BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4479
(135 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|307197489|gb|EFN78723.1| Uncharacterized protein C12orf65-like protein [Harpegnathos
saltator]
Length = 165
Score = 148 bits (374), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 97/120 (80%), Gaps = 1/120 (0%)
Query: 15 FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
+++Y LDYS +PK++E D++E+FVRGSGPGGQA KTNN VVL H PTGIV+KCH++RSL
Sbjct: 46 YKRY-LDYSNLPKLEEADLKEQFVRGSGPGGQATNKTNNAVVLKHKPTGIVVKCHETRSL 104
Query: 75 SENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
+N+K ARELLV + D +N E S+ AQIR I +K+RA +E K++KL +KKA++EREG+
Sbjct: 105 WDNQKRARELLVTKLDNLLNKEHSIEAQIRAIQQKQRACKECKRKKLAEMKKAFQEREGL 164
>gi|332373588|gb|AEE61935.1| unknown [Dendroctonus ponderosae]
Length = 138
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 103/138 (74%), Gaps = 5/138 (3%)
Query: 3 IFRR-HLSLASSLFR----KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
+F+R L + S FR K +DYS+VP ++E+D++E+ V+GSGPGGQ V+KT++C+VL
Sbjct: 1 MFQRLRLVVCSVNFRLLSSKKHIDYSQVPALNEQDLEEKQVKGSGPGGQKVSKTSSCIVL 60
Query: 58 THIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
HIPTGIV+KC ++RS+ +N+K AR L+ + D +NGE+S+ AQI+R++ K+R EQK
Sbjct: 61 KHIPTGIVVKCQETRSVLQNKKIARLHLITKLDNTINGENSVEAQIKRLENKKRGCNEQK 120
Query: 118 KRKLDALKKAWKEREGIE 135
+ KL+ LK+ WKE + IE
Sbjct: 121 REKLNQLKQKWKELQNIE 138
>gi|332030644|gb|EGI70332.1| Uncharacterized protein C12orf65-like protein [Acromyrmex
echinatior]
Length = 163
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 66/120 (55%), Positives = 96/120 (80%), Gaps = 1/120 (0%)
Query: 15 FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
F++Y LDYS VPK+DE D++E+F+RGSGPGGQA KTNN V+L H PTG+V+KCH++RS
Sbjct: 44 FKRY-LDYSNVPKLDEIDLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGLVVKCHETRSQ 102
Query: 75 SENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
+N+K ARE+LV + D +N E S+ AQI +++K +A +E K++KL+ +KKA++EREG+
Sbjct: 103 WDNKKRAREILVTKLDNLLNKERSIEAQIHALEKKEQARKEYKRKKLNEMKKAFREREGL 162
>gi|189241033|ref|XP_971712.2| PREDICTED: similar to AGAP012195-PA [Tribolium castaneum]
Length = 132
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 95/126 (75%)
Query: 10 LASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCH 69
L S+ R +DYS+VP++ E +++E+ VRGSGPGGQA KT+NCVVL H+PTG+V+KCH
Sbjct: 7 LIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCH 66
Query: 70 QSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWK 129
++RSL +NRK AR+ LV + D +NG+ S+ AQ+R I++K +E+K+ +L+ LK WK
Sbjct: 67 ETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKKNTLNKERKRERLNKLKAEWK 126
Query: 130 EREGIE 135
+RE IE
Sbjct: 127 KRENIE 132
>gi|270013378|gb|EFA09826.1| hypothetical protein TcasGA2_TC011973 [Tribolium castaneum]
Length = 179
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/126 (51%), Positives = 95/126 (75%)
Query: 10 LASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCH 69
L S+ R +DYS+VP++ E +++E+ VRGSGPGGQA KT+NCVVL H+PTG+V+KCH
Sbjct: 54 LIFSIVRFKHIDYSRVPQLVESELEEQHVRGSGPGGQATNKTSNCVVLKHVPTGLVVKCH 113
Query: 70 QSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWK 129
++RSL +NRK AR+ LV + D +NG+ S+ AQ+R I++K +E+K+ +L+ LK WK
Sbjct: 114 ETRSLDQNRKKARQYLVTKLDNLLNGDQSVEAQMREIEKKNTLNKERKRERLNKLKAEWK 173
Query: 130 EREGIE 135
+RE IE
Sbjct: 174 KRENIE 179
>gi|307170845|gb|EFN62956.1| Uncharacterized protein C12orf65-like protein [Camponotus
floridanus]
Length = 138
Score = 142 bits (359), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 64/118 (54%), Positives = 94/118 (79%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 76
K LDYSKVPK+DE D++E+F+RGSGPGGQA KTNN V L H PTG+V+KCH++RSL +
Sbjct: 20 KRHLDYSKVPKLDEADLEEKFIRGSGPGGQATNKTNNAVSLKHKPTGLVVKCHETRSLWD 79
Query: 77 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
N+K ARE+++ + D +N E S+ AQIR +++K+++ +E K+++L +KKA+ EREG+
Sbjct: 80 NKKRAREIMITKLDNLLNKEYSIEAQIRGLEKKQQSQKENKRKRLTEMKKAFHEREGL 137
>gi|322801028|gb|EFZ21809.1| hypothetical protein SINV_15156 [Solenopsis invicta]
Length = 220
Score = 142 bits (357), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/118 (53%), Positives = 93/118 (78%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 76
K+ LDYS VPK++E D++E+F+RGSGPGGQA KTNN V+L H PTG ++KCH++RS +
Sbjct: 102 KHYLDYSNVPKLNEADLEEQFIRGSGPGGQATNKTNNAVLLKHKPTGFIVKCHETRSQWD 161
Query: 77 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
N+K ARE+L+ + D +N E S+ AQIR ++EK++ +E K++K D +KKA++EREG+
Sbjct: 162 NKKRAREILITKLDNLLNKERSIEAQIRALEEKQQTRKEYKRKKRDEMKKAFREREGL 219
>gi|157131147|ref|XP_001662139.1| hypothetical protein AaeL_AAEL012009 [Aedes aegypti]
gi|157137107|ref|XP_001663890.1| hypothetical protein AaeL_AAEL013711 [Aedes aegypti]
gi|108869799|gb|EAT34024.1| AAEL013711-PA [Aedes aegypti]
gi|108871632|gb|EAT35857.1| AAEL012009-PA [Aedes aegypti]
Length = 142
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/125 (59%), Positives = 92/125 (73%), Gaps = 1/125 (0%)
Query: 9 SLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
S S L R K +D SKVP + + D++E FVRGSGPGGQAVAKTNN VVLTH PTGIVI+
Sbjct: 13 SFRSPLIRWKTTIDTSKVPALRDDDLEETFVRGSGPGGQAVAKTNNKVVLTHKPTGIVIQ 72
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKA 127
CH SRSL +NR+ AR LLVA+ D NG+ S+ AQ RRID+K+ + +++ K +KKA
Sbjct: 73 CHSSRSLFKNREEARRLLVAKLDELENGDQSVEAQQRRIDQKKHSEAARRRSKRQEMKKA 132
Query: 128 WKERE 132
WKERE
Sbjct: 133 WKERE 137
>gi|312370878|gb|EFR19185.1| hypothetical protein AND_22936 [Anopheles darlingi]
Length = 225
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 68/119 (57%), Positives = 92/119 (77%), Gaps = 1/119 (0%)
Query: 14 LFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 73
+F K +D S+VP + E D++E FVRGSGPGGQ+VAKTNN VVLTH PTG+V++CH SRS
Sbjct: 101 MFSK-SIDNSRVPVLQEDDLEESFVRGSGPGGQSVAKTNNKVVLTHKPTGLVVQCHTSRS 159
Query: 74 LSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
L ENR+ AR+LLV + D +NGE S+ AQ +R+D++++ ++K +L A KKAWKERE
Sbjct: 160 LFENRRIARQLLVTKLDQLINGEQSVEAQRQRLDQRKQTEAARRKMRLQAKKKAWKERE 218
>gi|357624655|gb|EHJ75351.1| hypothetical protein KGM_09231 [Danaus plexippus]
Length = 143
Score = 140 bits (352), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/118 (58%), Positives = 92/118 (77%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 76
K+ +D+SKVPKI+E D+ E+FVRGSGPGG AV K +NCVVLTHIPTGIVIKCH SRS E
Sbjct: 25 KHTIDFSKVPKINECDLTEQFVRGSGPGGSAVNKNSNCVVLTHIPTGIVIKCHTSRSQDE 84
Query: 77 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
NRK AR++L+A+ D +NG++S+ +Q + I+E R E KK+K +K+ WK+REG+
Sbjct: 85 NRKMARDMLIAKLDDIINGKNSVESQKKMIEENRFKKVEYKKKKRAEIKEKWKKREGL 142
>gi|193599082|ref|XP_001946758.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like isoform 1 [Acyrthosiphon pisum]
gi|328703300|ref|XP_003242163.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Acyrthosiphon pisum]
gi|328703303|ref|XP_003242164.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Acyrthosiphon pisum]
Length = 150
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/126 (54%), Positives = 91/126 (72%), Gaps = 1/126 (0%)
Query: 9 SLASSLF-RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
S++ +LF +K +D SKVP I+E +++E FV+GSGPGG AV K NCVVL H PTGIVIK
Sbjct: 21 SISLTLFNKKQTIDRSKVPIINENELEEMFVKGSGPGGSAVNKNANCVVLKHKPTGIVIK 80
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKA 127
CH+SR + +NRK ARE L + DV NG +S+ AQ + I EK+ A +E K++KL+ LKK
Sbjct: 81 CHESRCVEDNRKMAREKLAIKLDVIENGNNSVEAQKKAIIEKKNAQKEWKRKKLETLKKD 140
Query: 128 WKEREG 133
W ERE
Sbjct: 141 WIERES 146
>gi|195334889|ref|XP_002034109.1| GM21684 [Drosophila sechellia]
gi|194126079|gb|EDW48122.1| GM21684 [Drosophila sechellia]
Length = 146
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 62/133 (46%), Positives = 92/133 (69%), Gaps = 1/133 (0%)
Query: 1 MSIFRRHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
+ + R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H
Sbjct: 2 LRVLVRFLALPPPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRH 61
Query: 60 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 119
+PT I +KCH R S+NR AR+LL+ + DV +NGE S+ AQI+ ++++ + +++
Sbjct: 62 LPTNITVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQE 121
Query: 120 KLDALKKAWKERE 132
KL +KK+W++RE
Sbjct: 122 KLQEMKKSWQDRE 134
>gi|195121186|ref|XP_002005101.1| GI19248 [Drosophila mojavensis]
gi|193910169|gb|EDW09036.1| GI19248 [Drosophila mojavensis]
Length = 141
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 63/127 (49%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 9 SLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
SL+S+L R LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PTGI
Sbjct: 10 SLSSNLCRLASNAHLDYSRYPTLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGIT 69
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
+KCH R S+NR AR++L+ + DV +NGE S+ AQ + +D+K+ +++++ KL +K
Sbjct: 70 VKCHLHRLASKNRIEARKILLEKLDVHLNGEKSIAAQQKALDQKKSTERKRRQGKLQEMK 129
Query: 126 KAWKERE 132
K W+ RE
Sbjct: 130 KNWQNRE 136
>gi|195558953|ref|XP_002077323.1| GD20369 [Drosophila simulans]
gi|194202425|gb|EDX16001.1| GD20369 [Drosophila simulans]
Length = 146
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 62/128 (48%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I
Sbjct: 7 RFLALPPPSVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNI 66
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+KCH R S+NR AR+LL+ + DV +NGE S+ AQI+ ++++ + +++ KL +
Sbjct: 67 TVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIAAQIKAQEQRKSTERRRRQEKLQEM 126
Query: 125 KKAWKERE 132
KK+W++RE
Sbjct: 127 KKSWQDRE 134
>gi|24654113|ref|NP_725560.1| CG30100 [Drosophila melanogaster]
gi|21627121|gb|AAM68513.1| CG30100 [Drosophila melanogaster]
gi|157816290|gb|ABV82139.1| AT22563p2 [Drosophila melanogaster]
Length = 146
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 91/128 (71%), Gaps = 1/128 (0%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R L+L + R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I
Sbjct: 7 RFLALPPTAVRCKSNLDYSRFPVLQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNI 66
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+KCH R S+NR AR+LL+ + DV +NGE S+ AQ++ ++++ + +++ KL +
Sbjct: 67 TVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQEKLQEM 126
Query: 125 KKAWKERE 132
KK+W++RE
Sbjct: 127 KKSWQDRE 134
>gi|195488245|ref|XP_002092233.1| GE11778 [Drosophila yakuba]
gi|194178334|gb|EDW91945.1| GE11778 [Drosophila yakuba]
Length = 146
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 90/128 (70%), Gaps = 1/128 (0%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I
Sbjct: 7 RFLALPQPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNI 66
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+KCH R S+NR AR+LL+ + DV +NGE S+ AQ++ ++++ + +++ KL +
Sbjct: 67 TVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIAAQVKAQEQRKSTERRRRQEKLQEM 126
Query: 125 KKAWKERE 132
KK+W++RE
Sbjct: 127 KKSWQDRE 134
>gi|170049046|ref|XP_001853980.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167870988|gb|EDS34371.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 142
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 87/116 (75%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 76
K +D SKVP + ++D++E FVRGSGPGGQ+VAKTNN VVLTH PTGIVI+CH SRSL +
Sbjct: 22 KTTIDVSKVPVLRDEDLEEAFVRGSGPGGQSVAKTNNKVVLTHKPTGIVIQCHSSRSLFK 81
Query: 77 NRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
NR+ AR LL+ + D NG+ S+ AQ ++I+ K+ + ++K K LK++WK+RE
Sbjct: 82 NREEARRLLILKLDELENGDQSVEAQRQKIEAKKHSETTRRKMKRQELKRSWKDRE 137
>gi|350412608|ref|XP_003489703.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Bombus impatiens]
Length = 172
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 67/123 (54%), Positives = 90/123 (73%), Gaps = 2/123 (1%)
Query: 15 FRKYD--LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 72
++ Y+ LDYSKVP+++E D+QE+ VRGSGPGGQA KTNN V+L H PTG+VIKCHQ+R
Sbjct: 50 YKSYNRFLDYSKVPRLEENDLQEQHVRGSGPGGQATNKTNNAVILKHKPTGLVIKCHQTR 109
Query: 73 SLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
SL +NR ARE+L+ + D VNG DSL +Q R+ +K + QKK+KL LK + ERE
Sbjct: 110 SLEQNRNIAREILLRKLDNLVNGLDSLESQQERLMKKDSIKKRQKKKKLADLKNKFMERE 169
Query: 133 GIE 135
++
Sbjct: 170 NLK 172
>gi|194757281|ref|XP_001960893.1| GF13589 [Drosophila ananassae]
gi|190622191|gb|EDV37715.1| GF13589 [Drosophila ananassae]
Length = 141
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 62/114 (54%), Positives = 85/114 (74%), Gaps = 2/114 (1%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
LDYS+ P + E DI+E F RGSGPGGQAV KT+NCV L H+PT I IKCH R S+NR
Sbjct: 24 LDYSRYPTLQESDIEETFTRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNRV 83
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR-KLDALKKAWKERE 132
AR+LL+ + D +NGE+S+ AQI ++ E+R++T+ ++++ KL LKK W+ERE
Sbjct: 84 EARKLLLEKLDAHLNGENSIAAQI-KVQEQRKSTERRRRQNKLQELKKNWQERE 136
>gi|195029889|ref|XP_001987804.1| GH22113 [Drosophila grimshawi]
gi|193903804|gb|EDW02671.1| GH22113 [Drosophila grimshawi]
Length = 148
Score = 129 bits (323), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 88/128 (68%), Gaps = 5/128 (3%)
Query: 10 LASSLFRKY-----DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
L+SSL + LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PTG+
Sbjct: 11 LSSSLCHRLASNNAHLDYSRYPSLQESDIEETLMRGSGPGGQAVNKTNNCVFLRHLPTGL 70
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+KCH R S+NR AR++L+ + D +NGE S+ AQ++ D+K+ + +++++ KL +
Sbjct: 71 TVKCHLHRLASKNRIEARKILLDKLDAHLNGEQSIAAQLKVFDQKKSSERKRRQGKLQEM 130
Query: 125 KKAWKERE 132
KK W+ RE
Sbjct: 131 KKMWQSRE 138
>gi|195382982|ref|XP_002050205.1| GJ20325 [Drosophila virilis]
gi|195404316|ref|XP_002060447.1| GJ15534 [Drosophila virilis]
gi|194145002|gb|EDW61398.1| GJ20325 [Drosophila virilis]
gi|194156312|gb|EDW71496.1| GJ15534 [Drosophila virilis]
Length = 142
Score = 128 bits (322), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 61/127 (48%), Positives = 89/127 (70%), Gaps = 3/127 (2%)
Query: 9 SLASSLFR---KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
+L+S+L R LDYS+ P + E DI+E +RGSGPGGQAV KTNNCV L H+PTGI
Sbjct: 10 ALSSNLCRLASTAHLDYSRYPSLQESDIEETLLRGSGPGGQAVNKTNNCVFLRHLPTGIT 69
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
+KCH R S+NR AR++L+ + D +NGE S+ AQ + +D+K+ + +++++ KL +K
Sbjct: 70 VKCHLHRLASKNRIEARKILLDKLDAHLNGEQSIAAQQKVLDQKKSSERKRRQGKLQEMK 129
Query: 126 KAWKERE 132
K W+ RE
Sbjct: 130 KTWQSRE 136
>gi|195150095|ref|XP_002015990.1| GL10726 [Drosophila persimilis]
gi|194109837|gb|EDW31880.1| GL10726 [Drosophila persimilis]
Length = 181
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 84/117 (71%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
+LDYS+ PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT I IKCH R S+NR
Sbjct: 60 NLDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNR 119
Query: 79 KTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
AR+LL+ + D NGE+S+ AQI+ +++++ + +++ K+ +K W+ERE E
Sbjct: 120 VEARKLLLDKLDAHFNGENSIAAQIKVLEQRKSTERRRRQGKMQEMKTRWQERERTE 176
>gi|332375198|gb|AEE62740.1| unknown [Dendroctonus ponderosae]
Length = 139
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 90/133 (67%), Gaps = 5/133 (3%)
Query: 8 LSLASSLFRKYD-----LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
LS S+ R Y +D + P +DE D++E+ +RGSGPGG ++ T +CV+L HIPT
Sbjct: 7 LSYTRSIVRWYSSMRKQIDLTCFPTLDECDLEEQHIRGSGPGGSKISTTCSCVLLKHIPT 66
Query: 63 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
G+V+KC ++R L +NRK AR L+ + D+ +NGE+S+ AQ R+ R+A+ +QKK K+
Sbjct: 67 GLVVKCQETRFLEQNRKRARLNLLTKLDIHLNGENSVQAQTARLQANRKASMDQKKEKIR 126
Query: 123 ALKKAWKEREGIE 135
LK+ WKERE I+
Sbjct: 127 ELKRMWKERENID 139
>gi|194882555|ref|XP_001975376.1| GG20592 [Drosophila erecta]
gi|190658563|gb|EDV55776.1| GG20592 [Drosophila erecta]
Length = 148
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 89/128 (69%), Gaps = 1/128 (0%)
Query: 6 RHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R L+L R K +LDYS+ P + E DI+E F+RGSGPGGQAV KT+NCV L H+PT I
Sbjct: 7 RFLALPPPAVRCKSNLDYSRFPALQESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNI 66
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+KCH R S+NR AR+LL+ + DV +NGE S+ Q++ ++++ + +++ KL +
Sbjct: 67 TVKCHTHRLASKNRVEARKLLLEKLDVHLNGEHSIATQVKAQEQRKSTERRRRQEKLLEM 126
Query: 125 KKAWKERE 132
KK+W++RE
Sbjct: 127 KKSWQDRE 134
>gi|198456857|ref|XP_001360468.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
gi|198135777|gb|EAL25043.2| GA15649 [Drosophila pseudoobscura pseudoobscura]
Length = 181
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 83/117 (70%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
+LDYS+ PK+ E +I+E F+RGSGPGGQAV KT+NCV L H+PT I IKCH R S+NR
Sbjct: 60 NLDYSRYPKLQESEIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNITIKCHTHRLASKNR 119
Query: 79 KTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
AR+LL+ + D NGE+S+ AQI+ ++ ++ + +++ K+ +K W+ERE E
Sbjct: 120 VEARKLLLDKLDAHFNGENSIAAQIKVLEHRKSTERRRRQGKMQEMKTRWQERERTE 176
>gi|224924358|gb|ACN69129.1| mitochondrial polypeptide chain release factor [Stomoxys
calcitrans]
Length = 183
Score = 125 bits (314), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 89/123 (72%), Gaps = 3/123 (2%)
Query: 10 LASSLFRKY---DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVI 66
+S LF + LDYS+ P ++E+D++E F RGSGPGGQA+ KT+NCV+L H+PT IV+
Sbjct: 41 FSSLLFYRLKHQQLDYSRYPTLNEEDLEETFTRGSGPGGQALNKTSNCVLLRHLPTNIVV 100
Query: 67 KCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 126
KCH RS +NR AR++L+ + D Q+NGE S+ +Q+++++ K+ A ++++ KL +K+
Sbjct: 101 KCHIHRSAQKNRVEARKILLEKLDAQLNGEYSIQSQLKQLENKKSAERKRRXTKLQEMKQ 160
Query: 127 AWK 129
WK
Sbjct: 161 KWK 163
>gi|346474116|gb|AEO36902.1| hypothetical protein [Amblyomma maculatum]
Length = 163
Score = 125 bits (314), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 59/115 (51%), Positives = 85/115 (73%)
Query: 18 YDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+ +D SKVP ++E+D+ E+FV GSGPGGQAV K +NCVVL H PTGIV++CH++R L EN
Sbjct: 37 HSIDRSKVPVLNEEDLVEQFVHGSGPGGQAVNKLSNCVVLCHTPTGIVVRCHEARLLHEN 96
Query: 78 RKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
RK AR++L+ + D +NG+ S+ AQ RI +++R ++K KL LKK + ER+
Sbjct: 97 RKLARKMLLEKLDDHINGDMSVAAQKLRIKKEKRRKLDRKNEKLRELKKQFMERQ 151
>gi|380018586|ref|XP_003693208.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Apis florea]
Length = 148
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 61/116 (52%), Positives = 91/116 (78%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
LDYS+VPK++E D+QE+FV+GSGPGGQA KT+N +VL H PTG+V+KCH++RSL +NRK
Sbjct: 33 LDYSRVPKLEESDLQEQFVKGSGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRK 92
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
AR++L+ + D VNG++SL Q ++ ++ ++QKK+KL+ LK A+ ERE ++
Sbjct: 93 IARKILLTRLDNLVNGQNSLQNQKEQLMKRDSIKKKQKKKKLEDLKNAFVERENLK 148
>gi|118792472|ref|XP_320337.3| AGAP012195-PA [Anopheles gambiae str. PEST]
gi|116116915|gb|EAA00473.4| AGAP012195-PA [Anopheles gambiae str. PEST]
Length = 151
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 64/113 (56%), Positives = 91/113 (80%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
+D+S++P + ++D++E FVRGSGPGGQAVAKTNN VVLTH PTGIV++CH +RSL ENR+
Sbjct: 32 VDHSRLPVLRDEDLEESFVRGSGPGGQAVAKTNNKVVLTHKPTGIVVQCHTTRSLFENRR 91
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
AR++L+ + D NG+ S+ AQ++RI+ K++ ++K+KL A KKAWKERE
Sbjct: 92 EARKMLIGKLDQLYNGDQSVEAQLQRIEAKKQTETARRKQKLQAKKKAWKERE 144
>gi|427783107|gb|JAA57005.1| Putative translational termination [Rhipicephalus pulchellus]
Length = 163
Score = 122 bits (306), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/115 (50%), Positives = 84/115 (73%)
Query: 18 YDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+ +D SKVP + E+D+ E+F+ GSGPGGQAV K +NCV+L H PTGIV++CH+SR L EN
Sbjct: 38 HRIDRSKVPVLKEEDVVEQFIHGSGPGGQAVNKLSNCVMLCHTPTGIVVRCHESRLLHEN 97
Query: 78 RKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
RK AR++LV + D +NG+ S++AQ RI + +R ++K KL LK+ + ER+
Sbjct: 98 RKLARKMLVEKLDEHLNGDMSVSAQKLRIKQDKRRKLDRKNEKLRELKRQFLERQ 152
>gi|156552109|ref|XP_001605206.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Nasonia vitripennis]
Length = 159
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 52/111 (46%), Positives = 86/111 (77%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
+D SKVPKI+E D++ ++VRGSGPGGQ+ KT+N VV+ H+PTG+VIKCH++RS ++N K
Sbjct: 37 IDTSKVPKINEDDLEIQYVRGSGPGGQSTNKTSNNVVMKHLPTGLVIKCHETRSQTQNLK 96
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
A+E L+ + D+ NGED++ Q +++ K+ + ++++++K ALK ++KE
Sbjct: 97 IAKEKLINKLDLLYNGEDAVENQKKKLLAKKTSEKQRRQKKRAALKASFKE 147
>gi|383847184|ref|XP_003699235.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Megachile rotundata]
Length = 162
Score = 114 bits (286), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 88/116 (75%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
LDY+ VPK++E D++E+FV+GSGPGGQA KT+N VV+ H PTG+ +KCH++RSL +NRK
Sbjct: 47 LDYTNVPKLEESDLEEQFVKGSGPGGQATNKTSNAVVIKHKPTGLTVKCHETRSLDKNRK 106
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
ARELL+ + D +NGE SL Q ++ +K ++QK++KL LK+ +++RE I+
Sbjct: 107 IARELLLTKLDNLINGERSLQNQELQLQQKDSLKRKQKQKKLARLKEEFQKRENIK 162
>gi|195426674|ref|XP_002061432.1| GK20726 [Drosophila willistoni]
gi|194157517|gb|EDW72418.1| GK20726 [Drosophila willistoni]
Length = 167
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 52/103 (50%), Positives = 76/103 (73%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E DI+E F+RGSGPGGQAV KT+NCV L H+PT + IKCH R S+NR AR+LL+ +
Sbjct: 57 ESDIEETFMRGSGPGGQAVNKTSNCVFLRHLPTNLTIKCHTHRLASKNRIEARKLLLEKL 116
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
D +NGE+S+ AQI+ ++++ +++++ KL +KK W+ERE
Sbjct: 117 DEHLNGENSIAAQIKGQEQRKSLERKRRQNKLQEMKKKWQERE 159
>gi|328791281|ref|XP_003251540.1| PREDICTED: peptide chain release factor 2-like [Apis mellifera]
Length = 178
Score = 113 bits (283), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 59/116 (50%), Positives = 88/116 (75%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
LDYS+VPK++E D+QE+FV+G GPGGQA KT+N +VL H PTG+V+KCH++RSL +NRK
Sbjct: 63 LDYSRVPKLEESDLQEQFVKGCGPGGQATNKTSNAIVLKHKPTGLVVKCHETRSLDQNRK 122
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
AR++L+ + D VN ++SL Q ++ ++ ++QKK+KL LK A+ ERE ++
Sbjct: 123 IARKILLTRLDNLVNDQNSLQNQKEQLMKRDSIKKKQKKKKLQDLKNAFVERENLK 178
>gi|440898325|gb|ELR49850.1| hypothetical protein M91_19035, partial [Bos grunniens mutus]
Length = 165
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 126
+ DV NGE+SL + +R EKR+ QE+KKR + L+K
Sbjct: 115 KVDVFYNGENSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|61886963|ref|XP_584238.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|297484729|ref|XP_002694521.1| PREDICTED: uncharacterized protein LOC507595 [Bos taurus]
gi|296478551|tpg|DAA20666.1| TPA: chromosome 12 open reading frame 65 ortholog [Bos taurus]
Length = 172
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 77/99 (77%), Gaps = 2/99 (2%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 126
+ DV NGE+SL + +R EKR+ QE+KKR + L+K
Sbjct: 115 KVDVFYNGENSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|391344326|ref|XP_003746452.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Metaseiulus occidentalis]
Length = 207
Score = 110 bits (274), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/98 (54%), Positives = 73/98 (74%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
+D S+VP I E+DI E+FV+GSGPGGQ+V KT NCVVL H PTG+V++CH+SR +NR+
Sbjct: 65 VDKSRVPVIGEEDIIEQFVKGSGPGGQSVNKTVNCVVLCHRPTGVVVRCHESRLQHQNRR 124
Query: 80 TARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
AR+LLV + D +NGE S+ Q RI+ +R+ EQ+
Sbjct: 125 MARQLLVEKVDDFINGEMSVRNQKIRIERERKIKAEQR 162
>gi|194042870|ref|XP_001928322.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Sus scrofa]
Length = 202
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 76/99 (76%), Gaps = 2/99 (2%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE++++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHIPSGIVVKCHQTRSVDQNRKLARRILQE 114
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 126
+ DV NGE+S + +R EKR+ QE+KKR + L+K
Sbjct: 115 KVDVFYNGENSPVYKEKREAEKRK--QERKKRAKETLEK 151
