BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4476
(266 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|345491348|ref|XP_003426578.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Nasonia vitripennis]
Length = 1121
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/104 (83%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVSAYIYHRLLGH
Sbjct: 375 EVGIELKNNSGAPTECTSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRLLGH 433
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 434 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 477
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ S++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 1030 GKLSQ---SEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQS 1086
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 1087 QMDGLLSQDSTYQGDRSGFYQSGQSQ 1112
>gi|345491346|ref|XP_003426577.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Nasonia vitripennis]
Length = 1127
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/104 (83%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVSAYIYHRLLGH
Sbjct: 375 EVGIELKNNSGAPTECTSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRLLGH 433
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 434 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 477
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ S++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 1036 GKLSQ---SEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQS 1092
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 1093 QMDGLLSQDSTYQGDRSGFYQSGQSQ 1118
>gi|345491350|ref|XP_001604124.2| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Nasonia vitripennis]
Length = 1105
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/104 (83%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVSAYIYHRLLGH
Sbjct: 362 EVGIELKNNSGAPTECTSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRLLGH 420
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 421 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 464
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ S++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 1014 GKLSQ---SEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQS 1070
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 1071 QMDGLLSQDSTYQGDRSGFYQSGQSQ 1096
>gi|332029845|gb|EGI69714.1| Putative regulator of nonsense transcripts 1 [Acromyrmex
echinatior]
Length = 838
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 86/104 (82%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQ ALRKFAVDD SVSAYIYHRLLGH
Sbjct: 374 EVGIELKNNSGAPTECISN-FVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 476
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ +++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 747 GKLSQ---TEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQS 803
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 804 QMDGLLSQDSTYQGDRSSFYQSGQSQ 829
>gi|350406738|ref|XP_003487866.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus impatiens]
Length = 1106
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 361 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 420 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 463
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 999 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1058
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1059 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1097
>gi|340721325|ref|XP_003399073.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus terrestris]
Length = 1106
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 361 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 420 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 463
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 999 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1058
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1059 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1097
>gi|340721321|ref|XP_003399071.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus terrestris]
Length = 1119
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 374 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 476
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1012 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1071
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1072 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1110
>gi|66553048|ref|XP_393330.2| PREDICTED: regulator of nonsense transcripts 1 [Apis mellifera]
gi|380015761|ref|XP_003691864.1| PREDICTED: regulator of nonsense transcripts 1-like [Apis florea]
Length = 1119
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 374 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 476
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + +++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1012 NRRGTSLSKNKQGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1071
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1072 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1110
>gi|383847285|ref|XP_003699285.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Megachile rotundata]
Length = 1119
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 374 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 476
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + +++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1012 NRRGTALSKNKQGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1071
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1072 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1110
>gi|383847287|ref|XP_003699286.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Megachile rotundata]
Length = 1106
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 361 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 420 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 463
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + +++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 999 NRRGTALSKNKQGPRMGKLSQTEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1058
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1059 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1097
>gi|350406734|ref|XP_003487865.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Bombus impatiens]
Length = 1119
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 374 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 476
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1012 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1071
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1072 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1110
>gi|340721323|ref|XP_003399072.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Bombus terrestris]
Length = 1108
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 363 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 421
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 422 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 465
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1001 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1060
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1061 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1099
>gi|350406741|ref|XP_003487867.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 3
[Bombus impatiens]
Length = 1108
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQLALRKFAVDD SVS YIYHRLLGH
Sbjct: 363 EVGIELKNNSGAPTECVSN-FVVDFIWKSTSFDRMQLALRKFAVDDTSVSGYIYHRLLGH 421
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 422 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 465
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 54/99 (54%), Gaps = 20/99 (20%)
Query: 188 NHRPSGANKLSQG-HLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----AD 231
N R + +K QG + + + S++ TQPYSQ ++QG GFSLSQ A+
Sbjct: 1001 NRRGTALSKNKQGPRMGKLSQSEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAE 1060
Query: 232 LSQDSLMM----SQLDGMLSQESAYLDHRPPYSNTHYSQ 266
LSQDS + SQ+DG+LSQ+S Y R + + SQ
Sbjct: 1061 LSQDSFAVGEFQSQMDGLLSQDSTYQGDRSGFYQSGQSQ 1099
>gi|307188109|gb|EFN72941.1| Putative regulator of nonsense transcripts 1 [Camponotus
floridanus]
Length = 840
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VG+ELK+++GAPTE F WKSTSFDRMQ ALRKFAVDD SVSAYIYHRLLGH
Sbjct: 374 DVGIELKNNSGAPTECVTN-FVVDFIWKSTSFDRMQSALRKFAVDDTSVSAYIYHRLLGH 432
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 433 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 476
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 19/78 (24%)
Query: 208 SQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----SQLDGMLSQ 248
+++ TQPYSQ ++QG GFSLSQ A+LSQDS + SQ+DG+LSQ
Sbjct: 754 TEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQSQMDGLLSQ 813
Query: 249 ESAYLDHRPPYSNTHYSQ 266
+S Y R + + SQ
Sbjct: 814 DSTYQGDRSGFYQSGQSQ 831
>gi|307207583|gb|EFN85248.1| Regulator of nonsense transcripts 1 [Harpegnathos saltator]
Length = 1108
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 92/104 (88%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE + F WKSTSFDRMQ ALRKFAVDD SVSAYIYHRLLGH
Sbjct: 361 EVGIELKNNSGAPTEC-NSNFVVDFIWKSTSFDRMQSALRKFAVDDSSVSAYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 420 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAVQRPLSLIQG 463
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ +++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 1017 GKLSQ---TEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGEFQS 1073
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 1074 QMDGLLSQDSTYQGDRSGFYQSGQSQ 1099
>gi|322789964|gb|EFZ15058.1| hypothetical protein SINV_12997 [Solenopsis invicta]
Length = 966
Score = 177 bits (448), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/104 (81%), Positives = 90/104 (86%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELK+++GAPTE F WKSTSFDRMQ ALRKFAVDD SVS YIYHRLLGH
Sbjct: 219 EVGIELKNNSGAPTECISN-FVVDFIWKSTSFDRMQSALRKFAVDDSSVSGYIYHRLLGH 277
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG
Sbjct: 278 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 321
Score = 41.6 bits (96), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 48/86 (55%), Gaps = 22/86 (25%)
Query: 200 GHLSQGNNSQEITQPYSQV---MSQGG-------GFSLSQ-----ADLSQDSLMM----S 240
G LSQ +++ TQPYSQ ++QG GFSLSQ A+LSQDS + S
Sbjct: 875 GKLSQ---TEQNTQPYSQPGLPLTQGTTQGMSQPGFSLSQPGLSQAELSQDSFAVGDFQS 931
Query: 241 QLDGMLSQESAYLDHRPPYSNTHYSQ 266
Q+DG+LSQ+S Y R + + SQ
Sbjct: 932 QMDGLLSQDSTYQGDRSGFYQSGQSQ 957
>gi|189234959|ref|XP_973320.2| PREDICTED: similar to nonsense-mediated mrna decay protein 1
(rent1) [Tribolium castaneum]
Length = 1090
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
++G+ELK+ GAPT+ + F WKSTSFDRMQLALRKFAVDD SVSAYIYHRLLGH
Sbjct: 361 DIGIELKNGNGAPTDC-NSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 420 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 463
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 20/79 (25%)
Query: 208 SQEITQPYSQV------MSQGG----GFSLSQ-----ADLSQDSLM---MSQLDGMLSQE 249
SQE TQP+SQ MSQ G GFSLSQ +LSQD M SQ+DG+LSQ+
Sbjct: 1010 SQEQTQPFSQSLQLTQGMSQPGLSQPGFSLSQPGLSQPELSQDPYMAEYQSQMDGLLSQD 1069
Query: 250 SAYLDHRPPY--SNTHYSQ 266
S Y R + N +SQ
Sbjct: 1070 STYQGDRSAFYQPNAQFSQ 1088
>gi|270001378|gb|EEZ97825.1| hypothetical protein TcasGA2_TC000192 [Tribolium castaneum]
Length = 1095
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 83/104 (79%), Positives = 91/104 (87%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
++G+ELK+ GAPT+ + F WKSTSFDRMQLALRKFAVDD SVSAYIYHRLLGH
Sbjct: 366 DIGIELKNGNGAPTDC-NSNFVVDFIWKSTSFDRMQLALRKFAVDDTSVSAYIYHRLLGH 424
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 425 EVEEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 468
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 43/79 (54%), Gaps = 20/79 (25%)
Query: 208 SQEITQPYSQV------MSQGG----GFSLSQ-----ADLSQDSLM---MSQLDGMLSQE 249
SQE TQP+SQ MSQ G GFSLSQ +LSQD M SQ+DG+LSQ+
Sbjct: 1015 SQEQTQPFSQSLQLTQGMSQPGLSQPGFSLSQPGLSQPELSQDPYMAEYQSQMDGLLSQD 1074
Query: 250 SAYLDHRPPY--SNTHYSQ 266
S Y R + N +SQ
Sbjct: 1075 STYQGDRSAFYQPNAQFSQ 1093
>gi|357621770|gb|EHJ73491.1| putative nonsense-mediated mrna decay protein 1 [Danaus plexippus]
Length = 1037
Score = 170 bits (430), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/104 (80%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELKS AGAP E F WKSTSFDRMQLALRKFAVDD SVS YIY RLLGH
Sbjct: 370 DVGLELKSGAGAPLECTSN-FVVDFIWKSTSFDRMQLALRKFAVDDSSVSGYIYRRLLGH 428
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EVLFR HLPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 429 EVEEVLFRVHLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 472
>gi|391341257|ref|XP_003744947.1| PREDICTED: regulator of nonsense transcripts 1-like [Metaseiulus
occidentalis]
Length = 1137
Score = 162 bits (411), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 89/104 (85%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+E+K++AG P+E H F WKSTSFDRMQ ALRKFAVD+ SVSAYIYHRLLGH
Sbjct: 359 EVGIEMKTNAGIPSECTHN-FVVDFVWKSTSFDRMQAALRKFAVDEASVSAYIYHRLLGH 417
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V++++ RC LPK FSAPNLP+LNRSQVYAV+HA+QRPLSLIQG
Sbjct: 418 DVEDIVLRCQLPKQFSAPNLPELNRSQVYAVRHALQRPLSLIQG 461
>gi|242011006|ref|XP_002426248.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
gi|212510311|gb|EEB13510.1| regulator of nonsense transcripts, putative [Pediculus humanus
corporis]
Length = 1108
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/105 (75%), Positives = 85/105 (80%), Gaps = 2/105 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+G+ELKS AGAPTE F WKSTSFDRMQL LRKFAVDD SVS YIYHRLLGH
Sbjct: 382 EIGIELKSGAGAPTECTSN-FVVDFVWKSTSFDRMQLGLRKFAVDDSSVSGYIYHRLLGH 440
Query: 112 NVDEVLF-RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ +EVL R +PKHFSAPNLPDLNRSQVYAVK A+QRPLSLIQG
Sbjct: 441 DYEEVLLSRVQIPKHFSAPNLPDLNRSQVYAVKQALQRPLSLIQG 485
Score = 43.9 bits (102), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 45/72 (62%), Gaps = 10/72 (13%)
Query: 195 NKLSQGH-LSQG-NNSQEITQPYSQ-VMSQGG---GFSLSQADLSQDSLMM----SQLDG 244
NK+++ LSQG SQE TQPYSQ VMSQ G G S LSQ+S ++ SQ+DG
Sbjct: 1024 NKINKKSGLSQGLTISQEATQPYSQGVMSQPGMSQGMSQPGLSLSQESCIVGDFQSQMDG 1083
Query: 245 MLSQESAYLDHR 256
+LSQ+S Y R
Sbjct: 1084 LLSQDSTYQGDR 1095
>gi|321463387|gb|EFX74403.1| hypothetical protein DAPPUDRAFT_57163 [Daphnia pulex]
Length = 1129
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 87/141 (61%), Positives = 102/141 (72%), Gaps = 10/141 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGLFCG 74
GDEL+L + P +G L I LP EVG+ELK+S GAPTE F
Sbjct: 339 GDELRLRYLG-ELHKPWTG-----LGHVIKLPDNYSEEVGIELKNSNGAPTECSTN-FVV 391
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ ALRKFAVD+ SVSAYIYHRLLGH V++++FR HLPKHFSAP+LP+L
Sbjct: 392 DFVWKSTSFDRMQSALRKFAVDESSVSAYIYHRLLGHEVEDIVFRLHLPKHFSAPDLPEL 451
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
NRSQV+AVK A+QRPL+LIQG
Sbjct: 452 NRSQVFAVKQAVQRPLTLIQG 472
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 76/172 (44%), Gaps = 42/172 (24%)
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGMNQRSNGLHHQPGGAG 171
NV + R H P + AP R+Q A A+ PL + M H Q
Sbjct: 951 NVGDPYSRLHDPIGYIAPE-----RAQ--AALSAMPVPLGVFMNMTHVPPRFHGQQQQGM 1003
Query: 172 IGNSANTNRLRNKSNLNHRPSG------ANKLSQGHLSQG--NNSQEI-TQPYSQV---- 218
G+S + R ++ N R SG A+K S +Q N+Q++ TQP+SQ
Sbjct: 1004 HGSSKSNQRPKD----NARGSGPRAGKTASKGSSSLFTQSLSQNTQDVSTQPFSQGGMAL 1059
Query: 219 ---MSQG-----GGFS------LSQADLSQDSLM----MSQLDGMLSQESAY 252
MSQG GF LSQ D SQD+ M SQ+DG+LSQ+S Y
Sbjct: 1060 TQGMSQGMSQTVSGFGALSQSGLSQLDPSQDAYMSSDYQSQMDGLLSQDSTY 1111
>gi|241598902|ref|XP_002404932.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
gi|215502402|gb|EEC11896.1| nonsense-mediated mRNA decay protein, putative [Ixodes scapularis]
Length = 1122
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/104 (72%), Positives = 87/104 (83%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+E+K++ G P+E F WKSTSFDRMQ ALRKFAVD+ SVSAYIYH+LLGH
Sbjct: 370 EVGIEMKTNLGVPSECTSN-FVVDFVWKSTSFDRMQAALRKFAVDECSVSAYIYHKLLGH 428
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ RC LPKHFSAPNLP+LNRSQVYAVKHA+QRPLSLIQG
Sbjct: 429 EVEDVVMRCQLPKHFSAPNLPELNRSQVYAVKHALQRPLSLIQG 472
>gi|427788499|gb|JAA59701.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 1125
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/104 (73%), Positives = 86/104 (82%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+E+K++ G P+E F WKSTSFDRMQ ALRKFAVD+ SVSAYIYHRLLGH
Sbjct: 371 EVGIEMKTNLGVPSECTSN-FVVDFVWKSTSFDRMQAALRKFAVDECSVSAYIYHRLLGH 429
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EV+ RC LPKHFSAP LP+LNRSQVYAVKHA+QRPLSLIQG
Sbjct: 430 EVEEVVMRCPLPKHFSAPQLPELNRSQVYAVKHALQRPLSLIQG 473
>gi|328709620|ref|XP_003244017.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1125
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 83/141 (58%), Positives = 100/141 (70%), Gaps = 12/141 (8%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCG 74
GDEL+L T G P + G+ I +P +VGLELK + G PTE +
Sbjct: 340 GDELRLRLT-------GENPWA-GIGHVIKIPDNYGEDVGLELKINNGVPTEITSN-YVV 390
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ +L++FA D+ SVS+YIYHRLLGH D+++FR H+PKHFSAPNLPDL
Sbjct: 391 DFIWKSTSFDRMQCSLKRFATDESSVSSYIYHRLLGHEFDDLMFRSHMPKHFSAPNLPDL 450
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
NRSQVYAVKHA+QRPLSLIQG
Sbjct: 451 NRSQVYAVKHAVQRPLSLIQG 471
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 70/142 (49%), Gaps = 27/142 (19%)
Query: 149 PLSLIQGMNQRSNGLHHQPGGAGIGNSANTNRLRNKS-NLNHRPSGANKLSQGHLSQGNN 207
P+ ++ MN + +Q N NRL S L +P+ N+ S G +S
Sbjct: 984 PVGMVMNMNSMAPRFFNQQSVQNRQNVRTNNRLPMTSGRLKTKPNQKNQKSNG-ISASPL 1042
Query: 208 SQEITQ----PYSQVMSQG---GGFS-----LSQADLSQDSLMM----SQLDGMLSQESA 251
SQ ITQ PYSQ MSQ GFS LSQ DLSQDS MM SQ+DG+LSQ+S
Sbjct: 1043 SQAITQDVSQPYSQNMSQSMSQPGFSLSQPGLSQPDLSQDSYMMGEFHSQMDGLLSQDST 1102
Query: 252 YLDHR-------PPYSNTHYSQ 266
Y R PP NT YSQ
Sbjct: 1103 YQGDRTVTSFYNPP--NTLYSQ 1122
>gi|291243686|ref|XP_002741733.1| PREDICTED: regulator of nonsense transcripts 1-like, partial
[Saccoglossus kowalevskii]
Length = 974
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 71/104 (68%), Positives = 83/104 (79%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+ELKS+AG PTE H F WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH
Sbjct: 236 EVGIELKSNAGVPTECTHN-FVVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHKLLGH 294
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+EV+ +C+LPK FSAP LP+LN SQVYAVK +QRPLSLIQG
Sbjct: 295 EVEEVVVKCNLPKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQG 338
>gi|193614406|ref|XP_001947281.1| PREDICTED: regulator of nonsense transcripts 1-like [Acyrthosiphon
pisum]
Length = 1118
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/103 (66%), Positives = 82/103 (79%), Gaps = 1/103 (0%)
Query: 53 VGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 112
+GLE+KS+ G PTE + WKSTSFDRMQ +L +FA D+ SVS YIYH+LLGH
Sbjct: 383 IGLEMKSNKGVPTEITSN-YKVDYIWKSTSFDRMQCSLNRFATDESSVSTYIYHKLLGHE 441
Query: 113 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
D+++FR H+PKHFSAPNLPDLNRSQV AVKHA+QRPLSLIQG
Sbjct: 442 FDDLIFRSHMPKHFSAPNLPDLNRSQVKAVKHAVQRPLSLIQG 484
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 62/121 (51%), Gaps = 35/121 (28%)
Query: 166 QPGGAGIGNSANTN-----------RLRNKSNL--NHRP-------SGANKLSQGH---- 201
Q GG IG N N ++N+ N+ NH P + AN+ +Q
Sbjct: 990 QIGGIPIGTMMNINPMAPTRFFNQQSVKNRQNIHTNHLPMTSGRLNTKANQKNQKSNEIR 1049
Query: 202 -LSQGNNSQEITQPYSQVMSQGGGFSLSQ-----ADLSQDSLMM----SQLDGMLSQESA 251
L + SQ+++QP SQ MSQ GFSLSQ DLSQDS +M SQ+DG+LSQ+S
Sbjct: 1050 ALRLTSTSQDVSQPMSQSMSQ-PGFSLSQPGLSEPDLSQDSFIMNEFHSQMDGLLSQDST 1108
Query: 252 Y 252
Y
Sbjct: 1109 Y 1109
>gi|405953739|gb|EKC21342.1| Regulator of nonsense transcripts 1 [Crassostrea gigas]
Length = 1108
Score = 145 bits (366), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV +ELKS+AG P+E H F WKSTSFDRMQ AL+ FAVD+ SV YIYH+LLGH
Sbjct: 373 EVAIELKSNAGVPSECTHN-FVVDFVWKSTSFDRMQAALKTFAVDETSVWGYIYHKLLGH 431
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK FS PNLP+LN SQVYAVK +QRPLSLIQG
Sbjct: 432 EVEDVVIKCQLPKRFSVPNLPELNHSQVYAVKTVLQRPLSLIQG 475
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 41/77 (53%), Gaps = 18/77 (23%)
Query: 203 SQGNNSQEITQPYSQ--------------VMSQGGGFSLSQADLSQDSLMM----SQLDG 244
SQ SQ+++QP+SQ MSQ G LSQ +LSQDS + SQ DG
Sbjct: 1024 SQSQASQDVSQPFSQGPLTQGPMSMSQPFQMSQPGLSGLSQPELSQDSFLADDFKSQADG 1083
Query: 245 MLSQESAYLDHRPPYSN 261
MLSQ+S Y R Y++
Sbjct: 1084 MLSQDSTYQGDRMFYAS 1100
>gi|348523131|ref|XP_003449077.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1101
Score = 143 bits (361), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 353 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEIPHN-FQVDFVWKSTSFDRMQSALKT 411
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V +C LPK F+AP LPDLN SQVYAVK +QRPLSL
Sbjct: 412 FAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQRPLSL 471
Query: 153 IQG 155
IQG
Sbjct: 472 IQG 474
>gi|47217411|emb|CAG00771.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1186
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SSAGAP E H + WKSTSFDRMQ AL+
Sbjct: 365 APLWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEIPHN-YQVDFVWKSTSFDRMQSALKT 423
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V +C LPK F+AP LPDLN SQVYAVK +QRPLSL
Sbjct: 424 FAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTAPGLPDLNHSQVYAVKTVLQRPLSL 483
Query: 153 IQG 155
IQG
Sbjct: 484 IQG 486
>gi|348500490|ref|XP_003437806.1| PREDICTED: regulator of nonsense transcripts 1-like [Oreochromis
niloticus]
Length = 1109
Score = 143 bits (360), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 81/104 (77%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SSAGAP E H +F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 369 EIAIELRSSAGAPVEIPH-IFQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 427
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 428 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 471
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 41/68 (60%), Gaps = 11/68 (16%)
Query: 193 GANKLSQGHLSQGNNSQEITQPYSQVMSQGGGFSLSQADLSQDSLM----MSQLDGMLSQ 248
G+ SQG L+QG S ++QP SQ MSQ G LSQ +LSQDS + SQ+D LSQ
Sbjct: 1037 GSQPFSQGPLTQGYIS--MSQP-SQ-MSQPG---LSQPELSQDSYLGDEFKSQIDVALSQ 1089
Query: 249 ESAYLDHR 256
+S Y R
Sbjct: 1090 DSTYQGER 1097
>gi|47087327|ref|NP_998639.1| regulator of nonsense transcripts 1 [Danio rerio]
gi|28278858|gb|AAH45353.1| Upf1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
gi|240248221|emb|CAX18770.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Danio
rerio]
Length = 1100
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SSAGAP E H F WKSTSFDRMQ AL+
Sbjct: 351 APLWKGIGHVIKVPDNYGDEIAIELRSSAGAPVEVPHN-FQVDFVWKSTSFDRMQSALKT 409
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 410 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 469
Query: 153 IQG 155
IQG
Sbjct: 470 IQG 472
>gi|126030570|pdb|2GJK|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030579|pdb|2GK6|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030580|pdb|2GK6|B Chain B, Structural And Functional Insights Into The Human Upf1
Helicase Core
gi|126030581|pdb|2GK7|A Chain A, Structural And Functional Insights Into The Human Upf1
Helicase Core
Length = 624
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 100 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 158
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 159 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 202
>gi|327200471|pdb|2XZO|A Chain A, Upf1 Helicase - Rna Complex
gi|327200473|pdb|2XZP|A Chain A, Upf1 Helicase
Length = 623
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 99 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 157
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 158 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 201
>gi|157130590|ref|XP_001661931.1| nonsense-mediated mrna decay protein 1 (rent1) [Aedes aegypti]
gi|108871854|gb|EAT36079.1| AAEL011817-PA [Aedes aegypti]
Length = 1121
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/109 (69%), Positives = 82/109 (75%), Gaps = 6/109 (5%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK + AP E F WK TSFDRMQ+ALRKFAVDD SVS YIY RLLGH
Sbjct: 377 DVGLELKHNHQAPIECTSN-FAVDFIWKGTSFDRMQMALRKFAVDDNSVSNYIYSRLLGH 435
Query: 112 N----VDEVLFRCH-LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
D+V FR + LPKHFSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 436 GRADGSDDVTFRINNLPKHFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 484
>gi|149639074|ref|XP_001514946.1| PREDICTED: regulator of nonsense transcripts 1 [Ornithorhynchus
anatinus]
Length = 1113
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 368 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 426
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 427 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 486
Query: 153 IQG 155
IQG
Sbjct: 487 IQG 489
>gi|18375673|ref|NP_002902.2| regulator of nonsense transcripts 1 [Homo sapiens]
gi|2739355|gb|AAB94785.1| pNORF1 [Homo sapiens]
gi|3328175|gb|AAC26788.1| nonsense-mediated mRNA decay trans-acting factor [Homo sapiens]
gi|24981038|gb|AAH39817.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Homo
sapiens]
gi|119605145|gb|EAW84739.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605146|gb|EAW84740.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|119605148|gb|EAW84742.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Homo sapiens]
gi|383420499|gb|AFH33463.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|383420501|gb|AFH33464.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|387540714|gb|AFJ70984.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|410220482|gb|JAA07460.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
gi|410307484|gb|JAA32342.1| UPF1 regulator of nonsense transcripts homolog [Pan troglodytes]
Length = 1118
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 371 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 429
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 430 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 489
Query: 153 IQG 155
IQG
Sbjct: 490 IQG 492
>gi|384939998|gb|AFI33604.1| regulator of nonsense transcripts 1 [Macaca mulatta]
gi|384940000|gb|AFI33605.1| regulator of nonsense transcripts 1 [Macaca mulatta]
Length = 1118
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 371 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 429
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 430 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 489
Query: 153 IQG 155
IQG
Sbjct: 490 IQG 492
>gi|355727790|gb|AES09311.1| UPF1 regulator of nonsense transcripts-like protein [Mustela
putorius furo]
Length = 530
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 299 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 357
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 358 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 417
Query: 153 IQG 155
IQG
Sbjct: 418 IQG 420
>gi|344283632|ref|XP_003413575.1| PREDICTED: regulator of nonsense transcripts 1-like [Loxodonta
africana]
Length = 1117
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 370 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 428
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 429 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 488
Query: 153 IQG 155
IQG
Sbjct: 489 IQG 491
>gi|334326682|ref|XP_003340788.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Monodelphis domestica]
Length = 1122
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 375 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 433
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 434 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 493
Query: 153 IQG 155
IQG
Sbjct: 494 IQG 496
>gi|297476262|ref|XP_002688572.1| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
gi|296486196|tpg|DAA28309.1| TPA: UPF1 regulator of nonsense transcripts homolog [Bos taurus]
Length = 1116
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 369 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 427
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 428 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 487
Query: 153 IQG 155
IQG
Sbjct: 488 IQG 490
>gi|73986070|ref|XP_533868.2| PREDICTED: regulator of nonsense transcripts 1 [Canis lupus
familiaris]
Length = 1119
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 372 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 430
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 431 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 490
Query: 153 IQG 155
IQG
Sbjct: 491 IQG 493
