned_cols=313 Identities=12% Similarity=0.128 Sum_probs=250.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENIN 1454 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~ 1454 (2174)
..++|...+.++.+||.+++..+.+ .++|.|+.+++.++++|+.|+.+|..+++.|+.+...|..|...++| +.+.|.
T Consensus 5 ~~qqf~~~~~el~~Wl~e~~~~l~~-~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~-~~~~i~ 82 (326)
T 3kbt_A 5 EAQQYYLDADEAEAWIGEQELYVIS-DEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHP-EGEQII 82 (326)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTSC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCC-ChHHHH
Confidence 4678999999999999999999887 47889999999999999999999999999999999999999987765 588999
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCch-HhHHHHHHHHHhhhh
Q psy4474 1455 QEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNL-DDLEKYKALLQEGLH 1533 (2174)
Q Consensus 1455 ~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~~~-~~l~k~~~l~~ei~~ 1533 (2174)
..+..|+.+|+.|...+..|+..|+.++. +..|...+.++..||.+++..+....+++..... ..+.+|+.|..++..
T Consensus 83 ~~l~~l~~~w~~L~~~~~~R~~~Le~~l~-l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~~ 161 (326)
T 3kbt_A 83 RLQGQVDKHYAGLKDVAEERKRKLENMYH-LFQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGA 161 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999995 7899999999999999999998875433322222 567899999999876
Q ss_pred hhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1534 KEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWLKQ 1613 (2174)
Q Consensus 1534 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~l~~wl~~ 1613 (2174)
. +.+.|..++..|..|+.. +++++..|..++..|+.+|..|...+..|...|+.++. ++.|..+++++..||.+
T Consensus 162 ~----~~~~v~~l~~~~~~L~~~-~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~-~~~f~~~~~e~~~Wl~e 235 (326)
T 3kbt_A 162 I----GQERVDNVNAFIERLIDA-GHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDE 235 (326)
T ss_dssp H----HHHHHHHHHHHHHHHHHH-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
T ss_pred h----hhHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHH
Confidence 2 367899999999999875 44567899999999999999999999999999999986 77899999999999999
Q ss_pred Hhh-----hcCCHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHhhcccCCCCCchHHHHHHHHHHHHHHHHHhhHHHH
Q psy4474 1614 YID-----YSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTNEAMYRDLANLRYDFEKCVSSLSDV 1688 (2174)
Q Consensus 1614 ~e~-----~~~d~~~~~~~l~k~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~r 1688 (2174)
.+. .+.|+.+++.++.+|+.|+.+|..+.+.+..|...+..|....++..+..|..+++.|..+|+.|...+..|
T Consensus 236 k~~~L~~~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R 315 (326)
T 3kbt_A 236 KHRELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGR 315 (326)
T ss_dssp HHHC---------------------CHHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC------
T ss_pred HHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 753 356888999999999999999999999999999999999885444356789999999999999999999999
Q ss_pred HHhHHHHH
Q psy4474 1689 KQGLESRL 1696 (2174)
Q Consensus 1689 ~~~L~~~~ 1696 (2174)
...|++++
T Consensus 316 ~~~L~~a~ 323 (326)
T 3kbt_A 316 RTQLVDTA 323 (326)
T ss_dssp --------
T ss_pred HHHHHHHH
Confidence 99999875
No 8
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.93 E-value=4e-24 Score=261.86 Aligned_cols=305 Identities=11% Similarity=0.121 Sum_probs=244.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChHH----HHHHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQS----KQQLA 318 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~~----~~~~~ 318 (2174)
+|+.+++++.+||.+++..+.+ .++|.|+..++.++++|+.|+.+|.++.+.|+.+...|..|+..++|. ..++.
T Consensus 8 qf~~~~~el~~Wl~e~~~~l~~-~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~l~ 86 (326)
T 3kbt_A 8 QYYLDADEAEAWIGEQELYVIS-DEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAGHPEGEQIIRLQG 86 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHTTSC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCChHHHHHHHH
Confidence 4999999999999999998887 567899999999999999999999999999999999999998765442 67889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhh-hh
Q psy4474 319 TITTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGR-IG 397 (2174)
Q Consensus 319 ~l~~r~~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~-~~ 397 (2174)
.|+.+|..|+..+..|..+|+.++. +..|...+.++..||.+++..+.+ .++|.|+..+...+++|+.|..++.. ..
T Consensus 87 ~l~~~w~~L~~~~~~R~~~Le~~l~-l~~f~~~~~~l~~Wl~~~e~~l~~-~~~g~d~~~v~~l~~~~~~f~~el~~~~~ 164 (326)
T 3kbt_A 87 QVDKHYAGLKDVAEERKRKLENMYH-LFQLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARETGAIGQ 164 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcc-ccCCCCHHHHHHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999985 568899999999999999998876 46788999999999999999999998 56
Q ss_pred hhHHHHhh--hhhhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhc
Q psy4474 398 HKTVALKN--NVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAE 475 (2174)
Q Consensus 398 ~~~~~l~~--~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~ 475 (2174)
.++..++. ..+...+|++++.|+..++.|+.+|..|...+..|...|..+.. +..|...++.+..||.+++..|+ .
T Consensus 165 ~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~-~~~f~~~~~e~~~Wl~ek~~~L~-~ 242 (326)
T 3kbt_A 165 ERVDNVNAFIERLIDAGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDEKHRELP-E 242 (326)
T ss_dssp HHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCc-c
Confidence 77777663 34445566778899999999999999999999999999999984 56899999999999999999885 4
Q ss_pred cccC-CCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC---CcchHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 476 KDIG-DCTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH---SPIREETLRLQALYAALVTSVQGLVSQVEKN 551 (2174)
Q Consensus 476 ~~~~-~~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~---~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~ 551 (2174)
+++. ...+..++.+|++|+.+|..+++.|+.|...|..|...+++ ..|..++..+..+|..|...+..|...|+.+
T Consensus 243 ~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a 322 (326)
T 3kbt_A 243 DVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDT 322 (326)
T ss_dssp ------------------CHHHHHHHHHHHHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHC-------------
T ss_pred cccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4443 34578999999999999999999999999999999987653 4588899999999999999999999999876
Q ss_pred H
Q psy4474 552 L 552 (2174)
Q Consensus 552 ~ 552 (2174)
.
T Consensus 323 ~ 323 (326)
T 3kbt_A 323 A 323 (326)
T ss_dssp -
T ss_pred H
Confidence 4
No 9
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.88 E-value=1.4e-20 Score=262.01 Aligned_cols=303 Identities=14% Similarity=0.166 Sum_probs=255.7
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChHH----HHHHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQS----KQQLA 318 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~~----~~~~~ 318 (2174)
.|...++++..||.+++..+...+++..|++.++.++++|+.|+.+|.++.+.|..+...|..|+..+++. ..++.
T Consensus 374 ~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~ 453 (863)
T 1sjj_A 374 KFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQ 453 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHH
Confidence 49999999999999999999885544449999999999999999999999999999999999998766543 67899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHH
Q psy4474 319 TITTRHGNVLKRAQKFTEAYEGIVSIHQ-------AYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEK 391 (2174)
Q Consensus 319 ~l~~r~~~L~~~~~~r~~~Le~~~~~~~-------~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~ 391 (2174)
.|..+|..|+..+..|..+|+.++..++ .|...+.++..||.+++..+.+. +++.++..++.++++|+.|..
T Consensus 454 ~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~-~~g~dl~~ve~ll~kh~~~~~ 532 (863)
T 1sjj_A 454 KICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDT-FIVHTIEEIQGLTTAHEQFKA 532 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCC-CCCSSSGGGHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcch-HhhccHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999998876 78888899999999999999875 568899999999999999999
Q ss_pred HHhhhhhhHHHHh---hhhhhc------cCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHH
Q psy4474 392 ELGRIGHKTVALK---NNVLES------TGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCL-------SIWNDFL 455 (2174)
Q Consensus 392 ~l~~~~~~~~~l~---~~~l~~------~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~-------~~~~~f~ 455 (2174)
++......+..+. ..+... .++...+.+..++..|..+|+.|...+..|..+|+.++ ..++.|.
T Consensus 533 ~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~ 612 (863)
T 1sjj_A 533 TLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFG 612 (863)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHH
Confidence 9998876555443 222221 12233455666799999999999999999999999988 5678899
Q ss_pred HHHHHHHHHHHHHHHhhhhccccCCCCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcchHHHHHHHHH
Q psy4474 456 SSKNTLEKWIEGFQKKIEAEKDIGDCTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH--SPIREETLRLQAL 533 (2174)
Q Consensus 456 ~~~~~l~~Wl~~~~~~l~~~~~~~~~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~--~~i~~~~~~l~~~ 533 (2174)
..++.+..||.+++..+.+.+.+.+..+..++.+|+.+..++..+.+.+..+...+..|....++ +.+......+...
T Consensus 613 ~~a~~~~~Wi~e~e~~l~~~~~~~~~~le~~l~~~~~~~~el~~~~~~i~~l~~l~~~L~~~~~~~~~~~~~s~e~l~i~ 692 (863)
T 1sjj_A 613 AQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDNKHTNYTMEHIRVG 692 (863)
T ss_dssp HHHHHHHHHHHHHHHHTTSCTTCTTTSSHHHHHHHHHHHHHHHTTGGGHHHHHHHHHHHHTTTCCCCTTCSSTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCCCcccccHHHHHHH
Confidence 99999999999999999875554445678899999999999999999999999999999887653 3344556677788
Q ss_pred HHHHHHHHHHHHH
Q psy4474 534 YAALVTSVQGLVS 546 (2174)
Q Consensus 534 w~~L~~~~~~r~~ 546 (2174)
|..+...+..+..
T Consensus 693 ~~eF~~~~~~~~~ 705 (863)
T 1sjj_A 693 WEQLLTTIARTIN 705 (863)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8887766655443
No 10
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.88 E-value=1.3e-19 Score=220.67 Aligned_cols=318 Identities=11% Similarity=0.167 Sum_probs=278.3
Q ss_pred HHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhhhHHHHhhhhhhccCccccccHHHHHHHHHHH
Q psy4474 350 KAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGHKTVALKNNVLESTGPIGKENINQEINQITLD 429 (2174)
Q Consensus 350 ~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~~~l~~~~l~~~~~~~~~~i~~~~~~l~~~ 429 (2174)
+.++++..||.+++..|.+ .++|.|+.+++.++++|+.|+.++..+.+++..+.... + . ..++..|..+
T Consensus 9 r~v~dl~~Wl~E~~~~L~S-~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a----~--~----~~~~~~L~~~ 77 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDM-VAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADL----R--E----KSAIYQLEEE 77 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTS-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----C--C----HHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh----c--C----cHHHHHHHHH
Confidence 5789999999999999987 58999999999999999999999999999998887542 1 1 2367899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccccCC-CCcHHHHHHHHHHHHHHHhhhhhHHHHH
Q psy4474 430 WTNLQNTLQVIDKHHAKCLSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIGD-CTNLDDLEKYKALLQEVISHNSDMETLN 508 (2174)
Q Consensus 430 w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~-~~~~~~l~~~k~l~~ei~~~~~~l~~l~ 508 (2174)
|..|...+..|+..|+. +..|..++++...||.+++..+.+.+.+++ .++...+.+|++|+.||.+++++|..+.
T Consensus 78 y~~L~~~a~~Rr~~Le~----L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~ 153 (450)
T 3r6n_A 78 YENLLKASFERMDHLRQ----LQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKELNKLK 153 (450)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHHHHHHH
Confidence 99999999999999983 357999999999999999999888777654 3567888999999999999999999999
Q ss_pred HHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhh---cCCC
Q psy4474 509 DKCEALMELAAH--SPIREETLRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQEC---AGNG 583 (2174)
Q Consensus 509 ~~~~~L~~~~~~--~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~---~~~~ 583 (2174)
..|+.|+..+|| ..|+.++..|...|..|...+..|..+|..+. .++.|+.+++++.+||.+.+..+.+. +.+.
T Consensus 154 ~~G~~Li~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~-~~~QF~~Da~EaesWL~eke~~l~s~y~~D~g~ 232 (450)
T 3r6n_A 154 QESDQLVLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENA-AYFQFFEEAQSTEAYLKGLQDSIRKKYPCDKNM 232 (450)
T ss_dssp HHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHSCCCTTC
T ss_pred HHHHHHHHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHhHHHHHHHHHHHHHHHHHHhcccccCcCCC
Confidence 999999999988 56999999999999999999999999999875 55689999999999999999999886 4578
Q ss_pred CHHHHHHHHHHHHHHHHhccccChhHHHHHHHHHHHhccC----------------------------------------
Q psy4474 584 SKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALDTT---------------------------------------- 623 (2174)
Q Consensus 584 d~~~~~~~l~~~~~~~~el~~~~~~l~~l~~~~~~l~~~~---------------------------------------- 623 (2174)
|..+++.+|++|..++.+|.+.+..|..|...+..++...
T Consensus 233 d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge~~~L~~ns~ 312 (450)
T 3r6n_A 233 PLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNNE 312 (450)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTCEEEEEECSS
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCCEEEEecCCC
Confidence 9999999999999999999999999999999988865310
Q ss_pred -----------------------CCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHH
Q psy4474 624 -----------------------PSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGV 680 (2174)
Q Consensus 624 -----------------------~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~ 680 (2174)
|||+ +..-..+..|...|+.+...+..+...+...+. |+.|...++.+.+|.-.+
T Consensus 313 ~~~W~V~~~~G~~~~vPavcf~ipppd-~eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~~-~~~~~~d~~~i~~w~~~~ 390 (450)
T 3r6n_A 313 RSKWYVTGPGGVDMLVPSVGLIIPPPN-PLAVDLSCKIEQYYEAILALWNQLYINMKSLVS-WHYCMIDIEKIRAMTIAK 390 (450)
T ss_dssp SSEEEEECSSSCCEEEEGGGEECCSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTCCHHH
T ss_pred CCceEEecCCCCeeccceeEEecCCCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHHH
Confidence 1122 234677889999999999999999999999874 889999999999999987
Q ss_pred HhhhC
Q psy4474 681 ENKLN 685 (2174)
Q Consensus 681 e~~l~ 685 (2174)
-..+.
T Consensus 391 ~~~~~ 395 (450)
T 3r6n_A 391 LKTMR 395 (450)
T ss_dssp HTTSC
T ss_pred HHhcC
Confidence 66554
No 11
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.88 E-value=1.4e-19 Score=220.39 Aligned_cols=313 Identities=13% Similarity=0.148 Sum_probs=269.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHHHHHHH
Q psy4474 1381 QAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEINQI 1460 (2174)
Q Consensus 1381 ~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~~l~~L 1460 (2174)
+.++++..||.+++..|.+ .++|.|+.+|+.++++|+.|+++|..+...|..+...+ +.+ ..+..|
T Consensus 9 r~v~dl~~Wl~E~~~~L~S-~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a------~~~-------~~~~~L 74 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDM-VAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADL------REK-------SAIYQL 74 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTS-CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CCH-------HHHHHH
T ss_pred ccHHHHHHHHHHHHHhcCc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh------cCc-------HHHHHH
Confidence 5678899999999999987 48899999999999999999999999999999886542 111 246789
Q ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCch-HhHHHHHHHHHhhhhhhchhh
Q psy4474 1461 TLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNL-DDLEKYKALLQEGLHKEADNK 1539 (2174)
Q Consensus 1461 ~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~~~-~~l~k~~~l~~ei~~~~~~~~ 1539 (2174)
..+|..|...+..|+..|+. +.+|..++.+...||.+++..+.+.+.++...+. ..+.+|+.|..||.+ |
T Consensus 75 ~~~y~~L~~~a~~Rr~~Le~----L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~-----~ 145 (450)
T 3r6n_A 75 EEEYENLLKASFERMDHLRQ----LQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEV-----K 145 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHH-----H
T ss_pred HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHH-----c
Confidence 99999999999999999983 6799999999999999999988886555444333 557899999999998 6
Q ss_pred HHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh---
Q psy4474 1540 KVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQERKAMQDKISKLQSWLKQYID--- 1616 (2174)
Q Consensus 1540 ~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~l~~wl~~~e~--- 1616 (2174)
++.+..+...|..|+.. +|+.+..|+.++..|+.+|..|...+..|...|.++.. ++.|..+++++.+||.+.+.