>gi|355735813|gb|AES11793.1| hypothetical protein [Mustela putorius furo]
Length = 153
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/99 (51%), Positives = 75/99 (75%), Gaps = 2/99 (2%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D +P ++E+D++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 36 DRPALPPLEERDLEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKL 95
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 119
AR++L + D+ NGE+SL + ++ E R QE+KKR
Sbjct: 96 ARKILQEKLDIFYNGENSLVYKEKQ--EAERKKQERKKR 132
>gi|426247198|ref|XP_004017373.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Ovis aries]
Length = 177
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 53/106 (50%), Positives = 78/106 (73%), Gaps = 2/106 (1%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DCPTLLSLNEHELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKK 126
AR +L + DV NG++SL + +R EKR+ QE+KKR + L+K
Sbjct: 108 ARRILQEKVDVFYNGKNSLVCREKREAEKRK--QERKKRAKETLEK 151
>gi|449476622|ref|XP_002189696.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Taeniopygia guttata]
Length = 162
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/110 (51%), Positives = 79/110 (71%), Gaps = 4/110 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D++E+FVRG GPGGQA KTNNCVVL HIP+GIV+KCHQ+RSL +NRK ARE+L
Sbjct: 53 ISEADLEEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSLEKNRKIAREILQE 112
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL--KKAWKEREGIE 135
+ + GEDS + ++ EK++ QE+K+R + L KK +KE + ++
Sbjct: 113 KVYLFYKGEDSDVFKEKKASEKQK--QEKKRRAKENLERKKLFKEMQQLD 160
>gi|410923066|ref|XP_003975003.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Takifugu rubripes]
Length = 167
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 53/127 (41%), Positives = 82/127 (64%), Gaps = 6/127 (4%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
+ + R H S LF +P ++E D++E+FVRGSGPGGQA KT+NCVVL HI
Sbjct: 24 LLLLRPHPSGLPCLFAASKKGLIDLPILNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHI 83
Query: 61 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQ 114
P+G+V+KCHQ+RS+ NRK ARE++ + DV GE S +++R+ D++R+ +
Sbjct: 84 PSGVVVKCHQTRSVDINRKRAREIMKEKLDVLQKGELSEVILKKKESELRKQDKRRKVNE 143
Query: 115 EQKKRKL 121
++++L
Sbjct: 144 NLERKRL 150
>gi|344297379|ref|XP_003420376.1| PREDICTED: hypothetical protein LOC100663086 [Loxodonta africana]
Length = 377
Score = 105 bits (261), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 62/75 (82%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR++
Sbjct: 263 LPALDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKI 322
Query: 85 LVAQWDVQVNGEDSL 99
L + DV NGE+SL
Sbjct: 323 LQEKVDVFCNGENSL 337
>gi|55639161|ref|XP_509459.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pan troglodytes]
gi|114647627|ref|XP_001169334.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Pan troglodytes]
gi|114647631|ref|XP_001169383.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pan troglodytes]
gi|332840720|ref|XP_003314049.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|332840723|ref|XP_003314050.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|410047478|ref|XP_003952395.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Pan troglodytes]
gi|410206856|gb|JAA00647.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410206858|gb|JAA00648.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253958|gb|JAA14946.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253960|gb|JAA14947.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253962|gb|JAA14948.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410253964|gb|JAA14949.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291932|gb|JAA24566.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291934|gb|JAA24567.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291936|gb|JAA24568.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410291938|gb|JAA24569.1| chromosome 12 open reading frame 65 [Pan troglodytes]
gi|410336993|gb|JAA37443.1| chromosome 12 open reading frame 65 [Pan troglodytes]
Length = 166
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 50/100 (50%), Positives = 75/100 (75%), Gaps = 5/100 (5%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
AR++L + DV NGE N+ + + EK+ A +++++RK
Sbjct: 108 ARKILQEKVDVFYNGE---NSPVHK--EKQEAVKKKQERK 142
>gi|213514146|ref|NP_001134302.1| CL065 protein [Salmo salar]
gi|209732210|gb|ACI66974.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 81/117 (69%), Gaps = 8/117 (6%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK
Sbjct: 44 DYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKR 103
Query: 81 ARELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL--DALKKAWK 129
AR+++ + +V GE+S + R+ D++++A + +K++L +AL +K
Sbjct: 104 ARQIMREKLEVTYKGEESDILKNKKESIQRKQDKRKKANENLEKKRLFKEALMTDYK 160
>gi|73995153|ref|XP_543374.2| PREDICTED: uncharacterized protein LOC486249 [Canis lupus
familiaris]
Length = 440
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D +P +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 322 DRPALPLLDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 381
Query: 81 ARELLVAQWDVQVNGEDSL 99
AR++L + D+ NGE+S+
Sbjct: 382 ARQILQEKVDIFYNGENSI 400
>gi|402888030|ref|XP_003907380.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Papio anubis]
gi|402888032|ref|XP_003907381.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Papio anubis]
gi|402888034|ref|XP_003907382.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Papio anubis]
gi|402888036|ref|XP_003907383.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Papio anubis]
Length = 169
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 51 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 110
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 111 ARKILQEKVDVFYNGENS 128
>gi|410976508|ref|XP_003994662.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Felis catus]
Length = 167
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/75 (60%), Positives = 61/75 (81%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P +DE D++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR +
Sbjct: 53 LPPLDESDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARII 112
Query: 85 LVAQWDVQVNGEDSL 99
L + D+ NGE+SL
Sbjct: 113 LQEKVDIFYNGENSL 127
>gi|395513828|ref|XP_003761124.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Sarcophilus harrisii]
Length = 185
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 58/71 (81%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++E+FV+G GPGGQA KTNNCVVL HIPTGIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 53 LNETDLEEQFVKGHGPGGQATNKTNNCVVLKHIPTGIVVKCHQTRSVDQNRKLAREILQG 112
Query: 88 QWDVQVNGEDS 98
+ D+ GEDS
Sbjct: 113 KVDLFYRGEDS 123
>gi|348528334|ref|XP_003451673.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Oreochromis niloticus]
Length = 162
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 69/105 (65%), Gaps = 5/105 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D +P + E +++E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK
Sbjct: 40 DLIDLPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGIVVKCHQTRSVDINRKR 99
Query: 81 ARELLVAQWDVQVNGEDS-----LNAQIRRIDEKRRATQEQKKRK 120
ARE++ + DV GE S + R EKRR E +RK
Sbjct: 100 AREIMREKLDVAYKGELSEVVTKKKESVLRKQEKRRKANENLERK 144
>gi|395846771|ref|XP_003796067.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Otolemur garnettii]
Length = 183
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 61/78 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D + +DE D++E+FV+G GPGGQA KTNNCVVL HIP+GIVIKCHQ+RS+ +NRK
Sbjct: 48 DCPALLSLDENDLKEQFVKGHGPGGQATNKTNNCVVLKHIPSGIVIKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + D+ NGE+S
Sbjct: 108 ARKILQEKVDIFYNGENS 125
>gi|355564798|gb|EHH21298.1| hypothetical protein EGK_04319, partial [Macaca mulatta]
gi|355786636|gb|EHH66819.1| hypothetical protein EGM_03875, partial [Macaca fascicularis]
Length = 165
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 47 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 106
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 107 ARKILQEKVDVFYNGENS 124
>gi|209736218|gb|ACI68978.1| C12orf65 homolog [Salmo salar]
Length = 166
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 53/117 (45%), Positives = 80/117 (68%), Gaps = 8/117 (6%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK
Sbjct: 44 DYIDLPVLNEDELDEQFVRGSGPGGQATNKTSNCVVLRHIPTGIVVKCHQTRSVETNRKR 103
Query: 81 ARELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL--DALKKAWK 129
AR ++ + +V GE+S + R+ D++++A + +K++L +AL +K
Sbjct: 104 ARRIMREKLEVTYKGEESDILKNKKESIQRKQDKRKKANENLEKKRLFKEALMTDYK 160
>gi|397481889|ref|XP_003812169.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Pan paniscus]
gi|397481891|ref|XP_003812170.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Pan paniscus]
gi|397481893|ref|XP_003812171.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pan paniscus]
gi|397481895|ref|XP_003812172.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Pan paniscus]
gi|397481897|ref|XP_003812173.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pan paniscus]
gi|426374551|ref|XP_004054135.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Gorilla gorilla gorilla]
gi|426374553|ref|XP_004054136.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Gorilla gorilla gorilla]
gi|426374555|ref|XP_004054137.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Gorilla gorilla gorilla]
gi|426374557|ref|XP_004054138.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Gorilla gorilla gorilla]
gi|426374559|ref|XP_004054139.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Gorilla gorilla gorilla]
gi|426374561|ref|XP_004054140.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 6 [Gorilla gorilla gorilla]
Length = 166
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|332254315|ref|XP_003276272.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 1 [Nomascus leucogenys]
gi|332254317|ref|XP_003276273.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 2 [Nomascus leucogenys]
gi|332254319|ref|XP_003276274.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Nomascus leucogenys]
gi|332254321|ref|XP_003276275.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 4 [Nomascus leucogenys]
gi|441630234|ref|XP_004089518.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Nomascus leucogenys]
gi|441630241|ref|XP_004089519.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Nomascus leucogenys]
Length = 166
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|22748627|ref|NP_689482.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|219879802|ref|NP_001137377.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|303304971|ref|NP_001181924.1| probable peptide chain release factor C12orf65, mitochondrial [Homo
sapiens]
gi|74733574|sp|Q9H3J6.1|CL065_HUMAN RecName: Full=Probable peptide chain release factor C12orf65,
mitochondrial; Flags: Precursor
gi|12002002|gb|AAG43144.1|AF061733_1 My030 protein [Homo sapiens]
gi|17390320|gb|AAH18145.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|21755354|dbj|BAC04665.1| unnamed protein product [Homo sapiens]
gi|38382804|gb|AAH62329.1| Chromosome 12 open reading frame 65 [Homo sapiens]
gi|119618802|gb|EAW98396.1| hypothetical protein FLJ38663, isoform CRA_b [Homo sapiens]
gi|312152346|gb|ADQ32685.1| chromosome 12 open reading frame 65 [synthetic construct]
Length = 166
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|405957865|gb|EKC24043.1| Uncharacterized protein C12orf65-like protein [Crassostrea gigas]
Length = 372
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 68/87 (78%), Gaps = 2/87 (2%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
K P+I E+D++E V+GSGPGGQ+V KT+NCVVL H P+GIV+KCH +RSL++NR+ ARE
Sbjct: 48 KFPEILERDLEESIVKGSGPGGQSVNKTSNCVVLLHKPSGIVVKCHHTRSLAKNREIARE 107
Query: 84 LLVAQWDVQVNGEDSLNAQIRRIDEKR 110
LL + D +NG++S AQ+ + EKR
Sbjct: 108 LLQEKLDESINGKNSYLAQV--MQEKR 132
>gi|403281775|ref|XP_003932353.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Saimiri boliviensis boliviensis]
Length = 170
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|297693340|ref|XP_002823976.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 3 [Pongo abelii]
gi|297693344|ref|XP_002823978.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform 5 [Pongo abelii]
Length = 166
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/78 (57%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLYLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|296213216|ref|XP_002753183.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial [Callithrix jacchus]
Length = 170
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + D+ NGE+S
Sbjct: 108 ARKILQEKVDIFYNGENS 125
>gi|291414256|ref|XP_002723382.1| PREDICTED: hypothetical protein [Oryctolagus cuniculus]
Length = 165
Score = 102 bits (254), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/79 (54%), Positives = 63/79 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
++ +P +DE +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 48 EWPPLPPLDENELREQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDSL 99
AR +L + DV +GE+SL
Sbjct: 108 ARRILQEKVDVFYHGENSL 126
>gi|291239031|ref|XP_002739431.1| PREDICTED: C12orf65 homolog [Saccoglossus kowalevskii]
Length = 160
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 51/107 (47%), Positives = 75/107 (70%), Gaps = 4/107 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I+E ++ E+FVRGSGPGGQA KT+NCVVL HIP+GI +KCHQ+RS S+NR+ +R +L
Sbjct: 51 INEDELDEQFVRGSGPGGQATNKTSNCVVLKHIPSGITVKCHQTRSQSKNRELSRRILRE 110
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR----KLDALKKAWKE 130
+ DV G++S+ ++ +EKRR +++K + KL A K + E
Sbjct: 111 KLDVFYKGDESIIVIEKKKEEKRRQEKKRKSKVRLEKLKAFKASLNE 157
>gi|354496365|ref|XP_003510297.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Cricetulus griseus]
Length = 180
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + + E +++E+FV+G GPGGQA KTNNCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 47 DYPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPSGIVVKCHQTRSVDQNRKI 106
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 107 ARKILQEKVDVFYNGENS 124
>gi|351698556|gb|EHB01475.1| hypothetical protein GW7_03140 [Heterocephalus glaber]
Length = 186
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D++ + +DE +++E+FV+G GPGGQA KT+NCVVL H+P+G+V+KCHQ+RS+ NRK
Sbjct: 51 DHTSLLPLDESELEEQFVKGHGPGGQATNKTSNCVVLKHLPSGLVVKCHQTRSVDHNRKL 110
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGEDS
Sbjct: 111 ARKILQEKVDVFYNGEDS 128
>gi|149063270|gb|EDM13593.1| rCG21417, isoform CRA_a [Rattus norvegicus]
Length = 220
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 87 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKM 146
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 147 ARKILQEKVDVFYNGENS 164
>gi|334327146|ref|XP_001375022.2| PREDICTED: probable peptide chain release factor C12orf65
homolog, mitochondrial-like [Monodelphis domestica]
Length = 138
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 61/78 (78%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D + ++E+D++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK
Sbjct: 13 DAHNLLPLNERDLEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKL 72
Query: 81 ARELLVAQWDVQVNGEDS 98
ARE+L + D+ GEDS
Sbjct: 73 AREILQGKVDLFYRGEDS 90
>gi|197927088|ref|NP_001102535.2| uncharacterized protein LOC498179 [Rattus norvegicus]
gi|392352516|ref|XP_003751231.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Rattus norvegicus]
gi|195539878|gb|AAI68187.1| RGD1563482 protein [Rattus norvegicus]
Length = 181
Score = 102 bits (253), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKM 107
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 108 ARKILQEKVDVFYNGENS 125
>gi|390353656|ref|XP_798467.3| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 223
Score = 101 bits (252), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/80 (56%), Positives = 63/80 (78%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 82
SK+P + E++++E+FVRGSGPGGQA KT+NCVVL HIPTG+V+KCHQ+RS SEN+K AR
Sbjct: 94 SKLPDLKEEELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGLVVKCHQTRSQSENQKIAR 153
Query: 83 ELLVAQWDVQVNGEDSLNAQ 102
L+ + D ++ + S +Q
Sbjct: 154 LLMKERLDQHLHADQSAISQ 173
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 25/29 (86%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKT 51
SK+P + E++++E+FVRGSGPGGQA KT
Sbjct: 38 SKLPDLKEEELEEQFVRGSGPGGQATNKT 66
>gi|187607772|ref|NP_001119948.1| uncharacterized protein LOC100004874 [Danio rerio]
gi|162416112|sp|A5WUX7.1|CL065_DANRE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
Length = 156
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKC 68
S+ + +KY ++ +P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KC
Sbjct: 26 SVLPAAGKKYQIE---LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKC 82
Query: 69 HQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
H++RS+ NRK ARE+L + +V GE+S ++ ++ ++ ++ K+RK++
Sbjct: 83 HETRSVDLNRKRAREILREKLEVAYKGEES---ELLKMKKESMQKKQDKRRKVN 133
>gi|189519733|ref|XP_001340041.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial [Danio rerio]
Length = 156
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 82/114 (71%), Gaps = 6/114 (5%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKC 68
S+ + +KY ++ +P + E++++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KC
Sbjct: 26 SVLPAAGKKYQIE---LPVVHEEELEEQFVRGSGPGGQATNKTSNCVVLRHIPSGIVVKC 82
Query: 69 HQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
H++RS+ NRK ARE+L + +V GE+S ++ ++ ++ ++ K+RK++
Sbjct: 83 HETRSVDLNRKRAREILREKLEVAYKGEES---ELLKMKKESMQKKQDKRRKVN 133
>gi|432873961|ref|XP_004072403.1| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like [Oryzias latipes]
Length = 168
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 59/78 (75%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D + P + E +++E+FVRGSGPGGQA KT+NCVVL HIPTGIV+KCHQ+RS+ NRK
Sbjct: 45 DLTDFPVLVEDELEEQFVRGSGPGGQATNKTSNCVVLKHIPTGIVVKCHQTRSVDINRKR 104
Query: 81 ARELLVAQWDVQVNGEDS 98
ARE++ + DV GE S
Sbjct: 105 AREIMREKLDVAYKGELS 122
>gi|74198326|dbj|BAB28408.3| unnamed protein product [Mus musculus]
Length = 142
Score = 101 bits (251), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKI 110
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 111 ARKVLQEKVDVFYNGENS 128
>gi|197927090|ref|NP_001128189.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform a [Mus musculus]
gi|81895172|sp|Q80VP5.1|CL065_MOUSE RecName: Full=Probable peptide chain release factor C12orf65
homolog, mitochondrial; Flags: Precursor
gi|28422444|gb|AAH46909.1| RIKEN cDNA 2810006K23 gene [Mus musculus]
gi|148687649|gb|EDL19596.1| RIKEN cDNA 2810006K23, isoform CRA_b [Mus musculus]
Length = 184
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKI 110
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 111 ARKVLQEKVDVFYNGENS 128
>gi|74180243|dbj|BAE24439.1| unnamed protein product [Mus musculus]
Length = 152
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 43/78 (55%), Positives = 62/78 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKI 110
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV NGE+S
Sbjct: 111 ARKVLQEKVDVFYNGENS 128
>gi|449279303|gb|EMC86938.1| hypothetical protein A306_04532 [Columba livia]
Length = 162
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 57/71 (80%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E +++E+FVRG GPGGQA KTNNCVVL HIP+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 53 LTEAELKEQFVRGDGPGGQATNKTNNCVVLKHIPSGIVVKCHQTRSVEQNRKIAREILQE 112
Query: 88 QWDVQVNGEDS 98
+ D+ GEDS
Sbjct: 113 KVDLFYKGEDS 123
>gi|154757477|gb|AAI51776.1| C17H12ORF65 protein [Bos taurus]
Length = 143
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 63/78 (80%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE++++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 55 LDERELEEQFVKGHGPGGQATNKTSNCVVLRHVPSGIVVKCHQTRSVDQNRKLARRILQE 114
Query: 88 QWDVQVNGEDSLNAQIRR 105
+ DV NGE+SL + +R
Sbjct: 115 KVDVFYNGENSLVCREKR 132
>gi|229368188|gb|ACQ59074.1| C12orf65 homolog [Anoplopoma fimbria]
Length = 169
Score = 100 bits (249), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 75/107 (70%), Gaps = 6/107 (5%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D +P +DE +++E+FVRGSGPGGQA KT NCVVL HIP+G V+KCHQ+RS+ NRK
Sbjct: 47 DLIDLPVLDEDELEEQFVRGSGPGGQATNKTGNCVVLKHIPSGTVVKCHQTRSVDINRKR 106
Query: 81 ARELLVAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL 121
AR+++ + DV GE S +++R+ +++R+A + ++++L
Sbjct: 107 ARDIMREKLDVVYKGELSEIIVKKKESELRKQEKRRKANENLERKRL 153
>gi|156374287|ref|XP_001629739.1| predicted protein [Nematostella vectensis]
gi|156216746|gb|EDO37676.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 100 bits (248), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/99 (55%), Positives = 71/99 (71%), Gaps = 5/99 (5%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
Y V K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PTGI CHQ+RSL+ NR A
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIA 57
Query: 82 RELLVAQWDVQVNGEDSLNA-QIRRIDEKRRATQEQKKR 119
RELL+ Q D NG+DS A QI +I +KR+AT ++++
Sbjct: 58 RELLLNQLDQLYNGKDSKAAIQIAKI-KKRKATYARRRK 95
>gi|431912146|gb|ELK14284.1| hypothetical protein PAL_GLEAN10008800 [Pteropus alecto]
Length = 169
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 60/72 (83%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE +++E+FV+G GPGGQA KT+NCVVL HIP+G+V+KCHQ+RS+ +NRK AR++L
Sbjct: 40 LDESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGLVVKCHQTRSVDQNRKLARKILQE 99
Query: 88 QWDVQVNGEDSL 99
+ DV NGE+SL
Sbjct: 100 KVDVFYNGENSL 111
>gi|225717004|gb|ACO14348.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 60/78 (76%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PTGIV+KCHQ+RS+ NRK
Sbjct: 45 DYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKR 104
Query: 81 ARELLVAQWDVQVNGEDS 98
AR+++ + +V GE+S
Sbjct: 105 ARQIMREKLEVIYKGEES 122
>gi|47226435|emb|CAG08451.1| unnamed protein product [Tetraodon nigroviridis]
Length = 156
Score = 100 bits (248), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 74/102 (72%), Gaps = 6/102 (5%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P ++E D++E+FVRGSGPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ NRK AR+++
Sbjct: 52 PVLNEDDLEEQFVRGSGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDINRKRARDIM 111
Query: 86 VAQWDVQVNGEDS------LNAQIRRIDEKRRATQEQKKRKL 121
+ DV GE S +++R+ D++++ + ++++L
Sbjct: 112 REKLDVLQKGELSEILVKKKESELRKQDKRKKVNENLERKRL 153
>gi|225715830|gb|ACO13761.1| C12orf65 homolog [Esox lucius]
Length = 167
Score = 99.8 bits (247), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 44/78 (56%), Positives = 60/78 (76%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY +P ++E ++ E+FVRGSGPGGQA KT+NCVVL H PTGIV+KCHQ+RS+ NRK
Sbjct: 45 DYIDLPALNEDELDEQFVRGSGPGGQATNKTSNCVVLRHNPTGIVVKCHQTRSVETNRKR 104
Query: 81 ARELLVAQWDVQVNGEDS 98
AR+++ + +V GE+S
Sbjct: 105 ARQIMREKLEVIYKGEES 122
>gi|417396497|gb|JAA45282.1| Putative mitochondrial polypeptide chain release factor [Desmodus
rotundus]
Length = 171
Score = 99.4 bits (246), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/85 (49%), Positives = 66/85 (77%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ + +DE +++E+FV+G GPGGQA KT+NCVVL H+P+G+V+KCHQ+RS+ +NRK
Sbjct: 45 DHPVLLPLDEGELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGLVVKCHQTRSVDQNRKI 104
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRR 105
AR+++ + D+ NGE+SL + +R
Sbjct: 105 ARKIMQEKVDIFYNGENSLAHREKR 129
>gi|327276060|ref|XP_003222789.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Anolis carolinensis]
Length = 197
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 57/71 (80%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++E+FVRGSGPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK AR +L
Sbjct: 88 LNEADLEEQFVRGSGPGGQATNKTSNCVVLKHLPSGIVVKCHQTRSVEQNRKKARTILQE 147
Query: 88 QWDVQVNGEDS 98
+ DV GE S
Sbjct: 148 KVDVFYKGESS 158
>gi|56753039|gb|AAW24729.1| SJCHGC03759 protein [Schistosoma japonicum]
Length = 163