>gi|395847959|ref|XP_003796631.1| PREDICTED: regulator of nonsense transcripts 1 [Otolemur garnettii]
Length = 1118
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 371 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 429
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 430 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 489
Query: 153 IQG 155
IQG
Sbjct: 490 IQG 492
>gi|17380291|sp|Q92900.2|RENT1_HUMAN RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=hUpf1
gi|119605144|gb|EAW84738.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
gi|119605147|gb|EAW84741.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Homo sapiens]
Length = 1129
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 382 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 440
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 441 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 500
Query: 153 IQG 155
IQG
Sbjct: 501 IQG 503
>gi|168274489|dbj|BAG09664.1| regulator of nonsense transcripts 1 [synthetic construct]
Length = 1129
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 382 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 440
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 441 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 500
Query: 153 IQG 155
IQG
Sbjct: 501 IQG 503
>gi|387017334|gb|AFJ50785.1| Regulator of nonsense transcripts 1-like [Crotalus adamanteus]
Length = 1131
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 385 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 443
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 444 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 503
Query: 153 IQG 155
IQG
Sbjct: 504 IQG 506
>gi|417413396|gb|JAA53027.1| Putative dna replication helicase, partial [Desmodus rotundus]
Length = 1052
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 305 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 363
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 364 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 423
Query: 153 IQG 155
IQG
Sbjct: 424 IQG 426
>gi|40788920|dbj|BAA19664.2| KIAA0221 [Homo sapiens]
Length = 1151
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 404 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 462
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 463 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 522
Query: 153 IQG 155
IQG
Sbjct: 523 IQG 525
>gi|281343547|gb|EFB19131.1| hypothetical protein PANDA_000565 [Ailuropoda melanoleuca]
Length = 1122
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 375 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 433
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 434 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 493
Query: 153 IQG 155
IQG
Sbjct: 494 IQG 496
>gi|358412841|ref|XP_001789963.2| PREDICTED: regulator of nonsense transcripts 1 [Bos taurus]
Length = 1063
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 316 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 374
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 375 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 434
Query: 153 IQG 155
IQG
Sbjct: 435 IQG 437
>gi|301618945|ref|XP_002938872.1| PREDICTED: regulator of nonsense transcripts 1 [Xenopus (Silurana)
tropicalis]
Length = 971
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 352 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 410
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 411 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 470
Query: 153 IQG 155
IQG
Sbjct: 471 IQG 473
>gi|344241326|gb|EGV97429.1| Regulator of nonsense transcripts 1 [Cricetulus griseus]
Length = 771
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 43 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 101
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 102 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 145
>gi|297276540|ref|XP_002808229.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Macaca mulatta]
Length = 1096
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 349 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 407
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 408 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 467
Query: 153 IQG 155
IQG
Sbjct: 468 IQG 470
>gi|109504000|ref|XP_001070971.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
gi|392353861|ref|XP_003751615.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|149036014|gb|EDL90680.1| rCG38820 [Rattus norvegicus]
Length = 1113
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 366 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 424
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 425 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 484
Query: 153 IQG 155
IQG
Sbjct: 485 IQG 487
>gi|12836885|gb|AAK08652.1|AF182947_1 nonsense mRNA reducing factor 1 NORF1 [Mus musculus]
Length = 1113
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 366 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 424
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 425 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 484
Query: 153 IQG 155
IQG
Sbjct: 485 IQG 487
>gi|170784811|ref|NP_109605.2| regulator of nonsense transcripts 1 isoform b [Mus musculus]
gi|11993646|gb|AAG42830.1|AF322655_1 regulator of nonsense transcripts 1 [Mus musculus]
gi|30354613|gb|AAH52149.1| UPF1 regulator of nonsense transcripts homolog (yeast) [Mus
musculus]
gi|148696867|gb|EDL28814.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_b [Mus musculus]
Length = 1113
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 366 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 424
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 425 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 484
Query: 153 IQG 155
IQG
Sbjct: 485 IQG 487
>gi|326934529|ref|XP_003213341.1| PREDICTED: regulator of nonsense transcripts 1-like [Meleagris
gallopavo]
Length = 1059
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 314 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 372
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 373 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 432
Query: 153 IQG 155
IQG
Sbjct: 433 IQG 435
>gi|410924491|ref|XP_003975715.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Takifugu rubripes]
Length = 1122
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SSAGAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 378 EIAIELRSSAGAPVEIPHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 436
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 437 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 480
>gi|410950946|ref|XP_003982163.1| PREDICTED: regulator of nonsense transcripts 1 [Felis catus]
Length = 1055
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 308 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 366
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 367 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 426
Query: 153 IQG 155
IQG
Sbjct: 427 IQG 429
>gi|392333562|ref|XP_003752928.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 2
[Rattus norvegicus]
gi|392353859|ref|XP_003751614.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Rattus norvegicus]
Length = 1124
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 377 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 435
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 436 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 495
Query: 153 IQG 155
IQG
Sbjct: 496 IQG 498
>gi|380800401|gb|AFE72076.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
gi|380800403|gb|AFE72077.1| regulator of nonsense transcripts 1, partial [Macaca mulatta]
Length = 1064
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 317 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 375
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 376 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 435
Query: 153 IQG 155
IQG
Sbjct: 436 IQG 438
>gi|170784813|ref|NP_001116301.1| regulator of nonsense transcripts 1 isoform a [Mus musculus]
gi|150387852|sp|Q9EPU0.2|RENT1_MOUSE RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase RENT1; AltName:
Full=Nonsense mRNA reducing factor 1; Short=NORF1;
AltName: Full=Up-frameshift suppressor 1 homolog;
Short=mUpf1
gi|33989570|gb|AAH56442.1| Upf1 protein [Mus musculus]
Length = 1124
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 377 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 435
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 436 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 495
Query: 153 IQG 155
IQG
Sbjct: 496 IQG 498
>gi|148223321|ref|NP_001085862.1| MGC80941 protein [Xenopus laevis]
gi|49116641|gb|AAH73441.1| MGC80941 protein [Xenopus laevis]
Length = 1098
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 350 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 408
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 409 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 468
Query: 153 IQG 155
IQG
Sbjct: 469 IQG 471
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 52/112 (46%), Gaps = 22/112 (19%)
Query: 167 PGGAGIGNSANTNR--LRNKSNLNHRPS----GANKLSQGHLSQGNNSQEI-TQPYSQ-- 217
PG G N R + KS RP G +SQG++ SQ++ +QP+SQ
Sbjct: 974 PGYFGQANGPAPGRGMPKGKSTRGGRPKQRGIGLQGMSQGNMPNSQASQDVVSQPFSQGP 1033
Query: 218 ------VMSQGGGFS---LSQADLSQDSLM----MSQLDGMLSQESAYLDHR 256
MSQ S LSQ +LSQDS + SQ+D LSQ+S Y R
Sbjct: 1034 LTQGYISMSQPSQMSQPGLSQPELSQDSYLGDEFKSQIDVALSQDSTYQGER 1085
>gi|74201543|dbj|BAE28409.1| unnamed protein product [Mus musculus]
Length = 1124
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 377 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 435
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 436 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 495
Query: 153 IQG 155
IQG
Sbjct: 496 IQG 498
>gi|410924489|ref|XP_003975714.1| PREDICTED: regulator of nonsense transcripts 1-like isoform 1
[Takifugu rubripes]
Length = 1111
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/104 (65%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SSAGAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 367 EIAIELRSSAGAPVEIPHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 425
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 426 EVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 469
>gi|194223788|ref|XP_001915294.1| PREDICTED: regulator of nonsense transcripts 1 [Equus caballus]
Length = 1079
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 332 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 390
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 391 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 450
Query: 153 IQG 155
IQG
Sbjct: 451 IQG 453
>gi|1575536|gb|AAC50771.1| regulator of nonsense transcript stability [Homo sapiens]
Length = 1118
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 371 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 429
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 430 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQALPDLNHSQVYAVKTVLQRPLSL 489
Query: 153 IQG 155
IQG
Sbjct: 490 IQG 492
>gi|397493981|ref|XP_003817874.1| PREDICTED: regulator of nonsense transcripts 1 [Pan paniscus]
Length = 1053
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 306 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 364
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 365 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 424
Query: 153 IQG 155
IQG
Sbjct: 425 IQG 427
>gi|351713804|gb|EHB16723.1| Regulator of nonsense transcripts 1 [Heterocephalus glaber]
Length = 1068
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 323 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 381
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 382 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 441
Query: 153 IQG 155
IQG
Sbjct: 442 IQG 444
>gi|251836854|pdb|2WJV|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836855|pdb|2WJV|B Chain B, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2
gi|251836858|pdb|2WJY|A Chain A, Crystal Structure Of The Complex Between Human Nonsense
Mediated Decay Factors Upf1 And Upf2 Orthorhombic Form
Length = 800
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 276 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 334
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 335 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 378
>gi|402904861|ref|XP_003915257.1| PREDICTED: regulator of nonsense transcripts 1, partial [Papio
anubis]
Length = 1041
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 294 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 352
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 353 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 412
Query: 153 IQG 155
IQG
Sbjct: 413 IQG 415
>gi|355703337|gb|EHH29828.1| hypothetical protein EGK_10343, partial [Macaca mulatta]
Length = 1053
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 306 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 364
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 365 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 424
Query: 153 IQG 155
IQG
Sbjct: 425 IQG 427
>gi|148696866|gb|EDL28813.1| UPF1 regulator of nonsense transcripts homolog (yeast), isoform
CRA_a [Mus musculus]
Length = 1131
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 384 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 442
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 443 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 502
Query: 153 IQG 155
IQG
Sbjct: 503 IQG 505
>gi|363743891|ref|XP_418237.3| PREDICTED: regulator of nonsense transcripts 1 [Gallus gallus]
Length = 1096
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 349 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 407
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 408 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 467
Query: 153 IQG 155
IQG
Sbjct: 468 IQG 470
>gi|426387932|ref|XP_004060416.1| PREDICTED: regulator of nonsense transcripts 1 [Gorilla gorilla
gorilla]
Length = 1055
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 308 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 366
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 367 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 426
Query: 153 IQG 155
IQG
Sbjct: 427 IQG 429
>gi|395513182|ref|XP_003760808.1| PREDICTED: regulator of nonsense transcripts 1 [Sarcophilus
harrisii]
Length = 1050
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 303 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 361
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 362 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 421
Query: 153 IQG 155
IQG
Sbjct: 422 IQG 424
>gi|296233329|ref|XP_002761973.1| PREDICTED: regulator of nonsense transcripts 1, partial [Callithrix
jacchus]
Length = 1164
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 436 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 494
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 495 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 538
>gi|410053595|ref|XP_512972.4| PREDICTED: regulator of nonsense transcripts 1 [Pan troglodytes]
Length = 1057
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 390 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 448
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 449 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 492
>gi|354473860|ref|XP_003499150.1| PREDICTED: regulator of nonsense transcripts 1-like [Cricetulus
griseus]
Length = 1061
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 314 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 372
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 373 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 432
Query: 153 IQG 155
IQG
Sbjct: 433 IQG 435
>gi|431922030|gb|ELK19203.1| Regulator of nonsense transcripts 1 [Pteropus alecto]
Length = 1087
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 340 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 398
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 399 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 458
Query: 153 IQG 155
IQG
Sbjct: 459 IQG 461
>gi|47216421|emb|CAG01972.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1123
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 72/123 (58%), Positives = 87/123 (70%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SSAGAP E H F WKSTSFDRMQ AL+
Sbjct: 350 APPWKGIGHVIKVPDNYGDEIAIELRSSAGAPIEIPHN-FQVDFVWKSTSFDRMQSALKT 408
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 409 FAVDETSVSGYIYHKLLGHEVEDVVIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 468
Query: 153 IQG 155
IQG
Sbjct: 469 IQG 471
>gi|441628692|ref|XP_004089387.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
[Nomascus leucogenys]
Length = 1163
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 416 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 474
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 475 FAVDETSVSGYIYHKLLGHEVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 534
Query: 153 IQG 155
IQG
Sbjct: 535 IQG 537
>gi|426230268|ref|XP_004009198.1| PREDICTED: regulator of nonsense transcripts 1 [Ovis aries]
Length = 1341
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 579 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 637
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 638 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 681
>gi|403303596|ref|XP_003942412.1| PREDICTED: regulator of nonsense transcripts 1 [Saimiri boliviensis
boliviensis]
Length = 1257
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 529 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 587
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 588 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 631
>gi|1885356|gb|AAC51140.1| homolog of yeast UPF1 [Homo sapiens]
Length = 1118
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 371 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 429
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 430 FAVDETSVSGYIYHKLLGHEVEDVITKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 489
Query: 153 IQG 155
IQG
Sbjct: 490 IQG 492
>gi|440904008|gb|ELR54581.1| Regulator of nonsense transcripts 1 [Bos grunniens mutus]
Length = 1156
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 425 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 483
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 484 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 527
>gi|449491958|ref|XP_004175605.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Taeniopygia guttata]
Length = 886
Score = 140 bits (352), Expect = 7e-31, Method: Composition-based stats.
Identities = 67/104 (64%), Positives = 79/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 389 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 447
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSLIQG
Sbjct: 448 EVEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSLIQG 491
>gi|432854578|ref|XP_004067970.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts
1-like [Oryzias latipes]
Length = 1093
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/123 (57%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 344 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEIPHN-FQVDFVWKSTSFDRMQSALKT 402
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 403 FAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 462
Query: 153 IQG 155
IQG
Sbjct: 463 IQG 465
>gi|170053152|ref|XP_001862543.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
gi|167873798|gb|EDS37181.1| nonsense-mediated mRNA decay protein 1 [Culex quinquefasciatus]
Length = 1136
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/109 (68%), Positives = 81/109 (74%), Gaps = 6/109 (5%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK + AP E F WK TSFDRMQ+ALRKFAVDD SVS YIY RLLGH
Sbjct: 389 DVGLELKHNHQAPVECSSN-FAVDFIWKGTSFDRMQMALRKFAVDDNSVSNYIYSRLLGH 447
Query: 112 N----VDEVLFRCH-LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
D+V FR + LPKHFSA NLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 448 GRQDGSDDVTFRINNLPKHFSAANLPDLNRSQVYAVKHALQRPLSLIQG 496
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 4/45 (8%)
Query: 211 ITQPYSQVMSQGGGFSLS-QADLSQDSL--MMSQLDGMLSQESAY 252
+TQ SQ MSQ GFSLS Q D SQD L SQ+DG+LSQ+S +
Sbjct: 1064 LTQGMSQNMSQ-PGFSLSQQPDFSQDYLAEYQSQVDGLLSQDSTF 1107
>gi|395333828|gb|EJF66205.1| ATP dependent helicase [Dichomitus squalens LYAD-421 SS1]
Length = 1060
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+GLEL+ S G PTE HG + WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH
Sbjct: 347 EIGLELRRSEGVPTEITHG-YTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGH 405
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ + R +PK FSAP LP+LN SQ+YAVK +Q+PLSLIQG
Sbjct: 406 ELEPQVLRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQG 449
>gi|403412933|emb|CCL99633.1| predicted protein [Fibroporia radiculosa]
Length = 1074
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+GLEL+ S G PTE H + WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH
Sbjct: 360 EIGLELRRSEGVPTEVTHN-YTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGH 418
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ + R H+PK FSAP LP+LN SQ+YAVK +Q+P+SLIQG
Sbjct: 419 ELEPQVLRTHMPKRFSAPGLPELNHSQMYAVKSVLQKPISLIQG 462
>gi|444726614|gb|ELW67138.1| Regulator of nonsense transcripts 1 [Tupaia chinensis]
Length = 1000
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/123 (56%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFDRMQ AL+
Sbjct: 329 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKT 387
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH ++V+ +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 388 FAVDETSVSGYIYHKLLGHEGEDVIIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSL 447
Query: 153 IQG 155
IQG
Sbjct: 448 IQG 450
>gi|392567037|gb|EIW60212.1| ATP dependent helicase, partial [Trametes versicolor FP-101664 SS1]
Length = 1084
Score = 138 bits (347), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 80/104 (76%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+GLEL+ S G PTE HG + WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH
Sbjct: 365 EIGLELRRSEGVPTEVTHG-YTADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGH 423
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ + R +PK FSAP LP+LN SQ++AVK +Q+PLSLIQG
Sbjct: 424 ELEPQVLRTQMPKRFSAPGLPELNHSQMFAVKSVLQKPLSLIQG 467
>gi|410921828|ref|XP_003974385.1| PREDICTED: regulator of nonsense transcripts 1-like [Takifugu
rubripes]
Length = 1099
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL++S GAP E H + WKSTSFDRMQ AL+
Sbjct: 352 APLWKGIGHVIKVPDNYGDEIAIELRTSVGAPVEIPHN-YQVDFVWKSTSFDRMQSALKT 410
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 411 FAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSL 470
Query: 153 IQG 155
IQG
Sbjct: 471 IQG 473
>gi|18202669|sp|Q98TR3.1|RENT1_FUGRU RecName: Full=Putative regulator of nonsense transcripts 1;
AltName: Full=ATP-dependent helicase RENT1
gi|13161880|emb|CAC33025.1| hypothetical protein [Takifugu rubripes]
Length = 1097
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 86/123 (69%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P + E+ +EL++S GAP E H + WKSTSFDRMQ AL+
Sbjct: 353 APLWKGIGHVIKVPDSYGDEIAIELRTSVGAPVEIPHN-YQVDFVWKSTSFDRMQSALKT 411
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAVD+ SVS YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLSL
Sbjct: 412 FAVDETSVSGYIYHKLLGHEVEDVTIKCQLPKRFTANGLPDLNHSQVYAVKTVLQRPLSL 471
Query: 153 IQG 155
IQG
Sbjct: 472 IQG 474
>gi|388580348|gb|EIM20663.1| hypothetical protein WALSEDRAFT_54922 [Wallemia sebi CBS 633.66]
Length = 941
Score = 137 bits (345), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 95/142 (66%), Gaps = 8/142 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT-EVGLELKSSAGAPTESYHGLFC 73
L GDEL+L SY SG G +I V+ E+ LEL+ G P + HG F
Sbjct: 260 LAVGDELRL---SYRGDRDWSG---IGHVVKIPNNVSDEIALELRRQDGVPIDMTHG-FE 312
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WKSTSFDRMQLA++ FAVD+QSVS YIYH+LLGH+++ + R +PK FSAPNLP+
Sbjct: 313 AEFVWKSTSFDRMQLAMKTFAVDEQSVSGYIYHKLLGHDLEPQVVRTQMPKKFSAPNLPE 372
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ+YAVK +Q+PLSLIQG
Sbjct: 373 LNHSQMYAVKSVLQKPLSLIQG 394
>gi|48727634|gb|AAT46119.1| RENT1 [Mus musculus]
Length = 1113
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/123 (55%), Positives = 84/123 (68%), Gaps = 4/123 (3%)
Query: 36 GPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P +G+ I +P E+ +EL+SS GAP E H F WKSTSFD+MQ AL+
Sbjct: 366 APLWKGIGHVIKVPDNYGDEIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDKMQSALKT 424
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FAV++ SVS YIYH+LLGH V++V +C LPK F+A LPDLN SQVYAVK +QRPLS
Sbjct: 425 FAVEETSVSGYIYHKLLGHEVEDVFIKCQLPKRFTAQGLPDLNHSQVYAVKTVLQRPLSF 484
Query: 153 IQG 155
IQG
Sbjct: 485 IQG 487
>gi|347965371|ref|XP_322028.4| AGAP001133-PA [Anopheles gambiae str. PEST]
gi|333470541|gb|EAA01007.4| AGAP001133-PA [Anopheles gambiae str. PEST]
Length = 1161
Score = 137 bits (344), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 82/108 (75%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK + AP E F WK TSF+RMQ ALRKFA+D +SVS YIY RLLG+
Sbjct: 375 DVGLELKHNHQAPIERTSN-FSVDFIWKGTSFERMQQALRKFAMDAKSVSNYIYARLLGN 433
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+EVLFR +LPKHFSAPNLPDLNRSQVYAV+HA+QRPLSLIQG
Sbjct: 434 VRADGAEEVLFRLNLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQG 481
>gi|169852646|ref|XP_001833005.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
gi|116505799|gb|EAU88694.1| ATP dependent helicase [Coprinopsis cinerea okayama7#130]
Length = 1079
Score = 136 bits (343), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 64/104 (61%), Positives = 78/104 (75%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+GLEL+ S G P+E H F WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH
Sbjct: 363 EIGLELRRSDGVPSECTHN-FAADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGH 421
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ R +PK FSAP LP+LN SQ+YAVK +Q+PLSLIQG
Sbjct: 422 EVEAQSLRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQG 465
>gi|312373027|gb|EFR20858.1| hypothetical protein AND_18385 [Anopheles darlingi]
Length = 1161
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/109 (67%), Positives = 82/109 (75%), Gaps = 7/109 (6%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK + AP E F WK TSF+RMQ ALRKFA+D +SVS YIY RLLG
Sbjct: 373 DVGLELKHNHQAPVECTVN-FAVDFIWKGTSFERMQQALRKFAMDAKSVSNYIYSRLLG- 430
Query: 112 NV-----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
NV +EVLFR LPKHFSAPNLPDLNRSQVYAV+HA+QRPLSLIQG
Sbjct: 431 NVRADGNEEVLFRFTLPKHFSAPNLPDLNRSQVYAVRHALQRPLSLIQG 479
>gi|440792662|gb|ELR13871.1| mRNA decay factorlike protein [Acanthamoeba castellanii str. Neff]
Length = 1142
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 76/144 (52%), Positives = 93/144 (64%), Gaps = 11/144 (7%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGL 71
L GDEL+L PG G + ++ +T EV LEL+S+ GAP + HG
Sbjct: 385 LVPGDELRL-------RHPGDGSHAAWNCVGHVVRLTTNEEVALELRSNVGAPIDLSHG- 436
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK+TSFDRMQ A++ FAVDDQS+S Y+YHR LGH V+E FR LPK FSAP L
Sbjct: 437 FSVDFVWKATSFDRMQGAMKTFAVDDQSLSGYLYHRFLGHEVEEQTFRVTLPKRFSAPGL 496
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AVK +Q+PLSLIQG
Sbjct: 497 PELNHSQVAAVKSVLQKPLSLIQG 520
>gi|195553850|ref|XP_002076779.1| GD24645 [Drosophila simulans]
gi|194202769|gb|EDX16345.1| GD24645 [Drosophila simulans]
Length = 1180
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELKSS AP + F WK TSFDRM ALRKFA+D SVS +IY RLLGH
Sbjct: 367 DVGLELKSSTSAPVKCTSN-FTVDFIWKCTSFDRMTRALRKFAIDRNSVSNFIYSRLLGH 425
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 170 AGIGNSANTNRLRNKSNLNHRPSGANKLSQGHLSQGNNSQEITQPYSQVMSQGGGFSLSQ 229
A +G + T++L + GA + +S + P S M+Q GF+LSQ
Sbjct: 1082 ASLGGNKKTHKLGKSRVMGGGTGGAPQTQGTSVSNAAPYSQQPMPLSLQMTQPSGFALSQ 1141
Query: 230 A-DLSQDSLMMSQLDGMLSQESAY 252
+LSQD +SQ+DG+LSQ+ A+
Sbjct: 1142 QPELSQDFGQISQMDGLLSQDVAF 1165
>gi|195356067|ref|XP_002044503.1| GM13241 [Drosophila sechellia]
gi|194131805|gb|EDW53739.1| GM13241 [Drosophila sechellia]
Length = 1180
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 72/108 (66%), Positives = 79/108 (73%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELKSS AP + F WK TSFDRM ALRKFA+D SVS +IY RLLGH
Sbjct: 367 DVGLELKSSTSAPVKCTSN-FTVDFIWKCTSFDRMTRALRKFAIDRNSVSNFIYSRLLGH 425
