Query psy4475
Match_columns 849
No_of_seqs 286 out of 768
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 18:05:12 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4475.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4475hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edv_A Spectrin beta chain, br 99.9 5.9E-24 2E-28 231.3 41.9 297 458-764 8-322 (323)
2 3kbt_A Beta-I spectrin, spectr 99.9 4E-24 1.4E-28 233.0 37.4 303 458-768 6-324 (326)
3 1u4q_A Spectrin alpha chain, b 99.9 3.6E-23 1.2E-27 225.0 42.1 301 458-767 5-321 (322)
4 1hci_A Alpha-actinin 2; triple 99.9 1.6E-22 5.5E-27 232.2 39.8 374 453-833 8-434 (476)
5 1hci_A Alpha-actinin 2; triple 99.9 2.1E-21 7.2E-26 222.9 42.0 418 327-767 11-472 (476)
6 3edv_A Spectrin beta chain, br 99.9 8.1E-21 2.8E-25 206.5 36.2 274 557-837 7-292 (323)
7 1u4q_A Spectrin alpha chain, b 99.9 1.7E-20 6E-25 203.8 38.0 273 557-837 4-288 (322)
8 1sjj_A Actinin; 3-helix bundle 99.9 2.4E-19 8.2E-24 220.7 35.8 373 457-835 251-676 (863)
9 3kbt_A Beta-I spectrin, spectr 99.9 7.1E-19 2.4E-23 191.4 35.0 268 558-833 6-284 (326)
10 3r6n_A Desmoplakin; spectrin r 99.8 5.7E-17 1.9E-21 179.9 32.9 248 563-833 9-270 (450)
11 1sjj_A Actinin; 3-helix bundle 99.8 6.9E-17 2.4E-21 198.8 35.3 306 455-764 369-708 (863)
12 3r6n_A Desmoplakin; spectrin r 99.8 8.4E-16 2.9E-20 170.5 38.7 333 462-812 8-415 (450)
13 1u5p_A Spectrin alpha chain, b 99.8 1.6E-16 5.3E-21 162.0 26.4 203 558-767 5-215 (216)
14 3edu_A Beta-I spectrin, spectr 99.7 2.8E-16 9.5E-21 160.2 24.6 206 559-770 4-217 (218)
15 1cun_A Protein (alpha spectrin 99.7 2.3E-15 7.8E-20 153.0 29.4 202 559-767 3-212 (213)
16 1s35_A Beta-I spectrin, spectr 99.7 2.2E-15 7.5E-20 153.2 26.5 203 559-767 3-213 (214)
17 1cun_A Protein (alpha spectrin 99.7 1.7E-14 5.8E-19 146.5 28.4 200 458-663 2-212 (213)
18 1quu_A Human skeletal muscle a 99.7 7E-15 2.4E-19 153.1 23.8 216 546-768 7-243 (250)
19 3edu_A Beta-I spectrin, spectr 99.7 2.5E-15 8.6E-20 153.1 19.0 200 459-665 4-216 (218)
20 1s35_A Beta-I spectrin, spectr 99.7 1.5E-14 5.1E-19 147.1 24.5 200 459-663 3-213 (214)
21 1u5p_A Spectrin alpha chain, b 99.7 2.3E-14 7.8E-19 145.9 25.9 200 458-663 5-215 (216)
22 1quu_A Human skeletal muscle a 99.6 1.3E-14 4.6E-19 151.0 22.9 214 450-665 8-244 (250)
23 3pdy_A Plectin; cytoskeleton, 99.6 1.1E-13 3.6E-18 139.8 25.2 190 563-765 12-209 (210)
24 2iak_A Bullous pemphigoid anti 99.6 8.1E-15 2.8E-19 149.8 15.1 193 560-765 24-224 (224)
25 3fb2_A Spectrin alpha chain, b 99.6 4.2E-13 1.4E-17 136.6 23.3 195 558-760 15-218 (218)
26 3fb2_A Spectrin alpha chain, b 99.5 2.7E-13 9.3E-18 138.0 20.9 169 666-837 15-192 (218)
27 3lbx_B Beta-I spectrin, spectr 99.5 5.3E-13 1.8E-17 132.0 22.3 160 666-828 6-173 (185)
28 3pe0_A Plectin; cytoskeleton, 99.5 2.6E-12 8.8E-17 134.9 20.8 176 658-837 3-190 (283)
29 3lbx_A Spectrin alpha chain, e 99.4 2.5E-12 8.4E-17 123.6 14.4 133 632-767 22-161 (161)
30 3pdy_A Plectin; cytoskeleton, 99.4 2.2E-11 7.4E-16 122.8 20.8 187 462-660 11-208 (210)
31 3f31_A Spectrin alpha chain, b 99.3 2.5E-11 8.5E-16 115.2 16.7 130 632-764 12-148 (149)
32 2iak_A Bullous pemphigoid anti 99.3 1.9E-11 6.6E-16 124.7 16.1 191 458-660 22-223 (224)
33 3uul_A Utrophin; spectrin repe 99.3 5.4E-11 1.8E-15 108.2 15.6 106 666-771 4-116 (118)
34 3pe0_A Plectin; cytoskeleton, 99.3 1.2E-10 4E-15 122.3 19.9 161 458-621 10-181 (283)
35 3uun_A Dystrophin; triple heli 99.3 4.8E-11 1.7E-15 108.7 14.5 108 666-773 4-118 (119)
36 3lbx_B Beta-I spectrin, spectr 99.2 3.7E-10 1.3E-14 111.4 20.1 160 458-620 6-173 (185)
37 3lbx_A Spectrin alpha chain, e 99.1 5.5E-10 1.9E-14 107.2 13.8 137 521-663 22-161 (161)
38 3f31_A Spectrin alpha chain, b 99.0 6.4E-09 2.2E-13 98.4 15.1 134 521-660 12-148 (149)
39 3uun_A Dystrophin; triple heli 98.9 7E-09 2.4E-13 94.2 12.7 113 42-157 4-118 (119)
40 3uul_A Utrophin; spectrin repe 98.9 1.3E-08 4.3E-13 92.4 13.2 110 42-154 4-115 (118)
41 2spc_A Spectrin; cytoskeleton; 98.7 1.9E-07 6.5E-12 82.9 12.5 97 666-764 5-106 (107)
42 1g8x_A Myosin II heavy chain f 98.6 4.8E-07 1.7E-11 110.1 15.8 223 547-773 758-1000(1010)
43 2spc_A Spectrin; cytoskeleton; 98.4 5.8E-07 2E-11 79.7 9.1 94 458-552 5-106 (107)
44 2odv_A Plectin 1, HD1; plakin 98.4 8.6E-05 2.9E-09 74.8 25.8 195 558-761 13-225 (235)
45 1g8x_A Myosin II heavy chain f 98.3 2E-06 6.8E-11 104.8 13.7 210 458-672 768-1002(1010)
46 2odv_A Plectin 1, HD1; plakin 98.1 0.00057 1.9E-08 68.8 22.5 185 458-657 13-222 (235)
47 2ycu_A Non muscle myosin 2C, a 97.7 3.5E-06 1.2E-10 102.7 -0.4 129 640-771 844-990 (995)
48 2ycu_A Non muscle myosin 2C, a 97.6 5.9E-06 2E-10 100.8 -1.9 211 452-666 754-989 (995)
49 1wlx_A Alpha-actinin 4; three- 96.1 0.07 2.4E-06 47.5 12.3 108 658-767 6-125 (129)
50 1wlx_A Alpha-actinin 4; three- 94.6 0.66 2.3E-05 41.2 13.2 112 546-663 5-125 (129)
51 1c1g_A Tropomyosin; contractIl 88.9 20 0.00068 35.7 33.7 46 525-570 3-48 (284)
52 1c1g_A Tropomyosin; contractIl 84.2 35 0.0012 33.9 39.9 25 528-552 13-37 (284)
53 3na7_A HP0958; flagellar bioge 61.7 1.3E+02 0.0046 29.9 19.5 83 526-612 30-112 (256)
54 3fx7_A Putative uncharacterize 44.8 76 0.0026 26.3 7.2 55 632-687 27-82 (94)
55 3fx7_A Putative uncharacterize 30.7 2E+02 0.0067 23.8 7.5 56 738-793 25-84 (94)
56 3ghg_A Fibrinogen alpha chain; 26.1 6.8E+02 0.023 27.4 12.9 23 657-680 220-242 (562)
57 3t98_B Nucleoporin NUP58/NUP45 26.0 2.8E+02 0.0095 22.9 9.1 25 665-689 13-37 (93)
58 3na7_A HP0958; flagellar bioge 25.5 4.9E+02 0.017 25.6 21.4 62 659-725 55-116 (256)
59 2yy0_A C-MYC-binding protein; 23.5 1.3E+02 0.0045 22.0 4.8 34 731-764 17-50 (53)
60 3etw_A Adhesin A; antiparallel 23.2 3.7E+02 0.013 23.3 13.0 103 735-837 4-113 (119)
61 3t98_B Nucleoporin NUP58/NUP45 21.9 3.1E+02 0.011 22.6 7.3 51 327-377 12-62 (93)
62 2avr_X Adhesion A; antiparalle 21.0 4E+02 0.014 23.0 13.0 99 735-833 4-106 (119)
63 2v71_A Nuclear distribution pr 20.3 5.4E+02 0.019 24.2 17.9 73 648-723 15-87 (189)
No 1
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.94 E-value=5.9e-24 Score=231.31 Aligned_cols=297 Identities=13% Similarity=0.179 Sum_probs=253.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccc--CCcccHHHHHHHHHHH-------hHHHHHHHHHHHHHhcccCCccChHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEVD--GNSATVQEKIDKYDKE-------NQSEIDMLNDVWKEIKPKADQESDQLIED 528 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~~--~~~~~ve~~~~k~~~~-------~q~el~~v~~~g~~L~~~~~~~~~~~I~~ 528 (849)
..+|.+.+.++..||.+++.++...+ ...+.++..+++|+.| .+..++.|+..|..|+..+ +++.+.|..
T Consensus 8 l~~f~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~~~-~~~~~~i~~ 86 (323)
T 3edv_A 8 LFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELINSG-HSDAATIAE 86 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCcCCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcC-CCChHHHHH
Confidence 47999999999999999999886543 3444677788888866 2346899999999999865 578999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHh
Q psy4475 529 QIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVES 608 (849)
Q Consensus 529 ~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~ 608 (849)
++..|+.+|+.|...+..|...|+.+. ....|...+.++..||.+++..+. .+++.+...++.+.+.++.++.++..
T Consensus 87 ~~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~f~~~~~e~~~Wl~~k~~~l~--~~~~~d~~~v~~l~~~h~~~~~~l~~ 163 (323)
T 3edv_A 87 WKDGLNEAWADLLELIDTRTQILAASY-ELHKFYHDAKEIFGRIQDKHKKLP--EELGRDQNTVETLQRMHTTFEHDIQA 163 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCC--CCCCSSHHHHHHHHHHHHHHHHHTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcc--cccccChHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999988 567799999999999999998884 45677888888888888888888888
Q ss_pred hhhhHHHHHhhhhHHHHHHhhcc-hhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 609 EKPKVSQISTLAAPIVKFLKKDG-LDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAE 684 (849)
Q Consensus 609 l~~~~~~i~~~~~~l~~~~~~~~-~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E 684 (849)
....+..+...+..|.. .+| ++...|...+..++.+| ...+..|...|+.+.. ++.|+.+++++..||.+++
T Consensus 164 ~~~~v~~l~~~a~~L~~---~~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl~~~~ 239 (323)
T 3edv_A 164 LGTQVRQLQEDAARLQA---AYAGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDLMLWMEDVI 239 (323)
T ss_dssp HHHHHHHHHHHHHHHHH---HCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH---hCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 88888888887776544 334 36788999999999999 7889999999999996 4699999999999999999
Q ss_pred HHHhcCCCC--chH---HHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 685 AKIQDRTLP--PQT---LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNER 759 (849)
Q Consensus 685 ~~l~~~~~~--~~~---l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r 759 (849)
..+.+.++. +.. +..+|+.|..||.++.+.|..+...|..|+... ++ .+..|..++..|+.||..|..+|.+|
T Consensus 240 ~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~-~~-~~~~i~~~l~~L~~~w~~l~~~w~~R 317 (323)
T 3edv_A 240 RQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARK-HY-ASEEIKEKLLQLTEKRKEMIDKWEDR 317 (323)
T ss_dssp HHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-CC-chHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999865432 222 236778999999999999999999999999886 54 46799999999999999999999999
Q ss_pred HHHHH
Q psy4475 760 KKEVT 764 (849)
Q Consensus 760 ~~~Le 764 (849)
...|.
T Consensus 318 ~~~L~ 322 (323)
T 3edv_A 318 WEWLR 322 (323)
T ss_dssp HHHHH
T ss_pred HHHhc
Confidence 99885
No 2
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.94 E-value=4e-24 Score=233.01 Aligned_cols=303 Identities=10% Similarity=0.119 Sum_probs=236.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc--ccCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGE--VDGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~--~~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
.++|+.++.++.+||.+++..+.. ++.+.++++..+++|..+ .+..|+.+...|+.|+... +++.+.|..+
T Consensus 6 ~qqf~~~~~el~~Wl~e~~~~l~~~~~g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~~~-~~~~~~i~~~ 84 (326)
T 3kbt_A 6 AQQYYLDADEAEAWIGEQELYVISDEIPKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLSAG-HPEGEQIIRL 84 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCC-CCChHHHHHH
Confidence 589999999999999999998864 344455788888888866 2346889999999999764 4789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|+.|+..+..|+..|+.++ ...+|...+.++..||.+++..+.+.+ +|.+...+..+...++.+..++..+
T Consensus 85 l~~l~~~w~~L~~~~~~R~~~Le~~l-~l~~f~~~~~~l~~Wl~~~e~~l~~~~-~g~d~~~v~~l~~~~~~f~~el~~~ 162 (326)
T 3kbt_A 85 QGQVDKHYAGLKDVAEERKRKLENMY-HLFQLKRETDDLEQWISEKELVASSPE-MGQDFDHVTLLRDKFRDFARETGAI 162 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHcccc-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998 467899999999999999999988755 4778888888888888998888874
Q ss_pred -hhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 610 -KPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEA 685 (849)
Q Consensus 610 -~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~ 685 (849)
.+.+..++..+..|.. ..+++...|...++.++.+| ...+..|...|+.++.. +.|+.+++++..||.+++.
T Consensus 163 ~~~~v~~l~~~~~~L~~---~~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~~-~~f~~~~~e~~~Wl~ek~~ 238 (326)
T 3kbt_A 163 GQERVDNVNAFIERLID---AGHSEAATIAEWKDGLNEMWADLLELIDTRMQLLAASYDL-HRYFYTGAEILGLIDEKHR 238 (326)
T ss_dssp HHHHHHHHHHHHHHHHH---HCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHH---cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHh
Confidence 6778888888876543 34667889999999999999 78899999999999864 5899999999999999999
Q ss_pred HHhcC-CCCchH---HHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 686 KIQDR-TLPPQT---LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKK 761 (849)
Q Consensus 686 ~l~~~-~~~~~~---l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~ 761 (849)
.+... +.++.. +.++|+.|+.+|.++++.|..|...|..|...+ +++.+..|+.++..++.+|..|...+.+|+.
T Consensus 239 ~L~~~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~~~-~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~ 317 (326)
T 3kbt_A 239 ELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQTAY-AGEKAEAIQNKEQEVSAAWQALLDACAGRRT 317 (326)
T ss_dssp C---------------------CHHHHHHHHHHHHHHHHHHHHHHHHC-CTHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred hCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88421 111111 236778999999999999999999999999876 4456789999999999999999999999999
Q ss_pred HHHHHHH
Q psy4475 762 EVTGCDD 768 (849)
Q Consensus 762 ~Le~~l~ 768 (849)
.|+++.+
T Consensus 318 ~L~~a~~ 324 (326)
T 3kbt_A 318 QLVDTAD 324 (326)
T ss_dssp -------
T ss_pred HHHHHHh
Confidence 9999886
No 3
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.94 E-value=3.6e-23 Score=225.05 Aligned_cols=301 Identities=14% Similarity=0.230 Sum_probs=257.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc--ccCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGE--VDGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~--~~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
..+|.+.+.++..||.+++..+.+ ++...++|+..+++|..+ .+..|+.++..|..|+.. ++++...|..+
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~~~-~~~~~~~i~~~ 83 (322)
T 1u4q_A 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTS-SAFDTSQVKDK 83 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHTTC-CSSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCCChHHHHHH
Confidence 478999999999999999999954 344555788888888865 344689999999999974 45889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|..|+..+..|+..|+.+.. +.+|...+.++..||.+++..+.+.++ |.+...++.+.+.++.++.++...
T Consensus 84 ~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~~f~~~~~~~~~Wl~e~e~~~~~~~~-g~dl~~v~~ll~~h~~l~~el~~~ 161 (322)
T 1u4q_A 84 RETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSEDY-GRDLTGVQNLRKKHKRLEAELAAH 161 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCC-CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhccCCCc-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999987 667999999999999999999888655 778888888888888888888888
Q ss_pred hhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 610 KPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAK 686 (849)
Q Consensus 610 ~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~ 686 (849)
.+.+..+...+..|. ...+++...|...+..|+.+| ...+..|...|+.++. +++|+.+++++..||.+++..
T Consensus 162 ~~~i~~l~~~g~~L~---~~~~~~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e~~ 237 (322)
T 1u4q_A 162 EPAIQGVLDTGKKLS---DDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTL 237 (322)
T ss_dssp HHHHHHHHHHHHHHH---HTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
Confidence 777888877777653 233567889999999999999 7889999999999997 469999999999999999999
Q ss_pred HhcCCC--CchH---HHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 687 IQDRTL--PPQT---LIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKK 761 (849)
Q Consensus 687 l~~~~~--~~~~---l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~ 761 (849)
+.+.+. +... +..+|+.|+.+|..+.+.|..+...|..|+..+ +| ++..|..++..|+.||..|...+.+|..
T Consensus 238 l~~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~-~~-~~~~i~~~~~~l~~rw~~l~~~~~~R~~ 315 (322)
T 1u4q_A 238 VASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKN-NH-HVENITAKMKGLKGKVSDLEKAAAQRKA 315 (322)
T ss_dssp HTCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CC-ChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 865432 1111 236778999999999999999999999999987 55 5678999999999999999999999999
Q ss_pred HHHHHH
Q psy4475 762 EVTGCD 767 (849)
Q Consensus 762 ~Le~~l 767 (849)
.|+++.
T Consensus 316 ~L~~a~ 321 (322)
T 1u4q_A 316 KLDENS 321 (322)
T ss_dssp HHTC--
T ss_pred HHhhcc
Confidence 998764
No 4
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.92 E-value=1.6e-22 Score=232.22 Aligned_cols=374 Identities=14% Similarity=0.187 Sum_probs=293.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhccccCC--cccHHHHHHHHHHHhH----HHHH-------HHHHHHHHhcccCC
Q psy4475 453 SLLLLREQFTTLIMQIVGFITETTARVGEVDGN--SATVQEKIDKYDKENQ----SEID-------MLNDVWKEIKPKAD 519 (849)
Q Consensus 453 ~~l~~~~qf~~~~~el~~wl~e~~~~~~~~~~~--~~~ve~~~~k~~~~~q----~el~-------~v~~~g~~L~~~~~ 519 (849)
....+..+|...+.++..||.++...+.+.+.+ .+.+..++..|..+.. ..++ .++..|..|.....