T Consensus 146 e~~i~~v~~~G~~Li~~-~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~QF~~Da~EaesWL~eke~~l~ 223 (450)
T 3r6n_A 146 EKELNKLKQESDQLVLN-QHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAA-YFQFFEEAQSTEAYLKGLQDSIR 223 (450)
T ss_dssp HHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHc-CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhc
Confidence 88899999999999874 67889999999999999999999999999999999997 67888899999999998543
Q ss_pred ------hcCCHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHhhcc---------------------------------
Q psy4474 1617 ------YSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSR--------------------------------- 1657 (2174)
Q Consensus 1617 ------~~~d~~~~~~~l~k~~~~~~el~~~~~~~~~l~~~~~~l~~--------------------------------- 1657 (2174)
.+.|...++.++++|+.++.+|......+..|...+..+..
T Consensus 224 s~y~~D~g~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge 303 (450)
T 3r6n_A 224 KKYPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGD 303 (450)
T ss_dssp HHSCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTC
T ss_pred ccccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCC
Confidence 35678899999999999999999999999999999987653
Q ss_pred ------------------------------cCCCCCchHHHHHHHHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHH
Q psy4474 1658 ------------------------------KLPSRTNEAMYRDLANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLG 1707 (2174)
Q Consensus 1658 ------------------------------~~~~~~~~~i~~~l~~l~~~w~~L~~~~~~r~~~L~~~~~~~~~f~~~~~ 1707 (2174)
.++||.+ +.......|...|..|.+.|..+..++...+ .|+.|..++.
T Consensus 304 ~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ipppd~-eai~~a~~l~~~~~~~~~lw~~~~~~~~~~~-~~~~~~~d~~ 381 (450)
T 3r6n_A 304 ECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPPNP-LAVDLSCKIEQYYEAILALWNQLYINMKSLV-SWHYCMIDIE 381 (450)
T ss_dssp EEEEEECSSSSEEEEECSSSCCEEEEGGGEECCSCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred EEEEecCCCCCceEEecCCCCeeccceeEEecCCCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
Confidence 1122222 3456678899999999999999999999976 7999999999
Q ss_pred HHHHHHHHHHHHH
Q psy4474 1708 KLITWLNDTENVL 1720 (2174)
Q Consensus 1708 ~l~~Wl~~~e~~L 1720 (2174)
.+.+|...+-..+
T Consensus 382 ~i~~w~~~~~~~~ 394 (450)
T 3r6n_A 382 KIRAMTIAKLKTM 394 (450)
T ss_dssp HHHTCCHHHHTTS
T ss_pred HHHhhhHHHHHhc
Confidence 9999988876655
No 12
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.87 E-value=2.2e-20 Score=260.03 Aligned_cols=409 Identities=11% Similarity=0.184 Sum_probs=325.5
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHh----HHhHHHH-HHHHHHhcCCC-----
Q psy4474 241 WCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSH----QQDLLQL-KDKIESLHQPS----- 310 (2174)
Q Consensus 241 w~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~----~~~v~~l-~~~~~~L~~~~----- 310 (2174)
+..|...+.++..||.+++..+.+. ++|.++..++.++++|..+......- ...++.+ ...+..+...+
T Consensus 252 ~~~y~~~~~el~~Wi~~~~~~l~~~-~~~~~l~~v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~~~~~ 330 (863)
T 1sjj_A 252 MEDYEKLASDLLEWIRRTIPWLENR-APENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFM 330 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGSSCC-CCCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcc-CcCCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 4579999999999999999999875 57899999999999999998854211 1122222 22233332211
Q ss_pred hHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-cHhhH
Q psy4474 311 EQSKQQLATITTRHGNVLKRAQ----------KFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTL-ERVSL 379 (2174)
Q Consensus 311 ~~~~~~~~~l~~r~~~L~~~~~----------~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~-d~~~~ 379 (2174)
++.......|+.+|..|..... .|..+|+. ....|...+.++..||.+++..+.+. +++. ++..+
T Consensus 331 ~~~~~~~~~i~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~---l~~~F~~~~~~~~~Wl~~~e~~l~~~-~~g~~dl~~v 406 (863)
T 1sjj_A 331 PSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDH---LAEKFRQKASIHESWTDGKEAMLQQK-DYETATLSEI 406 (863)
T ss_dssp CSTTSCGGGHHHHHHHHHHHHTTTHHHHHHHHEEHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHSC-TTTSSCHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHhhcc-cccCCCHHHH
Confidence 1223356778888888887654 44555654 46889999999999999999999984 5555 99999
Q ss_pred HHHHHHHHHHHHHHhhhhhhHHHHhh--hhhhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----
Q psy4474 380 HSNLERLKNLEKELGRIGHKTVALKN--NVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSIWN----- 452 (2174)
Q Consensus 380 ~~~l~~~~~l~~~l~~~~~~~~~l~~--~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~----- 452 (2174)
+.++++|+.|+.++..+..++..+.. ..+...++.+++.|..++..|..+|+.|...+..|+.+|+.++..++
T Consensus 407 ~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l 486 (863)
T 1sjj_A 407 KALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQL 486 (863)
T ss_dssp HHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888877763 44556677888999999999999999999999999999999998775
Q ss_pred --HHHHHHHHHHHHHHHHHHhhhhccccCC-CCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhc---------cC
Q psy4474 453 --DFLSSKNTLEKWIEGFQKKIEAEKDIGD-CTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELA---------AH 520 (2174)
Q Consensus 453 --~f~~~~~~l~~Wl~~~~~~l~~~~~~~~-~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~---------~~ 520 (2174)
.|...+..+.+||.+++..+.+.+.+++ .++..++++|+.+..+|..+++.+..+...+..+...+ ..
T Consensus 487 ~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~ 566 (863)
T 1sjj_A 487 YLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTN 566 (863)
T ss_dssp HHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCC
Confidence 7888899999999999999988666544 45899999999999999999999999999999887642 11
Q ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHH
Q psy4474 521 SPIREETLRLQALYAALVTSVQGLVSQVEKNL-------SDQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLD 593 (2174)
Q Consensus 521 ~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~-------~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~ 593 (2174)
+.+...+..|..+|..|...+..|..+|+..+ ..++.|..++.++..||.+.+..+.+...+ .+.+++.++.
T Consensus 567 ~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~~~~~-~~~~le~~l~ 645 (863)
T 1sjj_A 567 PYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIE-MHGTLEDQLN 645 (863)
T ss_dssp SSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTC-TTTSSHHHHH
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC-CCCCHHHHHH
Confidence 44566788999999999999999999999877 457889999999999999999999874332 3356778899
Q ss_pred HHHHHHHhccccChhHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 594 TVNMVAERIPEGQHLMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQL 656 (2174)
Q Consensus 594 ~~~~~~~el~~~~~~l~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~L 656 (2174)
+|+.|..++....+.+..+...+..+....++.. +.+.-.+..+.-.|..+...+..+...+
T Consensus 646 ~~~~~~~el~~~~~~i~~l~~l~~~L~~~~~~~~-~~~~~s~e~l~i~~~eF~~~~~~~~~~~ 707 (863)
T 1sjj_A 646 HLRQYEKSIVNYKPKIDQLEGDHQQIQEALIFDN-KHTNYTMEHIRVGWEQLLTTIARTINEV 707 (863)
T ss_dssp HHHHHHHHHHTTGGGHHHHHHHHHHHHTTTCCCC-TTCSSTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHhcCCCC-CcccccHHHHHHHHHHHHHHHHHHHhhH
Confidence 9999999999999999999999999877654221 1223455667778887776665554433
No 13
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.80 E-value=9.3e-19 Score=198.59 Aligned_cols=212 Identities=13% Similarity=0.172 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchh-hhhhHHHHHHHHHHHHhhcChhhHHHHHH
Q psy4474 1377 EAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPE-GQKLIDKTVALKNNVLESTGPIGKENINQ 1455 (2174)
Q Consensus 1377 ~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~-~~~~v~~l~~~~~~L~~~~~~~~~~~i~~ 1455 (2174)
..|...++++..||.+++..+.+ .++|.|++.|+.++++|+.|+.++.. ++++|..|+..|..|+..++| +.+.|+.
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~-~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~-~~~~i~~ 81 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHS-EAATIAE 81 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCC-CHHHHHH
Confidence 47999999999999999999887 48899999999999999999999998 899999999999999998776 5788999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCchHhHHHHHHHHHhhhhhh
Q psy4474 1456 EINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNLDDLEKYKALLQEGLHKE 1535 (2174)
Q Consensus 1456 ~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~~~~~l~k~~~l~~ei~~~~ 1535 (2174)
++..|+.+|+.|...+..|+..|+.+.. +++|+.++.++..||.+++..|+.+.+.+..+....+.+|+.|+.++.+
T Consensus 82 ~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~F~~~~~e~~~Wl~ek~~~l~~~~g~dl~~v~~l~~~h~~~e~dL~~-- 158 (218)
T 3edu_A 82 WKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHL-- 158 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCC-------------CCSHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCccCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 9999999999999999999999999985 8999999999999999999999532212223334667899999999998
Q ss_pred chhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1536 ADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAAQE 1596 (2174)
Q Consensus 1536 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~~~ 1596 (2174)
+++.|..+...|..|....+++.+..|..++..|+.+|..|+..+..|+..|++++..
T Consensus 159 ---~~~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 216 (218)
T 3edu_A 159 ---LGVQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216 (218)
T ss_dssp ---HHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred ---HHHHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6888999999999998765556788999999999999999999999999999998763
No 14
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.80 E-value=1.9e-18 Score=196.39 Aligned_cols=210 Identities=10% Similarity=0.121 Sum_probs=188.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHHH
Q psy4474 1377 EAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQE 1456 (2174)
Q Consensus 1377 ~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~~ 1456 (2174)
++|...+.++..||.+++..+++. ++|+|+.+|+.++++|+.|+.+|..+++.|..+...|..|+..++.++.+.|+..
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~-~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~ 81 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASE-DMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQR 81 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCC-CCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHH
Confidence 479999999999999999999875 5788999999999999999999999999999999999999987655567899999
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-chHhHHHHHHHHHhhhhhh
Q psy4474 1457 INQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCT-NLDDLEKYKALLQEGLHKE 1535 (2174)
Q Consensus 1457 l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~-~~~~l~k~~~l~~ei~~~~ 1535 (2174)
+..|+.+|..|...+..|+..|++++. ++.|..++.++..||.++|..|...+++++.. ....+++|+.|..++.+
T Consensus 82 l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~-- 158 (214)
T 1s35_A 82 LEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMEN-- 158 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH--
Confidence 999999999999999999999999997 99999999999999999999998765444322 33678999999999988
Q ss_pred chhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1536 ADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAA 1594 (2174)
Q Consensus 1536 ~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~ 1594 (2174)
+...+..+...|..|... +++++..|..++..|..||+.|...+..|...|++++
T Consensus 159 ---~~~~i~~l~~~a~~L~~~-~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 159 ---NRDKVLSPVDSGNKLVAE-GNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp ---HHHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred ---hHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 677899999999999875 5567889999999999999999999999999998754
No 15
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.79 E-value=3.2e-18 Score=194.84 Aligned_cols=211 Identities=12% Similarity=0.122 Sum_probs=186.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENIN 1454 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~ 1454 (2174)
....|...+.++..||.+++..|.+. ++|.|+..|+.++++|+.|+.+|..+++.|..+...|..|+..++ .+.+.|.
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~-~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~~-~~~~~i~ 81 (216)
T 1u5p_A 4 KQQNFNTGIKDFDFWLSEVEALLASE-DYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSSA-FDTSQVK 81 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSS-SCTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CChHHHH
Confidence 35689999999999999999999885 788999999999999999999999999999999999999997764 4688899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-chHhHHHHHHHHHhhhh
Q psy4474 1455 QEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCT-NLDDLEKYKALLQEGLH 1533 (2174)
Q Consensus 1455 ~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~-~~~~l~k~~~l~~ei~~ 1533 (2174)
.++..|+.+|..|...+..|+..|+.++. +.+|..+++++..||.+++..+...+.++... ....+.+|+.|..+|.+
T Consensus 82 ~~~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~~ 160 (216)
T 1u5p_A 82 DKRETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAA 160 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999997 78999999999999999999877644333222 22568899999999998
Q ss_pred hhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1534 KEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAA 1594 (2174)
Q Consensus 1534 ~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~ 1594 (2174)
+.+.+..+...|..|... +++++..|..++..|+.+|..|+..+..|...|++++
T Consensus 161 -----~~~~i~~l~~~g~~L~~~-~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 161 -----HEPAIQGVLDTGKKLSDD-NTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp -----HHHHHHHHHHHHHHHHHT-CSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred -----hHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 688899999999999874 5567889999999999999999999999999998765
No 16
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.79 E-value=9e-18 Score=191.02 Aligned_cols=210 Identities=15% Similarity=0.220 Sum_probs=188.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHH
Q psy4474 1376 HEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQ 1455 (2174)
Q Consensus 1376 ~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~ 1455 (2174)
..+|...+.++..||.+++..+.+ .++|+|+..|+.++++|+.|+.+|..+.+.|..+...|..|+..+++ +.+.|..
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~-~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~-~~~~i~~ 79 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDNTI-GKEEIQQ 79 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCC-cHHHHHH
Confidence 357999999999999999998887 47889999999999999999999999999999999999999988765 5788999
Q ss_pred HHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCC-chHhHHHHHHHHHhhhhh
Q psy4474 1456 EINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCT-NLDDLEKYKALLQEGLHK 1534 (2174)
Q Consensus 1456 ~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~-~~~~l~k~~~l~~ei~~~ 1534 (2174)
++..|+.+|..|...+..|+..|+.++. +++|..++.++..||.+++..+.+...+++.. ....+++|+.|..++..
T Consensus 80 ~~~~l~~~w~~L~~~~~~R~~~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~~~v~~ll~~h~~~~~el~~- 157 (213)
T 1cun_A 80 RLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTV- 157 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH-
Confidence 9999999999999999999999999997 79999999999999999999887754433322 23678999999999988
Q ss_pred hchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1535 EADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVANAA 1594 (2174)
Q Consensus 1535 ~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~~~ 1594 (2174)
+.+.|..+...|..|... +++++..|..++..|..+|..|+..+..|+..|+++.
T Consensus 158 ----~~~~i~~l~~~~~~L~~~-~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 158 ----HKDRVNDVCANGEDLIKK-NNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp ----HHHHHHHHHHHHHHHHHH-CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HHHHHHHHHHHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 578899999999999875 4567889999999999999999999999999998864
No 17
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.78 E-value=8.5e-18 Score=191.37 Aligned_cols=206 Identities=15% Similarity=0.189 Sum_probs=178.5
Q ss_pred hhhhhHHHHHhHHHHHHhHHHhhhhhcCCchhhhhHHHHHHHHHhhhhhhhhhhhhhccccccccccccccchHHHHHHH
Q psy4474 53 DHKLYNDVYVKTDDWLTGLEKDLDTLKNTTDVEAKNSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLR 132 (2174)
Q Consensus 53 ~~q~f~~~~~e~~~Wl~e~e~~l~~~~~~~~l~~~~~~~~~l~~e~~~~~~~l~~l~~~g~~l~~~~~~~~~~~i~~~l~ 132 (2174)
+.+.|...+.++..||.+++..+.+.+.|.| ...|+..+.