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRANSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 170 AGIGNSANTNRLRNKSNLNHRPSGANKLSQGHLSQGNNSQEITQPYSQVMSQGGGFSLSQ 229
A +G + T++L + GA + +S + P S M+Q GF+LSQ
Sbjct: 1082 ASLGGNKKTHKLGKSRVMGGGTGGAPQTQGTSVSNAAPYSQQPMPLSLQMTQPSGFALSQ 1141
Query: 230 A-DLSQDSLMMSQLDGMLSQESAY 252
+LSQD +SQ+DG+LSQ+ A+
Sbjct: 1142 QPELSQDFGQISQMDGLLSQDVAF 1165
>gi|195165354|ref|XP_002023504.1| GL20400 [Drosophila persimilis]
gi|194105609|gb|EDW27652.1| GL20400 [Drosophila persimilis]
Length = 879
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
++GLELKSS AP + F WK TSFDRM ALR FA+D QSVS +IY RLLGH
Sbjct: 37 DIGLELKSSTNAPVKCSSN-FSVDFIWKCTSFDRMTRALRTFAMDRQSVSNFIYSRLLGH 95
Query: 112 NV----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
D+VLFR PK FSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 96 GRPDANDDVLFRGAQPKLFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 143
>gi|198468730|ref|XP_002134102.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
gi|198146545|gb|EDY72729.1| GA29178 [Drosophila pseudoobscura pseudoobscura]
Length = 1209
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
++GLELKSS AP + F WK TSFDRM ALR FA+D QSVS +IY RLLGH
Sbjct: 367 DIGLELKSSTNAPVKCSSN-FSVDFIWKCTSFDRMTRALRTFAMDRQSVSNFIYSRLLGH 425
Query: 112 NV----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
D+VLFR PK FSAPNLPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRPDANDDVLFRGAQPKLFSAPNLPDLNRSQVYAVKHALQRPLSLIQG 473
>gi|194889307|ref|XP_001977057.1| GG18821 [Drosophila erecta]
gi|190648706|gb|EDV45984.1| GG18821 [Drosophila erecta]
Length = 1186
Score = 134 bits (336), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK+S+ AP + F WK TSFDRM ALRKFA+D SVS YIY RLLGH
Sbjct: 367 DVGLELKTSSNAPVKCTSN-FTVDFIWKCTSFDRMTRALRKFAIDRNSVSNYIYSRLLGH 425
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRPDSNDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 214 PYSQVMSQGGGFSLSQA-DLSQDSLMMSQLDGMLSQESAY 252
P S M+Q GF+LSQ +LSQD +SQ+DG+LSQ+ A+
Sbjct: 1132 PLSLQMTQPSGFALSQQPELSQDFGQISQMDGLLSQDVAF 1171
>gi|195480688|ref|XP_002101353.1| GE17585 [Drosophila yakuba]
gi|194188877|gb|EDX02461.1| GE17585 [Drosophila yakuba]
Length = 1187
Score = 133 bits (335), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 80/108 (74%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK+S+ AP + F WK TSFDRM ALRKFA+D SVS YIY RLLGH
Sbjct: 367 DVGLELKTSSNAPVKCTSN-FTVDFIWKCTSFDRMTRALRKFAMDRNSVSNYIYSRLLGH 425
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRPDSNDEVLFRGAQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 38.9 bits (89), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 29/40 (72%), Gaps = 1/40 (2%)
Query: 214 PYSQVMSQGGGFSLSQA-DLSQDSLMMSQLDGMLSQESAY 252
P S M+Q GF+LSQ +LSQD +SQ+DG+LSQ+ A+
Sbjct: 1133 PLSLQMTQPSGFALSQQPELSQDFGQISQMDGLLSQDVAF 1172
>gi|409045768|gb|EKM55248.1| hypothetical protein PHACADRAFT_28301 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1067
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/142 (51%), Positives = 92/142 (64%), Gaps = 6/142 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT-EVGLELKSSAGAPTESYHGLFC 73
L GDEL+L T P G G +I V+ E+GLEL+ S G P + H +
Sbjct: 329 LAVGDELRLKYTG-TLHKPWEGD---GHVVKIPNNVSDEIGLELRRSEGVPVDITHN-YT 383
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WKSTSFDRMQLA++ FAVD++SVS YIYH+LLGH ++ R +PK FSAP LP+
Sbjct: 384 VDFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYHKLLGHELEPQTLRTQMPKRFSAPGLPE 443
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ+YAVK +Q+PLSLIQG
Sbjct: 444 LNHSQMYAVKSVLQKPLSLIQG 465
>gi|195131883|ref|XP_002010374.1| GI14718 [Drosophila mojavensis]
gi|193908824|gb|EDW07691.1| GI14718 [Drosophila mojavensis]
Length = 1187
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK S+ AP + F WK TSFDRM ALR FAVD SVS YIY RLLGH
Sbjct: 374 DVGLELKCSSNAPVKCTSN-FSVDFIWKCTSFDRMTRALRNFAVDRNSVSNYIYSRLLGH 432
Query: 112 N----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 433 GRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 480
>gi|18859757|ref|NP_572767.1| Upf1 [Drosophila melanogaster]
gi|27923995|sp|Q9VYS3.2|RENT1_DROME RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|16769416|gb|AAL28927.1| LD30316p [Drosophila melanogaster]
gi|22832121|gb|AAF48115.2| Upf1 [Drosophila melanogaster]
gi|220960128|gb|ACL92600.1| Upf1-PA [synthetic construct]
Length = 1180
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 71/108 (65%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELKSS AP + F WK TSFDRM AL KFA+D SVS +IY RLLGH
Sbjct: 367 DVGLELKSSTNAPVKCTSN-FTVDFIWKCTSFDRMTRALCKFAIDRNSVSNFIYSRLLGH 425
Query: 112 ----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ DEVLFR PK FSAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRADSNDEVLFRGPQPKLFSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 173 GNSANTNRLRNKSNLNHRPSGANKLSQGHLSQGNNSQEITQ---PYSQVMSQGGGFSLSQ 229
G + TN+L KS + +G L+QG S N+ +Q P S M+Q GF+LSQ
Sbjct: 1085 GGNKKTNKL-GKSRVTGGGTGGAPLTQG--SSVCNAAPYSQHPMPLSLQMTQPSGFALSQ 1141
Query: 230 A-DLSQDSLMMSQLDGMLSQESAY 252
+LSQD +SQ+DG+LSQ+ A+
Sbjct: 1142 QPELSQDFGQISQMDGLLSQDVAF 1165
>gi|388852346|emb|CCF53961.1| probable NAM7-nonsense-mediated mRNA decay protein [Ustilago
hordei]
Length = 1091
Score = 130 bits (328), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDELKL A P +G+ I +P EV LELK S G P H
Sbjct: 368 LAVGDELKLRYRGEIA------PPWQGVGHVIKIPNNVSDEVALELKRSDGVPDHCTHNF 421
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK+TSFDRMQ A++ FAVD+QS+S YIYH+LLGH ++ R +PK FSAP L
Sbjct: 422 F-ADFVWKATSFDRMQSAMKTFAVDEQSLSGYIYHKLLGHEIESATLRTTMPKRFSAPGL 480
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AVK +Q+PLSLIQG
Sbjct: 481 PELNHSQVNAVKSVLQKPLSLIQG 504
>gi|71003407|ref|XP_756384.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
gi|46095821|gb|EAK81054.1| hypothetical protein UM00237.1 [Ustilago maydis 521]
Length = 1088
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 87/144 (60%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDELKL A P G+ I +P EV LEL + G P H
Sbjct: 365 LAVGDELKLRYRGEMA------PPWEGVGHVIKIPNHVSDEVALELNRADGVPDHCTHNF 418
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK+TSFDRMQ A++ FAVD+QS+SAYIYH+LLGH +D R +PK FSAP L
Sbjct: 419 F-ADFVWKATSFDRMQNAMKTFAVDEQSLSAYIYHKLLGHEIDNATLRTTMPKRFSAPGL 477
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AVK +Q+PLSLIQG
Sbjct: 478 PELNHSQVNAVKSVLQKPLSLIQG 501
>gi|393245688|gb|EJD53198.1| ATP dependent helicase [Auricularia delicata TFB-10046 SS5]
Length = 1072
Score = 130 bits (328), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+ S G PT+ H F WKSTSFDRMQLA++ FAVD++SVS YIY +LLGH
Sbjct: 356 EIALELRRSDGVPTDCTHN-FVADFVWKSTSFDRMQLAMKTFAVDEKSVSGYIYLKLLGH 414
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ + R +PK FSAP LP+LN SQ+YAVK +Q+PLSLIQG
Sbjct: 415 ELEPQVIRTTMPKRFSAPGLPELNHSQMYAVKSVLQKPLSLIQG 458
>gi|358055738|dbj|GAA98083.1| hypothetical protein E5Q_04765 [Mixia osmundae IAM 14324]
Length = 1047
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 76/145 (52%), Positives = 90/145 (62%), Gaps = 11/145 (7%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDELKL YD + GL I +P EV LEL+ + G P + H
Sbjct: 343 LAVGDELKL---RYDGTL---HKHWDGLGHVIKVPNNISDEVALELRKNDGVPHDCTHN- 395
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCHLPKHFSAPN 130
F WKSTSFDRMQLA++ FAVD+QSVS YIYH+L+GH + R +PK SAPN
Sbjct: 396 FSADFIWKSTSFDRMQLAMKTFAVDEQSVSGYIYHKLMGHEAAVPTVLRTPMPKRVSAPN 455
Query: 131 LPDLNRSQVYAVKHAIQRPLSLIQG 155
LPDLN SQVYAVK +Q+PLSLIQG
Sbjct: 456 LPDLNHSQVYAVKSVLQKPLSLIQG 480
>gi|323507767|emb|CBQ67638.1| probable NAM7-nonsense-mediated mRNA decay protein [Sporisorium
reilianum SRZ2]
Length = 1094
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/144 (50%), Positives = 88/144 (61%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDELKL A P G+ I +P EV LELK + G P H
Sbjct: 364 LAVGDELKLRYRGELA------PPWEGVGHVIKIPNNLSDEVALELKRADGVPDHCTHNF 417
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK+TSFDRMQ A++ FAVD+QS+SAYIYH+LLGH ++ R +PK FSAP L
Sbjct: 418 F-ADFVWKATSFDRMQSAMKTFAVDEQSLSAYIYHKLLGHEIENSTLRTTMPKRFSAPGL 476
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AVK +Q+PLSLIQG
Sbjct: 477 PELNHSQVNAVKSVLQKPLSLIQG 500
>gi|194770581|ref|XP_001967370.1| GF21587 [Drosophila ananassae]
gi|190618050|gb|EDV33574.1| GF21587 [Drosophila ananassae]
Length = 1180
Score = 130 bits (327), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK+S+ AP + F WK TSFDRM ALR FA+D SVS YIY RLLGH
Sbjct: 367 DVGLELKTSSNAPVKCTSN-FSVDFIWKCTSFDRMTRALRNFAMDRNSVSNYIYSRLLGH 425
Query: 112 NV----DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 426 GRPDANDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 473
Score = 41.2 bits (95), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 30/40 (75%), Gaps = 1/40 (2%)
Query: 214 PYSQVMSQGGGFSLSQA-DLSQDSLMMSQLDGMLSQESAY 252
P S M+Q GGF+LSQ +LSQD +SQ+DG+LSQ+ A+
Sbjct: 1126 PLSLQMTQPGGFALSQQPELSQDYGQISQMDGLLSQDVAF 1165
>gi|195396575|ref|XP_002056906.1| GJ16782 [Drosophila virilis]
gi|194146673|gb|EDW62392.1| GJ16782 [Drosophila virilis]
Length = 1219
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 76/108 (70%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK S AP + F WK TSFDRM ALR FA+D SVS YIY RLLGH
Sbjct: 377 DVGLELKCSTNAPVKCTSN-FSVDFIWKCTSFDRMTRALRNFAMDRNSVSNYIYSRLLGH 435
Query: 112 N----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 436 GRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 483
>gi|198435823|ref|XP_002122130.1| PREDICTED: similar to regulator of nonsense transcripts 1 [Ciona
intestinalis]
Length = 1094
Score = 129 bits (325), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 63/104 (60%), Positives = 75/104 (72%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS G P + G F WKSTSFDRMQ A++ FAVD+ SVS YIYHRLLGH
Sbjct: 380 EIAIELRSSVGVPLDK-TGNFHVDFVWKSTSFDRMQSAMKTFAVDEASVSTYIYHRLLGH 438
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+E + +LPK FSAP LP+LN SQVYAVK +QRPL LIQG
Sbjct: 439 EAEEQTLKTNLPKRFSAPGLPELNHSQVYAVKTVLQRPLCLIQG 482
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 40/65 (61%), Gaps = 8/65 (12%)
Query: 197 LSQGHLSQGNNS-QEITQPYSQVMSQGGGFSLSQADLSQDSLMM----SQLDGMLSQESA 251
SQG L+QG + ++QP SQ MSQ G LSQA+LSQDS M SQ+D LSQ+S
Sbjct: 1021 FSQGALTQGYGTGLSMSQPISQGMSQLG---LSQAELSQDSYMAEEFRSQVDAALSQDST 1077
Query: 252 YLDHR 256
Y R
Sbjct: 1078 YQGER 1082
>gi|342320526|gb|EGU12466.1| ATP dependent helicase [Rhodotorula glutinis ATCC 204091]
Length = 1086
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 63/105 (60%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LELK S P + H F WKSTSFDRMQ A+R FAVD+QSVS YIYH+L+GH
Sbjct: 382 EIALELKRSDHVPIDCTHN-FSADFVWKSTSFDRMQQAMRTFAVDEQSVSGYIYHKLMGH 440
Query: 112 NVD-EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ D + R +PK SAPNLPDLN SQ+YAVK +Q+PLSLIQG
Sbjct: 441 DADPPQVLRAQMPKRVSAPNLPDLNHSQIYAVKSVLQKPLSLIQG 485
>gi|168016276|ref|XP_001760675.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688035|gb|EDQ74414.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1610
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/144 (50%), Positives = 90/144 (62%), Gaps = 11/144 (7%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGL 71
L GDEL+L PG G S ++ +T EV LEL+++ G P + H
Sbjct: 632 LVPGDELRL-------RYPGDGTHSGWQSVGHVIKLTAQEEVALELRANQGVPIDVNHN- 683
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WKSTSFDRMQ+A++ FAVD+ SVS YIYHRLLGH V+ R LP+ F AP L
Sbjct: 684 FSVDFVWKSTSFDRMQVAMKTFAVDETSVSGYIYHRLLGHEVEMQTVRNTLPRRFGAPGL 743
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQVYAVK +Q+P+SLIQG
Sbjct: 744 PELNASQVYAVKSVLQKPVSLIQG 767
>gi|357482277|ref|XP_003611424.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
gi|355512759|gb|AES94382.1| Regulator of nonsense transcripts-like protein [Medicago
truncatula]
Length = 1253
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/141 (52%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 363 LVPGDELRLRYSG-DAAHPSW--QSVGHVIKLTAQ-EEVALELRASQGVPVDVNHG-FSV 417
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 418 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPEL 477
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQVYAVK +QRP+SLIQG
Sbjct: 478 NASQVYAVKSVLQRPISLIQG 498
>gi|428177002|gb|EKX45884.1| hypothetical protein GUITHDRAFT_159666 [Guillardia theta CCMP2712]
Length = 1030
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LE+++ AP E+ HG F WKST++DRMQ A+R FAVD+ SVS Y+YHRLLGH
Sbjct: 386 EVALEIRNGNNAPIEATHG-FSVEFVWKSTTYDRMQSAMRTFAVDETSVSGYLYHRLLGH 444
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V+ RC LP FSAP LP+LN SQV+AVK +Q+PLS+IQG
Sbjct: 445 DVEPQPIRCSLPNRFSAPGLPELNHSQVFAVKSVLQQPLSVIQG 488
>gi|384486429|gb|EIE78609.1| hypothetical protein RO3G_03313 [Rhizopus delemar RA 99-880]
Length = 1038
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LE+ P E H F WKSTSFDRMQ A++ FAVD+ SVS YIYHRLLGH
Sbjct: 361 EVALEISRGGKPPIECTHN-FSVDFVWKSTSFDRMQSAMKTFAVDETSVSGYIYHRLLGH 419
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V+ + + +PK FSAPNLP+LN SQVYAVK +Q+PLSLIQG
Sbjct: 420 DVEPQILKTQMPKRFSAPNLPELNHSQVYAVKSVLQKPLSLIQG 463
>gi|356497066|ref|XP_003517385.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1266
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 369 LVPGDELRLRYSG-DAAHPAW--QSVGHVIKLTAQ-EEVALELRASQGVPVDVNHG-FSV 423
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 424 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPEL 483
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +QRP+SLIQG
Sbjct: 484 NASQVFAVKSVLQRPISLIQG 504
>gi|443896129|dbj|GAC73473.1| RNA helicase nonsense mRNA reducing factor [Pseudozyma antarctica
T-34]
Length = 1090
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 70/144 (48%), Positives = 90/144 (62%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDELKL A P G+ I +P E+ LELK S G P H
Sbjct: 370 LAVGDELKLRYRGEMA------PPWEGVGHVIKIPNNVSDEIALELKRSDGVPDHCTHN- 422
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
FC WK+TSFDRMQ A++ FA+D++S+SA IYH+LLG ++D+ + R +PK FSAP L
Sbjct: 423 FCADFVWKATSFDRMQSAMKTFAIDEESLSAPIYHKLLGRDIDQGMLRTTMPKRFSAPGL 482
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AVK +++PLSLIQG
Sbjct: 483 PELNHSQVNAVKSVLKKPLSLIQG 506
>gi|405123238|gb|AFR98003.1| ATP dependent helicase [Cryptococcus neoformans var. grubii H99]
Length = 1092
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+ + G P + HG F WKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH
Sbjct: 372 EICLELRRNDGVPFDCTHG-FSVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGH 430
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R +PK F+APNLP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAVKAVLQKPLSLIQG 474
>gi|357122747|ref|XP_003563076.1| PREDICTED: regulator of nonsense transcripts 1 homolog
[Brachypodium distachyon]
Length = 1267
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L Y T +S G ++ EV LEL++S G P E HG F
Sbjct: 390 LVPGDELRL---RYSGGTSHPAWQSVGHVIKLTA-QEEVALELRASQGVPVELSHG-FSV 444
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LPK F AP LP+L
Sbjct: 445 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPKRFGAPGLPEL 504
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 505 NASQVLAVKSVLQKPVSLIQG 525
>gi|58264876|ref|XP_569594.1| ATP dependent helicase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57225826|gb|AAW42287.1| ATP dependent helicase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1090
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+ + G P + HG F WKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH
Sbjct: 372 EICLELRRNDGVPFDCTHG-FSVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGH 430
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R +PK F+APNLP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAVKAVLQKPLSLIQG 474
>gi|134109641|ref|XP_776499.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259177|gb|EAL21852.1| hypothetical protein CNBC4250 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1089
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+ + G P + HG F WKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH
Sbjct: 372 EICLELRRNDGVPFDCTHG-FSVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGH 430
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R +PK F+APNLP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAVKAVLQKPLSLIQG 474
>gi|340369264|ref|XP_003383168.1| PREDICTED: regulator of nonsense transcripts 1-like [Amphimedon
queenslandica]
Length = 1081
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 65/107 (60%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVGLEL+S+ PT FC WKSTSFDRMQ AL+ AVD+ SVS Y+YHRLLGH
Sbjct: 368 EVGLELRSNVNVPTSCTRD-FCVDFVWKSTSFDRMQNALKLIAVDEGSVSTYLYHRLLGH 426
Query: 112 NVDE---VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V E ++ LPKHFSAPNLP LN SQ+YAVK +Q+PL LIQG
Sbjct: 427 EVLEEPAIIIHKQLPKHFSAPNLPKLNPSQIYAVKTVLQKPLGLIQG 473
>gi|195043318|ref|XP_001991595.1| GH11976 [Drosophila grimshawi]
gi|193901353|gb|EDW00220.1| GH11976 [Drosophila grimshawi]
Length = 1276
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/108 (63%), Positives = 77/108 (71%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLELK + AP + + F WK TSFDRM ALR FA+D SVS YIY RLLGH
Sbjct: 393 DVGLELKCFSNAPLK-FTSNFSVDFIWKCTSFDRMTRALRNFAMDRNSVSNYIYSRLLGH 451
Query: 112 N----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
DEVLFR PK +SAP+LPDLNRSQVYAVKHA+QRPLSLIQG
Sbjct: 452 GRADGSDEVLFRGPQPKLYSAPHLPDLNRSQVYAVKHALQRPLSLIQG 499
>gi|321253648|ref|XP_003192804.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
gi|317459273|gb|ADV21017.1| ATP-dependent RNA helicase of the SFI superfamily Nam7p
[Cryptococcus gattii WM276]
Length = 1097
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 59/104 (56%), Positives = 77/104 (74%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+ + G P + HG F WKSTSFDRMQ A++ FA+D++SVS YIYH+LLGH
Sbjct: 372 EICLELRRNDGVPFDCTHG-FSVDFIWKSTSFDRMQAAMKTFAIDEKSVSGYIYHKLLGH 430
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R +PK F+APNLP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 431 EVEPQVLRTQMPKRFAAPNLPELNHSQMSAVKAVLQKPLSLIQG 474
>gi|195446723|ref|XP_002070897.1| GK25498 [Drosophila willistoni]
gi|194166982|gb|EDW81883.1| GK25498 [Drosophila willistoni]
Length = 1208
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 68/108 (62%), Positives = 78/108 (72%), Gaps = 5/108 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
+VGLE+K+S+ AP + F WK TSFDRM ALR FA+D SVS YIY RLLGH
Sbjct: 372 DVGLEMKTSSNAPVKCTSH-FSVDFIWKCTSFDRMARALRIFAMDRNSVSNYIYSRLLGH 430
Query: 112 N----VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
DEVLFR PK +SAP+LP+LNRSQVYAVKHA+QRPLSLIQG
Sbjct: 431 GRPDGTDEVLFRGPQPKLYSAPHLPELNRSQVYAVKHALQRPLSLIQG 478
Score = 37.0 bits (84), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 9/51 (17%)
Query: 211 ITQPYSQV--------MSQGGGFSLSQA-DLSQDSLMMSQLDGMLSQESAY 252
+T P+SQ M+Q GF+LSQ +LSQD +SQ+DG+LSQ+ ++
Sbjct: 1143 MTSPFSQQPMAAMSLQMTQPSGFALSQQPELSQDFGQISQMDGLLSQDVSF 1193
>gi|356541331|ref|XP_003539131.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Glycine
max]
Length = 1270
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL+++ G P + HG F
Sbjct: 372 LVPGDELRLRYSG-DAAHPAW--QSVGHVIKLTAQ-EEVALELRANQGVPVDVNHG-FSV 426
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 427 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNALPRRFGAPGLPEL 486
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +QRP+SLIQG
Sbjct: 487 NASQVFAVKSVLQRPISLIQG 507
>gi|449511522|ref|XP_004163978.1| PREDICTED: regulator of nonsense transcripts 1 homolog [Cucumis
sativus]
Length = 1268
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P S G ++ EV LEL++S G P + HG F
Sbjct: 369 LVPGDELRLRYSG-DAAHPAW--HSVGHVIKLTAQ-EEVALELRASQGVPVDVVHG-FSV 423
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 424 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPEL 483
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +Q+P+SLIQG
Sbjct: 484 NASQVFAVKSVLQKPISLIQG 504
>gi|449464902|ref|XP_004150168.1| PREDICTED: LOW QUALITY PROTEIN: regulator of nonsense transcripts 1
homolog [Cucumis sativus]
Length = 1246
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P S G ++ EV LEL++S G P + HG F
Sbjct: 369 LVPGDELRLRYSG-DAAHPAW--HSVGHVIKLTAQ-EEVALELRASQGVPVDVVHG-FSV 423
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 424 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPEL 483
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +Q+P+SLIQG
Sbjct: 484 NASQVFAVKSVLQKPISLIQG 504
>gi|359474491|ref|XP_002279304.2| PREDICTED: regulator of nonsense transcripts 1 homolog [Vitis
vinifera]
gi|297742168|emb|CBI33955.3| unnamed protein product [Vitis vinifera]
Length = 1267
Score = 127 bits (318), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 92/141 (65%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 360 LVPGDELRLRYSG-DAAHPAW--QSVGHVIKLTA-QEEVALELRASQGVPVDVNHG-FSV 414
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 415 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEVQMVRNTLPRRFGAPGLPEL 474
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +Q+P+SLIQG
Sbjct: 475 NASQVFAVKSVLQKPISLIQG 495
>gi|115491919|ref|XP_001210587.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
gi|114197447|gb|EAU39147.1| ATP-dependent helicase NAM7 [Aspergillus terreus NIH2624]
Length = 1072
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 301 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKAVPTECT 354
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 355 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 413
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 414 PGLPELNGSQINAVKSVLQRPLSLIQG 440
>gi|255937245|ref|XP_002559649.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584269|emb|CAP92302.1| Pc13g12330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1079
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE+++ Y+ P+ G+ + I +P EV +EL++ PTE
Sbjct: 306 LAVGDEMRI---KYNGEL---RPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 359
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQ A++ FAVD+QSVS YI+HRLLGH V + +PK FS
Sbjct: 360 HN-FMADYVWKSTSFDRMQCAMKTFAVDEQSVSGYIFHRLLGHEVAAAPMKTQIPKKFSV 418
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ+ AVK +QRPLSLIQG
Sbjct: 419 PGLPDLNGSQINAVKSVLQRPLSLIQG 445
>gi|296423838|ref|XP_002841459.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637699|emb|CAZ85650.1| unnamed protein product [Tuber melanosporum]
Length = 1105
Score = 127 bits (318), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 81/125 (64%), Gaps = 7/125 (5%)
Query: 37 PRSRGLRFRIILP---VTEVGLELKSSAG---APTESYHGLFCGPSFWKSTSFDRMQLAL 90
P G+ + I +P EV LEL+ + G PTE H FC WK+TSFDRMQLA+
Sbjct: 335 PHWEGVGYVIKIPNNQSDEVTLELRRNGGDKSVPTECTHA-FCADYVWKATSFDRMQLAM 393
Query: 91 RKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPL 150
+ FAVD+ SVS YIYHRLLGH V + +P+ FS P LP+LN SQV+AVK + +PL
Sbjct: 394 KSFAVDEMSVSGYIYHRLLGHAVAAAPLKTSMPRRFSVPGLPELNVSQVHAVKSVLSKPL 453
Query: 151 SLIQG 155
SLIQG
Sbjct: 454 SLIQG 458
>gi|255575790|ref|XP_002528794.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
gi|223531797|gb|EEF33616.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
Length = 1280
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 382 LVPGDELRLRYSG-DAAHPAW--QSVGHVIKLTAQ-EEVALELRASQGVPVDINHG-FSV 436
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ R LP+ F AP LP+L
Sbjct: 437 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQNVRNTLPRRFGAPGLPEL 496
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV+AVK +QRP+SLIQG
Sbjct: 497 NASQVFAVKSVLQRPISLIQG 517
>gi|425767683|gb|EKV06249.1| Regulator of nonsense transcript, putative [Penicillium digitatum
PHI26]
gi|425780378|gb|EKV18385.1| Regulator of nonsense transcript, putative [Penicillium digitatum
Pd1]
Length = 1079
Score = 126 bits (317), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 89/147 (60%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE+++ Y+ P+ G+ + I +P EV +EL++ PTE
Sbjct: 306 LAVGDEMRI---KYNGEL---RPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 359
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQ A++ FAVD+QSVS YI+HRLLGH V + +PK FS
Sbjct: 360 HN-FMADYVWKSTSFDRMQCAMKTFAVDEQSVSGYIFHRLLGHEVAAAPMKTQIPKKFSV 418
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ+ AVK +QRPLSLIQG
Sbjct: 419 PGLPDLNGSQINAVKSVLQRPLSLIQG 445
>gi|144583657|gb|ABP01542.1| UPF1, partial [Nicotiana attenuata]
Length = 473
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 72/138 (52%), Positives = 90/138 (65%), Gaps = 5/138 (3%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCGPSF 77
GDEL+L S DA+ P +S G ++ EV LEL+ S G P + HGL
Sbjct: 168 GDELRLR-YSGDAAHPAW--QSVGHVVKLTAQ-EEVALELRVSQGVPVDVTHGLSVD-FV 222
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+LN S
Sbjct: 223 WKSTSFDRMQSAMKTFAVDETSVSGYIYHHLLGHEVEMQMVRNALPRRFGAPGLPELNAS 282
Query: 138 QVYAVKHAIQRPLSLIQG 155
QV+AVK +Q+P+SLIQG
Sbjct: 283 QVFAVKSVLQKPISLIQG 300
>gi|169763354|ref|XP_001727577.1| regulator of nonsense transcripts 1 [Aspergillus oryzae RIB40]
gi|238489245|ref|XP_002375860.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|83770605|dbj|BAE60738.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220698248|gb|EED54588.1| regulator of nonsense transcripts, putative [Aspergillus flavus
NRRL3357]
gi|391869636|gb|EIT78831.1| RNA helicase nonsense mRNA reducing factor [Aspergillus oryzae
3.042]
Length = 1072
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 301 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 354
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 355 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 413
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 414 PGLPELNGSQINAVKSVLQRPLSLIQG 440
>gi|259489087|tpe|CBF89067.1| TPA: hypothetical protein similar to possible regulator of nonsense
transcripts (Broad) [Aspergillus nidulans FGSC A4]
Length = 1077
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 306 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 359
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 360 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 418
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 419 PGLPELNGSQINAVKSVLQRPLSLIQG 445
>gi|67516729|ref|XP_658250.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
gi|40745995|gb|EAA65151.1| hypothetical protein AN0646.2 [Aspergillus nidulans FGSC A4]
Length = 1062
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 291 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 344
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 345 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 403
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 404 PGLPELNGSQINAVKSVLQRPLSLIQG 430
>gi|145240145|ref|XP_001392719.1| regulator of nonsense transcripts 1 [Aspergillus niger CBS 513.88]
gi|134077233|emb|CAK45574.1| unnamed protein product [Aspergillus niger]
Length = 1072
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 301 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 354
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 355 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 413
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 414 PGLPELNGSQINAVKSVLQRPLSLIQG 440
>gi|119495335|ref|XP_001264454.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
gi|119412616|gb|EAW22557.1| regulator of nonsense transcripts, putative [Neosartorya fischeri
NRRL 181]
Length = 1079
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 308 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS
Sbjct: 362 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV 420
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRP+SLIQG
Sbjct: 421 PGLPELNGSQINAVKSVLQRPMSLIQG 447
>gi|70995842|ref|XP_752676.1| regulator of nonsense transcripts [Aspergillus fumigatus Af293]
gi|42820708|emb|CAF32021.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus]
gi|66850311|gb|EAL90638.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
Af293]
gi|159131430|gb|EDP56543.1| regulator of nonsense transcripts, putative [Aspergillus fumigatus
A1163]
Length = 1079
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 308 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS
Sbjct: 362 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV 420
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRP+SLIQG
Sbjct: 421 PGLPELNGSQINAVKSVLQRPMSLIQG 447
>gi|19577367|emb|CAD28448.1| possible regulator of nonsense transcripts [Aspergillus fumigatus]
Length = 1060
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 289 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 342
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS
Sbjct: 343 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV 401
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRP+SLIQG