T Consensus 8 e~~~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~~l~~~~~~l~~f~~~~~~~~p~~~~ek~~le~~~~~~~~~l~~~~~ 87 (476)
T 1hci_A 8 ENERLMEEYERLASELLEWIRRTIPWLENRTPEKTMQAMQKKLEDFRDYRRKHKPPKVQEKCQLEINFNTLQTKLRISNR 87 (476)
T ss_dssp HHHHHHHHHHHHHHHHHTHHHHHHHHTTCCCCCSSSTTTTHHHHHHHHHHHHTHHHHHHHHHHTTTHHHHTTTTTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcHHHHHHHHHHHHHHhhccCCHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 444557899999999999999999999764432 2345555655654422 2233 45666666654333
Q ss_pred ccChHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccH
Q psy4475 520 QESDQLIEDQIERINDQWNTLVGDL----------DTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSL 589 (849)
Q Consensus 520 ~~~~~~I~~~l~~L~~~W~~L~~~~----------~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~ 589 (849)
++-.+.+...+..++..|+.|.... ..|..+|+.. +.+|...+.++..||.+++..+.+.+++|++.
T Consensus 88 ~~~~~~~~~~~~~i~~~w~~L~~l~~~r~~~l~~~~~R~~~Le~~---~~~f~~~~~~~~~Wl~e~e~~l~~~~~~g~dl 164 (476)
T 1hci_A 88 PAFMPSEGKMVSDIAGAWQRLEQAEKGYEEWLLNEIRRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASL 164 (476)
T ss_dssp CCCCCCGGGCSSSHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHTTHHHHHHCCGGGSCCH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcCCccCCCH
Confidence 2222234455666777777776665 4555556555 46799999999999999999998877768889
Q ss_pred HHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHH
Q psy4475 590 AVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMR 666 (849)
Q Consensus 590 ~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~ 666 (849)
..++.+.+.++.++.++......+..+...+..|.. ..+++...|..++..++.+| ...+..|...|+.++..+
T Consensus 165 ~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~---~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~~~~~ 241 (476)
T 1hci_A 165 TEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE---LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLL 241 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999889999999999988888888888876543 33577889999999999999 788999999999999877
Q ss_pred H-------HHHHHHHHHHHHHHHHHHHHhcCCC--CchH---HHHHHHHHHHHHHhhHHHHHHH---HHHHhHhhhcCCC
Q psy4475 667 A-------AYLTDVEKIGTWLQDAEAKIQDRTL--PPQT---LIQFIQQLEGELIDMKDKLAQM---TRTGNEISQHTES 731 (849)
Q Consensus 667 ~-------~f~~d~~~l~~WL~e~E~~l~~~~~--~~~~---l~~~lq~Lq~Ei~~~~~~~~~l---~~~g~~L~~~~~~ 731 (849)
+ +|..++.+|..||.+++..+.+... ++.. +..+|+.|..+|..+.+.+..+ ...|..|+..+ +
T Consensus 242 ~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~~~~l~~~~-~ 320 (476)
T 1hci_A 242 ETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSY-N 320 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-T
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C
Confidence 5 8999999999999999999876542 2222 2367789999999999887777 67788888766 3
Q ss_pred h---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhhcCC-C-CCCc
Q psy4475 732 N---EERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDA-------WKHFLSLHAEVMKWVSEKRTFLSEP-Y-DSNN 799 (849)
Q Consensus 732 ~---~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~-------~~~f~~~~~el~~Wl~~~e~~~~~~-~-~~~~ 799 (849)
+ .+...|..++..|+.+|..|...+..|...|+.++.. ++.|...+.++..||.+++..+..+ . .+++
T Consensus 321 ~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~~~~~~~~~~ 400 (476)
T 1hci_A 321 IRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIARSSIQITGA 400 (476)
T ss_dssp CCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSCTTTTS
T ss_pred CCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 3 1344688999999999999999999999999999974 4799999999999999999776543 2 2678
Q ss_pred hHHHHHHHHHHHHHHHHhhHhhHhhhhhhHHHHh
Q psy4475 800 LSDLRVKLNSYTELTSFVNKHTRKVKDLSKNTQE 833 (849)
Q Consensus 800 l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~ 833 (849)
++++..++..|...+......+..|..+|..+..
T Consensus 401 le~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~ 434 (476)
T 1hci_A 401 LEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQE 434 (476)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 8999999999999999999999999999988876
No 5
>1hci_A Alpha-actinin 2; triple-helix coiled coil, contractIle protein, muscle, Z- LINE, actin-binding protein; 2.8A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.91 E-value=2.1e-21 Score=222.88 Aligned_cols=418 Identities=13% Similarity=0.190 Sum_probs=293.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHhcCC-chhH-------HhhHhHHHHHHHhc
Q psy4475 327 KVIESYKADVNDLDKQLDAISKKLDSVEHGQGVLCPVKANTLKDISNTLENSLQ-TPLE-------QLQDKAGQVKALLS 398 (849)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~kl~~l~~e~~~~~~-~~l~-------~l~~~~~~l~~~~~ 398 (849)
...+.|...+.++..|+...+..+.+.+.|.+ ......++..+...... .+ +++. .+...+..|.....
T Consensus 11 ~~~~~y~~~~~~ll~Wi~~~~~~l~~~~~~~~--l~~~~~~l~~f~~~~~~-~~p~~~~ek~~le~~~~~~~~~l~~~~~ 87 (476)
T 1hci_A 11 RLMEEYERLASELLEWIRRTIPWLENRTPEKT--MQAMQKKLEDFRDYRRK-HKPPKVQEKCQLEINFNTLQTKLRISNR 87 (476)
T ss_dssp HHHHHHHHHHHHHHTHHHHHHHHTTCCCCCSS--STTTTHHHHHHHHHHHH-THHHHHHHHHHTTTHHHHTTTTTTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCc--HHHHHHHHHHHHHHhhc-cCCHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 34677999999999999999999988664432 33334455556555554 33 4444 22222222211100
Q ss_pred hhhHHHhHHHHHHHHHHhhhcccchHHHHHhHhhhccHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy4475 399 NLDAQFVDEQKLLDEINLWKNSQSDEDLAHLADSIKPLDEVVERIENNAVPKLKSLLLLREQFTTLIMQIVGFITETTAR 478 (849)
Q Consensus 399 ~~d~~~~~~q~llee~~~~~~~~~~~~~~~l~~~l~~~~~i~e~~~~~~~~~l~~~l~~~~qf~~~~~el~~wl~e~~~~ 478 (849)
...+..+.. . ..+ .+..+.+|........+.+. ....+++.+.....+|...+.++..||.+++..
T Consensus 88 ~~~~~~~~~-~-~~~--------i~~~w~~L~~l~~~r~~~l~----~~~~R~~~Le~~~~~f~~~~~~~~~Wl~e~e~~ 153 (476)
T 1hci_A 88 PAFMPSEGK-M-VSD--------IAGAWQRLEQAEKGYEEWLL----NEIRRLERLEHLAEKFRQKASTHETWAYGKEQI 153 (476)
T ss_dssp CCCCCCGGG-C-SSS--------HHHHHHHHHHHHTTHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred CCCCCCCCC-C-HHH--------HHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 000000000 0 000 01122223222222111111 112233333444789999999999999999999
Q ss_pred hccc---cCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 479 VGEV---DGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNTLVGDLDTRRE 549 (849)
Q Consensus 479 ~~~~---~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~l~~L~~~W~~L~~~~~~R~~ 549 (849)
+... +.....|+..+++|+.+ ....++.|...|+.|+... +++...|..++..|+.+|+.|...+..|..
T Consensus 154 l~~~~~~g~dl~~v~~ll~kh~~~~~~l~~~~~~v~~l~~~~~~L~~~~-~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~ 232 (476)
T 1hci_A 154 LLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD-YHDAVNVNDRCQKICDQWDRLGTLTQKRRE 232 (476)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCc-CcchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8543 33455678888888766 2345889999999999764 478889999999999999999999999999
Q ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhH
Q psy4475 550 KLTELAEQWE-------QLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAP 622 (849)
Q Consensus 550 ~Le~a~~~~~-------~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~ 622 (849)
.|+.+...++ +|...+.++..||.+++..+.+.+. +++...++.+...++.+..++.........+..+...
T Consensus 233 ~L~~~~~~~~~~e~l~~~f~~~a~~~~~Wl~~~~~~l~~~~~-~~dl~~v~~ll~~h~~~~~~l~~~~~~~~~~~~l~~~ 311 (476)
T 1hci_A 233 ALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFI-VHSIEEIQSLITAHEQFKATLPEADGERQSIMAIQNE 311 (476)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc-cCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999987665 7999999999999999999998775 7788888888888888888888777666666444443
Q ss_pred HHHHHhhcch----hHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHh
Q psy4475 623 IVKFLKKDGL----DLQKRITALELLSEEL---NSKLEEKGKEVQKAKAM-------RAAYLTDVEKIGTWLQDAEAKIQ 688 (849)
Q Consensus 623 l~~~~~~~~~----d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~-------~~~f~~d~~~l~~WL~e~E~~l~ 688 (849)
...++...+. +...+...+..+..+| ...+..|...|+.++.. ++.|+.+++++..||.+++..+.
T Consensus 312 ~~~l~~~~~~~~~~~~~~i~~~~~~L~~~w~~L~~~~~~R~~~L~~~l~~~~~~~~L~~~F~~~a~~~~~Wl~e~e~~l~ 391 (476)
T 1hci_A 312 VEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELARQHANERLRRQFAAQANAIGPWIQNKMEEIA 391 (476)
T ss_dssp HHHHHHTTTCCSCSCCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcCCCcCCCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3344433232 3455667788888899 78899999999999984 46999999999999999999997
Q ss_pred cC--CCCc--hHHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcC--CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 689 DR--TLPP--QTLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHT--ESNEERALIQSTILSFTEQMQQIEMKLNERKKE 762 (849)
Q Consensus 689 ~~--~~~~--~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~--~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~ 762 (849)
+. +..+ ..+..+++.|+.+|..+.+.+..+...|+.+.... .+|.. ...+..|+.||..|...+..|...
T Consensus 392 ~~~~~~~~~le~~l~~~~~~~~el~~~~~~~~~l~~~~~~l~~~~~~~~~~~----~~~~~~l~~~W~~L~~~~~~~~~~ 467 (476)
T 1hci_A 392 RSSIQITGALEDQMNQLKQYEHNIINYKNNIDKLEGDHQLIQEALVFDNKHT----NYTMEHIRVGWELLLTTIARTINE 467 (476)
T ss_dssp SCSCTTTTSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCTTC----SCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHhcccCCCcc----hhhHHHHHHHHHHHHHHHHHHHHH
Confidence 43 2211 12336788999999999999999999999876533 13321 267889999999999999999999
Q ss_pred HHHHH
Q psy4475 763 VTGCD 767 (849)
Q Consensus 763 Le~~l 767 (849)
|+..+
T Consensus 468 lE~~i 472 (476)
T 1hci_A 468 VETQI 472 (476)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 99764
No 6
>3edv_A Spectrin beta chain, brain 1; spectrin repeat, coiled coil, actin capping, actin-binding, alternative splicing, calmodulin-binding, cytoplasm; 1.95A {Homo sapiens}
Probab=99.90 E-value=8.1e-21 Score=206.52 Aligned_cols=274 Identities=12% Similarity=0.133 Sum_probs=234.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHh-hhhhHHHHHhhhhHHHHHHhhcchhHH
Q psy4475 557 QWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVES-EKPKVSQISTLAAPIVKFLKKDGLDLQ 635 (849)
Q Consensus 557 ~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~-l~~~~~~i~~~~~~l~~~~~~~~~d~~ 635 (849)
...+|...+.++..||.+++..+.+.++ |.+...+..+...++.+..++.. ..+.+..++..+..|.. ..+++..
T Consensus 7 ~l~~f~~~~~~l~~Wl~~~e~~l~~~~~-g~dl~~v~~l~~~~~~f~~el~~~~~~~v~~v~~~~~~L~~---~~~~~~~ 82 (323)
T 3edv_A 7 RLFQLNREVDDLEQWIAEREVVAGSHEL-GQDYEHVTMLQERFREFARDTGNIGQERVDTVNHLADELIN---SGHSDAA 82 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCcC-CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH---cCCCChH
Confidence 4567999999999999999999987655 87889999999999999999988 46788899988887644 3477889
Q ss_pred HHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCchH---HHHHHHHHHHHH
Q psy4475 636 KRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDR-TLPPQT---LIQFIQQLEGEL 708 (849)
Q Consensus 636 ~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~-~~~~~~---l~~~lq~Lq~Ei 708 (849)
.|...++.++.+| ...+..|...|+.++. ++.|+.+++++..||.+++..+... +.++.. +..+++.|+.+|
T Consensus 83 ~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~f~~~~~e~~~Wl~~k~~~l~~~~~~d~~~v~~l~~~h~~~~~~l 161 (323)
T 3edv_A 83 TIAEWKDGLNEAWADLLELIDTRTQILAASYE-LHKFYHDAKEIFGRIQDKHKKLPEELGRDQNTVETLQRMHTTFEHDI 161 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHTCCCCCCSSHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHHHHHHH
Confidence 9999999999999 7889999999999995 4689999999999999999887421 112222 236778999999
Q ss_pred HhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 709 IDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKR 788 (849)
Q Consensus 709 ~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e 788 (849)
.++.+.|..|...|..|...+ +++++..|+.++..|+.+|..|+..+..|+..|++++. ++.|+..+.++..||.+++
T Consensus 162 ~~~~~~v~~l~~~a~~L~~~~-~~~~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~~~~-~~~F~~~~~~l~~Wl~~~~ 239 (323)
T 3edv_A 162 QALGTQVRQLQEDAARLQAAY-AGDKADDIQKRENEVLEAWKSLLDACESRRVRLVDTGD-KFRFFSMVRDLMLWMEDVI 239 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999987 45567899999999999999999999999999999996 8899999999999999999
Q ss_pred hhhcCCCCCCch---HHHHHHHHHHHHHHHHhhHhhHhhhhhhHHHHh-hccc
Q psy4475 789 TFLSEPYDSNNL---SDLRVKLNSYTELTSFVNKHTRKVKDLSKNTQE-AYVS 837 (849)
Q Consensus 789 ~~~~~~~~~~~l---~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~ 837 (849)
..+..+..+.++ +.+..+|+.|...+....+....+.++|..|.. +++.
T Consensus 240 ~~l~~~~~~~d~~~~e~ll~~h~~l~~ei~~~~~~~~~l~~~g~~Ll~~~~~~ 292 (323)
T 3edv_A 240 RQIEAQEKPRDVSSVELLMNNHQGIKAEIDARNDSFTTCIELGKSLLARKHYA 292 (323)
T ss_dssp HHHHTCCCCCSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHhCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 766655555554 455688999999999999999999999999999 7643
No 7
>1u4q_A Spectrin alpha chain, brain; alpha spectrin, three repeats of spectrin, alpha-helical linker region, 3-helix coiled-coil, structural protein; 2.50A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 a.7.1.1
Probab=99.89 E-value=1.7e-20 Score=203.81 Aligned_cols=273 Identities=13% Similarity=0.220 Sum_probs=235.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHH
Q psy4475 557 QWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQK 636 (849)
Q Consensus 557 ~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~ 636 (849)
+...|+..+.++..||.+++..+.+.++ |.+...++.+.+.++.++.++......+..+...+..|. ...+.+...
T Consensus 4 ~~~~F~~~~~~l~~Wl~~~e~~l~~~~~-g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~a~~l~---~~~~~~~~~ 79 (322)
T 1u4q_A 4 KQQNFNTGIKDFDFWLSEVEALLASEDY-GKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM---TSSAFDTSQ 79 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCC-CSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHT---TCCSSCTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCcc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHh---hcCCCChHH
Confidence 3467999999999999999999998654 778888888888899999999998888888888777543 334677888
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--chH---HHHHHHHHHHHH
Q psy4475 637 RITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQT---LIQFIQQLEGEL 708 (849)
Q Consensus 637 i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~~---l~~~lq~Lq~Ei 708 (849)
|...+..++.+| ...+..|+..|+.++.. ++|+.+++++..||.+++..+.+.+.. ... +..+++.|+.+|
T Consensus 80 i~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l-~~f~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~~h~~l~~el 158 (322)
T 1u4q_A 80 VKDKRETINGRFQRIKSMAAARRAKLNESHRL-HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAEL 158 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999 78899999999999984 689999999999999999988764432 222 236778999999
Q ss_pred HhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 709 IDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKR 788 (849)
Q Consensus 709 ~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e 788 (849)
.+|.+.|..+...|..|+... ++ ++..|+.++..|+.+|..|...+..|...|++++. +++|...+.++..||.+++
T Consensus 159 ~~~~~~i~~l~~~g~~L~~~~-~~-~~~~i~~~l~~L~~~w~~L~~~~~~R~~~L~~~~~-~~qf~~~~~~~~~Wl~~~e 235 (322)
T 1u4q_A 159 AAHEPAIQGVLDTGKKLSDDN-TI-GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKM 235 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CS-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhcC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999876 44 57799999999999999999999999999999997 8999999999999999999
Q ss_pred hhhcCCCCCCch---HHHHHHHHHHHHHHHHhhHhhHhhhhhhHHHHh-hccc
Q psy4475 789 TFLSEPYDSNNL---SDLRVKLNSYTELTSFVNKHTRKVKDLSKNTQE-AYVS 837 (849)
Q Consensus 789 ~~~~~~~~~~~l---~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~ 837 (849)
..+..+..+.++ ..+..+|..|...+......+..+...|..|.. +++.
T Consensus 236 ~~l~~~~~g~~~~~~~~ll~~h~~~~~el~~~~~~v~~l~~~~~~L~~~~~~~ 288 (322)
T 1u4q_A 236 TLVASEDYGDTLAAIQGLLKKHEAFETDFTVHKDRVNDVCANGEDLIKKNNHH 288 (322)
T ss_dssp HHHTCCCCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTT
T ss_pred HHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 887776666665 445688999999999999999999999999999 6653
No 8
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.86 E-value=2.4e-19 Score=220.69 Aligned_cols=373 Identities=15% Similarity=0.207 Sum_probs=289.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccc--CCcccHHHHHHHHHHHhHH----------HHHHH-HHHHHHhcccCCccCh
Q psy4475 457 LREQFTTLIMQIVGFITETTARVGEVD--GNSATVQEKIDKYDKENQS----------EIDML-NDVWKEIKPKADQESD 523 (849)
Q Consensus 457 ~~~qf~~~~~el~~wl~e~~~~~~~~~--~~~~~ve~~~~k~~~~~q~----------el~~v-~~~g~~L~~~~~~~~~ 523 (849)
+..+|...+.++..||.++...+.+.. ...+.++..+++|..+... .++.+ ...+..+.....++-.
T Consensus 251 l~~~y~~~~~el~~Wi~~~~~~l~~~~~~~~l~~v~~~l~~~~~~~~~~k~~~~~e~~~le~~~~~l~~~l~~~~~~~~~ 330 (863)
T 1sjj_A 251 LMEDYEKLASDLLEWIRRTIPWLENRAPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFM 330 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGSSCCCCCSSHHHHHHHHHHHHHHHHTTSHHHHHHHHHHHHTTTHHHHHTTTTSSCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCcCCCHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHCCCCCCC
Confidence 457899999999999999999886543 3334567777777655221 12211 2222333221211112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHH
Q psy4475 524 QLIEDQIERINDQWNTLVGDLD----------TRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLT 593 (849)
Q Consensus 524 ~~I~~~l~~L~~~W~~L~~~~~----------~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~ 593 (849)
+.+...+..|+.+|+.|..... .|..+|+.. ..+|...+.++..||.+++..+.+.++..++...++
T Consensus 331 ~~~~~~~~~i~~~w~~L~~~~~~r~~~l~~~~~R~~~Le~l---~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~ 407 (863)
T 1sjj_A 331 PSEGKMVSDINNAWGGLEQAEKGYEEWLLNEIRRLERLDHL---AEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIK 407 (863)
T ss_dssp CSTTSCGGGHHHHHHHHHHHHTTTHHHHHHHHEEHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHH
Confidence 2234567888889999888765 455566653 467999999999999999999999766434788898
Q ss_pred HHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH---
Q psy4475 594 QNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRA--- 667 (849)
Q Consensus 594 ~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~--- 667 (849)
.+.+.++.++.++......+..+...+..|. ...+.+...|..+++.++.+| ...+..|+.+|+.++..++
T Consensus 408 ~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~---~~~~~~~~~I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~ 484 (863)
T 1sjj_A 408 ALLKKHEAFESDLAAHQDRVEQIAAIAQELN---ELDYYDSPSVNARCQKICDQWDNLGALTQKRREALERTEKLLETID 484 (863)
T ss_dssp HHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH---HTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888899999998888888888888777654 334678899999999999999 7889999999999998875
Q ss_pred ----HHHHHHHHHHHHHHHHHHHHhcCCC--Cch---HHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhc---CC--ChH
Q psy4475 668 ----AYLTDVEKIGTWLQDAEAKIQDRTL--PPQ---TLIQFIQQLEGELIDMKDKLAQMTRTGNEISQH---TE--SNE 733 (849)
Q Consensus 668 ----~f~~d~~~l~~WL~e~E~~l~~~~~--~~~---~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~---~~--~~~ 733 (849)
+|+.+++++..||.+++..+.+... +.. .+..+|+.|+.+|.++.+.+..+...+..+... .. +..
