BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4475
(849 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P11533|DMD_CHICK Dystrophin OS=Gallus gallus GN=DMD PE=2 SV=1
Length = 3660
Score = 63.9 bits (154), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 152/323 (47%), Gaps = 18/323 (5%)
Query: 479 VGEVDG-NSATVQEKIDKYDKE-NQSEIDMLNDVWKEIKPK-ADQESDQLIEDQIERIND 535
VG++D N +++K + D E + ++D L + +K K ++QE+ +I D+IE+I
Sbjct: 2497 VGDLDDINDMIIKQKANMQDLEQRRPQLDELITAAQNLKNKTSNQEARTIITDRIEKIQS 2556
Query: 536 QWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQN 595
QW+ + G L RR++L E+ + Q + +E+ L+ + +E + +++ L +
Sbjct: 2557 QWDDVHGYLQNRRQQLHEMQKDSTQWLEAKQEAEQVLEQAKAKLESWKEISYTVEALKKQ 2616
Query: 596 KSELESLLGTVESEKPKVSQISTLA-APIVKFLKKDGLDLQKRITALELLSEELNSKLEE 654
SEL+ + + + ++ +A P+ + D ++ + +N ++ E
Sbjct: 2617 NSELKQFSKEIRQWQMNIEGVNDVALKPVRDYSADDTRKVELMTDNINATWATINKRVSE 2676
Query: 655 KGKEVQKAKAMRAAYLTDVEKIGTWLQDAE--------AKIQDRTLP-PQTLIQFIQQ-- 703
+ ++ A M + D+EK WL +AE A +++TL PQ + + ++Q
Sbjct: 2677 REAALESALLMLQEFYLDLEKFLAWLTEAETTANVLQDATHKEKTLEDPQMVRELMKQWQ 2736
Query: 704 -LEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKE 762
L+ E+ D + G +I + E +E+ L+Q + + + ++ K +
Sbjct: 2737 DLQAEIDAHTDIFHNLDENGQKILRSLEGSEDAVLLQRRLDNMNFRWSELRKKSLNIRSH 2796
Query: 763 VTGCDDAWKHF-LSLHAEVMKWV 784
+ D WK LSL E++ W+
Sbjct: 2797 LEASTDQWKRLHLSLQ-ELLAWL 2818
>sp|O97592|DMD_CANFA Dystrophin OS=Canis familiaris GN=DMD PE=2 SV=1
Length = 3680
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 129/287 (44%), Gaps = 27/287 (9%)
Query: 518 ADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVET 577
++QE+ +I D+IERI QW+ + L RR +LTE+ + Q + +E+ L
Sbjct: 2537 SNQEARTIITDRIERIQSQWDEVQEHLQNRRLQLTEMLKDSTQWLEAKEEAEQVLGQARA 2596
Query: 578 SVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637
+E +++ + + +E + L + + V + LA +K L+ D ++
Sbjct: 2597 KLESWKEAPYTVDAIQKKITETKQLAKDLRQWQINVDVANDLA---LKLLRDYSADDTRK 2653
Query: 638 ITALELLSEELNS-------KLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAK---I 687
+ +++E +N+ +L E+ +++ + + D+EK WL +AE +
Sbjct: 2654 V---HMITENINASWASIHKRLSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVL 2710
Query: 688 QDRTLPPQT---------LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALI 738
QD T + L++ Q L+GE+ D + G ++ + E +++ AL+
Sbjct: 2711 QDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQKVLRSLEGSDDAALL 2770
Query: 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHF-LSLHAEVMKWV 784
Q + + + ++ K + + D WK LSL E++ W+
Sbjct: 2771 QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQ-ELLVWL 2816
>sp|P11531|DMD_MOUSE Dystrophin OS=Mus musculus GN=Dmd PE=1 SV=3
Length = 3678
Score = 46.6 bits (109), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 131/287 (45%), Gaps = 27/287 (9%)
Query: 518 ADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVET 577
++QE+ +I D+IERI QW+ + L RR++L E+ + Q + +E+ + V
Sbjct: 2535 SNQEARTIITDRIERIQIQWDEVQEQLQNRRQQLNEMLKDSTQWLEAKEEAEQVIGQVRG 2594
Query: 578 SVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637
++ H++ + + +E + L + + V + LA +K L+ D ++