Sbjct: 402 PGLPELNGSQINAVKSVLQRPMSLIQG 428
>gi|224126379|ref|XP_002329539.1| predicted protein [Populus trichocarpa]
gi|222870248|gb|EEF07379.1| predicted protein [Populus trichocarpa]
Length = 1242
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 7/141 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 372 LVPGDELRLRYSG-DAAHPAW--QSVG---HVLTAQEEVALELRASQGVPVDVNHG-FSV 424
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ R LP+ F AP LP+L
Sbjct: 425 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQTVRNALPRRFGAPGLPEL 484
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK+ +Q+P+SLIQG
Sbjct: 485 NASQVLAVKNVLQKPISLIQG 505
>gi|224138824|ref|XP_002326699.1| predicted protein [Populus trichocarpa]
gi|222834021|gb|EEE72498.1| predicted protein [Populus trichocarpa]
Length = 1256
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L S DA+ P +S G ++ EV LEL++S G P + HG F
Sbjct: 368 LVPGDELRLR-YSGDAAHPAW--QSVGHVIKLTAQ-EEVALELRASQGVPVDMNHG-FSV 422
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ R LP+ F AP LP+L
Sbjct: 423 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVENQTVRSALPRRFGAPGLPEL 482
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK+ +Q+P+SLIQG
Sbjct: 483 NASQVLAVKNVLQKPISLIQG 503
>gi|358371937|dbj|GAA88543.1| regulator of nonsense transcripts [Aspergillus kawachii IFO 4308]
Length = 1072
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 301 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 354
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 355 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 413
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 414 PGLPELNGSQINAVKSVLQRPLSLIQG 440
>gi|303275724|ref|XP_003057156.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461508|gb|EEH58801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1100
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/149 (51%), Positives = 92/149 (61%), Gaps = 9/149 (6%)
Query: 11 ELHALDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAG-APTE 66
E+ L GDEL+L +A G R+ + +L T EVGLEL+S G AP E
Sbjct: 352 EVARLMVGDELQLRHVGTNAD----GTRTTWVGVGSVLKFTANEEVGLELRSGGGKAPVE 407
Query: 67 SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHF 126
G F WKSTSFDRMQ A++ FA+D+ SVS YIYH LLGH+VD R LP+
Sbjct: 408 HSTG-FSVDFLWKSTSFDRMQAAMKAFALDETSVSGYIYHLLLGHDVDPQELRTTLPQRM 466
Query: 127 SAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
SAPNLP+LN SQV AV ++RPLSLIQG
Sbjct: 467 SAPNLPELNHSQVNAVASVLRRPLSLIQG 495
>gi|115472199|ref|NP_001059698.1| Os07g0495900 [Oryza sativa Japonica Group]
gi|113611234|dbj|BAF21612.1| Os07g0495900, partial [Oryza sativa Japonica Group]
Length = 1121
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + D+S P +S G ++ EV LEL++S G P + HG F
Sbjct: 243 LVPGDELRLRYSG-DSSHPAW--QSVGHVIKLTAQ-EEVALELRASQGVPVDLNHG-FSV 297
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 298 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 357
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 358 NASQVLAVKSVLQKPISLIQG 378
>gi|50509972|dbj|BAD30435.1| putative type 1 RNA helicase [Oryza sativa Japonica Group]
gi|222637078|gb|EEE67210.1| hypothetical protein OsJ_24327 [Oryza sativa Japonica Group]
Length = 1277
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + D+S P +S G ++ EV LEL++S G P + HG F
Sbjct: 399 LVPGDELRLRYSG-DSSHPAW--QSVGHVIKLTA-QEEVALELRASQGVPVDLNHG-FSV 453
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 454 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 513
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 514 NASQVLAVKSVLQKPISLIQG 534
>gi|218199657|gb|EEC82084.1| hypothetical protein OsI_26082 [Oryza sativa Indica Group]
Length = 1277
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/141 (51%), Positives = 91/141 (64%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + D+S P +S G ++ EV LEL++S G P + HG F
Sbjct: 399 LVPGDELRLRYSG-DSSHPAW--QSVGHVIKLTA-QEEVALELRASQGVPVDLNHG-FSV 453
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 454 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 513
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 514 NASQVLAVKSVLQKPISLIQG 534
>gi|350629790|gb|EHA18163.1| hypothetical protein ASPNIDRAFT_119246 [Aspergillus niger ATCC
1015]
Length = 1071
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 301 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 354
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +PK FS
Sbjct: 355 HN-FTVDYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQMPKKFSV 413
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRPLSLIQG
Sbjct: 414 PGLPELNGSQINAVKSVLQRPLSLIQG 440
>gi|378734810|gb|EHY61269.1| regulator-nonsense transcripts 1 [Exophiala dermatitidis
NIH/UT8656]
Length = 1076
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 322 LAVGDEMRLKYTG------DLRPAWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 375
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FA+D+ SVS YI+HRLLGH V + LPK F+
Sbjct: 376 HN-FTADYVWKATSFDRMQLAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFTV 434
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ+ AVK +Q+PLSLIQG
Sbjct: 435 PGLPDLNSSQINAVKSVLQKPLSLIQG 461
>gi|452987990|gb|EME87745.1| hypothetical protein MYCFIDRAFT_148374 [Pseudocercospora fijiensis
CIRAD86]
Length = 1091
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/147 (46%), Positives = 90/147 (61%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL+S PTE
Sbjct: 334 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRSRGDHKSIPTECT 387
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FAVD+ SVS YI+HRLLGH+V+ + ++P+ FS
Sbjct: 388 HN-FTADYVWKATSFDRMQHAMKTFAVDEMSVSGYIFHRLLGHDVNAAPLKVNMPRKFSV 446
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
PNLPDLN SQ+ AVK +Q+PLSLIQG
Sbjct: 447 PNLPDLNGSQINAVKSVLQKPLSLIQG 473
>gi|121701377|ref|XP_001268953.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
gi|119397096|gb|EAW07527.1| regulator of nonsense transcripts, putative [Aspergillus clavatus
NRRL 1]
Length = 1079
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/147 (47%), Positives = 88/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL++ PTE
Sbjct: 308 LAVGDEMRL---KYSGEL---RPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 361
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + LPK FS
Sbjct: 362 HN-FTADYVWKSTSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKTQLPKKFSV 420
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +QRP+SLIQG
Sbjct: 421 PGLPELNGSQINAVKSVLQRPMSLIQG 447
>gi|328768162|gb|EGF78209.1| hypothetical protein BATDEDRAFT_35814 [Batrachochytrium
dendrobatidis JAM81]
Length = 1119
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 73/104 (70%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV +ELK AP E H F WKSTSFDRMQ A++ FA+D+ SVSAYIYHRLLGH
Sbjct: 402 EVSMELKHDDRAPVECTHN-FTVDFVWKSTSFDRMQNAMKTFALDENSVSAYIYHRLLGH 460
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+VD + + LPK +APNLP+LN SQ AVK + +PLSLIQG
Sbjct: 461 DVDPQVLKVTLPKRINAPNLPELNHSQATAVKSVLSKPLSLIQG 504
>gi|297794533|ref|XP_002865151.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
gi|297310986|gb|EFH41410.1| low-level beta-amylase 1 [Arabidopsis lyrata subsp. lyrata]
Length = 1253
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 88/141 (62%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L Y T +S G ++ EV LEL+++ G P + HG F
Sbjct: 375 LVPGDELRL---RYSGDTAHPAWQSVGHVIKLTAQ-EEVALELRANQGVPVDVNHG-FSV 429
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+ + R LP+ F P LP+L
Sbjct: 430 DFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPEL 489
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 490 NASQVNAVKSVLQKPISLIQG 510
>gi|430813983|emb|CCJ28727.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1045
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 58/104 (55%), Positives = 76/104 (73%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVGLELK S T+ H F WKSTSFDRMQ AL++ A+++ SVS YIYH+LLGH
Sbjct: 365 EVGLELKKSDKIQTDCTHN-FSIDYVWKSTSFDRMQTALKQLAINEASVSGYIYHKLLGH 423
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ ++ + +PK FS+P LP+LN SQVYAV+ +Q+PLSLIQG
Sbjct: 424 DIAPLVLKTQMPKRFSSPGLPELNVSQVYAVRSVLQKPLSLIQG 467
>gi|414886782|tpg|DAA62796.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1273
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L D+S P +S G ++ EV LEL++S G PTE G F
Sbjct: 393 LVPGDELRLRYPG-DSSHPTW--QSVGHVIKLTAQ-EEVALELRASQGVPTELNVG-FSV 447
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 448 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 507
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 508 NASQVLAVKSVLQKPVSLIQG 528
>gi|414886783|tpg|DAA62797.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1272
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L D+S P +S G ++ EV LEL++S G PTE G F
Sbjct: 393 LVPGDELRLRYPG-DSSHPTW--QSVGHVIKLTAQ-EEVALELRASQGVPTELNVG-FSV 447
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 448 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 507
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 508 NASQVLAVKSVLQKPVSLIQG 528
>gi|345567573|gb|EGX50503.1| hypothetical protein AOL_s00075g232 [Arthrobotrys oligospora ATCC
24927]
Length = 1147
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/121 (53%), Positives = 79/121 (65%), Gaps = 7/121 (5%)
Query: 41 GLRFRIILP---VTEVGLELKSSA---GAPTESYHGLFCGPSFWKSTSFDRMQLALRKFA 94
G+ F I +P EV +EL+ A PTE H F WK+TSFDRMQLA++ FA
Sbjct: 352 GVGFVIKIPNNMSDEVTIELRKGANDKSVPTECTHS-FSADYVWKATSFDRMQLAMKNFA 410
Query: 95 VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 154
VD+ SVS YIYHRLLGH+V + LP+ FS P LP+LN SQV AVK +Q+PLSLIQ
Sbjct: 411 VDEMSVSGYIYHRLLGHDVAAAPLKTPLPRRFSVPGLPELNISQVCAVKSVLQKPLSLIQ 470
Query: 155 G 155
G
Sbjct: 471 G 471
>gi|414886785|tpg|DAA62799.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1251
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L D+S P +S G ++ EV LEL++S G PTE G F
Sbjct: 393 LVPGDELRLRYPG-DSSHPTW--QSVGHVIKLTAQ-EEVALELRASQGVPTELNVG-FSV 447
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 448 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 507
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 508 NASQVLAVKSVLQKPVSLIQG 528
>gi|390344703|ref|XP_786803.3| PREDICTED: regulator of nonsense transcripts 1-like
[Strongylocentrotus purpuratus]
Length = 1386
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 90/141 (63%), Gaps = 11/141 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGLFCG 74
GDEL++ T D P SG L + P E+ +ELKS + P + + F
Sbjct: 576 GDELRVRYT--DPREPWSG-----LAHVVKTPDNYSDEICVELKSGSNIPVK-FTTNFAV 627
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ AL+ AVDD +VS+Y+YHRLLGH+V+ ++ +C+LPK FSA LP+L
Sbjct: 628 DFVWKSTSFDRMQNALKTLAVDDTAVSSYLYHRLLGHDVENLVLKCNLPKRFSAQGLPEL 687
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AV+ + RPLSLIQG
Sbjct: 688 NHSQVSAVRTVLTRPLSLIQG 708
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 16/113 (14%)
Query: 157 NQRSNGLHHQPGGAGIGNSANTNRLRNKSNLNHRPSGANKLSQGHLSQGNNSQEITQPYS 216
N SNG H +PGG + + L S N +P + SQG L+QGN S ++QP S
Sbjct: 1269 NAASNG-HGKPGGTSGSQNMSQYNLSLNSTQNSQPDVSQSFSQGVLTQGNMS--MSQPMS 1325
Query: 217 QVMSQGGGFS--------LSQADLSQDSLM-----MSQLDGMLSQESAYLDHR 256
Q GFS LSQ +LSQ+S M SQLD LSQ+S Y R
Sbjct: 1326 QPGLSQPGFSQMGLSQPGLSQPELSQESFMGESEFKSQLDAALSQDSTYQGDR 1378
>gi|242045720|ref|XP_002460731.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
gi|241924108|gb|EER97252.1| hypothetical protein SORBIDRAFT_02g033940 [Sorghum bicolor]
Length = 1269
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 73/141 (51%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L D+S P +S G ++ EV LEL++S G PTE G F
Sbjct: 393 LVPGDELRLRYPG-DSSHPTW--QSVGHVIKLTAQ-EEVALELRASQGVPTELNVG-FSV 447
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH V+ + R LP+ F AP LP+L
Sbjct: 448 DFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGHEVEHQIIRNTLPRRFGAPGLPEL 507
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 508 NASQVLAVKSVLQKPVSLIQG 528
>gi|414590338|tpg|DAA40909.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 889
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL++S G PTE G F WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH
Sbjct: 426 EVALELRASQGVPTELNVG-FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 484
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R LP+ F AP LP+LN SQV AVK +Q+P+SLIQG
Sbjct: 485 EVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQG 528
>gi|414590337|tpg|DAA40908.1| TPA: hypothetical protein ZEAMMB73_069756 [Zea mays]
Length = 726
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL++S G PTE G F WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH
Sbjct: 372 EVALELRASQGVPTELNVG-FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 430
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R LP+ F AP LP+LN SQV AVK +Q+P+SLIQG
Sbjct: 431 EVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQG 474
>gi|9759443|dbj|BAB10240.1| prematurely terminated mRNA decay factor-like protein [Arabidopsis
thaliana]
Length = 1235
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 90/141 (63%), Gaps = 7/141 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA P +S G ++ EV LEL+++ G P + HG F
Sbjct: 374 LVPGDELRLRYSG-DAVHPSW--QSVG---HVLTAQEEVALELRANQGVPIDVNHG-FSV 426
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+ + R LP+ F P LP+L
Sbjct: 427 DFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPEL 486
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 487 NASQVNAVKSVLQKPISLIQG 507
>gi|414886784|tpg|DAA62798.1| TPA: hypothetical protein ZEAMMB73_068361 [Zea mays]
Length = 1205
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 62/104 (59%), Positives = 74/104 (71%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL++S G PTE G F WKSTSFDRMQ A++ FAVD+ SVS YIYH LLGH
Sbjct: 426 EVALELRASQGVPTELNVG-FSVDFVWKSTSFDRMQGAMKTFAVDETSVSGYIYHHLLGH 484
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ + R LP+ F AP LP+LN SQV AVK +Q+P+SLIQG
Sbjct: 485 EVEHQIIRNTLPRRFGAPGLPELNASQVLAVKSVLQKPVSLIQG 528
>gi|30695086|ref|NP_199512.2| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
gi|88984684|sp|Q9FJR0.2|RENT1_ARATH RecName: Full=Regulator of nonsense transcripts 1 homolog; AltName:
Full=ATP-dependent helicase UPF1
gi|332008074|gb|AED95457.1| Regulator of nonsense transcripts 1-like protein [Arabidopsis
thaliana]
Length = 1254
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA P +S G ++ EV LEL+++ G P + HG F
Sbjct: 375 LVPGDELRLRYSG-DAVHPSW--QSVGHVIKLTAQ-EEVALELRANQGVPIDVNHG-FSV 429
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+ + R LP+ F P LP+L
Sbjct: 430 DFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPEL 489
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 490 NASQVNAVKSVLQKPISLIQG 510
>gi|19569060|gb|AAL92018.1| UPF1 [Arabidopsis thaliana]
Length = 1243
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 90/141 (63%), Gaps = 5/141 (3%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDEL+L + DA P +S G ++ EV LEL+++ G P + HG F
Sbjct: 364 LVPGDELRLRYSG-DAVHPSW--QSVGHVIKLTAQ-EEVALELRANQGVPIDVNHG-FSV 418
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLGH V+ + R LP+ F P LP+L
Sbjct: 419 DFVWKSTSFDRMQGAMKNFAVDETSVSGYIYHQLLGHEVEAQMVRNTLPRRFGVPGLPEL 478
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AVK +Q+P+SLIQG
Sbjct: 479 NASQVNAVKSVLQKPISLIQG 499
>gi|242774708|ref|XP_002478495.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
gi|218722114|gb|EED21532.1| nonsense transcript regulator, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1093
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 324 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 377
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FAVD+ SVS Y++HRLLGH V + +PK FS
Sbjct: 378 HN-FTADYVWKATSFDRMQYAMKTFAVDEMSVSGYLFHRLLGHEVAAAPMKTQMPKKFSV 436
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 437 PGLPELNGSQINAVKSVLQKPLSLIQG 463
>gi|154285820|ref|XP_001543705.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
gi|150407346|gb|EDN02887.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus NAm1]
Length = 1088
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 321 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 374
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 375 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 433
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 434 PGLPDLNSSQTNAVKSVLQKPLSLIQG 460
>gi|225558219|gb|EEH06503.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus G186AR]
gi|240277173|gb|EER40682.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H143]
Length = 1071
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 304 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 357
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 358 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 416
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 417 PGLPDLNSSQTNAVKSVLQKPLSLIQG 443
>gi|212532107|ref|XP_002146210.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
gi|210071574|gb|EEA25663.1| nonsense transcript regulator, putative [Talaromyces marneffei ATCC
18224]
Length = 1093
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PTE
Sbjct: 324 LAVGDEMRLKYTGE------LRPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 377
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FAVD+ SVS Y++HRLLGH V + +PK FS
Sbjct: 378 HN-FTADYVWKATSFDRMQYAMKTFAVDEMSVSGYLFHRLLGHEVAAAPMKTQMPKKFSV 436
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 437 PGLPELNGSQINAVKSVLQKPLSLIQG 463
>gi|261201590|ref|XP_002628009.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239590106|gb|EEQ72687.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis SLH14081]
gi|239611816|gb|EEQ88803.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ER-3]
gi|327352930|gb|EGE81787.1| ATP-dependent helicase NAM7 [Ajellomyces dermatitidis ATCC 18188]
Length = 1092
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 325 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 378
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 379 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 437
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 438 PGLPDLNSSQTNAVKSVLQKPLSLIQG 464
>gi|226286939|gb|EEH42452.1| ATP-dependent helicase NAM7 [Paracoccidioides brasiliensis Pb18]
Length = 1087
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 320 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 373
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 374 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 432
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 433 PGLPDLNSSQTNAVKSVLQKPLSLIQG 459
>gi|295657686|ref|XP_002789409.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283831|gb|EEH39397.1| ATP-dependent helicase NAM7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1087
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 320 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 373
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 374 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 432
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 433 PGLPDLNSSQTNAVKSVLQKPLSLIQG 459
>gi|225683333|gb|EEH21617.1| DNA-binding protein SMUBP-2 [Paracoccidioides brasiliensis Pb03]
Length = 1074
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 326 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 379
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 380 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 438
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 439 PGLPDLNSSQTNAVKSVLQKPLSLIQG 465
>gi|324500307|gb|ADY40148.1| Regulator of nonsense transcripts 1 [Ascaris suum]
Length = 1087
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 52 EVGLELKSSA-GAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLG 110
E+G+E++S A PT++ C W STSFDRM ALR D+ VS +IYH+LLG
Sbjct: 354 EIGIEMRSKAENMPTDTRTNFTC-EFVWNSTSFDRMHAALRLLGQDESCVSQFIYHKLLG 412
Query: 111 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
H VD+++F+ LPK FSAP LP+LN SQV AVK +QRPLSLIQG
Sbjct: 413 HEVDDIVFKVQLPKRFSAPGLPELNHSQVQAVKMVLQRPLSLIQG 457
>gi|361128156|gb|EHL00106.1| putative Regulator of nonsense transcripts 1 like protein [Glarea
lozoyensis 74030]
Length = 898
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELK---SSAGAPTESY 68
L GDE++L Y P G+ + I +P EV +EL+ + PTE
Sbjct: 137 LAVGDEMRL---KYKGELR---PVWEGVGYVIKIPNNQSDEVTIELRKVGNDKSVPTECT 190
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V + +PK FS
Sbjct: 191 HN-FSADYVWKATSYDRMQLAMRTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSV 249
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 250 PGLPELNSSQINAVKSVLQKPLSLIQG 276
>gi|315049715|ref|XP_003174232.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
gi|311342199|gb|EFR01402.1| ATP-dependent helicase NAM7 [Arthroderma gypseum CBS 118893]
Length = 1094
Score = 120 bits (300), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 322 LAVGDEMRL---KYAGELR---PKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 375
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 376 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 434
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 435 PGLPGLNSSQINAVKAVLQKPLSLIQG 461
>gi|389640681|ref|XP_003717973.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|351640526|gb|EHA48389.1| regulator-nonsense transcripts 1 [Magnaporthe oryzae 70-15]
gi|440471031|gb|ELQ40068.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae Y34]
gi|440490268|gb|ELQ69843.1| ATP-dependent helicase NAM7 [Magnaporthe oryzae P131]
Length = 1105
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG---APTESY 68
L GDE++L Y P+ G+ + + +P EV LEL+ S PTE
Sbjct: 334 LAVGDEMRL---KYKGEL---RPQWEGVGYVVKIPNNQSDEVTLELRKSGNDKSVPTECT 387
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V R +PK F+A
Sbjct: 388 HN-FSADYVWKATSYDRMQLAMRNFAVDEMSVSGYIFHKLLGHEVAVAPMRTTMPKKFTA 446
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN SQ+ A+K + PLSLIQG
Sbjct: 447 PGLPDLNGSQISAIKAVLSTPLSLIQG 473
>gi|326479319|gb|EGE03329.1| hypothetical protein TEQG_02362 [Trichophyton equinum CBS 127.97]
Length = 1093
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 321 LAVGDEMRL---KYAGEL---RPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 374
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 375 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 433
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 434 PGLPGLNSSQINAVKAVLQKPLSLIQG 460
>gi|326469176|gb|EGD93185.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1064
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 292 LAVGDEMRL---KYAGEL---RPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 345
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 346 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 404
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 405 PGLPGLNSSQINAVKAVLQKPLSLIQG 431
>gi|327293656|ref|XP_003231524.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326466152|gb|EGD91605.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1093
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 321 LAVGDEMRL---KYAGEL---RPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 374
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 375 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 433
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 434 PGLPGLNSSQINAVKAVLQKPLSLIQG 460
>gi|302660352|ref|XP_003021856.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
gi|291185774|gb|EFE41238.1| hypothetical protein TRV_04033 [Trichophyton verrucosum HKI 0517]
Length = 1080
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 308 LAVGDEMRL---KYAGEL---RPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 361
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 362 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 420
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 421 PGLPGLNSSQINAVKAVLQKPLSLIQG 447
>gi|302505946|ref|XP_003014930.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
gi|291178501|gb|EFE34290.1| hypothetical protein ARB_06689 [Arthroderma benhamiae CBS 112371]
Length = 1080
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL+S PTE
Sbjct: 308 LAVGDEMRL---KYAGEL---RPKWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 361
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V + +PK FS
Sbjct: 362 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAAPMKTQMPKQFSV 420
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 421 PGLPGLNSSQINAVKAVLQKPLSLIQG 447
>gi|328852290|gb|EGG01437.1| hypothetical protein MELLADRAFT_79029 [Melampsora larici-populina
98AG31]
Length = 594
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 77/106 (72%), Gaps = 4/106 (3%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL+ + G P E F WKSTSFDRMQLA++ FAVD+QSVS YIYH+L+GH
Sbjct: 392 EVALELRRNDGVPHELTVN-FSVDFVWKSTSFDRMQLAMKTFAVDEQSVSGYIYHKLMGH 450
Query: 112 N--VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ + +VL R +PK SAPNLP+LN SQV AVK +Q+PLSLIQG
Sbjct: 451 DAQIPQVL-RTQMPKRVSAPNLPELNHSQVNAVKSVLQKPLSLIQG 495
>gi|407927468|gb|EKG20360.1| ATPase AAA+ type core [Macrophomina phaseolina MS6]
Length = 1086
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 320 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECT 373
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + LP+ FS
Sbjct: 374 HN-FTADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKTQLPRKFSV 432
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 433 PGLPELNGSQINAVKSVLQKPLSLIQG 459
>gi|380478203|emb|CCF43724.1| ATP-dependent helicase NAM7, partial [Colletotrichum higginsianum]
Length = 555
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/154 (44%), Positives = 91/154 (59%), Gaps = 12/154 (7%)
Query: 11 ELHALDAGDELKLAATSYDASTPGSG---PRSRGLRFRIILP---VTEVGLELKSSAG-- 62
ELH +++GD +KLA + G P G+ + I +P EV LEL+ +
Sbjct: 87 ELHKIESGD-VKLAVGD-EMRLRYKGELRPAWEGVGYVIKIPNNQSDEVTLELRKAGNEK 144
Query: 63 -APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH 121
PTE H F WK+TS+DRMQ A++ FAVDD SVS YI+H+LLGH+V +
Sbjct: 145 QVPTECTHN-FSADYVWKATSYDRMQYAMKTFAVDDMSVSGYIFHKLLGHDVAVAPMKTT 203
Query: 122 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+PK FS P LPDLN SQ+ A+K + PLSLIQG
Sbjct: 204 MPKKFSVPGLPDLNTSQIAAIKAVLSTPLSLIQG 237
>gi|402085799|gb|EJT80697.1| regulator-nonsense transcripts 1 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1097
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG---APTESY 68
L GDE++L Y P+ G+ + + +P EV LEL+ S PTE
Sbjct: 335 LAVGDEMRL---KYKGELR---PQWEGVGYVVKIPNNQSDEVTLELRKSGNDKSVPTECT 388
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA+R FAVD+ SVS YI+H+LLGH V R +PK F+A
Sbjct: 389 HN-FSADYVWKATSYDRMQLAMRNFAVDEMSVSGYIFHKLLGHEVAVAPMRTTMPKKFTA 447
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ A+K + PLSLIQG
Sbjct: 448 PGLPELNGSQISAIKAVLSTPLSLIQG 474
>gi|403178280|ref|XP_003336719.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164088|gb|EFP92300.2| hypothetical protein PGTG_17974 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1131
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 63/106 (59%), Positives = 75/106 (70%), Gaps = 4/106 (3%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL+ + G P E F WKSTSFDRMQ+A++ FAVDDQSVS YIY +LLGH
Sbjct: 398 EVALELRRNDGVPHELTVN-FSVDFVWKSTSFDRMQMAMKTFAVDDQSVSGYIYRKLLGH 456
Query: 112 N--VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V +VL R +PK SAPNLP+LN SQV AVK +Q+PLSL+QG
Sbjct: 457 ETPVPQVL-RTQMPKRVSAPNLPELNHSQVSAVKSVLQKPLSLVQG 501
>gi|330918442|ref|XP_003298225.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
gi|311328707|gb|EFQ93678.1| hypothetical protein PTT_08860 [Pyrenophora teres f. teres 0-1]
Length = 1079
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 322 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECT 375
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS
Sbjct: 376 HN-FSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKIQIPRKFSV 434
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 435 PGLPELNASQINAVKSVLQKPLSLIQG 461
>gi|408397555|gb|EKJ76696.1| hypothetical protein FPSE_03107 [Fusarium pseudograminearum CS3096]
Length = 1083
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 12 LHALDAGDELKLAATSYDASTPGSGPRS--RGLRFRIILP---VTEVGLELKSSAG---A 63
LH +++GD +KLA RS G+ + I +P EV LEL+ +
Sbjct: 320 LHKIESGD-VKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTGNEKLV 378
Query: 64 PTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP 123
PT+ H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH V + + +LP
Sbjct: 379 PTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQLQVMKTNLP 437
Query: 124 KHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