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~d----------------------------------------l~~v~~ll~ 43 (216)
T 1u5p_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDYGKD----------------------------------------LASVNNLLK 43 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCCCSS----------------------------------------HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCcccCCC----------------------------------------HHHHHHHHH
Confidence 4567999999999999999999976655554 334444455
Q ss_pred HHhhhhhhhhhhHHHhhhhhHHHHHHHhhccCCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 133 ALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQ--INKDQALEKAIVSVNKRYEDLVDGILKTISQLEESLDIFQQFQQ 210 (2174)
Q Consensus 133 ~l~~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~--~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~q~~~~ 210 (2174)
.+ +.|+.+|.+|+..|..+...|..|+. +++++.|..++..|+.+|..|...+..|..+|++++.+++
T Consensus 44 kh------~~le~~i~~~~~~v~~l~~~~~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l~q---- 113 (216)
T 1u5p_A 44 KH------QLLEADISAHEDRLKDLNSQADSLMTSSAFDTSQVKDKRETINGRFQRIKSMAAARRAKLNESHRLHQ---- 113 (216)
T ss_dssp HH------HHHHHHHHHHHHHHHHHHHHHHHHHTCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
T ss_pred HH------HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 54 78888888888888888888888875 6778899999999999999999999999999999999988
Q ss_pred hHHHHHHHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHH
Q psy4474 211 LQKAYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDAT 290 (2174)
Q Consensus 211 ~~k~~~~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~ 290 (2174)
|..+++++..||.+++..+.+ .++|.|+..++.++++|+.|+.+|.
T Consensus 114 ---------------------------------f~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~kh~~~~~el~ 159 (216)
T 1u5p_A 114 ---------------------------------FFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAELA 159 (216)
T ss_dssp ---------------------------------HHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred ---------------------------------HHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999987765 5678999999999999999999999
Q ss_pred HhHHhHHHHHHHHHHhcCCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 291 SHQQDLLQLKDKIESLHQPSEQS----KQQLATITTRHGNVLKRAQKFTEAYEGIV 342 (2174)
Q Consensus 291 ~~~~~v~~l~~~~~~L~~~~~~~----~~~~~~l~~r~~~L~~~~~~r~~~Le~~~ 342 (2174)
++.+.|..|...|..|+..+++. ..++..|..+|..|+..+..|...|+.++
T Consensus 160 ~~~~~i~~l~~~g~~L~~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 160 AHEPAIQGVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HhHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999998876543 67899999999999999999999998764
No 18
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.77 E-value=2.4e-17 Score=187.47 Aligned_cols=203 Identities=16% Similarity=0.201 Sum_probs=179.5
Q ss_pred hhHHHHHhHHHHHHhHHHhhhhhcCCchhhhhHHHHHHHHHhhhhhhhhhhhhhccccccccccccccchHHHHHHHHHh
Q psy4474 56 LYNDVYVKTDDWLTGLEKDLDTLKNTTDVEAKNSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALR 135 (2174)
Q Consensus 56 ~f~~~~~e~~~Wl~e~e~~l~~~~~~~~l~~~~~~~~~l~~e~~~~~~~l~~l~~~g~~l~~~~~~~~~~~i~~~l~~l~ 135 (2174)
.|..+++++..||.+++..+.+.+.|.| ...|+..+..+
T Consensus 4 qf~~~~~~~~~Wl~e~e~~l~~~~~g~d----------------------------------------l~~v~~ll~kh- 42 (213)
T 1cun_A 4 QFFRDMDDEESWIKEKKLLVSSEDYGRD----------------------------------------LTGVQNLRKKH- 42 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCCCSS----------------------------------------HHHHHHHHHHH-
T ss_pred HHHHHHHHHHhHHHHHHHHhcCcccCCC----------------------------------------HHHHHHHHHHH-
Confidence 4666699999999999999976655544 33444455554
Q ss_pred hhhhhhhhhHHHhhhhhHHHHHHHhhccCCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHH
Q psy4474 136 DSKCSKTTLQEVLSHKRIIESLLDKSKSLPQ--INKDQALEKAIVSVNKRYEDLVDGILKTISQLEESLDIFQQFQQLQK 213 (2174)
Q Consensus 136 ~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~--~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~q~~~~~~k 213 (2174)
+.|+.||.+|.+.|+.+...|..|+. ||+++.|..++..++.+|..|...+..|..+|++++.+++
T Consensus 43 -----~~~~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~~~------- 110 (213)
T 1cun_A 43 -----KRLEAELAAHEPAIQSVLDTGKKLSDDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLEYQQ------- 110 (213)
T ss_dssp -----HHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
T ss_pred -----HHHHHHHHHhHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------
Confidence 78899999999999999999999886 7899999999999999999999999999999999998877
Q ss_pred HHHHHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhH
Q psy4474 214 AYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQ 293 (2174)
Q Consensus 214 ~~~~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~ 293 (2174)
|..+++++..||.+++..+.+. ++|.|++.++.++++|+.|..+|.++.
T Consensus 111 ------------------------------f~~~~~e~~~Wl~~~e~~l~~~-~~g~~~~~v~~ll~~h~~~~~el~~~~ 159 (213)
T 1cun_A 111 ------------------------------FVANVEEEEAWINEKMTLVASE-DYGDTLAAIQGLLKKHEAFETDFTVHK 159 (213)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHHHHTCC-CCCSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------------------------------HHHHHHHHHHHHHHHHHHhhCC-CCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999988764 678899999999999999999999999
Q ss_pred HhHHHHHHHHHHhcCCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 294 QDLLQLKDKIESLHQPSEQS----KQQLATITTRHGNVLKRAQKFTEAYEGIV 342 (2174)
Q Consensus 294 ~~v~~l~~~~~~L~~~~~~~----~~~~~~l~~r~~~L~~~~~~r~~~Le~~~ 342 (2174)
+.|..|...|..|+..+++. ..++..|..+|..|+..+..|...|+++.
T Consensus 160 ~~i~~l~~~~~~L~~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 160 DRVNDVCANGEDLIKKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 99999999999998866543 57899999999999999999999998763
No 19
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.75 E-value=1.6e-17 Score=188.40 Aligned_cols=204 Identities=13% Similarity=0.153 Sum_probs=162.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHH-hHHhHHHHHHHHHHhcCCChHH----HHHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATS-HQQDLLQLKDKIESLHQPSEQS----KQQL 317 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~-~~~~v~~l~~~~~~L~~~~~~~----~~~~ 317 (2174)
.|.+.++++..||.+++..+.+ .++|.|++.++.++++|+.|..++.+ +.++|..++..|..|+..+||. ..++
T Consensus 5 ~f~~~~~~l~~Wl~~ke~~l~~-~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~~~~~~~i~~~~ 83 (218)
T 3edu_A 5 QLKRETDDLEQWISEKELVASS-PEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAGHSEAATIAEWK 83 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcc-cccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcCCCCHHHHHHHH
Confidence 3999999999999999999887 46789999999999999999999998 8999999999999999877654 6788
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhh
Q psy4474 318 ATITTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIG 397 (2174)
Q Consensus 318 ~~l~~r~~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~ 397 (2174)
..|+.+|..|...+..|...|+.+. .++.|...++++..||.++...+. .++|.|+.+++.++++|+.|+.+|..+.
T Consensus 84 ~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~e~~~Wl~ek~~~l~--~~~g~dl~~v~~l~~~h~~~e~dL~~~~ 160 (218)
T 3edu_A 84 DGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERELHLLG 160 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC---------------CCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCC--CccCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999996 678899999999999999999994 6788999999999999999999999999
Q ss_pred hhHHHHhh--hhhhccCc-cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 398 HKTVALKN--NVLESTGP-IGKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSI 450 (2174)
Q Consensus 398 ~~~~~l~~--~~l~~~~~-~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~ 450 (2174)
..+..+.. ..+...+| +.+..|..++..|..+|+.|...+..|...|+.+...
T Consensus 161 ~~v~~l~~~a~~L~~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 216 (218)
T 3edu_A 161 VQVQQFQDVATRLQTAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216 (218)
T ss_dssp HHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHHHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99988874 33444444 3578999999999999999999999999999998753
No 20
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.74 E-value=5.9e-17 Score=184.05 Aligned_cols=207 Identities=14% Similarity=0.172 Sum_probs=189.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhccccCC-CCcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC---CcchHHH
Q psy4474 452 NDFLSSKNTLEKWIEGFQKKIEAEKDIGD-CTNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH---SPIREET 527 (2174)
Q Consensus 452 ~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~-~~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~---~~i~~~~ 527 (2174)
+.|...+.++..||.+++..+.+.+++++ ..+..++.+|+.+..+|..+++.|..+...|..|+..+++ +.|+..+
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l 82 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRL 82 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 47999999999999999999988666654 3478999999999999999999999999999999987543 4688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHhccccCh
Q psy4474 528 LRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQH 607 (2174)
Q Consensus 528 ~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~el~~~~~ 607 (2174)
..|...|..|...+..|..+|++++. ++.|..++.++..||...+..+.+.+.|.|+.+++.++++|+.|..++.++..
T Consensus 83 ~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~~~~ 161 (214)
T 1s35_A 83 EGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMENNRD 161 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999999998875 77899999999999999999998877889999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 608 LMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYI 660 (2174)
Q Consensus 608 ~l~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~ 660 (2174)
.+..+...|..|+..+++ ..+.|..++..|..+|..|...+..|...|++++
T Consensus 162 ~i~~l~~~a~~L~~~~h~-~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 162 KVLSPVDSGNKLVAEGNL-YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999998775 4667999999999999999999999999998764
No 21
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.73 E-value=1.2e-16 Score=181.35 Aligned_cols=205 Identities=8% Similarity=0.094 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHH
Q psy4474 1374 NEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENI 1453 (2174)
Q Consensus 1374 ~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i 1453 (2174)
..++.|...+.++..||.+++..+++. ++|.|+..++.++.+|+.|+.+|..+.+.|..+...|..|+..++| ..+.|
T Consensus 13 ~~~~~F~~~~~~l~~Wl~~~~~~l~~~-e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~-~~~~i 90 (218)
T 3fb2_A 13 HDLQRFLSDFRDLMSWINGIRGLVSSD-ELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHY-ASPEI 90 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCC-CCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCT-THHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCC-chHHH
Confidence 456789999999999999999999874 7789999999999999999999999999999999999999988776 47889
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCC-CCchHhHHHHHHHHHhhh
Q psy4474 1454 NQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGD-CTNLDDLEKYKALLQEGL 1532 (2174)
Q Consensus 1454 ~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~-~~~~~~l~k~~~l~~ei~ 1532 (2174)
+.++..|+.+|+.|...+..|+..|+.++. ++.|..++.++..||...|..|...+.+++ ......+.+|+.|..++.
T Consensus 91 ~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l~ 169 (218)
T 3fb2_A 91 KQKLDILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAIN 169 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 799999999999999999999988544333 233467899999999998
Q ss_pred hhhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHH
Q psy4474 1533 HKEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEI 1587 (2174)
Q Consensus 1533 ~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~ 1587 (2174)
+ +...|..+...|..|+.. +++++..|..++..|+.||+.|...+.+|+
T Consensus 170 ~-----~~~~v~~l~~~~~~L~~~-~h~~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 170 V-----QEEKIAALQAFADQLIAA-GHYAKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp H-----HHHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred h-----hHHHHHHHHHHHHHHHHc-CCCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 8 577899999999999875 557788999999999999999999887764
No 22
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.73 E-value=1.3e-16 Score=185.05 Aligned_cols=226 Identities=11% Similarity=0.134 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHh
Q psy4474 1364 EAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLE 1443 (2174)
Q Consensus 1364 ~R~~~L~~a~~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~ 1443 (2174)
.|..+|+.. +.+|...+.++..||.+++..+.+..++|.|++.|+.++++|+.|+.+|..++++|..|...|..|+.
T Consensus 7 ~R~~kLe~l---~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~ 83 (250)
T 1quu_A 7 RRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE 83 (250)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 356666665 67899999999999999999999865559999999999999999999999999999999999999998
Q ss_pred hcChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhhccCCCCC-
Q psy4474 1444 STGPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKCLSLWN-------DFLSSKNTLEKWIEGFQKKIESEKDIGDC- 1515 (2174)
Q Consensus 1444 ~~~~~~~~~i~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~-------~f~~~~~~l~~WL~~~e~~L~~~~~~~~~- 1515 (2174)
.+++ +.+.|..++..|+.+|+.|...+..|+..|++++...+ +|...++++..||.+++..|.....+++.
T Consensus 84 ~~~~-~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e 162 (250)
T 1quu_A 84 LDYH-DAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIE 162 (250)
T ss_dssp TTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCSTT
T ss_pred ccCc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCCHH
Confidence 8765 57889999999999999999999999999999998654 99999999999999999999886544433
Q ss_pred CchHhHHHHHHHHHhhhhhhchhhHHHHHhhhhhhhhhcccCChH---HHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1516 TNLDDLEKYKALLQEGLHKEADNKKVLIDSFNKGIIGMTELESEE---VKDLIQVGVHGLQVELNALLQNIEAEINKVAN 1592 (2174)
Q Consensus 1516 ~~~~~l~k~~~l~~ei~~~~~~~~~~~~~~l~~~~~~l~~~~~~~---~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~ 1592 (2174)
+....+.+|+.|..++..... ....+..+...+..+....++. +.+.|..++..|..+|..|+..+..|...|++
T Consensus 163 ~v~~ll~~h~~~~~~l~~~~~--~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~ 240 (250)
T 1quu_A 163 EIQSLITAHEQFKATLPEADG--ERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQE 240 (250)
T ss_dssp THHHHHHHHHHHHTHHHHHHH--HHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333678899999976655321 2344555555555555433321 33457788999999999999999999999999
Q ss_pred HHH
Q psy4474 1593 AAQ 1595 (2174)
Q Consensus 1593 ~~~ 1595 (2174)
++.
T Consensus 241 ~l~ 243 (250)
T 1quu_A 241 ELA 243 (250)
T ss_dssp HHH
T ss_pred HHH
Confidence 876
No 23
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.72 E-value=3.4e-16 Score=181.62 Aligned_cols=207 Identities=14% Similarity=0.209 Sum_probs=180.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChHH----HHHHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQS----KQQLA 318 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~~----~~~~~ 318 (2174)
.|...++++.+||.+++..+.+.+++|.|++.|+.++++|+.|+.+|.++.++|+.|...|..|+..+++. ..++.
T Consensus 18 ~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~I~~r~~ 97 (250)
T 1quu_A 18 KFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELDYHDAVNVNDRCQ 97 (250)
T ss_dssp HHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHH
Confidence 49999999999999999999986665999999999999999999999999999999999999999877653 56899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHH
Q psy4474 319 TITTRHGNVLKRAQKFTEAYEGIVSIHQ-------AYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEK 391 (2174)
Q Consensus 319 ~l~~r~~~L~~~~~~r~~~Le~~~~~~~-------~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~ 391 (2174)
.|+.+|..|+..+..|...|++++..++ .|...++++..||.+++..+.+. +++.++++++.++++|+.|..
T Consensus 98 ~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~-~~~~d~e~v~~ll~~h~~~~~ 176 (250)
T 1quu_A 98 KICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDM-FIVHSIEEIQSLITAHEQFKA 176 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC-CCCCSTTTHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccc-cccCCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999998886 99999999999999999999886 478899999999999999998
Q ss_pred HHhhhhhhHHHH---hh---hhhhccCcc---ccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 392 ELGRIGHKTVAL---KN---NVLESTGPI---GKENINQEINQITLDWTNLQNTLQVIDKHHAKCLSI 450 (2174)
Q Consensus 392 ~l~~~~~~~~~l---~~---~~l~~~~~~---~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~ 450 (2174)
++..+...+..+ +. .++...++. +.+.|..++..|..+|+.|...+..|...|+.++..
T Consensus 177 ~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~ 244 (250)
T 1quu_A 177 TLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELAR 244 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888776544433 32 222233322 556688899999999999999999999999998754
No 24
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.68 E-value=9.4e-16 Score=171.20 Aligned_cols=196 Identities=14% Similarity=0.198 Sum_probs=173.3
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChH-HHHHHHHHHH
Q psy4474 244 YEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQ-SKQQLATITT 322 (2174)
Q Consensus 244 f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~-~~~~~~~l~~ 322 (2174)
.++.++++.+||.+++..+.+ .++|.|+..++.++++|+.|+.+|.++.+.|..+...|..|...+++ ...++..|..