Sbjct: 2595 KLDSWKEGPHTVDAIQKKITETKQLAKDLRQRQISVDVANDLA---LKLLRDYSADDTRK 2651
Query: 638 ITALELLSEELNS-------KLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEA----- 685
+ +++E +N+ ++ E+ +++ + + D+EK +W+ +AE
Sbjct: 2652 V---HMITENINTSWGNIHKRVSEQEAALEETHRLLQQFPLDLEKFLSWITEAETTANVL 2708
Query: 686 -------KIQDRTLPPQTLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALI 738
K+ + + + L++ Q L+GE+ D + G +I + E ++E L+
Sbjct: 2709 QDASRKEKLLEDSRGVRELMKPWQDLQGEIETHTDIYHNLDENGQKILRSLEGSDEAPLL 2768
Query: 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHF-LSLHAEVMKWV 784
Q + + + +++ K + + D WK LSL E++ W+
Sbjct: 2769 QRRLDNMNFKWSELQKKSLNIRSHLEASSDQWKRLHLSLQ-ELLVWL 2814
Score = 42.0 bits (97), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 66/305 (21%), Positives = 132/305 (43%), Gaps = 26/305 (8%)
Query: 498 KENQSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQ 557
KE Q+ + L+D KE+ KA E Q + E I W L L +KL E +
Sbjct: 992 KEQQNGFNYLSDTVKEMAKKAPSEICQKYLSEFEEIEGHWKKLSSQLVESCQKLEEHMNK 1051
Query: 558 WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQIS 617
+ + + + ++ + V+ +++ + +L + + L+G +++ +P ++ ++
Sbjct: 1052 LRKFQNHIKTLQKWMAEVDVFLKEEWPALGDAEILKKQLKQCRLLVGDIQTIQPSLNSVN 1111
Query: 618 TLAAPIVKFLKKDGLDLQKRITALELLSEELNSKLEEKGKEVQKAKAMRAAYL------- 670
K + L+ R LE ELN++ + ++V K A L
Sbjct: 1112 EGGQ---KIKSEAELEFASR---LETELRELNTQWDHICRQVYTRKEALKAGLDKTVSLQ 1165
Query: 671 TDVEKIGTWLQDAEAKIQDRTL---PP---QTLIQFIQQLEGELIDMKDKLAQMTRTGNE 724
D+ ++ W+ AE + +R P QT ++ +++ + E + + K+ +T T N
Sbjct: 1166 KDLSEMHEWMTQAEEEYLERDFEYKTPDELQTAVEEMKRAKEEALQKETKVKLLTETVNS 1225
Query: 725 ISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKK---EVTGCDDAWKHFLSLHAEVM 781
+ H + + AL + + + T Q + +LN + K EV C W LS +
Sbjct: 1226 VIAHAPPSAQEAL-KKELETLTTNYQWLCTRLNGKCKTLEEVWAC---WHELLSYLEKAN 1281
Query: 782 KWVSE 786
KW++E
Sbjct: 1282 KWLNE 1286
>sp|Q5GN48|DMD_PIG Dystrophin OS=Sus scrofa GN=DMD PE=1 SV=1
Length = 3674
Score = 45.8 bits (107), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 61/287 (21%), Positives = 128/287 (44%), Gaps = 27/287 (9%)
Query: 518 ADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVET 577
++QE+ +I D+IERI QW+ + L RR++L E+ + Q + +E+ L
Sbjct: 2531 SNQEARTIITDRIERIQSQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA 2590
Query: 578 SVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637
+E +++ + + +E + L + + V + LA +K L+ D ++
Sbjct: 2591 KLESWKEGPYTMDAIQRKITETKQLAKDLRQWQINVDVANDLA---LKLLRDYSADDTRK 2647
Query: 638 ITALELLSEELNS-------KLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAK---I 687
+ +++E +N+ +L E+ +++ + + D+EK WL +AE +
Sbjct: 2648 V---HMITENINASWANIHKRLSERETVLEETHRLLQQFPLDLEKFLAWLTEAETTANVL 2704
Query: 688 QDRTLPPQT---------LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALI 738
QD T + L++ Q L+GE+ D + G +I + E +++ L+
Sbjct: 2705 QDATHKERLLEDSKGVRELMKQWQDLQGEIEAHTDIYHNLDENGQKILRSLEGSDDAILL 2764
Query: 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHF-LSLHAEVMKWV 784
Q + + + ++ K + + D WK LSL E++ W+
Sbjct: 2765 QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQ-ELLVWL 2810