K +SAP LPDLN SQV A+K +Q+PLSLIQG
Sbjct: 438 KKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQG 469
>gi|393911179|gb|EFO25239.2| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1059
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSA-GAPTESYHGLFC 73
GDEL+L + T G S G +I P EVG+E++ A PT++ C
Sbjct: 322 GDELRLK----HSQTAGGEWSSIGCVIKI--PDNHNDEVGIEMRLKAENVPTDTRTNFTC 375
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
W STSFDRMQ AL D+ VS +IYH+L+GH++D+++F+ LPK FS P LP+
Sbjct: 376 -EFVWNSTSFDRMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPE 434
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQV+AVK +QRPLSLIQG
Sbjct: 435 LNHSQVHAVKTVLQRPLSLIQG 456
>gi|342879017|gb|EGU80294.1| hypothetical protein FOXB_09221 [Fusarium oxysporum Fo5176]
Length = 1083
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 12 LHALDAGDELKLAATSYDASTPGSGPRS--RGLRFRIILP---VTEVGLELKSSAG---A 63
LH +++GD +KLA RS G+ + I +P EV LEL+ +
Sbjct: 320 LHKIESGD-VKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTGNEKLV 378
Query: 64 PTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP 123
PT+ H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH V + + +LP
Sbjct: 379 PTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQLQVMKTNLP 437
Query: 124 KHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
K +SAP LPDLN SQV A+K +Q+PLSLIQG
Sbjct: 438 KKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQG 469
>gi|312071929|ref|XP_003138834.1| nonsense mRNA reducing factor 1 NORF1 [Loa loa]
Length = 1141
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSA-GAPTESYHGLFC 73
GDEL+L + T G S G +I P EVG+E++ A PT++ C
Sbjct: 345 GDELRLK----HSQTAGGEWSSIGCVIKI--PDNHNDEVGIEMRLKAENVPTDTRTNFTC 398
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
W STSFDRMQ AL D+ VS +IYH+L+GH++D+++F+ LPK FS P LP+
Sbjct: 399 -EFVWNSTSFDRMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPE 457
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQV+AVK +QRPLSLIQG
Sbjct: 458 LNHSQVHAVKTVLQRPLSLIQG 479
>gi|189207819|ref|XP_001940243.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976336|gb|EDU42962.1| DNA-binding protein SMUBP-2 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1079
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 322 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECT 375
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS
Sbjct: 376 HN-FSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVAAAPMKIQIPRKFSV 434
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 435 PGLPELNASQINAVKSVLQKPLSLIQG 461
>gi|363749513|ref|XP_003644974.1| hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888607|gb|AET38157.1| Hypothetical protein Ecym_2426 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1002
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 85/142 (59%), Gaps = 9/142 (6%)
Query: 17 AGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFC 73
GDE+ L + + + G RG R LP + E LELKS+ +P + F
Sbjct: 305 VGDEMILRYSGLNQT----GWEGRGYILR--LPDSFKDEYTLELKSTKSSPPTNLTTGFT 358
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WK TS+ RMQ ALRKFAVD +S+S Y+Y+++LGH+V ++ F LPK FS PN
Sbjct: 359 AEFVWKGTSYGRMQEALRKFAVDKKSISGYLYYKILGHDVPDIEFEVDLPKEFSIPNFTK 418
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ A+KH +QRPLSLIQG
Sbjct: 419 LNASQKNAIKHVLQRPLSLIQG 440
>gi|298707435|emb|CBJ30064.1| RNA helicase [Ectocarpus siliculosus]
Length = 1101
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/141 (49%), Positives = 83/141 (58%), Gaps = 4/141 (2%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
+ AGDELKL+ G G RI +EV L + PTE G +
Sbjct: 389 MTAGDELKLSLDPVGQRAHGKPWEGLGHVLRIA--DSEVALMMLGGM-VPTEITDG-YQV 444
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WK+ S+DRMQ+AL+ FAVDD SVS YIYHRLLGH V+ + R LP FSAP LP+L
Sbjct: 445 DFVWKAVSYDRMQVALKTFAVDDTSVSGYIYHRLLGHEVEPQVLRVTLPPRFSAPGLPEL 504
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQ AVK +QRPLSLIQG
Sbjct: 505 NHSQFTAVKAVLQRPLSLIQG 525
>gi|46136829|ref|XP_390106.1| RNT1_NEUCR Regulator of nonsense transcripts 1 homolog [Gibberella
zeae PH-1]
Length = 1083
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 93/152 (61%), Gaps = 10/152 (6%)
Query: 12 LHALDAGDELKLAATSYDASTPGSGPRS--RGLRFRIILP---VTEVGLELKSSAG---A 63
LH +++GD +KLA RS G+ + I +P EV LEL+ +
Sbjct: 320 LHKIESGD-VKLAVGDEMRLRYKGELRSPWEGVGYVIKIPNNQSDEVTLELRKTGNEKLV 378
Query: 64 PTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP 123
PT+ H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH V + + +LP
Sbjct: 379 PTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQLQVMKTNLP 437
Query: 124 KHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
K +SAP LPDLN SQV A+K +Q+PLSLIQG
Sbjct: 438 KKWSAPGLPDLNPSQVGAIKAVLQKPLSLIQG 469
>gi|396485880|ref|XP_003842280.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
gi|312218856|emb|CBX98801.1| similar to regulator of nonsense transcripts 1 [Leptosphaeria
maculans JN3]
Length = 1080
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 322 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECT 375
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS
Sbjct: 376 HN-FSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVASAPMKISIPRKFSV 434
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 435 PGLPELNASQINAVKSVLQKPLSLIQG 461
>gi|169615114|ref|XP_001800973.1| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
gi|160702890|gb|EAT82106.2| hypothetical protein SNOG_10712 [Phaeosphaeria nodorum SN15]
Length = 1078
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 323 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTECT 376
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQ A++ FA+D+ SVS YI+HRLLGH V + +P+ FS
Sbjct: 377 HN-FSADYVWKATSFDRMQHAMKTFAIDEMSVSGYIFHRLLGHEVASAPMKIQIPRKFSV 435
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 436 PGLPELNGSQINAVKSVLQKPLSLIQG 462
>gi|346970142|gb|EGY13594.1| ATP-dependent helicase NAM7 [Verticillium dahliae VdLs.17]
Length = 1099
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 16/156 (10%)
Query: 11 ELHALDAGDELKLAATS-----YDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG 62
ELH +++GD +KLA Y P G+ + I +P EV LEL+ +
Sbjct: 321 ELHKIESGD-VKLAVGDEMRLRYKGEL---RPAWEGVGYVIKIPNNHSDEVTLELRKAGN 376
Query: 63 ---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 119
PTE H F WK+TS+DRMQLA++ FAVDD SVS +I H+LLG +V +
Sbjct: 377 EKTVPTECTHN-FSADYVWKATSYDRMQLAMKTFAVDDNSVSGFIVHKLLGRDVAVAPMK 435
Query: 120 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+PK F+AP LPDLN+SQ+ A+K +Q PLSLIQG
Sbjct: 436 TAMPKKFTAPGLPDLNQSQISAIKAVLQTPLSLIQG 471
>gi|302422300|ref|XP_003008980.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
gi|261352126|gb|EEY14554.1| ATP-dependent helicase NAM7 [Verticillium albo-atrum VaMs.102]
Length = 1041
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 92/156 (58%), Gaps = 16/156 (10%)
Query: 11 ELHALDAGDELKLAA-----TSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG 62
ELH +++GD +KLA Y P G+ + I +P EV LEL+ +
Sbjct: 291 ELHKIESGD-VKLAVGDEMRLRYKGEL---RPAWEGVGYVIKIPNNHSDEVTLELRKAGN 346
Query: 63 ---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 119
PTE H F WK+TS+DRMQLA++ FAVDD SVS +I H+LLG +V +
Sbjct: 347 EKTVPTECTHN-FSADYVWKATSYDRMQLAMKTFAVDDNSVSGFIVHKLLGRDVAVAPMK 405
Query: 120 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+PK F+AP LPDLN+SQ+ A+K +Q PLSLIQG
Sbjct: 406 TAMPKKFTAPGLPDLNQSQISAIKAVLQTPLSLIQG 441
>gi|325093995|gb|EGC47305.1| ATP-dependent helicase NAM7 [Ajellomyces capsulatus H88]
Length = 1071
Score = 117 bits (294), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P+ G+ + I +P EV +EL++ PT+
Sbjct: 304 LAVGDEMRLKYTGE------LRPKWDGVGYVIKIPNNQSDEVTIELRTKGDHKSVPTDCT 357
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLG+ V R +PK FS
Sbjct: 358 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGNEVAAGPMRTQMPKKFSV 416
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LPDLN SQ AVK +Q+PLSLIQG
Sbjct: 417 QGLPDLNSSQTNAVKSVLQKPLSLIQG 443
>gi|440632949|gb|ELR02868.1| regulator-nonsense transcripts 1 [Geomyces destructans 20631-21]
Length = 1099
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELK---SSAGAPTESY 68
L GDE++L Y P G+ + + +P EV +EL+ + PTE
Sbjct: 333 LAVGDEMRL---KYKGEL---RPVWEGVGYVVKIPNNQSDEVTIELRKIGNDKSVPTECT 386
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK FS
Sbjct: 387 HN-FSADYVWKATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSV 445
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 446 PGLPELNGSQINAVKSVLQKPLSLIQG 472
>gi|449303317|gb|EMC99325.1| hypothetical protein BAUCODRAFT_399389 [Baudoinia compniacensis
UAMH 10762]
Length = 1096
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 60/122 (49%), Positives = 78/122 (63%), Gaps = 7/122 (5%)
Query: 40 RGLRFRIILP---VTEVGLELKSSA---GAPTESYHGLFCGPSFWKSTSFDRMQLALRKF 93
G+ + I +P EV +EL+S PTE H F WK+TSFDRMQ A++ F
Sbjct: 353 EGVGYVIKIPNNVSDEVTIELRSRGDHKSVPTECTHN-FTADYVWKATSFDRMQHAMKTF 411
Query: 94 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 153
A+D+ SVS YI+HRLLGH V + ++P+ FS PNLPDLN SQ+ AVK + +PLSLI
Sbjct: 412 AIDEMSVSGYIFHRLLGHEVAAAPMKVNMPRKFSVPNLPDLNGSQINAVKSVLTKPLSLI 471
Query: 154 QG 155
QG
Sbjct: 472 QG 473
>gi|296816783|ref|XP_002848728.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
gi|238839181|gb|EEQ28843.1| ATP-dependent helicase NAM7 [Arthroderma otae CBS 113480]
Length = 1088
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L S + G+ + I +P EV +EL+S PTE
Sbjct: 316 LAVGDEMRLKYAGELRS------KWEGVGYVIKIPNNQSDEVTIELRSKGDHKSVPTEIS 369
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS Y++HRLLG+ V + +PK FS
Sbjct: 370 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYLFHRLLGNEVAAAPMKTQMPKQFSV 428
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 429 PGLPGLNSSQINAVKAVLQKPLSLIQG 455
>gi|429860740|gb|ELA35464.1| ATP-dependent helicase nam7 [Colletotrichum gloeosporioides Nara
gc5]
Length = 1088
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 90/156 (57%), Gaps = 16/156 (10%)
Query: 11 ELHALDAGDELKLAATS-----YDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG 62
ELH +++GD +KLA Y P G+ + I +P EV LEL+ +
Sbjct: 320 ELHKIESGD-VKLAVGDEMRLRYKGELR---PAWEGVGYVIKIPNNQSDEVTLELRKAGN 375
Query: 63 ---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 119
PTE H F WK+TS+DRMQ A++ FAVDD SVS YI+H+LLGH+V +
Sbjct: 376 EKTVPTECTHN-FSADYVWKATSYDRMQYAMKTFAVDDMSVSGYIFHKLLGHDVAVAPQK 434
Query: 120 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+PK FS P LPDLN SQ+ A+K + PLSLIQG
Sbjct: 435 TTMPKKFSVPGLPDLNTSQIAAIKAVLSTPLSLIQG 470
>gi|156065921|ref|XP_001598882.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980]
gi|154691830|gb|EDN91568.1| hypothetical protein SS1G_00971 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 972
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELK---SSAGAPTESY 68
L GDE++L Y P G+ + + +P EV +EL+ + PTE
Sbjct: 334 LAVGDEMRL---KYKGELR---PVWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECT 387
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + +PK FS
Sbjct: 388 HN-FSADYVWKATSYDRMQFAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSV 446
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 447 PGLPELNSSQINAVKSVLQKPLSLIQG 473
>gi|310800151|gb|EFQ35044.1| RNA helicase [Glomerella graminicola M1.001]
Length = 1086
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 90/156 (57%), Gaps = 16/156 (10%)
Query: 11 ELHALDAGDELKLAATS-----YDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG 62
ELH +++GD +KLA Y P G+ + I +P EV LEL+ +
Sbjct: 320 ELHKIESGD-VKLAVGDEMRLRYKGELR---PTWEGVGYVIKIPNNQSDEVTLELRKAGN 375
Query: 63 ---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR 119
PTE H F WK+TS+DRMQ A++ FAVDD SVS YI+H+LLGH+V +
Sbjct: 376 EKTVPTECTHN-FSADYVWKATSYDRMQYAMKTFAVDDMSVSGYIFHKLLGHDVAVAPMK 434
Query: 120 CHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+PK +S P LPDLN SQ+ A+K + PLSLIQG
Sbjct: 435 TTMPKKYSVPGLPDLNTSQIAAIKAVLSTPLSLIQG 470
>gi|443913950|gb|ELU36263.1| ATP dependent helicase [Rhizoctonia solani AG-1 IA]
Length = 517
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 55/105 (52%), Positives = 75/105 (71%), Gaps = 2/105 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHR-LLG 110
E+GLEL+ + G P + HG F WKSTSFDRMQLA++ FA+D++SVS YI +
Sbjct: 251 EIGLELRRNDGVPVDCTHG-FSVDFVWKSTSFDRMQLAMKTFAIDEKSVSGYIVSKPSYC 309
Query: 111 HNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
H+++ + R +PK FSAP LP+LN SQ+YAVK +Q+P+SLIQG
Sbjct: 310 HDLEPTILRTQMPKRFSAPGLPELNHSQMYAVKSVLQKPISLIQG 354
>gi|402594446|gb|EJW88372.1| hypothetical protein WUBG_00717 [Wuchereria bancrofti]
Length = 1089
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSA-GAPTESYHGLFC 73
GDEL+L + T G S G +I P EVG+E++ A PT++ C
Sbjct: 322 GDELRLK----HSQTAGGEWSSVGCVIKI--PDNHNDEVGIEMRLKAENVPTDTRTNFTC 375
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
W STSF+RMQ AL D+ VS +IYH+L+GH++D+++F+ LPK FS P LP+
Sbjct: 376 -EFVWNSTSFERMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPE 434
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQV+AVK +QRPLSLIQG
Sbjct: 435 LNHSQVHAVKTVLQRPLSLIQG 456
>gi|154305574|ref|XP_001553189.1| hypothetical protein BC1G_08556 [Botryotinia fuckeliana B05.10]
gi|347828532|emb|CCD44229.1| similar to regulator of nonsense transcripts 1 [Botryotinia
fuckeliana]
Length = 1100
Score = 116 bits (291), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELK---SSAGAPTESY 68
L GDE++L Y P G+ + + +P EV +EL+ + PTE
Sbjct: 334 LAVGDEMRL---KYKGELR---PVWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECT 387
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + +PK FS
Sbjct: 388 HN-FSADYVWKATSYDRMQFAMKTFAVDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFSV 446
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 447 PGLPELNSSQISAVKSVLQKPLSLIQG 473
>gi|333038075|gb|AEF13567.1| hypothetical protein PICST_73544 [Scheffersomyces stipitis CBS
6054]
Length = 1021
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 85/143 (59%), Gaps = 11/143 (7%)
Query: 17 AGDELKLAAT-SYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGLF 72
GDE+ L T ++D G G F + LP E LEL ++ AP F
Sbjct: 321 VGDEIILRYTGAHDEKWEGRG-------FIVRLPNAHQEEFTLELNAAKTAPPTHLSTDF 373
Query: 73 CGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 132
WK TS++RMQ A++ FAVD++SVS YIYH+LLGH V+ V F LP+ FS PNL
Sbjct: 374 TAEFVWKGTSYERMQDAMKLFAVDEESVSGYIYHKLLGHEVEPVEFDVKLPQRFSHPNLT 433
Query: 133 DLNRSQVYAVKHAIQRPLSLIQG 155
+LN SQ+ AV+ +QRPLSLIQG
Sbjct: 434 ELNVSQINAVRSVLQRPLSLIQG 456
>gi|170593003|ref|XP_001901254.1| Regulator of nonsense transcripts 1 homolog [Brugia malayi]
gi|158591321|gb|EDP29934.1| Regulator of nonsense transcripts 1 homolog, putative [Brugia
malayi]
Length = 1112
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 65/142 (45%), Positives = 87/142 (61%), Gaps = 11/142 (7%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSA-GAPTESYHGLFC 73
GDEL+L + T G S G +I P EVG+E++ A PT++ C
Sbjct: 322 GDELRLK----HSQTAGGEWSSVGCVIKI--PDNHNDEVGIEMRLKAENVPTDTRTNFTC 375
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
W STSF+RMQ AL D+ VS +IYH+L+GH++D+++F+ LPK FS P LP+
Sbjct: 376 -EFVWNSTSFERMQAALSLLGQDEDCVSQFIYHKLMGHDIDDIIFKVSLPKRFSVPGLPE 434
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQV+AVK +QRPLSLIQG
Sbjct: 435 LNHSQVHAVKTVLQRPLSLIQG 456
>gi|303320095|ref|XP_003070047.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240109733|gb|EER27902.1| nonsense transcript regulator, putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320031876|gb|EFW13833.1| ATP-dependent helicase NAM7 [Coccidioides posadasii str. Silveira]
gi|392865836|gb|EAS31677.2| ATP-dependent helicase NAM7 [Coccidioides immitis RS]
Length = 1101
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL++ PTE
Sbjct: 331 LAVGDEMRL---KYSGEL---RPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 384
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQ A++ FAVD+ SVS YI+HRLLG+ V + LPK F+A
Sbjct: 385 HN-FTADYVWKSTSFDRMQSAMKTFAVDELSVSNYIFHRLLGNEVAAGPMKTQLPKKFTA 443
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 444 PGLPGLNPSQINAVKAVLQKPLSLIQG 470
>gi|119183909|ref|XP_001242931.1| hypothetical protein CIMG_06827 [Coccidioides immitis RS]
Length = 1089
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/147 (46%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P+ G+ + I +P EV +EL++ PTE
Sbjct: 319 LAVGDEMRL---KYSGEL---RPKWEGVGYVIKIPNNQSDEVTIELRAKGDHKSVPTECT 372
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WKSTSFDRMQ A++ FAVD+ SVS YI+HRLLG+ V + LPK F+A
Sbjct: 373 HN-FTADYVWKSTSFDRMQSAMKTFAVDELSVSNYIFHRLLGNEVAAGPMKTQLPKKFTA 431
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP LN SQ+ AVK +Q+PLSLIQG
Sbjct: 432 PGLPGLNPSQINAVKAVLQKPLSLIQG 458
>gi|449685514|ref|XP_002161143.2| PREDICTED: regulator of nonsense transcripts 1-like [Hydra
magnipapillata]
Length = 1153
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 64/105 (60%), Positives = 73/105 (69%), Gaps = 2/105 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVGLEL+ + G PTE H F WKSTSFDRMQ A++ FAVD+ SVS YIYH+LLG
Sbjct: 407 EVGLELRKNDGVPTECTHH-FSVDFIWKSTSFDRMQYAMKTFAVDETSVSGYIYHKLLGX 465
Query: 112 NVDEVLFRCHLP-KHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ F L K FSAP LP+LN SQVYAVK +QRPLSLIQG
Sbjct: 466 XXLSISFFFFLIYKRFSAPGLPELNHSQVYAVKTVLQRPLSLIQG 510
>gi|313231475|emb|CBY08589.1| unnamed protein product [Oikopleura dioica]
Length = 1109
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 58/105 (55%), Positives = 73/105 (69%), Gaps = 1/105 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL+S+ A F WKSTSFDRMQ AL+ FAVD+ SVS Y+YH+LLG+
Sbjct: 374 EIALELRSNVPAGILETSRGFSLEFIWKSTSFDRMQAALKAFAVDESSVSGYLYHKLLGN 433
Query: 112 NVDEVLFRC-HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+++E + LP+ FSAP LPDLN SQ YAVK +Q+PLSLIQG
Sbjct: 434 DIEEQNLKIPSLPRRFSAPGLPDLNHSQAYAVKTVLQKPLSLIQG 478
>gi|406864055|gb|EKD17101.1| RNA helicase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1098
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 62/147 (42%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELK---SSAGAPTESY 68
L GDE++L Y P G+ + + +P EV +EL+ + PTE
Sbjct: 334 LAVGDEMRL---KYKGEL---RPFWEGVGYVVKIPNNQSDEVTIELRKVGNDKSVPTECT 387
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQ A++ FA+D+ SVS YI+H+LLGH V + +PK F+
Sbjct: 388 HN-FSADYVWKATSYDRMQFAMKTFAIDEMSVSGYIFHKLLGHEVAAAPMKIQMPKKFTV 446
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 447 PGLPELNNSQINAVKSVLQKPLSLIQG 473
>gi|258570655|ref|XP_002544131.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
gi|237904401|gb|EEP78802.1| ATP-dependent helicase NAM7 [Uncinocarpus reesii 1704]
Length = 1075
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/107 (55%), Positives = 70/107 (65%), Gaps = 4/107 (3%)
Query: 52 EVGLELKSSA---GAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
EV +EL++ PTE H F WKSTSFDRMQ A++ FAVD+ SVS YI+HRL
Sbjct: 339 EVTIELRTKGDHKSVPTECTHN-FTADYVWKSTSFDRMQTAMKTFAVDEMSVSGYIFHRL 397
Query: 109 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LG V + LPK F+AP LP LN SQV AVK +Q+PLSLIQG
Sbjct: 398 LGSEVAAAPMKTQLPKKFTAPGLPGLNPSQVNAVKAVLQKPLSLIQG 444
>gi|322701174|gb|EFY92925.1| Regulator of nonsense transcripts 1 [Metarhizium acridum CQMa 102]
Length = 1083
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/160 (44%), Positives = 94/160 (58%), Gaps = 26/160 (16%)
Query: 12 LHALDAGDELKLAATSYDASTPGSGPRSR----------GLRFRIILPVT---EVGLELK 58
LH +++GD +KLA G R R G+ + I +P + EV LEL+
Sbjct: 321 LHKIESGD-VKLAV--------GDEMRLRYNGELREPWEGVGYVIKIPNSQSDEVCLELR 371
Query: 59 SSAG---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 115
+ PT+ H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH V
Sbjct: 372 KTGNDKLVPTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQL 430
Query: 116 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ LP+ +SAP LPDLN+SQV A+K +Q+PLSLIQG
Sbjct: 431 QPVQSRLPRKWSAPGLPDLNQSQVDAIKSVLQKPLSLIQG 470
>gi|302306557|ref|NP_982968.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|299788573|gb|AAS50792.4| ABR022Cp [Ashbya gossypii ATCC 10895]
gi|374106171|gb|AEY95081.1| FABR022Cp [Ashbya gossypii FDAG1]
Length = 999
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 68/104 (65%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LELK S P + F WK TS+ RMQ AL+KFAVD +S+S Y+Y+++LGH
Sbjct: 335 EFTLELKPSKAPPPTNLTTGFTAEFVWKGTSYQRMQEALKKFAVDKKSISGYLYYKILGH 394
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V ++ F LPK FS PN LN SQV AV H +QRPLSLIQG
Sbjct: 395 DVPDIEFEVDLPKDFSIPNFTKLNTSQVNAVAHVLQRPLSLIQG 438
>gi|320592037|gb|EFX04476.1| regulator of nonsense [Grosmannia clavigera kw1407]
Length = 1095
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 86/147 (58%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P G+ + I +P EV LEL+ + PTE
Sbjct: 336 LAVGDEMRL---KYKGEL---RPPWEGVGYVIKIPNNQSDEVKLELRKTGNDKSVPTECT 389
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQ+A++ FAVD+ SVS YI+H+LLGH V + LPK F+A
Sbjct: 390 HN-FSADYVWKATSYDRMQIAMKTFAVDEMSVSGYIFHKLLGHEVAVAPMKTSLPKKFTA 448
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ A+K + PLSLIQG
Sbjct: 449 PQLPELNGSQISAIKAVLSTPLSLIQG 475
>gi|400597184|gb|EJP64919.1| Regulator of nonsense transcripts 1 [Beauveria bassiana ARSEF 2860]
Length = 1083
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 52 EVGLELKSSAG---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
EV LEL+ + PT+ H F WK+TS+DRMQLA++ FAVDD SVS +I+H L
Sbjct: 363 EVCLELRKNGNDRSVPTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGFIFHTL 421
Query: 109 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LGH+V + +LPK +SAP LPDLN+SQV A++ +Q+PLSLIQG
Sbjct: 422 LGHDVQLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQKPLSLIQG 468
>gi|322706853|gb|EFY98432.1| Regulator of nonsense transcripts 1 [Metarhizium anisopliae ARSEF
23]
Length = 1083
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/160 (43%), Positives = 94/160 (58%), Gaps = 26/160 (16%)
Query: 12 LHALDAGDELKLAATSYDASTPGSGPRSR----------GLRFRIILPVT---EVGLELK 58
LH +++GD +KLA G R R G+ + I +P + EVGLEL+
Sbjct: 321 LHKIESGD-VKLAV--------GDEMRLRYNGELREPWEGVGYVIKIPNSQSDEVGLELR 371
Query: 59 SSAG---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDE 115
+ PT+ H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH V
Sbjct: 372 KTGNDKLVPTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHTLLGHEVQL 430
Query: 116 VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ LP+ +S P LP+LN+SQ+ A+K +Q+PLSLIQG
Sbjct: 431 QPVQSRLPRKWSVPGLPELNQSQIDAIKSVLQKPLSLIQG 470
>gi|213408485|ref|XP_002175013.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
gi|212003060|gb|EEB08720.1| ATP-dependent helicase NAM7 [Schizosaccharomyces japonicus yFS275]
Length = 926
Score = 114 bits (285), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 57/104 (54%), Positives = 68/104 (65%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVGLEL S P E H F WKSTSFDRMQ AL+ FA D+ +S Y+YH+LLGH
Sbjct: 314 EVGLELNRSDKIPIECTHN-FSVDYVWKSTSFDRMQAALKSFATDNSRLSGYLYHKLLGH 372
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + + LP FS PNLP+LN SQV AV+ + +PLSLIQG
Sbjct: 373 EVPPLTLKTKLPTTFSVPNLPELNSSQVNAVRSVLTQPLSLIQG 416
>gi|85101908|ref|XP_961233.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
gi|18202963|sp|Q9HEH1.1|RENT1_NEUCR RecName: Full=Regulator of nonsense transcripts 1 homolog
gi|11595520|emb|CAC18314.1| probable nonsense-mediated mRNA decay protein [Neurospora crassa]
gi|28922775|gb|EAA31997.1| ATP-dependent helicase NAM7 [Neurospora crassa OR74A]
Length = 1093
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P G+ + I +P EV +EL+ SA PTE
Sbjct: 338 LAVGDEMRL---KYKGEL---RPPWEGVGYVIKIPNNQSDEVEVELRKSANDKSVPTECT 391
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK F
Sbjct: 392 HN-FSADYVWKATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVQVAPTKITMPKKFHV 450
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ A+K + PLSLIQG
Sbjct: 451 PGLPELNASQIAAIKQVLSNPLSLIQG 477
>gi|336263126|ref|XP_003346344.1| hypothetical protein SMAC_07821 [Sordaria macrospora k-hell]
gi|380091672|emb|CCC10804.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1093
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 85/147 (57%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L Y P G+ + I +P EV +EL+ SA PTE
Sbjct: 338 LAVGDEMRL---KYKGEL---RPPWEGVGYVIKIPNNQSDEVEVELRKSANDKSVPTECT 391
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA++ FAVD+ SVS YI+H+LLGH V + +PK F
Sbjct: 392 HN-FSADYVWKATSYDRMQLAMKTFAVDEMSVSGYIFHKLLGHEVQVAPTKITMPKKFHV 450
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ A+K + PLSLIQG
Sbjct: 451 PGLPELNASQIAAIKQVLSNPLSLIQG 477
>gi|255732109|ref|XP_002550978.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
gi|240131264|gb|EER30824.1| ATP-dependent helicase NAM7 [Candida tropicalis MYA-3404]
Length = 993
Score = 113 bits (283), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL +S AP F WK TS+DRMQ A++ FA D++SVS+YIYH+LLGH
Sbjct: 349 EFTLELNTSKIAPPTDLTTDFTAEFVWKGTSYDRMQQAMKDFATDEKSVSSYIYHKLLGH 408
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ V F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 409 EVEPVEFDIELPKRFSHPKLTELNISQTNAVRSVLQRPLSLIQG 452
>gi|358395794|gb|EHK45181.1| hypothetical protein TRIATDRAFT_243374 [Trichoderma atroviride IMI
206040]
Length = 1083
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/147 (45%), Positives = 87/147 (59%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAG---APTESY 68
L GDE++L T + P G+ + I +P + EV LEL+ + P +
Sbjct: 330 LAVGDEMRLRYTG-ELREPW-----EGVGYVIKIPNSQSDEVCLELRKTGNDKLVPIDLS 383
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH + LPK +SA
Sbjct: 384 HN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHILLGHICQPPPMKVTLPKKWSA 442
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN+ QV A+K +QRPLSLIQG
Sbjct: 443 PGLPDLNQGQVDAIKAVLQRPLSLIQG 469
>gi|346326262|gb|EGX95858.1| nonsense transcript regulator [Cordyceps militaris CM01]
Length = 1084
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 57/107 (53%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 52 EVGLELKSSAGA---PTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
EV LEL+ + PT+ H F WK+TS+DRMQLA++ FAVDD SVS +I+H L
Sbjct: 363 EVCLELRKTGNDRSNPTDLSHN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGFIFHTL 421
Query: 109 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LGH+V + +LPK +SAP LPDLN+SQV A++ +Q+PLSLIQG
Sbjct: 422 LGHDVHLQPMKSNLPKKWSAPGLPDLNQSQVDAIRSVLQKPLSLIQG 468
>gi|354544687|emb|CCE41413.1| hypothetical protein CPAR2_304020 [Candida parapsilosis]
Length = 1049
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 68/104 (65%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S AP F WK TS+DRMQ A++ FA+DD+SVS++IYH+LLGH
Sbjct: 372 EFTLELNPSKIAPPTHLTTDFTAEFVWKGTSYDRMQQAMKDFAIDDESVSSFIYHKLLGH 431
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V V F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 432 DVAPVEFDIELPKRFSHPKLTELNISQANAVRSVLQRPLSLIQG 475
>gi|255088141|ref|XP_002505993.1| predicted protein [Micromonas sp. RCC299]
gi|226521264|gb|ACO67251.1| predicted protein [Micromonas sp. RCC299]
Length = 812
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 70/149 (46%), Positives = 87/149 (58%), Gaps = 6/149 (4%)
Query: 11 ELHALDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAG-APTE 66
E+ L GD L+L +Y A SG + ++L T EV LEL+S +G AP E
Sbjct: 239 EIARLVVGDALRLRHAAYPAGKDQSGGATWSAE-GVVLKFTDREEVVLELRSGSGDAPVE 297
Query: 67 SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHF 126
+G F W S SFDR Q A++ FA+D+ SVS YIYH LLGH+V+ LPK
Sbjct: 298 ETNG-FSVDFLWNSISFDRAQAAMKAFALDETSVSGYIYHLLLGHDVEPKPLAVTLPKKL 356
Query: 127 SAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
SAPNLP LN SQ A + +QRPLSLIQG
Sbjct: 357 SAPNLPPLNHSQESAARAVLQRPLSLIQG 385
>gi|403337792|gb|EJY68119.1| hypothetical protein OXYTRI_11366 [Oxytricha trifallax]
Length = 1153
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/141 (46%), Positives = 85/141 (60%), Gaps = 7/141 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDELKL Y+ +SRG RI+ E+ LELK+ G P + F
Sbjct: 449 LVPGDELKLVY-EYEGQPKW---QSRGHIVRIV--NEEICLELKNPKGCPNDP-DIRFTI 501
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
WKSTSFDRM+LAL+ F D+QS+S YI+++LLG+N E + ++PKH S P LP+L
Sbjct: 502 EFIWKSTSFDRMRLALKIFMRDEQSLSNYIFYKLLGYNTQEQFIKTNIPKHLSVPGLPEL 561
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N Q+ AVK A+ PL LIQG
Sbjct: 562 NHFQMNAVKKALITPLCLIQG 582
>gi|19113992|ref|NP_593080.1| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe 972h-]
gi|19924241|sp|Q09820.2|RENT1_SCHPO RecName: Full=ATP-dependent helicase upf1; AltName:
Full=Nonsense-mediated mRNA decay protein upf1; AltName:
Full=Regulator of nonsense transcripts 1 homolog;
AltName: Full=Up-frameshift suppressor 1
gi|4894186|emb|CAA91194.2| ATP-dependent RNA helicase Upf1 [Schizosaccharomyces pombe]