T Consensus 10 ~~r~~~dl~~Wl~e~~~~l~s-~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~~~~~~i~~rl~~l~~ 88 (210)
T 3pdy_A 10 TLRYLQDLLAWVEENQHRVDG-AEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSPATRGAYRDCLGRLDL 88 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchHHHHHHHHHHHH
Confidence 589999999999999998887 56789999999999999999999999999999999999888543322 3678999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhhhHHH
Q psy4474 323 RHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGHKTVA 402 (2174)
Q Consensus 323 r~~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~~~ 402 (2174)
+|..|+..+..|...|+ .+..|...+.++..||.+++..+.+ .++|.++.++..++++|+.|+.+|.....++..
T Consensus 89 ~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~~~Wl~eke~~~~s-~d~g~~~~~v~~l~~k~~~f~~el~~~~~~v~~ 163 (210)
T 3pdy_A 89 QYAKLLNSSKARLRSLE----SLHSFVAAATKELMWLNEKEEEEVG-FDWSDRNTNMTAKKESYSALMRELELKEKKIKE 163 (210)
T ss_dssp HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHH-SCCSTTSCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHc-cccCCCchhHHHHHHHHHHHHHHHHHhHHHHHH
Confidence 99999999999999999 3578999999999999999999887 467788899999999999999999999888887
Q ss_pred Hhh--hhhhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 403 LKN--NVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHA 445 (2174)
Q Consensus 403 l~~--~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le 445 (2174)
+.. ..+...++++++.|..+++.|+.+|+.|...+.-+...|.
T Consensus 164 l~~~~~~Ll~~~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk 208 (210)
T 3pdy_A 164 LQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLK 208 (210)
T ss_dssp HHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 773 4455567888999999999999999999999988877664
No 25
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.67 E-value=1.4e-15 Score=172.51 Aligned_cols=201 Identities=15% Similarity=0.191 Sum_probs=163.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhccccCCC-CcHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcchHHH
Q psy4474 451 WNDFLSSKNTLEKWIEGFQKKIEAEKDIGDC-TNLDDLEKYKALLQEVISHNSDMETLNDKCEALMELAAH--SPIREET 527 (2174)
Q Consensus 451 ~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~-~~~~~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~--~~i~~~~ 527 (2174)
+..|...+.++..||.+++..+.+.+.|++. .+..+|.+|+.+..+|.++.+.|..+...|..|+..+++ +.|+..+
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~~~~~~~i~~~l 94 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHGHYASPEIKQKL 94 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTTCTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCchHHHHHHH
Confidence 4689999999999999999999886666554 478999999999999999999999999999999998766 5689999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHhccccCh
Q psy4474 528 LRLQALYAALVTSVQGLVSQVEKNLSDQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQH 607 (2174)
Q Consensus 528 ~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~el~~~~~ 607 (2174)
..|...|..|...+..|..+|++++. ++.|.+++..+..||...+..+.+.+.|.+++.++.++++|+.|..++.....
T Consensus 95 ~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l~~~~~ 173 (218)
T 3fb2_A 95 DILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQEE 173 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhhHH
Confidence 99999999999999999999998874 57899999999999999999888877788999999999999999999999999
Q ss_pred hHHHHHHHHHHHhccCCCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 608 LMSVLQDTFTKALDTTPSDQQDSLREAMTVLRDSWDRLNRDLKSTS 653 (2174)
Q Consensus 608 ~l~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~ 653 (2174)
.+..+...|..|+..+++ +.+.|..++..|..+|+.|...+..|+
T Consensus 174 ~v~~l~~~~~~L~~~~h~-~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 174 KIAALQAFADQLIAAGHY-AKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHHHHHHHHHHTTCT-THHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HHHHHHHHHHHHHHcCCC-CHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999988765 466899999999999999999887764
No 26
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.65 E-value=5.1e-16 Score=176.06 Aligned_cols=195 Identities=10% Similarity=0.163 Sum_probs=144.4
Q ss_pred hHHHHHhHHHHHHhHHHhhhhhcCCchhhhhHHHHHHHHHhhhhhhhhhhhhhccccccccccccccchHHHHHHHHHhh
Q psy4474 57 YNDVYVKTDDWLTGLEKDLDTLKNTTDVEAKNSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALRD 136 (2174)
Q Consensus 57 f~~~~~e~~~Wl~e~e~~l~~~~~~~~l~~~~~~~~~l~~e~~~~~~~l~~l~~~g~~l~~~~~~~~~~~i~~~l~~l~~ 136 (2174)
|...+.++.+||.+++..+.+.+.|+|+.+ |+..+..+
T Consensus 25 ~~~~~~~l~~Wl~e~e~~l~s~d~g~Dl~~----------------------------------------v~~ll~kh-- 62 (224)
T 2iak_A 25 NMKFVQDLLNWVDEMQVQLDRTEWGSDLPS----------------------------------------VESHLENH-- 62 (224)
T ss_dssp HC-CHHHHHHHHHHHHHHHHTCCCCSSHHH----------------------------------------HHHHHHHH--
T ss_pred HHHHHHHHHHHHHHHHHHhhccccCCCHHH----------------------------------------HHHHHHHH--
Confidence 333488999999999999988777766433 33344444
Q ss_pred hhhhhhhhHHHhhhhhHHHHHHHhhccCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHH
Q psy4474 137 SKCSKTTLQEVLSHKRIIESLLDKSKSLPQINKDQALEKAIVSVNKRYEDLVDGILKTISQLEESLDIFQQFQQLQKAYQ 216 (2174)
Q Consensus 137 ~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L~~~~~~~q~~~~~~k~~~ 216 (2174)
+.|+.+|.+|.+.|..+...+..+.. +.+..|..++..|..+|..|...+..|...|+ .+++
T Consensus 63 ----~~~e~ei~~~~~~v~~~~~~~~~~~~-~~~~~i~~~~~~l~~~~~~L~~~~~~R~~~Le---~l~~---------- 124 (224)
T 2iak_A 63 ----KNVHRAIEEFESSLKEAKISEIQMTA-PLKLSYTDKLHRLESQYAKLLNTSRNQERHLD---TLHN---------- 124 (224)
T ss_dssp ----HHHHHHHHHTHHHHHHHHHHGGGCCT-THHHHHHHHHHHHHHHHHHTTTHHHHHHHHHH---HHHH----------
T ss_pred ----HHHHHHHHHHHHHHHHHHHHHHhccc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH----------
Confidence 67777777777777777666665554 45677889999999999999999999999999 6777
Q ss_pred HHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhH
Q psy4474 217 EDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDL 296 (2174)
Q Consensus 217 ~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v 296 (2174)
|..+++++..||.+++..+.+ .++|.++..++.++++|+.|..+|.+|+++|
T Consensus 125 ---------------------------F~~~~~~~~~Wi~eke~~~~s-~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v 176 (224)
T 2iak_A 125 ---------------------------FVTRATNELIWLNEKEESEVA-YDWSERNSSVARKKSYHAELMRELEQKEESI 176 (224)
T ss_dssp ---------------------------HHHHHHHHHHHHHHHHHHHCC-C---------------CSSHHHHHHHHHHHH
T ss_pred ---------------------------HHHHHHHHHHHHHHHHHHHhc-cccCCCchhHHHHHHHHHHHHHHHHHhhHHH
Confidence 999999999999999998876 5678899999999999999999999999999
Q ss_pred HHHHHHHHHhcCCChHH----HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 297 LQLKDKIESLHQPSEQS----KQQLATITTRHGNVLKRAQKFTEAYE 339 (2174)
Q Consensus 297 ~~l~~~~~~L~~~~~~~----~~~~~~l~~r~~~L~~~~~~r~~~Le 339 (2174)
+.|...|..|+..++|. ..++..|..+|..|...+..|...|+
T Consensus 177 ~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 177 KAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999877654 56899999999999999999988875
No 27
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.65 E-value=4.6e-15 Score=165.62 Aligned_cols=199 Identities=12% Similarity=0.130 Sum_probs=173.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHHHHH
Q psy4474 1379 YKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEIN 1458 (2174)
Q Consensus 1379 f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~~l~ 1458 (2174)
..+.++++..||.++...+++ .++|.|+.+|+.++++|+.|+.+|..+++.|..+...+..+.+ .+...|..++.
T Consensus 10 ~~r~~~dl~~Wl~e~~~~l~s-~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~----~~~~~i~~rl~ 84 (210)
T 3pdy_A 10 TLRYLQDLLAWVEENQHRVDG-AEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSP----ATRGAYRDCLG 84 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH-CCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCH----HHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHhcc-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc----cchHHHHHHHH
Confidence 356788999999999999887 5889999999999999999999999999999999988877643 33456999999
Q ss_pred HHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCch-HhHHHHHHHHHhhhhhhch
Q psy4474 1459 QITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNL-DDLEKYKALLQEGLHKEAD 1537 (2174)
Q Consensus 1459 ~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~~~-~~l~k~~~l~~ei~~~~~~ 1537 (2174)
.|..+|..|...+..|+..|+ .++.|...+.++..||.++|..+.+...+++.... ..+.+|..|..++..
T Consensus 85 ~l~~~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~---- 156 (210)
T 3pdy_A 85 RLDLQYAKLLNSSKARLRSLE----SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELEL---- 156 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHH----
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHH----
Confidence 999999999999999999999 36899999999999999999999987766665555 456799999999988
Q ss_pred hhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1538 NKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEINKVAN 1592 (2174)
Q Consensus 1538 ~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~~L~~ 1592 (2174)
+++.|..++..|..|+.. +|+.+..|..+.+.|+.+|+.|...+.-+...|.+
T Consensus 157 -~~~~v~~l~~~~~~Ll~~-~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 157 -KEKKIKELQNAGDRLLRE-DHPARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp -HHHHHHHHHHHHHHHHHT-TCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred -hHHHHHHHHHHHHHHHHc-CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 678899999999999875 56788899999999999999999999887766543
No 28
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.63 E-value=1.7e-15 Score=171.83 Aligned_cols=198 Identities=13% Similarity=0.179 Sum_probs=152.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCC-hHHHHHHHHH
Q psy4474 242 CGYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPS-EQSKQQLATI 320 (2174)
Q Consensus 242 ~~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~-~~~~~~~~~l 320 (2174)
..|.+.++++..||.+++..+.+. ++|.|+..|+.++++|+.|+.+|.++.++|..+...+..+.... +....++..|
T Consensus 23 ~~~~~~~~~l~~Wl~e~e~~l~s~-d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~~~~~~~i~~~~~~l 101 (224)
T 2iak_A 23 EVNMKFVQDLLNWVDEMQVQLDRT-EWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMTAPLKLSYTDKLHRL 101 (224)
T ss_dssp HHHC-CHHHHHHHHHHHHHHHHTC-CCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCCTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcc-ccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHH
Confidence 346666999999999999999875 57899999999999999999999999999999987776665411 1226789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhhhhhH
Q psy4474 321 TTRHGNVLKRAQKFTEAYEGIVSIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRIGHKT 400 (2174)
Q Consensus 321 ~~r~~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~~~~~ 400 (2174)
..+|..|+..+..|...|+ .+..|...++++..||.+++..+.+ .++|.++..++.++++|+.|+.+|..++..+
T Consensus 102 ~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s-~d~g~~l~~v~~L~~kh~~l~~el~~~~~~v 176 (224)
T 2iak_A 102 ESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVA-YDWSERNSSVARKKSYHAELMRELEQKEESI 176 (224)
T ss_dssp HHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCC-C---------------CSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhc-cccCCCchhHHHHHHHHHHHHHHHHHhhHHH
Confidence 9999999999999999998 5678999999999999999999876 5788999999999999999999999998888
Q ss_pred HHHhh--hhhhccCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 401 VALKN--NVLESTGPIGKENINQEINQITLDWTNLQNTLQVIDKHHA 445 (2174)
Q Consensus 401 ~~l~~--~~l~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le 445 (2174)
..+.. ..+...+++++..|..+++.|..+|+.|...+..|...|+
T Consensus 177 ~~v~~~g~~L~~~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 177 KAVQEIAEQLLLENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp HHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 77762 4455566778888999999999999999999999988876
No 29
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.60 E-value=5.8e-15 Score=170.68 Aligned_cols=180 Identities=14% Similarity=0.115 Sum_probs=142.0
Q ss_pred HHHhHhhhHhhhhhHHHHHhHHHHHHhHHHhhhhhcCCch---hhhhHHHHHHHHHhhhhhhhhhhhhhccccccccccc
Q psy4474 44 INRWQGLVYDHKLYNDVYVKTDDWLTGLEKDLDTLKNTTD---VEAKNSLLQKLLTEKDQAGHKLTYLTSSGEKLYLDTA 120 (2174)
Q Consensus 44 ~~~L~~~~~~~q~f~~~~~e~~~Wl~e~e~~l~~~~~~~~---l~~~~~~~~~l~~e~~~~~~~l~~l~~~g~~l~~~~~ 120 (2174)
+.+|.++...|+||++ |++.+.||.+++......+.++. +.+++++|
T Consensus 1 ~~rL~~l~~L~qF~~d-~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh----------------------------- 50 (283)
T 3pe0_A 1 GSHMRSLESLHSFVAA-ATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESY----------------------------- 50 (283)
T ss_dssp ------CHHHHHHHHH-HHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHH-----------------------------
T ss_pred ChhHHHHHHHHHHHHH-HHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHH-----------------------------
Confidence 3578888877775555 99999999999999655554432 33333333
Q ss_pred cccchHHHHHHHHHhhhhhhhhhhHHHhhhhhHHHHHHHhhccCCC--cchhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 121 AKGREVVRQQLRALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQ--INKDQALEKAIVSVNKRYEDLVDGILKTISQL 198 (2174)
Q Consensus 121 ~~~~~~i~~~l~~l~~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~--~~~~~~i~~~~~~l~~r~~~l~~~~~~r~~~L 198 (2174)
++|+.||.+|+..|+.|...|..|+. ||+++.|+.+++.|+..|..|...|..|...|
T Consensus 51 --------------------~~le~El~a~e~~v~~v~~~g~~L~~~~hp~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L 110 (283)
T 3pe0_A 51 --------------------SALMRELELKEKKIKELQNAGDRLLREDHPARPTVESFQAALQTQWSWMLQLCCCIEAHL 110 (283)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHHHHHHSCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------------------HHHHHHHHHhHHHHHHHHHHHHHHHHcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666666666666666666654 67788888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHH---HHHhhhccccccCCCHHHH
Q psy4474 199 EESLDIFQQFQQLQKAYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLK---VTEKKLGDEMELKTTLDEK 275 (2174)
Q Consensus 199 ~~~~~~~q~~~~~~k~~~~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~---e~e~~l~~~~~~~~d~~~~ 275 (2174)
+++..++| |+.+++++.+||. +.+..+.+ .++|.|+..+
T Consensus 111 ~~a~~~~q-------------------------------------F~~da~e~e~Wl~~~~e~~~~~~s-~d~g~d~~s~ 152 (283)
T 3pe0_A 111 KENAAYFQ-------------------------------------FFSDVREAEGQLQKLQEALRRKYS-CDRSATVTRL 152 (283)
T ss_dssp HHHHHHHH-------------------------------------HHHHHHHHHHHHHHHHHHHHHHHH-SCCCSHHHHH
T ss_pred HHHHHHHH-------------------------------------HHHHHHHHHHHHHHHHHHHHHhcC-CccCCCHHHH
Confidence 99999999 9999999999887 66655555 5678999999
Q ss_pred HHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCCh
Q psy4474 276 KAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSE 311 (2174)
Q Consensus 276 ~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~ 311 (2174)
+.++++|+.|+.+|.++...|..|...|..|....+
T Consensus 153 ~~LLkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~~ 188 (283)
T 3pe0_A 153 EDLLQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP 188 (283)
T ss_dssp HHHTCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999999999987544
No 30
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.52 E-value=1.9e-13 Score=149.53 Aligned_cols=160 Identities=12% Similarity=0.148 Sum_probs=146.4
Q ss_pred HHHHHHHHHHHHHHHHHHhh------hcCCHHHHHHHHHHHHHHHhhchhhhhHHHHHHHHHHhhcccCCCCCchHHHHH
Q psy4474 1597 RKAMQDKISKLQSWLKQYID------YSGNKQALQSRLDKVNEIQESFPEISTKLQTLSDHIENSSRKLPSRTNEAMYRD 1670 (2174)
Q Consensus 1597 ~~~f~~~~~~l~~wl~~~e~------~~~d~~~~~~~l~k~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~ 1670 (2174)
++.|..++.++..||.++.. .+.|+..++.++.+|+.|..+|.++.+.+..+...|..|+.. +++.+..|..+
T Consensus 6 l~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~-~~~~~~~i~~~ 84 (185)
T 3lbx_B 6 KFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQR-QHQASEEIREK 84 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TCTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhc-CCCcHHHHHHH
Confidence 67899999999999999754 467899999999999999999999999999999999999985 56777889999
Q ss_pred HHHHHHHHHHHHhhHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCChhhHhhHHHHHhhhccccchHH
Q psy4474 1671 LANLRYDFEKCVSSLSDVKQGLESRLVQWNEYETSLGKLITWLNDTENVLKNFTLQPTLNEKKQQRELKGKLSSWCGYEE 1750 (2174)
Q Consensus 1671 l~~l~~~w~~L~~~~~~r~~~L~~~~~~~~~f~~~~~~l~~Wl~~~e~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 1750 (2174)
+..|..+|+.|...+..|+.+|++++ .++.|..+++.+..||...+..|.+
T Consensus 85 l~~L~~~w~~L~~~w~~r~~~L~~~l-~l~~F~~d~~~~~~Wl~~~e~~L~~---------------------------- 135 (185)
T 3lbx_B 85 LQQVMSRRKEMNEKWEARWERLRMLL-EVCQFSRDASVAEAWLIAQEPYLAS---------------------------- 135 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHC----------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHhHHHHHHHHHHhHhhhcc----------------------------
Confidence 99999999999999999999999998 6789999999999999999998865
Q ss_pred HHHHHHHHHHHHHhhccccccccccHHHHHHHHHHHHHHHHhhHHhHHHHHHHHH
Q psy4474 1751 SVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKD 1805 (2174)
Q Consensus 1751 ~~~~~~~wl~~~e~~l~~~~~~~~~~~~v~~~l~~~~~~~~~l~~~~~~~~~l~~ 1805 (2174)
.++|.+++.|+.++++|+.|+.++.++.++|..|..