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/108 (47%), Positives = 69/108 (63%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+E D+ E FVRG GPGGQ++ T NCVVL H PTGI++KC SR L +NR+ AR L
Sbjct: 40 FNECDLSEMFVRGWGPGGQSINTTANCVVLKHEPTGIMVKCQDSRELEKNRELARRRLND 99
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
+ DV NGE+S QI R + + + +K A K+A+K+REG+E
Sbjct: 100 KLDVHFNGENSRIQQIHRQQKLKENQSYLRSKKRLAAKQAFKKREGLE 147
>gi|355390285|ref|NP_001239017.1| probable peptide chain release factor C12orf65, mitochondrial
[Gallus gallus]
Length = 164
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 58/72 (80%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
++ E +++E+FVRG GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 52 ELTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQ 111
Query: 87 AQWDVQVNGEDS 98
+ D+ GEDS
Sbjct: 112 EKVDLFYKGEDS 123
>gi|345323062|ref|XP_001507092.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Ornithorhynchus anatinus]
Length = 173
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/113 (46%), Positives = 78/113 (69%), Gaps = 7/113 (6%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 55 LNESELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKKAREILQE 114
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQE-------QKKRKLDALKKAWKEREG 133
+ D+ GE+S + +R EK + ++ +KK+ L L+KA +E G
Sbjct: 115 KVDIFYKGENSYIFKAKREAEKNKREKKRKAKEILEKKKHLKELQKACQEDVG 167
>gi|326929619|ref|XP_003210956.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Meleagris gallopavo]
Length = 165
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 41/72 (56%), Positives = 58/72 (80%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
++ E +++E+FVRG GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK ARE+L
Sbjct: 55 QLTEAELKEQFVRGDGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVEKNRKIAREILQ 114
Query: 87 AQWDVQVNGEDS 98
+ D+ GE+S
Sbjct: 115 EKVDLFYKGEES 126
>gi|156343066|ref|XP_001621028.1| hypothetical protein NEMVEDRAFT_v1g7994 [Nematostella vectensis]
gi|156206594|gb|EDO28928.1| predicted protein [Nematostella vectensis]
Length = 87
Score = 97.4 bits (241), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/90 (56%), Positives = 64/90 (71%), Gaps = 4/90 (4%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
Y V K+ E+DI+ERFV+G G GGQ V KTNNCV L H+PTGI CHQ+RSL+ NR A
Sbjct: 1 YYHVVKLQEEDIEERFVKGWGKGGQKVNKTNNCVELRHVPTGI---CHQTRSLTRNRSIA 57
Query: 82 RELLVAQWDVQVNGEDSLNA-QIRRIDEKR 110
RELL+ Q D NG+DS A QI +I +++
Sbjct: 58 RELLLNQLDQLYNGKDSKAAIQIAKIKKRK 87
>gi|400260483|pdb|2RSM|A Chain A, Solution Structure And Sirna-Mediated Knockdown Analysis
Of The Mitochondrial Disease-Related Protein C12orf65
(Ict2)
Length = 115
Score = 95.1 bits (235), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 59/78 (75%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 36 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKCHQTRSVDQNRKI 95
Query: 81 ARELLVAQWDVQVNGEDS 98
AR++L + DV N S
Sbjct: 96 ARKVLQEKVDVFYNSGPS 113
>gi|194214381|ref|XP_001492966.2| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Equus caballus]
Length = 166
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/79 (55%), Positives = 63/79 (79%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D +P ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+KCHQ+RS+ +NRK
Sbjct: 48 DRPALPSLEESELEEQFVKGHGPGGQATNKTSNCVVLKHMPSGIVVKCHQTRSVDQNRKL 107
Query: 81 ARELLVAQWDVQVNGEDSL 99
AR++L + DV NGE+SL
Sbjct: 108 ARKILQEKVDVFYNGENSL 126
>gi|260785096|ref|XP_002587599.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
gi|229272748|gb|EEN43610.1| hypothetical protein BRAFLDRAFT_95745 [Branchiostoma floridae]
Length = 177
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 2/95 (2%)
Query: 37 FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGE 96
F RG GPGGQA KTNNCV+L H+PTGIV+KCHQ+RSL ENRK AR+ + + D+ + G+
Sbjct: 75 FQRGWGPGGQATNKTNNCVLLKHVPTGIVVKCHQTRSLDENRKIARQHMREKLDLHLKGQ 134
Query: 97 DS-LNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
+S L + R + K+R +++ + L+ K+A+K+
Sbjct: 135 ESELVKEKRELAIKKREKRKKANKNLEK-KRAFKQ 168
>gi|367038745|ref|XP_003649753.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL 8126]
gi|346997014|gb|AEO63417.1| hypothetical protein THITE_2125932 [Thielavia terrestris NRRL 8126]
Length = 223
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NR AR+LL A+
Sbjct: 23 ESEIEETFIKGSGPGGQKINKTNSAVQLRHIPTGIVVKSQATRSRSQNRAIARQLLAARL 82
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
D VNG S A + + KR A++ +K R+
Sbjct: 83 DELVNGAQSRTAIVSEVKRKRAASRAKKSRR 113
>gi|348554383|ref|XP_003463005.1| PREDICTED: probable peptide chain release factor C12orf65,
mitochondrial-like [Cavia porcellus]
Length = 182
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 39/63 (61%), Positives = 52/63 (82%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 95
+FV+G GPGGQA KTNNCVVL H+P+G+V+KCHQ+RS+ +NRK AR++L + DV NG
Sbjct: 63 QFVKGHGPGGQATNKTNNCVVLKHVPSGLVVKCHQTRSVDQNRKLARKILQEKVDVFYNG 122
Query: 96 EDS 98
E+S
Sbjct: 123 ENS 125
>gi|212526542|ref|XP_002143428.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei ATCC
18224]
gi|210072826|gb|EEA26913.1| peptidyl-tRNA hydrolase domain protein [Talaromyces marneffei ATCC
18224]
Length = 177
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 71/103 (68%), Gaps = 1/103 (0%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+D+KDI +++G+GPGGQ + KTN+ V L H PTGIV+K +RS S+N+K A+E+L
Sbjct: 39 PKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKSQATRSRSQNQKIAKEIL 98
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-RKLDALKKA 127
A+ +V GE S A + +KR+A+ +KK RK AL++A
Sbjct: 99 AAKVEVLEKGEQSREAIKNALKKKRKASSMKKKRRKYRALEEA 141
>gi|196010673|ref|XP_002115201.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
gi|190582584|gb|EDV22657.1| hypothetical protein TRIADDRAFT_28629 [Trichoplax adhaerens]
Length = 125
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/106 (46%), Positives = 69/106 (65%), Gaps = 1/106 (0%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
+Y +I KDI+E FV+GSGPGGQ V K++NCV+L H PTGIVIKCHQSRS NR
Sbjct: 14 NYYAQSQIPTKDIEESFVKGSGPGGQKVNKSSNCVILKHKPTGIVIKCHQSRSQYHNRII 73
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQE-QKKRKLDALK 125
AR+LL + + N ++ + ++++ T + + KRKL+ LK
Sbjct: 74 ARQLLKDKIEASQNCSNNSQEKKFLKQKRKKMTSKIRSKRKLEILK 119
>gi|393245369|gb|EJD52879.1| hypothetical protein AURDEDRAFT_157434 [Auricularia delicata
TFB-10046 SS5]
Length = 328
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/70 (55%), Positives = 52/70 (74%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP ++E D+ E FVRGSGPGGQ++ KT NCV LTH PTG+ + C +RSL++NR+ AR
Sbjct: 185 VPTLNEDDLDEAFVRGSGPGGQSINKTRNCVQLTHRPTGLRVDCQMTRSLADNRRIARIW 244
Query: 85 LVAQWDVQVN 94
L+ + D QVN
Sbjct: 245 LLRKLDEQVN 254
>gi|242781170|ref|XP_002479747.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
10500]
gi|218719894|gb|EED19313.1| peptidyl-tRNA hydrolase domain protein [Talaromyces stipitatus ATCC
10500]
Length = 174
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 53/120 (44%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 13 SLFRKYDLDYSKV----PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKC 68
SLF Y K PK+D+KDI +++G+GPGGQ + KTN+ V L H PTGIV+K
Sbjct: 24 SLFSTYPARAVKQLPPRPKLDDKDITGSYLKGTGPGGQKINKTNSAVQLIHKPTGIVVKS 83
Query: 69 HQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-RKLDALKKA 127
+RS S+N+K ARE+L A+ + GE S A + KR+A+ +KK RK AL++A
Sbjct: 84 QATRSRSQNQKIAREILAAKVEELEKGEQSREAIKNALKRKRKASSMKKKRRKYRALEEA 143
>gi|58257471|gb|AAW69357.1| peptide chain release factor-like protein [Magnaporthe grisea]
gi|440470023|gb|ELQ39112.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae Y34]
gi|440489487|gb|ELQ69136.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae P131]
Length = 195
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+KC ++RS +NRK AR+LL +
Sbjct: 67 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLATRL 126
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKK----RKLDALK 125
D NG+ S +A + K+RA+ +K RKL+A K
Sbjct: 127 DDLNNGDQSRSAIVGAHKVKKRASAAKKSARKYRKLEAEK 166
>gi|389644480|ref|XP_003719872.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
gi|351639641|gb|EHA47505.1| peptidyl-tRNA hydrolase domain-containing protein [Magnaporthe
oryzae 70-15]
Length = 201
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 67/100 (67%), Gaps = 4/100 (4%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E F++GSGPGGQ + KTN+ V L HIPTGIV+KC ++RS +NRK AR+LL +
Sbjct: 73 ETEIEESFLKGSGPGGQKINKTNSAVQLKHIPTGIVVKCQETRSRDQNRKIARQLLATRL 132
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKK----RKLDALK 125
D NG+ S +A + K+RA+ +K RKL+A K
Sbjct: 133 DDLNNGDQSRSAIVGAHKVKKRASAAKKSARKYRKLEAEK 172
>gi|444724902|gb|ELW65488.1| hypothetical protein TREES_T100008977 [Tupaia chinensis]
Length = 214
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 40/63 (63%), Positives = 52/63 (82%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 95
+FV+G GPGGQA KT+NCVVL HIP+GIV+KCHQ+RS+ +NRK AR++L + DV NG
Sbjct: 111 QFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKCHQTRSVDQNRKLARKILQEKVDVFYNG 170
Query: 96 EDS 98
E+S
Sbjct: 171 ENS 173
>gi|336257871|ref|XP_003343757.1| hypothetical protein SMAC_04415 [Sordaria macrospora k-hell]
gi|380091615|emb|CCC10747.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 250
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 56/73 (76%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 81 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 140
Query: 86 VAQWDVQVNGEDS 98
A+ D +NG+ S
Sbjct: 141 AAKVDFHLNGDKS 153
>gi|85101373|ref|XP_961134.1| hypothetical protein NCU04174 [Neurospora crassa OR74A]
gi|16944642|emb|CAD11402.1| conserved hypothetical protein [Neurospora crassa]
gi|28922674|gb|EAA31898.1| predicted protein [Neurospora crassa OR74A]
Length = 172
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 64
Query: 86 VAQWDVQVNGEDS 98
A+ D+ +NG+ S
Sbjct: 65 AAKVDLFLNGDKS 77
>gi|336472220|gb|EGO60380.1| hypothetical protein NEUTE1DRAFT_97551 [Neurospora tetrasperma
FGSC 2508]
gi|350294560|gb|EGZ75645.1| hypothetical protein NEUTE2DRAFT_126599 [Neurospora tetrasperma
FGSC 2509]
Length = 168
Score = 88.6 bits (218), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/73 (53%), Positives = 57/73 (78%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+ E +++E +++GSGPGGQ + KTN+ V L HIPT IVIKC ++RS ++NRK ARE+L
Sbjct: 5 PKLPEDELEEVYLKGSGPGGQKINKTNSAVQLRHIPTNIVIKCQETRSRTQNRKLAREIL 64
Query: 86 VAQWDVQVNGEDS 98
A+ D+ +NG+ S
Sbjct: 65 AAKVDLFLNGDKS 77
>gi|256085783|ref|XP_002579092.1| hypothetical protein [Schistosoma mansoni]
gi|360043221|emb|CCD78633.1| hypothetical protein Smp_079810 [Schistosoma mansoni]
Length = 155
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/107 (44%), Positives = 65/107 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+E D+ E V GSGPGGQ++ KT NCVVL HIPTGIV+KC SR L NR AR+ L
Sbjct: 30 FNECDLSEMAVLGSGPGGQSINKTANCVVLKHIPTGIVVKCQDSRELERNRILARQRLND 89
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGI 134
+ DV NGE+S Q+R ++ + + +K A K+ +K G+
Sbjct: 90 KLDVHFNGENSRIEQLRHREKLKDHQLYLRSKKRLAAKQEFKSIVGL 136
>gi|302690942|ref|XP_003035150.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
gi|300108846|gb|EFJ00248.1| hypothetical protein SCHCODRAFT_52216 [Schizophyllum commune H4-8]
Length = 257
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/71 (54%), Positives = 54/71 (76%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
KVP++ E+D++E FVRGSGPGGQA+ KT N V L H PTGI + C ++RSL +NRK AR+
Sbjct: 149 KVPELREEDLEESFVRGSGPGGQAINKTANNVQLVHKPTGIRVVCQETRSLEQNRKRARK 208
Query: 84 LLVAQWDVQVN 94
+++A+ D N
Sbjct: 209 IMIAKLDQLYN 219
>gi|242223756|ref|XP_002477455.1| predicted protein [Postia placenta Mad-698-R]
gi|220722947|gb|EED77345.1| predicted protein [Postia placenta Mad-698-R]
Length = 275
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C ++RSLS+NRK AR +
Sbjct: 164 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRI 223
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 224 LLGKLDALYN 233
>gi|340914850|gb|EGS18191.1| putative translation release factor [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 231
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E F++GSGPGGQ + KTN+ V L H PTGIV+KC +RS +NRK ARELL +
Sbjct: 86 ESEIEESFLKGSGPGGQKINKTNSAVQLRHTPTGIVVKCQATRSREQNRKIARELLAQKL 145
Query: 90 DVQVNGEDSLNAQIRRI 106
D +NG+ S A + I
Sbjct: 146 DELINGDKSRTAIVSEI 162
>gi|339237345|ref|XP_003380227.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
gi|316976972|gb|EFV60157.1| nicotinamide phosphoribosyltransferase [Trichinella spiralis]
Length = 544
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 8 LSLASSLFRKYDL---DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+SL +F++ + DY P ++E D++E+FV G GPGGQ V K NCV L H+PTG+
Sbjct: 392 ISLLGGIFQRCSISRKDYP-FPPLEEPDLEEKFVSGHGPGGQNVNKRQNCVFLRHVPTGL 450
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
+K H+ R L NR AR L + D +NGE+S A + +++ + K+RK +
Sbjct: 451 SVKVHEDRLLQRNRIIARVRLQEKLDQLLNGENSFLALKAKELKQKSLKAQWKRRKGREM 510
Query: 125 KKAWKERE 132
K+ KER+
Sbjct: 511 KRLAKERQ 518
>gi|449019728|dbj|BAM83130.1| similar to bacterial peptide chain release factor [Cyanidioschyzon
merolae strain 10D]
Length = 205
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 39/76 (51%), Positives = 55/76 (72%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+++E D++E FV+G GPGGQ V KT++CV+L H PTGIVI+C RS +NR+ AR LL
Sbjct: 98 ELNEADLEETFVKGGGPGGQKVNKTSSCVILRHTPTGIVIRCQAFRSQFQNRQEARRLLA 157
Query: 87 AQWDVQVNGEDSLNAQ 102
+ D+Q+ GE S +Q
Sbjct: 158 RKLDLQLRGEASQVSQ 173
>gi|393907104|gb|EFO19652.2| hypothetical protein LOAG_08838 [Loa loa]
Length = 152
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 66/105 (62%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P I +D ++ + G GPGGQ V T N V + H+PTGIV++ HQSR L EN + A+E L
Sbjct: 29 PVIRSEDCVQKIISGWGPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQENIEIAQERL 88
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
D +NGE+S +AQ+ R++ +R A ++KK + LKK + +
Sbjct: 89 KHAVDRYLNGENSYDAQLERMERERGAMNKRKKAVIRDLKKMYSQ 133
>gi|242214518|ref|XP_002473081.1| predicted protein [Postia placenta Mad-698-R]
gi|220727819|gb|EED81727.1| predicted protein [Postia placenta Mad-698-R]
Length = 268
Score = 86.3 bits (212), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C ++RSLS+NRK AR +
Sbjct: 159 VPELKEEDLEEAFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQETRSLSQNRKLARRI 218
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 219 LLGKLDALYN 228
>gi|118396926|ref|XP_001030799.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila]
gi|89285114|gb|EAR83136.1| Peptidyl-tRNA hydrolase domain containing protein [Tetrahymena
thermophila SB210]
Length = 636
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 54/73 (73%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P+IDEKD++ +FV+GSGPGGQ+V KT+N VL H PTGI ++ H SR L +N++ + L
Sbjct: 520 PQIDEKDLEWKFVKGSGPGGQSVNKTSNNAVLIHKPTGIQVRSHASRELDKNKQYCMKQL 579
Query: 86 VAQWDVQVNGEDS 98
+ DV +NGE+S
Sbjct: 580 SEKLDVLINGENS 592
>gi|389749198|gb|EIM90375.1| hypothetical protein STEHIDRAFT_154200 [Stereum hirsutum FP-91666
SS1]
Length = 270
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 50/70 (71%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P++ E D++E FVRGSGPGGQ+V KT N V L H PTGI + CH++RSL +NR AR+
Sbjct: 162 IPELKESDLEENFVRGSGPGGQSVNKTENNVQLLHKPTGIRVTCHETRSLEQNRTIARKK 221
Query: 85 LVAQWDVQVN 94
L+ Q D N
Sbjct: 222 LLNQLDQLAN 231
>gi|392567655|gb|EIW60830.1| hypothetical protein TRAVEDRAFT_36415 [Trametes versicolor
FP-101664 SS1]
Length = 277
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E D++E FVRGSGPGGQ+V KT N V L H PTG+ + C ++RSL +NRK AR++
Sbjct: 161 VPELKEADLEESFVRGSGPGGQSVNKTENNVQLLHKPTGLRVACQETRSLQQNRKIARKI 220
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 221 LLGKLDALYN 230
>gi|340522855|gb|EGR53088.1| hypothetical protein TRIREDRAFT_124322 [Trichoderma reesei QM6a]
Length = 220
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 62/91 (68%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
+ +I+E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 49 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKLAREILAQRI 108
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
D NG+ S +A + + +KR + +K R+
Sbjct: 109 DELTNGDHSRSAIVGAVKKKRADSAAKKSRR 139
>gi|145550427|ref|XP_001460892.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428723|emb|CAK93495.1| unnamed protein product [Paramecium tetraurelia]
Length = 723
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/72 (51%), Positives = 51/72 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I + D++ +F++G GPGGQA+ KT+NCV LTH PTGI IKC +SR L N+ A + L
Sbjct: 613 IHQTDLEWKFIKGGGPGGQAINKTSNCVQLTHTPTGIQIKCQKSRDLETNKNYAIKALKE 672
Query: 88 QWDVQVNGEDSL 99
+ D Q+NG +SL
Sbjct: 673 KLDEQINGTNSL 684
>gi|452825605|gb|EME32601.1| bacterial peptide chain release factor-like protein [Galdieria
sulphuraria]
Length = 223
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 67/103 (65%), Gaps = 2/103 (1%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E+D+ E+F+RG GPGGQ++ KT +CVVL H PTGI +KC +SRS NR+ AR+ L +
Sbjct: 101 EQDLDEKFIRGGGPGGQSINKTESCVVLVHKPTGIWVKCQESRSQFRNRQIARQRLKEKI 160
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
D+ GE+S AQ +I + R ++K+ + K+ KERE
Sbjct: 161 DLYYRGEESKVAQ--KIAKIRARKANRRKKAIKKHYKSKKERE 201
>gi|395330192|gb|EJF62576.1| hypothetical protein DICSQDRAFT_57884 [Dichomitus squalens LYAD-421
SS1]
Length = 280
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 52/70 (74%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P++ E+D++E FVRGSGPGGQ+V KT N V L H PTGI + C ++RSL +NRK AR++
Sbjct: 164 LPELKEEDLEESFVRGSGPGGQSVNKTENNVQLLHKPTGIRVTCQETRSLMQNRKLARKI 223
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 224 LLDKLDALFN 233
>gi|448517215|ref|XP_003867740.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis Co 90-125]
gi|380352079|emb|CCG22303.1| hypothetical protein CORT_0B05940 [Candida orthopsilosis]
Length = 180
Score = 85.5 bits (210), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 70/110 (63%), Gaps = 2/110 (1%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ E+DIQE F++G GPGGQ + KTN+ V LTH PTGIV+ C +RS +NRK ARE+L
Sbjct: 33 VKEEDIQESFIKGGRGPGGQKINKTNSKVQLTHKPTGIVVTCQATRSQEQNRKKAREILA 92
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDALKKAWKEREGIE 135
+ D N E S NA + +K + ++ +K RK AL +A +E + ++
Sbjct: 93 LKLDDLYNPETSRNALLTERAQKVKQSKAKKSNRKYRALNEAKEEEKALQ 142
>gi|169854029|ref|XP_001833692.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
gi|116505342|gb|EAU88237.1| hypothetical protein CC1G_03909 [Coprinopsis cinerea okayama7#130]
Length = 264
Score = 85.1 bits (209), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 52/70 (74%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E+D++E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSLS+NRK AR+
Sbjct: 155 VPELKEEDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLSQNRKIARKR 214
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 215 LLEKLDKLAN 224
>gi|409046443|gb|EKM55923.1| hypothetical protein PHACADRAFT_93577 [Phanerochaete carnosa
HHB-10118-sp]
Length = 278
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 53/67 (79%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
K+P++ E+DI+E FVRGSGPGGQ++ KT N V L H P+GI + C ++RSL++NRK AR+
Sbjct: 162 KIPELKEEDIEETFVRGSGPGGQSINKTENNVQLVHKPSGIRVTCQETRSLTQNRKIARK 221
Query: 84 LLVAQWD 90
+L+ + D
Sbjct: 222 ILLDKLD 228
>gi|449543486|gb|EMD34462.1| hypothetical protein CERSUDRAFT_117318, partial [Ceriporiopsis
subvermispora B]
Length = 224
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
++P++ E+DI+E FVRGSGPGGQ++ KT N V L H P+G+ + C ++RSLS+NRK AR
Sbjct: 109 QIPELREEDIEETFVRGSGPGGQSINKTENNVQLLHKPSGLRVSCQETRSLSQNRKLARR 168
Query: 84 LLVAQWDVQVN 94
LL+ + D N
Sbjct: 169 LLLQKLDTLQN 179
>gi|325185474|emb|CCA19957.1| unnamed protein product putative [Albugo laibachii Nc14]
Length = 152
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/111 (41%), Positives = 70/111 (63%), Gaps = 8/111 (7%)
Query: 11 ASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 70
A++LF+ + E+D+ E+FV+GSG GGQ + K NCV+L H PTGI ++C +
Sbjct: 23 AANLFQTRNF----ASAFREEDLNEQFVKGSGKGGQKINKVRNCVLLKHSPTGIQVRCQK 78
Query: 71 SRSLSENRKTARELLVAQWDVQVNGEDSL-NAQIRRIDEK---RRATQEQK 117
+R L +NR+ AR+LL + D NGE S+ N +I++I ++ RRA QK
Sbjct: 79 TRCLDDNRRIARKLLTEKLDDLYNGEKSVRNQKIQKIQKRKANRRAKATQK 129
>gi|324521421|gb|ADY47851.1| Peptide chain release factor [Ascaris suum]
Length = 141
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 69/107 (64%), Gaps = 5/107 (4%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P+I +D +++F+ GSGPGGQ V N V+L HIPTGIV+K H+SR L +N + A E L
Sbjct: 35 PEIRREDCEQKFISGSGPGGQKVNTAQNAVMLKHIPTGIVVKVHESRLLPKNIEIAYERL 94
Query: 86 VAQW--DVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
++ D VN E Q+++++ RA +E+ KRK +AL++ +E
Sbjct: 95 RLKYALDRHVNKEKCYEEQLKKLE---RAKEEKLKRKREALRQMKRE 138
>gi|403416990|emb|CCM03690.1| predicted protein [Fibroporia radiculosa]
Length = 1597
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E D++E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSLS+NRK AR +
Sbjct: 155 VPQLKEVDLEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVACQETRSLSQNRKLARRV 214
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 215 LLDKLDAYYN 224
>gi|408396484|gb|EKJ75641.1| hypothetical protein FPSE_04142 [Fusarium pseudograminearum CS3096]
Length = 189
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E +V+GSGPGGQ + KTN+ V L H+PTGIV+K +RS +NRK ARELL +
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103
Query: 90 DVQVNGEDSLNAQIRRIDE 108
D NG+ S +A + R+ E
Sbjct: 104 DELRNGDQSRSAIVGRVKE 122
>gi|348678380|gb|EGZ18197.1| hypothetical protein PHYSODRAFT_383672 [Phytophthora sojae]
Length = 96
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E D+ E FV+GSG GGQ + K NCV+LTH+PTG+ ++C ++RSL NR+ AR+LL+ +
Sbjct: 3 EADLDESFVKGSGKGGQKINKVRNCVLLTHVPTGLQVRCQKTRSLDGNRRAARKLLLQKL 62
Query: 90 DVQVNG 95
D VNG
Sbjct: 63 DDHVNG 68
>gi|46125917|ref|XP_387512.1| hypothetical protein FG07336.1 [Gibberella zeae PH-1]
Length = 189
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E +V+GSGPGGQ + KTN+ V L H+PTGIV+K +RS +NRK ARELL +
Sbjct: 44 ESEIEESYVKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRDQNRKHARELLAQRV 103
Query: 90 DVQVNGEDSLNAQIRRIDE 108
D NG+ S +A + R+ E
Sbjct: 104 DELRNGDQSRSAIVGRVKE 122
>gi|171694017|ref|XP_001911933.1| hypothetical protein [Podospora anserina S mat+]
gi|170946957|emb|CAP73761.1| unnamed protein product [Podospora anserina S mat+]
Length = 187
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 60/91 (65%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E F++GSGPGGQ + KTN+ V + H+PT IVIKC +RS S+NRK AR++L +
Sbjct: 10 ESEIEESFLKGSGPGGQKINKTNSAVQIKHLPTNIVIKCQATRSRSQNRKIARDILAERL 69
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
D NG S A + + +KR + +K R+
Sbjct: 70 DELYNGSQSRVAIVGSVKKKRADSAAKKSRR 100
>gi|409082683|gb|EKM83041.1| hypothetical protein AGABI1DRAFT_111562, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 263
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 50/66 (75%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E+D++E FVRGSGPGGQ+V KT N V L H PTGI + C +RSL +NRK AR++
Sbjct: 160 VPELREEDLEESFVRGSGPGGQSVNKTENNVQLLHKPTGIRVACQDTRSLVQNRKIARKI 219
Query: 85 LVAQWD 90
L+ + D
Sbjct: 220 LLERLD 225
>gi|390598412|gb|EIN07810.1| hypothetical protein PUNSTDRAFT_88482, partial [Punctularia
strigosozonata HHB-11173 SS5]
Length = 246
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/70 (52%), Positives = 50/70 (71%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
P++ E+D++E FVRG GPGGQA+ KTNN V L H PTGI + C Q+RSL NR+ AR++
Sbjct: 151 TPELREEDLEESFVRGHGPGGQAINKTNNNVQLIHKPTGIRVTCQQTRSLDLNRRYARQI 210
Query: 85 LVAQWDVQVN 94
L+ + D N
Sbjct: 211 LLDKLDQLAN 220
>gi|336367117|gb|EGN95462.1| hypothetical protein SERLA73DRAFT_186477 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379836|gb|EGO20990.1| hypothetical protein SERLADRAFT_475544 [Serpula lacrymans var.