>sp|P11532|DMD_HUMAN Dystrophin OS=Homo sapiens GN=DMD PE=1 SV=3
Length = 3685
Score = 43.9 bits (102), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 128/287 (44%), Gaps = 27/287 (9%)
Query: 518 ADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVET 577
++QE+ +I D+IERI +QW+ + L RR++L E+ + Q + +E+ L
Sbjct: 2542 SNQEARTIITDRIERIQNQWDEVQEHLQNRRQQLNEMLKDSTQWLEAKEEAEQVLGQARA 2601
Query: 578 SVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637
+E +++ + + +E + L + + V + LA +K L+ D ++
Sbjct: 2602 KLESWKEGPYTVDAIQKKITETKQLAKDLRQWQTNVDVANDLA---LKLLRDYSADDTRK 2658
Query: 638 ITALELLSEELNS-------KLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAK---I 687
+ +++E +N+ ++ E+ +++ + + D+EK WL +AE +
Sbjct: 2659 V---HMITENINASWRSIHKRVSEREAALEETHRLLQQFPLDLEKFLAWLTEAETTANVL 2715
Query: 688 QDRTLPPQT---------LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALI 738
QD T + L++ Q L+GE+ D + +I + E +++ L+
Sbjct: 2716 QDATRKERLLEDSKGVKELMKQWQDLQGEIEAHTDVYHNLDENSQKILRSLEGSDDAVLL 2775
Query: 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHF-LSLHAEVMKWV 784
Q + + + ++ K + + D WK LSL E++ W+
Sbjct: 2776 QRRLDNMNFKWSELRKKSLNIRSHLEASSDQWKRLHLSLQ-ELLVWL 2821
>sp|Q6ZWR6|SYNE1_MOUSE Nesprin-1 OS=Mus musculus GN=Syne1 PE=1 SV=2
Length = 8799
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 62/111 (55%), Gaps = 3/111 (2%)
Query: 41 DHRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEH 100
+H + + EL W++ A + S + SDK +++ + LE+LL+ + + E+ ++
Sbjct: 3279 EHNRFSQGVKELQDWMSDAVHMLDSYCLPT-SDKSVLDSRMLKLEALLSVRQEKEIQMKM 3337
Query: 101 MQTTGEVVLASTSPDGQTAVKNEMKALNMKMHWIDLLNKLEHEKNRLGAAI 151
+ T GE VL STS +G AV+ +++A+ K W LL+ K++L A+
Sbjct: 3338 VVTRGEYVLQSTSLEGSAAVQQQLQAV--KDMWESLLSAAIRCKSQLEGAL 3386
Score = 41.2 bits (95), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 32/148 (21%), Positives = 74/148 (50%), Gaps = 3/148 (2%)
Query: 4 SGQQSQAATQAKQILDQFDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLTRARDKI 63
S + ++ Q+L + +LL K L + K+H +EA + + +D++
Sbjct: 2586 SHSAGKGGCRSTQLLTSYQSLLRVTKEKLRSCQLALKEHEALEEATQSMWARVKDVQDRL 2645
Query: 64 PSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKNE 123
+ + +L +K +E ++ ++ +L K +GE+ + G+ L S++ +GQ A++++
Sbjct: 2646 -ACAESTLGNKETLEGRLSQIQDILLMKGEGEVKLNLAIGKGDQALRSSNKEGQQAIQDQ 2704
Query: 124 MKALNMKMHWIDLLNKLEHEKNRLGAAI 151
++ L K W + +N H ++ L + I
Sbjct: 2705 LEML--KKAWAEAMNSAVHAQSTLESVI 2730
Score = 36.2 bits (82), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 2/119 (1%)
Query: 20 QFDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIEN 79
QF ++ K + ED KDH +Y +A E WL A++++ S D A +
Sbjct: 2818 QFQDIMTVAKEKMRTVEDLVKDHLMYLDAVQEFADWLHSAKEELHRWSDTS-GDPSATQK 2876
Query: 80 IVAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKNEMKALNMKMH-WIDLL 137
+ ++ L++ + G + +++ V +T+ G + +EM+AL W D L
Sbjct: 2877 KLLKIKELIDSREIGAGRLSRVESLAPAVKQNTAASGCELLNSEMQALRADWRQWEDCL 2935
Score = 34.7 bits (78), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 68/340 (20%), Positives = 152/340 (44%), Gaps = 52/340 (15%)