T Consensus 136 -------------------~~~g~sl~~ve~LlkkH~~fe~~l~~~~e~i~~L~~ 171 (185)
T 3lbx_B 136 -------------------GDFGHTVDSVEKLIKRHEAFEKSTASWAERFAALEK 171 (185)
T ss_dssp -------------------CCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHS
T ss_pred -------------------CCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhh
Confidence 478899999999999999999999999999988865
No 31
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.51 E-value=2.7e-13 Score=148.40 Aligned_cols=167 Identities=9% Similarity=0.102 Sum_probs=145.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHH
Q psy4474 1374 NEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENI 1453 (2174)
Q Consensus 1374 ~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i 1453 (2174)
..++.|...+.++..||.+++..+++. ++|.|+..++.++.+|+.|+.+|..+++.|..+...|..|+..++| ..+.|
T Consensus 4 ~dl~~F~~~~~dl~~Wl~~~~~~l~~~-e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~~~-~~~~i 81 (185)
T 3lbx_B 4 ADKFRFFSMARDLLSWMESIIRQIETQ-ERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQHQ-ASEEI 81 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHS-CC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCT-THHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC-cCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCC-cHHHH
Confidence 356789999999999999999999875 5688999999999999999999999999999999999999988876 47889
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCC-CchHhHHHHHHHHHhhh
Q psy4474 1454 NQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDFLSSKNTLEKWIEGFQKKIESEKDIGDC-TNLDDLEKYKALLQEGL 1532 (2174)
Q Consensus 1454 ~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~-~~~~~l~k~~~l~~ei~ 1532 (2174)
..++..|+.+|+.|...+..|+..|+.++. ++.|..++.++..||...|..|.....+++. .....+++|+.|..++.
T Consensus 82 ~~~l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl~~ve~LlkkH~~fe~~l~ 160 (185)
T 3lbx_B 82 REKLQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTA 160 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 8899999999999999999999875433322 23367899999999998
Q ss_pred hhhchhhHHHHHhhhh
Q psy4474 1533 HKEADNKKVLIDSFNK 1548 (2174)
Q Consensus 1533 ~~~~~~~~~~~~~l~~ 1548 (2174)
+ +...|..|..
T Consensus 161 ~-----~~e~i~~L~~ 171 (185)
T 3lbx_B 161 S-----WAERFAALEK 171 (185)
T ss_dssp H-----THHHHHHHHS
T ss_pred H-----hHHHHHHHhh
Confidence 8 5666776653
No 32
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.48 E-value=2.6e-13 Score=143.18 Aligned_cols=138 Identities=11% Similarity=0.157 Sum_probs=129.0
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHH
Q psy4474 911 EEGSPIKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQ 990 (2174)
Q Consensus 911 ~~~~~i~~~l~~L~~~~~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~ 990 (2174)
+.+..|..++..|..+|..|...+..|..+|++++ .+..|..+++++..||.+++..+.++++ .||..++.++++|+.
T Consensus 22 e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~~~~-~d~~~v~~ll~kH~a 99 (161)
T 3lbx_A 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTDKSY-EDPTNIQGKYQKHQS 99 (161)
T ss_dssp CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSC-CSCCCHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCc-CCHHHHHHHHHHHHH
Confidence 45678999999999999999999999999999998 6779999999999999999998776655 799999999999999
Q ss_pred HHHHHHHhhhhHHhHhhhhhhh-ccChhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 991 LNEEAGELNMMISNVSIATEHM-NLNDADRLTVNDSVSSMQKRYAQLSRTIEDRISTVNNK 1050 (2174)
Q Consensus 991 l~~ei~~~~~~v~~l~~~~~~L-~~~~~~~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le~~ 1050 (2174)
|+.++.++.+.+..|...|+.| ..+|+++..|..++..|+.+|+.|...+..|..+|+++
T Consensus 100 fe~El~a~~~~~~~l~~~g~~Li~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eA 160 (161)
T 3lbx_A 100 LEAEVQTKSRLMSELEKTREERFTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999988 67888999999999999999999999999999999876
No 33
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.45 E-value=7.1e-13 Score=139.79 Aligned_cols=136 Identities=13% Similarity=0.224 Sum_probs=124.6
Q ss_pred HHhhhhhchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHh
Q psy4474 1342 ELATKEVQPYVQRYETLKKNIAEAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQIT 1421 (2174)
Q Consensus 1342 ~~~~~~l~~l~~~w~~L~~~~~~R~~~L~~a~~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~ 1421 (2174)
..|..++..|+.+|+.|...+..|..+|++++ .++.|..+++++..||.+++..+.+. ++ .|+.+|..++.+|+.|+
T Consensus 25 ~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~~-~~-~d~~~v~~ll~kH~afe 101 (161)
T 3lbx_A 25 EEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTDK-SY-EDPTNIQGKYQKHQSLE 101 (161)
T ss_dssp TTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTT-SC-CSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCC-Cc-CCHHHHHHHHHHHHHHH
Confidence 35677888899999999999999999999997 67799999999999999998876553 44 79999999999999999
Q ss_pred hcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Q psy4474 1422 KSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKC 1481 (2174)
Q Consensus 1422 ~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~~l~~L~~~W~~L~~~~~~r~~~Le~~ 1481 (2174)
++|.++.+.|..|...|..|+..+++ ..+.|+.++..|+.+|+.|...+..|...|++|
T Consensus 102 ~El~a~~~~~~~l~~~g~~Li~~~~~-~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eA 160 (161)
T 3lbx_A 102 AEVQTKSRLMSELEKTREERFTMGHS-AHEETKAHIEELRHLWDLLLELTLEKGDQLLRA 160 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSCTTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999988765 689999999999999999999999999999886
No 34
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.45 E-value=9.1e-13 Score=152.36 Aligned_cols=185 Identities=14% Similarity=0.125 Sum_probs=155.6
Q ss_pred HHHHHHHHHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHHHHHHHHHhhhhHHhHhhhhhhh-ccChhc
Q psy4474 940 TLNQLIGHRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHM-NLNDAD 1018 (2174)
Q Consensus 940 ~L~~~~~~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~l~~ei~~~~~~v~~l~~~~~~L-~~~~~~ 1018 (2174)
+|.++.. ..+|..++++.+.||.+.++...+.+.+.....+...+++|+.|+.++.+|++.|..|...|+.| ..+||+
T Consensus 3 rL~~l~~-L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~hp~ 81 (283)
T 3pe0_A 3 HMRSLES-LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLREDHPA 81 (283)
T ss_dssp ----CHH-HHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCTT
T ss_pred hHHHHHH-HHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCC
Confidence 4555554 44788899999999999999976666655444588899999999999999999999999999988 778999
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCChHHHHHHHHHHHHHHH
Q psy4474 1019 RLTVNDSVSSMQKRYAQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLARPVSTQAEDISEALTVYQKLLD 1098 (2174)
Q Consensus 1019 ~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le~~l~~~~~f~~~~~~~~~wl~~~e~~l~~~~~~~~~~~~~~l~~~~~l~~ 1098 (2174)
+..|..+++.|...|+.|...+..|...|+++.. +++|..+++++..||..++..+..
T Consensus 82 ~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~qF~~da~e~e~Wl~~~~e~~~~--------------------- 139 (283)
T 3pe0_A 82 RPTVESFQAALQTQWSWMLQLCCCIEAHLKENAA-YFQFFSDVREAEGQLQKLQEALRR--------------------- 139 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH---------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHH---------------------
Confidence 9999999999999999999999999999999876 677889999999999754432100
Q ss_pred HHHhhcCCCChhhHHHHHHHhhcHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCchhHHHH
Q psy4474 1099 EINSWKNSQSDEDLVHLADSIKPLDEVVERIENHAVPKLKSLLLLREQFTTLIMQIVGFITETTARVGEVDGNSATVQEK 1178 (2174)
Q Consensus 1099 el~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~L~~~~~~~~~f~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~ 1178 (2174)
-...++|.|+.+++.+
T Consensus 140 ----------------------------------------------------------------~~s~d~g~d~~s~~~L 155 (283)
T 3pe0_A 140 ----------------------------------------------------------------KYSCDRSATVTRLEDL 155 (283)
T ss_dssp ----------------------------------------------------------------HHHSCCCSHHHHHHHH
T ss_pred ----------------------------------------------------------------hcCCccCCCHHHHHHH
Confidence 0124689999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhhccccccCCC
Q psy4474 1179 IDKYDKIIADIQEYEAILATASDKGDQLSSDGT 1211 (2174)
Q Consensus 1179 l~~~~~l~~el~~~~~~l~~~~~~~~~L~~~~~ 1211 (2174)
+++|+.+..+|..+...+..+...++.|+..++
T Consensus 156 Lkkh~~le~~l~~~~~~i~~L~~~a~~l~~l~~ 188 (283)
T 3pe0_A 156 LQDAQDEKEQLNEYKGHLSGLAKRAKAVVQLKP 188 (283)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHTTCCCCGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999999999999987544
No 35
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.39 E-value=2.4e-12 Score=134.27 Aligned_cols=136 Identities=13% Similarity=0.107 Sum_probs=125.8
Q ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHH
Q psy4474 911 EEGSPIKDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQ 990 (2174)
Q Consensus 911 ~~~~~i~~~l~~L~~~~~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~ 990 (2174)
+.+..|..++..|..+|..|+..+..|..+|++++. +..|..+++++..||.+++..+.+++ +.|+..++.++.+|+.
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~~~-~~d~~~v~~~l~kH~a 89 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASDEN-YKDPTNLQGKLQKHQA 89 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCS-SCSSSCHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcc-cCCHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999995 79999999999999999999876554 4789999999999999
Q ss_pred HHHHHHHhhhhHHhHhhhhhhh-ccChhchhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 991 LNEEAGELNMMISNVSIATEHM-NLNDADRLTVNDSVSSMQKRYAQLSRTIEDRISTVN 1048 (2174)
Q Consensus 991 l~~ei~~~~~~v~~l~~~~~~L-~~~~~~~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le 1048 (2174)
|+.++.++.+.+..+...|+.| ..+|++++.|..++..|+.+|+.|...+.+|...|.
T Consensus 90 fe~El~a~~~~l~~v~~~g~~Li~~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 90 FEAEVQANSGAIVKLDETGNLMISEGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999988 668889999999999999999999999999999885
No 36
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.38 E-value=4.1e-12 Score=132.54 Aligned_cols=134 Identities=14% Similarity=0.173 Sum_probs=122.7
Q ss_pred HHhhhhhchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHh
Q psy4474 1342 ELATKEVQPYVQRYETLKKNIAEAIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQIT 1421 (2174)
Q Consensus 1342 ~~~~~~l~~l~~~w~~L~~~~~~R~~~L~~a~~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~ 1421 (2174)
+.|..++..|..+|..|...+..|..+|++++ .++.|..+++++..||.+++..+.+. .++|+.+|..++.+|+.|+
T Consensus 15 ~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~-~l~~F~~d~~el~~Wi~ek~~~~~~~--~~~d~~~v~~~l~kH~afe 91 (149)
T 3f31_A 15 EDIQERRQQVLDRYHRFKELSTLRRQKLEDSY-RFQFFQRDAEELEKWIQEKLQIASDE--NYKDPTNLQGKLQKHQAFE 91 (149)
T ss_dssp THHHHHHHHHHHHTCSCHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTSC--SSCSSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcCc--ccCCHHHHHHHHHHHHHHH
Confidence 35778888899999999999999999999997 57899999999999999999876553 3478999999999999999
Q ss_pred hcchhhhhhHHHHHHHHHHHHhhcChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Q psy4474 1422 KSLPEGQKLIDKTVALKNNVLESTGPIGKENINQEINQITLDWTNLQNTLQDIDKHHA 1479 (2174)
Q Consensus 1422 ~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~~~l~~L~~~W~~L~~~~~~r~~~Le 1479 (2174)
.+|.++++.|..|...|..|+..+++ +.+.|+.++..|+.+|+.|...+..|...|.
T Consensus 92 ~El~a~~~~l~~v~~~g~~Li~~~~~-~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 92 AEVQANSGAIVKLDETGNLMISEGHF-ASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHTCT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998764 6889999999999999999999999999885
No 37
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.28 E-value=2.4e-11 Score=122.76 Aligned_cols=114 Identities=15% Similarity=0.248 Sum_probs=103.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcC--hhhHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTG--PIGKEN 1452 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~--~~~~~~ 1452 (2174)
.+++|...++++..||.+++..|.+..|+|.+++.++.++++|+.|+.+|..+++.|+.|...|..|+..++ |.....
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~ 82 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETE 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 357899999999999999999999888899999999999999999999999999999999999999987654 446778
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1453 INQEINQITLDWTNLQNTLQDIDKHHAKCLSLWNDF 1488 (2174)
Q Consensus 1453 i~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~~f 1488 (2174)
|+.++..|+.+|+.|...+..|+..|+.++..++.|
T Consensus 83 i~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 83 VQEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999876655
No 38
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.28 E-value=3.7e-11 Score=121.07 Aligned_cols=111 Identities=14% Similarity=0.223 Sum_probs=102.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcC--hhhHHHH
Q psy4474 1376 HEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTG--PIGKENI 1453 (2174)
Q Consensus 1376 ~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~--~~~~~~i 1453 (2174)
++.|++.++++..||.+++..|.+..|+|.|++.++.++++|+.|+.+|..+++.|+.|...|..|+..++ +.+...|
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i 83 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEI 83 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 46899999999999999999999988999999999999999999999999999999999999999987665 3456789
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1454 NQEINQITLDWTNLQNTLQDIDKHHAKCLSLWN 1486 (2174)
Q Consensus 1454 ~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~~~~ 1486 (2174)
+.++..|+.+|+.|...+.+|...|+.++..++
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 84 QEQMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999986543
No 39
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.14 E-value=3.2e-10 Score=114.13 Aligned_cols=104 Identities=13% Similarity=0.238 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChH-------HHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQ-------SKQ 315 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~-------~~~ 315 (2174)
.|+..++++..||.++|..+.+..++|.|++.++.++++|+.|..+|.+|++.|+.|+..|..|+..+++ ...