T Consensus 485 ~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~g~dl~~ve~ll~kh~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 564 (863)
T 1sjj_A 485 QLYLEYAKRAAPFNNWMEGAMEDLQDTFIVHTIEEIQGLTTAHEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAG 564 (863)
T ss_dssp HHHHHHHHHTTTTHHHHHHHHHHHHCCCCCSSSGGGHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcchHhhccHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccC
Confidence 8999999999999999999976432 112 234778899999999999999999999987652 10 111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhhcCCC--CCCchHHHH
Q psy4475 734 ERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD-------DAWKHFLSLHAEVMKWVSEKRTFLSEPY--DSNNLSDLR 804 (849)
Q Consensus 734 e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l-------~~~~~f~~~~~el~~Wl~~~e~~~~~~~--~~~~l~~~~ 804 (849)
+...+..++..|..||..|+..+..|+..|++++ ..++.|...+.++..||.+++..+.... .+.+++++.
T Consensus 565 ~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~l~~~F~~~a~~~~~Wi~e~e~~l~~~~~~~~~~le~~l 644 (863)
T 1sjj_A 565 TNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNERLRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQL 644 (863)
T ss_dssp CCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTCTTTSSHHHH
T ss_pred CCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCHHHHH
Confidence 2234567899999999999999999999999998 5688999999999999999997665432 257889999
Q ss_pred HHHHHHHHHHHHhhHhhHhhhhhhHHHHh-hc
Q psy4475 805 VKLNSYTELTSFVNKHTRKVKDLSKNTQE-AY 835 (849)
Q Consensus 805 ~~l~~~~~~~~~~~~~~~~l~~~~~~L~~-~~ 835 (849)
++|..+...+.........+..++..|.. ++
T Consensus 645 ~~~~~~~~el~~~~~~i~~l~~l~~~L~~~~~ 676 (863)
T 1sjj_A 645 NHLRQYEKSIVNYKPKIDQLEGDHQQIQEALI 676 (863)
T ss_dssp HHHHHHHHHHHTTGGGHHHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcC
Confidence 99999999999999999999999999998 54
No 9
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=99.86 E-value=7.1e-19 Score=191.41 Aligned_cols=268 Identities=11% Similarity=0.104 Sum_probs=216.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHH
Q psy4475 558 WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637 (849)
Q Consensus 558 ~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i 637 (849)
.++|...+.++..||.+++..+++.++ |.+...++.+.+.++.++.++......+..+...+..|.. ..+++...|
T Consensus 6 ~qqf~~~~~el~~Wl~e~~~~l~~~~~-g~d~~~~~~ll~kh~~~~~el~~~~~~v~~l~~~~~~L~~---~~~~~~~~i 81 (326)
T 3kbt_A 6 AQQYYLDADEAEAWIGEQELYVISDEI-PKDEEGAIVMLKRHLRQQRAVEDYGRNIKQLASRAQGLLS---AGHPEGEQI 81 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTSCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCcc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc---CCCCChHHH
Confidence 568999999999999999999988554 7888888888888888888888888888888877776543 224678889
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--chH---HHHHHHHHHHHHH
Q psy4475 638 ITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQT---LIQFIQQLEGELI 709 (849)
Q Consensus 638 ~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~~---l~~~lq~Lq~Ei~ 709 (849)
...+..++.+| ...+..|+.+|+.++.. +.|+.+++++..||.+++..+.+.++. ... +..+++.|+.+|.
T Consensus 82 ~~~l~~l~~~w~~L~~~~~~R~~~Le~~l~l-~~f~~~~~~l~~Wl~~~e~~l~~~~~g~d~~~v~~l~~~~~~f~~el~ 160 (326)
T 3kbt_A 82 IRLQGQVDKHYAGLKDVAEERKRKLENMYHL-FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETG 160 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHccccCCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 78899999999999965 699999999999999999988764422 122 2356789999999
Q ss_pred h-hHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 710 D-MKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKR 788 (849)
Q Consensus 710 ~-~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e 788 (849)
+ +.+.|..++..|..|+... +| ++..|+.+++.|+.+|..|...+..|...|+.++. ++.|+..+.++..||.+++
T Consensus 161 ~~~~~~v~~l~~~~~~L~~~~-~~-~~~~i~~~~~~l~~~W~~l~~~~~~r~~~L~~a~~-~~~f~~~~~e~~~Wl~ek~ 237 (326)
T 3kbt_A 161 AIGQERVDNVNAFIERLIDAG-HS-EAATIAEWKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDEKH 237 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHHHHcC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 8 7999999999999999987 54 46789999999999999999999999999999995 8899999999999999999
Q ss_pred hhhcCCC--CCCchHHHHHHHHHHHHHHHHhhHhhHhhhhhhHHHHh
Q psy4475 789 TFLSEPY--DSNNLSDLRVKLNSYTELTSFVNKHTRKVKDLSKNTQE 833 (849)
Q Consensus 789 ~~~~~~~--~~~~l~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~ 833 (849)
..++.++ .+.++.....+|..|...+....+.+..|...|..|..
T Consensus 238 ~~L~~~~~~d~~~~~~ll~~~~~~e~~l~~~~~~v~~l~~~a~~L~~ 284 (326)
T 3kbt_A 238 RELPEDVGLDASTAESFHRVHTAFERDVHLLGVQVQQFQDVATRLQT 284 (326)
T ss_dssp HC---------------------CHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7765432 33455667788999999999999999999999999987
No 10
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.79 E-value=5.7e-17 Score=179.86 Aligned_cols=248 Identities=10% Similarity=0.059 Sum_probs=206.4
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHH
Q psy4475 563 KLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALE 642 (849)
Q Consensus 563 ~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~ 642 (849)
..++++..||.+++..+.+.++ |.+...++.+.+.+..++.+|......+..+...+.. + ..+.
T Consensus 9 r~v~dl~~Wl~E~~~~L~S~d~-GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~--------~-------~~~~ 72 (450)
T 3r6n_A 9 HVTSECLGWMRQQRAEMDMVAW-GVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLRE--------K-------SAIY 72 (450)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC--------H-------HHHH
T ss_pred ccHHHHHHHHHHHHHhcCcccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC--------c-------HHHH
Confidence 3478899999999999999877 8888999999999999999988886665555443220 1 1234
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCchHHHHHHHHHHHHHHhhHHH
Q psy4475 643 LLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRT-----LPPQTLIQFIQQLEGELIDMKDK 714 (849)
Q Consensus 643 ~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~-----~~~~~l~~~lq~Lq~Ei~~~~~~ 714 (849)
.+..+| ...+..|+..|+. +++|+.++++...||.+++..+.+.+ .....++.+++.|+.||.+|++.
T Consensus 73 ~L~~~y~~L~~~a~~Rr~~Le~----L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~dv~~l~~khq~l~~EL~~~e~~ 148 (450)
T 3r6n_A 73 QLEEEYENLLKASFERMDHLRQ----LQNIIQATSREIMWINDCEEEELLYDWSDKNTNIAQKQEAFSIRMSQLEVKEKE 148 (450)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhccccCcChhhHHHHHHHHHHHHHHHHHchHH
Confidence 444555 7888999999982 46999999999999999999886532 12233558899999999999999
Q ss_pred HHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCC
Q psy4475 715 LAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKRTFLSEP 794 (849)
Q Consensus 715 ~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e~~~~~~ 794 (849)
+..+...|..|+... || .+..|+.+++.|+.+|..|...+..|..+|+++.. +++|+.+++++.+||.+++.++..+
T Consensus 149 i~~v~~~G~~Li~~~-Hp-as~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~QF~~Da~EaesWL~eke~~l~s~ 225 (450)
T 3r6n_A 149 LNKLKQESDQLVLNQ-HP-ASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAA-YFQFFEEAQSTEAYLKGLQDSIRKK 225 (450)
T ss_dssp HHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-CC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999987 66 46789999999999999999999999999999996 8999999999999999999776554
Q ss_pred ---CCCCch---HHHHHHHHHHHHHHHHhhHhhHhhhhhhHHHHh
Q psy4475 795 ---YDSNNL---SDLRVKLNSYTELTSFVNKHTRKVKDLSKNTQE 833 (849)
Q Consensus 795 ---~~~~~l---~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~L~~ 833 (849)
..+.++ ..+.++|.+++..+......+..|..-++.|..
T Consensus 226 y~~D~g~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~ 270 (450)
T 3r6n_A 226 YPCDKNMPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQ 270 (450)
T ss_dssp SCCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred ccCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 444444 567799999999999999999999999888775
No 11
>1sjj_A Actinin; 3-helix bundle, calponin homology domain, calmodulin-like domain, actin binding protein, contractIle protein; 20.00A {Gallus gallus} SCOP: i.15.1.1
Probab=99.79 E-value=6.9e-17 Score=198.78 Aligned_cols=306 Identities=14% Similarity=0.196 Sum_probs=242.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhccccCC---cccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHH
Q psy4475 455 LLLREQFTTLIMQIVGFITETTARVGEVDGN---SATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQL 525 (849)
Q Consensus 455 l~~~~qf~~~~~el~~wl~e~~~~~~~~~~~---~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~ 525 (849)
.....+|...+.++..||.+++..+.+...+ ..+++..+++|+.+ .+..+..+...|+.|+... ++....
T Consensus 369 e~l~~~F~~~~~~~~~Wl~~~e~~l~~~~~g~~dl~~v~~ll~kh~~f~~el~~~~~~v~~l~~~~~~L~~~~-~~~~~~ 447 (863)
T 1sjj_A 369 DHLAEKFRQKASIHESWTDGKEAMLQQKDYETATLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELD-YYDSPS 447 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTSSCHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTC-CTTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC-cccHHH
Confidence 3346999999999999999999999765443 34577788888766 3445889999999999754 578999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHH
Q psy4475 526 IEDQIERINDQWNTLVGDLDTRREKLTELAEQWE-------QLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSE 598 (849)
Q Consensus 526 I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~-------~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~ 598 (849)
|..++..|+.+|+.|...+..|..+|+.++...+ +|...+.++..||.+++..+.+.+. +++...++.+.+.
T Consensus 448 I~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~~q~~~~l~~~f~~~a~~~~~Wl~~~e~~l~~~~~-g~dl~~ve~ll~k 526 (863)
T 1sjj_A 448 VNARCQKICDQWDNLGALTQKRREALERTEKLLETIDQLYLEYAKRAAPFNNWMEGAMEDLQDTFI-VHTIEEIQGLTTA 526 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHCCCC-CSSSGGGHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHh-hccHHHHHHHHHH
Confidence 9999999999999999999999999999997765 7888889999999999999998765 7777888888888
Q ss_pred HHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcc----hhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH-------H
Q psy4475 599 LESLLGTVESEKPKVSQISTLAAPIVKFLKKDG----LDLQKRITALELLSEEL---NSKLEEKGKEVQKAK-------A 664 (849)
Q Consensus 599 l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~----~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~-------~ 664 (849)
++.++.++......+..+..++..+.......+ .+...+...+..+..+| ...+..|...|+.++ .
T Consensus 527 h~~~~~~l~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~rw~~L~~~~~~R~~~L~~~l~~~~~~~~ 606 (863)
T 1sjj_A 527 HEQFKATLPDADKERQAILGIHNEVSKIVQTYHVNMAGTNPYTTITPQEINGKWEHVRQLVPRRDQALMEEHARQQQNER 606 (863)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCSCCSSSSCCHHHHHHHHHHHHHHHHHHHHHHGGGHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhHH
Confidence 889999988887777777777776655433211 11122234577788888 788999999999998 5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCC-c---hHHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHH
Q psy4475 665 MRAAYLTDVEKIGTWLQDAEAKIQDRTLP-P---QTLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQS 740 (849)
Q Consensus 665 ~~~~f~~d~~~l~~WL~e~E~~l~~~~~~-~---~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~ 740 (849)
+++.|..+++++..||.+++..+.+.+.. + ..+..+++.|..+|.++.+.+..+...++.|.... ++ ....+..
T Consensus 607 l~~~F~~~a~~~~~Wi~e~e~~l~~~~~~~~~~le~~l~~~~~~~~el~~~~~~i~~l~~l~~~L~~~~-~~-~~~~~~~ 684 (863)
T 1sjj_A 607 LRKQFGAQANVIGPWIQTKMEEIGRISIEMHGTLEDQLNHLRQYEKSIVNYKPKIDQLEGDHQQIQEAL-IF-DNKHTNY 684 (863)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTSCTTCTTTSSHHHHHHHHHHHHHHHTTGGGHHHHHHHHHHHHTTT-CC-CCTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CC-CCCcccc
Confidence 67899999999999999999999764331 2 22336788999999999999999999999998765 21 1123446
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 741 TILSFTEQMQQIEMKLNERKKEVT 764 (849)
Q Consensus 741 ~l~~L~~rW~~L~~~~~~r~~~Le 764 (849)
.+..+...|..+...+..+....+
T Consensus 685 s~e~l~i~~~eF~~~~~~~~~~~e 708 (863)
T 1sjj_A 685 TMEHIRVGWEQLLTTIARTINEVE 708 (863)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhHH
Confidence 778888899998888777665544
No 12
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=99.78 E-value=8.4e-16 Score=170.51 Aligned_cols=333 Identities=10% Similarity=0.152 Sum_probs=254.2
Q ss_pred HHHHHHHHHHHHHHHhhhc--cccCCcccHHHHHHHHHHHhHHHHHHHHHHHHHhcccCCccChHHHHHHHHHHHHHHHH
Q psy4475 462 TTLIMQIVGFITETTARVG--EVDGNSATVQEKIDKYDKENQSEIDMLNDVWKEIKPKADQESDQLIEDQIERINDQWNT 539 (849)
Q Consensus 462 ~~~~~el~~wl~e~~~~~~--~~~~~~~~ve~~~~k~~~~~q~el~~v~~~g~~L~~~~~~~~~~~I~~~l~~L~~~W~~ 539 (849)
.+.++++..||.+++..+. +.+.+.++|+..+++|..+ ..+|......-..|...++. ..++..|..+|..
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~l-E~eI~a~~~~v~~l~~~a~~------~~~~~~L~~~y~~ 80 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGI-HNSIGDYRWQLDKIKADLRE------KSAIYQLEEEYEN 80 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHCCC------HHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHhhcC------cHHHHHHHHHHHH
Confidence 4567899999999999995 4455667899999999854 22233222222223322221 2367899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhh
Q psy4475 540 LVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTL 619 (849)
Q Consensus 540 L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~ 619 (849)
|...+..|+..|+. ..+|...+.+...||.+.+..+.+.+. +.+...+..+.+.++.++.++.+..+.+..+...
T Consensus 81 L~~~a~~Rr~~Le~----L~qFl~d~~ee~~Wi~EKe~~~~s~d~-gd~l~dv~~l~~khq~l~~EL~~~e~~i~~v~~~ 155 (450)
T 3r6n_A 81 LLKASFERMDHLRQ----LQNIIQATSREIMWINDCEEEELLYDW-SDKNTNIAQKQEAFSIRMSQLEVKEKELNKLKQE 155 (450)
T ss_dssp HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHSCCC-STTCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHhcccc-CcChhhHHHHHHHHHHHHHHHHHchHHHHHHHHH
Confidence 99999999999973 357888899999999999999988765 3222334444566777777777777777777777
Q ss_pred hhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-----C
Q psy4475 620 AAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDR-----T 691 (849)
Q Consensus 620 ~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~-----~ 691 (849)
+..| +...++....|...++.|...| ...+..|+.+|+.+.... +|+.|+++..+||.+.+..+.+. +
T Consensus 156 G~~L---i~~~Hpas~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~~~-QF~~Da~EaesWL~eke~~l~s~y~~D~g 231 (450)
T 3r6n_A 156 SDQL---VLNQHPASDKIEAYMDTLQTQWSWILQITKCIDVHLKENAAYF-QFFEEAQSTEAYLKGLQDSIRKKYPCDKN 231 (450)
T ss_dssp HHHH---HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHSCCCTT
T ss_pred HHHH---HHcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hHHHHHHHHHHHHHHHHHHhcccccCcCC
Confidence 7754 3344788899999999999999 788999999999999764 89999999999999999988643 2
Q ss_pred CCch---HHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcC---------------------------------------
Q psy4475 692 LPPQ---TLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHT--------------------------------------- 729 (849)
Q Consensus 692 ~~~~---~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~--------------------------------------- 729 (849)
.+.. .+..+|..++.+|.++...|..|...++.|+...
T Consensus 232 ~d~~~~e~LLkkh~~le~~l~~~~~~I~~L~~qA~~l~~l~~r~~~~~~~~~~~V~alcdy~~~e~~i~kge~~~L~~ns 311 (450)
T 3r6n_A 232 MPLQHLLEQIKELEKEREKILEYKRQVQNLVNKSKKIVQLKPRNPDYRSNKPIILRALCDYKQDQKIVHKGDECILKDNN 311 (450)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGSTTCCCSSCCEEEESSCEEETTEEECTTCEEEEEECS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCcccCCCceEEEeccccCCeeeEecCCEEEEecCC
Confidence 2222 2447888999999999999999999999865300
Q ss_pred -----------------------CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 730 -----------------------ESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSE 786 (849)
Q Consensus 730 -----------------------~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~ 786 (849)
.+|++.+ .-.....|...|..|...|..+.-.+.+.+. |+.|..++..+.+|...
T Consensus 312 ~~~~W~V~~~~G~~~~vPavcf~ipppd~e-ai~~a~~l~~~~~~~~~lw~~~~~~~~~~~~-~~~~~~d~~~i~~w~~~ 389 (450)
T 3r6n_A 312 ERSKWYVTGPGGVDMLVPSVGLIIPPPNPL-AVDLSCKIEQYYEAILALWNQLYINMKSLVS-WHYCMIDIEKIRAMTIA 389 (450)
T ss_dssp SSSEEEEECSSSCCEEEEGGGEECCSCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHTCCHH
T ss_pred CCCceEEecCCCCeeccceeEEecCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhhhHH
Confidence 0122333 3455678899999999999999999999996 99999999999999999
Q ss_pred HHhhhcCCCCCCchHHHHHHHHHHHH
Q psy4475 787 KRTFLSEPYDSNNLSDLRVKLNSYTE 812 (849)
Q Consensus 787 ~e~~~~~~~~~~~l~~~~~~l~~~~~ 812 (849)
+-..+..+.+...+..+...+++|..