Length = 925
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 67/142 (47%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT-EVGLELKSSAGAPTESYHGLFC 73
L GDE+KL + P S S G +I V+ EVGLELK S P E H F
Sbjct: 278 LAIGDEMKLTYEG-ELRAPWS---STGYVIKIPNNVSDEVGLELKRSDKVPIECTHN-FS 332
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WKSTSFDRMQ ALR FA D +S+++YH+LLGH++ + LP S PNLP
Sbjct: 333 VDYVWKSTSFDRMQTALRLFATDGSRLSSFLYHKLLGHDIPPSFLKPKLPSDLSVPNLPK 392
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ AV+ + +PLSLIQG
Sbjct: 393 LNASQSEAVRAVLSKPLSLIQG 414
>gi|196001321|ref|XP_002110528.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
gi|190586479|gb|EDV26532.1| hypothetical protein TRIADDRAFT_54641 [Trichoplax adhaerens]
Length = 1070
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 71/104 (68%), Gaps = 1/104 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVGLELKS+ P ES F WK+TSFDRM+ A+ KFA+D S++ Y+YHRLLGH
Sbjct: 353 EVGLELKSNFDVP-ESCKEPFEVEFVWKATSFDRMRAAVHKFAIDKTSMNGYLYHRLLGH 411
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+E C LPK + LP+LN SQ A+K+ +Q+PLSLIQG
Sbjct: 412 LVEERPISCKLPKRIAVSGLPELNDSQRTAIKNVLQKPLSLIQG 455
>gi|171693713|ref|XP_001911781.1| hypothetical protein [Podospora anserina S mat+]
gi|170946805|emb|CAP73609.1| unnamed protein product [Podospora anserina S mat+]
Length = 1090
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 57/121 (47%), Positives = 75/121 (61%), Gaps = 7/121 (5%)
Query: 41 GLRFRIILP---VTEVGLELKSSAG---APTESYHGLFCGPSFWKSTSFDRMQLALRKFA 94
G+ + I +P EV LEL+ +A PTE H F WK+TS+DRMQ A++ FA
Sbjct: 349 GVGYVIKIPNNQSDEVTLELRKAANDKSVPTECTHN-FSADYVWKATSYDRMQFAMKTFA 407
Query: 95 VDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 154
VD+ SVS YI+H+LLGH V + +PK F P LP+LN SQ+ A+K + PLSLIQ
Sbjct: 408 VDELSVSGYIFHKLLGHEVAVAPMKTQMPKRFHVPGLPELNHSQITAIKTVLSTPLSLIQ 467
Query: 155 G 155
G
Sbjct: 468 G 468
>gi|401885778|gb|EJT49866.1| ATP dependent helicase [Trichosporon asahii var. asahii CBS 2479]
Length = 1013
Score = 110 bits (274), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/103 (52%), Positives = 71/103 (68%), Gaps = 4/103 (3%)
Query: 53 VGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN 112
+ LE++ S PT+ G F WK+TSFDRMQ A++ FA+D++SVS YI LLGH
Sbjct: 335 IVLEMRRSDNVPTDCREG-FAVDFVWKATSFDRMQQAMKTFAIDEKSVSGYI---LLGHE 390
Query: 113 VDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
VD + R +PK F+AP LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 391 VDPQVLRTQMPKRFTAPGLPELNHSQMAAVKAVLQKPLSLIQG 433
>gi|190349039|gb|EDK41614.2| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 109 bits (273), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 67/104 (64%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL AP F WK TS++RMQ AL+ FAVD++SVS YIYHR+LGH
Sbjct: 305 EFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNRMQHALKSFAVDEKSVSGYIYHRILGH 364
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
NV+ V F +LP+ S PNL LN SQ AV+ +QRPLSLIQG
Sbjct: 365 NVEPVEFSFNLPEKLSIPNLTALNESQENAVRTVLQRPLSLIQG 408
>gi|448531806|ref|XP_003870332.1| Nam7 protein [Candida orthopsilosis Co 90-125]
gi|380354686|emb|CCG24202.1| Nam7 protein [Candida orthopsilosis]
Length = 1014
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/142 (46%), Positives = 81/142 (57%), Gaps = 9/142 (6%)
Query: 17 AGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFC 73
GDE+ L Y S G +G F + LP + E LEL S AP F
Sbjct: 323 VGDEIIL---RYSGS---QGDAWQGQGFILRLPNSYQEEFTLELNPSKVAPPTHLTTDFT 376
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WK TS+DRMQ A++ FA +D SVS++IYH+LLGH+V V F LPK FS P L +
Sbjct: 377 AEFVWKGTSYDRMQQAMKDFATNDDSVSSFIYHKLLGHDVAPVEFDIELPKRFSHPKLTE 436
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ AV+ +QRPLSLIQG
Sbjct: 437 LNVSQANAVRSVLQRPLSLIQG 458
>gi|146411955|ref|XP_001481949.1| hypothetical protein PGUG_05712 [Meyerozyma guilliermondii ATCC
6260]
Length = 949
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 56/104 (53%), Positives = 67/104 (64%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL AP F WK TS++RMQ AL+ FAVD++SVS YIYHR+LGH
Sbjct: 305 EFTLELNPQKNAPPTHLTTNFTAEFVWKGTSYNRMQHALKSFAVDEKSVSGYIYHRILGH 364
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
NV+ V F +LP+ S PNL LN SQ AV+ +QRPLSLIQG
Sbjct: 365 NVEPVEFSFNLPEKLSIPNLTALNESQENAVRTVLQRPLSLIQG 408
>gi|358388726|gb|EHK26319.1| hypothetical protein TRIVIDRAFT_218486 [Trichoderma virens Gv29-8]
Length = 1083
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/147 (43%), Positives = 85/147 (57%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAG---APTESY 68
L GDE++L T G+ + I +P + EV LEL+ + P +
Sbjct: 330 LAVGDEMRLRYTGELRE------EWEGVGYVIKIPNSQSDEVCLELRKTGNDKLVPIDLS 383
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TS+DRMQLA++ FAVDD SVS YI+H LLGH + LPK +SA
Sbjct: 384 HN-FSADYVWKATSYDRMQLAMKTFAVDDMSVSGYIFHILLGHICQPPPMKVTLPKKWSA 442
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LPDLN+ QV A++ +Q+PLSLIQG
Sbjct: 443 PGLPDLNQGQVDAIRAVLQKPLSLIQG 469
>gi|398410035|ref|XP_003856473.1| hypothetical protein MYCGRDRAFT_107419 [Zymoseptoria tritici
IPO323]
gi|339476358|gb|EGP91449.1| hypothetical protein MYCGRDRAFT_107419 [Zymoseptoria tritici
IPO323]
Length = 680
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 64/150 (42%), Positives = 85/150 (56%), Gaps = 17/150 (11%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L T P G+ + I +P EV +EL++ PTE
Sbjct: 333 LAVGDEMRLRYTGE------LRPHWEGVGYVIKIPNNQSDEVTIELRARGDHKSVPTECT 386
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F WK+TSFDRMQLA++ FAVD+ SVS YI+HRLLGH V + +P+ FS
Sbjct: 387 HN-FTADYVWKATSFDRMQLAMKTFAVDEMSVSGYIFHRLLGHEVAAAPMKVQMPRKFSV 445
Query: 129 PNLPDLNRSQVYAVKHA----IQRPLSLIQ 154
PNLPDLN SQ+ AVK ++ PL+ +Q
Sbjct: 446 PNLPDLNGSQIQAVKSERNCLVEGPLNNLQ 475
>gi|365763806|gb|EHN05332.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 971
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|365759093|gb|EHN00906.1| Nam7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1033
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 392 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 451
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 452 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 492
>gi|323347166|gb|EGA81441.1| Nam7p [Saccharomyces cerevisiae Lalvin QA23]
Length = 971
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|6323726|ref|NP_013797.1| ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae S288c]
gi|400350|sp|P30771.1|NAM7_YEAST RecName: Full=ATP-dependent helicase NAM7; AltName:
Full=Nonsense-mediated mRNA decay protein 1; AltName:
Full=Nuclear accommodation of mitochondria 7 protein;
AltName: Full=Up-frameshift suppressor 1
gi|4023|emb|CAA44266.1| helicase [Saccharomyces cerevisiae]
gi|173142|gb|AAA35197.1| zinc finger protein [Saccharomyces cerevisiae]
gi|807962|emb|CAA89226.1| Nam7p [Saccharomyces cerevisiae]
gi|207342353|gb|EDZ70140.1| YMR080Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259148654|emb|CAY81899.1| Nam7p [Saccharomyces cerevisiae EC1118]
gi|285814083|tpg|DAA09978.1| TPA: ATP-dependent RNA helicase NAM7 [Saccharomyces cerevisiae
S288c]
gi|323353063|gb|EGA85363.1| Nam7p [Saccharomyces cerevisiae VL3]
gi|392297240|gb|EIW08340.1| Nam7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|349580361|dbj|GAA25521.1| K7_Nam7p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|323307726|gb|EGA60989.1| Nam7p [Saccharomyces cerevisiae FostersO]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|190408311|gb|EDV11576.1| helicase [Saccharomyces cerevisiae RM11-1a]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|151946238|gb|EDN64469.1| nuclear accommodation of mitochondria [Saccharomyces cerevisiae
YJM789]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|323332050|gb|EGA73461.1| Nam7p [Saccharomyces cerevisiae AWRI796]
Length = 930
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|256273504|gb|EEU08438.1| Nam7p [Saccharomyces cerevisiae JAY291]
Length = 971
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|323336281|gb|EGA77552.1| Nam7p [Saccharomyces cerevisiae Vin13]
Length = 930
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|327200469|pdb|2XZL|A Chain A, Upf1-Rna Complex
Length = 802
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/101 (52%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S Y+Y+++LGH V
Sbjct: 282 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGYLYYKILGHQVV 341
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS PN LN SQ AV H +QRPLSLIQG
Sbjct: 342 DISFDVPLPKEFSIPNFAQLNSSQSNAVSHVLQRPLSLIQG 382
>gi|149237651|ref|XP_001524702.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451299|gb|EDK45555.1| ATP-dependent helicase NAM7 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 977
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 67/104 (64%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P + F WK TS+DRMQ A++ FA D++SVS+YIYH+LLGH
Sbjct: 327 EFTLELNPSKIPPPTNLTNGFTAEFVWKGTSYDRMQQAMKDFATDEESVSSYIYHKLLGH 386
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V + F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 387 DVAPIEFDITLPKKFSHPKLTELNISQTNAVRSVLQRPLSLIQG 430
>gi|255713384|ref|XP_002552974.1| KLTH0D05786p [Lachancea thermotolerans]
gi|238934354|emb|CAR22536.1| KLTH0D05786p [Lachancea thermotolerans CBS 6340]
Length = 982
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 78/122 (63%), Gaps = 3/122 (2%)
Query: 37 PRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKF 93
P G + + LP + ++ LELK S P S++ F WK TS+DRMQ A++KF
Sbjct: 315 PEWEGHGYIVRLPNSFQDQLTLELKPSKTPPPTSFNTGFTAEFVWKGTSYDRMQEAMKKF 374
Query: 94 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 153
AV +SVS ++Y+++LGH V ++ F +LP+ FS P+ LN SQ A++H +QRPLSLI
Sbjct: 375 AVVKKSVSGFLYYKILGHEVPDLEFDVNLPEQFSIPHFTQLNVSQANAIRHVLQRPLSLI 434
Query: 154 QG 155
QG
Sbjct: 435 QG 436
>gi|254585189|ref|XP_002498162.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
gi|238941056|emb|CAR29229.1| ZYRO0G03740p [Zygosaccharomyces rouxii]
Length = 944
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 68/104 (65%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LELK S P F WK TS+DRMQ AL+KFA+D +S+S ++Y+++LGH
Sbjct: 324 EFTLELKPSKTPPPTHLGTGFTAEFIWKGTSYDRMQDALKKFALDKKSISGFLYYKILGH 383
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V ++ F LPK FS P LN SQ +AV+HA+QRPLSLIQG
Sbjct: 384 QVVDIAFDVPLPKEFSIPFFAPLNASQSHAVEHALQRPLSLIQG 427
>gi|340914927|gb|EGS18268.1| eliminates the production of nonsense-containing-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 1098
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 63/147 (42%), Positives = 82/147 (55%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSS---AGAPTESY 68
L GDE++L Y P G+ + I +P EV LEL+ S PT+
Sbjct: 339 LAVGDEMRL---KYKGDL---RPYWEGVGYVIKIPNNQSDEVTLELRKSPNDKSVPTD-V 391
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
F WK+TS+DRMQ A++ FAVD+ SVS YI+H+LLGH V + LPK F
Sbjct: 392 TTCFSADYVWKATSYDRMQAAMKTFAVDEMSVSGYIFHKLLGHEVAVAPMKTQLPKKFHV 451
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P LP+LN SQ+ A+K + PLSLIQG
Sbjct: 452 PGLPELNHSQITAIKTVLSTPLSLIQG 478
>gi|167516556|ref|XP_001742619.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779243|gb|EDQ92857.1| predicted protein [Monosiga brevicollis MX1]
Length = 856
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 71/104 (68%), Gaps = 2/104 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL++ PT+ F WKS +FDRMQ A++ FAVD++SVSA+IYH+LLGH
Sbjct: 290 EYALELRNK-DVPTQCTQN-FMVEFIWKSITFDRMQNAMKTFAVDERSVSAHIYHQLLGH 347
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ L + +PK FS LP+LN SQ+ A++ +QRPLSLIQG
Sbjct: 348 QIEPALIKVTMPKRFSVKGLPELNHSQIEAIRAVLQRPLSLIQG 391
>gi|365989598|ref|XP_003671629.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
gi|343770402|emb|CCD26386.1| hypothetical protein NDAI_0H02120 [Naumovozyma dairenensis CBS 421]
Length = 993
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 66/101 (65%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ +L+KFAVD +S+S Y+Y+++LGH V
Sbjct: 340 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDSLKKFAVDKKSISGYLYYKILGHQVV 399
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F +PK FS P+ LN SQ AV+H +QRPLSLIQG
Sbjct: 400 DITFDVPMPKQFSIPHFTQLNESQSKAVQHVLQRPLSLIQG 440
>gi|366987891|ref|XP_003673712.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
gi|342299575|emb|CCC67331.1| hypothetical protein NCAS_0A07730 [Naumovozyma castellii CBS 4309]
Length = 992
Score = 106 bits (265), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 67/101 (66%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P + F WK TS+DRMQ +L+KFA+D +S+S Y+Y+++LGH V
Sbjct: 340 LELKPSKVPPPTNLTTGFTAEFIWKGTSYDRMQDSLKKFAIDKKSISGYLYYKILGHQVV 399
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F +PK FS P+ LN SQ AV+H +QRPLSLIQG
Sbjct: 400 DITFDVPMPKQFSIPHFTQLNDSQSNAVQHVLQRPLSLIQG 440
>gi|68478193|ref|XP_716838.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
gi|68478314|ref|XP_716778.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438461|gb|EAK97791.1| hypothetical protein CaO19.939 [Candida albicans SC5314]
gi|46438523|gb|EAK97852.1| hypothetical protein CaO19.8554 [Candida albicans SC5314]
Length = 1019
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 65/104 (62%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P F WK TS+DRMQ A++ FA D++SVS++IYH+LLGH
Sbjct: 359 EFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAMKDFATDEESVSSFIYHKLLGH 418
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 419 EVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQG 462
>gi|238882462|gb|EEQ46100.1| ATP-dependent helicase NAM7 [Candida albicans WO-1]
Length = 1019
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 65/104 (62%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P F WK TS+DRMQ A++ FA D++SVS++IYH+LLGH
Sbjct: 359 EFTLELNPSKIIPPTQLTTDFTAEFVWKGTSYDRMQQAMKDFATDEESVSSFIYHKLLGH 418
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 419 EVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQG 462
>gi|367008616|ref|XP_003678809.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
gi|359746466|emb|CCE89598.1| hypothetical protein TDEL_0A02660 [Torulaspora delbrueckii]
Length = 908
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 54/122 (44%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 37 PRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKF 93
P G + + LP + E LELK S P F WK TS+DRMQ AL+KF
Sbjct: 274 PEWEGRGYIVRLPNSMQDEFTLELKPSKQPPPTHLGTGFTAEFIWKGTSYDRMQDALKKF 333
Query: 94 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 153
A+D +S+S ++Y+++LGH + ++ F +LPK FS + LN SQ +AV+H +QRPLSLI
Sbjct: 334 ALDKKSISGFLYYKILGHQIVDIQFEVNLPKEFSIKHFAQLNASQSHAVEHVLQRPLSLI 393
Query: 154 QG 155
QG
Sbjct: 394 QG 395
>gi|344301641|gb|EGW31946.1| ATP-dependent helicase NAM7 [Spathaspora passalidarum NRRL Y-27907]
Length = 1000
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/104 (50%), Positives = 64/104 (61%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P F WK TS+DRMQ A++ FA D+ SVS+YIYH+LLGH
Sbjct: 359 EFTLELNPSKVTPPTDLTTDFTAEFVWKGTSYDRMQQAMKDFATDETSVSSYIYHKLLGH 418
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + F LP+ FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 419 EVVPIEFDTELPQRFSHPALTELNVSQTNAVRTVLQRPLSLIQG 462
>gi|341881801|gb|EGT37736.1| hypothetical protein CAEBREN_04117 [Caenorhabditis brenneri]
Length = 1054
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 82/144 (56%), Gaps = 8/144 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDEL+L ++ + GS G F+I P E+G+E++ + +
Sbjct: 323 LAKGDELRL---KHNQTVDGSEWAKVGNVFKI--PDNHSEEIGIEIRGQVDRSVQESRIM 377
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F W +T+FDR AL+ D+QSVS Y+Y +LLG VDE++ + LP+ SAP L
Sbjct: 378 FTVDVVWNATTFDRQYRALQALQTDNQSVSPYLYAKLLGKPVDELMLKFELPRRLSAPGL 437
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
PDLN SQ+ AVK + RPLSLIQG
Sbjct: 438 PDLNSSQMQAVKQVLTRPLSLIQG 461
>gi|116197821|ref|XP_001224722.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88178345|gb|EAQ85813.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 1071
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 82/147 (55%), Gaps = 13/147 (8%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSA---GAPTESY 68
L GDE++L D TP G+ + I +P EV LEL+ S PT+
Sbjct: 315 LAVGDEMRLKYKG-DLRTPW-----EGVGYVIKIPNNQSDEVTLELRKSGNDKSVPTDVA 368
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
F WK+TS+DRMQ A++ FAVD+ S+S YI+H+LLGH V + +PK F
Sbjct: 369 TN-FSADYVWKATSYDRMQFAMKTFAVDEMSLSGYIFHKLLGHEVAVAPMKTQMPKKFHV 427
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LP+LN SQ+ A+K + PLSLIQG
Sbjct: 428 AGLPELNHSQITAIKTVLSNPLSLIQG 454
>gi|406695570|gb|EKC98873.1| hypothetical protein A1Q2_06844 [Trichosporon asahii var. asahii
CBS 8904]
Length = 1000
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/93 (54%), Positives = 65/93 (69%), Gaps = 4/93 (4%)
Query: 63 APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHL 122
PT+ G F WK+TSFDRMQ A++ FA+D++SVS YI LLGH VD + R +
Sbjct: 332 VPTDCREG-FAVDFVWKATSFDRMQQAMKTFAIDEKSVSGYI---LLGHEVDPQVLRTQM 387
Query: 123 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
PK F+AP LP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 388 PKRFTAPGLPELNHSQMAAVKAVLQKPLSLIQG 420
>gi|401624314|gb|EJS42376.1| nam7p [Saccharomyces arboricola H-6]
Length = 971
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 64/101 (63%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFA+D +S+S ++Y+++LGH V
Sbjct: 330 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAIDKKSISGFLYYKILGHQVV 389
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK FS N LN SQ AV H +QRPLSLIQG
Sbjct: 390 DISFDVPLPKEFSISNFAQLNSSQSNAVSHVLQRPLSLIQG 430
>gi|358341434|dbj|GAA49117.1| regulator of nonsense transcripts 1 [Clonorchis sinensis]
Length = 1183
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 74/107 (69%), Gaps = 7/107 (6%)
Query: 52 EVGLELKSSAGAPTE--SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSV-SAYIYHRL 108
EVGLE+K + P++ +Y F WKST FDRM A+ K + + YI++RL
Sbjct: 228 EVGLEMKQADVVPSDPVTYMVEF----KWKSTPFDRMIQAISKVTEEQCDLLPPYIFYRL 283
Query: 109 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LGH +D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQG
Sbjct: 284 LGHEMDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQG 330
>gi|355767117|gb|EHH62580.1| hypothetical protein EGM_20966 [Macaca fascicularis]
Length = 1041
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/104 (51%), Positives = 68/104 (65%), Gaps = 6/104 (5%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ +EL+SS GAP E H F WKSTSFDRMQ AL+ FAVD+ SVS YIYH+LLGH
Sbjct: 318 EIAIELRSSVGAPVEVTHN-FQVDFVWKSTSFDRMQSALKTFAVDETSVSGYIYHKLLGH 376
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++V+ +C LPK F+ +R + + RPLSLIQG
Sbjct: 377 EVEDVIIKCQLPKRFTV----FFSRRRA-SPTSTTPRPLSLIQG 415
>gi|241955273|ref|XP_002420357.1| ATP-dependent RNA helicase, putative; atp-dependent helicase, SFI
superfamily, putative [Candida dubliniensis CD36]
gi|223643699|emb|CAX41433.1| ATP-dependent RNA helicase, putative [Candida dubliniensis CD36]
Length = 1016
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/104 (50%), Positives = 65/104 (62%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P + F WK TS+ RMQ A++ FA D++SVS++IYH+LLGH
Sbjct: 361 EFTLELNPSKIIPPTNLTTDFTAEFVWKGTSYTRMQQAMKDFATDEESVSSFIYHKLLGH 420
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + F LPK FS P L +LN SQ AV+ +QRPLSLIQG
Sbjct: 421 EVLPIEFDIDLPKKFSHPKLTELNVSQTNAVRTVLQRPLSLIQG 464
>gi|403215170|emb|CCK69670.1| hypothetical protein KNAG_0C05720 [Kazachstania naganishii CBS
8797]
Length = 1000
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 65/101 (64%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFAVD +S+S ++Y+++LGH V
Sbjct: 359 LELKPSKTPPPTHLTTGFTAEFIWKGTSYDRMQDALKKFAVDKKSISGFLYYKILGHEVV 418
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+V F LPK FS + LN SQ AVKH ++RPLSLIQG
Sbjct: 419 DVSFDVPLPKEFSISHFAHLNASQSNAVKHVLERPLSLIQG 459
>gi|444316488|ref|XP_004178901.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
gi|387511941|emb|CCH59382.1| hypothetical protein TBLA_0B05540 [Tetrapisispora blattae CBS 6284]
Length = 1056
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 72/122 (59%), Gaps = 3/122 (2%)
Query: 37 PRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKF 93
P G + + LP + E LELK + P F WK TS+DRMQ AL+KF
Sbjct: 380 PEWEGRGYIVRLPNSFQDEFTLELKPNKEPPPTHLGTGFTAEFIWKGTSYDRMQDALKKF 439
Query: 94 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 153
A+D +S+S Y+Y+++LGH V ++ F +P FS P LN SQ AV++ +Q+PLSLI
Sbjct: 440 AIDKKSISGYLYYKILGHQVVDIAFDISMPSEFSIPKFAQLNSSQTNAVRNVLQKPLSLI 499
Query: 154 QG 155
QG
Sbjct: 500 QG 501
>gi|410074371|ref|XP_003954768.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
gi|372461350|emb|CCF55633.1| hypothetical protein KAFR_0A01950 [Kazachstania africana CBS 2517]
Length = 995
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/101 (51%), Positives = 63/101 (62%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LELK S P F WK TS+DRMQ AL+KFAVD +S+S Y+Y+++LGH V
Sbjct: 342 LELKPSKTPPPIHLTSGFTAEFIWKGTSYDRMQDALKKFAVDKKSISGYLYYKILGHEVV 401
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ F LPK S P LN SQ AVK +QRPLSLIQG
Sbjct: 402 DISFDVPLPKEMSIPQFTKLNDSQSNAVKKVLQRPLSLIQG 442
>gi|301092662|ref|XP_002997185.1| nonsense transcript regulator [Phytophthora infestans T30-4]
gi|262111572|gb|EEY69624.1| nonsense transcript regulator [Phytophthora infestans T30-4]
Length = 687
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/110 (50%), Positives = 72/110 (65%), Gaps = 4/110 (3%)
Query: 48 LPVTEVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHR 107
L +EV LE++SS P E G WKSTSFDRMQ A++ FAVDD S++ Y+YH+
Sbjct: 16 LEESEVALEMRSS-NVPIEITDGYLVD-FVWKSTSFDRMQAAMKTFAVDDTSLTGYLYHK 73
Query: 108 LLGHNVDEVLFRC--HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+LGH+V R + HFSAP LP+LN Q+ AVK +++PLSLIQG
Sbjct: 74 ILGHDVGVQALRIPRSVGTHFSAPGLPELNTFQMEAVKGVLEQPLSLIQG 123
>gi|256082379|ref|XP_002577434.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662752|emb|CAZ33672.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1325
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 52 EVGLELKSSAGAPTE--SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQS--VSAYIYHR 107
EVGLE+K P E +Y F WKST FDRM+ A+ D+Q + YI++R
Sbjct: 368 EVGLEMKQVIDTPLEPVTYKIEF----KWKSTPFDRMRRAI-SVVTDEQHGLLPPYIFYR 422
Query: 108 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LLG +D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQG
Sbjct: 423 LLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQG 470
>gi|323454972|gb|EGB10841.1| hypothetical protein AURANDRAFT_22049 [Aureococcus anophagefferens]
Length = 1026
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 64/145 (44%), Positives = 81/145 (55%), Gaps = 7/145 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L GDELK+ S A G + G R L E+ LEL++S APTE F
Sbjct: 291 LAVGDELKIRLNSGGARQHGKPWEASGHVLR--LADGEIALELRTS-NAPTEVTECGFVV 347
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR----CHLPKHFSAPN 130
WK TS+DRMQ AL+ AVDD S+S Y+YHRLLGH+V+ + + + P
Sbjct: 348 DFVWKGTSYDRMQNALKNLAVDDTSLSGYLYHRLLGHDVEPQVLKGGAAASSSRRAGVPG 407
Query: 131 LPDLNRSQVYAVKHAIQRPLSLIQG 155
LPDLN SQ AV+ + +PLSLIQG
Sbjct: 408 LPDLNHSQAAAVRSVVTQPLSLIQG 432
>gi|406607433|emb|CCH41224.1| ATP-dependent helicase NAM7 [Wickerhamomyces ciferrii]
Length = 1038
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/84 (57%), Positives = 57/84 (67%)
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK TS+DRMQ A++ FA D SVS YIYH+LLGH V+EV F LP FS P
Sbjct: 387 FTAEFVWKGTSYDRMQNAMKSFATDQLSVSGYIYHKLLGHEVNEVEFDIKLPSKFSIPGF 446
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
+LN SQ AVK+ +Q+PLSLIQG
Sbjct: 447 AELNVSQASAVKNVLQKPLSLIQG 470
>gi|256082381|ref|XP_002577435.1| nonsense-mediated mRNA decay protein 1 (rent1) [Schistosoma
mansoni]
gi|238662753|emb|CAZ33673.1| nonsense-mediated mRNA decay protein 1 (rent1),putative
[Schistosoma mansoni]
Length = 1301
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 52 EVGLELKSSAGAPTE--SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQS--VSAYIYHR 107
EVGLE+K P E +Y F WKST FDRM+ A+ D+Q + YI++R
Sbjct: 344 EVGLEMKQVIDTPLEPVTYKIEF----KWKSTPFDRMRRAI-SVVTDEQHGLLPPYIFYR 398
Query: 108 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LLG +D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQG
Sbjct: 399 LLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQG 446
>gi|412990683|emb|CCO18055.1| ATP-dependent helicase NAM7 [Bathycoccus prasinos]
Length = 1020
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 66/147 (44%), Positives = 82/147 (55%), Gaps = 13/147 (8%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLEL--KSSAGAPTESYHGLFCGP 75
GDEL S D R G R + E+GLEL +S AP G +
Sbjct: 335 GDELVAILKSVDGREIW---RGDGTVIRYNVKEEEIGLELDARSCVDAPVHVTSG-YEIE 390
Query: 76 SFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR-------CHLPKHFSA 128
WKS S+DR Q AL+ FAVDD SVS YIYH+LLGH+V+E + + +SA
Sbjct: 391 CVWKSVSYDRCQAALKAFAVDDTSVSGYIYHKLLGHDVNESVMHHRGSNIDVSGKQKWSA 450
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
PNLP+LN SQ+ AVK +Q+PLSLIQG
Sbjct: 451 PNLPELNHSQIAAVKMVLQQPLSLIQG 477
>gi|76155569|gb|AAX26862.2| SJCHGC04134 protein [Schistosoma japonicum]
Length = 441
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 54/108 (50%), Positives = 73/108 (67%), Gaps = 9/108 (8%)
Query: 52 EVGLELKSSAGAPTE--SYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQS--VSAYIYHR 107
EVGLE+K P E +Y F WKST FDRM+ A+ D+Q + YI++R
Sbjct: 270 EVGLEMKQVIDTPLEPVTYKIEF----KWKSTPFDRMRRAI-SVVTDEQHGLLPPYIFYR 324
Query: 108 LLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LLG +D+++ +C+LPK +SAP+LP+LN SQV+AVK +QRPLSLIQG
Sbjct: 325 LLGQELDDMVLKCNLPKRYSAPDLPELNHSQVFAVKTVLQRPLSLIQG 372
>gi|156836785|ref|XP_001642437.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
gi|156112963|gb|EDO14579.1| hypothetical protein Kpol_337p1 [Vanderwaltozyma polyspora DSM
70294]
Length = 999
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 37 PRSRGLRFRIILPVT---EVGLELK-SSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRK 92
P G + + LP + E LELK S APT+ G F WK TS+DRMQ AL+K
Sbjct: 326 PEWEGRGYIVRLPNSFKDEFTLELKPSKIPAPTQLGTG-FTAEFIWKGTSYDRMQDALKK 384
Query: 93 FAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSL 152
FA+D +S+S Y+Y+++LGH V ++ F +P S P+ LN SQ AV H +Q+PLSL
Sbjct: 385 FAIDKKSISGYLYYKILGHEVHDIEFDVPIPTELSIPHFARLNASQASAVAHVLQKPLSL 444
Query: 153 IQG 155
IQG
Sbjct: 445 IQG 447
>gi|50286349|ref|XP_445603.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524908|emb|CAG58514.1| unnamed protein product [Candida glabrata]
Length = 964
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 58/142 (40%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 17 AGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFC 73
GDE+ L+ + G +G F + LP + LEL+ S P F
Sbjct: 294 VGDEMILSYSGI------QGEDWKGTGFIVRLPNSFKDMFTLELRPSKTPPPTHLTTGFT 347
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPD 133
WK+TS+DRMQ AL+ FAVD +S+S Y+Y+++LGH V ++ F +PK S P
Sbjct: 348 AEFIWKATSYDRMQTALKNFAVDKKSISGYLYYKILGHQVVDLHFDVPMPKELSLPGYTK 407
Query: 134 LNRSQVYAVKHAIQRPLSLIQG 155
LN SQ AV+H +QRPLSLIQG
Sbjct: 408 LNASQSKAVEHVLQRPLSLIQG 429
>gi|452824582|gb|EME31584.1| dynamin GTPase [Galdieria sulphuraria]
Length = 1012
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/110 (53%), Positives = 73/110 (66%), Gaps = 9/110 (8%)
Query: 52 EVGLEL---KSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
E+ LEL K+S+ AP + H F WKST+FDRMQ AL+ FAVD+ SVS YIYHR+
Sbjct: 356 EIALELRSGKASSSAPRDC-HKDFSVEVIWKSTTFDRMQKALQAFAVDETSVSGYIYHRI 414
Query: 109 LGHNVDEVLFRCHLPKH---FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LGH V+ HL KH +AP LP+LN SQ AVK A++ PLSL+QG
Sbjct: 415 LGHEVNRQTI--HLFKHPNNLNAPGLPELNPSQKAAVKAALESPLSLVQG 462
>gi|320168749|gb|EFW45648.1| RENT1 [Capsaspora owczarzaki ATCC 30864]
Length = 1120
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/114 (49%), Positives = 76/114 (66%), Gaps = 5/114 (4%)
Query: 46 IILP--VTE-VGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSA 102
++LP TE + LEL SS G PT H F WKST+FDRMQ AL+ FAVD++ VS+
Sbjct: 412 LVLPGSTTEGITLELWSSNGVPTHLTHN-FHVDFVWKSTTFDRMQAALKTFAVDEKCVSS 470
Query: 103 YIYHRLLGHNVD-EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
YI+H+LLG V+ + R +P++ +APNLP LN SQ+ A+ ++ P SLIQG
Sbjct: 471 YIFHKLLGKEVELKDEHRVSVPENLNAPNLPKLNESQMSAITRVLREPFSLIQG 524
>gi|294657547|ref|XP_002770466.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
gi|199432775|emb|CAR65809.1| DEHA2E12430p [Debaryomyces hansenii CBS767]
Length = 985
Score = 101 bits (252), Expect = 3e-19, Method: Composition-based stats.