Query: 512 KEIKPKADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERT 571
K++ AD ++ ++ ++ I ++W L+ +++KL L + WE+ E+ +++S
Sbjct: 7632 KQLLLSADSGAEAALQAELTDIQEKWKAASMHLEEQKKKLAFLLKDWEKCERGIANSLEK 7691
Query: 572 LKGVETSVEQCDGVVH-SLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKD 630
L+ + + Q H L ELE+ +G + ++++ + + +L +
Sbjct: 7692 LRMFKKRLSQPLPDHHEELHAEQMRCKELENAVGRWTDD---LTELMLVRDALAVYLSAE 7748
Query: 631 GLD-LQKRITALELLSEELNSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKI-Q 688
+ L++R+ L+ EEL ++ + ++V + A + +++ WL E+K+ Q
Sbjct: 7749 DISMLKERVELLQRQWEELCHQVSLRRQQVSERLNEWAVFSEKNKELCEWLTQMESKVSQ 7808
Query: 689 DRTLPPQTLIQFIQQ-LEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTE 747
+ + + +I+ +++ + E+ ++ Q+ G +++ S+E +A
Sbjct: 7809 NGDILIEEMIEKLKKDYQEEIAVAQENKIQLQEMGERLAK--ASHESKA----------- 7855
Query: 748 QMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMK---------------------WVSE 786
+I+ KL+ K D W+H L L A +K W++
Sbjct: 7856 --SEIQYKLSRVK-------DRWQHLLDLMAARVKKLKETLVAVQQLDKNMGSLRTWLAH 7906
Query: 787 KRTFLSEP--YDSNNLSDLRVKLNSYTELTSFVNKHTRKV 824
+ L++P YDS N +++ KLN EL + KH+ V
Sbjct: 7907 MESELAKPIVYDSCNSEEIQRKLNEQQELQRDIEKHSTGV 7946
Score = 33.9 bits (76), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 84/174 (48%), Gaps = 26/174 (14%)
Query: 277 INQAIGKKDSQQKV--IESYKADVNELDKQLDAISLIEGTINQAIGKKDSQQKVIESYKA 334
I AIG K + + + +K D+N KQL A +NQ++ + SQ +ES ++
Sbjct: 6940 IRNAIGYKAIHEYLQKYKGFKIDLN--CKQLTA-----DFVNQSVLQISSQD--VESKRS 6990
Query: 335 DVNDLDKQLDAISKKLDSVEHGQGVLCPVKANTLKDISNTLENSLQTPLEQLQDKAGQVK 394
D D +QL A++K ++ G + L+ S ENS+Q+ +K
Sbjct: 6991 DKTDFAEQLGAMNKSWQLLQGRVGEKIQMLEGLLESWSE-YENSVQS-----------LK 7038
Query: 395 ALLSNLDAQFVDEQKLLDEINLWKNSQSDEDLAHLADSIKPLDEVVERIENNAV 448
A +N + + + EQ LL + N +N+ +D L D IK ++ VE+IE N +
Sbjct: 7039 AWFANQERK-LKEQHLLGDRNSVENAL--KDCQELEDLIKAKEKEVEKIEQNGL 7089
Score = 33.5 bits (75), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 29/119 (24%), Positives = 58/119 (48%), Gaps = 1/119 (0%)
Query: 21 FDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIENI 80
+DT+L K L + E + +KE D+ WL +A D + + +++K +
Sbjct: 4541 YDTVLQKCSHRLQELEKSLVSRKHFKEDFDKACHWLKQA-DIVTFPEINLMNEKTELHAQ 4599
Query: 81 VAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKNEMKALNMKMHWIDLLNK 139
+ +S+L + + E L+ +QTTG+ +L S + + + ++ AL + + I L K
Sbjct: 4600 LDKYQSILEQSPEYENLLLTLQTTGQAMLPSLNEVDHSYLSEKLSALPQQFNVIVALAK 4658
>sp|Q91ZU6|DYST_MOUSE Dystonin OS=Mus musculus GN=Dst PE=1 SV=1
Length = 7389
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 114/598 (19%), Positives = 265/598 (44%), Gaps = 80/598 (13%)
Query: 287 QQKVIESYKADVNELDKQLDAISLIEGTINQAIGKKDSQQKVIESYKADVNDLDKQLDAI 346
QQ+ E+ + +++ L ++LD + + + A G+ D K I K +++L+ D++
Sbjct: 6015 QQEAAEAIREEIDGLQEELDMVITLGSELIAACGEPD---KPI--VKKSIDELNSAWDSL 6069
Query: 347 SK----KLDSVEHG-----------QGVL--CPVKANTLKDISNTLENSLQTPLEQLQDK 389
+K ++D +E QG+ + + L +S + T LE ++ +
Sbjct: 6070 NKAWKDRVDRLEEAMQAAVQYQDGLQGIFDWVDIAGDKLATMS-----PIGTDLETVKQQ 6124
Query: 390 AGQVKALLSNLDAQFVDEQKLLDEINLWKNSQSDEDLAH-LADSIKPL----DEVVERIE 444
++K S Q ++ ++L + L ++E H + D + L D + ERI