T Consensus 390 ~~~~~~~~~~~~~~~~l~~~~~~f~~ 415 (450)
T 3r6n_A 390 KLKTMRQEDYMKTIADLELHYQEFIR 415 (450)
T ss_dssp HHTTSCTTTHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 87777776666666666666666654
No 13
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.76 E-value=1.6e-16 Score=161.99 Aligned_cols=203 Identities=12% Similarity=0.219 Sum_probs=172.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHH
Q psy4475 558 WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637 (849)
Q Consensus 558 ~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i 637 (849)
..+|...+.++..||.+++..+.+.++ |.+...++.+.+.++.++.+|......+..+...+..|. ...+.+...|
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~~~-g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~---~~~~~~~~~i 80 (216)
T 1u5p_A 5 QQNFNTGIKDFDFWLSEVEALLASEDY-GKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLM---TSSAFDTSQV 80 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TCSSSCTHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hcCCCChHHH
Confidence 467999999999999999999998755 778888888888889999999988888888888777543 3346778889
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--chH---HHHHHHHHHHHHH
Q psy4475 638 ITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQT---LIQFIQQLEGELI 709 (849)
Q Consensus 638 ~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~~---l~~~lq~Lq~Ei~ 709 (849)
...+..++.+| ...+..|+.+|+.++.. ++|+.+++++..||.+++..+.+.+.. ... +..+++.|+.+|.
T Consensus 81 ~~~~~~l~~~w~~L~~~~~~R~~~Le~~~~l-~qf~~~~~~~~~Wl~e~e~~~~~~~~g~dl~~v~~ll~kh~~~~~el~ 159 (216)
T 1u5p_A 81 KDKRETINGRFQRIKSMAAARRAKLNESHRL-HQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELA 159 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 78899999999999985 589999999999999999987654321 222 3467889999999
Q ss_pred hhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 710 DMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD 767 (849)
Q Consensus 710 ~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l 767 (849)
+|.+.|..|...|..|+..+ ++ ++..|+.++..|+.+|..|+..+..|...|+.++
T Consensus 160 ~~~~~i~~l~~~g~~L~~~~-~~-~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 160 AHEPAIQGVLDTGKKLSDDN-TI-GKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHTC-SS-CSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HhHHHHHHHHHHHHHHHhcC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999876 44 5668999999999999999999999999998876
No 14
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.74 E-value=2.8e-16 Score=160.24 Aligned_cols=206 Identities=11% Similarity=0.115 Sum_probs=163.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHh-hhhhHHHHHhhhhHHHHHHhhcchhHHHH
Q psy4475 559 EQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVES-EKPKVSQISTLAAPIVKFLKKDGLDLQKR 637 (849)
Q Consensus 559 ~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~-l~~~~~~i~~~~~~l~~~~~~~~~d~~~i 637 (849)
.+|...+.++..||.+++..+.+.++ +.+...+..+.+.++.+..++.. ..+.+..++..+..|.. ..+++...|
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~~~~-g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~---~~~~~~~~i 79 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASSPEM-GQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLID---AGHSEAATI 79 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHccccc-CCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHH---cCCCCHHHH
Confidence 57889999999999999999988654 77889999888999999999988 57888899998887654 346788899
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCCchH---HHHHHHHHHHHHHh
Q psy4475 638 ITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDR-TLPPQT---LIQFIQQLEGELID 710 (849)
Q Consensus 638 ~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~-~~~~~~---l~~~lq~Lq~Ei~~ 710 (849)
...++.++.+| ...+..|...|+.++. .++|+.+++++..||.+++..+... +.++.. +..+|+.|+.+|.+
T Consensus 80 ~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~-~~~F~~~~~e~~~Wl~ek~~~l~~~~g~dl~~v~~l~~~h~~~e~dL~~ 158 (218)
T 3edu_A 80 AEWKDGLNEMWADLLELIDTRMQLLAASYD-LHRYFYTGAEILGLIDEKHRELPEDVGLDASTAESFHRVHTAFERELHL 158 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCCC-------------CCSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhCCCccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999 7889999999999985 5699999999999999999988411 111211 22467899999999
Q ss_pred hHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 711 MKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAW 770 (849)
Q Consensus 711 ~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~ 770 (849)
+.+.|..|...|..|...+ +++.+..|..+++.|+.+|..|...+..|+..|++++..|
T Consensus 159 ~~~~v~~l~~~a~~L~~~~-~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~~ 217 (218)
T 3edu_A 159 LGVQVQQFQDVATRLQTAY-AGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADKF 217 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTC-CHHHHHHHHHHHHHHHHHHHHHHHHTC-------------
T ss_pred HHHHHHHHHHHHHHHHHHC-CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999886 4456789999999999999999999999999999998743
No 15
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.73 E-value=2.3e-15 Score=152.99 Aligned_cols=202 Identities=11% Similarity=0.228 Sum_probs=173.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHH
Q psy4475 559 EQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRI 638 (849)
Q Consensus 559 ~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~ 638 (849)
.+|...+.++..||.+++..+++.++ |.+...++.+.+.++.++.++....+.+..+...+..|.. ..+++...|.
T Consensus 3 ~qf~~~~~~~~~Wl~e~e~~l~~~~~-g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~---~~~~~~~~i~ 78 (213)
T 1cun_A 3 HQFFRDMDDEESWIKEKKLLVSSEDY-GRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSD---DNTIGKEEIQ 78 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---TTCTTHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHhcCccc-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh---cCCCcHHHHH
Confidence 57999999999999999999887654 7788888888888888888888888888888777776543 3367788899
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--chH---HHHHHHHHHHHHHh
Q psy4475 639 TALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQT---LIQFIQQLEGELID 710 (849)
Q Consensus 639 ~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~~---l~~~lq~Lq~Ei~~ 710 (849)
..+..++.+| ...+..|..+|+.++.. ++|+.+++++..||.+++..+.+.+.. ... +..+++.|+.+|..
T Consensus 79 ~~~~~l~~~w~~L~~~~~~R~~~Le~~~~~-~~f~~~~~e~~~Wl~~~e~~l~~~~~g~~~~~v~~ll~~h~~~~~el~~ 157 (213)
T 1cun_A 79 QRLAQFVDHWKELKQLAAARGQRLEESLEY-QQFVANVEEEEAWINEKMTLVASEDYGDTLAAIQGLLKKHEAFETDFTV 157 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 78899999999999975 699999999999999999988654322 122 33677899999999
Q ss_pred hHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 711 MKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD 767 (849)
Q Consensus 711 ~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l 767 (849)
+.+.|..|...|..|+..+ ++ ++..|..++..|+.+|..|+..+..|+..|+++.
T Consensus 158 ~~~~i~~l~~~~~~L~~~~-~~-~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 158 HKDRVNDVCANGEDLIKKN-NH-HVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHC-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcC-CC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9999999999999999986 54 5778999999999999999999999999999875
No 16
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.71 E-value=2.2e-15 Score=153.21 Aligned_cols=203 Identities=11% Similarity=0.103 Sum_probs=170.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHH
Q psy4475 559 EQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRI 638 (849)
Q Consensus 559 ~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~ 638 (849)
++|...+.++..||.+++..+++.++ +++...++.+.+.+..+..+|....+.+..+...+..|.... ..++...|.
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~~~-~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~--~~~~~~~i~ 79 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASEDM-PESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQ--TDPEYLLLG 79 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC--CSHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCC-CCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcC--CCccHHHHH
Confidence 36899999999999999999998775 668888888888888888888887777777777776543221 134678899
Q ss_pred HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--chH---HHHHHHHHHHHHHh
Q psy4475 639 TALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQT---LIQFIQQLEGELID 710 (849)
Q Consensus 639 ~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~~---l~~~lq~Lq~Ei~~ 710 (849)
..+..|+.+| ...+..|+..|+.++. ++.|+.+++++..||.++|..+.+.+.. ... +..+|+.|+.+|.+
T Consensus 80 ~~l~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~~~g~~~~~v~~llkkh~~f~~~l~~ 158 (214)
T 1s35_A 80 QRLEGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHLEPPDSLEAAEAGIRKFEDFLGSMEN 158 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 7889999999999997 5799999999999999999999765432 122 34678899999999
Q ss_pred hHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 711 MKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD 767 (849)
Q Consensus 711 ~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l 767 (849)
+.+.|..|...|..|+..+ +| ++..|..++..|+.||..|...+.+|...|+.++
T Consensus 159 ~~~~i~~l~~~a~~L~~~~-h~-~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 159 NRDKVLSPVDSGNKLVAEG-NL-YSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred hHHHHHHHHHHHHHHHHcC-CC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999887 55 4678999999999999999999999999998765
No 17
>1cun_A Protein (alpha spectrin); two repeats of spectrin, alpha helical linker region, 2 tandem 3-helix coiled- coils, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1 PDB: 1aj3_A
Probab=99.68 E-value=1.7e-14 Score=146.50 Aligned_cols=200 Identities=16% Similarity=0.194 Sum_probs=170.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc--cCCcccHHHHHHHHHHHh------HHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEV--DGNSATVQEKIDKYDKEN------QSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~--~~~~~~ve~~~~k~~~~~------q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
..+|.+++.++..||.++++.+... +...++|+..+++|..+. ...++.|...|+.|+..+ +++...|..+
T Consensus 2 l~qf~~~~~~~~~Wl~e~e~~l~~~~~g~dl~~v~~ll~kh~~~~~ei~~~~~~v~~v~~~g~~L~~~~-~~~~~~i~~~ 80 (213)
T 1cun_A 2 VHQFFRDMDDEESWIKEKKLLVSSEDYGRDLTGVQNLRKKHKRLEAELAAHEPAIQSVLDTGKKLSDDN-TIGKEEIQQR 80 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHHH
T ss_pred hHHHHHHHHHHHhHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC-CCcHHHHHHH
Confidence 4799999999999999999988654 334456778888887652 334889999999999864 4889999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|..|...+..|...|+.++. ..+|...+.++..||.+++..+.+.++ |++...++.+.+.++.++.++...
T Consensus 81 ~~~l~~~w~~L~~~~~~R~~~Le~~~~-~~~f~~~~~e~~~Wl~~~e~~l~~~~~-g~~~~~v~~ll~~h~~~~~el~~~ 158 (213)
T 1cun_A 81 LAQFVDHWKELKQLAAARGQRLEESLE-YQQFVANVEEEEAWINEKMTLVASEDY-GDTLAAIQGLLKKHEAFETDFTVH 158 (213)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCC-CSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHhhCCCC-CCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 578999999999999999999987655 778888888888898998888888
Q ss_pred hhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy4475 610 KPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAK 663 (849)
Q Consensus 610 ~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~ 663 (849)
...+..+...+..|. ...+++...|...+..+..+| ...+..|+..|+.+.
T Consensus 159 ~~~i~~l~~~~~~L~---~~~~~~~~~I~~~~~~l~~~w~~l~~~~~~R~~~L~~a~ 212 (213)
T 1cun_A 159 KDRVNDVCANGEDLI---KKNNHHVENITAKMKGLKGKVSDLEKAAAQRKAKLDENS 212 (213)
T ss_dssp HHHHHHHHHHHHHHH---HHCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH---HcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 878888887777654 344678889999999999999 788999999999875
No 18
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.66 E-value=7e-15 Score=153.14 Aligned_cols=216 Identities=14% Similarity=0.188 Sum_probs=178.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHH
Q psy4475 546 TRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVK 625 (849)
Q Consensus 546 ~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~ 625 (849)
.|..+|+.+ +.+|...+.++..||.+++..+.+.+++|++...++.+.+.++.++.++....+.+..+...+..|..
T Consensus 7 ~R~~kLe~l---~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~ 83 (250)
T 1quu_A 7 RRLERLEHL---AEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNE 83 (250)
T ss_dssp HHHHHHHHH---HHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 577778777 46899999999999999999999988878899999999999999999999988888888888886543
Q ss_pred HHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHhcCCC--C
Q psy4475 626 FLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRA-------AYLTDVEKIGTWLQDAEAKIQDRTL--P 693 (849)
Q Consensus 626 ~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~-------~f~~d~~~l~~WL~e~E~~l~~~~~--~ 693 (849)
..+++...|..+++.++.+| ...+..|+..|+.++...+ +|+.+++++..||.+++..+.+... +
T Consensus 84 ---~~~~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~~~d 160 (250)
T 1quu_A 84 ---LDYHDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFIVHS 160 (250)
T ss_dssp ---TTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCCCS
T ss_pred ---ccCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccccCC
Confidence 33577788999999999999 7889999999999998875 9999999999999999998876432 1
Q ss_pred ch---HHHHHHHHHHHHHHhhH---HHHHHHHHHHhHhhhcCCChH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 694 PQ---TLIQFIQQLEGELIDMK---DKLAQMTRTGNEISQHTESNE---ERALIQSTILSFTEQMQQIEMKLNERKKEVT 764 (849)
Q Consensus 694 ~~---~l~~~lq~Lq~Ei~~~~---~~~~~l~~~g~~L~~~~~~~~---e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le 764 (849)
+. .+..+++.|..++..+. +.|..+...+..|+..+ ++. +...|..++..|+.+|..|+..+..|...|+
T Consensus 161 ~e~v~~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~-~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~ 239 (250)
T 1quu_A 161 IEEIQSLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSY-NIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQ 239 (250)
T ss_dssp TTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHS-CTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-ccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 22 23467789996666655 55555566677887766 331 3346889999999999999999999999999
Q ss_pred HHHH
Q psy4475 765 GCDD 768 (849)
Q Consensus 765 ~~l~ 768 (849)
.++.
T Consensus 240 ~~l~ 243 (250)
T 1quu_A 240 EELA 243 (250)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 9986
No 19
>3edu_A Beta-I spectrin, spectrin beta chain, erythrocyte; ankyrin, ankyrin-binding domain, actin capping, AC binding, cytoskeleton, disease mutation; 2.10A {Homo sapiens} PDB: 3f57_A
Probab=99.66 E-value=2.5e-15 Score=153.14 Aligned_cols=200 Identities=11% Similarity=0.070 Sum_probs=146.6
Q ss_pred HHHHHHHHHHHHHHHHHHhhhcccc--CCcccHHHHHHHHHHHh-------HHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 459 EQFTTLIMQIVGFITETTARVGEVD--GNSATVQEKIDKYDKEN-------QSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 459 ~qf~~~~~el~~wl~e~~~~~~~~~--~~~~~ve~~~~k~~~~~-------q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
.+|.+.++++..||.+++..+...+ .....|+..+++|+.|. +..|+.|+..|..|+..+ +++.+.|+.+
T Consensus 4 ~~f~~~~~~l~~Wl~~ke~~l~~~~~g~dl~~v~~l~~k~~~f~~el~~~~~~~v~~v~~~~~~L~~~~-~~~~~~i~~~ 82 (218)
T 3edu_A 4 FQLKRETDDLEQWISEKELVASSPEMGQDFDHVTLLRDKFRDFARETGAIGQERVDNVNAFIERLIDAG-HSEAATIAEW 82 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcccccCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHcC-CCCHHHHHHH
Confidence 6899999999999999999986543 33446777888888662 345889999999999864 5789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|+.|...+..|...|+.+. .+.+|+..+.++..||.+++..+. ++++.+...++.+.+.++.++.++..+
T Consensus 83 ~~~l~~~W~~L~~~~~~R~~~L~~a~-~~~~F~~~~~e~~~Wl~ek~~~l~--~~~g~dl~~v~~l~~~h~~~e~dL~~~ 159 (218)
T 3edu_A 83 KDGLNEMWADLLELIDTRMQLLAASY-DLHRYFYTGAEILGLIDEKHRELP--EDVGLDASTAESFHRVHTAFERELHLL 159 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHCCC---------------CCSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhCC--CccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999997 567899999999999999999994 555777777777777777888888888
Q ss_pred hhhHHHHHhhhhHHHHHHhhcc-hhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q psy4475 610 KPKVSQISTLAAPIVKFLKKDG-LDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAM 665 (849)
Q Consensus 610 ~~~~~~i~~~~~~l~~~~~~~~-~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~ 665 (849)
...+..+...+..|. ..+| ++...|..+++.++.+| ...+..|..+|+.|+..
T Consensus 160 ~~~v~~l~~~a~~L~---~~~~~~~a~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~a~~~ 216 (218)
T 3edu_A 160 GVQVQQFQDVATRLQ---TAYAGEKAEAIQNKEQEVSAAWQALLDACAGRRTQLVDTADK 216 (218)
T ss_dssp HHHHHHHHHHHHHHH---TTCCHHHHHHHHHHHHHHHHHHHHHHHHTC------------
T ss_pred HHHHHHHHHHHHHHH---HHCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 777777777776543 2334 36789999999999999 78899999999998854
No 20
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.66 E-value=1.5e-14 Score=147.06 Aligned_cols=200 Identities=14% Similarity=0.221 Sum_probs=169.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhhccc--cCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHHH
Q psy4475 459 EQFTTLIMQIVGFITETTARVGEV--DGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQI 530 (849)
Q Consensus 459 ~qf~~~~~el~~wl~e~~~~~~~~--~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~l 530 (849)
++|..++.++..||.+++..+..- +..+++++..+++|..+ ....+..+...|+.|+...+.++...|+.++
T Consensus 3 q~F~~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~~~~~~~~~~~~g~~L~~~~~~~~~~~i~~~l 82 (214)
T 1s35_A 3 QAFLQDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDGHQDSYQRVKESGEKVIQGQTDPEYLLLGQRL 82 (214)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCCccHHHHHHHH
Confidence 689999999999999999998643 44455678888888765 2345889999999999876556789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhh
Q psy4475 531 ERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEK 610 (849)
Q Consensus 531 ~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~ 610 (849)
..|+..|..|......|...|+.++. +..|...+.++..||.++|..+.+.++ |.+...++.+.+.++.++..+....
T Consensus 83 ~~L~~~w~~L~~~~~~r~~~L~~~l~-l~~F~~~~~~~~~Wl~~~E~~l~~~~~-g~~~~~v~~llkkh~~f~~~l~~~~ 160 (214)
T 1s35_A 83 EGLDTGWDALGRMWESRSHTLAQCLG-FQEFQKDAKQAEAILSNQEYTLAHLEP-PDSLEAAEAGIRKFEDFLGSMENNR 160 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCC-CSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcccC-CCCHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999999999999986 788999999999999999999987655 7788888888899999999988887
Q ss_pred hhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy4475 611 PKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAK 663 (849)
Q Consensus 611 ~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~ 663 (849)
..+..+...+..| ....+++...|...+..+..+| ...+..|...|+.++
T Consensus 161 ~~i~~l~~~a~~L---~~~~h~~~~~I~~~~~~l~~rw~~l~~~~~~R~~~L~~~l 213 (214)
T 1s35_A 161 DKVLSPVDSGNKL---VAEGNLYSDKIKEKVQLIEDRHRKNNEKAQEASVLLRDNL 213 (214)
T ss_dssp HHHHHHHHHHHHH---HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHH---HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 7777777777754 3445677888999999999999 788999999998765
No 21
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=99.66 E-value=2.3e-14 Score=145.87 Aligned_cols=200 Identities=15% Similarity=0.200 Sum_probs=168.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc--cCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEV--DGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~--~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
..+|...+.++..||.+++..+... +....+|+..+++|..+ .+..|..++..|+.|+... +++...|..+
T Consensus 5 ~~~F~~~~~~l~~Wl~~~e~~l~~~~~g~dl~~v~~ll~kh~~le~~i~~~~~~v~~l~~~~~~L~~~~-~~~~~~i~~~ 83 (216)
T 1u5p_A 5 QQNFNTGIKDFDFWLSEVEALLASEDYGKDLASVNNLLKKHQLLEADISAHEDRLKDLNSQADSLMTSS-AFDTSQVKDK 83 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS-SSCTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCChHHHHHH
Confidence 4789999999999999999999654 44445678888888765 2345899999999999764 5789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|..|+..+..|+..|+.++. ..+|...++++..||.+++..+.+.+ +|++...++.+.+.++.++.++...