lacrymans S7.9]
Length = 266
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 50/67 (74%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
K+P++ E+DI+E FVRGSGPGGQ++ KT N V + H PTG+ + C ++RSL NRK AR
Sbjct: 156 KIPELREEDIEESFVRGSGPGGQSINKTENNVQIIHKPTGLRVTCQETRSLQTNRKLARR 215
Query: 84 LLVAQWD 90
+L+ + D
Sbjct: 216 ILLEKLD 222
>gi|449300516|gb|EMC96528.1| hypothetical protein BAUCODRAFT_47992, partial [Baudoinia
compniacensis UAMH 10762]
Length = 111
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 52/76 (68%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PKI E DI E F++GSGPGGQ + KT++ V + HIPTGIV+K ++RS NRK AR+LL
Sbjct: 6 PKIVETDITESFLKGSGPGGQKINKTSSAVQIKHIPTGIVVKSQETRSRELNRKFARQLL 65
Query: 86 VAQWDVQVNGEDSLNA 101
+ D NG+ S A
Sbjct: 66 AEKLDQLENGDQSRTA 81
>gi|449683013|ref|XP_002163246.2| PREDICTED: probable peptide chain release factor C12orf65 homolog,
mitochondrial-like, partial [Hydra magnipapillata]
Length = 132
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D QE+F++GSGPGGQ + KT+NCV L H TGI++KC ++RSL NR ARE L+
Sbjct: 29 LKESDFQEKFIKGSGPGGQKINKTSNCVELKHDATGIIVKCQETRSLERNRVIARERLLE 88
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQE-QKKRKL 121
+ N +S Q +R+D K++ + ++KR+L
Sbjct: 89 KLRFLYNPSES--KQQQRLDAKQKQEKNIERKRRL 121
>gi|406860457|gb|EKD13515.1| peptidyl-tRNA hydrolase domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 134
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE + E F++GSGPGGQ + KT++ V L H+PTG+V+K +RS ++NRK ARE+L
Sbjct: 8 VDESEFTEVFLKGSGPGGQKINKTSSAVQLKHLPTGLVLKVQATRSRTQNRKIAREMLAE 67
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK----LDALKKAWKE 130
+ + G+ S A +R +KR+++ +K R+ LD LK +E
Sbjct: 68 RVEELEKGKQSRVAVVRETKQKRKSSAVKKSRRKYRLLDELKMKGQE 114
>gi|348678390|gb|EGZ18207.1| hypothetical protein PHYSODRAFT_383105 [Phytophthora sojae]
Length = 103
Score = 82.0 bits (201), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D+ E FV+GSG GGQ + K NCV+LTH+ TG+ ++C ++RSL NR+ AR+LL+
Sbjct: 1 LREADLDESFVKGSGKGGQKINKVRNCVLLTHVTTGLQVRCQKTRSLDGNRRAARKLLLQ 60
Query: 88 QWDVQVNGEDSLNAQ----IRRIDEKRRATQEQK 117
+ D NG S ++ +RR RRA + K
Sbjct: 61 KLDDHANGALSKRSEKIERLRRKKASRRAKSKHK 94
>gi|312084786|ref|XP_003144416.1| hypothetical protein LOAG_08838 [Loa loa]
Length = 140
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 61/95 (64%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 95
+ + G GPGGQ V T N V + H+PTGIV++ HQSR L EN + A+E L D +NG
Sbjct: 30 KIISGWGPGGQKVNMTRNAVTIKHVPTGIVVRVHQSRLLQENIEIAQERLKHAVDRYLNG 89
Query: 96 EDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
E+S +AQ+ R++ +R A ++KK + LKK + +
Sbjct: 90 ENSYDAQLERMERERGAMNKRKKAVIRDLKKMYSQ 124
>gi|327355568|gb|EGE84425.1| peptidyl-tRNA hydrolase domain-containing protein [Ajellomyces
dermatitidis ATCC 18188]
Length = 184
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 8 LSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
L L S R + PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K
Sbjct: 17 LRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVK 76
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 124
+RS ++N+K A +L + ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 77 SQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|358389669|gb|EHK27261.1| hypothetical protein TRIVIDRAFT_63025 [Trichoderma virens Gv29-8]
Length = 197
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 55/77 (71%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
+ +I+E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 47 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKLAREILAQRV 106
Query: 90 DVQVNGEDSLNAQIRRI 106
D +NG+ S +A + I
Sbjct: 107 DEFINGDQSRSAVVGAI 123
>gi|402594635|gb|EJW88561.1| hypothetical protein WUBG_00526 [Wuchereria bancrofti]
Length = 144
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 63/99 (63%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 91
DI ++ + G GPGGQ V T N V + H+PTG+V++ HQSR L EN + A E L D
Sbjct: 8 DIFQKVISGWGPGGQKVNMTKNAVTIKHVPTGVVVRVHQSRLLQENIEIALERLKHAVDR 67
Query: 92 QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
+NGE+S +AQ+ R++ +R A ++K+ + +KK + +
Sbjct: 68 HLNGENSYDAQLERMERERGARNKRKRAVIREMKKIYAQ 106
>gi|298713472|emb|CBJ27027.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 191
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 1/92 (1%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
++DI+ERFV+GSGPGGQ + K NCV LTH+P+G+ + C SR L NR AR+ L +
Sbjct: 39 DEDIEERFVKGSGPGGQKINKVRNCVQLTHVPSGVSVSCQDSRELHANRHIARKRLKEKV 98
Query: 90 DVQVNGEDS-LNAQIRRIDEKRRATQEQKKRK 120
+ Q+ G DS + +I +I K+ +Q + + K
Sbjct: 99 EFQLMGADSKVGRRINKIRNKKARSQRKSRLK 130
>gi|429859250|gb|ELA34038.1| peptidyl-trna hydrolase domain protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 204
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 64/100 (64%), Gaps = 1/100 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
++ R + ++ +K+++ P D DI+E +++GSGPGGQ + KT++ V L HIP
Sbjct: 43 ALVARFSACPAAALKKHEMPPRPKPPPD-SDIEESYLKGSGPGGQKINKTSSAVQLKHIP 101
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
TGIV+K +RS S+NRK ARELL + D NG+ S +A
Sbjct: 102 TGIVVKSQATRSRSQNRKIARELLAQKLDDLQNGDQSRSA 141
>gi|392595661|gb|EIW84984.1| hypothetical protein CONPUDRAFT_87482 [Coniophora puteana
RWD-64-598 SS2]
Length = 263
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 47/67 (70%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
VP++ E+DI+E FVRGSGPGGQ++ KT N V L H PTGI + C ++RSL NR AR
Sbjct: 152 VPELKEEDIEESFVRGSGPGGQSINKTENNVQLLHKPTGIRVSCQETRSLQTNRMLARRR 211
Query: 85 LVAQWDV 91
L + DV
Sbjct: 212 LTEKLDV 218
>gi|261196175|ref|XP_002624491.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
gi|239587624|gb|EEQ70267.1| conserved hypothetical protein [Ajellomyces dermatitidis SLH14081]
Length = 196
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 8 LSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
L L S R + PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K
Sbjct: 17 LRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVK 76
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 124
+RS ++N+K A +L + ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 77 SQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|347836659|emb|CCD51231.1| hypothetical protein [Botryotinia fuckeliana]
Length = 159
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 3/108 (2%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D E F+ GSGPGGQ + KT++ V L HIPTG+V+K +RS ++NRK AR++L
Sbjct: 8 IDEADFTEVFLHGSGPGGQKINKTSSAVQLKHIPTGMVLKVQATRSRTQNRKIARQMLAE 67
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRAT---QEQKKRKLDALKKAWKERE 132
+ ++ G++S A + +KR+++ + ++K +L A +KA K E
Sbjct: 68 RLELLEKGKESRVAIVGETKKKRKSSAVKKSKRKYRLLAEEKAMKAGE 115
>gi|239614579|gb|EEQ91566.1| conserved hypothetical protein [Ajellomyces dermatitidis ER-3]
Length = 196
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 70/118 (59%), Gaps = 1/118 (0%)
Query: 8 LSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
L L S R + PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K
Sbjct: 17 LRLFSHCCRLFVKQMPPRPKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVK 76
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 124
+RS ++N+K A +L + ++Q+ GE S A KR+A++E+K KRK L
Sbjct: 77 SQATRSRTQNQKIAMGILAEKVELQLKGEKSRAAIKAETKRKRKASREKKAKRKYRKL 134
>gi|322705423|gb|EFY97009.1| peptidyl-tRNA hydrolase domain protein [Metarhizium anisopliae
ARSEF 23]
Length = 182
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 91
+I+E F++GSGPGGQ + KTN+ V L H+PTGIV+K +RS S+NRK ARELL + D
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDD 103
Query: 92 QVNGEDS 98
++GE S
Sbjct: 104 LLHGEQS 110
>gi|322697002|gb|EFY88787.1| peptidyl-tRNA hydrolase domain protein [Metarhizium acridum CQMa
102]
Length = 187
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 50/67 (74%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 91
+I+E F++GSGPGGQ + KTN+ V L H+PTGIV+K +RS S+NRK ARELL + D
Sbjct: 44 EIEESFLKGSGPGGQKINKTNSAVQLKHVPTGIVVKSQATRSRSQNRKHARELLAQKVDD 103
Query: 92 QVNGEDS 98
++GE S
Sbjct: 104 LLHGEQS 110
>gi|358401406|gb|EHK50712.1| hypothetical protein TRIATDRAFT_18591, partial [Trichoderma
atroviride IMI 206040]
Length = 140
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
+ +I+E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS S+NRK ARE+L +
Sbjct: 13 DSEIEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRSQNRKQAREILAQKV 72
Query: 90 DVQVNGEDS 98
D NG+ S
Sbjct: 73 DEFFNGDQS 81
>gi|321255196|ref|XP_003193341.1| hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
gi|317459811|gb|ADV21554.1| Hypothetical protein CGB_D1860W [Cryptococcus gattii WM276]
Length = 316
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 48/65 (73%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I E +++ERFVRG GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 127 EIPEDELEERFVRGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 186
Query: 87 AQWDV 91
+ +V
Sbjct: 187 ERLEV 191
>gi|380494985|emb|CCF32737.1| RF-1 domain-containing protein [Colletotrichum higginsianum]
Length = 186
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 12 SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQS 71
S+ +K+++ P D DI+E +++GSGPGGQ + KT++ V L HIPTGIV+K +
Sbjct: 58 SAALKKHEMPPRPRPPPDS-DIEESYLKGSGPGGQKINKTSSAVQLKHIPTGIVVKSQAT 116
Query: 72 RSLSENRKTARELLVAQWDVQVNGEDSLNA 101
RS ++NRK ARE+L + D NGE S +A
Sbjct: 117 RSRTQNRKIAREILAQKIDDLQNGEQSRSA 146
>gi|341881932|gb|EGT37867.1| hypothetical protein CAEBREN_16253 [Caenorhabditis brenneri]
Length = 421
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 60/103 (58%), Gaps = 5/103 (4%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
++FRR ++ + Y K P++ ++D +++++ G GPGGQ V N V LTHIP
Sbjct: 6 AMFRRMMATPKQKLKNY-----KFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIP 60
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
TG V+K H+SR L +N A E + D Q+NGE+ Q++
Sbjct: 61 TGTVVKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEEQLK 103
>gi|320587327|gb|EFW99807.1| peptidyl-tRNA hydrolase domain containing protein [Grosmannia
clavigera kw1407]
Length = 149
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E FV+G+GPGGQ + KTN+ V L H PTGIV+K +RS S+NR AR++L A+
Sbjct: 52 EDEIEEMFVKGTGPGGQKINKTNSAVQLIHRPTGIVVKSQATRSRSQNRTIARQVLAARL 111
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
D NG S A + +++A+ +K R+
Sbjct: 112 DELHNGSQSRTAIVADSKRRKKASASKKSRR 142
>gi|320037150|gb|EFW19088.1| hypothetical protein CPSG_04634 [Coccidioides posadasii str.
Silveira]
Length = 172
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR LS +++L K P IDE +I +++GSGPGGQ + KT++ V L H+PT
Sbjct: 23 RRPLSSSNALAAK---QMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNT 79
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDA 123
V+K +RS S+NRK A ++L + ++ G++S A + KR+A+ +K KRK A
Sbjct: 80 VVKSQATRSRSQNRKIALQILAEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRA 139
Query: 124 L 124
L
Sbjct: 140 L 140
>gi|384501006|gb|EIE91497.1| hypothetical protein RO3G_16208 [Rhizopus delemar RA 99-880]
Length = 166
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 53/80 (66%), Gaps = 7/80 (8%)
Query: 23 SKVPKIDEK-------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 75
SK PK + K D+ E FV+GSGPGGQ + K ++CV L HIPTGI ++C QSRSL+
Sbjct: 32 SKTPKQERKKIVLRDEDLIETFVKGSGPGGQCINKRSSCVDLRHIPTGIRVQCQQSRSLA 91
Query: 76 ENRKTARELLVAQWDVQVNG 95
+NR AR+LL + D NG
Sbjct: 92 DNRGIARKLLREKLDELENG 111
>gi|440632293|gb|ELR02212.1| hypothetical protein GMDG_01005 [Geomyces destructans 20631-21]
Length = 168
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/98 (43%), Positives = 64/98 (65%), Gaps = 1/98 (1%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E++ E F+ GSGPGGQ + KT++ V L H+PTGIV+K +RS S+NRK ARELL
Sbjct: 39 LPEEEFTEAFLCGSGPGGQKINKTSSAVQLKHLPTGIVLKVQATRSRSQNRKIARELLAE 98
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 124
+ ++ G +S A + + KR+++ +K KRK AL
Sbjct: 99 RVELLEKGAESRVAIVGNVKAKRKSSATKKSKRKYKAL 136
>gi|134115677|ref|XP_773552.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256178|gb|EAL18905.1| hypothetical protein CNBI1660 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 315
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 126 EIPEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 185
Query: 87 AQWDV 91
+ +V
Sbjct: 186 ERLEV 190
>gi|346322815|gb|EGX92413.1| peptidyl-tRNA hydrolase domain protein [Cordyceps militaris CM01]
Length = 170
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 59/89 (66%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDV 91
D++E +++GSGPGGQ + KTN+ V L HIPTGIV+K +RS ++NRK AR++L + D
Sbjct: 44 DLEESYLKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRAQNRKHARDILAQRLDD 103
Query: 92 QVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
NG +S + + +KR + +K R+
Sbjct: 104 LENGPESRAGIVGAVRKKRADSAAKKSRR 132
>gi|119467602|ref|XP_001257607.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
gi|119405759|gb|EAW15710.1| peptidyl-tRNA hydrolase domain protein [Neosartorya fischeri NRRL
181]
Length = 208
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 4 FRRHLSLASSLFRKYDLDYSKVP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
RR +LASSL K ++P KID+ D+ +++G+GPGGQ + KTN+ V L H
Sbjct: 32 LRRSFTLASSLSAK------QLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHK 85
Query: 61 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
PTGIV+K +RS S+N K AR++L + + + G+ S NA
Sbjct: 86 PTGIVVKSQATRSRSQNEKIARQILADKVEELLKGDASRNA 126
>gi|50545671|ref|XP_500374.1| YALI0B01144p [Yarrowia lipolytica]
gi|49646240|emb|CAG82589.1| YALI0B01144p [Yarrowia lipolytica CLIB122]
Length = 154
Score = 79.0 bits (193), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
R S + +L +K PK+DE +I+E F+RGSGPGGQ + + + +THIPTG+V
Sbjct: 7 RAFSTSRALLKKTP-QMPPRPKVDENEIRESFIRGSGPGGQCINRRSTRCQITHIPTGLV 65
Query: 66 IKCHQSRSLSENRKTARELLV 86
+ ++RSL ENRK AR++L
Sbjct: 66 VSSQKTRSLEENRKIARQILA 86
>gi|170094760|ref|XP_001878601.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647055|gb|EDR11300.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%), Gaps = 1/78 (1%)
Query: 13 SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSR 72
S +K L S +P++ E+D++E FVRGSGPGGQ++ KT N V L H PTG+ + C +R
Sbjct: 172 SALKKAHLQRS-IPELREEDLEETFVRGSGPGGQSINKTENNVQLLHKPTGLRVSCQDTR 230
Query: 73 SLSENRKTARELLVAQWD 90
SLS NRK AR L+ + D
Sbjct: 231 SLSLNRKLARRWLLEKLD 248
>gi|268537314|ref|XP_002633793.1| Hypothetical protein CBG03485 [Caenorhabditis briggsae]
Length = 137
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 5/128 (3%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
++FRR + + Y K P++ + D +++++ G GPGGQ V N V LTH P
Sbjct: 6 AMFRRTFATPRQKLKGY-----KFPEVKKDDCEQKYISGWGPGGQKVNTAQNAVQLTHRP 60
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 121
TG V+K H+SR L +N + A E + D Q+NG++ Q++R+ + + +K+ +
Sbjct: 61 TGTVVKVHESRLLPKNIEIAFERMKVVLDRQINGDNCYEEQLKRLQQAKEVKANKKRDQA 120
Query: 122 DALKKAWK 129
KK +K
Sbjct: 121 RKEKKVFK 128
>gi|219111103|ref|XP_002177303.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411838|gb|EEC51766.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 491
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
++P+++E D+ E FVRGSGPGGQ KT+N V L H PT + ++C +RSL +NRK AR+
Sbjct: 384 ELPELNEDDLTETFVRGSGPGGQKTNKTSNKVALLHGPTQLRVECQDTRSLQQNRKIARK 443
Query: 84 LLVAQWDVQVNGEDS 98
L A+ D +NG S
Sbjct: 444 RLRAKLDEFLNGNQS 458
>gi|405119599|gb|AFR94371.1| hypothetical protein CNAG_05106 [Cryptococcus neoformans var.