T Consensus 6 ~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i~~ 85 (118)
T 3uul_A 6 SYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEIQE 85 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHHHH
Confidence 5999999999999999999998888999999999999999999999999999999999999999875432 156
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 316 QLATITTRHGNVLKRAQKFTEAYEGIVSIHQ 346 (2174)
Q Consensus 316 ~~~~l~~r~~~L~~~~~~r~~~Le~~~~~~~ 346 (2174)
++..|+.||..|+..+.+|..+|+.++..++
T Consensus 86 ~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 86 QMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999876544
No 40
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.11 E-value=3.3e-10 Score=114.43 Aligned_cols=106 Identities=16% Similarity=0.214 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCCh--H-----HHH
Q psy4474 243 GYEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSE--Q-----SKQ 315 (2174)
Q Consensus 243 ~f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~--~-----~~~ 315 (2174)
+|...++++..||.++|..+.+..++|.|++.++.++++|+.|..+|.++++.|+.+...|..|+..++ + ...
T Consensus 6 ~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i~~ 85 (119)
T 3uun_A 6 RYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEVQE 85 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHHHH
Confidence 599999999999999999998878889999999999999999999999999999999999999976432 2 257
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 316 QLATITTRHGNVLKRAQKFTEAYEGIVSIHQAY 348 (2174)
Q Consensus 316 ~~~~l~~r~~~L~~~~~~r~~~Le~~~~~~~~f 348 (2174)
++..|+.||..|+..+.+|..+|+.++..++.|
T Consensus 86 ~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 86 QMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 899999999999999999999999998776655
No 41
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.95 E-value=1e-09 Score=107.58 Aligned_cols=102 Identities=14% Similarity=0.189 Sum_probs=96.6
Q ss_pred HHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHHHHHHHHHhhhhHHhHhhhhhhh-ccChhchhhHHHH
Q psy4474 947 HRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHM-NLNDADRLTVNDS 1025 (2174)
Q Consensus 947 ~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~l~~ei~~~~~~v~~l~~~~~~L-~~~~~~~~~i~~~ 1025 (2174)
.++.|..+++.++.||.+.+..+.+.++|.|+..++.++++|+.|+.++..+...|..|...|+.| ..+|++++.|..+
T Consensus 4 ~lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~~~~~I~~r 83 (107)
T 2spc_A 4 DLQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHYASNLVDEK 83 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 367899999999999999999999888999999999999999999999999999999999999988 7789999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1026 VSSMQKRYAQLSRTIEDRISTVN 1048 (2174)
Q Consensus 1026 ~~~L~~rw~~L~~~~~~R~~~Le 1048 (2174)
...|..+|+.|...+.+|+..|+
T Consensus 84 ~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 84 RKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999875
No 42
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.86 E-value=5.4e-08 Score=107.40 Aligned_cols=198 Identities=8% Similarity=0.060 Sum_probs=149.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHh------hc---
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLE------ST--- 1445 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~------~~--- 1445 (2174)
.+..|...+.+|..||..+...+.+. .+|+++..++.++.+|..|...-. .+++..-......+.. .+
T Consensus 12 ~~~eYe~~as~Ll~WI~~~~~~l~~r-~f~~sl~~vq~~l~~f~~fr~~ek--ppk~~EK~~Le~ll~~lqtklr~~~~~ 88 (235)
T 2odv_A 12 RWQEYRELVLLLLQWMRHHTAAFEER-RFPSSFEEIEILWSQFLKFKEMEL--PAKEADKNRSKGIYQSLEGAVQAGQLK 88 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHCC--CCSSHHHHHHHHHHHHHHHHHTH--HHHHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHhccC--CHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 34678999999999999999998875 567899999999999999987543 4444433332222211 11
Q ss_pred ChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCch
Q psy4474 1446 GPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKCLS-------LWNDFLSSKNTLEKWIEGFQKKIESEKDIGDCTNL 1518 (2174)
Q Consensus 1446 ~~~~~~~i~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~-------~~~~f~~~~~~l~~WL~~~e~~L~~~~~~~~~~~~ 1518 (2174)
.|++ ..+.+|+..|..|.....+|...|...+. ....|+..+...+.||+.++..|..+. ......
T Consensus 89 ppeg-----~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d~--~~l~~~ 161 (235)
T 2odv_A 89 VPPG-----YHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDV--RLLAAG 161 (235)
T ss_dssp CCTT-----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHTTTT
T ss_pred CCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hhcchh
Confidence 1222 22568999999999999999988776643 358899999999999999999995421 111233
Q ss_pred HhHHHHHHHHHhhhhhhchhhHHHHHhhhhhhhhhcccCChHHHHHHHHhhhhHHHHHHHHHHHHHHHHH
Q psy4474 1519 DDLEKYKALLQEGLHKEADNKKVLIDSFNKGIIGMTELESEEVKDLIQVGVHGLQVELNALLQNIEAEIN 1588 (2174)
Q Consensus 1519 ~~l~k~~~l~~ei~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~i~~~~~~l~~rw~~l~~~~~~r~~ 1588 (2174)
..+++|.++..+|.+ ++..|..+...+..|.. .++++++.|..++..|.++|..|...+..|..
T Consensus 162 ~a~k~~e~ie~dL~~-----~e~~i~~l~~~a~~L~~-~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 162 KVPQRAGEVERDLDK-----ADSMIRLLFNDVQTLKD-GRHPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp CCCSCHHHHHHHHHH-----HHHHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHh-CCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 447789999999998 56668888877777765 57789999999999999999999999887764
No 43
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.83 E-value=1.2e-08 Score=137.48 Aligned_cols=228 Identities=12% Similarity=0.110 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchh----hhhhHHHHH-HHHH
Q psy4474 1365 AIDKFETQANEHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPE----GQKLIDKTV-ALKN 1439 (2174)
Q Consensus 1365 R~~~L~~a~~~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~----~~~~v~~l~-~~~~ 1439 (2174)
|...|..+. ...+|......+..|+......+... ..+.++..++..+..|+.|...... ....+..+. ....
T Consensus 758 R~~~l~~~~-~~iQY~~~a~~L~~WIr~kqa~l~~r-~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqt 835 (1010)
T 1g8x_A 758 REQRLGSEQ-TKSDYLKRANELVQWINDKQASLESR-DFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQT 835 (1010)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCC-CCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhh-hccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Confidence 444555553 34568888999999999998887764 5788899999999999999987643 122233221 2222
Q ss_pred HHHhhcChhhHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhhccCC
Q psy4474 1440 NVLESTGPIGKENINQEINQITLDWTNLQNTLQDIDKHHAKCLS-------LWNDFLSSKNTLEKWIEGFQKKIESEKDI 1512 (2174)
Q Consensus 1440 ~L~~~~~~~~~~~i~~~l~~L~~~W~~L~~~~~~r~~~Le~~~~-------~~~~f~~~~~~l~~WL~~~e~~L~~~~~~ 1512 (2174)
.+...+.++..+.....+..|+.+|..|.....+|...|...+. ..++|...++..+.||.+++..|.++..+
T Consensus 836 klrl~~r~~~~p~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g 915 (1010)
T 1g8x_A 836 KLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETG 915 (1010)
T ss_dssp HHHTTTCCCCCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSC
T ss_pred HHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 23222221111112334678999999999999999999887643 36899999999999999999999986655
Q ss_pred CCCCch-HhHHHHHHHHHhhhhhhchhhHHHHH-hhhhhhhhhcccCChHHHHHHHHhhhhHH-HHHHHHHHHHHHHHHH
Q psy4474 1513 GDCTNL-DDLEKYKALLQEGLHKEADNKKVLID-SFNKGIIGMTELESEEVKDLIQVGVHGLQ-VELNALLQNIEAEINK 1589 (2174)
Q Consensus 1513 ~~~~~~-~~l~k~~~l~~ei~~~~~~~~~~~~~-~l~~~~~~l~~~~~~~~~~~i~~~~~~l~-~rw~~l~~~~~~r~~~ 1589 (2174)
...... ..+++|+++..||.+ ++..+. .+...+..|.. .++++++.|..+...|. .+|+.|...+..|+..
T Consensus 916 ~dL~~Vqal~KKhea~e~dl~a-----~e~ri~~~l~~~a~eL~~-~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~ 989 (1010)
T 1g8x_A 916 DSITAVQAKLKNLEAFDGECQS-----LEGQSNSDLLSILAQLTE-LNYNGVPELTERKDTFFAQQWTGVKSSAETYKNT 989 (1010)
T ss_dssp CSTTTTGGGTTSHHHHTTTTTH-----HHHTHHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHh-cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 444333 567999999999999 455566 67767777765 46788899999999996 8999999999999999
Q ss_pred HHHHHHHHHHH
Q psy4474 1590 VANAAQERKAM 1600 (2174)
Q Consensus 1590 L~~~~~~~~~f 1600 (2174)
|+++++..+.|
T Consensus 990 Le~~lq~~~~~ 1000 (1010)
T 1g8x_A 990 LLAELERLQKI 1000 (1010)
T ss_dssp TTTTTSTTTTT
T ss_pred HHHHHHHHHHH
Confidence 99988755444
No 44
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.80 E-value=1.7e-07 Score=103.34 Aligned_cols=195 Identities=10% Similarity=0.072 Sum_probs=144.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHHHHHHHHHhhh--hh--hH-HHHhh--hhhh---ccC
Q psy4474 343 SIHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERLKNLEKELGRI--GH--KT-VALKN--NVLE---STG 412 (2174)
Q Consensus 343 ~~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~~~l~~~l~~~--~~--~~-~~l~~--~~l~---~~~ 412 (2174)
..+..|...+.++..||..+...+... .++.++..++.++..+..|...-..- .+ .+ ..++. ..+. +..
T Consensus 11 ~~~~eYe~~as~Ll~WI~~~~~~l~~r-~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~p 89 (235)
T 2odv_A 11 LRWQEYRELVLLLLQWMRHHTAAFEER-RFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKV 89 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCC--CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 456889999999999999999999875 56788999999999988887654331 11 11 11111 1111 223
Q ss_pred ccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCCcHH
Q psy4474 413 PIGKENINQEINQITLDWTNLQNTLQVIDKHHAKC-------LSIWNDFLSSKNTLEKWIEGFQKKIEAEKDIGDCTNLD 485 (2174)
Q Consensus 413 ~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~-------~~~~~~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~~~ 485 (2174)
|+|. .+.+|+..|..|.....+|...|... .....+|...+.....||.++...|..+ +.+ .....
T Consensus 90 peg~-----~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d-~~~-l~~~~ 162 (235)
T 2odv_A 90 PPGY-----HPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSD-VRL-LAAGK 162 (235)
T ss_dssp CTTC-----SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHH-TTTTC
T ss_pred CCCC-----CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhh-cchhH
Confidence 3333 36789999999998766665555544 3455789999999999999999999432 222 12334
Q ss_pred HHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHhccC--CcchHHHHHHHHHHHHHHHHHHHHH
Q psy4474 486 DLEKYKALLQEVISHNSDMETLNDKCEALMELAAH--SPIREETLRLQALYAALVTSVQGLV 545 (2174)
Q Consensus 486 ~l~~~k~l~~ei~~~~~~l~~l~~~~~~L~~~~~~--~~i~~~~~~l~~~w~~L~~~~~~r~ 545 (2174)
.+++|.+|..+|.+++.+|..+...++.|....++ ..|..+...|..+|..|......|.
T Consensus 163 a~k~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~r~ 224 (235)
T 2odv_A 163 VPQRAGEVERDLDKADSMIRLLFNDVQTLKDGRHPQGEQMYRRVYRLHKRLVAIRTEYNLRL 224 (235)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999999999999999999999988765 5688889999999999988776654
No 45
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.80 E-value=2.3e-08 Score=134.82 Aligned_cols=210 Identities=11% Similarity=0.203 Sum_probs=167.4
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHH----hHHhHHHHHHHHH-Hh--cCC---ChHH
Q psy4474 244 YEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATS----HQQDLLQLKDKIE-SL--HQP---SEQS 313 (2174)
Q Consensus 244 f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~----~~~~v~~l~~~~~-~L--~~~---~~~~ 313 (2174)
|...+..+..||......+.. ..++.++..++..++.|+.+..+... ....++.+..... .+ ... .++.
T Consensus 771 Y~~~a~~L~~WIr~kqa~l~~-r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtklrl~~r~~~~p~~ 849 (1010)
T 1g8x_A 771 YLKRANELVQWINDKQASLES-RDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVAPA 849 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHh-hhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCcc
Confidence 999999999999999988776 45788999999999999999876432 2223333322222 11 111 1222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHhhccccccccHhhHHHHHHHH
Q psy4474 314 KQQLATITTRHGNVLKRAQKFTEAYEGIVS-------IHQAYTKAVLDTQEWIDATYNAVNMWGDLTLERVSLHSNLERL 386 (2174)
Q Consensus 314 ~~~~~~l~~r~~~L~~~~~~r~~~Le~~~~-------~~~~f~~~~~~~~~Wl~~~~~~l~~~~~~~~d~~~~~~~l~~~ 386 (2174)
......|+.+|..|.....+|...|...+. ..++|.+.++.+..||.+++..|.+ .+++.|+..++.++++|
T Consensus 850 gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s-~d~g~dL~~Vqal~KKh 928 (1010)
T 1g8x_A 850 GLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGS-NETGDSITAVQAKLKNL 928 (1010)
T ss_dssp TCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSS-CCSCCSTTTTGGGTTSH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-ccccccHHHHHHHHHHH
Confidence 345789999999999999999888877543 4689999999999999999999987 46888999999999999
Q ss_pred HHHHHHHhhhhhhHH-HHhh--hhhhccCccccccHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 387 KNLEKELGRIGHKTV-ALKN--NVLESTGPIGKENINQEINQIT-LDWTNLQNTLQVIDKHHAKCLSIWNDFL 455 (2174)
Q Consensus 387 ~~l~~~l~~~~~~~~-~l~~--~~l~~~~~~~~~~i~~~~~~l~-~~w~~L~~~~~~r~~~Le~~~~~~~~f~ 455 (2174)
+.++.+|..+++++. .+.. ..+...++.+.+.|..+++.|. ++|+.|...+..|+..|++++...+.|.
T Consensus 929 ea~e~dl~a~e~ri~~~l~~~a~eL~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~~~~~ 1001 (1010)
T 1g8x_A 929 EAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQKIE 1001 (1010)
T ss_dssp HHHTTTTTHHHHTHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998887 6653 4466777888999999999996 8999999999999999999876554443
No 46
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.79 E-value=1e-08 Score=100.31 Aligned_cols=103 Identities=12% Similarity=0.200 Sum_probs=95.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCccchHHHHHHHHHHHhhcchhhhhhHHHHHHHHHHHHhhcChhhHHHHH
Q psy4474 1375 EHEAYKQAYNEAYDWLRKAKLGAQANADCHGEQQTTKDKADKIKQITKSLPEGQKLIDKTVALKNNVLESTGPIGKENIN 1454 (2174)
Q Consensus 1375 ~~~~f~~~~~~l~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~~~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~i~ 1454 (2174)
.++.|..+++.+..||...+..+.+ .++|.++..|+.++++|+.|+.++..+..+|..|...|..|+..+++ +++.|.