Sbjct: 6125 IEELKQFKSEAYQQQMEMERLNHQAELLLKKVTEEADKHTVQDPLMELKLIWDSLDERIV 6184
Query: 445 NNAVPKLKSLLLLREQFTTLIMQIVGFITETTARVGE---VDGNSATVQEKIDKYDK--- 498
+ KL+ LL QF + +++ ++T T + E V G+ ++ ++ K+
Sbjct: 6185 SRQ-HKLEGTLLALGQFQHALDELLAWLTHTKGLLSEQKPVGGDPKAIEIELAKHHVLQN 6243
Query: 499 ---ENQSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELA 555
+QS ++ +N ++ ++ E ++ ++ +N +W ++ D R+++L
Sbjct: 6244 DVLAHQSTVEAVNKAGNDLIESSEGEEASNLQYKLRILNQRWQDILEKTDQRKQQLDSAL 6303
Query: 556 EQW-------EQLEKLMSSSER------TLKGV-ETSVEQCDGVVHSLAVLTQNKSELES 601
Q E L++ ++ +ER L G+ ET+ EQ + + + +S
Sbjct: 6304 RQAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNAHMEVCTAFAIKEETYKS 6363
Query: 602 LLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEELNSKLEEKGKEVQK 661
L+ + Q+ + + + ++ + IT L+ E + SKL EK ++++
Sbjct: 6364 LM-------LRGQQM------LARCPRSAETNIDQDITNLKEKWESVKSKLNEKKTKLEE 6410
Query: 662 AKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLE------GELIDMKDKL 715
A + + ++ WL AE + + P L + Q++ E+ ++++
Sbjct: 6411 ALHLAMNFHNSLQDFINWLTQAEQTLNVASRPSLILDTILFQIDEHKVFANEVNSHREQI 6470
Query: 716 AQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLS 775
++ +TG + ++ ++ LI++ ++S + +++ +L ER + + K F
Sbjct: 6471 IELDKTGTHL-KYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDEARKRAKQFHE 6529
Query: 776 LHAEVMKWVSE-KRTFLSEPYDSNNLSDLRVKLNSYTEL-TSFVNKHTRKVKDLSKNT 831
+++M+W+ E +++ SE +N+ ++ +L + E S KH+ V D + T
Sbjct: 6530 AWSKLMEWLEESEKSLDSELEIANDPDKIKAQLVQHKEFQKSLGGKHS--VYDTTNRT 6585
>sp|Q00963|SPTCB_DROME Spectrin beta chain OS=Drosophila melanogaster GN=beta-Spec PE=1 SV=2
Length = 2291
Score = 42.7 bits (99), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 102/224 (45%), Gaps = 38/224 (16%)
Query: 489 VQEKIDKYDKE---NQSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNTL----- 540
++ + + +DKE N S + ++N + +++ SD+++E Q +N +W+TL
Sbjct: 884 MKHRFEGFDKEMNANASRVAVVNQLARQLLHVEHPNSDEILERQ-NHLNQEWSTLREKAE 942
Query: 541 --VGDLDTRREKLTELAE-----QW-EQLEKLMS---SSERTLKGVETSVEQCDGVVHSL 589
+ DL + T E W E +++++ S E L GV T + G+ L
Sbjct: 943 AKMDDLKSAHGVQTFYIECRETISWIEDKKRILTETDSLEMDLTGVMTLQRRLSGMDRDL 1002
Query: 590 AVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEELN 649
A + S LE ++E E P+ ++I +++RI +EL+ E+L
Sbjct: 1003 AAIQAKLSSLEREANSIEDEHPEEAKI-----------------IRERIAQIELIWEQLT 1045
Query: 650 SKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP 693
L+E+ ++++A + +L D++ TWL + + P
Sbjct: 1046 QMLKERDSKLEEAGDLH-RFLRDLDHFQTWLTKTQTDVASEDTP 1088
>sp|Q03001|DYST_HUMAN Dystonin OS=Homo sapiens GN=DST PE=1 SV=4
Length = 7570
Score = 41.6 bits (96), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 82/417 (19%), Positives = 191/417 (45%), Gaps = 48/417 (11%)
Query: 437 DEVVERIENNAVPKLKSLLLLREQFTTLIMQIVGFITETTARVGE---VDGNSATVQEKI 493
D + ERI N KL+ LL QF + +++ ++T T + E V G+ ++ ++
Sbjct: 6359 DSLEERIINRQ-HKLEGALLALGQFQHALDELLAWLTHTEGLLSEQKPVGGDPKAIEIEL 6417
Query: 494 DKYDK------ENQSEIDMLNDVWKE-IKPKADQESDQLIEDQIERINDQWNTLVGDLDT 546
K+ +QS ++ +N + I+ A +E+ L ++++E +N +W ++ +