grubii H99]
Length = 315
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I E +++ERFV+G GPGGQA+ KTN+ V LTHIPTGI ++ +RS ENRK AR +L
Sbjct: 126 EIAEDELEERFVKGRGPGGQAINKTNSSVSLTHIPTGIRVQAQPTRSREENRKVARRILA 185
Query: 87 AQWDV 91
+ +V
Sbjct: 186 ERLEV 190
>gi|302911185|ref|XP_003050437.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
gi|256731374|gb|EEU44724.1| hypothetical protein NECHADRAFT_84770 [Nectria haematococca mpVI
77-13-4]
Length = 186
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E +I+E +V+GSGPGGQ + KTN+ V L HIPTGIV+K +RS +NRK ARELL +
Sbjct: 45 EFEIEESYVKGSGPGGQKINKTNSAVQLKHIPTGIVVKSQATRSRDQNRKHARELLAQRV 104
Query: 90 DVQVNGEDSLNAQIRRI 106
D NG+ S +A + ++
Sbjct: 105 DEFHNGDQSRSAIVGQV 121
>gi|68489326|ref|XP_711504.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|68489375|ref|XP_711480.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432785|gb|EAK92252.1| hypothetical protein CaO19.5488 [Candida albicans SC5314]
gi|46432811|gb|EAK92277.1| hypothetical protein CaO19.12943 [Candida albicans SC5314]
gi|238882388|gb|EEQ46026.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 171
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 8 LSLASSLFRKYDLDY-----SKVPK-----IDEKDIQERFVRGS-GPGGQAVAKTNNCVV 56
++L SLF L Y +K+P I E+DI+E+F+ G GPGGQ + KTN+ V
Sbjct: 5 INLFRSLFTSNSLKYGIPKKNKLPPRPKHLIKEEDIEEKFLHGGRGPGGQKINKTNSKVQ 64
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
LTHIPTG+V+ C +RS +NR ARE L + D N S NA
Sbjct: 65 LTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDFYNPGTSRNA 109
>gi|258570383|ref|XP_002543995.1| predicted protein [Uncinocarpus reesii 1704]
gi|237904265|gb|EEP78666.1| predicted protein [Uncinocarpus reesii 1704]
Length = 162
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+NRK A ++L
Sbjct: 40 PTIDESEITGSYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQIL 99
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDALKKAWKER 131
+ ++ G S A + + +KR+A++ +K KRK AL++ + R
Sbjct: 100 AEKVELLQKGGQSRAAIVAQTKQKRKASKTKKSKRKYRALEEEKRRR 146
>gi|392869399|gb|EJB11744.1| hypothetical protein CIMG_10212 [Coccidioides immitis RS]
Length = 172
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR LS ++ L K P IDE +I +++GSGPGGQ + KT++ V L H+PT
Sbjct: 23 RRPLSSSNDLAAK---QMPPRPTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNT 79
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDA 123
V+K +RS S+NRK A ++L + ++ G++S A + KR+A+ +K KRK A
Sbjct: 80 VVKSQATRSRSQNRKIALQILAEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRA 139
Query: 124 L 124
L
Sbjct: 140 L 140
>gi|150865855|ref|XP_001385239.2| hypothetical protein PICST_60261 [Scheffersomyces stipitis CBS
6054]
gi|149387111|gb|ABN67210.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 156
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 63/103 (61%), Gaps = 9/103 (8%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E+++ E+F++G GPGGQ + K+N+ V LTH+PTGIV+ C SRS NRK ARE+L
Sbjct: 17 IKEEELDEKFLKGGRGPGGQKINKSNSKVQLTHLPTGIVVTCQYSRSQESNRKRAREILA 76
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR------KLDA 123
+ D N E S NA + D K + Q + K+ KLDA
Sbjct: 77 LKLDDLNNPETSRNAVVN--DRKTKVKQSKSKKANRKYTKLDA 117
>gi|170575451|ref|XP_001893249.1| hypothetical protein Bm1_08890 [Brugia malayi]
gi|158600871|gb|EDP37928.1| hypothetical protein Bm1_08890 [Brugia malayi]
Length = 116
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 60/95 (63%)
Query: 36 RFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNG 95
+ + G GPGGQ V T N V + H+PTG+V++ HQSR L EN + A E L D +NG
Sbjct: 7 KVISGWGPGGQKVNMTKNAVTIKHVPTGVVVRVHQSRLLQENIEIALERLKHAVDRHLNG 66
Query: 96 EDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
E+S +AQ+ R++ +R A ++K+ + +KK + +
Sbjct: 67 ENSYDAQLERMERERGAKNKRKRAVIREMKKIYAQ 101
>gi|392901269|ref|NP_001255661.1| Protein T23B5.4, isoform a [Caenorhabditis elegans]
gi|313004791|emb|CAE17950.2| Protein T23B5.4, isoform a [Caenorhabditis elegans]
Length = 133
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 60/105 (57%), Gaps = 5/105 (4%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
++ RR L+ + Y K P + ++D +++++ G GPGGQ V N V LTH+P
Sbjct: 6 TLIRRMLATPKQKLKNY-----KFPDVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLP 60
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI 106
TG V+K H+SR L +N A E + D Q+NGE+ Q++R+
Sbjct: 61 TGTVLKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEEQLKRL 105
>gi|341881935|gb|EGT37870.1| hypothetical protein CAEBREN_31848 [Caenorhabditis brenneri]
Length = 131
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 3 IFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
+FRR ++ + Y K P++ ++D +++++ G GPGGQ V N V LTHIPT
Sbjct: 1 MFRRMMATPKQKLKNY-----KFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHIPT 55
Query: 63 GIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
G V+K H+SR L +N A E + D Q+NGE+ Q++
Sbjct: 56 GTVVKVHESRLLPKNIDIAFERMKFVLDRQINGENCYEEQLK 97
>gi|393220459|gb|EJD05945.1| hypothetical protein FOMMEDRAFT_145291 [Fomitiporia mediterranea
MF3/22]
Length = 299
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P+++E D++E FVRGSGPGGQ++ KT+N V L H PTGI + C ++RSL NR AR L
Sbjct: 189 PELNEADLEESFVRGSGPGGQSINKTSNNVQLLHKPTGIRVTCQETRSLQTNRMIARRNL 248
Query: 86 VAQWD 90
+ + D
Sbjct: 249 IEKLD 253
>gi|70984320|ref|XP_747675.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|66845302|gb|EAL85637.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
Af293]
gi|159122461|gb|EDP47582.1| peptidyl-tRNA hydrolase domain protein [Aspergillus fumigatus
A1163]
Length = 208
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 63/101 (62%), Gaps = 9/101 (8%)
Query: 4 FRRHLSLASSLFRKYDLDYSKVP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
RR +LASSL K ++P KID+ D+ +++G+GPGGQ + KTN+ V L H
Sbjct: 32 LRRSFTLASSLSAK------QLPPRLKIDDADLTVSYLKGTGPGGQKINKTNSAVQLIHK 85
Query: 61 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
PTGIV+K +RS S+N K AR++L + + + G+ S NA
Sbjct: 86 PTGIVVKSQATRSRSQNEKIARQILADKVEELLKGDASRNA 126
>gi|303324301|ref|XP_003072138.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240111848|gb|EER29993.1| Peptidyl-tRNA hydrolase domain containing protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 136
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P IDE +I +++GSGPGGQ + KT++ V L H+PT V+K +RS S+NRK A ++L
Sbjct: 5 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHLPTNTVVKSQATRSRSQNRKIALQIL 64
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK-KRKLDAL 124
+ ++ G++S A + KR+A+ +K KRK AL
Sbjct: 65 AEKVELLQKGDESRAAIVAETKRKRKASMTKKSKRKYRAL 104
>gi|406909990|gb|EKD50121.1| peptide chain release factor [uncultured bacterium]
Length = 192
Score = 78.2 bits (191), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEKDI ERF+RGSG GGQ + KT+NCV L H PTG I+C QSR +ENR AR L
Sbjct: 94 IDEKDIIERFIRGSGKGGQKINKTSNCVQLVHTPTGRCIRCQQSRDRNENRYLARCSLAD 153
Query: 88 QWDVQVNG---EDSLNAQIRRIDEKRRATQEQKK 118
Q + ++ + + I+++ E+ R + ++K
Sbjct: 154 QIENEMTSALLKQARQTHIKQVAERVRLSHLRRK 187
>gi|354543716|emb|CCE40438.1| hypothetical protein CPAR2_104740 [Candida parapsilosis]
Length = 177
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E++I+E F++G GPGGQ + KTN+ V LTH PTGIV+ C +RS +NRK ARE+L
Sbjct: 32 IKEEEIEESFIKGGRGPGGQKINKTNSKVQLTHKPTGIVVTCQATRSQEQNRKKAREILA 91
Query: 87 AQWDVQVNGEDSLNA 101
+ D N + S NA
Sbjct: 92 LKLDDLYNPKTSRNA 106
>gi|353234841|emb|CCA66862.1| related to polypeptide chain release factors [Piriformospora indica
DSM 11827]
Length = 265
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 50/71 (70%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
++P ++E D++E FV+G GPGGQ + K + V L HIP+G+ I+C ++RSL ENR+ AR+
Sbjct: 157 EIPALNEDDLEESFVKGGGPGGQCINKRSTNVDLLHIPSGLRIQCQETRSLQENRRIARK 216
Query: 84 LLVAQWDVQVN 94
LL + D N
Sbjct: 217 LLARKLDELYN 227
>gi|310792386|gb|EFQ27913.1| RF-1 domain-containing protein [Glomerella graminicola M1.001]
Length = 193
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 60/90 (66%), Gaps = 1/90 (1%)
Query: 12 SSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQS 71
S+ +K+++ P D +I+E +++GSGPGGQ + KT++ V L HIPTG+V+K +
Sbjct: 33 SAALKKHEMPPRPKPPPD-SEIEESYLKGSGPGGQKINKTSSAVQLKHIPTGVVVKSQAT 91
Query: 72 RSLSENRKTARELLVAQWDVQVNGEDSLNA 101
RS ++NRK ARE+L + D NG+ S +A
Sbjct: 92 RSRTQNRKIAREILAQKLDDLQNGDQSRSA 121
>gi|403172972|ref|XP_003332081.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170075|gb|EFP87662.2| hypothetical protein PGTG_13448 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 110
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/61 (57%), Positives = 43/61 (70%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P +DE ++ E+FVRGSGPGGQAV KTNN V L H PTGI ++ H RS NR AR +
Sbjct: 35 IPPLDENELIEQFVRGSGPGGQAVNKTNNAVSLIHKPTGIRVQAHTHRSREANRNQARRV 94
Query: 85 L 85
L
Sbjct: 95 L 95
>gi|344232760|gb|EGV64633.1| hypothetical protein CANTEDRAFT_120400 [Candida tenuis ATCC 10573]
Length = 164
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 50/72 (69%), Gaps = 1/72 (1%)
Query: 28 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E+DI+E F++G SGPGGQ + KTN+ V L HIPTGIV+ SRS +NR+ ARE+L
Sbjct: 39 IKEEDIEESFIKGGSGPGGQKINKTNSKVQLKHIPTGIVVTSQHSRSQEQNRQKAREILA 98
Query: 87 AQWDVQVNGEDS 98
+ D+ NG S
Sbjct: 99 EKLDLMENGPKS 110
>gi|443925843|gb|ELU44604.1| RF-1 domain-containing protein [Rhizoctonia solani AG-1 IA]
Length = 266
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 49/62 (79%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
+P++ E+D++E FVRGSGPGGQA+ KT++ V L H PTGI ++C +RS +NRK AR++
Sbjct: 136 IPELREEDLEEMFVRGSGPGGQAINKTSSSVSLIHRPTGIRVQCQATRSREQNRKIARKI 195
Query: 85 LV 86
+V
Sbjct: 196 MV 197
>gi|452986667|gb|EME86423.1| hypothetical protein MYCFIDRAFT_162030, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 141
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/114 (42%), Positives = 67/114 (58%), Gaps = 7/114 (6%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E DI+E F++G+GPGGQ + KT++ V L H+PTGIV+K +RS +NRK AR +L
Sbjct: 3 IPESDIEESFLKGTGPGGQKINKTSSAVQLKHLPTGIVVKNQATRSREQNRKNARRILGE 62
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKK-----RKLDALKKAWK-EREGIE 135
+ + G S A ++ E+R+ KK RKLD A K E +GIE
Sbjct: 63 KLEDMEKGPLSRTA-LKAEKERRKKASASKKARRKYRKLDEANAASKSEDDGIE 115
>gi|400598659|gb|EJP66368.1| RF-1 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 200
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 67/115 (58%), Gaps = 2/115 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
R LS + +F+K + +++E F++GSGPGGQ + KTN+ V L HIPTGIV
Sbjct: 16 RFLSTSPIIFQKPMPPRPAP--PPDSELEESFLKGSGPGGQKINKTNSAVQLKHIPTGIV 73
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
+K +RS S+NRK ARE+L + D G +S + + +KR + +K R+
Sbjct: 74 VKSQATRSRSQNRKHAREILAQKLDDLRRGGESRANIVGAVKKKRADSAAKKSRR 128
>gi|345560671|gb|EGX43796.1| hypothetical protein AOL_s00215g532 [Arthrobotrys oligospora ATCC
24927]
Length = 234
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 64/110 (58%), Gaps = 12/110 (10%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGG---------QAVAKTNNCVV 56
R LS + LF+K PK+DE DI+E+F++GSGPG + KT++ V
Sbjct: 31 RPLSSTTLLFKK---QMPPRPKVDENDIEEKFLKGSGPGMVFPHDADYIEEQNKTSSAVQ 87
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI 106
L HIPTGIV+K ++RS +NRK AR+LL ++ + GE S N I +
Sbjct: 88 LRHIPTGIVVKSQETRSREQNRKIARQLLASKLEDIEKGEQSRNNVINEV 137
>gi|295666315|ref|XP_002793708.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226278002|gb|EEH33568.1| hypothetical protein PAAG_04618 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 175
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 61/95 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK++ +I +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 42 PKLNPAEITGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 101
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 102 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 136
>gi|156064005|ref|XP_001597924.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980]
gi|154690872|gb|EDN90610.1| hypothetical protein SS1G_00010 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 201
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 63/97 (64%), Gaps = 2/97 (2%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
SI +R + ++L++K D + IDE + E F+ GSGPGGQ + KT++ V L HIP
Sbjct: 35 SIIKRSICSTTTLWKKKMPD--RPAPIDEAEFTEVFLHGSGPGGQKINKTSSAVQLKHIP 92
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 98
TG+V+K +RS ++NRK AR++L + ++ G++S
Sbjct: 93 TGMVLKVQATRSRTQNRKIARQMLAERVELLEKGKES 129
>gi|402225296|gb|EJU05357.1| hypothetical protein DACRYDRAFT_92714 [Dacryopinax sp. DJM-731 SS1]
Length = 263
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 51/71 (71%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
++P + +D++E FVRGSGPGGQA+ KT++CV L H PTGI + +RS +NRK AR+
Sbjct: 142 ELPVLKAEDLEESFVRGSGPGGQAINKTSSCVSLIHRPTGIRVLAQPTRSRQQNRKIARK 201
Query: 84 LLVAQWDVQVN 94
+L+ + D +N
Sbjct: 202 ILLDKLDQLMN 212
>gi|241951644|ref|XP_002418544.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641883|emb|CAX43846.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 171
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 11/105 (10%)
Query: 8 LSLASSLFRKYDLDY-----SKVPK-----IDEKDIQERFVRGS-GPGGQAVAKTNNCVV 56
++L SLF L Y +K+P I E+D++E+F+ G GPGGQ + K+N+ V
Sbjct: 5 INLFRSLFTSNSLKYGIPKKNKLPPRPKHLIKEEDLEEKFLHGGRGPGGQKINKSNSKVQ 64
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
LTHIPTG+V+ C +RS +NR ARE L + D N S NA
Sbjct: 65 LTHIPTGMVVSCQATRSQEQNRAIAREKLALKLDDYYNPGTSRNA 109
>gi|406695093|gb|EKC98408.1| hypothetical protein A1Q2_07422 [Trichosporon asahii var. asahii
CBS 8904]
Length = 260
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/72 (48%), Positives = 51/72 (70%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
L +VP +DE +++E+FVRG GPGGQA+ KTN+ V L H PTGI I+ +RS ++NR
Sbjct: 114 LSRHQVPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPTGIRIQSQPTRSRAQNRV 173
Query: 80 TARELLVAQWDV 91
AR++L + D+
Sbjct: 174 IARQILKERLDL 185
>gi|226293278|gb|EEH48698.1| hypothetical protein PADG_04777 [Paracoccidioides brasiliensis
Pb18]
Length = 177
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK++ ++ +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 42 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 101
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 102 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 136
>gi|326469360|gb|EGD93369.1| peptidyl-tRNA hydrolase [Trichophyton tonsurans CBS 112818]
gi|326483473|gb|EGE07483.1| hypothetical protein TEQG_06610 [Trichophyton equinum CBS 127.97]
Length = 191
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P IDE +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDESEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 86 VAQWDVQVNGEDSLNAQIRRI 106
+ ++ GE S A + +
Sbjct: 107 AEKIELLEKGEQSRAAIVNNV 127
>gi|406601462|emb|CCH46912.1| Peptide chain release factor 1 [Wickerhamomyces ciferrii]
Length = 397
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P IDE + E F++G GPGGQ + KTN+ V L HI GIV+ C ++RS +NRK ARE L
Sbjct: 151 PTIDESEFTEVFIKGGGPGGQKINKTNSKVQLKHIEYGIVVDCQETRSREQNRKIAREKL 210
Query: 86 VAQWDV----QVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKE 130
+ D + N + +L A R+ + R E+ + K++ LK+ +E
Sbjct: 211 ALEVDAIRNPKFNRKIALEAFERKKAKLAREKTERSREKMEKLKRQKEE 259
>gi|187736226|ref|YP_001878338.1| peptide chain release factor [Akkermansia muciniphila ATCC
BAA-835]
gi|187426278|gb|ACD05557.1| peptide chain release factor [Akkermansia muciniphila ATCC
BAA-835]
Length = 120
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 40/59 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E+D++E FVRGSG GGQ V KTNNCV L H PTGI +KCH RS NR AR L
Sbjct: 19 IREQDLEESFVRGSGRGGQKVNKTNNCVYLRHTPTGIAVKCHADRSRELNRFLARRELC 77
>gi|407846678|gb|EKG02695.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 459
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++TA +L+
Sbjct: 305 NVHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVA 364
Query: 87 AQ 88
Q
Sbjct: 365 QQ 366
>gi|149245034|ref|XP_001527051.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449445|gb|EDK43701.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 172
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 28 IDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I+E +++E+F+ G SGPGGQ + KTN+ V LTH PTGIV+ C +SRS +NRK ARE+L
Sbjct: 32 INEDELEEKFLHGGSGPGGQKINKTNSKVQLTHKPTGIVVSCQESRSQDQNRKKAREILA 91
Query: 87 AQWDVQVNGEDSLNA 101
+ + N + S N
Sbjct: 92 LKLEDIQNPQGSRNT 106
>gi|71393327|ref|XP_802218.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70859733|gb|EAN80772.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 270
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 44/61 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++TA +L+
Sbjct: 117 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKETALQLVAQ 176
Query: 88 Q 88
Q
Sbjct: 177 Q 177
>gi|401885354|gb|EJT49473.1| hypothetical protein A1Q1_01377 [Trichosporon asahii var. asahii
CBS 2479]
Length = 232
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 50/72 (69%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
+ VP +DE +++E+FVRG GPGGQA+ KTN+ V L H PTGI I+ +RS ++NR
Sbjct: 86 MSAMPVPDLDESELEEKFVRGRGPGGQAINKTNSSVSLLHKPTGIRIQSQPTRSRAQNRV 145
Query: 80 TARELLVAQWDV 91
AR++L + D+
Sbjct: 146 IARQILKERLDL 157
>gi|225683891|gb|EEH22175.1| predicted protein [Paracoccidioides brasiliensis Pb03]
Length = 247
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 61/95 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK++ ++ +++GSGPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 114 PKLNPAEVTGTYLKGSGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 173
Query: 86 VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
+ ++ + G+ S A + +KR+A +K R+
Sbjct: 174 AEKVELHLKGDKSRAAIVAETKKKRKARSVKKARR 208
>gi|392577361|gb|EIW70490.1| hypothetical protein TREMEDRAFT_60995 [Tremella mesenterica DSM
1558]
Length = 146
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 7/81 (8%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR---- 82
+I E D++ERF +G GPGGQA+ KTN+ V L H+PTGI ++ +RS ENRK AR
Sbjct: 2 EIPESDLEERFDKGRGPGGQAINKTNSAVSLIHLPTGIRVQAQPTRSREENRKAARRILA 61
Query: 83 ---ELLVAQWDVQVNGEDSLN 100
ELL AQ + D++N
Sbjct: 62 EKLELLSAQKAFEEASSDNIN 82
>gi|398407371|ref|XP_003855151.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici
IPO323]
gi|339475035|gb|EGP90127.1| hypothetical protein MYCGRDRAFT_37496 [Zymoseptoria tritici
IPO323]
Length = 178
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 45/58 (77%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I E DI E F++GSGPGGQ + KT++ V L H+PTGIV+KC ++RS ++NRK AR +L
Sbjct: 40 IVESDITEAFLKGSGPGGQKINKTSSAVQLKHLPTGIVVKCQETRSRAQNRKLARRIL 97
>gi|157870704|ref|XP_001683902.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
gi|68126969|emb|CAJ05291.1| peptide chain release factor-like protein [Leishmania major strain
Friedlin]
Length = 439
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 22 YSKVPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 273 FTMMPVLDPVSVDVHENDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSA 332
Query: 75 SENRKTARELLVAQ 88
N++ A +++ Q
Sbjct: 333 LGNKELALQMVAQQ 346
>gi|401423431|ref|XP_003876202.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492443|emb|CBZ27717.1| peptide chain release factor-like protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 439
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 7/74 (9%)
Query: 22 YSKVPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 273 FTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSA 332
Query: 75 SENRKTARELLVAQ 88
N++ A +++ Q
Sbjct: 333 LGNKELALQMVAQQ 346
>gi|406968596|gb|EKD93410.1| Class I peptide chain release factor [uncultured bacterium]
Length = 138
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 69/107 (64%), Gaps = 1/107 (0%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI +DI E+FVRGSG GGQ + KT++CVVL H+P+G ++C + R S+NR +A +LL+
Sbjct: 19 KILPEDISEQFVRGSGAGGQKINKTSSCVVLKHLPSGTEVRCQKHREQSKNRLSAYKLLI 78
Query: 87 AQWDVQVNGEDSLNA-QIRRIDEKRRATQEQKKRKLDALKKAWKERE 132
+ + +V G S +I +I +++R ++ K K+ KK E++
Sbjct: 79 LKIEDKVLGAKSERMKKIHKIIKQQRKRSKRAKEKVLQAKKLQTEKK 125
>gi|190346160|gb|EDK38179.2| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 6 RHLSLASSLFRKYDLDYSKVPK-----IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTH 59
RH+S + LF+ L +++P I E++I+E F++G GPGGQ + K+N+ V LTH
Sbjct: 12 RHISTSGHLFKL--LKKNELPPRPKWLIVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTH 69
Query: 60 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
IPTG V+ C SRS +NRK ARE+L + + N + A +R
Sbjct: 70 IPTGTVVTCQYSRSQEQNRKKAREILALKLEELQNPQGCRTAVLR 114
>gi|213401645|ref|XP_002171595.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
gi|211999642|gb|EEB05302.1| peptide release factor [Schizosaccharomyces japonicus yFS275]
Length = 144
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E D+ E F+RG GPGGQ + KT+ L H P+G++++C ++RS +NRK AR+ L +
Sbjct: 37 EADLDETFIRGHGPGGQKINKTSIVCQLRHKPSGLIVRCQETRSREQNRKIARKRLAEKL 96
Query: 90 DVQVNGEDSLNAQIR 104
D+ NGE S AQ R
Sbjct: 97 DLLANGEKSRLAQDR 111
>gi|146421313|ref|XP_001486606.1| hypothetical protein PGUG_02277 [Meyerozyma guilliermondii ATCC
6260]
Length = 171
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 6 RHLSLASSLFRKYDLDYSKVPK-----IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTH 59
RH+S + LF+ L +++P I E++I+E F++G GPGGQ + K+N+ V LTH
Sbjct: 12 RHISTSGHLFKL--LKKNELPPRPKWLIVEEEIKEVFLKGGRGPGGQKINKSNSKVQLTH 69
Query: 60 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
IPTG V+ C SRS +NRK ARE+L + + N + A +R
Sbjct: 70 IPTGTVVTCQYSRSQEQNRKKAREILALKLEELQNPQGCRTAVLR 114
>gi|328852030|gb|EGG01179.1| hypothetical protein MELLADRAFT_92698 [Melampsora larici-populina
98AG31]
Length = 177
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 72/134 (53%), Gaps = 21/134 (15%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAV----------------- 48
R + SSLF L K+ K++E D+ E FVRGSGPGGQ +
Sbjct: 18 RSIQTTSSLFLPSKL--PKIQKLNESDLIEEFVRGSGPGGQCINSLSFSQNMLMDDSCIL 75
Query: 49 AKTNN-CVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN-GEDSLNAQIRRI 106
KTN V L H PTGI ++CH RS NRK AR++L + D+ +N G+ L + ++
Sbjct: 76 KKTNFISVSLIHKPTGIRVQCHAQRSRESNRKEARKILSEKVDLFLNPGKSKLEFKWQKA 135
Query: 107 DEKRRATQEQKKRK 120
+K+RA Q+KR+
Sbjct: 136 RDKKRAKIRQRKRR 149
>gi|315053701|ref|XP_003176225.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
gi|311338071|gb|EFQ97273.1| hypothetical protein MGYG_00314 [Arthroderma gypseum CBS 118893]
Length = 192
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P ID+ +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 86 VAQWDVQVNGEDSLNAQIRRI 106
+ ++ GE S A + +
Sbjct: 107 AEKIELLEKGEQSRAAIVNNV 127
>gi|452845154|gb|EME47087.1| hypothetical protein DOTSEDRAFT_85667 [Dothistroma septosporum
NZE10]
Length = 191
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 44/58 (75%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I E DI E F++GSGPGGQ + KT++ V L H+PTGIV+K ++RS +NR+TAR +L
Sbjct: 41 IPETDITESFLKGSGPGGQKINKTSSAVQLKHLPTGIVVKSQETRSREQNRRTARRIL 98
>gi|146088922|ref|XP_001466182.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
gi|134070284|emb|CAM68621.1| peptide chain release factor-like protein [Leishmania infantum
JPCM5]
Length = 439
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 22 YSKVPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 273 FTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSA 332
Query: 75 SENRKTARELLVAQWDVQ 92
N++ A + + Q VQ
Sbjct: 333 LGNKELALQTVAQQILVQ 350
>gi|398016586|ref|XP_003861481.1| peptide chain release factor-like protein [Leishmania donovani]
gi|322499707|emb|CBZ34781.1| peptide chain release factor-like protein [Leishmania donovani]
Length = 439
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 50/78 (64%), Gaps = 7/78 (8%)
Query: 22 YSKVPKID-------EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
++ +P +D E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQSRS
Sbjct: 273 FTMMPVLDPVSVDVHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQSRSA 332