T Consensus 4 ~lq~F~~d~~~~e~Wl~~~e~~l~~-~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~h~-~~~~I~ 81 (107)
T 2spc_A 4 DLQLYMRDCELAESWMSAREAFLNA-DDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQNHY-ASNLVD 81 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-HHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC-cccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC-CHHHHH
Confidence 4678999999999999999988876 46788999999999999999999999999999999999999998865 588899
Q ss_pred HHHHHHHHhHHHHHHHHHHHHHHHH
Q psy4474 1455 QEINQITLDWTNLQNTLQDIDKHHA 1479 (2174)
Q Consensus 1455 ~~l~~L~~~W~~L~~~~~~r~~~Le 1479 (2174)
.++..|..+|+.|...+..|+..|+
T Consensus 82 ~r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 82 EKRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999875
No 47
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=98.49 E-value=3e-08 Score=134.12 Aligned_cols=239 Identities=13% Similarity=0.117 Sum_probs=156.8
Q ss_pred chhHhHHHHHHhhHHHHHHhHhhhHhhhhhHHHHHhHHHHHHhHHHhhhhhcCCch---hhhhHHHHHHHHHhhh----h
Q psy4474 28 IVDFRYQLLHVMSKEVINRWQGLVYDHKLYNDVYVKTDDWLTGLEKDLDTLKNTTD---VEAKNSLLQKLLTEKD----Q 100 (2174)
Q Consensus 28 ~l~~~y~~L~~~~~~r~~~L~~~~~~~q~f~~~~~e~~~Wl~e~e~~l~~~~~~~~---l~~~~~~~~~l~~e~~----~ 100 (2174)
+|=-++-.+-.+-..|..+|... .|...+.++..|+.++...+.....+.+ +.+.+..+..+..... .
T Consensus 739 kVF~r~~~~~~LE~~R~~~l~~~-----eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ 813 (995)
T 2ycu_A 739 KIFFRAGVLAQLEEERASEQTKS-----DYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQ 813 (995)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHH
T ss_pred EEEEecchhhhHHHHHHHHhhhh-----hHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHH
Confidence 34446666666666666666654 3666788999999998877654443333 3333333333333221 1
Q ss_pred hhhhhhhhhccccccccccccccchHHHHHHHHHhhhhhhhhhhHHHhhhhhHHHHHHHhhccCCC--cchhhhHHHHHH
Q psy4474 101 AGHKLTYLTSSGEKLYLDTAAKGREVVRQQLRALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQ--INKDQALEKAIV 178 (2174)
Q Consensus 101 ~~~~l~~l~~~g~~l~~~~~~~~~~~i~~~l~~l~~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~--~~~~~~i~~~~~ 178 (2174)
...++..+....+.-+ .+.. ++.++ ..-.+.
T Consensus 814 ek~rLeal~~~iqtkL----------------------------------------------rl~~~~~y~p~-~gl~~~ 846 (995)
T 2ycu_A 814 EVSELEAIYNSLQTKL----------------------------------------------RLIKREPFVAP-AGLTPN 846 (995)
T ss_dssp HHHHHCSSSCCCCCSS----------------------------------------------CSSTHHHHHHH-HHHHHH
T ss_pred HHHHHHHHHHHHHHHH----------------------------------------------HhhcCCCCCcc-hhccHH
Confidence 1222333333222111 1111 11122 133578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhhhhchHHHhhhhhhchhhHHHHHHHHHHHHHHH
Q psy4474 179 SVNKRYEDLVDGILKTISQLEESLDIFQQFQQLQKAYQEDQKQLWDKLSSLTERELKGKLSSWCGYEESVATLLDWLKVT 258 (2174)
Q Consensus 179 ~l~~r~~~l~~~~~~r~~~L~~~~~~~q~~~~~~k~~~~~~~~~~~~l~~~~~~~l~~~l~~w~~f~~~~~~l~~WL~e~ 258 (2174)
.|+.+|..|......|...|...+..... |. ..-.+|...++.+++||.++
T Consensus 847 ~L~~~W~~L~~ae~er~~~L~~el~Rler------------------L~-----------~la~kf~~ka~~~e~Wl~ek 897 (995)
T 2ycu_A 847 EIDSTWSALEKAEQEHAEALRIELKRQKK------------------IA-----------VLLQKYNRILKKLENWATTK 897 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------------HH-----------HTTTGGGGCCCCCCCHHHHH
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHH------------------HH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876654331 11 12235999999999999999
Q ss_pred HhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHH-HHHHHHHHhcCCChHH----HHHHHHH-HHHHHHHHHHHH
Q psy4474 259 EKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLL-QLKDKIESLHQPSEQS----KQQLATI-TTRHGNVLKRAQ 332 (2174)
Q Consensus 259 e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~-~l~~~~~~L~~~~~~~----~~~~~~l-~~r~~~L~~~~~ 332 (2174)
|..+.+. +.|.|+..++.++++|+.|+.||.+++.++. .|...|+.|.+.+++. ..+...| .++|..|...+.
T Consensus 898 e~~l~s~-d~g~dl~~vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~ 976 (995)
T 2ycu_A 898 SVYLGSN-ETGDSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAE 976 (995)
T ss_dssp HHHHHHH-THHHHHHHHHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSC
T ss_pred HHHhccc-ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999874 4678999999999999999999999999998 9999999999988765 5678888 599999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4474 333 KFTEAYEGIVSIHQAY 348 (2174)
Q Consensus 333 ~r~~~Le~~~~~~~~f 348 (2174)
.|+.+|++++..++..
T Consensus 977 ~Rr~~L~~~~~~~q~~ 992 (995)
T 2ycu_A 977 TYKNTLLAELERLQKI 992 (995)
T ss_dssp CCC-------------
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999998776644
No 48
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=98.46 E-value=8.8e-08 Score=129.64 Aligned_cols=138 Identities=10% Similarity=0.134 Sum_probs=113.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHH
Q psy4474 918 DKIDRLEKETKAQSDRIQDALKTLNQLIG-------HRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQ 990 (2174)
Q Consensus 918 ~~l~~L~~~~~~l~~~~~~r~~~L~~~~~-------~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~ 990 (2174)
-....|+.+|..|......+...|...+. .+.+|...++.+++||.++++.+.+++.|.|+..++.++++|++
T Consensus 843 l~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~g~dl~~vqallkKhea 922 (995)
T 2ycu_A 843 LTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETGDSITAVQAKLKNLEA 922 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCHHHHHHHHHHHHH
Confidence 45788999999998888888877765442 35789999999999999999999998889999999999999999
Q ss_pred HHHHHHHhhhhHH-hHhhhhhhh-ccChhchhhHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 991 LNEEAGELNMMIS-NVSIATEHM-NLNDADRLTVNDSVSSM-QKRYAQLSRTIEDRISTVNNKLQSVK 1055 (2174)
Q Consensus 991 l~~ei~~~~~~v~-~l~~~~~~L-~~~~~~~~~i~~~~~~L-~~rw~~L~~~~~~R~~~Le~~l~~~~ 1055 (2174)
|+.++..++..+. .+...|+.| ..++++++.|..+...| .++|+.|...+.+|+.+|++++..++
T Consensus 923 ~e~dl~a~e~ri~~~l~~~a~~L~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q 990 (995)
T 2ycu_A 923 FDGECQSLEGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 990 (995)
T ss_dssp HHHHHHHTTTCSCSSHHHHHHHHTTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 899999988 66788999999999999 69999999999999999999876544
No 49
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=97.56 E-value=0.0011 Score=63.82 Aligned_cols=106 Identities=7% Similarity=0.084 Sum_probs=84.3
Q ss_pred HHHHHHHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHHHHHHHHHhhhhHHhHhhhhhhhc----cCh-
Q psy4474 942 NQLIGHRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQLNEEAGELNMMISNVSIATEHMN----LND- 1016 (2174)
Q Consensus 942 ~~~~~~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~l~~ei~~~~~~v~~l~~~~~~L~----~~~- 1016 (2174)
+..-.++..|-..+..+..|+..++..|.......+++.++.++.+|..|...+..++..+..|...++.|. +.+
T Consensus 8 e~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~~ 87 (129)
T 1wlx_A 8 EAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNHI 87 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhCc
Confidence 333345788999999999999999999986556678999999999999999999999988888855555441 111
Q ss_pred ---h--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 1017 ---A--DRLTVNDSVSSMQKRYAQLSRTIEDRISTVNN 1049 (2174)
Q Consensus 1017 ---~--~~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le~ 1049 (2174)
+ .-..| ....|...|+.+...+.+|...|+.
T Consensus 88 ~~~~~npYT~i--t~~~l~~~W~~l~~li~~Rd~~Lq~ 123 (129)
T 1wlx_A 88 KLSGSNPYTTV--TPQIINSKWEKVQQLVPKRDHALLE 123 (129)
T ss_dssp CCSSSCSSCCC--CHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCccc--hHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 12223 2789999999999999999999976
No 50
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=97.28 E-value=0.0023 Score=61.55 Aligned_cols=111 Identities=9% Similarity=0.190 Sum_probs=87.4
Q ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCHHHHHHHHHHHHHHHHhccccChhHHHHHHHHHHHhc---cCC
Q psy4474 548 VEKNLSDQTEFLAKKEEVEAWLHKAHATVQECAGNGSKNVLKERLDTVNMVAERIPEGQHLMSVLQDTFTKALD---TTP 624 (2174)
Q Consensus 548 Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~d~~~~~~~l~~~~~~~~el~~~~~~l~~l~~~~~~l~~---~~~ 624 (2174)
|+..-..+..|-+...-+..|+..+++.|.......+++.|+.++..|..|..++......+..+...+..+-. .++
T Consensus 7 le~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~~ 86 (129)
T 1wlx_A 7 LEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESNH 86 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34344567789999999999999999999976667899999999999999999999999999988666555432 221
Q ss_pred -----CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 625 -----SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYI 660 (2174)
Q Consensus 625 -----~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~ 660 (2174)
+.....|. ...+...|..+...+..|...|..-.
T Consensus 87 ~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E~ 125 (129)
T 1wlx_A 87 IKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEEQ 125 (129)
T ss_dssp CCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11122222 67899999999999999999997654
No 51
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=89.08 E-value=35 Score=38.82 Aligned_cols=16 Identities=6% Similarity=-0.029 Sum_probs=6.3
Q ss_pred HHHHHHHHHhhhhhHH
Q psy4474 490 YKALLQEVISHNSDME 505 (2174)
Q Consensus 490 ~k~l~~ei~~~~~~l~ 505 (2174)
+..+..++......+.
T Consensus 8 ~~~l~~~~~~~~~~~~ 23 (284)
T 1c1g_A 8 MQMLKLDKENALDRAD 23 (284)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHH
Confidence 3344444443333333
No 52
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=86.35 E-value=50 Score=37.50 Aligned_cols=43 Identities=14% Similarity=0.158 Sum_probs=22.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHH
Q psy4474 630 SLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNR 672 (2174)
Q Consensus 630 ~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~ 672 (2174)
.|+.++..+...|..+...+......+...-.....+...+..
T Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~ 45 (284)
T 1c1g_A 3 AIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVS 45 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3556666666666666555555555554444433333333333
No 53
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=78.67 E-value=4.1 Score=57.43 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=8.2
Q ss_pred HHHHHHHHHHHHHHHH
Q psy4474 1377 EAYKQAYNEAYDWLRK 1392 (2174)
Q Consensus 1377 ~~f~~~~~~l~~WL~~ 1392 (2174)
..|...+..|+.-|..
T Consensus 660 ~~f~~~l~~L~~~l~~ 675 (1184)
T 1i84_S 660 QLYKEQLTKLMTTLRN 675 (1184)
T ss_dssp HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHh
Confidence 3455555555555543
No 54
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=77.01 E-value=99 Score=34.56 Aligned_cols=22 Identities=14% Similarity=0.282 Sum_probs=11.3
Q ss_pred hHHHHHHHHHHHHHHHHHHhhh
Q psy4474 2025 AFVDKYEECSQKLAQVEAKYAK 2046 (2174)
Q Consensus 2025 ~f~~~~~~l~~wl~~~e~~l~~ 2046 (2174)
.+...+.++..-+......+..
T Consensus 64 ~~e~~i~~~~~ri~~~~~~l~~ 85 (256)
T 3na7_A 64 KNEQTLQDTNAKIASIQKKMSE 85 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc
Confidence 4445555555555555555543
No 55
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=76.55 E-value=77 Score=37.98 Aligned_cols=72 Identities=11% Similarity=0.166 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhhhccHHHHHHHHHHHH
Q psy4474 1218 ITEQLQSRKQQLHNLRKTVEKLRQQNEKRAAESEKLGAELEEIIEALHARETAVPSSSRLHNLRKTVEKLRQQNE 1292 (2174)
Q Consensus 1218 i~~~~~~l~~~~~~L~~~~~~~~~~~~~~~~~l~~f~~~~~~~~~wl~~~~~~l~~~~~~~~~~~~~e~l~~~~~ 1292 (2174)
+..++..|+.+++.....+..|+..+++...+++++..+++.-++-... .-.....+..+...++.++++++
T Consensus 115 LRRrIqyLKekVdnQlsnIrvLQsnLedq~~kIQRLEvDIdiqirsCKg---sCsr~~~~~vd~~sY~~~QKQLe 186 (562)
T 3ghg_A 115 LRSRIEVLKRKVIEKVQHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCRG---SCSRALAREVDLKDYEDQQKQLE 186 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG---TBSCCCCCCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc---cccchheeecchHHHHHHHHHHH
Confidence 3344455555555444555555555666666666666666554444332 22233467888889998888776
No 56
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=74.91 E-value=4.9 Score=56.65 Aligned_cols=16 Identities=19% Similarity=0.059 Sum_probs=8.5
Q ss_pred ccHhhHHHHHHHHHHH
Q psy4474 374 LERVSLHSNLERLKNL 389 (2174)
Q Consensus 374 ~d~~~~~~~l~~~~~l 389 (2174)
.|...|..+++-...+
T Consensus 695 fd~~~V~~QLr~~Gvl 710 (1184)
T 1i84_S 695 LDAHLVLEQLRCNGVL 710 (1184)
T ss_dssp CCHHHHHHHHHHTTHH
T ss_pred ccHHHHHHHHhhcCch
Confidence 3555566666554433
No 57
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=46.31 E-value=8.5e+02 Score=37.79 Aligned_cols=19 Identities=11% Similarity=0.254 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy4474 175 KAIVSVNKRYEDLVDGILK 193 (2174)
Q Consensus 175 ~~~~~l~~r~~~l~~~~~~ 193 (2174)
.+...+...|..+...+..
T Consensus 271 ~rF~~vd~~~~~im~~~~~ 289 (3245)
T 3vkg_A 271 TRFKSINSEFIAILKKVSG 289 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4567777777777666643
No 58
>2lw1_A ABC transporter ATP-binding protein UUP; ABC REG subfamily, DNA binding protein; NMR {Escherichia coli}
Probab=45.97 E-value=98 Score=27.94 Aligned_cols=59 Identities=10% Similarity=0.052 Sum_probs=47.6
Q ss_pred HHHHHHHHHHHHHHHHhhhccccccCCCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHH
Q psy4474 244 YEESVATLLDWLKVTEKKLGDEMELKTTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDK 302 (2174)
Q Consensus 244 f~~~~~~l~~WL~e~e~~l~~~~~~~~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~ 302 (2174)
....+..++.=|...+..|..++.+..|.+.+.....++..+..+|...-.+...|..+
T Consensus 27 le~~Ie~LE~~i~~le~~ladp~~y~~d~~~~~~l~~~l~~~e~eLe~~~erWeeLe~~ 85 (89)
T 2lw1_A 27 LPQLLEDLEAKLEALQTQVADASFFSQPHEQTQKVLADMAAAEQELEQAFERWEYLEAL 85 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56667777777888888888777677889999999999999998888888887777654
No 59
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=34.91 E-value=5.1e+02 Score=28.70 Aligned_cols=84 Identities=14% Similarity=0.133 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhHHhhccccccCChHHHHHHHHHHHHHHHHHH
Q psy4474 917 KDKIDRLEKETKAQSDRIQDALKTLNQLIGHRKEFEVDVENVEAKLKELEVAVEGDVKTNNVLMLQELLNKYAQLNEEAG 996 (2174)
Q Consensus 917 ~~~l~~L~~~~~~l~~~~~~r~~~L~~~~~~~~~f~~~~~~~~~WL~e~e~~l~~~~~~~d~~~l~~~l~k~~~l~~ei~ 996 (2174)
...+..+......+...+......+.+.-.....+..++..+..-+...+..+.+. .++.....+......+...+.