Identities = 51/104 (49%), Positives = 64/104 (61%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E LEL S P F WK TS++RMQ A++ FA + +SVS+YIYH++LGH
Sbjct: 351 EFTLELNPSKLQPPTHLATDFTAEFVWKGTSYERMQQAMKDFATEKESVSSYIYHKILGH 410
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V + F LP FS PNL +LN SQ AV+ +QRPLSLIQG
Sbjct: 411 EVAPIEFDIKLPNKFSHPNLTELNMSQTNAVRSVLQRPLSLIQG 454
>gi|50303751|ref|XP_451821.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640953|emb|CAH02214.1| KLLA0B06435p [Kluyveromyces lactis]
Length = 969
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/143 (43%), Positives = 82/143 (57%), Gaps = 7/143 (4%)
Query: 19 DELKLAATSYDASTPGSGPR---SRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLF 72
+ELK+A + SGP+ G F I LP + E LELK S P + F
Sbjct: 287 NELKVAVGD-EMILKYSGPQHADWTGKGFIIQLPNSFKDEFTLELKPSQKTPPTNCTTGF 345
Query: 73 CGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 132
W+ TS+ RMQ ALRKFAV +S+S ++Y+++LG V +V F LPK P+
Sbjct: 346 TAVFVWRGTSYIRMQEALRKFAVTKKSLSGFLYYKILGQEVPDVEFDVELPKSIFVPHFT 405
Query: 133 DLNRSQVYAVKHAIQRPLSLIQG 155
+LN+SQ AVKH +QRPLSLIQG
Sbjct: 406 ELNQSQSNAVKHVLQRPLSLIQG 428
>gi|367000487|ref|XP_003684979.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
gi|357523276|emb|CCE62545.1| hypothetical protein TPHA_0C03950 [Tetrapisispora phaffii CBS 4417]
Length = 990
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 71/122 (58%), Gaps = 3/122 (2%)
Query: 37 PRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKF 93
P G + + LP + E LELK S P F WK TS+DRMQ AL+ F
Sbjct: 323 PEWEGRGYIVHLPNSFKDEFSLELKPSKTPPPIHLGTGFTAEFIWKGTSYDRMQDALKTF 382
Query: 94 AVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLI 153
AVD +S+S Y+Y+++LGH V ++ F +PK S P+ LN SQ AV + +Q+PLSLI
Sbjct: 383 AVDKKSISGYLYYKILGHEVLDIAFDVPIPKELSIPHFAQLNASQASAVANVLQKPLSLI 442
Query: 154 QG 155
QG
Sbjct: 443 QG 444
>gi|367038941|ref|XP_003649851.1| hypothetical protein THITE_130005 [Thielavia terrestris NRRL 8126]
gi|346997112|gb|AEO63515.1| hypothetical protein THITE_130005 [Thielavia terrestris NRRL 8126]
Length = 1196
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/110 (47%), Positives = 70/110 (63%), Gaps = 7/110 (6%)
Query: 52 EVGLELKSSA---GAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
EV LEL+ S PT+ F WK+TS+DRMQLA++ FAVD+ SVS YI+H+L
Sbjct: 371 EVHLELRKSGNDKAVPTDVTTN-FSADYVWKATSYDRMQLAMKTFAVDEMSVSGYIFHKL 429
Query: 109 LGHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLS---LIQG 155
LGH V V + +PK F AP LP+LN SQ+ A+K + PL+ L++G
Sbjct: 430 LGHEVALVPMKTPMPKKFHAPGLPELNHSQITAIKTVLSTPLNHKCLVEG 479
>gi|308505126|ref|XP_003114746.1| CRE-SMG-2 protein [Caenorhabditis remanei]
gi|308258928|gb|EFP02881.1| CRE-SMG-2 protein [Caenorhabditis remanei]
Length = 1067
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/144 (40%), Positives = 78/144 (54%), Gaps = 8/144 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDEL+L + + GS G +I P EVG+E++ +
Sbjct: 323 LAKGDELRL---KHSQTVDGSEWTKTGSVMKI--PDNHSEEVGIEIRGVVERSVMESRIM 377
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F W +T+FDR AL D ++VS Y+YH+LLG VDE++ + LP+ SAP L
Sbjct: 378 FTVDVVWNATTFDRQYRALHALLNDPKAVSPYLYHKLLGKPVDEMMLKFELPRRLSAPGL 437
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
PDLN SQ+ AVK + RPLSLIQG
Sbjct: 438 PDLNSSQMQAVKQVLTRPLSLIQG 461
>gi|294929939|ref|XP_002779430.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
gi|239888538|gb|EER11225.1| nonsense-mediated mRNA decay protein, putative [Perkinsus marinus
ATCC 50983]
Length = 923
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 64/146 (43%), Positives = 85/146 (58%), Gaps = 8/146 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELK---SSAGAPTESYHGL 71
L GDE++L D + G G +++ EV +EL+ S P + G
Sbjct: 339 LVPGDEIRLKLA--DWGSDNEGWIGVGHVTKLMQSSEEVCVELRPQYSHQKGPWDITSG- 395
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD-EVLFRCH-LPKHFSAP 129
+ WK+TSFDRMQ AL+ FAVDD SVS IYH LLG ++ R H PK+++AP
Sbjct: 396 YTVEFVWKATSFDRMQNALKAFAVDDTSVSGVIYHMLLGQAIETNTTIRIHNPPKNWTAP 455
Query: 130 NLPDLNRSQVYAVKHAIQRPLSLIQG 155
NLP LN SQV AV+ A+++PLSLIQG
Sbjct: 456 NLPQLNHSQVQAVQKALEQPLSLIQG 481
>gi|448086434|ref|XP_004196100.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359377522|emb|CCE85905.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 958
Score = 99.0 bits (245), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 63/101 (62%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LEL S P F WK TS+DRMQ A++ FA+ +SVS+YIYH++LGH V+
Sbjct: 329 LELNPSKVPPPVHLTSGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVE 388
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V F LPK S +L +LN SQ AVK +QRPLSLIQG
Sbjct: 389 PVEFDMKLPKKLSHASLTELNSSQTNAVKSVLQRPLSLIQG 429
>gi|448081930|ref|XP_004195009.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
gi|359376431|emb|CCE87013.1| Piso0_005544 [Millerozyma farinosa CBS 7064]
Length = 959
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 63/101 (62%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
LEL S P F WK TS+DRMQ A++ FA+ +SVS+YIYH++LGH V+
Sbjct: 329 LELNPSKVPPPVHLTTGFTAEFVWKGTSYDRMQQAMKTFALKKESVSSYIYHKILGHEVE 388
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V F LPK S +L +LN SQ AVK +QRPLSLIQG
Sbjct: 389 PVEFDMKLPKKLSHASLTELNSSQTNAVKSVLQRPLSLIQG 429
>gi|50551471|ref|XP_503209.1| YALI0D23881p [Yarrowia lipolytica]
gi|49649077|emb|CAG81409.1| YALI0D23881p [Yarrowia lipolytica CLIB122]
Length = 964
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/147 (40%), Positives = 76/147 (51%), Gaps = 10/147 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG---APTESY 68
+ GDE+KL ++ S S PR G + P EV LE++ PT
Sbjct: 295 ITVGDEVKLY---FEGSESSSTPRWSGTGIVVKTPDNFSEEVTLEIRKGGDEKQIPTGES 351
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
H F W ++ RMQ AL+ FA DD SVS YIYH LLGH++ E LP+ FS
Sbjct: 352 HP-FALEFVWNDITYRRMQQALKLFATDDYSVSGYIYHNLLGHDIPETFLDVPLPEQFSI 410
Query: 129 PNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+LN SQV AVK ++RP SLIQG
Sbjct: 411 SGFNELNVSQVNAVKQVLRRPFSLIQG 437
>gi|308807923|ref|XP_003081272.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
gi|116059734|emb|CAL55441.1| RNA helicase, putative (ISS) [Ostreococcus tauri]
Length = 963
Score = 97.4 bits (241), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 52/106 (49%), Positives = 68/106 (64%), Gaps = 4/106 (3%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+E+ AP ES G + WK TS++R Q AL+ FAVD+ S S YIYH+LLGH
Sbjct: 350 EVGVEM-YGMDAPVESSTG-YSVDFLWKGTSYERAQQALKSFAVDETSCSGYIYHKLLGH 407
Query: 112 NVDEVLFRCHLPK--HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V++ +PK +AP LP+LN SQ AVK ++RPLSL+QG
Sbjct: 408 EVEDQKLHVDVPKGTKLTAPGLPELNDSQFNAVKEVLERPLSLVQG 453
>gi|389583252|dbj|GAB65987.1| regulator of nonsense transcripts [Plasmodium cynomolgi strain B]
Length = 1470
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/159 (41%), Positives = 86/159 (54%), Gaps = 24/159 (15%)
Query: 15 LDAGDELKLAATSYDAST-PGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFC 73
L AGDELKL+ T D + G SR I E+ LEL++S+ A + +
Sbjct: 571 LVAGDELKLSYTYPDGTIWSCEGHISR------IHNTEEIALELRTSSTANGPWVNNITT 624
Query: 74 GPSF---WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF------------ 118
G + WKST++DRMQLAL +FA D SVS Y+YH+LLGH V E
Sbjct: 625 GYTVEFVWKSTAYDRMQLALNEFAQDSYSVSGYLYHKLLGHEVTEESLNYYKTALSNQVH 684
Query: 119 --RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
R ++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 685 GKRTQRIVNYSAPNLAALNHSQIDAIKKSLVSPLSLIQG 723
>gi|367025919|ref|XP_003662244.1| hypothetical protein MYCTH_106618 [Myceliophthora thermophila ATCC
42464]
gi|347009512|gb|AEO56999.1| hypothetical protein MYCTH_106618 [Myceliophthora thermophila ATCC
42464]
Length = 662
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 58/141 (41%), Positives = 78/141 (55%), Gaps = 14/141 (9%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAG---APTESY 68
L GDE++L Y P G+ + I +P EV LEL+ SA PT+
Sbjct: 337 LAVGDEMRL---KYKGDL---RPPWEGVGYVIKIPNNQSDEVTLELRKSANDKMVPTDVA 390
Query: 69 HGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSA 128
F WK+TS+DRMQ A++ FAVD+ S+S YI+H+LLGH V + +PK+F
Sbjct: 391 TN-FSADYVWKATSYDRMQFAMKTFAVDEMSLSGYIFHKLLGHEVAVAPMKIQMPKNFHV 449
Query: 129 PNLPDLNRSQVYAVKHAIQRP 149
P LP+LN SQV A+K RP
Sbjct: 450 PGLPELNHSQVTAIK-TFSRP 469
>gi|325184899|emb|CCA19391.1| RNA helicase putative [Albugo laibachii Nc14]
Length = 1058
Score = 95.1 bits (235), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/148 (40%), Positives = 83/148 (56%), Gaps = 16/148 (10%)
Query: 15 LDAGDELKL-----AATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYH 69
L GDE++L + Y GSG R + +EV +E++++ P E
Sbjct: 332 LVPGDEIRLRLGPSSILLYGGEWEGSGHVLR-------IEESEVTMEMRNNV-VPVEITD 383
Query: 70 GLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRC--HLPKHFS 127
G F WK+TSFDRMQ AL+ FAVDD S++ Y+YH++LGH+VD R +
Sbjct: 384 G-FLVDFVWKATSFDRMQAALKTFAVDDTSLTGYLYHKILGHDVDMQALRVPRSIDTKLL 442
Query: 128 APNLPDLNRSQVYAVKHAIQRPLSLIQG 155
AP LP+LN Q+ AVK + +PLSLIQG
Sbjct: 443 APGLPELNPPQMEAVKGVLSQPLSLIQG 470
>gi|237838453|ref|XP_002368524.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
gi|211966188|gb|EEB01384.1| regulator of nonsense transcripts UPF1, putative [Toxoplasma gondii
ME49]
Length = 1449
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPNL LN S
Sbjct: 546 WKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPNLAPLNPS 605
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q+ A+++A+Q PLSLIQG
Sbjct: 606 QMLAIRYALQHPLSLIQG 623
>gi|221505815|gb|EEE31460.1| regulator or nonsense transcripts RENT1, putative [Toxoplasma
gondii VEG]
Length = 1449
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPNL LN S
Sbjct: 546 WKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPNLAPLNPS 605
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q+ A+++A+Q PLSLIQG
Sbjct: 606 QMLAIRYALQHPLSLIQG 623
>gi|221484204|gb|EEE22500.1| regulator of nonsense transcripts 1 protein, putative [Toxoplasma
gondii GT1]
Length = 1449
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPNL LN S
Sbjct: 546 WKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPNLAPLNPS 605
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q+ A+++A+Q PLSLIQG
Sbjct: 606 QMLAIRYALQHPLSLIQG 623
>gi|268569138|ref|XP_002640442.1| C. briggsae CBR-SMG-2 protein [Caenorhabditis briggsae]
Length = 1051
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 76/144 (52%), Gaps = 8/144 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILP---VTEVGLELKSSAGAPTESYHGL 71
L GDEL+L ++ + GS G +I P EVG+E++ +
Sbjct: 324 LAKGDELRL---KHNQTVDGSEWSRIGSVMKI--PDNHSEEVGIEIRGQVDRSVMESRIM 378
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F W +T+F R AL D +SVS Y+YH+LLG DE++ + LP+ SAP L
Sbjct: 379 FTVDVVWNATTFHRQYNALDALVNDQKSVSPYLYHKLLGKPFDEMMLKFELPRRLSAPGL 438
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
PDLN SQ AVK + RPLSLIQG
Sbjct: 439 PDLNSSQSQAVKQVLTRPLSLIQG 462
>gi|401402591|ref|XP_003881287.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
gi|325115699|emb|CBZ51254.1| putative regulator of nonsense transcripts UPF1 [Neospora caninum
Liverpool]
Length = 1428
Score = 94.4 bits (233), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 59/78 (75%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
WKSTSF+RMQ ALR+ AVD+ SVS+Y+YH L+G ++ + + +P SAPNL LN S
Sbjct: 553 WKSTSFERMQAALRQLAVDEISVSSYLYHTLMGKQMEHQIIQTPMPLQISAPNLAPLNPS 612
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q+ A+++A+Q PLSLIQG
Sbjct: 613 QMLAIRYALQHPLSLIQG 630
>gi|326436499|gb|EGD82069.1| ATP-dependent helicase NAM7 [Salpingoeca sp. ATCC 50818]
Length = 1192
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 58/78 (74%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
W ST FDRMQ A+R+FAV++ ++S Y++HR LGH ++ + +PK SAP LP+LN S
Sbjct: 533 WNSTVFDRMQSAMRRFAVNEAAMSDYLFHRFLGHQLNLPQLKFDMPKRLSAPGLPELNHS 592
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q+ A++ +Q+PLSLIQG
Sbjct: 593 QLNAIRTVLQQPLSLIQG 610
>gi|145350386|ref|XP_001419588.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144579820|gb|ABO97881.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 797
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 66/104 (63%), Gaps = 2/104 (1%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EVG+E+ AP E +G + WK TS++R Q AL FA D+ SVS YIY +L+G
Sbjct: 275 EVGVEM-YGMDAPVEYTNG-YSVDFLWKGTSYERAQQALESFAEDETSVSGYIYLKLMGK 332
Query: 112 NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ +++ PK +AP LP+LN+SQ AVK +QRPLSL+QG
Sbjct: 333 DPEDMFLSGDFPKKLTAPGLPELNQSQHDAVKTVLQRPLSLVQG 376
>gi|17510163|ref|NP_490829.1| Protein SMG-2 [Caenorhabditis elegans]
gi|351051256|emb|CCD73461.1| Protein SMG-2 [Caenorhabditis elegans]
Length = 1069
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGL 71
L GDEL+L + + GS G F+I P EVG+E++ + +
Sbjct: 329 LAKGDELRL---KHSQTVDGSEWTKIGSVFKI--PDNHGDEVGIEIRGAVDKSVMESRIM 383
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F W +T+F+R AL D +++S Y+Y +LLGH +E++ + LP+ S L
Sbjct: 384 FTVDVVWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGL 443
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQ+ AVK + RPLSLIQG
Sbjct: 444 PELNSSQMQAVKQVLTRPLSLIQG 467
>gi|17380277|sp|O76512.1|RENT1_CAEEL RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=ATP-dependent helicase smg-2; AltName:
Full=Nonsense mRNA reducing factor 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|3328177|gb|AAC26789.1| nonsense-mediated mRNA decay trans-acting factor [Caenorhabditis
elegans]
Length = 1069
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 8/144 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGL 71
L GDEL+L + + GS G F+I P EVG+E++ + +
Sbjct: 329 LAKGDELRL---KHSQTVDGSEWTKIGSVFKI--PDNHGDEVGIEIRGAVDKSVMESRIM 383
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F W +T+F+R AL D +++S Y+Y +LLGH +E++ + LP+ S L
Sbjct: 384 FTVDVVWNATTFERQYKALAALLNDSKAISPYLYQKLLGHPAEEMMLKFDLPRRLSVAGL 443
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQ+ AVK + RPLSLIQG
Sbjct: 444 PELNSSQMQAVKQVLTRPLSLIQG 467
>gi|156096655|ref|XP_001614361.1| regulator of nonsense transcripts [Plasmodium vivax Sal-1]
gi|148803235|gb|EDL44634.1| regulator of nonsense transcripts, putative [Plasmodium vivax]
Length = 1539
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/161 (41%), Positives = 91/161 (56%), Gaps = 27/161 (16%)
Query: 15 LDAGDELKLAATSYDASTPGS--GPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLF 72
L AGDELKL+ T Y T S G SR I E+ LEL++S+ A + +
Sbjct: 686 LVAGDELKLSYT-YPNGTVWSCEGHISR------IHNTEEIALELRTSSTANGPWVNNIT 738
Query: 73 CGPSF---WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV---LFRCHL---- 122
G + WKST++DRMQLAL +FA + S+S Y+YH+LLGH V E ++ L
Sbjct: 739 TGYAVEFVWKSTAYDRMQLALNEFAQNSYSLSGYLYHKLLGHEVSEESLNYYKTALSSQV 798
Query: 123 ------PK--HFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
P+ ++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 799 HGKRSPPRIVNYSAPNLAALNHSQIDAIKKSLVSPLSLIQG 839
>gi|339251874|ref|XP_003371160.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
gi|316968637|gb|EFV52895.1| hypothetical protein Tsp_09417 [Trichinella spiralis]
Length = 1030
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT---EVGLELKSSAGAPTESYHGL 71
L GDEL+L +++ G R+ G ++ P EVG+EL ++ AP
Sbjct: 322 LMTGDELRL-----NSNFDGKVWRASGHVIKV--PDNFGEEVGIELINAHDAPPPDVTYG 374
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
+ WKSTSFDRM +ALRK DD VS I+ ++LGH+ + PKH+SAP L
Sbjct: 375 YSVDFVWKSTSFDRMFIALRKLT-DDGFVSHAIHRKILGHDYEAPPLNILYPKHYSAPGL 433
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
P+LN SQV AV+ + R +SLIQG
Sbjct: 434 PELNHSQVMAVREVLTRSISLIQG 457
>gi|281210252|gb|EFA84419.1| helicase [Polysphondylium pallidum PN500]
Length = 1113
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 59/141 (41%), Positives = 80/141 (56%), Gaps = 6/141 (4%)
Query: 18 GDELKLAATSYDASTPGSGPRSRGLRFRIILPV-TEVGLELKSSAGAPTESYHGLFCGPS 76
GDELKL D+ P R + E+ LEL +S APT++ G F
Sbjct: 402 GDELKLIYAG-DSQYPEWESTGRVTKINDESEAYMEISLELYNSHNAPTKA-TGKFKIDM 459
Query: 77 FWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCH--LPKHFSAPNLPDL 134
W+STSFDRM AL+ FAV S+S+++YH LLGH+ D L + + +P +F+ NLP L
Sbjct: 460 LWRSTSFDRMHAALKAFAVSTDSISSHLYHALLGHD-DRRLPKTNVPMPTNFAVHNLPPL 518
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQ+ A ++ PLSLIQG
Sbjct: 519 NNSQISAAMKVLKSPLSLIQG 539
>gi|221055089|ref|XP_002258683.1| regulator of nonsense transcripts [Plasmodium knowlesi strain H]
gi|193808753|emb|CAQ39455.1| regulator of nonsense transcripts, putative [Plasmodium knowlesi
strain H]
Length = 1516
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/159 (40%), Positives = 84/159 (52%), Gaps = 24/159 (15%)
Query: 15 LDAGDELKLAATSYDAST-PGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFC 73
L AGDELKL+ T D + G SR I E+ LEL++S A +
Sbjct: 662 LVAGDELKLSYTYPDGTIWSCEGHISR------IHNTEEIALELRTSNTANGPWVDNITT 715
Query: 74 GPSF---WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF------------ 118
G + WKST++DRMQLAL +FA + S+S Y+YH+LLGH V E
Sbjct: 716 GYTVEFVWKSTAYDRMQLALNEFAQNSYSLSGYLYHKLLGHEVSEDSLNYYKAALTNQIH 775
Query: 119 --RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
R ++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 776 GKRTPRIANYSAPNLAALNHSQIDAIKKSLVSPLSLIQG 814
>gi|124802033|ref|XP_001347342.1| regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
gi|23494920|gb|AAN35255.1|AE014829_55 regulator of nonsense transcripts, putative [Plasmodium falciparum
3D7]
Length = 1554
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 60/158 (37%), Positives = 87/158 (55%), Gaps = 23/158 (14%)
Query: 15 LDAGDELKLAATSYDAST-PGSGPRSRGLRFRIILPVTEVGLELKSSA---GAPTESYHG 70
L AGDELK++ T D S G SR + E+ LEL++S G ++
Sbjct: 657 LVAGDELKISYTYPDGSVWCCEGHISR------LHNTEEISLELRTSCTSNGPWVDNITT 710
Query: 71 LFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLF------------ 118
F WKST++DRMQLAL +FA++ S+S ++YH+LLGH++ E
Sbjct: 711 GFTVEFIWKSTAYDRMQLALNEFALNSYSLSGFLYHKLLGHDISEDSLEYNKNTFHKLMH 770
Query: 119 -RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ +++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 771 KKVMSIRNYSAPNLAPLNHSQIDAIKRSLLSPLSLIQG 808
>gi|159487559|ref|XP_001701790.1| UPF1 protein [Chlamydomonas reinhardtii]
gi|158281009|gb|EDP06765.1| UPF1 protein [Chlamydomonas reinhardtii]
Length = 800
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/105 (45%), Positives = 63/105 (60%), Gaps = 1/105 (0%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
EV LEL ++ E F W+ TSFDRM+ AL F S+S Y+YH +LGH
Sbjct: 269 EVCLELFTNVSDVPEDCTVGFSVDFVWRGTSFDRMRNALNTFRKYSASISGYLYHLILGH 328
Query: 112 NVDEVLFRCHLPKH-FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
V+ V + LPK P+LP+LN SQ++AVK +Q+PLSLIQG
Sbjct: 329 PVESVTLKIPLPKAGLGVPSLPELNHSQLHAVKSVLQQPLSLIQG 373
>gi|302829609|ref|XP_002946371.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
gi|300268117|gb|EFJ52298.1| hypothetical protein VOLCADRAFT_86581 [Volvox carteri f.