Query: 75 SENRKTARELLVAQWDVQ 92
N++ A + + Q VQ
Sbjct: 333 LGNKELALQTVAQQILVQ 350
>gi|327309086|ref|XP_003239234.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
gi|326459490|gb|EGD84943.1| peptidyl-tRNA hydrolase [Trichophyton rubrum CBS 118892]
Length = 190
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 52/81 (64%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P ID+ +I +++GSGPGGQ + KT++ V L HIPT V+KC +RS S+NRK A+ +L
Sbjct: 47 PTIDDSEITGTYLKGSGPGGQKINKTSSAVQLIHIPTNTVVKCQATRSQSQNRKIAKRIL 106
Query: 86 VAQWDVQVNGEDSLNAQIRRI 106
+ ++ GE S A + +
Sbjct: 107 AEKIELLEKGEQSRAAILNNV 127
>gi|171914371|ref|ZP_02929841.1| Class I peptide chain release factor [Verrucomicrobium spinosum DSM
4136]
Length = 141
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 64/104 (61%), Gaps = 10/104 (9%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E+D++E F+RG+G GGQ + KT++ VVLTH+PTG+ ++C + RS S NR ARE L +
Sbjct: 24 IREEDLEETFIRGTGAGGQKINKTSSTVVLTHVPTGLEVRCQRERSQSLNRVVAREELCS 83
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
+ E+ L A + +RR E+KKR+ + KER
Sbjct: 84 KL------EERLAA----VKLERRNEVEKKKRQNRKRPRGLKER 117
>gi|453087926|gb|EMF15967.1| hypothetical protein SEPMUDRAFT_81256 [Mycosphaerella populorum
SO2202]
Length = 198
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I EKDI E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS +NRK AR +L
Sbjct: 43 ISEKDIIESFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKNQATRSRDQNRKNARRIL 100
>gi|388856138|emb|CCF50318.1| uncharacterized protein [Ustilago hordei]
Length = 422
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 75
RKY L +DEKD+ E+F+RGSGPGGQA+ K + V L+HIPTG + C ++RS
Sbjct: 306 RKYPL------TLDEKDLAEKFIRGSGPGGQAINKLSTNVQLSHIPTGTKVTCQETRSRD 359
Query: 76 ENRKTARELLVAQWDVQVNGE 96
NR+ AR L + + GE
Sbjct: 360 RNRELARRRLSLTLEKLLRGE 380
>gi|296423832|ref|XP_002841456.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637696|emb|CAZ85647.1| unnamed protein product [Tuber melanosporum]
Length = 237
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/149 (32%), Positives = 78/149 (52%), Gaps = 30/149 (20%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQ------------------- 46
R ++L ++ F K P + E++I+E F++GSGPGGQ
Sbjct: 29 RAIALTATNFGK---PMPPRPSVKEEEIEESFLKGSGPGGQKSESQYPLHCMLLRTHVTP 85
Query: 47 ----AVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQ 102
AV KT++ V L H+PTGIV+K +RS S+NRK AR++L + + G +S
Sbjct: 86 GNISAVNKTSSAVQLKHLPTGIVVKSQATRSRSQNRKIARKILAEKLEFMERGTESRVGA 145
Query: 103 IRRIDEKRRATQEQKKR----KLDALKKA 127
+ D +R+A++ +K + KL+A K A
Sbjct: 146 LAERDRRRKASKTKKAKRKYAKLEADKGA 174
>gi|407404213|gb|EKF29770.1| peptide chain release factor 1, putative [Trypanosoma cruzi
marinkellei]
Length = 459
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++ A +L+
Sbjct: 306 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQ 365
Query: 88 Q 88
Q
Sbjct: 366 Q 366
>gi|71650872|ref|XP_814125.1| peptide chain release factor 1 [Trypanosoma cruzi strain CL Brener]
gi|70879071|gb|EAN92274.1| peptide chain release factor 1, putative [Trypanosoma cruzi]
Length = 456
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 43/61 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D + FVRGSGPGGQ + ++N V LTHIP+GI +KCHQSRS N++ A +L+
Sbjct: 303 VHENDCKIEFVRGSGPGGQGMQSSSNAVCLTHIPSGISVKCHQSRSALGNKEIALQLVAQ 362
Query: 88 Q 88
Q
Sbjct: 363 Q 363
>gi|240280457|gb|EER43961.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 186
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDPSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 86 VAQWDVQVNGEDS 98
+ ++Q+ GE S
Sbjct: 95 AEKVELQLKGEQS 107
>gi|51245661|ref|YP_065545.1| peptide chain release factor 2 [Desulfotalea psychrophila LSv54]
gi|50876698|emb|CAG36538.1| probable peptide chain release factor 2 [Desulfotalea psychrophila
LSv54]
Length = 285
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS + +LD + IDEKD++ R SG GGQ V KT++ + LTH+PTG+
Sbjct: 131 RRHTSFASVMVMP-ELDNTVDVDIDEKDLRVDTYRASGAGGQHVNKTDSAIRLTHLPTGV 189
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N++ A ++L+AQ
Sbjct: 190 VVQCQNERSQHRNKEMAMKMLIAQ 213
>gi|255945923|ref|XP_002563729.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588464|emb|CAP86573.1| Pc20g12440 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 186
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 6 RHLSLASSLFRKYDLDYSK-VP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
R L+ + LF + + +K +P KI + DI +++G+GPGGQ + KTN+ V + H P
Sbjct: 12 RTLAAPARLFSQTPIVPAKPLPPRLKISDADISISYLKGTGPGGQKINKTNSAVQIIHKP 71
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 98
+G+V+KC +RS S+N K AR LL + + NG++S
Sbjct: 72 SGVVVKCQATRSQSQNAKIARSLLADKIEALENGDNS 108
>gi|425773906|gb|EKV12231.1| hypothetical protein PDIG_45560 [Penicillium digitatum PHI26]
gi|425782408|gb|EKV20318.1| hypothetical protein PDIP_17500 [Penicillium digitatum Pd1]
Length = 188
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 6 RHLSLASSLFRKYDLDYSK-VP---KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
R L+ + LF + + +K +P KI++ DI +++G+GPGGQ + KTN+ V + H P
Sbjct: 12 RTLAAPARLFSQTPIVPAKPLPPRLKINDADISISYLKGTGPGGQKINKTNSAVQIIHKP 71
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 98
+G+VIKC +RS S+N K AR LL + + + G++S
Sbjct: 72 SGVVIKCQATRSQSQNAKIARSLLADRVEAREKGDNS 108
>gi|154338826|ref|XP_001565635.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062687|emb|CAM39130.1| peptide chain release factor-like protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 302
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 43/61 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D + FVRGSGPGGQ + ++NCVVLTH P+GI +KCHQ RS N++ A +++
Sbjct: 149 VHESDCKIDFVRGSGPGGQGMQSSSNCVVLTHKPSGISVKCHQCRSALGNKELALQMVAQ 208
Query: 88 Q 88
Q
Sbjct: 209 Q 209
>gi|50304901|ref|XP_452406.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641539|emb|CAH01257.1| KLLA0C04642p [Kluyveromyces lactis]
Length = 168
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 54/81 (66%), Gaps = 7/81 (8%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE---LL 85
E+DI+E+F+ G GPGGQ + K N+ V L H+PTGIV+ C +RS +NRK ARE L
Sbjct: 45 ERDIEEKFLHGGRGPGGQKINKCNSKVQLRHVPTGIVVDCQATRSRDQNRKIAREKLALR 104
Query: 86 VAQWDVQVNGEDSLNAQIRRI 106
+AQW+ NG+ + ++ +I
Sbjct: 105 LAQWE---NGDQPIERELAKI 122
>gi|399216586|emb|CCF73273.1| unnamed protein product [Babesia microti strain RI]
Length = 1420
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 11/115 (9%)
Query: 15 FRKYDLDYSKVP----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 70
FR ++ Y P + + +E+F++GSGPGGQ + K+++CV L H +V+KC Q
Sbjct: 22 FRLTNIKYLNKPIFTNSLKADEFEEKFIKGSGPGGQKINKSSSCVQLIHKKYPLVVKCQQ 81
Query: 71 SRSLSENRKTARELL------VAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 119
+R+L ENR ARE+L + + + V SL Q RRI + A +E+KKR
Sbjct: 82 TRNLQENRIIAREILQKKIFSIEKEEKMVGINLSLKEQ-RRILKLSDAEKERKKR 135
>gi|260947746|ref|XP_002618170.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
gi|238848042|gb|EEQ37506.1| hypothetical protein CLUG_01629 [Clavispora lusitaniae ATCC 42720]
Length = 180
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIK 67
SLA + +K L + I E++I E F++G GPGGQ + K+N+ V LTH PTGIV+
Sbjct: 30 SLALGIPKKNKLPPRPLWLIKEEEIDEEFLKGGRGPGGQKINKSNSKVQLTHKPTGIVVT 89
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
C SRS +NRK ARE+L + + + E+S A
Sbjct: 90 CQYSRSQEQNRKKAREILALKLEELQDPENSRTA 123
>gi|154277694|ref|XP_001539684.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150413269|gb|EDN08652.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 187
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 51/73 (69%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
PK+D ++ +++G+GPGGQA+ KTN+ V L H PTGIV+K +RS ++N+K A +L
Sbjct: 35 PKLDLSEVTGSYLKGTGPGGQAINKTNSAVQLIHKPTGIVVKSQATRSRTQNQKIAMGIL 94
Query: 86 VAQWDVQVNGEDS 98
+ ++Q+ GE S
Sbjct: 95 AEKVELQLKGEQS 107
>gi|451994802|gb|EMD87271.1| hypothetical protein COCHEDRAFT_1184107 [Cochliobolus
heterostrophus C5]
Length = 165
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/73 (49%), Positives = 49/73 (67%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P +DE D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS NRK AR +L
Sbjct: 23 PVLDESDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRIL 82
Query: 86 VAQWDVQVNGEDS 98
+ + GED+
Sbjct: 83 QDRIEELELGEDA 95
>gi|71022895|ref|XP_761677.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
gi|46101154|gb|EAK86387.1| hypothetical protein UM05530.1 [Ustilago maydis 521]
Length = 713
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 75
RKY L +DEKD+ E+F+RGSGPGGQA+ K + V LTH+PTG + C ++RS
Sbjct: 594 RKYPL------TLDEKDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRD 647
Query: 76 ENRKTARELLVAQWDVQVNGE 96
NR+ AR + + V G+
Sbjct: 648 RNRELARRRMSLTLEKLVRGD 668
>gi|322421630|ref|YP_004200853.1| class I peptide chain release factor [Geobacter sp. M18]
gi|320128017|gb|ADW15577.1| Class I peptide chain release factor [Geobacter sp. M18]
Length = 143
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ EKD++ERFV SG GGQ V K+++CV L HIP+G+ +KC +SRS S NR AR LL+
Sbjct: 23 VAEKDLEERFVHASGRGGQHVNKSSSCVYLKHIPSGLEVKCMESRSQSLNRFLARRLLLE 82
Query: 88 QWDVQVNG 95
+ + G
Sbjct: 83 KLEGAGGG 90
>gi|288817909|ref|YP_003432256.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|384128671|ref|YP_005511284.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
gi|288787308|dbj|BAI69055.1| peptide chain release factor RF-2 [Hydrogenobacter thermophilus
TK-6]
gi|308751508|gb|ADO44991.1| peptide chain release factor 2 [Hydrogenobacter thermophilus TK-6]
Length = 369
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 63/121 (52%), Gaps = 26/121 (21%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS S VP+IDEK DIQ R SG GGQ V KT+ V
Sbjct: 209 RRHTSFAS---------VSVVPQIDEKINIEIREEDIQMETFRASGAGGQYVNKTDTAVR 259
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQ 116
+ HIPTGI + C Q RS +NR A ELL A+ ++++++EK++A + +
Sbjct: 260 IRHIPTGITVSCQQERSQFQNRLKALELLKAKL---------YQLELQKLEEKKKALEGE 310
Query: 117 K 117
K
Sbjct: 311 K 311
>gi|389582206|dbj|GAB64761.1| polypeptide chain release factor 2 [Plasmodium cynomolgi strain B]
Length = 192
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/125 (40%), Positives = 76/125 (60%), Gaps = 12/125 (9%)
Query: 7 HLSLASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG- 63
HL+ S K++L K+ I +KDI+E FV+G+G GGQ V KTNNCV++ + +G
Sbjct: 49 HLNKPSQ--NKFELIRKKLEGIGVFQKDIEESFVKGTGKGGQKVNKTNNCVMIRY-DSGE 105
Query: 64 ---IVIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQIRRIDEKRRATQEQKKR 119
IVIKCH+ R L +NR ARELL + ++ N ED++ +I + EKRR + +
Sbjct: 106 GEKIVIKCHKYRCLQKNRIYARELLYDKITSIRDNLEDAITHEIEK--EKRRVLKPTDRE 163
Query: 120 KLDAL 124
K +++
Sbjct: 164 KRESI 168
>gi|156094577|ref|XP_001613325.1| hypothetical protein [Plasmodium vivax Sal-1]
gi|148802199|gb|EDL43598.1| hypothetical protein, conserved [Plasmodium vivax]
Length = 196
Score = 72.0 bits (175), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 73/126 (57%), Gaps = 8/126 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP- 61
R L + S K++L K+ I KDI+E F++G+G GGQ V KTNNCV++ +
Sbjct: 49 RLRLHVNKSYQNKFELISKKLEGIGVFPKDIEETFIKGTGKGGQKVNKTNNCVMIRYASG 108
Query: 62 --TGIVIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQIRRIDEKRRATQEQKK 118
I+IKCH+ R L +NR ARELL + V+ N ED++ +I + EKRR + +
Sbjct: 109 EGEKIIIKCHKHRCLQKNRIYARELLYDKITSVRDNLEDAITHEIEK--EKRRVLKPTDR 166
Query: 119 RKLDAL 124
K +++
Sbjct: 167 EKRESI 172
>gi|440801524|gb|ELR22542.1| peptidyltRNA hydrolase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 327
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 44/64 (68%)
Query: 22 YSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
+ K ++ E +++E+F++G GPGGQ + KTN+CV L H+PTG+ +KC + R NR A
Sbjct: 77 FEKTRQVAESELEEKFIKGGGPGGQKINKTNSCVYLKHLPTGLEVKCQEQRERGRNRVIA 136
Query: 82 RELL 85
R +L
Sbjct: 137 RRIL 140
>gi|406912966|gb|EKD52465.1| hypothetical protein ACD_62C00013G0003 [uncultured bacterium]
Length = 137
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 33 IQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWD-V 91
++E F+RGSG GGQ + KTN+CV LTH P+GIVI+C +RS +NR AR +L + + +
Sbjct: 26 LREEFIRGSGAGGQKINKTNSCVQLTHTPSGIVIRCQHTRSREQNRFFARRILCERLEAI 85
Query: 92 QVNGEDSLNAQIRRI 106
Q+ + ++ RI
Sbjct: 86 QLGKKSEKEKRLHRI 100
>gi|221052668|ref|XP_002261057.1| Polypeptide chain release factor 2 [Plasmodium knowlesi strain H]
gi|194247061|emb|CAQ38245.1| Polypeptide chain release factor 2, putative [Plasmodium knowlesi
strain H]
Length = 186
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/105 (42%), Positives = 67/105 (63%), Gaps = 8/105 (7%)
Query: 31 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTARELLVA 87
KDI+E FV+G+G GGQ V KTNNCV++ + IVIKCH+ R L +NR ARELL
Sbjct: 67 KDIEETFVKGTGKGGQKVNKTNNCVMIKYDSGNGEKIVIKCHKYRCLQKNRIYARELLYD 126
Query: 88 Q-WDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
+ ++ N ED++ +I + EKRR + + K +++K +K+R
Sbjct: 127 KITSMRENLEDAIIHEIEK--EKRRVLKPTDREKSESIK--YKKR 167
>gi|442805591|ref|YP_007373740.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442741441|gb|AGC69130.1| peptide chain release factor 2 [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 339
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D ++ ID +DI+ R SG GGQ V KT++ V LTHIPTGI
Sbjct: 183 RRHTSFASMEVLPVMNDSDEI-HIDPEDIKMDVFRASGAGGQHVNKTSSAVRLTHIPTGI 241
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR+TA ++L A+
Sbjct: 242 VVTCQNERSQHQNRETAMKMLYAK 265
>gi|297172687|gb|ADI23654.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF4000_15H13]
Length = 328
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 54/83 (65%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +D S +I++ D++ R SG GGQ V KT++ V LTH PTGI
Sbjct: 172 RRHTSFAS-VFIYPQVDDSIEIEINDDDLRVDTYRASGAGGQHVNKTDSAVRLTHAPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR TA ++L+A
Sbjct: 231 VVQCQQERSQHKNRATAMKMLLA 253
>gi|308271179|emb|CBX27788.1| Peptide chain release factor 2 [uncultured Desulfobacterium sp.]
Length = 344
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F +LD S IDEKD++ R SG GGQ V KT++ + +TH+PTGI
Sbjct: 189 KRHTSFAS-VFVYPELDNSIEIDIDEKDLRIDIFRSSGAGGQHVNKTSSAIRITHLPTGI 247
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C Q RS +N+ A +L
Sbjct: 248 VVQCQQERSQHKNKDMAMSVL 268
>gi|297263790|ref|XP_001097466.2| PREDICTED: uncharacterized protein C12orf65-like isoform 1 [Macaca
mulatta]
gi|297263792|ref|XP_002798863.1| PREDICTED: uncharacterized protein C12orf65-like isoform 2 [Macaca
mulatta]
Length = 122
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+K R L
Sbjct: 51 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDNRRPL 104
>gi|163783151|ref|ZP_02178145.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159881485|gb|EDP74995.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 367
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/92 (44%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ S +P+IDE +D++ R SG GGQ V KT+ V
Sbjct: 208 RRHTSFAA---------VSVMPQIDEDINIEVRDEDLKIETFRASGAGGQYVNKTDTAVR 258
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
LTHIPTGIV+ C Q RS +NR+ A ELL A+
Sbjct: 259 LTHIPTGIVVSCQQERSQFQNRRKALELLKAK 290
>gi|70934187|ref|XP_738357.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514509|emb|CAH83815.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 194
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 15/128 (11%)
Query: 10 LASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---I 64
L +SL K D+ K+ I K+I+E F++G+G GGQ V KTNNCV++ + T I
Sbjct: 53 LKNSLNDKLDIINKKLQDIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKI 112
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNG---EDSLNAQIRRIDEKR---RATQEQKK 118
VIKCH+ R L +NR ARELL + +N ED +N QI + EKR + T+ +K
Sbjct: 113 VIKCHKYRCLQQNRVYARELLYEKI-TSINNKAKEDIIN-QIEK--EKRQILKLTEAEKN 168
Query: 119 RKLDALKK 126
R ++ KK
Sbjct: 169 RSINYKKK 176
>gi|378731006|gb|EHY57465.1| peptide chain release factor RF-2 [Exophiala dermatitidis
NIH/UT8656]
Length = 314
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 50/73 (68%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
P + + +I +++G+GPGGQ + KTN+ LTH+PTGIV+KC +RS ++N + A+ LL
Sbjct: 180 PTLPDSEIHHVYLKGTGPGGQKINKTNSAAQLTHLPTGIVVKCQATRSRAQNHEIAKRLL 239
Query: 86 VAQWDVQVNGEDS 98
+ ++ G++S
Sbjct: 240 AEKVELLQKGDES 252
>gi|343426408|emb|CBQ69938.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 415
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/80 (42%), Positives = 51/80 (63%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE+D+ E+F+RGSGPGGQA+ K + V LTH+PTG + C ++RS NR+ AR +
Sbjct: 301 LDERDLAEKFIRGSGPGGQAINKLSTNVQLTHLPTGTKVTCQETRSRDRNRELARRRMSL 360
Query: 88 QWDVQVNGEDSLNAQIRRID 107
+ V GE + R+I+
Sbjct: 361 TLEKLVRGESGGSRIDRQIE 380
>gi|358374060|dbj|GAA90655.1| peptidyl-tRNA hydrolase domain protein [Aspergillus kawachii IFO
4308]
Length = 204
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 49/72 (68%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 45 KIQDADVTISYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 104
Query: 87 AQWDVQVNGEDS 98
+ + +NG+ S
Sbjct: 105 DKVEELLNGDQS 116
>gi|68067771|ref|XP_675820.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|68077037|ref|XP_680438.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56495222|emb|CAI02598.1| conserved hypothetical protein [Plasmodium berghei]
gi|56501376|emb|CAI04754.1| hypothetical protein PB001267.02.0 [Plasmodium berghei]
Length = 147
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/128 (41%), Positives = 75/128 (58%), Gaps = 15/128 (11%)
Query: 10 LASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---I 64
L +SL K D+ K+ I K+I+E F++G+G GGQ V KTNNCV++ + T I
Sbjct: 5 LKNSLNDKLDIINKKLQDIGICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKI 64
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNG---EDSLNAQIRRIDEKR---RATQEQKK 118
VIKCH+ R L +NR ARELL + +N ED +N QI + EKR + T+ +K
Sbjct: 65 VIKCHKYRCLQQNRVYARELLYDKI-TSINNKAKEDIIN-QIEK--EKRQILKLTESEKN 120
Query: 119 RKLDALKK 126
R ++ KK
Sbjct: 121 RSINYKKK 128
>gi|18089197|gb|AAH20885.1| C12orf65 protein [Homo sapiens]
gi|119618801|gb|EAW98395.1| hypothetical protein FLJ38663, isoform CRA_a [Homo sapiens]
Length = 119
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/54 (55%), Positives = 40/54 (74%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSL 74
DY + +DE +++E+FV+G GPGGQA KT+NCVVL HIP+GIV+K R L
Sbjct: 48 DYPALLSLDENELEEQFVKGHGPGGQATNKTSNCVVLKHIPSGIVVKVDHRRPL 101
>gi|72386553|ref|XP_843701.1| peptide chain release factor 1 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|62175752|gb|AAX69880.1| peptide chain release factor 1, putative [Trypanosoma brucei]
gi|70800233|gb|AAZ10142.1| peptide chain release factor 1, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 459
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 42/61 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ EKD FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 306 VHEKDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQ 365
Query: 88 Q 88
Q
Sbjct: 366 Q 366
>gi|118475480|ref|YP_892510.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
gi|166223624|sp|A0RQM7.1|RF2_CAMFF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118414706|gb|ABK83126.1| peptide chain release factor 2 [Campylobacter fetus subsp. fetus
82-40]
Length = 369
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S + ++D +I+EKD++ + R SG GGQ V KT + V +THIPTGI
Sbjct: 211 RRHTSFSSVMVSP-EVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 270 VVQCQNDRSQHKNKATAMKML 290
>gi|424821164|ref|ZP_18246202.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
gi|342327943|gb|EGU24427.1| Peptide chain release factor 2 [Campylobacter fetus subsp.
venerealis NCTC 10354]
Length = 369
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S + ++D +I+EKD++ + R SG GGQ V KT + V +THIPTGI
Sbjct: 211 RRHTSFSSVMVSP-EVDDDIAIEIEEKDLRLDYYRASGAGGQHVNKTESAVRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 270 VVQCQNDRSQHKNKATAMKML 290
>gi|164655297|ref|XP_001728779.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
gi|159102663|gb|EDP41565.1| hypothetical protein MGL_4114 [Malassezia globosa CBS 7966]
Length = 248
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/63 (53%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Query: 24 KVP-KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 82
K+P +DE+DI+ERF+RGSGPGGQA+ K + V L HIPT I C +RS ++NR+ AR
Sbjct: 125 KMPIDLDERDIRERFIRGSGPGGQAINKLSTNVELVHIPTSTRITCQLTRSRAQNRELAR 184
Query: 83 ELL 85
L
Sbjct: 185 RQL 187
>gi|253702397|ref|YP_003023586.1| class I peptide chain release factor [Geobacter sp. M21]
gi|251777247|gb|ACT19828.1| Class I peptide chain release factor [Geobacter sp. M21]
Length = 132
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ E+ I+ERFV SG GGQ V K+++CV L H+PTG+ +KC +SRS S NR AR LL+
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRLLL 81
>gi|443898234|dbj|GAC75571.1| hypothetical protein PANT_16d00044 [Pseudozyma antarctica T-34]
Length = 412
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/81 (45%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 16 RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLS 75
RKY L +DE+D+ E+FVRGSGPGGQA+ K + V LTH+PTG + C ++RS
Sbjct: 297 RKYPL------TLDERDLAEKFVRGSGPGGQAINKLSTNVQLTHLPTGTRLTCQETRSRD 350
Query: 76 ENRKTARELLVAQWDVQVNGE 96
NR+ AR + + V GE
Sbjct: 351 RNRELARRRMSLVLEKLVRGE 371
>gi|108804456|ref|YP_644393.1| peptide chain release factor 2 [Rubrobacter xylanophilus DSM 9941]
gi|108765699|gb|ABG04581.1| bacterial peptide chain release factor 2 (bRF-2) [Rubrobacter
xylanophilus DSM 9941]
Length = 366
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D +V +IDEKD++ R SG GGQ V KT++ V +TH+PTGI
Sbjct: 207 RRHTSFASVAVAPAIDDAVEV-EIDEKDLKVDTYRASGAGGQHVNKTDSAVRITHLPTGI 265
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +NR+TA +L A+
Sbjct: 266 VVQCQNERSQHQNRETALRVLKAR 289
>gi|197120075|ref|YP_002140502.1| peptidyl-tRNA hydrolase-like protein [Geobacter bemidjiensis Bem]
gi|197089435|gb|ACH40706.1| peptidyl-tRNA hydrolase-related protein [Geobacter bemidjiensis
Bem]
Length = 132
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ E+ I+ERFV SG GGQ V K+++CV L H+PTG+ +KC +SRS S NR AR LL+
Sbjct: 23 VSEQQIEERFVHASGRGGQHVNKSSSCVYLKHLPTGVEVKCMESRSQSLNRFLARRLLL 81
>gi|152991276|ref|YP_001356998.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
gi|166225114|sp|A6Q582.1|RF2_NITSB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|151423137|dbj|BAF70641.1| peptide chain release factor 2 [Nitratiruptor sp. SB155-2]
Length = 368
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 53/82 (64%), Gaps = 3/82 (3%)
Query: 5 RRHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS + + D D + V I++KDI+ R SG GGQ V KT++ + +THIPTG
Sbjct: 211 RRHTSFASVMVSPEVDDDINIV--IEDKDIRVDTYRASGAGGQHVNKTDSAIRITHIPTG 268
Query: 64 IVIKCHQSRSLSENRKTARELL 85
IV++C RS +NR TA ++L
Sbjct: 269 IVVQCQNDRSQHKNRATAMKML 290
>gi|189196084|ref|XP_001934380.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187980259|gb|EDU46885.1| peptidyl-tRNA hydrolase domain containing protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 175
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPK---IDEKDIQERFVRGSGPGGQAVAKTNNCVVL 57
M IF R L L L + L +P + + D+ E F++GSGPGGQ + KT++ V L
Sbjct: 1 MRIFAR-LPLHRPLHTSHPLLSKSLPPRVPLPDSDLIENFLKGSGPGGQKINKTSSAVQL 59
Query: 58 THIPTGIVIKCHQSRSLSENRKTARELL 85
HIPTGIV+K +RS NRK AR +L
Sbjct: 60 KHIPTGIVVKYQDTRSREINRKMARRIL 87
>gi|320355124|ref|YP_004196463.1| peptide chain release factor 2 (bRF-2) [Desulfobulbus propionicus
DSM 2032]
gi|320123626|gb|ADW19172.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfobulbus
propionicus DSM 2032]
Length = 369
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS + +LD +I++KDI+ R SG GGQ V KT++ + +TH PTGI
Sbjct: 215 RRHTSFASVMVMP-ELDDDVEIEINDKDIRIDTYRASGSGGQHVNKTDSAIRITHFPTGI 273
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS N+ TA ++L+A
Sbjct: 274 VVQCQNERSQHSNKATAMKMLMA 296
>gi|330941932|ref|XP_003306099.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