T Consensus 84 ~~~l~~~w~~L~~~~~~R~~~Le~~~~-l~qf~~~~~~~~~Wl~e~e~~~~~~~-~g~dl~~v~~ll~kh~~~~~el~~~ 161 (216)
T 1u5p_A 84 RETINGRFQRIKSMAAARRAKLNESHR-LHQFFRDMDDEESWIKEKKLLVSSED-YGRDLTGVQNLRKKHKRLEAELAAH 161 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTCCC-CCSSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHhHHHHHHHHhcCcc-cCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999987 46799999999999999999887654 4888999999999999999999999
Q ss_pred hhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy4475 610 KPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAK 663 (849)
Q Consensus 610 ~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~ 663 (849)
.+.+..+...+..|. ...+++...|...++.+..+| ...+..|...|+.++
T Consensus 162 ~~~i~~l~~~g~~L~---~~~~~~~~~i~~~~~~l~~~W~~L~~~~~~R~~~L~~al 215 (216)
T 1u5p_A 162 EPAIQGVLDTGKKLS---DDNTIGKEEIQQRLAQFVDHWKELKQLAAARGQRLEESL 215 (216)
T ss_dssp HHHHHHHHHHHHHHH---HTCSSCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---
T ss_pred HHHHHHHHHHHHHHH---hcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 888888888887654 344667788999999999999 788999999998875
No 22
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=99.64 E-value=1.3e-14 Score=151.04 Aligned_cols=214 Identities=15% Similarity=0.195 Sum_probs=172.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccC---CcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCc
Q psy4475 450 KLKSLLLLREQFTTLIMQIVGFITETTARVGEVDG---NSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQ 520 (849)
Q Consensus 450 ~l~~~l~~~~qf~~~~~el~~wl~e~~~~~~~~~~---~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~ 520 (849)
+++.+.....+|...+.++..||.++++++....+ ...+|+..+++|+.+ .+..++.|...|+.|+... +
T Consensus 8 R~~kLe~l~~~F~~~~~e~~~Wl~e~e~~l~~~~~~g~dl~~v~~llkkh~~~~~el~~~~~~v~~l~~~~~~L~~~~-~ 86 (250)
T 1quu_A 8 RLERLEHLAEKFRQKASTHETWAYGKEQILLQKDYESASLTEVRALLRKHEAFESDLAAHQDRVEQIAAIAQELNELD-Y 86 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-C
Confidence 34444444799999999999999999999965433 444678888998866 3456999999999999875 4
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHhhhcccccccHHHHH
Q psy4475 521 ESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWE-------QLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLT 593 (849)
Q Consensus 521 ~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~-------~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~ 593 (849)
++...|..++..|+.+|+.|...+..|...|++++...+ +|...++++..||.+++..+.+.++ +++...++
T Consensus 87 ~~~~~I~~r~~~l~~~W~~L~~~~~~R~~~L~~~l~~~~~~d~l~~qF~~~a~~~~~Wl~~~e~~l~~~~~-~~d~e~v~ 165 (250)
T 1quu_A 87 HDAVNVNDRCQKICDQWDRLGTLTQKRREALERMEKLLETIDQLHLEFAKRAAPFNNWMEGAMEDLQDMFI-VHSIEEIQ 165 (250)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCC-CCSTTTHH
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHhccccc-cCCHHHHH
Confidence 788999999999999999999999999999999998765 8999999999999999999998875 66778888
Q ss_pred HHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcch----hHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHH
Q psy4475 594 QNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGL----DLQKRITALELLSEEL---NSKLEEKGKEVQKAKAM 665 (849)
Q Consensus 594 ~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~----d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~ 665 (849)
.+.+.++.+..++..+......+..+...+..++...++ +.+.+...+..+..+| ...+..|...|+.++..
T Consensus 166 ~ll~~h~~~~~~l~~~~~~~~~i~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~W~~L~~~~~~R~~~L~~~l~~ 244 (250)
T 1quu_A 166 SLITAHEQFKATLPEADGERQSIMAIQNEVEKVIQSYNIRISSSNPYSTVTMDELRTKWDKVKQLVPIRDQSLQEELAR 244 (250)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHSCTTSCCSCTTCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCCCCCcccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888777766666665555444444433222 3445667788888899 78899999999998864
No 23
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.61 E-value=1.1e-13 Score=139.83 Aligned_cols=190 Identities=10% Similarity=0.077 Sum_probs=159.1
Q ss_pred HHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHH
Q psy4475 563 KLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALE 642 (849)
Q Consensus 563 ~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~ 642 (849)
..++++..||.++...+++.++ |.|...++.+.+.++.++.+|......+..+...+..+. |.+...+...+.
T Consensus 12 r~~~dl~~Wl~e~~~~l~s~d~-G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~------~~~~~~i~~rl~ 84 (210)
T 3pdy_A 12 RYLQDLLAWVEENQHRVDGAEW-GVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLS------PATRGAYRDCLG 84 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC------HHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHhccccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC------ccchHHHHHHHH
Confidence 4579999999999999999777 888999999999999999999998888888777666431 233345778888
Q ss_pred HHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-----CchHHHHHHHHHHHHHHhhHHH
Q psy4475 643 LLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTL-----PPQTLIQFIQQLEGELIDMKDK 714 (849)
Q Consensus 643 ~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~-----~~~~l~~~lq~Lq~Ei~~~~~~ 714 (849)
.+..+| ...+..|...|+ ..++|+.+++++..||.++|..+.+... ....++.+++.|..||.++.+.
T Consensus 85 ~l~~~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~~~Wl~eke~~~~s~d~g~~~~~v~~l~~k~~~f~~el~~~~~~ 160 (210)
T 3pdy_A 85 RLDLQYAKLLNSSKARLRSLE----SLHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKK 160 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHSCCSTTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHccccCCCchhHHHHHHHHHHHHHHHHHhHHH
Confidence 888888 788899999999 2379999999999999999999875431 1223457888999999999999
Q ss_pred HHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 715 LAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTG 765 (849)
Q Consensus 715 ~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~ 765 (849)
|..++..|..|+... || .+..|..+++.|+.+|..|...+..+..+|.+
T Consensus 161 v~~l~~~~~~Ll~~~-h~-~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk~ 209 (210)
T 3pdy_A 161 IKELQNAGDRLLRED-HP-ARPTVESFQAALQTQWSWMLQLCCCIEAHLKE 209 (210)
T ss_dssp HHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHcC-CC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999999999987 65 46689999999999999999999999888764
No 24
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.60 E-value=8.1e-15 Score=149.84 Aligned_cols=193 Identities=8% Similarity=0.079 Sum_probs=149.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHH
Q psy4475 560 QLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRIT 639 (849)
Q Consensus 560 ~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~ 639 (849)
.|...+.++..||.+++..+.+.++ |.|...++.+.+.++.++.++....+.+..+...+..+ . +.....|..
T Consensus 24 ~~~~~~~~l~~Wl~e~e~~l~s~d~-g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~----~--~~~~~~i~~ 96 (224)
T 2iak_A 24 VNMKFVQDLLNWVDEMQVQLDRTEW-GSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQM----T--APLKLSYTD 96 (224)
T ss_dssp HHC-CHHHHHHHHHHHHHHHHTCCC-CSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGC----C--TTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhcccc-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc----c--cchhHHHHH
Confidence 3444489999999999999999876 88889999999999999999999887777776544421 1 234567888
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC--ch---HHHHHHHHHHHHHHhh
Q psy4475 640 ALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP--PQ---TLIQFIQQLEGELIDM 711 (849)
Q Consensus 640 ~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~--~~---~l~~~lq~Lq~Ei~~~ 711 (849)
.+..+..+| ...+..|...|+ .+++|+.+++++..||.+++..+.+.+.. .. .+..+++.|+.||.+|
T Consensus 97 ~~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s~d~g~~l~~v~~L~~kh~~l~~el~~~ 172 (224)
T 2iak_A 97 KLHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVAYDWSERNSSVARKKSYHAELMRELEQK 172 (224)
T ss_dssp HHHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCC---------------CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhccccCCCchhHHHHHHHHHHHHHHHHHh
Confidence 899999999 788999999999 45699999999999999999988654321 11 2335677999999999
Q ss_pred HHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 712 KDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTG 765 (849)
Q Consensus 712 ~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~ 765 (849)
.+.|..|...|..|+..+ +| ++..|..+++.|+.+|..|...+..|...|++
T Consensus 173 ~~~v~~v~~~g~~L~~~~-h~-~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~~ 224 (224)
T 2iak_A 173 EESIKAVQEIAEQLLLEN-HP-ARLTIEAYRAAMQTQWSWILQLCQCVEQHIQE 224 (224)
T ss_dssp HHHHHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHHC--------
T ss_pred hHHHHHHHHHHHHHHHcC-CC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 999999999999999977 65 46689999999999999999999999998863
No 25
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.55 E-value=4.2e-13 Score=136.60 Aligned_cols=195 Identities=9% Similarity=0.154 Sum_probs=152.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHH
Q psy4475 558 WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKR 637 (849)
Q Consensus 558 ~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i 637 (849)
+..|...+.++..||.+++..+++.+. +.+...++.+...+..++.+|....+.+..+...+..|.. ..+++...|
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~e~-~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~---~~~~~~~~i 90 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSDEL-AKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLA---HGHYASPEI 90 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCC-CSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH---TTCTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCC-CCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHh---CCCCchHHH
Confidence 567999999999999999999987644 6777788777777778888777776667777666665432 334567889
Q ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH------HHHHHHHHHHHH
Q psy4475 638 ITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQT------LIQFIQQLEGEL 708 (849)
Q Consensus 638 ~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~~------l~~~lq~Lq~Ei 708 (849)
...+..|..+| ...+..|+..|+.++.. +.|..+++.+..||...|..+.+.+ .|.+ +..+++.|+.++
T Consensus 91 ~~~l~~L~~~w~~L~~~~~~R~~~L~q~l~l-~~F~~d~~~~~~WL~~~e~~L~~~~-~g~s~~~ve~ll~~h~~f~~~l 168 (218)
T 3fb2_A 91 KQKLDILDQERADLEKAWVQRRMMLDQCLEL-QLFHRDCEQAENWMAAREAFLNTED-KGDSLDSVEALIKKHEDFDKAI 168 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHCC--------------------CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhcCCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 99999999999 78899999999999975 7999999999999999999876543 2221 235677999999
Q ss_pred HhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 709 IDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERK 760 (849)
Q Consensus 709 ~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~ 760 (849)
.++.+.|..|...|..|+..+ ++ ++..|..++..|+.||..|...+.+|+
T Consensus 169 ~~~~~~v~~l~~~~~~L~~~~-h~-~~~~I~~~~~~l~~rW~~l~~~l~~rr 218 (218)
T 3fb2_A 169 NVQEEKIAALQAFADQLIAAG-HY-AKGDISSRRNEVLDRWRRLKAQMIEKR 218 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-CT-THHHHHHHHHHHHHHHHHHHHHC----
T ss_pred HhhHHHHHHHHHHHHHHHHcC-CC-CHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 999999999999999999886 55 577899999999999999999988775
No 26
>3fb2_A Spectrin alpha chain, brain spectrin; non-erythroid alpha chain alpha-II spectrin, fordrin alpha chain, sptan1, SPTA2_human, NESG, HR5563A; 2.30A {Homo sapiens}
Probab=99.54 E-value=2.7e-13 Score=138.02 Aligned_cols=169 Identities=11% Similarity=0.230 Sum_probs=136.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC--CchHH---HHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHH
Q psy4475 666 RAAYLTDVEKIGTWLQDAEAKIQDRTL--PPQTL---IQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQS 740 (849)
Q Consensus 666 ~~~f~~d~~~l~~WL~e~E~~l~~~~~--~~~~l---~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~ 740 (849)
++.|..++.++..||.+++..+...+. ++..+ ..+++.|+.+|.++.+.|..+...|..|+... +| ....|+.
T Consensus 15 ~~~F~~~~~~l~~Wl~~~~~~l~~~e~~~d~~~ve~ll~~H~~l~~ei~~~~~~~~~~~~~G~~Ll~~~-~~-~~~~i~~ 92 (218)
T 3fb2_A 15 LQRFLSDFRDLMSWINGIRGLVSSDELAKDVTGAEALLERHQEHRTEIDARAGTFQAFEQFGQQLLAHG-HY-ASPEIKQ 92 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCCCCSSSHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTT-CT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC-CC-chHHHHH
Confidence 468999999999999999999975432 22222 35678999999999999999999999999876 54 4668999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCC---chHHHHHHHHHHHHHHHHh
Q psy4475 741 TILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKRTFLSEPYDSN---NLSDLRVKLNSYTELTSFV 817 (849)
Q Consensus 741 ~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e~~~~~~~~~~---~l~~~~~~l~~~~~~~~~~ 817 (849)
++..|+.+|..|...+..|+..|++++. ++.|..++.++..||..++.++..+..+. ..+.+.++++.|...+...
T Consensus 93 ~l~~L~~~w~~L~~~~~~R~~~L~q~l~-l~~F~~d~~~~~~WL~~~e~~L~~~~~g~s~~~ve~ll~~h~~f~~~l~~~ 171 (218)
T 3fb2_A 93 KLDILDQERADLEKAWVQRRMMLDQCLE-LQLFHRDCEQAENWMAAREAFLNTEDKGDSLDSVEALIKKHEDFDKAINVQ 171 (218)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHCC-------------------CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHhhcCCCCCCCHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999996 79999999999999999998766554444 4456678999999999999
Q ss_pred hHhhHhhhhhhHHHHh-hccc
Q psy4475 818 NKHTRKVKDLSKNTQE-AYVS 837 (849)
Q Consensus 818 ~~~~~~l~~~~~~L~~-~~~~ 837 (849)
.+.+..|...|..|.. +++.
T Consensus 172 ~~~v~~l~~~~~~L~~~~h~~ 192 (218)
T 3fb2_A 172 EEKIAALQAFADQLIAAGHYA 192 (218)
T ss_dssp HHHHHHHHHHHHHHHHTTCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCC
Confidence 9999999999999999 7754
No 27
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.54 E-value=5.3e-13 Score=132.00 Aligned_cols=160 Identities=9% Similarity=0.184 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC--Cch---HHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHH
Q psy4475 666 RAAYLTDVEKIGTWLQDAEAKIQDRTL--PPQ---TLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQS 740 (849)
Q Consensus 666 ~~~f~~d~~~l~~WL~e~E~~l~~~~~--~~~---~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~ 740 (849)
++.|+.+++++..||.+++..+++.+. ++. .+..+|+.+..+|.+|.+.|..+...|..|+... +| .+..|+.
T Consensus 6 l~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~-~~-~~~~i~~ 83 (185)
T 3lbx_B 6 KFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQ-HQ-ASEEIRE 83 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CT-THHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CC-cHHHHHH
Confidence 468999999999999999999875432 111 2348899999999999999999999999999876 54 4678999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchH---HHHHHHHHHHHHHHHh
Q psy4475 741 TILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVSEKRTFLSEPYDSNNLS---DLRVKLNSYTELTSFV 817 (849)
Q Consensus 741 ~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~~~e~~~~~~~~~~~l~---~~~~~l~~~~~~~~~~ 817 (849)
++..|+.+|..|...+..|+.+|++++. ++.|..++..+..||..++.++..+..+.++. .+.++|.+|...+.+.
T Consensus 84 ~l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~~~Wl~~~e~~L~~~~~g~sl~~ve~LlkkH~~fe~~l~~~ 162 (185)
T 3lbx_B 84 KLQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVAEAWLIAQEPYLASGDFGHTVDSVEKLIKRHEAFEKSTASW 162 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHhHhhhccCCCCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999996 88999999999999999998877666666654 5668999999999999
Q ss_pred hHhhHhhhhhh
Q psy4475 818 NKHTRKVKDLS 828 (849)
Q Consensus 818 ~~~~~~l~~~~ 828 (849)
.+.+.+|..++
T Consensus 163 ~e~i~~L~~~t 173 (185)
T 3lbx_B 163 AERFAALEKPT 173 (185)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhhhH
Confidence 99998887654
No 28
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.46 E-value=2.6e-12 Score=134.93 Aligned_cols=176 Identities=13% Similarity=0.077 Sum_probs=144.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC-----chHHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCCh
Q psy4475 658 EVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLP-----PQTLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESN 732 (849)
Q Consensus 658 ~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~-----~~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~ 732 (849)
+|..+..+ ++|+.++++...||.+++......+.. ...++.+++.|+.||.+|++.|..|...|..|+... ||
T Consensus 3 rL~~l~~L-~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~-hp 80 (283)
T 3pe0_A 3 HMRSLESL-HSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED-HP 80 (283)
T ss_dssp ----CHHH-HHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-CT
T ss_pred hHHHHHHH-HHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CC
Confidence 45566655 499999999999999999986543321 112335689999999999999999999999999987 65
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhcCCCCCCch---HHHHHH
Q psy4475 733 EERALIQSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHFLSLHAEVMKWVS---EKRTFLSEPYDSNNL---SDLRVK 806 (849)
Q Consensus 733 ~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f~~~~~el~~Wl~---~~e~~~~~~~~~~~l---~~~~~~ 806 (849)
.+..|..+++.|+..|..|...+..|..+|+++.. +++|+.+++++..||. ++.....++..+.++ ..+.++
T Consensus 81 -~~~~I~~r~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~g~d~~s~~~LLkk 158 (283)
T 3pe0_A 81 -ARPTVESFQAALQTQWSWMLQLCCCIEAHLKENAA-YFQFFSDVREAEGQLQKLQEALRRKYSCDRSATVTRLEDLLQD 158 (283)
T ss_dssp -THHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHTCC
T ss_pred -ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCCHHHHHHHHHH
Confidence 57789999999999999999999999999999996 8899999999999887 666666666666655 445588
Q ss_pred HHHHHHHHHHhhHhhHhhhhhhHHHHh-hccc
Q psy4475 807 LNSYTELTSFVNKHTRKVKDLSKNTQE-AYVS 837 (849)
Q Consensus 807 l~~~~~~~~~~~~~~~~l~~~~~~L~~-~~~~ 837 (849)
|+.+...+......+..|..-++.|.. ++..