Sbjct: 6418 AKHHVLQNDVLAHQSTVEAVNKAGNDLIESSAGEEASNL-QNKLEVLNQRWQNVLEKTEQ 6476
Query: 547 RREKLTELAEQ-------WEQLEKLMSSSER------TLKGV-ETSVEQCDGVVHSLAVL 592
R+++L Q E L++ ++ +ER L G+ ET+ EQ + + A
Sbjct: 6477 RKQQLDGALRQAKGFHGEIEDLQQWLTDTERHLLASKPLGGLPETAKEQLNVHMEVCAAF 6536
Query: 593 TQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEELNSKL 652
+ +SL+ K Q+ + + K ++ + I L+ E + +KL
Sbjct: 6537 EAKEETYKSLM-------QKGQQM------LARCPKSAETNIDQDINNLKEKWESVETKL 6583
Query: 653 EEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLE------G 706
E+ ++++A + + ++ WL AE + + P L + Q++
Sbjct: 6584 NERKTKLEEALNLAMEFHNSLQDFINWLTQAEQTLNVASRPSLILDTVLFQIDEHKVFAN 6643
Query: 707 ELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGC 766
E+ ++++ ++ +TG + ++ ++ LI++ ++S + +++ +L ER + +
Sbjct: 6644 EVNSHREQIIELDKTGTHL-KYFSQKQDVVLIKNLLISVQSRWEKVVQRLVERGRSLDDA 6702
Query: 767 DDAWKHFLSLHAEVMKWVSE-KRTFLSEPYDSNNLSDLRVKLNSYTEL-TSFVNKHT 821
K F +++M+W+ E +++ SE +N+ ++ +L + E S KH+
Sbjct: 6703 RKRAKQFHEAWSKLMEWLEESEKSLDSELEIANDPDKIKTQLAQHKEFQKSLGAKHS 6759
Score = 34.3 bits (77), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 4/116 (3%)
Query: 674 EKIGTWLQDAEAKIQDRTLPPQT---LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTE 730
EK+ T+L+ + + +P + L Q++Q+ E ++ K L + EIS H
Sbjct: 4276 EKLQTFLETKTQALTEVDVPGKDVTELSQYMQESTSEFLEHKKHLEVLHSLLKEISSHGL 4335
Query: 731 SNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSE 786
++ +AL+ + +++ +++E + E+K+ VT C + F L + W+ E
Sbjct: 4336 PSD-KALVLEKTNNLSKKFKEMEDTIKEKKEAVTSCQEQLDAFQVLVKSLKSWIKE 4390
>sp|Q8NF91|SYNE1_HUMAN Nesprin-1 OS=Homo sapiens GN=SYNE1 PE=1 SV=4
Length = 8797
Score = 41.2 bits (95), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 69/319 (21%), Positives = 144/319 (45%), Gaps = 52/319 (16%)
Query: 533 INDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVL 592
I ++W + L+ +++KL L + WE+ EK ++ S L+ + + Q H
Sbjct: 7650 IQEKWKSASMRLEEQKKKLAFLLKDWEKCEKGIADSLEKLRTFKKKLSQSLPDHHEELHA 7709
Query: 593 TQNKS-ELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLD-LQKRITALELLSEELNS 650
Q + ELE+ +G+ + ++Q+S L + ++ D + L +R+ L+ EEL
Sbjct: 7710 EQMRCKELENAVGSWTDD---LTQLSLLKDTLSAYISADDISILNERVELLQRQWEELCH 7766
Query: 651 KLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKI-QDRTLPPQTLIQFIQQ-LEGEL 708
+L + +++ + A + +++ WL E+K+ Q+ + + +I+ +++ + E+
Sbjct: 7767 QLSLRRQQIGERLNEWAVFSEKNKELCEWLTQMESKVSQNGDILIEEMIEKLKKDYQEEI 7826
Query: 709 IDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDD 768
++ Q+ + G +++ S+E +A +IE KL + +D
Sbjct: 7827 AIAQENKIQLQQMGERLAK--ASHESKA-------------SEIEYKLGK-------VND 7864
Query: 769 AWKHFLSLHAEVMK---------------------WVSEKRTFLSEP--YDSNNLSDLRV 805
W+H L L A +K W++ + L++P YDS N +++
Sbjct: 7865 RWQHLLDLIAARVKKLKETLVAVQQLDKNMSSLRTWLAHIESELAKPIVYDSCNSEEIQR 7924
Query: 806 KLNSYTELTSFVNKHTRKV 824
KLN EL + KH+ V
Sbjct: 7925 KLNEQQELQRDIEKHSTGV 7943
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 3 ASGQQSQAATQAKQILDQFDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLTRARDK 62
+GQ+ + +Q +L LL K L + ++H +EA + W+ +D+
Sbjct: 2590 GAGQEGRLCSQ---LLTSHQNLLRMTKEKLRSCQVALQEHEALEEALQSMWFWVKAIQDR 2646