gi|311316572|gb|EFQ85807.1| hypothetical protein PTT_19132 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 1 MSIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHI 60
M I R L + L K +VP + + D+ E F++GSGPGGQ + KT++ V L HI
Sbjct: 1 MRILTRPLHTSHPLLSKSL--PPRVP-LPDSDLIENFLKGSGPGGQKINKTSSAVQLKHI 57
Query: 61 PTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDS 98
PTGIV+K +RS NRK AR +L + + GED+
Sbjct: 58 PTGIVVKYQDTRSREINRKMARRILQDRIEELQLGEDA 95
>gi|209964906|ref|YP_002297821.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
gi|209958372|gb|ACI99008.1| peptide chain release factor 2 PrfB [Rhodospirillum centenum SW]
Length = 319
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D V +I+EKD++ R SG GGQ V KT++ V LTH+PTGI
Sbjct: 156 RRHTSFASVSVTPV-IDDRIVVEINEKDVKVDTYRSSGAGGQHVNKTDSAVRLTHLPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A ++L A
Sbjct: 215 VVACQQERSQHKNRAKAWDMLRA 237
>gi|406988411|gb|EKE08419.1| hypothetical protein ACD_17C00173G0003 [uncultured bacterium]
Length = 130
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D+ E+F+ G+G GGQ + KT+NCV L H+PTGI IKC ++RS NR AR L
Sbjct: 16 LQEGDLIEKFILGTGKGGQKINKTSNCVYLKHLPTGIEIKCQKTRSQKLNRLYARRALCE 75
Query: 88 QWDVQVNGEDS 98
+ ++ + E S
Sbjct: 76 EVEMGLLQEKS 86
>gi|325266606|ref|ZP_08133283.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
gi|324982049|gb|EGC17684.1| peptide chain release factor RF2 [Kingella denitrificans ATCC
33394]
Length = 367
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADVRTDTYRASGAGGQHINKTDSAVRMTHIPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS ENR+ E+L A+ ++R+ +E+++A +E K
Sbjct: 273 VVQSQNSRSQHENRRVCEEMLRAKL---------FELEMRKRNEEKQALEEGK 316
>gi|261326766|emb|CBH09739.1| peptide chain release factor 1, putative [Trypanosoma brucei
gambiense DAL972]
Length = 459
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 42/61 (68%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 306 VHERDCNIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVAQ 365
Query: 88 Q 88
Q
Sbjct: 366 Q 366
>gi|452943243|ref|YP_007499408.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
gi|452881661|gb|AGG14365.1| peptide chain release factor 2 [Hydrogenobaculum sp. HO]
Length = 375
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 26/118 (22%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS L VP+++E +D++ R SG GGQ V KT+ V
Sbjct: 208 RRHTSFASVLV---------VPEVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVR 258
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQ 114
+THIPTGIV+ C Q RS +NR+ A E+L A+ ++++I+EK+++ +
Sbjct: 259 ITHIPTGIVVACQQERSQIQNRRKAMEMLKARL---------YQLELQKIEEKKKSLE 307
>gi|340052569|emb|CCC46850.1| putative peptide chain release factor 1, fragment [Trypanosoma
vivax Y486]
Length = 334
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A +++
Sbjct: 180 NIHESDCAIEFVRGSGPGGQGMQSSSNAVCLTHKPSGISVKCHQSRSALGNKELALQMVA 239
Query: 87 AQ 88
Q
Sbjct: 240 QQ 241
>gi|451846562|gb|EMD59871.1| hypothetical protein COCSADRAFT_40352 [Cochliobolus sativus ND90Pr]
Length = 183
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E D+ E F++GSGPGGQ + KT++ V L HIPTGIV+K +RS NRK AR +L +
Sbjct: 45 ESDLIENFLKGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSREINRKMARRILQDRI 104
Query: 90 DVQVNGEDS 98
+ GED+
Sbjct: 105 EEMELGEDA 113
>gi|195952400|ref|YP_002120690.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
gi|195932012|gb|ACG56712.1| peptide chain release factor 2 [Hydrogenobaculum sp. Y04AAS1]
Length = 375
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 64/118 (54%), Gaps = 26/118 (22%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS L VP+++E +D++ R SG GGQ V KT+ V
Sbjct: 208 RRHTSFASVLV---------VPEVNEDVNIEIKEEDLRIDTYRASGAGGQYVNKTDTAVR 258
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQ 114
+THIPTGIV+ C Q RS +NR+ A E+L A+ ++++I+EK+++ +
Sbjct: 259 ITHIPTGIVVACQQERSQIQNRRKAMEMLKARL---------YQLELQKIEEKKKSLE 307
>gi|350636142|gb|EHA24502.1| hypothetical protein ASPNIDRAFT_137541 [Aspergillus niger ATCC
1015]
Length = 139
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 27 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 86
Query: 87 AQWDVQVNGEDS 98
+ + ++G+ S
Sbjct: 87 DKVEELLHGDQS 98
>gi|338732935|ref|YP_004671408.1| putative peptide chain release factor 1 [Simkania negevensis Z]
gi|336482318|emb|CCB88917.1| putative peptide chain release factor 1 [Simkania negevensis Z]
Length = 138
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ GSG GGQ V KT +CV L HIPT I +KC Q RS NR AR L
Sbjct: 20 IREDDLLEKFILGSGKGGQKVNKTASCVYLKHIPTHIEVKCQQDRSREMNRFLARRELCE 79
Query: 88 QWDVQVNGEDSLNAQI 103
Q +++ E + Q+
Sbjct: 80 QIASKIHQEKTAKKQL 95
>gi|145250303|ref|XP_001396665.1| peptidyl-tRNA hydrolase domain protein [Aspergillus niger CBS
513.88]
gi|134082184|emb|CAL00939.1| unnamed protein product [Aspergillus niger]
Length = 198
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 49/72 (68%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI + D+ +++G+GPGGQ + KTN+ V + H PTG+V+K +RS S+N K AR+LL
Sbjct: 44 KIQDADVTVSYLKGTGPGGQKINKTNSAVQIIHKPTGVVVKSQATRSRSQNEKIARQLLA 103
Query: 87 AQWDVQVNGEDS 98
+ + ++G+ S
Sbjct: 104 DKVEELLHGDQS 115
>gi|295798158|emb|CAX69014.1| peptide chain release factor class A (=1), fragment [uncultured
bacterium]
Length = 170
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 41/63 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D++ERFVR GPGGQ + K + CV L H +GI IKC R+ S NR AR LLV+
Sbjct: 53 IREPDLEERFVRSRGPGGQNINKVSTCVYLKHRTSGIEIKCQSQRTQSANRIAARALLVS 112
Query: 88 QWD 90
+ +
Sbjct: 113 KIE 115
>gi|347736698|ref|ZP_08869272.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
gi|346919737|gb|EGY01135.1| peptide chain release factor 2 PrfB [Azospirillum amazonense Y2]
Length = 319
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ +D V +I+EKD++ R SG GGQ V KT++ V LTH+PTGI
Sbjct: 156 RRHTSF-SSVSVTPVIDDKIVVEINEKDVRVDTYRASGAGGQHVNKTDSAVRLTHMPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A ++L A
Sbjct: 215 VVACQQERSQHKNRSKAWDMLRA 237
>gi|375091094|ref|ZP_09737395.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
gi|374564456|gb|EHR35749.1| peptide chain release factor 2 [Helcococcus kunzii ATCC 51366]
Length = 349
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++D+ +IDEKD++ R SG GGQ V T++ V +THIPTG+
Sbjct: 192 RRHTSFASVDVYP-EIDHDTEIEIDEKDLRIDTYRSSGAGGQHVNTTDSAVRITHIPTGV 250
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
+ C RS +NR+TA +L A+
Sbjct: 251 TVSCQTERSQIQNRETAMSMLKAK 274
>gi|295398527|ref|ZP_06808561.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
gi|294973250|gb|EFG49043.1| peptide chain release factor RF2 [Aerococcus viridans ATCC 11563]
Length = 353
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS LD + +IDE DI+ R SG GGQ + KT++ V LTH+PTGI
Sbjct: 195 RRHTSFASVEIMPV-LDQNTEIEIDESDIEMDVFRASGAGGQHINKTSSAVRLTHVPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA ++L A+
Sbjct: 254 VVASQGQRSQFQNRDTAMKMLQAK 277
>gi|386747633|ref|YP_006220841.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
gi|384553875|gb|AFI05631.1| peptide chain release factor 2 [Helicobacter cetorum MIT 99-5656]
Length = 363
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD +IDEKD++ + R SG GGQ V KT + V +TH PTGI
Sbjct: 211 KRHTSFASVQISP-ELDDGIDIEIDEKDVRYDYYRASGAGGQHVNKTESAVRITHFPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ +A ++L
Sbjct: 270 VVQCQNDRSQHKNKASALKML 290
>gi|433602857|ref|YP_007035226.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
gi|407880710|emb|CCH28353.1| Peptide chain release factor 2 [Saccharothrix espanaensis DSM
44229]
Length = 365
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L A
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQA 291
Query: 88 Q 88
+
Sbjct: 292 K 292
>gi|169597527|ref|XP_001792187.1| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
gi|160707538|gb|EAT91198.2| hypothetical protein SNOG_01549 [Phaeosphaeria nodorum SN15]
Length = 236
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 52/75 (69%), Gaps = 1/75 (1%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
+VP + + DI E+F+ GSGPGGQ + KT++ V L HIPTGIV+K +RS + NRK AR+
Sbjct: 38 RVP-LPDSDIIEKFLHGSGPGGQKINKTSSAVQLKHIPTGIVVKYQDTRSRTVNRKMARK 96
Query: 84 LLVAQWDVQVNGEDS 98
+L + + G+D+
Sbjct: 97 ILQERIEEAELGDDA 111
>gi|451945828|ref|YP_007466423.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
gi|451905176|gb|AGF76770.1| bacterial peptide chain release factor 2 (bRF-2) [Desulfocapsa
sulfexigens DSM 10523]
Length = 330
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS + +LD + IDEKD++ R SG GGQ V KT++ + +THIP+G+
Sbjct: 176 RRHTSFASVMVMP-ELDDTIDVDIDEKDLRVDTYRASGSGGQHVNKTDSAIRITHIPSGV 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A ++L +
Sbjct: 235 VVQCQNERSQHRNRDMAMKMLAS 257
>gi|225025532|ref|ZP_03714724.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
gi|224941678|gb|EEG22887.1| hypothetical protein EIKCOROL_02432 [Eikenella corrodens ATCC
23834]
Length = 367
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADVRTDTFRASGAGGQHINKTDSAVRMTHIPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS +NR+ E+L A+ ++R+ +E+++A +E K
Sbjct: 273 VVQSQNSRSQHDNRRVCEEMLRAKL---------FELEMRKRNEEKQALEEGK 316
>gi|342180140|emb|CCC89616.1| putative peptide chain release factor 1 [Trypanosoma congolense
IL3000]
Length = 444
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ A + +
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPSGISVKCHQSRSALGNKELALQTVAQ 350
Query: 88 Q 88
Q
Sbjct: 351 Q 351
>gi|363750438|ref|XP_003645436.1| hypothetical protein Ecym_3111 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889070|gb|AET38619.1| Hypothetical protein Ecym_3111 [Eremothecium cymbalariae
DBVPG#7215]
Length = 186
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 65/105 (61%), Gaps = 11/105 (10%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
E++++E F+ G GPGGQ + K N+ V L H+P+GIV++C ++RS NRK AR+ L A+
Sbjct: 57 EQEVEETFLHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRENNRKLARQKLAAK 116
Query: 89 WDVQVNGEDSLN---------AQIRRIDEKRRATQEQKKRKLDAL 124
+ NG+ +L AQ +R K ++ Q+ ++ KLD+L
Sbjct: 117 IAIWNNGDKALERDLALQQWVAQGKRSKHK-KSRQKHEQAKLDSL 160
>gi|297181318|gb|ADI17509.1| protein chain release factor b [uncultured bacterium HF0130_06E03]
Length = 325
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 3/108 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F D+D + ++D++ R G GGQ V KT++ V +TH+PTGI
Sbjct: 172 RRHTSFAS-VFVYPDVDDDIEVDLKDEDLKIEVYRAGGAGGQHVNKTSSAVRITHVPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRA 112
V++C RS +N+ TA ++L A+ V N +D N +++ ++ +++
Sbjct: 231 VVQCQNERSQFKNKATALKVLTAR--VYQNIKDEENKKLKEVENSKKS 276
>gi|374587319|ref|ZP_09660411.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
gi|373876180|gb|EHQ08174.1| bacterial peptide chain release factor 2 (bRF-2) [Leptonema illini
DSM 21528]
Length = 391
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I+EKD++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 224 RRHTSFASVHISP-ELDDSVNVLIEEKDLRVDTYRASGAGGQHVNKTDSAIRITHIPTGI 282
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR A ++L A
Sbjct: 283 VVQCQNERSQHKNRDRAMKMLKA 305
>gi|392901267|ref|NP_001255660.1| Protein T23B5.4, isoform b [Caenorhabditis elegans]
gi|313004792|emb|CBY25203.1| Protein T23B5.4, isoform b [Caenorhabditis elegans]
Length = 149
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 35 ERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVN 94
++++ G GPGGQ V N V LTH+PTG V+K H+SR L +N A E + D Q+N
Sbjct: 50 QKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVHESRLLPKNIDIAFERMKFVLDRQIN 109
Query: 95 GEDSLNAQIRRI 106
GE+ Q++R+
Sbjct: 110 GENCYEEQLKRL 121
>gi|291439311|ref|ZP_06578701.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
gi|291342206|gb|EFE69162.1| peptide chain release factor 2 [Streptomyces ghanaensis ATCC 14672]
Length = 368
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ V T++ V +THIPTGIV+ C RS +NR TA +L A
Sbjct: 233 IDESDLRVDVYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQA 292
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
++ E+RR ++++ K+DALK
Sbjct: 293 -----------------KLLERRR---QEEQAKMDALK 310
>gi|289549137|ref|YP_003474125.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
gi|289182754|gb|ADC89998.1| peptide chain release factor 2 [Thermocrinis albus DSM 14484]
Length = 372
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 62/121 (51%), Gaps = 26/121 (21%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS + VP+IDE +DI+ R SG GGQ V KT+ V
Sbjct: 209 RRHTSFAS---------VTVVPQIDESINIEIREEDIEMETFRASGAGGQYVNKTDTAVR 259
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQ 116
+ H PTGIV+ C Q RS +NR A ELL A+ +++ ++EK+RA + +
Sbjct: 260 IRHKPTGIVVTCQQERSQYQNRMKALELLKAKL---------YQLKLQELEEKKRALEGE 310
Query: 117 K 117
K
Sbjct: 311 K 311
>gi|297568438|ref|YP_003689782.1| hypothetical protein DaAHT2_0457 [Desulfurivibrio alkaliphilus
AHT2]
gi|296924353|gb|ADH85163.1| conserved hypothetical protein [Desulfurivibrio alkaliphilus AHT2]
Length = 368
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +LD + +I++KD++ R SG GGQ V KT++ + +TH+P+GI
Sbjct: 214 RRHTSFAS-VFIFPELDDNIEVEINDKDLRIDTYRASGAGGQHVNKTSSAIRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ TA ++L AQ
Sbjct: 273 VVQCQNERSQHRNKDTAMKMLKAQ 296
>gi|453049954|gb|EME97515.1| peptide chain release factor 2 [Streptomyces mobaraensis NBRC 13819
= DSM 40847]
Length = 368
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE D++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|82539988|ref|XP_724342.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23478956|gb|EAA15907.1| hypothetical protein [Plasmodium yoelii yoelii]
Length = 172
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 3/61 (4%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG---IVIKCHQSRSLSENRKTAREL 84
I K+I+E F++G+G GGQ V KTNNCV++ + T IVIKCH+ R L +NR AREL
Sbjct: 72 ICPKNIEETFIKGTGKGGQKVNKTNNCVMIKYDRTNDDKIVIKCHKYRCLQQNRVYAREL 131
Query: 85 L 85
L
Sbjct: 132 L 132
>gi|294658124|ref|XP_460455.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
gi|202952893|emb|CAG88762.2| DEHA2F02090p [Debaryomyces hansenii CBS767]
Length = 180
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Query: 28 IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
I E++I E F++G GPGGQ + K+N+ V LTH PTG+V+ C SRS +NRK ARE+L
Sbjct: 38 IVEEEIDEAFLKGGRGPGGQKINKSNSKVQLTHKPTGLVVTCQYSRSQEQNRKRAREILA 97
Query: 87 AQWDVQVNGE 96
+ D N E
Sbjct: 98 LKLDELQNPE 107
>gi|331695045|ref|YP_004331284.1| peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
gi|326949734|gb|AEA23431.1| Peptide chain release factor 2 [Pseudonocardia dioxanivorans
CB1190]
Length = 369
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L A
Sbjct: 232 IDEKDLRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMVVLQA 291
Query: 88 Q 88
+
Sbjct: 292 K 292
>gi|156837376|ref|XP_001642715.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113276|gb|EDO14857.1| hypothetical protein Kpol_345p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 162
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 66/120 (55%), Gaps = 19/120 (15%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK---DIQERFVRGS-GPGGQAVAKTNNCVVLTHI 60
R +L +L +K L PK +E+ + E F+ G GPGGQ + K+N+ V L HI
Sbjct: 7 RNFSALTINLIKKNKLPPR--PKFNEQLETECTESFMHGGRGPGGQKINKSNSKVQLKHI 64
Query: 61 PTGIVIKCHQSRSLSENRKTARELLVAQWD-----VQVNGEDSLNAQIRRIDEKRRATQE 115
PTGIV++C ++RS +NRK ARE + + ++VNGE I E+ +A QE
Sbjct: 65 PTGIVVECQETRSRDQNRKIAREKMALAIERFRNGIEVNGEV--------ISEREKAVQE 116
>gi|121703728|ref|XP_001270128.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
gi|119398272|gb|EAW08702.1| peptidyl-tRNA hydrolase domain protein [Aspergillus clavatus NRRL
1]
Length = 203
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 50/75 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI++ D+ +++G+GPGGQ + KTN+ V L H PTG+V+K +RS S+N K AR++L
Sbjct: 45 KINDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQILA 104
Query: 87 AQWDVQVNGEDSLNA 101
+ + G++S A
Sbjct: 105 DKVEELQKGDESRRA 119
>gi|33859720|ref|NP_082586.1| probable peptide chain release factor C12orf65 homolog,
mitochondrial isoform b [Mus musculus]
gi|26333153|dbj|BAC30294.1| unnamed protein product [Mus musculus]
gi|148687648|gb|EDL19595.1| RIKEN cDNA 2810006K23, isoform CRA_a [Mus musculus]
Length = 128
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
DY + ++E +++E+FV+G GPGGQA KT+NCVVL H+P+GIV+K E R
Sbjct: 51 DYPALLPLNESELEEQFVKGHGPGGQATNKTSNCVVLKHVPSGIVVKVETG---GEPRSA 107
Query: 81 ARELLVAQWDVQVNGEDSLNA 101
A +QW D+ N+
Sbjct: 108 ATAGF-SQWACPFWHGDTANS 127
>gi|256545449|ref|ZP_05472811.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
gi|256398845|gb|EEU12460.1| peptide chain release factor 2, programmed [Anaerococcus vaginalis
ATCC 51170]
Length = 369
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPTG
Sbjct: 213 RRHTSFASVDIFPELNDDMS--VEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 270
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
++ RS ++N++TA +LL+A+
Sbjct: 271 VIASSQAERSQTQNKETAMKLLLAK 295
>gi|90020863|ref|YP_526690.1| peptide chain release factor 2 [Saccharophagus degradans 2-40]
gi|89950463|gb|ABD80478.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharophagus
degradans 2-40]
Length = 347
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D + +I++ D++E R SG GGQ V KT++ V LTH PTGI
Sbjct: 194 RRHTSF-SSVFVSPEIDDNIDIEINKADVREDTYRASGAGGQHVNKTDSAVRLTHAPTGI 252
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A ++L A
Sbjct: 253 VVQCQSERSQHSNRDKAWKMLRA 275
>gi|85860191|ref|YP_462393.1| peptide chain release factor [Syntrophus aciditrophicus SB]
gi|85723282|gb|ABC78225.1| peptide chain release factor [Syntrophus aciditrophicus SB]
Length = 136
Score = 67.8 bits (164), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 35/50 (70%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
I E D++E F+R SGPGGQ V KT CV L H+PTG+ +KC Q RS + N
Sbjct: 20 ISEDDLRETFIRSSGPGGQNVNKTATCVYLVHLPTGLSVKCQQDRSQTVN 69
>gi|444320065|ref|XP_004180689.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS 6284]
gi|387513732|emb|CCH61170.1| hypothetical protein TBLA_0E01100 [Tetrapisispora blattae CBS 6284]
Length = 171
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 14/91 (15%)
Query: 10 LASSLFRKYDLDYSKV----------PKI---DEKDIQERFVRGS-GPGGQAVAKTNNCV 55
+ L R +++ KV PK+ DE DI+E F+ G GPGGQ + KTN+ V
Sbjct: 10 ITKPLCRNFNIQNGKVLIKKNKFPPRPKLGADDENDIEETFLHGGRGPGGQKINKTNSKV 69
Query: 56 VLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
L H+P+G++I C ++RS + NR ARE L
Sbjct: 70 QLKHLPSGVIITCQETRSRARNRDIAREKLA 100
>gi|344258847|gb|EGW14951.1| Uncharacterized protein C12orf65-like [Cricetulus griseus]
Length = 101
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/53 (52%), Positives = 38/53 (71%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRS 73
DY + + E +++E+FV+G GPGGQA KTNNCVVL H+P+GIV+K S
Sbjct: 47 DYPALLPLHESELEEQFVKGHGPGGQATNKTNNCVVLKHVPSGIVVKVDSGGS 99
>gi|343473565|emb|CCD14577.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 474
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/61 (49%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E+D FVRGSGPGGQ + ++N V LTH P+GI +KCHQSRS N++ + + +
Sbjct: 291 IHEEDCNIEFVRGSGPGGQGMQSSSNAVCLTHRPSGISVKCHQSRSALGNKELSLQTVAQ 350
Query: 88 Q 88
Q
Sbjct: 351 Q 351
>gi|325849490|ref|ZP_08170771.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
gi|325480110|gb|EGC83185.1| peptide chain release factor 2 [Anaerococcus hydrogenalis
ACS-025-V-Sch4]
Length = 369
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPTG
Sbjct: 213 RRHTSFASIDIFPELNDDMS--VEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 270
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
++ RS ++N++TA +LL+A+
Sbjct: 271 VIASSQAERSQTQNKETAMKLLLAK 295
>gi|297588165|ref|ZP_06946809.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
gi|297574854|gb|EFH93574.1| peptide chain release factor RF2 [Finegoldia magna ATCC 53516]
Length = 329
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F ++ S +ID+KD++ R SG GGQ V T++ V +THIPTG
Sbjct: 176 RRHTSFASVDVFP--EIKDSHNIQIDDKDLKVDTYRASGAGGQHVNMTDSAVRITHIPTG 233
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+ ++C RS NRK A ++L+A+
Sbjct: 234 VTVQCQTERSQIANRKYAMDMLIAK 258
>gi|257459323|ref|ZP_05624436.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
gi|257443252|gb|EEV18382.1| peptide chain release factor 2 [Campylobacter gracilis RM3268]
Length = 365
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ +L+ I+EKDI+ R SG GGQ + KT + V +THIPTGI
Sbjct: 211 RRHTSF-SSVMVSPELNDDIEINIEEKDIRVDVFRASGAGGQHINKTESAVRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +N++TA ++L
Sbjct: 270 VVNCQNDRSQHKNKETAMKVL 290
>gi|183219678|ref|YP_001837674.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
gi|189909814|ref|YP_001961369.1| peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167774490|gb|ABZ92791.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167778100|gb|ABZ96398.1| Peptide chain release factor 2 [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Paris)']
Length = 375
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ ++D I+EKD++ R SG GGQ V T++ V +THIPTG+
Sbjct: 213 RRHTSFAS-VYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGV 271
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 272 VVSCQMERSQIKNRDTAMKMLKA 294
>gi|15606882|ref|NP_214263.1| peptide chain release factor 2 [Aquifex aeolicus VF5]
gi|6225943|sp|O67695.1|RF2_AQUAE RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|2984119|gb|AAC07656.1| peptide chain release factor RF-2 [Aquifex aeolicus VF5]
Length = 373
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ S +P+IDE +D++ R SG GGQ V KT+ V
Sbjct: 210 RRHTSFAAV---------SVMPQIDEDIKIEIKPEDLKIETFRASGAGGQYVNKTDTAVR 260
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+THIPTGI + C Q RS +N++ A ELL A+
Sbjct: 261 ITHIPTGITVSCQQERSQYQNKRKALELLKAK 292
>gi|255718823|ref|XP_002555692.1| KLTH0G15158p [Lachancea thermotolerans]
gi|238937076|emb|CAR25255.1| KLTH0G15158p [Lachancea thermotolerans CBS 6340]
Length = 155
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%), Gaps = 7/71 (9%)
Query: 26 PKID---EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
PK+ E +++E+F+ G GPGGQ + K N+ V L H+P+GIV++C ++RS +NRK A
Sbjct: 26 PKLSTQMETELEEKFLHGGRGPGGQKINKCNSKVQLKHLPSGIVVECQETRSRDQNRKLA 85
Query: 82 RE---LLVAQW 89
RE L +AQW
Sbjct: 86 REKLALRIAQW 96
>gi|256375089|ref|YP_003098749.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
gi|255919392|gb|ACU34903.1| peptide chain release factor 2 [Actinosynnema mirum DSM 43827]
Length = 367
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEK+++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 231 EIDEKELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQLQNKATAMAVLQ 290
Query: 87 AQ 88
A+
Sbjct: 291 AK 292
>gi|238020780|ref|ZP_04601206.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
gi|237867760|gb|EEP68766.1| hypothetical protein GCWU000324_00670 [Kingella oralis ATCC 51147]
Length = 367
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGI
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRITHLPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS ENR+ E+L A+ ++R+ +E+++A +E K
Sbjct: 273 VVQSQSSRSQHENRRIVMEMLRAKL---------FELEMRKRNEEKQALEEGK 316
>gi|50287521|ref|XP_446190.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525497|emb|CAG59114.1| unnamed protein product [Candida glabrata]
Length = 187
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 26 PKID---EKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
PK D E DI+E+F+ G +GPGGQ + K N+ V + H+P+ IV+ C +RS +NRK A
Sbjct: 41 PKFDASMEADIEEKFLHGGTGPGGQKINKCNSKVQIKHVPSNIVVTCQATRSRDQNRKIA 100
Query: 82 RELLVAQWD-VQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
RE L + + Q+ E N+ ++ + E+ +A E K+++
Sbjct: 101 REKLALELERWQLGQEKDGNSGVQVMTEREQALLEWKRQQ 140
>gi|429743488|ref|ZP_19277042.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
gi|429165271|gb|EKY07336.1| peptide chain release factor 2 [Neisseria sp. oral taxon 020 str.