T Consensus 159 h~~le~~l~~~~~~i~~L~~~a~~l~~l~~r~ 190 (283)
T 3pe0_A 159 AQDEKEQLNEYKGHLSGLAKRAKAVVQLKPRH 190 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCCCCGGGS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhcccCCC
Confidence 999999999999999999999988887 4433
No 29
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.40 E-value=2.5e-12 Score=123.63 Aligned_cols=133 Identities=12% Similarity=0.197 Sum_probs=114.4
Q ss_pred hhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHH---HHHHHHH
Q psy4475 632 LDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRT-LPPQTL---IQFIQQL 704 (849)
Q Consensus 632 ~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~-~~~~~l---~~~lq~L 704 (849)
.+...|..+++.+..+| ...+..|+.+|+.++. +++|+.|++++..||.+++..+.+.. .++..+ ..+|+.|
T Consensus 22 e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~~-lq~F~~d~~el~~Wi~ek~~~a~~~~~~d~~~v~~ll~kH~af 100 (161)
T 3lbx_A 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSYH-LQVFKRDADDLGKWIMEKVNILTDKSYEDPTNIQGKYQKHQSL 100 (161)
T ss_dssp CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHhhhccCCCcCCHHHHHHHHHHHHHH
Confidence 45566778888888888 7889999999999995 56999999999999999999876532 223333 3678899
Q ss_pred HHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 705 EGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD 767 (849)
Q Consensus 705 q~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l 767 (849)
+.||.+|.+.+..|...|+.|+... +..+..|+.+++.|+.+|..|...+..|...|++++
T Consensus 101 e~El~a~~~~~~~l~~~g~~Li~~~--~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 101 EAEVQTKSRLMSELEKTREERFTMG--HSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCTT--CTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC--CCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999876 456789999999999999999999999999998864
No 30
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=99.38 E-value=2.2e-11 Score=122.82 Aligned_cols=187 Identities=12% Similarity=0.135 Sum_probs=147.6
Q ss_pred HHHHHHHHHHHHHHHhhhc--cccCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHHHHHH
Q psy4475 462 TTLIMQIVGFITETTARVG--EVDGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQIERI 533 (849)
Q Consensus 462 ~~~~~el~~wl~e~~~~~~--~~~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~l~~L 533 (849)
++.++++..||.++...+. +++.+.++++..+++|..+ .+..|+.++..+..+.. .....|..++..|
T Consensus 11 ~r~~~dl~~Wl~e~~~~l~s~d~G~Dl~~ve~llkkH~~le~ei~~~~~~v~~l~~~a~~l~~----~~~~~i~~rl~~l 86 (210)
T 3pdy_A 11 LRYLQDLLAWVEENQHRVDGAEWGVDLPSVEAQLGSHRGLHQSIEEFRAKIERARSDEGQLSP----ATRGAYRDCLGRL 86 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSCH----HHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHhcccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCc----cchHHHHHHHHHH
Confidence 6678999999999999985 5555667899999999865 22346666666655532 2345699999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhH
Q psy4475 534 NDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKV 613 (849)
Q Consensus 534 ~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~ 613 (849)
..+|..|+..+..|...|+ ...+|...+.++..||.+++..+.+.++ +.+...+..+.+.++.++.++......+
T Consensus 87 ~~~~~~L~~~a~~R~~~L~----~L~~f~~~~~~~~~Wl~eke~~~~s~d~-g~~~~~v~~l~~k~~~f~~el~~~~~~v 161 (210)
T 3pdy_A 87 DLQYAKLLNSSKARLRSLE----SLHSFVAAATKELMWLNEKEEEEVGFDW-SDRNTNMTAKKESYSALMRELELKEKKI 161 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHSCC-STTSCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHcccc-CCCchhHHHHHHHHHHHHHHHHHhHHHH
Confidence 9999999999999999999 3367888999999999999999998766 5455567777777888888888887778
Q ss_pred HHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q psy4475 614 SQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQ 660 (849)
Q Consensus 614 ~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le 660 (849)
..+...+..|. ...++....|...++.++.+| .+.+.-|...|+
T Consensus 162 ~~l~~~~~~Ll---~~~h~~~~~I~~~~~~l~~~W~~L~~L~~~~e~hLk 208 (210)
T 3pdy_A 162 KELQNAGDRLL---REDHPARPTVESFQAALQTQWSWMLQLCCCIEAHLK 208 (210)
T ss_dssp HHHHHHHHHHH---HTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHH---HcCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 88888887653 344678899999999999999 566666666654
No 31
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=99.34 E-value=2.5e-11 Score=115.15 Aligned_cols=130 Identities=14% Similarity=0.213 Sum_probs=112.4
Q ss_pred hhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCchHH---HHHHHHH
Q psy4475 632 LDLQKRITALELLSEEL---NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRT-LPPQTL---IQFIQQL 704 (849)
Q Consensus 632 ~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~-~~~~~l---~~~lq~L 704 (849)
.....|...++.+..+| ...+..|..+|+.++. +++|+.|++++..||.+++..+.+.. .++..+ ..+|+.|
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~af 90 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAF 90 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHH
Confidence 34567888899999999 8999999999999996 57999999999999999999876432 223332 3678899
Q ss_pred HHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 705 EGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKKEVT 764 (849)
Q Consensus 705 q~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le 764 (849)
+.||.+|.+.+..|...|..|+... + ..+..|+.+++.|+.+|..|...+..|...|.
T Consensus 91 e~El~a~~~~l~~v~~~g~~Li~~~-~-~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 91 EAEVQANSGAIVKLDETGNLMISEG-H-FASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHT-C-TTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC-C-CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999986 4 56789999999999999999999999999885
No 32
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=99.32 E-value=1.9e-11 Score=124.66 Aligned_cols=191 Identities=10% Similarity=0.132 Sum_probs=133.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccc--cCCcccHHHHHHHHHHHh------HHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEV--DGNSATVQEKIDKYDKEN------QSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~--~~~~~~ve~~~~k~~~~~------q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
...|.+.+.++..||.+++..+... +...++|+..+++|..+. +..|+.++..+..+. + +.+..|..+
T Consensus 22 a~~~~~~~~~l~~Wl~e~e~~l~s~d~g~Dl~~v~~ll~kh~~~e~ei~~~~~~v~~~~~~~~~~~---~-~~~~~i~~~ 97 (224)
T 2iak_A 22 EEVNMKFVQDLLNWVDEMQVQLDRTEWGSDLPSVESHLENHKNVHRAIEEFESSLKEAKISEIQMT---A-PLKLSYTDK 97 (224)
T ss_dssp HHHHC-CHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHGGGCC---T-THHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc---c-chhHHHHHH
Confidence 4556666899999999999998644 445567888899988662 234555554333332 1 457889999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+.+|..|...+..|...|+ ...+|...+.++..||.++++.+.+.++ |.+...++.+.+.++.++.++...
T Consensus 98 ~~~l~~~~~~L~~~~~~R~~~Le----~l~~F~~~~~~~~~Wi~eke~~~~s~d~-g~~l~~v~~L~~kh~~l~~el~~~ 172 (224)
T 2iak_A 98 LHRLESQYAKLLNTSRNQERHLD----TLHNFVTRATNELIWLNEKEESEVAYDW-SERNSSVARKKSYHAELMRELEQK 172 (224)
T ss_dssp HHHHHHHHHHTTTHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHCCC----------------CSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhcccc-CCCchhHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 4567999999999999999999988776 667777777777788888888888
Q ss_pred hhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q psy4475 610 KPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQ 660 (849)
Q Consensus 610 ~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le 660 (849)
.+.+..|...+..|.. ..+++...|...++.+..+| ...+..|...|+
T Consensus 173 ~~~v~~v~~~g~~L~~---~~h~~~~~I~~~~~~l~~~W~~L~~l~~~R~~~L~ 223 (224)
T 2iak_A 173 EESIKAVQEIAEQLLL---ENHPARLTIEAYRAAMQTQWSWILQLCQCVEQHIQ 223 (224)
T ss_dssp HHHHHHHHHHHHHHHH---TTCTTHHHHHHHHHHHHHHHHHHHHHHC-------
T ss_pred hHHHHHHHHHHHHHHH---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7777778777776543 44677888999999999999 777888888775
No 33
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=99.29 E-value=5.4e-11 Score=108.22 Aligned_cols=106 Identities=18% Similarity=0.265 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCchH---H---HHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCC-ChHHHHHH
Q psy4475 666 RAAYLTDVEKIGTWLQDAEAKIQDRTLPPQT---L---IQFIQQLEGELIDMKDKLAQMTRTGNEISQHTE-SNEERALI 738 (849)
Q Consensus 666 ~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~~---l---~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~-~~~e~~~i 738 (849)
++.|+.+++++..||.++|..+....+++.+ + ..+++.|+.||.+|++.|..++..|..|+..+. +++++..|
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~i 83 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFEI 83 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHHH
Confidence 3689999999999999999999876555443 2 246679999999999999999999999987542 45677889
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWK 771 (849)
Q Consensus 739 ~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~ 771 (849)
+.++..|+.||..|+..+.+|...|+.++..++
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~L~~aL~~~Q 116 (118)
T 3uul_A 84 QEQMTLLNARWEALRVESMERQSRLHDALMELQ 116 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999997554
No 34
>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}
Probab=99.28 E-value=1.2e-10 Score=122.29 Aligned_cols=161 Identities=13% Similarity=0.153 Sum_probs=128.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc--cccCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVG--EVDGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~--~~~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
..+|++++++...||.+++.+.. |++....++..+.++|+.+ .+..++.|...|+.|+... ++.+..|+.+
T Consensus 10 L~qF~~d~~~e~~Wi~Eke~~~~~~D~~~~~~~l~~~~~kh~~le~El~a~e~~v~~v~~~g~~L~~~~-hp~~~~I~~r 88 (283)
T 3pe0_A 10 LHSFVAAATKELMWLNEKEEEEVGFDWSDRNTNMTAKKESYSALMRELELKEKKIKELQNAGDRLLRED-HPARPTVESF 88 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCCSTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC-CTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHhhcCCchhhHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC-CCChHHHHHH
Confidence 37999999999999999999863 3333333477787888765 3446899999999999865 5899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhhhcccccccHHHHHHHHHHHHHHHhhH
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLK---GVETSVEQCDGVVHSLAVLTQNKSELESLLGTV 606 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~---~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v 606 (849)
+..|+..|+.|...+..|...|+++.. ..+|...+.+++.||. ++...+.+.++ |+|...++.+.+.++.++.++
T Consensus 89 ~~~L~~~W~~L~~l~~~R~~~L~~a~~-~~qF~~da~e~e~Wl~~~~e~~~~~~s~d~-g~d~~s~~~LLkkh~~le~~l 166 (283)
T 3pe0_A 89 QAALQTQWSWMLQLCCCIEAHLKENAA-YFQFFSDVREAEGQLQKLQEALRRKYSCDR-SATVTRLEDLLQDAQDEKEQL 166 (283)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHSCC-CSHHHHHHHHTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhcCCcc-CCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999986 4678888999999887 77777888777 777777777776666666666
Q ss_pred HhhhhhHHHHHhhhh
Q psy4475 607 ESEKPKVSQISTLAA 621 (849)
Q Consensus 607 ~~l~~~~~~i~~~~~ 621 (849)
......+..+...+.
T Consensus 167 ~~~~~~i~~L~~~a~ 181 (283)
T 3pe0_A 167 NEYKGHLSGLAKRAK 181 (283)
T ss_dssp HHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHH
Confidence 666555555554443
No 35
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=99.28 E-value=4.8e-11 Score=108.69 Aligned_cols=108 Identities=13% Similarity=0.199 Sum_probs=91.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCch---HH---HHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcC-CChHHHHHH
Q psy4475 666 RAAYLTDVEKIGTWLQDAEAKIQDRTLPPQ---TL---IQFIQQLEGELIDMKDKLAQMTRTGNEISQHT-ESNEERALI 738 (849)
Q Consensus 666 ~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~---~l---~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~-~~~~e~~~i 738 (849)
+++|+.+++++..||.++|..+....++|. .+ ..+++.|+.||.+|.+.|..++..|..|+... .+|+++..|
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~i 83 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETEV 83 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHHH
Confidence 469999999999999999999876544433 22 24667999999999999999999999998643 156677899
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 739 QSTILSFTEQMQQIEMKLNERKKEVTGCDDAWKHF 773 (849)
Q Consensus 739 ~~~l~~L~~rW~~L~~~~~~r~~~Le~~l~~~~~f 773 (849)
+.++..|+.||..|+..+.+|...|+.++..++.|
T Consensus 84 ~~~l~~l~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 84 QEQMNLLNSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999877665
No 36
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=99.25 E-value=3.7e-10 Score=111.43 Aligned_cols=160 Identities=11% Similarity=0.158 Sum_probs=132.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcc--ccCCcccHHHHHHHHHHH------hHHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGE--VDGNSATVQEKIDKYDKE------NQSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~--~~~~~~~ve~~~~k~~~~------~q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
..+|...+.++..||.++...+.. ++..+++++..+++|..+ .+..+..+...|+.|+... ++....|+.+
T Consensus 6 l~~F~~~~~dl~~Wl~~~~~~l~~~e~~~d~~~~e~ll~~H~~~~~ei~~~~~~~~~l~~~G~~L~~~~-~~~~~~i~~~ 84 (185)
T 3lbx_B 6 KFRFFSMARDLLSWMESIIRQIETQERPRDVSSVELLMKYHQGINAEIETRSKNFSACLELGESLLQRQ-HQASEEIREK 84 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCC--CCSSSCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT-CTTHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCcCCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhcC-CCcHHHHHHH
Confidence 478999999999999999998854 344555677777777755 2335888999999999875 4788999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh
Q psy4475 530 IERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE 609 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l 609 (849)
+..|+..|+.|......|...|+.++. ...|...+..+..||...+..+.+.+ +|.+...+..+.+.++.+...+...
T Consensus 85 l~~L~~~w~~L~~~w~~r~~~L~~~l~-l~~F~~d~~~~~~Wl~~~e~~L~~~~-~g~sl~~ve~LlkkH~~fe~~l~~~ 162 (185)
T 3lbx_B 85 LQQVMSRRKEMNEKWEARWERLRMLLE-VCQFSRDASVAEAWLIAQEPYLASGD-FGHTVDSVEKLIKRHEAFEKSTASW 162 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHhHHHHHHHHHHhHhhhccCC-CCCCHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999985 45799999999999999999998754 4778888998889999998888887
Q ss_pred hhhHHHHHhhh
Q psy4475 610 KPKVSQISTLA 620 (849)
Q Consensus 610 ~~~~~~i~~~~ 620 (849)
...+..+..+.
T Consensus 163 ~e~i~~L~~~t 173 (185)
T 3lbx_B 163 AERFAALEKPT 173 (185)
T ss_dssp HHHHHHHHSCC
T ss_pred HHHHHHHhhhH
Confidence 66666555433
No 37
>3lbx_A Spectrin alpha chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens} PDB: 1owa_A
Probab=99.12 E-value=5.5e-10 Score=107.18 Aligned_cols=137 Identities=11% Similarity=0.111 Sum_probs=117.8
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHH
Q psy4475 521 ESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELE 600 (849)
Q Consensus 521 ~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~ 600 (849)
.++..|+.++..|+.+|+.|...+..|..+|+++. ...+|...+.++..||.+++..+.+.++ ++...++.+.+.++
T Consensus 22 e~a~~I~~r~~~l~~rw~~L~~~a~~R~~~Le~s~-~lq~F~~d~~el~~Wi~ek~~~a~~~~~--~d~~~v~~ll~kH~ 98 (161)
T 3lbx_A 22 ETAEEIQERRQEVLTRYQSFKERVAERGQKLEDSY-HLQVFKRDADDLGKWIMEKVNILTDKSY--EDPTNIQGKYQKHQ 98 (161)
T ss_dssp CCSTTGGGHHHHGGGHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHTTSC--CSCCCHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhhccCCCc--CCHHHHHHHHHHHH
Confidence 46778999999999999999999999999999999 5678999999999999999988766544 56777888888888
Q ss_pred HHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy4475 601 SLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQKAK 663 (849)
Q Consensus 601 ~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~ 663 (849)
.++.++.+....+..|...+..| +...|.....|...++.|+.+| ...+..|...|++|+
T Consensus 99 afe~El~a~~~~~~~l~~~g~~L---i~~~~~~~~~I~~rl~eL~~~W~~L~~~~~~R~~~L~eAl 161 (161)
T 3lbx_A 99 SLEAEVQTKSRLMSELEKTREER---FTMGHSAHEETKAHIEELRHLWDLLLELTLEKGDQLLRAL 161 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH---SCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH---HhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 88888888888888888777653 4455778899999999999999 788999999998864
No 38
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=98.99 E-value=6.4e-09 Score=98.43 Aligned_cols=134 Identities=13% Similarity=0.169 Sum_probs=114.7
Q ss_pred cChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHH
Q psy4475 521 ESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELE 600 (849)
Q Consensus 521 ~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~ 600 (849)
+.+..|+.++..|..+|..|+..+..|..+|+++.. .++|...+.++..||.+++..+.+.++ ++...++.....++
T Consensus 12 ~~a~~I~~r~~~l~~r~~~L~~~a~~R~~~Le~s~~-l~~F~~d~~el~~Wi~ek~~~~~~~~~--~d~~~v~~~l~kH~ 88 (149)
T 3f31_A 12 ETAEDIQERRQQVLDRYHRFKELSTLRRQKLEDSYR-FQFFQRDAEELEKWIQEKLQIASDENY--KDPTNLQGKLQKHQ 88 (149)
T ss_dssp -CTTHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTTSCSS--CSSSCHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHcCccc--CCHHHHHHHHHHHH
Confidence 567789999999999999999999999999999995 789999999999999999998765433 46677777778888
Q ss_pred HHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHH---HHHHHHHHHHHH
Q psy4475 601 SLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEEL---NSKLEEKGKEVQ 660 (849)
Q Consensus 601 ~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le 660 (849)
.++.++.+....+..|...+..|.. ..|.+...|...++.++.+| ...+..|...|.
T Consensus 89 afe~El~a~~~~l~~v~~~g~~Li~---~~~~~~~~I~~rl~~l~~~W~~L~~~~~~r~~~L~ 148 (149)
T 3f31_A 89 AFEAEVQANSGAIVKLDETGNLMIS---EGHFASETIRTRLMELHRQWELLLEKMREKGIKLL 148 (149)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHH---HTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh---cCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9999999988888888888876543 34778899999999999999 777888888774
No 39
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=98.94 E-value=7e-09 Score=94.20 Aligned_cols=113 Identities=19% Similarity=0.270 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCHHHHHHhhhhhHHHHHhhhhhHHHHHHHhhhhHHHhhcC--CccChHH
Q psy4475 42 HRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTTGEVVLAST--SPDGQTA 119 (849)
Q Consensus 42 ~q~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~~~~e~~l~~~q~l~~~~~~~~~~~~~l~~~ge~~~~~~--s~~~~~~ 119 (849)
.++|..++++|.+||.+++..|.+..+ ++.++..++..+.+.+.|...+..|...++.++.+|+.++.+. ++++...
T Consensus 4 L~~F~~~l~el~~WL~~~e~~l~~~~~-~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~~~~~g~~L~~~~~~~~~~~~~ 82 (119)
T 3uun_A 4 LDRYQTALEEVLSWLLSAEDTLQAQGE-ISNDVEVVKDQFHTHEGYMMDLTAHQGRVGNILQLGSKLIGTGKLSEDEETE 82 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCS-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCC-CCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCCHHHHHH
Confidence 479999999999999999999988754 4678889999999999999999999999999999999999754 3444568
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHhhhh
Q psy4475 120 VKNEMKALNMKMHWIDLLNKLEHEKNRLGAAIQAGEAA 157 (849)
Q Consensus 120 i~~~l~~l~~~~~w~~l~~~l~~~~~~le~~~~~~~~~ 157 (849)
|+.++..| +.+|+.|...+..|+.+|+.++..+..+
T Consensus 83 i~~~l~~l--~~rw~~L~~~~~~R~~~Le~aL~~~Q~~ 118 (119)
T 3uun_A 83 VQEQMNLL--NSRWECLRVASMEKQSNLHRVLMDLQNQ 118 (119)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999 8899999999999999999998876543
No 40
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=98.91 E-value=1.3e-08 Score=92.36 Aligned_cols=110 Identities=19% Similarity=0.297 Sum_probs=98.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCHHHHHHhhhhhHHHHHhhhhhHHHHHHHhhhhHHHhhcCC--ccChHH
Q psy4475 42 HRVYKEACDELLTWLTRARDKIPSMKQKSLSDKLAIENIVAPLESLLNKKAQGELLVEHMQTTGEVVLASTS--PDGQTA 119 (849)
Q Consensus 42 ~q~f~~~~~~l~~Wl~~~~~~l~~~~~~~~~~~~~~e~~l~~~q~l~~~~~~~~~~~~~l~~~ge~~~~~~s--~~~~~~ 119 (849)
.+.|+.++++|.+||.+++..|.+..| ++.++..+...+.+.+.|...+..|.+.++.++..|+.++.... +.+...