Query: 63 IPSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKN 122
+ + + +L K +E ++ ++ +L K +GE+ + GE L S++ +GQ ++
Sbjct: 2647 L-ACAESTLGSKDTLEKRLSQIQDILLMKGEGEVKLNMAIGKGEQALRSSNKEGQRVIQT 2705
Query: 123 EMKALNMKMHWIDLLNKLEHEKNRLGAAI 151
+++ L K W D+++ H ++ L + I
Sbjct: 2706 QLETL--KEVWADIMSSSVHAQSTLESVI 2732
Score = 35.0 bits (79), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 52/108 (48%), Gaps = 1/108 (0%)
Query: 20 QFDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIEN 79
QF+ ++ K + E+ KDH +Y +A E WL A++++ S D A +
Sbjct: 2820 QFNDIMTVAKEKMRKVEEIVKDHLMYLDAVHEFTDWLHSAKEELHRWSDMS-GDSSATQK 2878
Query: 80 IVAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKNEMKAL 127
++ ++ L++ + G + +++ V +T+ G + EM+AL
Sbjct: 2879 KLSKIKELIDSREIGASRLSRVESLAPEVKQNTTASGCELMHTEMQAL 2926
>sp|Q9QXZ0|MACF1_MOUSE Microtubule-actin cross-linking factor 1 OS=Mus musculus GN=Macf1
PE=1 SV=2
Length = 7354
Score = 38.9 bits (89), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 97/193 (50%), Gaps = 14/193 (7%)
Query: 631 GLDLQKRITALELLSEELNSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDR 690
G ++ + LE ++SK+EE+ ++++A ++ + +++ WL AE +
Sbjct: 6365 GSKTEQSVALLEQKWHAVSSKVEERKSKLEEALSLATEFQNSLQEFINWLTLAEQSLNIA 6424
Query: 691 TLPPQTLIQFIQQLE------GELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILS 744
+ P L + Q+E E+ D +D++ ++ +TGN++ + ++ LI++ ++S
Sbjct: 6425 SPPSLILNTVLSQIEEHKVFANEVNDHRDQIIELDQTGNQL-KFLSQKQDVVLIKNLLVS 6483
Query: 745 FTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLH---AEVMKWVSEKRTFL-SEPYDSNNL 800
+ +++ + ER + + DDA K H +++ W+ + + L SE SN+
Sbjct: 6484 VQSRWEKVVQRSIERGRSL---DDARKRAKQFHEAWKKLIDWLEDAESHLDSELEISNDP 6540
Query: 801 SDLRVKLNSYTEL 813
++++L+ + E
Sbjct: 6541 DKIKLQLSKHKEF 6553
>sp|D3ZHV2|MACF1_RAT Microtubule-actin cross-linking factor 1 OS=Rattus norvegicus
GN=Macf1 PE=1 SV=1
Length = 5430
Score = 37.0 bits (84), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 70/394 (17%), Positives = 176/394 (44%), Gaps = 43/394 (10%)
Query: 450 KLKSLLLLREQFTTLIMQIVGFITETTARVG---EVDGNSATVQEKIDKYDK------EN 500
KL+ LL QF + +++G++T T + + G+ ++ ++ K+ +
Sbjct: 4259 KLEGALLALGQFQHALEELMGWLTHTEELLDAQRPISGDPKVIEVELAKHHVLKNDVLAH 4318
Query: 501 QSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWE- 559
Q+ ++ +N E+ + + + ++E +N W +++ + R ++L +Q +
Sbjct: 4319 QATVETVNKAGNELLESSAGDDASSLRSRLETMNQCWESVLQKTEEREQQLQSTLQQAQG 4378
Query: 560 -------------QLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTV 606
++E +S+S+ T ET+ EQ D + + L + LL
Sbjct: 4379 FHSEIEEFLLELNRMESQLSASKPTGGLPETAREQLDAHMELHSQLRAKEEIYNQLL--- 4435
Query: 607 ESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEELNSKLEEKGKEVQKAKAMR 666
+K ++ +S + G ++ + LE ++SK+EE+ ++++A ++
Sbjct: 4436 --DKGRLMLLS-------RGDSGSGSKTEQSVALLEQKWHVVSSKVEERKSKLEEALSLA 4486
Query: 667 AAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLE------GELIDMKDKLAQMTR 720
+ +++ WL AE + + P L + Q+E E+ +D++ ++ +
Sbjct: 4487 TEFQNSLQEFINWLTLAEQSLNIASPPSLILNTVLSQIEEHKVFANEVNAHRDQIIELDQ 4546
Query: 721 TGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEV 780