T Consensus 31 p~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v---~~~kE~~aL~kEie~~~~~i~ 107 (256)
T 3na7_A 31 RKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEI---KSERELRSLNIEEDIAKERSN 107 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC---SSSSHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc---CCHHHHHHHHHHHHHHHHHHH
Confidence 35566666666666666666666666666677778888888888888888877542 233333343344444444544
Q ss_pred HhhhhHH
Q psy4474 997 ELNMMIS 1003 (2174)
Q Consensus 997 ~~~~~v~ 1003 (2174)
..+..+.
T Consensus 108 ~lE~eil 114 (256)
T 3na7_A 108 QANREIE 114 (256)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 4444444
No 60
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=32.40 E-value=3.3e+02 Score=25.80 Aligned_cols=85 Identities=13% Similarity=0.229 Sum_probs=54.0
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCChHHHHHHHHHHHH
Q psy4474 1018 DRLTVNDSVSSMQKRYAQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLAR--PVSTQAEDISEALTVYQK 1095 (2174)
Q Consensus 1018 ~~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le~~l~~~~~f~~~~~~~~~wl~~~e~~l~~--~~~~~~~~~~~~l~~~~~ 1095 (2174)
++..|..+++.|...|+.|...=..|-+...........-.....++..-|.+....+.. +...-.+.....+++++.
T Consensus 3 ~a~~V~s~l~~LEaeyq~L~~kE~qrynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~~~~~~~yK~eY~~L~KkYk~ 82 (119)
T 2avr_X 3 DAASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYED 82 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 455788899999999999988877776665554333333333333444444444444433 445556777888888887
Q ss_pred HHHHHHh
Q psy4474 1096 LLDEINS 1102 (2174)
Q Consensus 1096 l~~el~~ 1102 (2174)
+...|..
T Consensus 83 ~~~~Ld~ 89 (119)
T 2avr_X 83 ALKKLEA 89 (119)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7777764
No 61
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=29.82 E-value=1.1e+02 Score=27.76 Aligned_cols=56 Identities=21% Similarity=0.453 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHh-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4474 1666 AMYRDLANLRYDFEKCVSSLSDVKQG-----LESRLVQWNEYETSLGKLITWLNDTENVLKN 1722 (2174)
Q Consensus 1666 ~i~~~l~~l~~~w~~L~~~~~~r~~~-----L~~~~~~~~~f~~~~~~l~~Wl~~~e~~L~~ 1722 (2174)
.++..+..|..+|..|. .|.+.+.. +++.....+.|...+.+-..||...-..|..
T Consensus 24 ~Lq~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle~ 84 (94)
T 3fx7_A 24 LLREEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEE 84 (94)
T ss_dssp HHHHHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHhHH
Confidence 34555566666777774 55544332 4444556677888888888888887766643
No 62
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=29.43 E-value=1.5e+02 Score=26.90 Aligned_cols=58 Identities=21% Similarity=0.381 Sum_probs=38.6
Q ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy4474 1450 KENINQEINQITLDWTNLQNTLQDIDK-----HHAKCLSLWNDFLSSKNTLEKWIEGFQKKIES 1508 (2174)
Q Consensus 1450 ~~~i~~~l~~L~~~W~~L~~~~~~r~~-----~Le~~~~~~~~f~~~~~~l~~WL~~~e~~L~~ 1508 (2174)
.+.++.....|+.+|+.|. .|.+.+. .+++....+..|...+.+-..||...-+.+..
T Consensus 22 ~d~Lq~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle~ 84 (94)
T 3fx7_A 22 KELLREEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEE 84 (94)
T ss_dssp HHHHHHHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHhHH
Confidence 3446666777777777775 4544433 35566666778888888888888876665544
No 63
>1deq_A Fibrinogen (alpha chain); coiled-coil, blood clotting; 3.50A {Bos taurus} SCOP: i.9.1.1
Probab=28.38 E-value=7.2e+02 Score=28.72 Aligned_cols=142 Identities=13% Similarity=0.101 Sum_probs=0.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhHHHHHhhhCCCCCcccccchhhhhHHhh
Q psy4474 625 SDQQDSLREAMTVLRDSWDRLNRDLKSTSTQLKSYIARWNELDDLYNRFNMWLSGVENKLNEPSPVFTEIDLNTKWQQYV 704 (2174)
Q Consensus 625 ~~~~~~i~~~~~~l~~~w~~L~~~~~~r~~~Le~~~~~~~~f~~~~~~l~~Wl~~~e~~l~~~~~~~~~~~~~~~~~~~~ 704 (2174)
|.++ .|+..+.... ..+...+..-+..|.........-...+..+..-+..........+.....+ ...+.
T Consensus 49 PsGC-rLqg~Ldk~e---r~~~~rIe~L~~~L~~~s~s~~~~~~y~~~~~~~lk~~~~q~~dndn~~~e~-----s~eLe 119 (390)
T 1deq_A 49 PSGC-RMKGLIDEVD---QDFTSRINKLRDSLFNYQKNSKDSNTLTKNIVELMRGDFAKANNNDNTFKQI-----NEDLR 119 (390)
T ss_pred Cccc-hHHHHHHHhh---hhHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhccchHHHHHH-----HHHHH
Q ss_pred hhHHhhhhhhhhHHHHHhhhHhHHHHHHHHHHHHHHHHHHchhChHHHHHHHHHHhhhhhhhhhhhhHHHH
Q psy4474 705 NDELEWENHSQNTLQWLDNIRSDMKTLLERSKHIVDDIEKKKDDLKPIQKEAQQLSEWDSSIVPKVSDLET 775 (2174)
Q Consensus 705 ~~~~~~~~~~~~~l~~l~~~~~~~~~~l~k~~~l~~el~~~~~~l~~l~~~~~~L~~~~~~i~~~l~~L~~ 775 (2174)
++..-++..+...+..+..++..|+.++-+++.|+.+|........--...+-.+.-...........|.+
T Consensus 120 ~~i~~lk~~V~~q~~~ir~Lq~~l~~q~~kiqRLE~~Id~c~~~C~~sC~~~l~~~vD~e~ye~qqKQL~q 190 (390)
T 1deq_A 120 SRIEILRRKVIEQVQRINLLQKNVRDQLVDMKRLEVDIDIKIRSCKGSCSRALEHKVDLEDYKNQQKQLEQ 190 (390)
T ss_pred HHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchhhhhhccHHHHHHHHHHHHh
No 64
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=27.94 E-value=8.8e+02 Score=29.33 Aligned_cols=21 Identities=5% Similarity=0.189 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHhcccccc
Q psy4474 1924 EFLAKKEEVEAWLHKAHATVQ 1944 (2174)
Q Consensus 1924 ~f~~~~~~~~~Wl~~~e~~l~ 1944 (2174)
++.+...++..|.......|.
T Consensus 75 dlsKnsKdseqy~k~~~E~Lr 95 (562)
T 3ghg_A 75 EYQKNNKDSHSLTTNIMEILR 95 (562)
T ss_dssp HHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHhhchhHHHHHHHHHHHHH
Confidence 345566666777666665554
No 65
>3tnu_A Keratin, type I cytoskeletal 14; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.87 E-value=4.9e+02 Score=25.34 Aligned_cols=23 Identities=13% Similarity=0.304 Sum_probs=13.6
Q ss_pred HHHHHHHHHHHHhhhhhhHHHHH
Q psy4474 2057 LQKRQGQLTALLTEKVDMDVLLN 2079 (2174)
Q Consensus 2057 ~~~~~~~~~~l~~~~~~~~~~v~ 2079 (2174)
+..++..++.|..-.-.++.+|.
T Consensus 100 m~~ql~EYq~Ll~vKl~Ld~EIa 122 (131)
T 3tnu_A 100 MEQQNQEYKILLDVKTRLEQEIA 122 (131)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 44566666666665555555554
No 66
>3tnu_B Keratin, type II cytoskeletal 5; coiled-coil, structural support, cytosolic protein; 3.00A {Homo sapiens}
Probab=24.86 E-value=4.8e+02 Score=25.28 Aligned_cols=25 Identities=16% Similarity=0.375 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHhhhhhhHHHHHH
Q psy4474 2056 ELQKRQGQLTALLTEKVDMDVLLNA 2080 (2174)
Q Consensus 2056 ~~~~~~~~~~~l~~~~~~~~~~v~~ 2080 (2174)
++..++..++.|..-.-.++.+|..
T Consensus 97 e~~~ql~EYq~LlnvKl~Ld~EIat 121 (129)
T 3tnu_B 97 DMARLLREYQELMNTKLALDVEIAT 121 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445666666666655555555543
No 67
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=24.51 E-value=6.8e+02 Score=26.90 Aligned_cols=156 Identities=14% Similarity=0.141 Sum_probs=75.5
Q ss_pred ccchhHhHHHHHHhhHHHHHHhHhhhHhhhhhHHHHHhHHHHHHhHHHhhhhhcCCchhhhhHHHHHHHHHhhhhhhhhh
Q psy4474 26 KPIVDFRYQLLHVMSKEVINRWQGLVYDHKLYNDVYVKTDDWLTGLEKDLDTLKNTTDVEAKNSLLQKLLTEKDQAGHKL 105 (2174)
Q Consensus 26 ~~~l~~~y~~L~~~~~~r~~~L~~~~~~~q~f~~~~~e~~~Wl~e~e~~l~~~~~~~~l~~~~~~~~~l~~e~~~~~~~l 105 (2174)
+......|..|+..++.-.+++....+.+..|-+...+ +..++..+...... -+. -|..+...-...-.-+
T Consensus 16 l~~~q~~Y~~L~~~~~~l~~~~~~l~qtq~~lG~~f~~----l~~~~p~l~~~f~~---~~~--~~r~~~k~g~~Ll~~L 86 (224)
T 1i4d_A 16 LRETKRKYESVLQLGRALTAHLYSLLQTQHALGDAFAD----LSQKSPELQEEFGY---NAE--TQKLLCKNGETLLGAV 86 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHTCGGGHHHHHH---HHH--HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHhhCcHHHHHHHH---HHH--HHHHHHHhHHHHHHHH
Confidence 34556789999999999999888887666554443333 33332222110000 000 0000000000000111
Q ss_pred hhhhccccccccccccccchHHHHHHHHHhhhhhhhhhhHHHhhhhhHHHHHHHhhccCCCcchhhhHHHHHHHHHHHHH
Q psy4474 106 TYLTSSGEKLYLDTAAKGREVVRQQLRALRDSKCSKTTLQEVLSHKRIIESLLDKSKSLPQINKDQALEKAIVSVNKRYE 185 (2174)
Q Consensus 106 ~~l~~~g~~l~~~~~~~~~~~i~~~l~~l~~~w~~k~l~~e~~~~~~~v~~l~~~~~~L~~~~~~~~i~~~~~~l~~r~~ 185 (2174)
..+...-+.++..+.+.+..+|++. ....-|-.++...++.+......-...+....|+........+|+
T Consensus 87 ~~f~s~l~T~~~kaI~DT~lTIk~y----------e~aR~EY~ay~~~~ee~~~~~~~~~~l~rve~~q~~~~~ak~kf~ 156 (224)
T 1i4d_A 87 NFFVSSINTLVTKTMEDTLMTVKQY----------EAARLEYDAYRTDLEELSLGPRDAGTRGRLESAQATFQAHRDKYE 156 (224)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHC------------CHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHhccHHHHHHHHH----------HHHhHhHHHHHhhHHHhhcccccccchhhHHHHHHHHHHHHHHHH
Confidence 1111111222222223333445443 333345566666666554432111112345678889999999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy4474 186 DLVDGILKTISQLEE 200 (2174)
Q Consensus 186 ~l~~~~~~r~~~L~~ 200 (2174)
.|+.-+......|.+
T Consensus 157 kLR~DV~~KleLLd~ 171 (224)
T 1i4d_A 157 KLRGDVAIKLKFLEE 171 (224)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhh
Confidence 999999988888865
No 68
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=22.38 E-value=5.1e+02 Score=24.66 Aligned_cols=85 Identities=13% Similarity=0.229 Sum_probs=49.7
Q ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccCCChHHHHHHHHHHHH
Q psy4474 1018 DRLTVNDSVSSMQKRYAQLSRTIEDRISTVNNKLQSVKRLQHKVEEAKALLQKAESQLAR--PVSTQAEDISEALTVYQK 1095 (2174)
Q Consensus 1018 ~~~~i~~~~~~L~~rw~~L~~~~~~R~~~Le~~l~~~~~f~~~~~~~~~wl~~~e~~l~~--~~~~~~~~~~~~l~~~~~ 1095 (2174)
++..|..+++.|...|+.|...=..|-............-......+..-|.+....+.. ...+-.......+..++.
T Consensus 3 ~a~~i~~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~ 82 (119)
T 3etw_A 3 DAASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYED 82 (119)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHH
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHH
Confidence 355788899999999999988877777766644333333333333334444444433322 233344666666666666
Q ss_pred HHHHHHh
Q psy4474 1096 LLDEINS 1102 (2174)
Q Consensus 1096 l~~el~~ 1102 (2174)
+..+|..
T Consensus 83 ~~keLd~ 89 (119)
T 3etw_A 83 ALKKLEA 89 (119)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6666654
No 69
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=21.44 E-value=8.2e+02 Score=26.72 Aligned_cols=71 Identities=8% Similarity=0.012 Sum_probs=41.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHhHHhHHHHHHHHHHhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4474 270 TTLDEKKAQLQVYRTIYQDATSHQQDLLQLKDKIESLHQPSEQSKQQLATITTRHGNVLKRAQKFTEAYEG 340 (2174)
Q Consensus 270 ~d~~~~~~~l~~~~~l~~el~~~~~~v~~l~~~~~~L~~~~~~~~~~~~~l~~r~~~L~~~~~~r~~~Le~ 340 (2174)
.....++..+++...-.-|...++..+..+......-...-......+......|..+...+.+....|..
T Consensus 141 ~~~~~i~~~ikKR~~k~lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~ 211 (251)
T 2fic_A 141 GQFPDIKSRIAKRGRKLVDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWN 211 (251)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHhhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45677788888877777788888888887765543200000112445666677777776666665555543
No 70
>2ke4_A CDC42-interacting protein 4; CIP4, TC10, coiled-coil, alternative splicing, cell membrane, coiled coil, cytoplasm, cytoskeleton, endocytosis; NMR {Homo sapiens}
Probab=20.11 E-value=2.8e+02 Score=25.46 Aligned_cols=72 Identities=21% Similarity=0.070 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhhhhhhHHHHHHHHHhhHHHHhcCCCCCCchhhhHHHHHHHHHHHHHHhhhhhhhhhHHhHHHHHHhhc
Q psy4474 2058 QKRQGQLTALLTEKVDMDVLLNACVDLCDKVYESTSEPGHEPLRVQMEKLQQAVEALYDKITVTESLILSQVEAKYAKLI 2137 (2174)
Q Consensus 2058 ~~~~~~~~~l~~~~~~~~~~v~~~~~~~~~ll~~~~~~~~~~i~~~~~~l~~~w~~L~~~~~~R~~~~~~~~~~f~~~~~ 2137 (2174)
......+..+.+++..-....+++..+-.....+....|...+...+.++...+..|.. .++.|...|.
T Consensus 18 kkL~~Ki~el~~ei~ke~~~regl~Km~~vY~~nP~~GD~~s~~~~L~e~~~kid~L~~-----------el~K~q~~L~ 86 (98)
T 2ke4_A 18 KRLQQQLEERSRELQKEVDQREALKKMKDVYEKTPQMGDPASLEPQIAETLSNIERLKL-----------EVQKYEAWLA 86 (98)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCGGGCCGGGSHHHHHHHHHHHHHHHH-----------HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCHHHHHHHHHHHHHHHHHHHH-----------HHHHHHHHHH
Q ss_pred Ccc
Q psy4474 2138 EPE 2140 (2174)
Q Consensus 2138 e~~ 2140 (2174)
|++
T Consensus 87 e~e 89 (98)
T 2ke4_A 87 EAE 89 (98)
T ss_dssp HHH
T ss_pred HHh
Done!