nagariensis]
Length = 1135
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 54/80 (67%), Gaps = 1/80 (1%)
Query: 77 FWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKH-FSAPNLPDLN 135
W+ TS+DRM+ AL F S+S Y+YH +LGH V+ V + LPK F+ P LP+LN
Sbjct: 461 VWRGTSYDRMRNALNTFRKYSASISGYLYHLILGHPVESVTLKIPLPKAGFAVPTLPELN 520
Query: 136 RSQVYAVKHAIQRPLSLIQG 155
SQ++AVK + +PLSLIQG
Sbjct: 521 HSQLHAVKSVLHQPLSLIQG 540
>gi|82915224|ref|XP_729015.1| nonsense mRNA reducing factor 1 [Plasmodium yoelii yoelii 17XNL]
gi|23485801|gb|EAA20580.1| nonsense mRNA reducing factor 1-related [Plasmodium yoelii yoelii]
Length = 1297
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 35/167 (20%)
Query: 18 GDELKLAATSYDASTPG-SGPRSRGLRFRIILPVTEVGLELK---SSAGAPTESYHGLFC 73
GDELK++ T + + G G SR + E+ LELK + G + + F
Sbjct: 527 GDELKISYTYPNGNIWGCEGHISR------LNSNEEIALELKVLYNIDGPWNYNINTGFV 580
Query: 74 GPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHN-VDE----------------- 115
WKST++DRMQLAL +FA + S+S Y+YH+LLGH+ +DE
Sbjct: 581 VEFVWKSTAYDRMQLALNEFAFNSFSLSGYLYHKLLGHDIIDEPIDYNKKEFNLNNDNKK 640
Query: 116 -------VLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
L+ + ++SAPNL LN SQ+ A+K ++ PLSLIQG
Sbjct: 641 YNKKLNDNLYTSYKIVNYSAPNLAPLNHSQIDAIKKSLNSPLSLIQG 687
>gi|320580629|gb|EFW94851.1| ATP-dependent helicase NAM7 [Ogataea parapolymorpha DL-1]
Length = 909
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 7/144 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEV-GLELKSSA--GAPTESYHGL 71
L GD++ L Y+ S G RI E LEL S PT + G
Sbjct: 249 LAVGDQMIL---RYNGSELAEPWEQSGFIVRIPSATRETFTLELIDSKNKSVPTHLHTG- 304
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK TS+ RMQ AL+K AV+ +SVS +IY+ L+G + + FR K +S PN
Sbjct: 305 FTAELVWKGTSYARMQDALKKLAVNKKSVSEHIYYALMGIDAPSIEFRVKKKKSYSIPNF 364
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
LN SQ A+ + + +PLSLIQG
Sbjct: 365 AKLNASQENAIHNVLSKPLSLIQG 388
>gi|328865229|gb|EGG13615.1| helicase [Dictyostelium fasciculatum]
Length = 1162
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 72/143 (50%), Gaps = 7/143 (4%)
Query: 17 AGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLE--LKSSAGAPTESYHGLFCG 74
GDELK+ S+ P R I +E +E L+ P F
Sbjct: 428 VGDELKV---SFKGDRDYPEPWESSGRITRIDEESEASMEITLELYNHNPPNKSKSKFKI 484
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPK--HFSAPNLP 132
W+STSFDR+ +AL+ FA+ ++S+Y+YH LLGH D + +P+ +F P LP
Sbjct: 485 DMVWRSTSFDRILIALKAFAIKQDAISSYLYHALLGHQPDATKVKVTVPQPTNFVLPGLP 544
Query: 133 DLNRSQVYAVKHAIQRPLSLIQG 155
LN SQ+ A ++ PLSLIQG
Sbjct: 545 PLNASQISAACSVLKSPLSLIQG 567
>gi|254571547|ref|XP_002492883.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
gi|238032681|emb|CAY70704.1| ATP-dependent RNA helicase of the SFI superfamily, required for
nonsense mediated mRNA decay and for [Komagataella
pastoris GS115]
Length = 941
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTE---VGLELKSSAGAPTESYHGL 71
+ GDE+ L YD + +G + I LP T LEL+ S+ P ++
Sbjct: 261 IAVGDEIIL---HYDGI---KEEKWQGSGYVIKLPATYSEGFTLELQPSSVKPPTEHNVG 314
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK SF RMQ AL FA + +S+S +Y LLGH ++ F LP+ S PN
Sbjct: 315 FRAEIVWKGISFQRMQAALTTFA-EKKSISKDLYDILLGHKEEQPEFTAKLPEAISVPNF 373
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
LN SQV AVK +Q+ LSLIQG
Sbjct: 374 TQLNPSQVNAVKSVLQQRLSLIQG 397
>gi|328353104|emb|CCA39502.1| Regulator of nonsense transcripts 1 [Komagataella pastoris CBS
7435]
Length = 967
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 74/144 (51%), Gaps = 10/144 (6%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTE---VGLELKSSAGAPTESYHGL 71
+ GDE+ L YD + +G + I LP T LEL+ S+ P ++
Sbjct: 287 IAVGDEIIL---HYDGI---KEEKWQGSGYVIKLPATYSEGFTLELQPSSVKPPTEHNVG 340
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNL 131
F WK SF RMQ AL FA + +S+S +Y LLGH ++ F LP+ S PN
Sbjct: 341 FRAEIVWKGISFQRMQAALTTFA-EKKSISKDLYDILLGHKEEQPEFTAKLPEAISVPNF 399
Query: 132 PDLNRSQVYAVKHAIQRPLSLIQG 155
LN SQV AVK +Q+ LSLIQG
Sbjct: 400 TQLNPSQVNAVKSVLQQRLSLIQG 423
>gi|145499757|ref|XP_001435863.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402999|emb|CAK68466.1| unnamed protein product [Paramecium tetraurelia]
Length = 928
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/107 (42%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 52 EVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH 111
E+ LEL + P + G + W ST+F RMQ+ L+ F +++ S S YIY +LG
Sbjct: 285 EICLELHQNDPPPNNTDEG-YTVECIWVSTTFKRMQIGLKTFNLNESSTSNYIYKMILGR 343
Query: 112 NVDEVLFRC---HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+D + ++P+ SAPNLPDLN Q AVK A++ PLSLIQG
Sbjct: 344 -IDTLAPPTKVENIPQKLSAPNLPDLNVYQADAVKKALKSPLSLIQG 389
>gi|66805537|ref|XP_636490.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
gi|74852418|sp|Q54I89.1|RENT1_DICDI RecName: Full=Regulator of nonsense transcripts 1; AltName:
Full=Up-frameshift suppressor 1 homolog
gi|60464869|gb|EAL62985.1| hypothetical protein DDB_G0288923 [Dictyostelium discoideum AX4]
Length = 1331
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 12/157 (7%)
Query: 3 LPVGHTCVELHALDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAG 62
P + +E + GDELKL + +ST G R I + LE KS
Sbjct: 410 FPFSRSDLEFKVV-PGDELKL---QFISSTGGVIEWEDTGRVIHIDDENLLSLETKSRCS 465
Query: 63 ---APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH-NVDEVLF 118
P SY W+STS +R+ A++ FA+ +Q++S+Y+YH LLGH ++
Sbjct: 466 FDSGPKGSYRMEMV----WRSTSSERILSAMKSFAIKEQALSSYLYHALLGHPDIPPAPL 521
Query: 119 RCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
LP +F NLP LN SQ+ AV + PLSLIQG
Sbjct: 522 DIQLPTNFHLKNLPRLNESQISAVNKVLTAPLSLIQG 558
>gi|330843269|ref|XP_003293581.1| hypothetical protein DICPUDRAFT_84133 [Dictyostelium purpureum]
gi|325076068|gb|EGC29887.1| hypothetical protein DICPUDRAFT_84133 [Dictyostelium purpureum]
Length = 795
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/193 (31%), Positives = 89/193 (46%), Gaps = 17/193 (8%)
Query: 3 LPVGHTCVELHALDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAG 62
P + +E + GDELKL S+ ST + G R+I E L L++
Sbjct: 417 FPFSRSDLEFKVV-PGDELKLQFISH--STGSADWEDTG---RVIRIDNENMLSLETKTK 470
Query: 63 APTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGH-NVDEVLFRCH 121
+S G + W+STS +R+ A++ FA+ ++++S+Y+YH LLGH +
Sbjct: 471 CNIDSNKGSYRMEMVWRSTSSERILSAMKSFAIKEEALSSYLYHALLGHQEIPPTKLEIE 530
Query: 122 LPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQGMNQRSNGLHHQPGGAGIGNSANTNRL 181
LP +F NLP LN SQ AV + P LI +Q N L I + N N L
Sbjct: 531 LPTNFHIKNLPRLNESQTNAVNKVLTSP--LILSKDQLWNSL--------ISHFKNKNVL 580
Query: 182 RNKSNLNHRPSGA 194
S N +PS
Sbjct: 581 VEGSLTNLKPSAV 593
>gi|118388103|ref|XP_001027152.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila]
gi|89308922|gb|EAS06910.1| phage head-tail adaptor, putative family protein [Tetrahymena
thermophila SB210]
Length = 1112
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 54/81 (66%), Gaps = 3/81 (3%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEV---LFRCHLPKHFSAPNLPDL 134
WK T+ R++ ++KF D++ +S+++Y ++LGH +E LPKH+S P +P+L
Sbjct: 383 WKHTAVKRIKKGIKKFWQDEKCISSFLYFQILGHQNEEQQTPTLDIQLPKHYSLPKMPEL 442
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N QV AVK A+Q+PL LIQG
Sbjct: 443 NYYQVEAVKKALQQPLCLIQG 463
>gi|260950771|ref|XP_002619682.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
gi|238847254|gb|EEQ36718.1| hypothetical protein CLUG_00841 [Clavispora lusitaniae ATCC 42720]
Length = 967
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 55 LELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVD 114
+EL+ S P ++ G F WK T + RMQ AL +FA ++SVSAY+YH++LGH+V
Sbjct: 355 VELQPSV-VPPQATTG-FSAEIVWKGTPYQRMQHALFRFATSNESVSAYVYHKILGHDVV 412
Query: 115 EVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
EV F + LN SQ AV HAI PL+LIQG
Sbjct: 413 EVEFDGE--NSLNNKRCSALNASQRAAVAHAIASPLTLIQG 451
>gi|340504626|gb|EGR31053.1| upf1 regulator of nonsense transcripts, putative [Ichthyophthirius
multifiliis]
Length = 928
Score = 74.7 bits (182), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/80 (43%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVL--FRCHLPKHFSAPNLPDLN 135
WK T+ R++ ++KF D+Q +S+++Y +LGH E + LP+ +S PN+P+LN
Sbjct: 262 WKHTAVKRIKKGIKKFWQDEQCISSFLYFSILGHQNQEDMPTLTIDLPQTYSLPNMPELN 321
Query: 136 RSQVYAVKHAIQRPLSLIQG 155
QV AVK A+Q+PL LIQG
Sbjct: 322 YYQVEAVKKALQQPLCLIQG 341
>gi|68064751|ref|XP_674359.1| regulator of nonsense transcripts [Plasmodium berghei strain ANKA]
gi|56492877|emb|CAI02490.1| regulator of nonsense transcripts, putative [Plasmodium berghei]
Length = 720
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 29/133 (21%)
Query: 52 EVGLELK---SSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
E+ LELK + G + + F WKST++DRMQLAL +FA + S+S Y+YH+L
Sbjct: 268 EIALELKVLYNIDGPWNYNINTGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGYLYHKL 327
Query: 109 LGHN-VDEVL-------------------------FRCHLPKHFSAPNLPDLNRSQVYAV 142
LGH+ +DE + + ++SAPNL LN SQ+ A+
Sbjct: 328 LGHDIIDEPIDYNKKELSLNNDNKRYNYNKKTNDNLSTYKIVNYSAPNLAPLNHSQIDAI 387
Query: 143 KHAIQRPLSLIQG 155
+ ++ PLSLIQG
Sbjct: 388 QKSLNSPLSLIQG 400
>gi|145491971|ref|XP_001431984.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399091|emb|CAK64586.1| unnamed protein product [Paramecium tetraurelia]
Length = 935
Score = 73.2 bits (178), Expect = 1e-10, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 38 RSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDD 97
+S+G ++I E+ LEL + P G + W ST+F RMQ+ L+ F
Sbjct: 279 QSKGTVIKVI-NNEEICLELHQNDPPPNNIEEG-YTVECIWVSTTFKRMQIGLKTFLTQS 336
Query: 98 QSVSAYIYHRLLGHNVDEVLFRC---HLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQ 154
S S Y+Y +LG +D + +P+ SAPNLPDLN Q AVK A++ PLSLIQ
Sbjct: 337 SSTSNYLYKMILGR-IDTLAPPTAVESIPQKLSAPNLPDLNVYQADAVKKALKSPLSLIQ 395
Query: 155 G 155
G
Sbjct: 396 G 396
>gi|70934595|ref|XP_738502.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514772|emb|CAH87140.1| hypothetical protein PC302334.00.0 [Plasmodium chabaudi chabaudi]
Length = 348
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/134 (35%), Positives = 69/134 (51%), Gaps = 30/134 (22%)
Query: 52 EVGLELK---SSAGAPTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRL 108
E+ LELK + G ++ + F WKST++DRMQLAL +FA + S+S ++YH+L
Sbjct: 186 EIALELKVLYNIDGPWNDNINTGFVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKL 245
Query: 109 LGHNV---------DEVLFRCHLPKH------------------FSAPNLPDLNRSQVYA 141
LGH++ E K+ +SAPNL LN SQ+ A
Sbjct: 246 LGHDIIDEPINYNKKEFSLNSDSKKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDA 305
Query: 142 VKHAIQRPLSLIQG 155
++ ++ PLSLIQG
Sbjct: 306 IQKSLNSPLSLIQG 319
>gi|70949042|ref|XP_743968.1| regulator of nonsense transcripts [Plasmodium chabaudi chabaudi]
gi|56523717|emb|CAH78222.1| regulator of nonsense transcripts, putative [Plasmodium chabaudi
chabaudi]
Length = 670
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 27/111 (24%)
Query: 72 FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNV------------------ 113
F WKST++DRMQLAL +FA + S+S ++YH+LLGH++
Sbjct: 12 FVVEFVWKSTAYDRMQLALNEFAFNSFSLSGHLYHKLLGHDIIDEPINYNKKEFSLNSDS 71
Query: 114 ---------DEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
++ + ++SAPNL LN SQ+ A++ ++ PLSLIQG
Sbjct: 72 KKYGYNKKSNDNFSTSYKIVNYSAPNLAPLNHSQIDAIQKSLNSPLSLIQG 122
>gi|339252438|ref|XP_003371442.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
gi|316968330|gb|EFV52623.1| hypothetical protein Tsp_11650 [Trichinella spiralis]
Length = 650
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 70/141 (49%), Gaps = 6/141 (4%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVTEVGLELKSSAGAPTESYHGLFCG 74
L AGDEL L ++ G ++ G ++ EV ++L ++ AP +
Sbjct: 61 LMAGDELIL-----NSDFNGKVWKASGRVMKVPDFGEEVAIQLMNANDAPPCYVTNGYSV 115
Query: 75 PSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDL 134
+S DRM ALRK +D VS I +LGH+ + P H+SAP LP+L
Sbjct: 116 HFGLRSAYIDRMLTALRKLTKED-FVSHAIQRTILGHDYEAPPLDISYPNHYSAPGLPEL 174
Query: 135 NRSQVYAVKHAIQRPLSLIQG 155
N SQV AV+ + R +SLIQG
Sbjct: 175 NHSQVMAVREVLTRSISLIQG 195
>gi|164659902|ref|XP_001731075.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
gi|159104973|gb|EDP43861.1| hypothetical protein MGL_2074 [Malassezia globosa CBS 7966]
Length = 1019
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 63/143 (44%), Gaps = 8/143 (5%)
Query: 15 LDAGDELKLAATSYDASTPGSGPRSRGLRFRIILPVT--EVGLELKSSAGAPTESYHGLF 72
L GDEL L T A P +RF P + EV E+ P E +
Sbjct: 332 LSMGDELLLRYTGSMA--PAWESTVTVVRFS---PTSSMEVACEVPKHLSPPLECTTN-Y 385
Query: 73 CGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP 132
W ++ RM+ AL +F+ +S Y+ LLG + + +P+ LP
Sbjct: 386 MLEFVWIGITYSRMKNALSRFSRGRPCMSTYLQKVLLGIPSKAIPLQVQMPRRLHVSGLP 445
Query: 133 DLNRSQVYAVKHAIQRPLSLIQG 155
+LN SQ+ A+K + PLSLIQG
Sbjct: 446 ELNYSQLTALKTVLTSPLSLIQG 468
>gi|300176550|emb|CBK24215.2| unnamed protein product [Blastocystis hominis]
Length = 939
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 56/106 (52%), Gaps = 8/106 (7%)
Query: 53 VGLELKSSAGAPTESYHGL---FCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLL 109
+ + +KS PT G FC W +T F RM A+ + + + ++ +IY +L
Sbjct: 340 IKVLMKSQEEPPTGRQTGFSVTFC----WNATPFTRMLKAVSSY-FNPERMTDFIYQSIL 394
Query: 110 GHNVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
G+NV + + K +S PN LN Q+ AVK+A+ + L+LIQG
Sbjct: 395 GYNVPDKEYPPVYIKSYSLPNFKQLNGFQLDAVKNALNKHLTLIQG 440
>gi|294875682|ref|XP_002767434.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869001|gb|EER00152.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 559
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/33 (66%), Positives = 29/33 (87%)
Query: 123 PKHFSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
PK+++APNLP LN SQV AV+ A+++PLSLIQG
Sbjct: 5 PKNWTAPNLPQLNHSQVQAVQKALEQPLSLIQG 37
>gi|167384498|ref|XP_001736978.1| nonsense-mediated mRNA decay protein [Entamoeba dispar SAW760]
gi|165900437|gb|EDR26756.1| nonsense-mediated mRNA decay protein, putative [Entamoeba dispar
SAW760]
Length = 937
Score = 46.2 bits (108), Expect = 0.014, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 20/98 (20%)
Query: 78 WKSTSFDRMQLALRKFAVDD-----QSVSAYIYHRLLGHNVDEV------LFR----CHL 122
W S F R ++AL F + S+S Y+ RLLG + E+ F+ +L
Sbjct: 326 WLSIPFRRKRMALLDFCRTEVEPIAASMSKYLRDRLLGMPITEIDRQMEQQFKEEKEMYL 385
Query: 123 PKH-----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+H SAPNLP LN+ Q V+ + + LSLIQG
Sbjct: 386 SRHPTEASLSAPNLPPLNQVQFDVVRKSFTKQLSLIQG 423
>gi|340053654|emb|CCC47947.1| putative nonsense mRNA reducing factor 1 [Trypanosoma vivax Y486]
Length = 861
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 89 ALRKFAVDDQSVSAYIYHRLLGHNVDEVLFR-CHLPKHFSAPNLPDLNRSQVYAVKHAIQ 147
AL F+ S+SAY+Y +LGH VD+ R A L +LN SQ AV+ A++
Sbjct: 350 ALSTFSRRSTSLSAYLYFTILGH-VDKAEERYSETDIELPAKRLSNLNNSQEQAVRTALK 408
Query: 148 RPLSLIQG 155
+PL+LIQG
Sbjct: 409 KPLTLIQG 416
>gi|407039213|gb|EKE39508.1| regulator of nonsense transcripts, putative [Entamoeba nuttalli
P19]
Length = 937
Score = 44.7 bits (104), Expect = 0.040, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 47/98 (47%), Gaps = 20/98 (20%)
Query: 78 WKSTSFDRMQLALRKFAVDDQ-----SVSAYIYHRLLGHNVDEV------LFR----CHL 122
W S F R ++AL F + S+S Y+ RLLG + E+ F+ +L
Sbjct: 326 WLSIPFRRKKVALLDFCRTENEPIEASMSKYLRDRLLGMPITEMDRQMEQQFKEEKEMYL 385
Query: 123 PKH-----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
H SAPNLP LN+ Q VK + + LSLIQG
Sbjct: 386 NSHPTEASLSAPNLPPLNQVQFDVVKKSFTKQLSLIQG 423
>gi|440295047|gb|ELP87976.1| nonsense-mediated mRNA decay protein, putative [Entamoeba invadens
IP1]
Length = 943
Score = 44.3 bits (103), Expect = 0.048, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 64/131 (48%), Gaps = 27/131 (20%)
Query: 52 EVGLELKSSAGAP------TESYHGLFCGPSF-WKSTSFDRMQLALRKFAVDDQ-----S 99
++ ++ + + G P T+ ++ + F W S F R + AL+ F ++ +
Sbjct: 298 DITVQFEKTPGVPIEKQIITQQHNAMKFSICFQWMSIPFKRKKTALQMFGESEEPHDFPT 357
Query: 100 VSAYIYHRLLG--HNVDEVLFR--------CHLPKH-----FSAPNLPDLNRSQVYAVKH 144
+S+Y+ +RLLG N ++++ +L +H +APNLP LN+ Q V
Sbjct: 358 MSSYLRNRLLGMPKNPMDMVYEKDFKDEKEAYLAQHPTLQSMNAPNLPTLNQVQYEVVMK 417
Query: 145 AIQRPLSLIQG 155
+ + LSLIQG
Sbjct: 418 SFTQSLSLIQG 428
>gi|123508693|ref|XP_001329696.1| regulator of nonsense transcripts 1 [Trichomonas vaginalis G3]
gi|121912743|gb|EAY17561.1| regulator of nonsense transcripts 1, putative [Trichomonas
vaginalis G3]
Length = 882
Score = 43.9 bits (102), Expect = 0.077, Method: Composition-based stats.
Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 14/100 (14%)
Query: 64 PTESYHGLFCGPSFWKSTSFDRMQLALRKFAVDDQSVSAYIYHR-LLGHNVDEVLFRCHL 122
PT +F W TSF RM A+ K Q+ +A I ++GH D +
Sbjct: 319 PTPPEDAIFTVQLVWLDTSFVRMIGAIAKMPQSPQTSTANIIKEVIMGHLPDTI------ 372
Query: 123 PKHFSAPN-------LPDLNRSQVYAVKHAIQRPLSLIQG 155
P PN +P LN SQV AV +A++ P +IQG
Sbjct: 373 PTLPGEPNRSPVVKGIPTLNLSQVNAVSYALKSPFCMIQG 412
>gi|71417104|ref|XP_810474.1| regulator of nonsense transcripts 1 [Trypanosoma cruzi strain CL
Brener]
gi|70875009|gb|EAN88623.1| regulator of nonsense transcripts 1, putative [Trypanosoma cruzi]
Length = 839
Score = 42.7 bits (99), Expect = 0.16, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 40/78 (51%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
+ STS R AL D S+SAY+Y +LG + + + L +LN S
Sbjct: 327 YDSTSDQRKCHALNLMMTDWSSLSAYLYFTILGRAEEAAKRFSEVDINLPRGRLSNLNSS 386
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q AV+ A++ PL+LIQG
Sbjct: 387 QDTAVRTALRNPLTLIQG 404
>gi|67481561|ref|XP_656130.1| regulator of nonsense transcripts [Entamoeba histolytica HM-1:IMSS]
gi|56473310|gb|EAL50744.1| regulator of nonsense transcripts, putative [Entamoeba histolytica
HM-1:IMSS]
gi|449704720|gb|EMD44907.1| Hypothetical protein EHI5A_012990 [Entamoeba histolytica KU27]
Length = 937
Score = 42.4 bits (98), Expect = 0.22, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 20/98 (20%)
Query: 78 WKSTSFDRMQLALRKFAVDDQ-----SVSAYIYHRLLGHNVDEV------LFR----CHL 122
W S F R + AL F + S+S Y+ RLLG + E+ F+ +L
Sbjct: 326 WLSIPFHRKKEALLDFCRTENEPIEASMSKYLRDRLLGMPITEMDRQMEQQFKEEKEMYL 385
Query: 123 PKH-----FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
H SAPNLP LN+ Q V+ + + LSLIQG
Sbjct: 386 NSHPTEASLSAPNLPPLNQVQFDVVRKSFTKQLSLIQG 423
>gi|407838371|gb|EKG00049.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi]
Length = 839
Score = 42.0 bits (97), Expect = 0.29, Method: Composition-based stats.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
+ STS R AL D S+SAY+Y +LG + + L +LN S
Sbjct: 327 YDSTSDQRKCHALNLMMTDWASLSAYLYFTILGRAEEAAKRFSEVDIDLPRGRLSNLNSS 386
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q AV+ A++ PL+LIQG
Sbjct: 387 QDTAVRTALRNPLTLIQG 404
>gi|300175280|emb|CBK20591.2| unnamed protein product [Blastocystis hominis]
Length = 861
Score = 41.6 bits (96), Expect = 0.34, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 5/74 (6%)
Query: 87 QLALRKFAVDDQSVSAYIYHRLLGHNV---DEVLFRCHLPKH--FSAPNLPDLNRSQVYA 141
+L K D++++S +IY+ LG+ + H + F APNL LNRSQ A
Sbjct: 375 RLTAIKLLDDEKAISQHIYNIFLGNKSMMNKREFYVSHRDREVSFDAPNLRPLNRSQHDA 434
Query: 142 VKHAIQRPLSLIQG 155
+ +A+Q +LIQG
Sbjct: 435 IAYALQSEFTLIQG 448
>gi|300708470|ref|XP_002996413.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
gi|239605714|gb|EEQ82742.1| hypothetical protein NCER_100487 [Nosema ceranae BRL01]
Length = 683
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 22/90 (24%)
Query: 77 FWKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLP---KHF------- 126
W+ ++RM+ AL K +Y+ L N +E+ +L K +
Sbjct: 232 IWRGVCYERMKWALNK-----------LYNMYLRKNTNEMTLYEYLIRGGKEYVNNNIEL 280
Query: 127 -SAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
+ PN+P LN+ Q +VK A+ R ++LIQG
Sbjct: 281 ETVPNMPKLNKFQEISVKAALSRKVTLIQG 310
>gi|407400115|gb|EKF28555.1| regulator of nonsense transcripts 1, putative,nonsense mRNA
reducing factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 839
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 40/78 (51%)
Query: 78 WKSTSFDRMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLPDLNRS 137
+ STS R AL D S+SAY+Y +LG + + + + +LN S
Sbjct: 327 YDSTSDKRKYNALNLMMNDRTSLSAYLYFTILGRAEEAAERFSEVNINLPRERISNLNSS 386
Query: 138 QVYAVKHAIQRPLSLIQG 155
Q AV+ A++ PL+LIQG
Sbjct: 387 QDAAVRTALRNPLTLIQG 404
>gi|392512894|emb|CAD25885.2| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
Length = 776
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 126 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
FS+PNLP LN SQ AV+ A+ R ++LIQG
Sbjct: 331 FSSPNLPKLNASQEVAVRAALGRKVTLIQG 360
>gi|19074775|ref|NP_586281.1| INVOLVED IN mRNA DECAY CONTROL (DNA2/NAM7 HELICASE FAMILY)
[Encephalitozoon cuniculi GB-M1]
gi|449329865|gb|AGE96133.1| mRNA decay control [Encephalitozoon cuniculi]
Length = 782
Score = 39.7 bits (91), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 126 FSAPNLPDLNRSQVYAVKHAIQRPLSLIQG 155
FS+PNLP LN SQ AV+ A+ R ++LIQG
Sbjct: 337 FSSPNLPKLNASQEVAVRAALGRKVTLIQG 366
>gi|72389186|ref|XP_844888.1| regulator of nonsense transcripts 1 [Trypanosoma brucei TREU927]
gi|62359996|gb|AAX80419.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei]
gi|70801422|gb|AAZ11329.1| regulator of nonsense transcripts 1, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 842
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 85 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP----DLNRSQVY 140
R AL++FA + SVSAY+Y +LG H F P +LN SQ
Sbjct: 323 RKMEALQQFARSEGSVSAYLYFTILGQKERAA----HRNSGFDTEPEPRGHHNLNYSQEQ 378
Query: 141 AVKHAIQRPLSLIQG 155
A++ A++ PL+LIQG
Sbjct: 379 ALRVALRNPLTLIQG 393
>gi|261328192|emb|CBH11169.1| nonsense mRNA reducing factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 842
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 8/75 (10%)
Query: 85 RMQLALRKFAVDDQSVSAYIYHRLLGHNVDEVLFRCHLPKHFSAPNLP----DLNRSQVY 140
R AL++FA + SVSAY+Y +LG H F P +LN SQ
Sbjct: 323 RKMEALQQFARSEGSVSAYLYFTILGQKERAA----HRNSGFDTEPEPRGHHNLNYSQEQ 378
Query: 141 AVKHAIQRPLSLIQG 155
A++ A++ PL+LIQG
Sbjct: 379 ALRVALRNPLTLIQG 393
>gi|401827897|ref|XP_003888241.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
gi|392999441|gb|AFM99260.1| superfamily I DNA/RNA helicase [Encephalitozoon hellem ATCC 50504]
Length = 771
Score = 37.0 bits (84), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 38/72 (52%), Gaps = 17/72 (23%)
Query: 89 ALRKFAVDDQSVSAYIYHRLLGH-----NVDEVLFRCHLPKHFSAPNLPDLNRSQVYAVK 143
A +K A + S+ YI L GH NV+ + F +PNLP LN SQ AV+
Sbjct: 293 AAKKSANEGPSIFEYI---LKGHKESIGNVEHI---------FMSPNLPRLNASQETAVR 340
Query: 144 HAIQRPLSLIQG 155
A+ R ++LIQG
Sbjct: 341 AALGRKVTLIQG 352
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.386
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,287,790,414
Number of Sequences: 23463169
Number of extensions: 173090197
Number of successful extensions: 453427
Number of sequences better than 100.0: 409
Number of HSP's better than 100.0 without gapping: 361
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 452387
Number of HSP's gapped (non-prelim): 730
length of query: 266
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 126
effective length of database: 9,074,351,707
effective search space: 1143368315082
effective search space used: 1143368315082
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 75 (33.5 bits)