TGN++ + ++ LI++ ++S + +++ + ER + + K F ++
Sbjct: 4547 TGNQL-KFLSQKQDVVLIKNLLVSVQSRWEKVVQRSIERGRSLDDARKRAKQFHEAWKKL 4605
Query: 781 MKWVSEKRTFL-SEPYDSNNLSDLRVKLNSYTEL 813
+ W+ + + L SE SN+ ++++L+ + E
Sbjct: 4606 IDWLEDAESHLDSELEISNDPDKIKLQLSKHKEF 4639
>sp|Q9UPN3|MACF1_HUMAN Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5 OS=Homo
sapiens GN=MACF1 PE=1 SV=4
Length = 7388
Score = 35.4 bits (80), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 78/168 (46%), Gaps = 15/168 (8%)
Query: 45 YKEACDELLTWLTRARDKIPSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTT 104
++ A +EL++WLT + + + + S D IE +A L N + VE +
Sbjct: 6228 FQHALEELMSWLTHTEELLDAQRPIS-GDPKVIEVELAKHHVLKNDVLAHQATVETVNKA 6286
Query: 105 GEVVLASTSPDGQTAVKNEMKALNMKMHWIDLLNKLEHEKNRLGAAIQAGEAATACI--- 161
G +L S++ D +++++ ++A+N W +L K E + +L + +Q + + I
Sbjct: 6287 GNELLESSAGDDASSLRSRLEAMN--QCWESVLQKTEEREQQLQSTLQQAQGFHSEIEDF 6344
Query: 162 ----SRPSSPLESAHP----PVPDRE-IAIRLRLEDQIEQVESKLSQL 200
+R S L ++ P P RE + + L Q++ E +QL
Sbjct: 6345 LLELTRMESQLSASKPTGGLPETAREQLDTHMELYSQLKAKEETYNQL 6392
Score = 35.0 bits (79), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 89/176 (50%), Gaps = 14/176 (7%)
Query: 648 LNSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLE-- 705
++SK+EE+ ++++A + + +++ WL AE + + P L + Q+E
Sbjct: 6426 VSSKMEERKSKLEEALNLATEFQNSLQEFINWLTLAEQSLNIASPPSLILNTVLSQIEEH 6485
Query: 706 ----GELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKK 761
E+ +D++ ++ +TGN++ + ++ LI++ ++S + +++ + ER +
Sbjct: 6486 KVFANEVNAHRDQIIELDQTGNQL-KFLSQKQDVVLIKNLLVSVQSRWEKVVQRSIERGR 6544
Query: 762 EVTGCDDAWKHFLSLH---AEVMKWVSEKRTFL-SEPYDSNNLSDLRVKLNSYTEL 813
+ DDA K H +++ W+ + + L SE SN+ ++++L+ + E
Sbjct: 6545 SL---DDARKRAKQFHEAWKKLIDWLEDAESHLDSELEISNDPDKIKLQLSKHKEF 6597
Score = 33.1 bits (74), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 30/131 (22%), Positives = 55/131 (41%), Gaps = 23/131 (17%)
Query: 13 QAKQILDQFDTLLGKVKSLLADREDQYKDHRVYKEACDELLTWLT------RARDKIPSM 66
Q +++ ++DT+ S + E K V+++ LL WL+ R R +P
Sbjct: 6742 QLQELSTRWDTVCKLSVSKQSRLEQALKQAEVFRDTVHMLLEWLSEAEQTLRFRGALPD- 6800
Query: 67 KQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTTGEVVLASTSPDGQTAVKNEMKA 126
D A+++++ + + K + + V GEV+LA PD T +K
Sbjct: 6801 ------DTEALQSLIDTHKEFMKKVEEKRVDVNSAVAMGEVILAVCHPDCITTIK----- 6849
Query: 127 LNMKMHWIDLL 137
HWI ++
Sbjct: 6850 -----HWITII 6855
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.310 0.127 0.339
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 282,937,916
Number of Sequences: 539616
Number of extensions: 11507161
Number of successful extensions: 55061
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 1975
Number of HSP's that attempted gapping in prelim test: 47563
Number of HSP's gapped (non-prelim): 5771
length of query: 849
length of database: 191,569,459
effective HSP length: 126
effective length of query: 723
effective length of database: 123,577,843
effective search space: 89346780489
effective search space used: 89346780489
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 66 (30.0 bits)