T Consensus 4 L~~f~~~l~el~~WL~e~e~~l~~~~~-~~~d~~~v~~~l~~h~~l~~ei~~~~~~v~~v~~~g~~L~~~~~~~~~~~~~ 82 (118)
T 3uul_A 4 LDSYQIALEEVLTWLLSAEDTFQEQDD-ISDDVEDVKEQFATHETFMMELSAHQSSVGSVLQAGNQLMTQGTLSDEEEFE 82 (118)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTSCC-CCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChhHHHH
Confidence 478999999999999999999988754 57788889999999999999999999999999999999997543 334557
Q ss_pred HHHHHHHhhhhhhHHHHHHHHHHHHhHHHHHHHHh
Q psy4475 120 VKNEMKALNMKMHWIDLLNKLEHEKNRLGAAIQAG 154 (849)
Q Consensus 120 i~~~l~~l~~~~~w~~l~~~l~~~~~~le~~~~~~ 154 (849)
|+.++..| +.+|+.|+..+..|+.+|+.++..+
T Consensus 83 i~~~l~~l--~~rw~~L~~~~~~R~~~L~~aL~~~ 115 (118)
T 3uul_A 83 IQEQMTLL--NARWEALRVESMERQSRLHDALMEL 115 (118)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 8899999999999999999988654
No 41
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.67 E-value=1.9e-07 Score=82.88 Aligned_cols=97 Identities=14% Similarity=0.275 Sum_probs=83.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcC----CCCc-hHHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHH
Q psy4475 666 RAAYLTDVEKIGTWLQDAEAKIQDR----TLPP-QTLIQFIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQS 740 (849)
Q Consensus 666 ~~~f~~d~~~l~~WL~e~E~~l~~~----~~~~-~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~ 740 (849)
++.|..+++.+..||.+.|..+... +... ..+..+|+.|+.+|.++.+.|..|...|..|+... ..++..|..
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~--h~~~~~I~~ 82 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQN--HYASNLVDE 82 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC--CCCHHHHHH
Confidence 4689999999999999999887532 1111 23458899999999999999999999999999886 456789999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 741 TILSFTEQMQQIEMKLNERKKEVT 764 (849)
Q Consensus 741 ~l~~L~~rW~~L~~~~~~r~~~Le 764 (849)
++..|..||..|...+..|+..|+
T Consensus 83 r~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 83 KRKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999875
No 42
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.56 E-value=4.8e-07 Score=110.13 Aligned_cols=223 Identities=9% Similarity=0.079 Sum_probs=146.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhh-hhhHHHHHhhhhHHHH
Q psy4475 547 RREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESE-KPKVSQISTLAAPIVK 625 (849)
Q Consensus 547 R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l-~~~~~~i~~~~~~l~~ 625 (849)
|...|..+.. ..+|.....++..|+......+..... +.+...++.+......+......- ......+..+-..+.+
T Consensus 758 R~~~l~~~~~-~iQY~~~a~~L~~WIr~kqa~l~~r~~-~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqt 835 (1010)
T 1g8x_A 758 REQRLGSEQT-KSDYLKRANELVQWINDKQASLESRDF-GDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQT 835 (1010)
T ss_dssp HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHCCCC-CSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhhc-cccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHH
Confidence 3444444443 346888889999999999988877654 445666666655544443321110 0111122222222222
Q ss_pred HHhhc--chhHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy4475 626 FLKKD--GLDLQKRITALELLSEEL---NSKLEEKGKEVQKAKA-------MRAAYLTDVEKIGTWLQDAEAKIQDRTLP 693 (849)
Q Consensus 626 ~~~~~--~~d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~~-------~~~~f~~d~~~l~~WL~e~E~~l~~~~~~ 693 (849)
.+... ++-.....-.+..|..+| .....+|...|..++. ++++|...++.+..||.+++..+.+....
T Consensus 836 klrl~~r~~~~p~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~g 915 (1010)
T 1g8x_A 836 KLRLIKREPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNETG 915 (1010)
T ss_dssp HHHTTTCCCCCCCTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCSC
T ss_pred HHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 22110 100000111245666677 4555666666666533 46899999999999999999999753211
Q ss_pred ----ch-HHHHHHHHHHHHHHhhHHHHH-HHHHHHhHhhhcCCChHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH
Q psy4475 694 ----PQ-TLIQFIQQLEGELIDMKDKLA-QMTRTGNEISQHTESNEERALIQSTILSFT-EQMQQIEMKLNERKKEVTGC 766 (849)
Q Consensus 694 ----~~-~l~~~lq~Lq~Ei~~~~~~~~-~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~-~rW~~L~~~~~~r~~~Le~~ 766 (849)
+. .+..+|++++.+|.+|++.+. .|...|+.|.... +.++..|..|.+.|. ++|..|...+..|+..|+++
T Consensus 916 ~dL~~Vqal~KKhea~e~dl~a~e~ri~~~l~~~a~eL~~~~--y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~ 993 (1010)
T 1g8x_A 916 DSITAVQAKLKNLEAFDGECQSLEGQSNSDLLSILAQLTELN--YNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAE 993 (1010)
T ss_dssp CSTTTTGGGTTSHHHHTTTTTHHHHTHHHHHHHHHHHHHHTT--CTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 123678999999999999999 9999999998875 456789999999996 89999999999999999999
Q ss_pred HHHHHHH
Q psy4475 767 DDAWKHF 773 (849)
Q Consensus 767 l~~~~~f 773 (849)
+...+.|
T Consensus 994 lq~~~~~ 1000 (1010)
T 1g8x_A 994 LERLQKI 1000 (1010)
T ss_dssp TSTTTTT
T ss_pred HHHHHHH
Confidence 9744333
No 43
>2spc_A Spectrin; cytoskeleton; 1.80A {Drosophila melanogaster} SCOP: a.7.1.1
Probab=98.44 E-value=5.8e-07 Score=79.71 Aligned_cols=94 Identities=14% Similarity=0.266 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhc--cccCCcccHHHHHHHHHHHh------HHHHHHHHHHHHHhcccCCccChHHHHHH
Q psy4475 458 REQFTTLIMQIVGFITETTARVG--EVDGNSATVQEKIDKYDKEN------QSEIDMLNDVWKEIKPKADQESDQLIEDQ 529 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~--~~~~~~~~ve~~~~k~~~~~------q~el~~v~~~g~~L~~~~~~~~~~~I~~~ 529 (849)
.++|.+++.++..||.+.+..+. +++.+..+|+..+++|+++. ...+..|...|+.|+... ++++..|..+
T Consensus 5 lq~F~~d~~~~e~Wl~~~e~~l~~~d~g~~l~~v~~Llkkh~~fe~~~~~~~~~i~~l~~~a~~L~~~~-h~~~~~I~~r 83 (107)
T 2spc_A 5 LQLYMRDCELAESWMSAREAFLNADDDANAGGNVEALIKKHEDFDKAINGHEQKIAALQTVADQLIAQN-HYASNLVDEK 83 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-CCCHHHHHHH
Confidence 47999999999999999998874 55667778999999999872 335888999999999864 5899999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 530 IERINDQWNTLVGDLDTRREKLT 552 (849)
Q Consensus 530 l~~L~~~W~~L~~~~~~R~~~Le 552 (849)
+..|..+|+.|...+..|+..|+
T Consensus 84 ~~~l~~~w~~L~~~~~~Rr~~L~ 106 (107)
T 2spc_A 84 RKQVLERWRHLKEGLIEKRSRLG 106 (107)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999998874
No 44
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.43 E-value=8.6e-05 Score=74.80 Aligned_cols=195 Identities=10% Similarity=0.066 Sum_probs=128.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHH-hhhhhHHHHHhhhhHHHHHHhhc---chh
Q psy4475 558 WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVE-SEKPKVSQISTLAAPIVKFLKKD---GLD 633 (849)
Q Consensus 558 ~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~-~l~~~~~~i~~~~~~l~~~~~~~---~~d 633 (849)
|..|..-+.+|..|+..+...+.+-.. +.+...++.+...+..++..-. ........+..+-..|.+.+... |++
T Consensus 13 ~~eYe~~as~Ll~WI~~~~~~l~~r~f-~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~ppe 91 (235)
T 2odv_A 13 WQEYRELVLLLLQWMRHHTAAFEERRF-PSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKVPP 91 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-C-CSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCC
Confidence 467888899999999999998887654 4455666555544444332111 00011122222222233333321 111
Q ss_pred HHHHHHHHHHHHHHH---HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCCchHHHH
Q psy4475 634 LQKRITALELLSEEL---NSKLEEKGKEVQKA-------KAMRAAYLTDVEKIGTWLQDAEAKIQ----DRTLPPQTLIQ 699 (849)
Q Consensus 634 ~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a-------~~~~~~f~~d~~~l~~WL~e~E~~l~----~~~~~~~~l~~ 699 (849)
. -.+.+++..| ......|...|... -.++..|...++.+..||.+++..+. ..... ..+ .
T Consensus 92 g----~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~d~~~l~~~-~a~-k 165 (235)
T 2odv_A 92 G----YHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQSDVRLLAAG-KVP-Q 165 (235)
T ss_dssp T----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT-CCC-S
T ss_pred C----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchh-HHH-H
Confidence 1 1134566667 33344455544444 23457999999999999999999993 22211 113 5
Q ss_pred HHHHHHHHHHhhHHHHHHHHHHHhHhhhcCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 700 FIQQLEGELIDMKDKLAQMTRTGNEISQHTESNEERALIQSTILSFTEQMQQIEMKLNERKK 761 (849)
Q Consensus 700 ~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~~~~~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~ 761 (849)
++..+..+|.+++..|..+...++.|.... ++++..|..+...|..+|..|...+..|..
T Consensus 166 ~~e~ie~dL~~~e~~i~~l~~~a~~L~~~~--y~~a~~i~~r~~~l~~~w~~L~~~~~~r~~ 225 (235)
T 2odv_A 166 RAGEVERDLDKADSMIRLLFNDVQTLKDGR--HPQGEQMYRRVYRLHKRLVAIRTEYNLRLK 225 (235)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CTTHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCC--CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 688999999999999999999999998764 557889999999999999999999888765
No 45
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=98.35 E-value=2e-06 Score=104.79 Aligned_cols=210 Identities=11% Similarity=0.128 Sum_probs=149.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhcccc--CCcccHHHHHHHHHHHhH----------HHHHHHHHHHHHhcccC-CccChH
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEVD--GNSATVQEKIDKYDKENQ----------SEIDMLNDVWKEIKPKA-DQESDQ 524 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~~--~~~~~ve~~~~k~~~~~q----------~el~~v~~~g~~L~~~~-~~~~~~ 524 (849)
..||.....++..||..+...+..-. .....++..+++|..+.. .+++.+....+..+... .++-..
T Consensus 768 ~iQY~~~a~~L~~WIr~kqa~l~~r~~~~sl~~IQ~ll~~f~~fk~~~kp~r~~ek~~Le~l~~~iqtklrl~~r~~~~p 847 (1010)
T 1g8x_A 768 KSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIKREPFVA 847 (1010)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhccccHHHHHHHHHHHHHHHhccCChhHHHHHHHHHHHHHHHHHHHhcCCCCCCC
Confidence 36899999999999999998875433 233456667777665521 12433322222222111 111111
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHH
Q psy4475 525 LIEDQIERINDQWNTLVGDLDTRREKLTELAEQ-------WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKS 597 (849)
Q Consensus 525 ~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~-------~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~ 597 (849)
.....+..|+..|..|.....+|...|...+.. .++|...++..+.||.+++..+++.++ +.+...++.+.+
T Consensus 848 ~~gl~~~dL~~~W~~Le~ae~eRe~~L~~el~Rqe~L~~L~qkF~rka~~~e~Wl~ek~~~l~s~d~-g~dL~~Vqal~K 926 (1010)
T 1g8x_A 848 PAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNET-GDSITAVQAKLK 926 (1010)
T ss_dssp CTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSCCS-CCSTTTTGGGTT
T ss_pred ccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-cccHHHHHHHHH
Confidence 133457799999999999999999999887543 578999999999999999999998765 666777777777
Q ss_pred HHHHHHhhHHhhhhhHH-HHHhhhhHHHHHHhhcchhHHHHHHHHHHHH-HHH---HHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 598 ELESLLGTVESEKPKVS-QISTLAAPIVKFLKKDGLDLQKRITALELLS-EEL---NSKLEEKGKEVQKAKAMRAAYLTD 672 (849)
Q Consensus 598 ~l~~~~~~v~~l~~~~~-~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~-~~w---~~~~~~R~~~Le~a~~~~~~f~~d 672 (849)
.++.++.++..+...+. ++...+..| ....+.+...|..+.+.+. ++| .+.+..|+..|++++..+ ++++|
T Consensus 927 Khea~e~dl~a~e~ri~~~l~~~a~eL---~~~~y~~~~~I~~R~~~L~~~~W~~L~~la~~Rk~~Le~~lq~~-~~~~~ 1002 (1010)
T 1g8x_A 927 NLEAFDGECQSLEGQSNSDLLSILAQL---TELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERL-QKIED 1002 (1010)
T ss_dssp SHHHHTTTTTHHHHTHHHHHHHHHHHH---HHTTCTTHHHHHHHHHHHHTTHHHHHHHHTHHHHTTTTTTTSTT-TTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHH
Confidence 88888888888877766 666666653 3344678899999999996 799 788899999999998765 44444
No 46
>2odv_A Plectin 1, HD1; plakin domain, spectrin repeat, cytoskeleton, hemidesmosomes epidermolysis bullosa, structural protein; 2.05A {Homo sapiens} PDB: 2odu_A
Probab=98.07 E-value=0.00057 Score=68.81 Aligned_cols=185 Identities=9% Similarity=0.071 Sum_probs=114.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhccccC--CcccHHHHHHHHHHHhH----------HHHHHHHHHHHHhcccC--CccCh
Q psy4475 458 REQFTTLIMQIVGFITETTARVGEVDG--NSATVQEKIDKYDKENQ----------SEIDMLNDVWKEIKPKA--DQESD 523 (849)
Q Consensus 458 ~~qf~~~~~el~~wl~e~~~~~~~~~~--~~~~ve~~~~k~~~~~q----------~el~~v~~~g~~L~~~~--~~~~~ 523 (849)
...|...+.++..||..+...+.+-.. ....++..+..|..|.. ..|..+...=+.-+..+ .+|..
T Consensus 13 ~~eYe~~as~Ll~WI~~~~~~l~~r~f~~sl~~vq~~l~~f~~fr~~ekppk~~EK~~Le~ll~~lqtklr~~~~~ppeg 92 (235)
T 2odv_A 13 WQEYRELVLLLLQWMRHHTAAFEERRFPSSFEEIEILWSQFLKFKEMELPAKEADKNRSKGIYQSLEGAVQAGQLKVPPG 92 (235)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-CCSSHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Confidence 467888899999999999998865433 23345666666666522 22333222211112111 11221
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhhccc----ccccHHHH
Q psy4475 524 QLIEDQIERINDQWNTLVGDLDTRREKLTELAEQ-------WEQLEKLMSSSERTLKGVETSVEQCDG----VVHSLAVL 592 (849)
Q Consensus 524 ~~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~-------~~~f~~~l~~l~~WL~~~e~~l~~~~~----v~~~~~ql 592 (849)
-.+..|+..|..|.....+|...|...+.. ...|+..+...+.||.+++..|.. +. ++.....
T Consensus 93 ----~~~~di~~~W~~Le~ae~eRe~aL~~el~RlerLe~La~kf~rka~~~e~~L~~~~~~L~~-d~~~l~~~~a~k~- 166 (235)
T 2odv_A 93 ----YHPLDVEKEWGKLHVAILEREKQLRSEFERLEALQRIVTKLQMEAGLAEEQLNQADALLQS-DVRLLAAGKVPQR- 166 (235)
T ss_dssp ----CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHTTTTCCCSC-
T ss_pred ----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hhhhcchhHHHHH-
Confidence 126689999999999999999888877543 367999999999999999998832 11 2211122
Q ss_pred HHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 593 TQNKSELESLLGTVESEKPKVSQISTLAAPIVKFLKKDGLDLQKRITALELLSEELNSKLEEKGK 657 (849)
Q Consensus 593 ~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l~~~w~~~~~~R~~ 657 (849)
++.+..++..+...+..+...+..| -...+.++..+..+...|+++|.........
T Consensus 167 ------~e~ie~dL~~~e~~i~~l~~~a~~L---~~~~y~~a~~i~~r~~~l~~~w~~L~~~~~~ 222 (235)
T 2odv_A 167 ------AGEVERDLDKADSMIRLLFNDVQTL---KDGRHPQGEQMYRRVYRLHKRLVAIRTEYNL 222 (235)
T ss_dssp ------HHHHHHHHHHHHHHHHHHHHHHHHH---HHTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCCcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444444444432 2233788999999999999999544443333
No 47
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=97.75 E-value=3.5e-06 Score=102.73 Aligned_cols=129 Identities=7% Similarity=0.135 Sum_probs=94.1
Q ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHhcCCCCchH------HHHHHHH
Q psy4475 640 ALELLSEEL---NSKLEEKGKEVQKAKA-------MRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQT------LIQFIQQ 703 (849)
Q Consensus 640 ~l~~l~~~w---~~~~~~R~~~Le~a~~-------~~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~~------l~~~lq~ 703 (849)
....+..+| ......|...|..++. ++++|+.+++.+.+||.++|..+.+... +.+ +..+|++
T Consensus 844 ~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~-g~dl~~vqallkKhea 922 (995)
T 2ycu_A 844 TPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNET-GDSITAVQAKLKNLEA 922 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTH-HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccCHHHHHHHHHHHHH
Confidence 467777788 4455566666654432 3468999999999999999999976432 122 2367889
Q ss_pred HHHHHHhhHHHHH-HHHHHHhHhhhcCCChHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 704 LEGELIDMKDKLA-QMTRTGNEISQHTESNEERALIQSTILSF-TEQMQQIEMKLNERKKEVTGCDDAWK 771 (849)
Q Consensus 704 Lq~Ei~~~~~~~~-~l~~~g~~L~~~~~~~~e~~~i~~~l~~L-~~rW~~L~~~~~~r~~~Le~~l~~~~ 771 (849)
|+.+|.++++.+. .|...|+.|.... ..++..|..|.+.| ..+|..|...+.+|+..|++++..++
T Consensus 923 ~e~dl~a~e~ri~~~l~~~a~~L~~~~--y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~q 990 (995)
T 2ycu_A 923 FDGECQSLEGQSNSDLLSILAQLTELN--YNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 990 (995)
T ss_dssp HHHHHHHTTTCSCSSHHHHHHHHTTTH--HHHHHHHHHHHTHHHHHHHHHHHSSSCCCC-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 9999999998875 45678999999999 69999999999999999999997443
No 48
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=97.58 E-value=5.9e-06 Score=100.81 Aligned_cols=211 Identities=10% Similarity=0.132 Sum_probs=131.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--CCcccHHHHHHHHHHHhHHH----HH---HHHHHHHHhc---ccCC
Q psy4475 452 KSLLLLREQFTTLIMQIVGFITETTARVGEVD--GNSATVQEKIDKYDKENQSE----ID---MLNDVWKEIK---PKAD 519 (849)
Q Consensus 452 ~~~l~~~~qf~~~~~el~~wl~e~~~~~~~~~--~~~~~ve~~~~k~~~~~q~e----l~---~v~~~g~~L~---~~~~ 519 (849)
+...+...+|...+.++..||..+...+.... .....++..++.|..+...+ .+ .+......+. ....
T Consensus 754 R~~~l~~~eYe~~a~~Ll~WIr~k~a~l~~r~~~~sl~~IQ~~ir~f~~fr~~ekpp~~~ek~rLeal~~~iqtkLrl~~ 833 (995)
T 2ycu_A 754 RASEQTKSDYLKRANELVQWINDKQASLESRDFGDSIESVQSFMNAHKEYKKTEKPPKGQEVSELEAIYNSLQTKLRLIK 833 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTTTCCCSCHHHHHHHHHHHHHHHHHTTHHHHTHHHHHHHHHHHCSSSCCCCCSSCSST
T ss_pred HHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 33333445788888899999888776543221 11223455555543321111 11 1110000010 0000
Q ss_pred -ccChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHhhhcccccccHHH
Q psy4475 520 -QESDQLIEDQIERINDQWNTLVGDLDTRREKLTELAEQ-------WEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAV 591 (849)
Q Consensus 520 -~~~~~~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~-------~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~q 591 (849)
++-.......+..|+..|..|......|...|...+.. ..+|...+...++||.+++..+.+.++ +.+...
T Consensus 834 ~~~y~p~~gl~~~~L~~~W~~L~~ae~er~~~L~~el~RlerL~~la~kf~~ka~~~e~Wl~eke~~l~s~d~-g~dl~~ 912 (995)
T 2ycu_A 834 REPFVAPAGLTPNEIDSTWSALEKAEQEHAEALRIELKRQKKIAVLLQKYNRILKKLENWATTKSVYLGSNET-GDSITA 912 (995)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTGGGGCCCCCCCHHHHHHHHHHHHTH-HHHHHH
T ss_pred CCCCCcchhccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc-ccCHHH
Confidence 01112234568999999999999999999998766643 246778888999999999999999776 767788
Q ss_pred HHHHHHHHHHHHhhHHhhhhhHH-HHHhhhhHHHHHHhhcchhHHHHHHHHHHH-HHHH---HHHHHHHHHHHHHHHHHH
Q psy4475 592 LTQNKSELESLLGTVESEKPKVS-QISTLAAPIVKFLKKDGLDLQKRITALELL-SEEL---NSKLEEKGKEVQKAKAMR 666 (849)
Q Consensus 592 l~~~~~~l~~~~~~v~~l~~~~~-~i~~~~~~l~~~~~~~~~d~~~i~~~l~~l-~~~w---~~~~~~R~~~Le~a~~~~ 666 (849)
++.+.+.++.++.++......+. .+...+..| ....+.+...|..+.+.+ .++| ...+.+|++.|++++..+
T Consensus 913 vqallkKhea~e~dl~a~e~ri~~~l~~~a~~L---~~~~y~~~~~I~~R~~~l~~~~W~~L~~~a~~Rr~~L~~~~~~~ 989 (995)
T 2ycu_A 913 VQAKLKNLEAFDGECQSLEGQSNSDLLSILAQL---TELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERL 989 (995)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCSCSSHHHHHHHH---TTTHHHHHHHHHHHHTHHHHHHHHHHHSSSCCCC----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 88888899999999988876655 566665543 223356778888888888 5899 567889999999998654
No 49
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=96.15 E-value=0.07 Score=47.52 Aligned_cols=108 Identities=11% Similarity=0.212 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCch-----HHHHHHHHHHHHHHhhHHHHHHHHHHHhHhhh---cC
Q psy4475 658 EVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQ-----TLIQFIQQLEGELIDMKDKLAQMTRTGNEISQ---HT 729 (849)
Q Consensus 658 ~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~-----~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L~~---~~ 729 (849)
.|+..-.++-.|-.-...|-+||+.++.-|.+.-.+.+ .+..+|..|..++..+...+..|....+.|-. .+
T Consensus 6 ~le~id~L~leFAKrAa~fNnW~e~A~EdL~D~~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~~~~~~ 85 (129)
T 1wlx_A 6 QLEAIDQLHLEYAKRAAPFNNWMESAMEDLQDMFIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQRIAESN 85 (129)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHhHHHHhccchhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444455668999999999999999999986533221 13456779999999999999999666555433 12
Q ss_pred C----ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 730 E----SNEERALIQSTILSFTEQMQQIEMKLNERKKEVTGCD 767 (849)
Q Consensus 730 ~----~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~~l 767 (849)
. ++.....|. ...|...|..|...+.+|...|..-+
T Consensus 86 ~~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E~ 125 (129)
T 1wlx_A 86 HIKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEEQ 125 (129)
T ss_dssp CCCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 110121222 77889999999999999999987644
No 50
>1wlx_A Alpha-actinin 4; three-helix bundle, protein binding; NMR {Homo sapiens}
Probab=94.63 E-value=0.66 Score=41.25 Aligned_cols=112 Identities=7% Similarity=0.121 Sum_probs=77.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhhHHhhhhhHHHHHhhhhHHHH
Q psy4475 546 TRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGTVESEKPKVSQISTLAAPIVK 625 (849)
Q Consensus 546 ~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~v~~l~~~~~~i~~~~~~l~~ 625 (849)
.|..++++.. -.|-....++..|+..+++.|..+ ..+++...|+.+...++.+..++.........|..++..|..
T Consensus 5 ~~le~id~L~---leFAKrAa~fNnW~e~A~EdL~D~-~~v~sleEI~~L~~~He~F~~~L~~a~~e~~~i~~i~~el~~ 80 (129)
T 1wlx_A 5 KQLEAIDQLH---LEYAKRAAPFNNWMESAMEDLQDM-FIVHTIEEIEGLISAHDQFKSTLPDADREREAILAIHKEAQR 80 (129)
T ss_dssp HHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHSC-CCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH---HHHHHHhHHHHHHHHhHHHHhccc-hhhccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 4445555544 358888999999999999999832 335678899988888888888888888888888777777666
Q ss_pred HHhhcc-----h-hHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Q psy4475 626 FLKKDG-----L-DLQKRITALELLSEEL---NSKLEEKGKEVQKAK 663 (849)
Q Consensus 626 ~~~~~~-----~-d~~~i~~~l~~l~~~w---~~~~~~R~~~Le~a~ 663 (849)
...+.. + +-..+. .+.+...| ...+..|...|+.-+
T Consensus 81 ~~~~~~~~~~~~npYT~it--~~~l~~~W~~l~~li~~Rd~~Lq~E~ 125 (129)
T 1wlx_A 81 IAESNHIKLSGSNPYTTVT--PQIINSKWEKVQQLVPKRDHALLEEQ 125 (129)
T ss_dssp HHHHSCCCCSSSCSSCCCC--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhCcCCCCCCCCccch--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 543211 0 111111 45556666 778889988887643
No 51
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=88.91 E-value=20 Score=35.75 Aligned_cols=46 Identities=13% Similarity=0.177 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 525 LIEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSER 570 (849)
Q Consensus 525 ~I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~ 570 (849)
.|+.++..++..|+.+...+..-...+...-.....+...+..+..
T Consensus 3 ~~~~~~~~l~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~~~ 48 (284)
T 1c1g_A 3 AIKKKMQMLKLDKENALDRADEAEADKKAAEDRSKQLEDELVSLQK 48 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455555555555555555544444444433333333333333333
No 52
>1c1g_A Tropomyosin; contractIle protein; 7.00A {Sus scrofa} SCOP: h.1.5.1 PDB: 2tma_A 2w49_A 2w4u_A
Probab=84.19 E-value=35 Score=33.86 Aligned_cols=25 Identities=12% Similarity=0.054 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 528 DQIERINDQWNTLVGDLDTRREKLT 552 (849)
Q Consensus 528 ~~l~~L~~~W~~L~~~~~~R~~~Le 552 (849)
..+..+...|..+...+..-...+.
T Consensus 13 ~~~~~~~~~~~~l~~~l~~l~~~~~ 37 (284)
T 1c1g_A 13 LDKENALDRADEAEADKKAAEDRSK 37 (284)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444433333333
No 53
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=61.66 E-value=1.3e+02 Score=29.90 Aligned_cols=83 Identities=8% Similarity=0.056 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccHHHHHHHHHHHHHHHhh
Q psy4475 526 IEDQIERINDQWNTLVGDLDTRREKLTELAEQWEQLEKLMSSSERTLKGVETSVEQCDGVVHSLAVLTQNKSELESLLGT 605 (849)
Q Consensus 526 I~~~l~~L~~~W~~L~~~~~~R~~~Le~a~~~~~~f~~~l~~l~~WL~~~e~~l~~~~~v~~~~~ql~~~~~~l~~~~~~ 605 (849)
+...+..+......+...+......+.+.-.....+...+..+..-+...+..+.+.. +...++.+...|......
T Consensus 30 lp~el~~le~~~~~l~~~~~~~~~~l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~----~~kE~~aL~kEie~~~~~ 105 (256)
T 3na7_A 30 KRKDLDKALNDKEAKNKAILNLEEEKLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK----SERELRSLNIEEDIAKER 105 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS----SSSHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC----CHHHHHHHHHHHHHHHHH
Confidence 4456666666666666666666666666666666777888888888888887776532 234455555555555555
Q ss_pred HHhhhhh
Q psy4475 606 VESEKPK 612 (849)
Q Consensus 606 v~~l~~~ 612 (849)
+..+...
T Consensus 106 i~~lE~e 112 (256)
T 3na7_A 106 SNQANRE 112 (256)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555333
No 54
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=44.84 E-value=76 Score=26.28 Aligned_cols=55 Identities=7% Similarity=0.156 Sum_probs=35.6
Q ss_pred hhHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 632 LDLQKRITALELLSEEL-NSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKI 687 (849)
Q Consensus 632 ~d~~~i~~~l~~l~~~w-~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l 687 (849)
.....+..+...|. .| -+.-..-...++...+....|...+.+-..||.+.=..+
T Consensus 27 ~~~~~L~~~f~~L~-sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vl 82 (94)
T 3fx7_A 27 EEVNSLSNHFHNLE-SWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVL 82 (94)
T ss_dssp HHHHHHHHHHHHCC-SCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhccc-hHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHh
Confidence 44555666666665 67 333444455666677777788888888888887654433
No 55
>3fx7_A Putative uncharacterized protein; double helix, unknown function; 1.65A {Helicobacter pylori} SCOP: a.25.5.1 PDB: 2gts_A
Probab=30.67 E-value=2e+02 Score=23.83 Aligned_cols=56 Identities=16% Similarity=0.382 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcC
Q psy4475 738 IQSTILSFTEQMQQIEMKLNERK----KEVTGCDDAWKHFLSLHAEVMKWVSEKRTFLSE 793 (849)
Q Consensus 738 i~~~l~~L~~rW~~L~~~~~~r~----~~Le~~l~~~~~f~~~~~el~~Wl~~~e~~~~~ 793 (849)
++.....|+.+|..|..+=.+++ ..+++....+++|...+.+-..||..+-.++..
T Consensus 25 Lq~~~~~L~~~f~~L~sWqDqkr~kFee~fe~l~s~l~~f~e~a~e~vp~L~~~i~vle~ 84 (94)
T 3fx7_A 25 LREEVNSLSNHFHNLESWRDARRDKFSEVLDNLKSTFNEFDEAAQEQIAWLKERIRVLEE 84 (94)
T ss_dssp HHHHHHHHHHHHHHCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccchHhhHHHHHHHHHHHHHHHHHHHHHHhhHHHhHHHHHHHHHhHH
Confidence 44555555555555541111122 223444455678888888888888887765543
No 56
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=26.06 E-value=6.8e+02 Score=27.41 Aligned_cols=23 Identities=26% Similarity=0.256 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 657 KEVQKAKAMRAAYLTDVEKIGTWL 680 (849)
Q Consensus 657 ~~Le~a~~~~~~f~~d~~~l~~WL 680 (849)
.+|..+...+ +++.+|..+.-=|
T Consensus 220 sq~q~~~~e~-kal~ei~Qm~mvL 242 (562)
T 3ghg_A 220 SQLQKVPPEW-KALTDMPQMRMEL 242 (562)
T ss_dssp ------------------------
T ss_pred hhccccCHHH-HHhhhhhcEEEEE
Confidence 3344444444 3334555444333
No 57
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=26.04 E-value=2.8e+02 Score=22.88 Aligned_cols=25 Identities=4% Similarity=0.225 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhc
Q psy4475 665 MRAAYLTDVEKIGTWLQDAEAKIQD 689 (849)
Q Consensus 665 ~~~~f~~d~~~l~~WL~e~E~~l~~ 689 (849)
+..+|...+..+..||++.|..+..
T Consensus 13 lv~~fe~rL~~Yr~~IeelE~~L~s 37 (93)
T 3t98_B 13 LVQQFEVQLQQYRQQIEELENHLAT 37 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3468999999999999999998854
No 58
>3na7_A HP0958; flagellar biogenesis, flagellum export, C4 Zn-ribbon, coiled post-transcriptional, gene regulation, chaperone; HET: EPE; 2.20A {Helicobacter pylori}
Probab=25.50 E-value=4.9e+02 Score=25.60 Aligned_cols=62 Identities=11% Similarity=0.055 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHhHh
Q psy4475 659 VQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLEGELIDMKDKLAQMTRTGNEI 725 (849)
Q Consensus 659 Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~~L 725 (849)
+.........+-.++..+..=+...+..+.... .+ +.+.+|..||......+..+.+.-..+
T Consensus 55 l~d~~~~~~~~e~~i~~~~~ri~~~~~~l~~v~-~~----kE~~aL~kEie~~~~~i~~lE~eile~ 116 (256)
T 3na7_A 55 KLALKLQVSKNEQTLQDTNAKIASIQKKMSEIK-SE----RELRSLNIEEDIAKERSNQANREIENL 116 (256)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCS-SS----SHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccC-CH----HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333444666677777777777777765432 22 233445555555554444444444333
No 59
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=23.54 E-value=1.3e+02 Score=21.97 Aligned_cols=34 Identities=18% Similarity=0.249 Sum_probs=28.7
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy4475 731 SNEERALIQSTILSFTEQMQQIEMKLNERKKEVT 764 (849)
Q Consensus 731 ~~~e~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le 764 (849)
++.+.+.++.....|..++..|.....+-+.+|.
T Consensus 17 ~~~d~eaLk~E~~eLk~k~~~L~~~~~el~~~l~ 50 (53)
T 2yy0_A 17 ENPEIELLRLELAEMKEKYEAIVEENKKLKAKLA 50 (53)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5678889999999999999999988888777664
No 60
>3etw_A Adhesin A; antiparallel helix-loop-helix, leucine chain, cell adhesin, cell adhesion; 2.00A {Fusobacterium nucleatum} PDB: 3ety_A 3etx_A 3etz_A 2gl2_A
Probab=23.18 E-value=3.7e+02 Score=23.27 Aligned_cols=103 Identities=10% Similarity=0.062 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchHHHHHHHHHH
Q psy4475 735 RALIQSTILSFTEQMQQIEMKLNERKKEVTG----CDDAWKHFLSLHAEVMKWVSEKRTFLSEPYDSNNLSDLRVKLNSY 810 (849)
Q Consensus 735 ~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~----~l~~~~~f~~~~~el~~Wl~~~e~~~~~~~~~~~l~~~~~~l~~~ 810 (849)
+..|-.++..|...+..|..+=..|-..... +-..+..+......+..=+...........+.+....+..+...+
T Consensus 4 a~~i~~~l~~Leae~q~L~~~E~qry~~eka~AE~A~~~La~~~~l~~~i~er~~~i~~~~~~~~yk~~y~~l~k~Y~~~ 83 (119)
T 3etw_A 4 AASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDA 83 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccchHHHHHHHHHHHHHHH
Confidence 3467888999999999988777766555543 334444555555555555555555554555556667777766666
Q ss_pred HHHHHHhhHhhHhhhhhhHHHHh---hccc
Q psy4475 811 TELTSFVNKHTRKVKDLSKNTQE---AYVS 837 (849)
Q Consensus 811 ~~~~~~~~~~~~~l~~~~~~L~~---~~~~ 837 (849)
...++.-......+.+....+.. |++.
T Consensus 84 ~keLd~~ik~qekiIdnFE~ik~lr~gn~~ 113 (119)
T 3etw_A 84 LKKLEAEMEQQKAVISDFEKIQALRAGNLE 113 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCcc
Confidence 66666666555555555555444 5553
No 61
>3t98_B Nucleoporin NUP58/NUP45; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus} PDB: 2osz_A
Probab=21.88 E-value=3.1e+02 Score=22.59 Aligned_cols=51 Identities=8% Similarity=0.241 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhccccCCCchHHHHHHHHHHHHHHHh
Q psy4475 327 KVIESYKADVNDLDKQLDAISKKLDSVEHGQGVLCPVKANTLKDISNTLEN 377 (849)
Q Consensus 327 ~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~l~kl~~l~~e~~~ 377 (849)
..+..|...+.....|++.++..|.+...++..+......-+..+-..+..
T Consensus 12 ~lv~~fe~rL~~Yr~~IeelE~~L~s~s~~~~~Tpq~L~~~l~~~h~~Fia 62 (93)
T 3t98_B 12 VLVQQFEVQLQQYRQQIEELENHLATQANNSHITPQDLSMAMQKIYQTFVA 62 (93)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCCCHHHHHHHHHHHHHHHHH
Confidence 356778888888888999999988876654323332333334444444443
No 62
>2avr_X Adhesion A; antiparallel helix-loop-helix, leucine chain; HET: FLC; 1.90A {Fusobacterium nucleatum} PDB: 3etw_A 2gkq_A 2bc6_A 3etx_A 3ety_A 2gld_A 3etz_A 2gl2_A
Probab=21.00 E-value=4e+02 Score=22.95 Aligned_cols=99 Identities=10% Similarity=0.061 Sum_probs=64.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHHHhhhcCCCCCCchHHHHHHHHHH
Q psy4475 735 RALIQSTILSFTEQMQQIEMKLNERKKEVTG----CDDAWKHFLSLHAEVMKWVSEKRTFLSEPYDSNNLSDLRVKLNSY 810 (849)
Q Consensus 735 ~~~i~~~l~~L~~rW~~L~~~~~~r~~~Le~----~l~~~~~f~~~~~el~~Wl~~~e~~~~~~~~~~~l~~~~~~l~~~ 810 (849)
+..|-.++..|...|..|..+=..|-.+... +...+.........+..=+...........+.+....+..+..++
T Consensus 4 a~~V~s~l~~LEaeyq~L~~kE~qrynqeka~AE~A~~~L~~~~~m~~~i~ek~~~i~~~~~~~~yK~eY~~L~KkYk~~ 83 (119)
T 2avr_X 4 AASLVGELQALDAEYQNLANQEEARFNEERAQADAARQALAQNEQVYNELSQRAQRLQAEANTRFYKSQYQELASKYEDA 83 (119)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHH
Confidence 3467888899999888887766665444443 444444444445555555555555555566777788888888887
Q ss_pred HHHHHHhhHhhHhhhhhhHHHHh
Q psy4475 811 TELTSFVNKHTRKVKDLSKNTQE 833 (849)
Q Consensus 811 ~~~~~~~~~~~~~l~~~~~~L~~ 833 (849)
...++.-......+.+....+..
T Consensus 84 ~~~Ld~eI~~qe~iI~nFe~Iq~ 106 (119)
T 2avr_X 84 LKKLEAEMEQQKAVISDFEKIQA 106 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 77777766666666666555544
No 63
>2v71_A Nuclear distribution protein NUDE-like 1; developmental protein, nuclear protein, neurogenesis, cytosk LIS1 binding, differentiation; 2.24A {Rattus norvegicus}
Probab=20.33 E-value=5.4e+02 Score=24.17 Aligned_cols=73 Identities=16% Similarity=0.126 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Q psy4475 648 LNSKLEEKGKEVQKAKAMRAAYLTDVEKIGTWLQDAEAKIQDRTLPPQTLIQFIQQLEGELIDMKDKLAQMTRTGN 723 (849)
Q Consensus 648 w~~~~~~R~~~Le~a~~~~~~f~~d~~~l~~WL~e~E~~l~~~~~~~~~l~~~lq~Lq~Ei~~~~~~~~~l~~~g~ 723 (849)
|...+......+..+...+..|+..-.++..=| |..|.........+..++..|..|++..+..+......+.
T Consensus 15 wk~~~~~~~q~~~~le~El~EFqesSrELE~EL---E~eL~~~Ek~~~~L~~~~~~L~~E~e~~k~K~~~~~~e~~ 87 (189)
T 2v71_A 15 WKELSMKYKQSFQEARDELVEFQEGSRELEAEL---EAQLVQAEQRNRDLQADNQRLKYEVEALKEKLEHQYAQSY 87 (189)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 555556666666666666667877777666433 3333222211123445566777777777776666655533
Done!