F0370]
Length = 367
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 214 KRHTSFAS-VFVYPEVDDSFEVEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS ENR+ E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQSQSSRSQHENRRIVMEMLRSKL---------FELEMRKRNEEKQALEEGK 316
>gi|357038237|ref|ZP_09100035.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
gi|355359812|gb|EHG07572.1| Peptide chain release factor 2 [Desulfotomaculum gibsoniae DSM
7213]
Length = 329
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 61/101 (60%), Gaps = 2/101 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D V +ID +D++ R G GGQ V KT++ V +TH+PTGI
Sbjct: 172 RRHTSFASVDVLPEVQDDIDV-QIDPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQIR 104
V++C RS NR TA +LL A+ +D+++ +D+ AQ+R
Sbjct: 231 VVQCQNERSQLSNRNTAMKLLKAKLFDLEMQKKDAELAQMR 271
>gi|85859385|ref|YP_461587.1| peptide chain release factor 2 [Syntrophus aciditrophicus SB]
gi|85722476|gb|ABC77419.1| bacterial peptide Chain Release Factor 2 (RF-2) [Syntrophus
aciditrophicus SB]
Length = 279
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +++ V +IDEKD++ R +G GGQ V KT++ V +TH+PTGI
Sbjct: 127 RRHTSFAS-VFVYPEVNDEIVVEIDEKDLRIDTYRSTGAGGQHVNKTDSAVRITHMPTGI 185
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ A + L
Sbjct: 186 VVQCQNERSQHKNKAMAMKYL 206
>gi|354594597|ref|ZP_09012636.1| peptide chain release factor 2 [Commensalibacter intestini A911]
gi|353672273|gb|EHD13973.1| peptide chain release factor 2 [Commensalibacter intestini A911]
Length = 348
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D S I+E D++ R SG GGQ + KT + + +TH+PTGI
Sbjct: 182 RRHTSFASVWVYPV-IDDSIQIDINESDLKVDTYRASGAGGQHINKTESAIRITHVPTGI 240
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA E+L A
Sbjct: 241 VVACQNDRSQHRNRATAMEMLKA 263
>gi|333374725|ref|ZP_08466560.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|381400380|ref|ZP_09925350.1| peptide chain release factor 2 [Kingella kingae PYKK081]
gi|332974657|gb|EGK11574.1| peptide chain release factor RF2 [Kingella kingae ATCC 23330]
gi|380834600|gb|EIC14435.1| peptide chain release factor 2 [Kingella kingae PYKK081]
Length = 367
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 214 KRHTSF-SSVFVYPEVDDSFEVEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS ENR+ E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQSQSSRSQHENRRIVMEMLRSKL---------FELEMRKRNEEKQALEEGK 316
>gi|324997823|ref|ZP_08118935.1| peptide chain release factor 2 [Pseudonocardia sp. P1]
Length = 368
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKD++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 231 EIDEKDLRVDVFRASGPGGQGVNTTDSAVRLTHIPTGIVVACQNERSQLQNKASAMVVLQ 290
Query: 87 AQ 88
A+
Sbjct: 291 AK 292
>gi|373852836|ref|ZP_09595636.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391229432|ref|ZP_10265638.1| protein chain release factor B [Opitutaceae bacterium TAV1]
gi|372475065|gb|EHP35075.1| Class I peptide chain release factor [Opitutaceae bacterium TAV5]
gi|391219093|gb|EIP97513.1| protein chain release factor B [Opitutaceae bacterium TAV1]
Length = 136
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%), Gaps = 9/71 (12%)
Query: 20 LDYSKVPKIDEK---------DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQ 70
+D S +I E+ D++ERFVRGSGPGGQ + KT++ V L H PTG+ ++C +
Sbjct: 1 MDVSGQSQIQERLDALGVLPGDVEERFVRGSGPGGQKINKTSSTVCLRHAPTGVEVRCQR 60
Query: 71 SRSLSENRKTA 81
RS + NR+ A
Sbjct: 61 ERSQAANREAA 71
>gi|34496516|ref|NP_900731.1| peptide chain release factor 2 [Chromobacterium violaceum ATCC
12472]
gi|34102370|gb|AAQ58736.1| peptide chain release factor RF-2 [Chromobacterium violaceum ATCC
12472]
Length = 299
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 146 RRHTSF-SSVFVYPEVDDSFEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 204
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR A ++L A+
Sbjct: 205 VVQCQNDRSQHRNRDEAWQMLRAK 228
>gi|408792601|ref|ZP_11204211.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
gi|408464011|gb|EKJ87736.1| peptide chain release factor 2 [Leptospira meyeri serovar Hardjo
str. Went 5]
Length = 375
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ ++D I+EKD++ R SG GGQ V T++ V +THIPTG+
Sbjct: 213 RRHTSFAS-VYVTPEVDDDIQVNIEEKDLRVDVYRSSGAGGQHVNTTDSAVRITHIPTGV 271
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 272 VVSCQMERSQIKNRDTAMKMLRA 294
>gi|302544934|ref|ZP_07297276.1| peptide chain release factor 2 [Streptomyces hygroscopicus ATCC
53653]
gi|302462552|gb|EFL25645.1| peptide chain release factor 2 [Streptomyces himastatinicus ATCC
53653]
Length = 370
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +NR TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNRATAMNVL- 290
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
Q + +D +R ++++ K+DALK
Sbjct: 291 ---------------QAKLLDRRR----QEEQAKMDALK 310
>gi|255020528|ref|ZP_05292592.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
gi|254970048|gb|EET27546.1| peptide chain release factor 2 [Acidithiobacillus caldus ATCC
51756]
Length = 349
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ V LTHIPTGI
Sbjct: 196 RRHTSFAS-VFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR A +L
Sbjct: 255 VVACQTDRSQHKNRAEAMRML 275
>gi|329896805|ref|ZP_08271721.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
gi|328921560|gb|EGG28940.1| peptide chain release factor 2 [gamma proteobacterium IMCC3088]
Length = 321
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ V LTH+PTG+
Sbjct: 167 RRHTSFAS-VFVSPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGV 225
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR A +LL
Sbjct: 226 VVQCQTERSQHQNRDNAMKLL 246
>gi|340781058|ref|YP_004747665.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
gi|340555211|gb|AEK56965.1| peptide chain release factor 2 [Acidithiobacillus caldus SM-1]
Length = 349
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ V LTHIPTGI
Sbjct: 196 RRHTSFAS-VFVYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAVRLTHIPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR A +L
Sbjct: 255 VVACQTDRSQHKNRAEAMRML 275
>gi|388457040|ref|ZP_10139335.1| hypothetical protein FdumT_10727 [Fluoribacter dumoffii Tex-KL]
Length = 134
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ ++ E D+ E+F+ GSG GGQ + KT + V L HIP+G+ IKC +SRS +NR
Sbjct: 12 DFMAKLQVHETDLIEKFIIGSGKGGQKLHKTASTVYLKHIPSGLEIKCQESRSREDNRYF 71
Query: 81 ARELLVAQWDVQVNGEDSLNAQ 102
AR L + QV E + Q
Sbjct: 72 ARIRLCEKLHSQVTDEKTKEQQ 93
>gi|329120730|ref|ZP_08249392.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
gi|327460527|gb|EGF06863.1| peptide chain release factor RF2 [Neisseria bacilliformis ATCC
BAA-1200]
Length = 417
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 264 KRHTSFAS-VFVYPEVDDSFEIEINPADLRTDTYRASGAGGQHINKTDSAVRITHIPTGI 322
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++ SRS ENR+ E+L ++ ++R+ +E+++A +E K
Sbjct: 323 VVQSQSSRSQHENRRIVMEMLRSKL---------FELEMRKRNEEKQALEEGK 366
>gi|452993792|emb|CCQ94608.1| Peptide chain release factor 2 [Clostridium ultunense Esp]
Length = 346
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ + D D +I+E DI+ R SG GGQ V T++ V +THIPTG
Sbjct: 191 RRHTSFASIDIYPELDDDMD--IEINESDIKIDTYRASGAGGQHVNTTDSAVRVTHIPTG 248
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
I+++C RS NR TA ++L A+
Sbjct: 249 IIVQCQNERSQHSNRLTAMKMLKAK 273
>gi|256821963|ref|YP_003145926.1| peptide chain release factor 2 [Kangiella koreensis DSM 16069]
gi|256795502|gb|ACV26158.1| bacterial peptide chain release factor 2 (bRF- 2) [Kangiella
koreensis DSM 16069]
Length = 365
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S +++ D++ R SG GGQ V KT++ + LTHIPTGI
Sbjct: 212 RRHTSFAS-VFVYPEVDDSIDIEVNPADLRVDTYRASGAGGQHVNKTDSAIRLTHIPTGI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +NR A ++ A+
Sbjct: 271 VVQCQNDRSQHKNRAQAMSMMKAK 294
>gi|158321505|ref|YP_001514012.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
gi|158141704|gb|ABW20016.1| peptide chain release factor 2 [Alkaliphilus oremlandii OhILAs]
Length = 340
Score = 66.6 bits (161), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 53/84 (63%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D S +I+ D++ R SG GGQ V KT++ V +THIPTGI
Sbjct: 182 KRHTSFASVDVMP-EIDDSVDIQINPNDLRIDTYRASGSGGQHVNKTDSAVRITHIPTGI 240
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR+TA ++L+++
Sbjct: 241 VVQCQNERSQHSNRETAMKMLISK 264
>gi|402310432|ref|ZP_10829398.1| peptide chain release factor 2 [Eubacterium sp. AS15]
gi|400368884|gb|EJP21891.1| peptide chain release factor 2 [Eubacterium sp. AS15]
Length = 316
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S +I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 161 KRHTSFASVDVLP-ELDDSINVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGV 219
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR+TA ++L A+
Sbjct: 220 VVQCQNERSQISNRETAMKMLTAK 243
>gi|383643884|ref|ZP_09956290.1| peptide chain release factor 2 [Streptomyces chartreusis NRRL
12338]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +NR TA +L A
Sbjct: 233 IDESELRVDVYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNRATAMNVLQA 292
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
++ E+RR ++++ K+DALK
Sbjct: 293 -----------------KLLERRR---QEEQAKMDALK 310
>gi|375107033|ref|ZP_09753294.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
gi|374667764|gb|EHR72549.1| peptide chain release factor 2 [Burkholderiales bacterium
JOSHI_001]
Length = 367
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 274 VQCQNDRSQHRNRDEAWQML 293
>gi|329936498|ref|ZP_08286234.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
gi|329304013|gb|EGG47895.1| peptide chain release factor 2 [Streptomyces griseoaurantiacus
M045]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|212697040|ref|ZP_03305168.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
gi|212675815|gb|EEB35422.1| hypothetical protein ANHYDRO_01605 [Anaerococcus hydrogenalis DSM
7454]
Length = 238
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + + D S +ID KD++ R SG GGQ V KT++ V +THIPTG
Sbjct: 83 RRHTSFASIDIFPELNDDMS--VEIDPKDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 140
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
++ RS ++N++TA +LL+A+
Sbjct: 141 VIASSQAERSQTQNKETAMKLLLAK 165
>gi|302551795|ref|ZP_07304137.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
gi|302469413|gb|EFL32506.1| peptide chain release factor 2 [Streptomyces viridochromogenes DSM
40736]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|154148037|ref|YP_001406088.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
gi|238686699|sp|A7I0P7.1|RF2_CAMHC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|153804046|gb|ABS51053.1| peptide chain release factor 2 [Campylobacter hominis ATCC BAA-381]
Length = 364
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS + +LD IDEKD++ + R SG GGQ V KT + V +THIPT I
Sbjct: 211 RRHTSFASVVVSP-ELDDDIQINIDEKDLRIDYYRSSGAGGQHVNKTESAVRITHIPTNI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C R +N+ +A ++L
Sbjct: 270 VVQCQNDRDQHKNKASAMKVL 290
>gi|114776305|ref|ZP_01451350.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
gi|114553135|gb|EAU55533.1| peptide chain release factor 2 [Mariprofundus ferrooxydans PV-1]
Length = 372
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F D++ ID D++ R SG GGQ + KT++ V LTH+PT I
Sbjct: 213 RRHTSFAS-VFAYPDIEKDIEIDIDPSDVRTDTYRASGAGGQHINKTDSAVRLTHVPTNI 271
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR A +L A
Sbjct: 272 VVQCQNDRSQHKNRAAAWSMLKA 294
>gi|404216093|ref|YP_006670288.1| Protein chain release factor B [Gordonia sp. KTR9]
gi|403646892|gb|AFR50132.1| Protein chain release factor B [Gordonia sp. KTR9]
Length = 371
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVL-- 292
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
Q + +D KR ++++ +LDALK
Sbjct: 293 --------------QAKLLDRKR----QEERAELDALK 312
>gi|398785517|ref|ZP_10548476.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
gi|396994386|gb|EJJ05426.1| peptide chain release factor 2 [Streptomyces auratus AGR0001]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|377572554|ref|ZP_09801639.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
gi|377530326|dbj|GAB46804.1| peptide chain release factor 2 [Gordonia terrae NBRC 100016]
Length = 371
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 235 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVL-- 292
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
Q + +D KR ++++ +LDALK
Sbjct: 293 --------------QAKLLDRKR----QEERAELDALK 312
>gi|374853598|dbj|BAL56502.1| peptide chain release factor RF-2 [uncultured alpha
proteobacterium]
Length = 336
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D +ID KD++ R SG GGQ V +T++ V +THIPTGI
Sbjct: 156 RRHTSFASVWVWPV-VDEDVEIEIDPKDLRIDTYRASGAGGQHVNRTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR TA +L A
Sbjct: 215 VVQCQNDRSQHRNRATAMAMLKA 237
>gi|306820781|ref|ZP_07454406.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
gi|304551171|gb|EFM39137.1| peptide chain release factor RF2 [Eubacterium yurii subsp.
margaretiae ATCC 43715]
Length = 316
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S +I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 161 KRHTSFASVDVLP-ELDDSIKVEINPKDLKVDTYRSSGAGGQHVNKTESAIRITHIPTGV 219
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR+TA ++L A+
Sbjct: 220 VVQCQNERSQISNRETAMKMLTAK 243
>gi|380512649|ref|ZP_09856056.1| peptide chain release factor 2 [Xanthomonas sacchari NCPPB 4393]
Length = 302
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +TH+PTGI
Sbjct: 140 RRHTSF-TSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPTGI 198
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 199 VVACQTGRSQHQNRDNAMKMLAAK 222
>gi|441190704|ref|ZP_20970707.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
gi|440613705|gb|ELQ77097.1| peptide chain release factor 2 [Streptomyces rimosus subsp. rimosus
ATCC 10970]
Length = 370
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|21221417|ref|NP_627196.1| peptide chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289771299|ref|ZP_06530677.1| peptide chain release factor 2 [Streptomyces lividans TK24]
gi|19864260|sp|Q53915.2|RF2_STRCO RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|6912002|emb|CAB72218.1| chain release factor 2 [Streptomyces coelicolor A3(2)]
gi|289701498|gb|EFD68927.1| peptide chain release factor 2 [Streptomyces lividans TK24]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|1402638|dbj|BAA13170.1| PrfB [Streptomyces coelicolor]
Length = 368
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 59/109 (54%), Gaps = 24/109 (22%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK----KAWKER 131
A ++ E+RR ++++ K+DALK +W R
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALKGDGGNSWGNR 320
>gi|418475196|ref|ZP_13044622.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
gi|371544193|gb|EHN72927.1| peptide chain release factor 2 [Streptomyces coelicoflavus ZG0656]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 275
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 276 A-----------------KLLERRR---QEEQAKMDALK 294
>gi|297171258|gb|ADI22265.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0200_36I24]
gi|297171357|gb|ADI22361.1| protein chain release factor B [uncultured nuHF2 cluster bacterium
HF0500_02A10]
Length = 334
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D ++ +I E D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 172 RRHTSFASVFIYPLVDDEIEI-EIAESDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ C Q RS NR TA ++L A
Sbjct: 231 AVSCQQERSQHMNRATAMKMLQA 253
>gi|303235160|ref|ZP_07321780.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
gi|302493752|gb|EFL53538.1| peptide chain release factor 2 [Finegoldia magna BVS033A4]
Length = 329
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + ++ +ID+KD++ R SG GGQ V T++ V +THIPTG
Sbjct: 176 RRHTSFASVDVFPEIKDNHD--IQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTG 233
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+ ++C RS NRK A ++L+A+
Sbjct: 234 VTVQCQTERSQIANRKYAMDMLIAK 258
>gi|302380960|ref|ZP_07269421.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
gi|302311181|gb|EFK93201.1| peptide chain release factor 2 [Finegoldia magna ACS-171-V-Col3]
Length = 329
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + ++ +ID+KD++ R SG GGQ V T++ V +THIPTG
Sbjct: 176 RRHTSFASVDVFPEIKDNHD--IQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTG 233
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+ ++C RS NRK A ++L+A+
Sbjct: 234 VTVQCQTERSQIANRKYAMDMLIAK 258
>gi|297171663|gb|ADI22657.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0500_22O06]
Length = 356
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D ++ IDE D++ R SG GGQ V KT++ V +TH PTGI
Sbjct: 197 RRHTSFASVFIYPLVEDGIEI-DIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V C Q RS +NR TA ++L A
Sbjct: 256 VTTCQQERSQHKNRSTAMKMLRA 278
>gi|372489474|ref|YP_005029039.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
gi|359356027|gb|AEV27198.1| peptide chain release factor 2 [Dechlorosoma suillum PS]
Length = 367
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGI
Sbjct: 214 RRHTSF-TSVFVYPEVDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A ++L A
Sbjct: 273 VVQCQNDRSQHRNRDEAWQMLRA 295
>gi|237786018|ref|YP_002906723.1| peptide chain release factor 2 [Corynebacterium kroppenstedtii DSM
44385]
gi|237758930|gb|ACR18180.1| peptide chain release factor RF-2 [Corynebacterium kroppenstedtii
DSM 44385]
Length = 379
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 239 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAA 298
Query: 88 Q 88
+
Sbjct: 299 K 299
>gi|189485401|ref|YP_001956342.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
gi|170287360|dbj|BAG13881.1| peptidyl-tRNA hydrolase-like protein [uncultured Termite group 1
bacterium phylotype Rs-D17]
Length = 136
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
K+ E DI+E+F+R SG GGQ V K + V L H PTGI +KC + R NR AR LL
Sbjct: 22 KVQESDIEEKFIRSSGKGGQNVNKVSTTVYLKHYPTGIEVKCRRERIQGLNRFFARRLLA 81
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQ 114
+ + +V G RI EKR+ +
Sbjct: 82 EKIEEKVLG---------RISEKRQKIE 100
>gi|347538825|ref|YP_004846249.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
gi|345642002|dbj|BAK75835.1| peptide chain release factor 2 [Pseudogulbenkiania sp. NH8B]
Length = 355
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S V +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 202 RRHTSF-SSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPTGI 260
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR A ++L A+
Sbjct: 261 VVQCQNDRSQHRNRDEAMQMLRAK 284
>gi|169825227|ref|YP_001692838.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
gi|417924978|ref|ZP_12568405.1| peptide chain release factor 2 [Finegoldia magna
SY403409CC001050417]
gi|167832032|dbj|BAG08948.1| peptide chain release factor B [Finegoldia magna ATCC 29328]
gi|341592275|gb|EGS35161.1| peptide chain release factor 2 [Finegoldia magna
SY403409CC001050417]
Length = 324
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + ++ +ID+KD++ R SG GGQ V T++ V +THIPTG
Sbjct: 171 RRHTSFASVDVFPEIKDNHD--IQIDDKDLKIDTYRASGAGGQHVNMTDSAVRITHIPTG 228
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+ ++C RS NRK A ++L+A+
Sbjct: 229 VTVQCQTERSQIANRKYAMDMLIAK 253
>gi|119715986|ref|YP_922951.1| peptide chain release factor 1 [Nocardioides sp. JS614]
gi|166223579|sp|A1SHH9.1|RF1_NOCSJ RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119536647|gb|ABL81264.1| bacterial peptide chain release factor 1 (bRF-1) [Nocardioides sp.
JS614]
Length = 357
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 81
+IDE D++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 215 QIDENDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILR 274
Query: 82 -RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 111
R L AQ ++ +Q+R +D R
Sbjct: 275 SRLLAAAQEKADAEAGEARRSQVRTVDRSER 305
>gi|301064303|ref|ZP_07204737.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
gi|300441582|gb|EFK05913.1| peptide chain release factor 2 [delta proteobacterium NaphS2]
Length = 326
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS S+ + DLD + ++DE D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 173 RRHTSFASVSVLPEVDLDIN--IEVDENDLRIDTYRASGPGGQHVNKTSSAIRITHLPTK 230
Query: 64 IVIKCHQSRSLSENRKTARELL 85
IV++C +S N+ A ++L
Sbjct: 231 IVVQCQNEKSQHRNKDMAMKVL 252
>gi|443627028|ref|ZP_21111430.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
gi|443339445|gb|ELS53685.1| putative Peptide chain release factor 2 [Streptomyces
viridochromogenes Tue57]
Length = 368
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESDLRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|224824516|ref|ZP_03697623.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
gi|224603009|gb|EEG09185.1| peptide chain release factor 2 [Pseudogulbenkiania ferrooxidans
2002]
Length = 349
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S V +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 196 RRHTSF-SSVFVYPEVDDSFVIEINPADLRVDTYRASGAGGQHINKTDSAVRITHNPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR A ++L A+
Sbjct: 255 VVQCQNDRSQHRNRDEAMQMLRAK 278
>gi|408531516|emb|CCK29690.1| Peptide chain release factor 2 [Streptomyces davawensis JCM 4913]
Length = 352
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 20/98 (20%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L A
Sbjct: 217 IDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQA 276
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
++ E+RR ++++ K+DALK
Sbjct: 277 -----------------KLLERRR---QEEQAKMDALK 294
>gi|340793648|ref|YP_004759111.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
gi|340533558|gb|AEK36038.1| peptide chain release factor RF-2 [Corynebacterium variabile DSM
44702]
Length = 377
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAA 297
Query: 88 Q 88
+
Sbjct: 298 K 298
>gi|345854356|ref|ZP_08807192.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
gi|345634189|gb|EGX55860.1| peptide chain release factor 2 [Streptomyces zinciresistens K42]
Length = 368
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|163795148|ref|ZP_02189116.1| Protein chain release factor B [alpha proteobacterium BAL199]
gi|159179546|gb|EDP64075.1| Protein chain release factor B [alpha proteobacterium BAL199]
Length = 322
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+ +D S +++KD++ R SG GGQ V +T++ + +TH+P+GI
Sbjct: 156 RRHTSFSSAWVYPV-IDDSIDIVVEDKDLKVDTYRASGAGGQHVNRTDSAIRITHLPSGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS NR TA E+L A+ A+++R +E+ AT+ K
Sbjct: 215 VVQCQADRSQHRNRATAMEMLKARL---------YEAELKRREEEASATEATK 258
>gi|149927857|ref|ZP_01916108.1| peptide chain release factor 2 [Limnobacter sp. MED105]
gi|149823479|gb|EDM82710.1| peptide chain release factor 2 [Limnobacter sp. MED105]
Length = 304
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 152 RHTSFAS-LFVYPEVDDSFEIEINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 210
Query: 66 IKCHQSRSLSENRKTARELLVAQ 88
++C RS NR A +L A+
Sbjct: 211 VQCQNDRSQHRNRDEAWGMLKAK 233
>gi|121595079|ref|YP_986975.1| peptide chain release factor 2 [Acidovorax sp. JS42]
gi|222111422|ref|YP_002553686.1| hypothetical protein Dtpsy_2248 [Acidovorax ebreus TPSY]
gi|229576664|sp|A1W9H4.1|RF2_ACISJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790913|sp|B9MBK7.1|RF2_DIAST RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|120607159|gb|ABM42899.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax sp.
JS42]
gi|221730866|gb|ACM33686.1| conserved hypothetical protein [Acidovorax ebreus TPSY]
Length = 367
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-LFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|148266078|ref|YP_001232784.1| class I peptide chain release factor [Geobacter uraniireducens
Rf4]
gi|146399578|gb|ABQ28211.1| Class I peptide chain release factor [Geobacter uraniireducens
Rf4]
Length = 127
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA-RELL 85
+ E+DI E+F+R SG GGQ V KT+ CV L H PTGI +KC + RS S NR A RELL
Sbjct: 23 VREEDIDEQFIRSSGKGGQHVNKTSTCVYLKHKPTGIEVKCMRERSQSLNRFLARRELL 81
>gi|289207525|ref|YP_003459591.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
gi|288943156|gb|ADC70855.1| peptide chain release factor 1 [Thioalkalivibrio sp. K90mix]
Length = 361
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
+LD ++P I+ D++ R SG GGQ V KT++ V LTH+PTGIV++C + RS +NR
Sbjct: 210 ELDEVEMPDINPADLRVDTFRASGAGGQHVNKTDSAVRLTHLPTGIVVECQEERSQHKNR 269
Query: 79 KTARELLVA 87
A L A
Sbjct: 270 AKAMTYLAA 278
>gi|326316598|ref|YP_004234270.1| peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373434|gb|ADX45703.1| Peptide chain release factor 2 [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 367
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-LFVYPEIDDSIEININPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|420156842|ref|ZP_14663682.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
gi|394756852|gb|EJF39911.1| peptide chain release factor 2 [Clostridium sp. MSTE9]
Length = 375
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS L ++D +I DI+ + R SG GGQ V KT++ V LTH PTGI
Sbjct: 212 RRHTSFAS-LEVMPEIDSDTSVEISPDDIEMQVYRASGAGGQKVNKTSSAVRLTHKPTGI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L+++
Sbjct: 271 VVSCQVERSQYQNRDVAMKMLISK 294
>gi|328768224|gb|EGF78271.1| hypothetical protein BATDEDRAFT_90766 [Batrachochytrium
dendrobatidis JAM81]
Length = 177
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 58/90 (64%), Gaps = 2/90 (2%)
Query: 30 EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQW 89
E D+ E+F +GSGPGGQ + K + V L H PTG+ ++ + R L+ NR+ AR+LL+ +
Sbjct: 68 ETDLVEKFTKGSGPGGQKINKCKHSVQLWHTPTGLFVETQRFRELASNRREARKLLLLKL 127
Query: 90 DVQVNGEDSLNAQIRRIDEKRRATQEQKKR 119
D Q+NG+ S A ++D+ R +QK+R
Sbjct: 128 DQQINGDVSKLA--VKLDKHHRRVAKQKQR 155
>gi|162312297|ref|NP_596474.2| peptide release factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|212288570|sp|Q9Y811.2|YONI_SCHPO RecName: Full=Uncharacterized peptide chain release factor-like
protein C1105.18c, mitochondrial; Flags: Precursor
gi|157310457|emb|CAB50981.2| peptide release factor (predicted) [Schizosaccharomyces pombe]
Length = 162
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 24 KVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARE 83
++ ++ E+DI+E F+ G GPGGQ + KT+ + HIPTGI+++ +RS +NR AR+
Sbjct: 43 QLERLQEEDIEETFICGKGPGGQKINKTSIVAQVKHIPTGIIVRSQDTRSREQNRCIARK 102
Query: 84 LLVAQWDVQVNGEDSLNA-QIRRI 106
L + D +G DSL A +++RI
Sbjct: 103 RLTEKVDEFKHGNDSLLARKVQRI 126
>gi|159039554|ref|YP_001538807.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
gi|157918389|gb|ABV99816.1| peptide chain release factor 1 [Salinispora arenicola CNS-205]
Length = 362
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------A 81
ID +++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 217 IDPNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQALRILRA 276
Query: 82 RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 111
R L VAQ D+ AQ+R +D R
Sbjct: 277 RLLAVAQEQADAAASDARKAQVRTVDRSER 306
>gi|145596156|ref|YP_001160453.1| peptide chain release factor 1 [Salinispora tropica CNB-440]
gi|145305493|gb|ABP56075.1| bacterial peptide chain release factor 1 (bRF-1) [Salinispora
tropica CNB-440]
Length = 362
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 50/90 (55%), Gaps = 6/90 (6%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------A 81
ID +++ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +NR+ A
Sbjct: 217 IDPNELRIDVFRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNREQAMRILRA 276
Query: 82 RELLVAQWDVQVNGEDSLNAQIRRIDEKRR 111
R L VAQ D+ AQ+R +D R
Sbjct: 277 RLLAVAQEQADAAASDARKAQVRTVDRSER 306
>gi|294629650|ref|ZP_06708210.1| peptide chain release factor 2 [Streptomyces sp. e14]
gi|292832983|gb|EFF91332.1| peptide chain release factor 2 [Streptomyces sp. e14]
Length = 371
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|285018127|ref|YP_003375838.1| peptide chain release factor 2 [Xanthomonas albilineans GPE PC73]
gi|283473345|emb|CBA15850.1| probable peptide chain release factor 2 protein [Xanthomonas
albilineans GPE PC73]
Length = 373
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +TH+PTGI
Sbjct: 211 RRHTSF-TSVFVSPEVDDNIDIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 270 VVACQTGRSQHQNRDNAMKMLAAK 293
>gi|71908457|ref|YP_286044.1| peptide chain release factor 2 [Dechloromonas aromatica RCB]
gi|71848078|gb|AAZ47574.1| bacterial peptide chain release factor 2 (bRF-2) [Dechloromonas
aromatica RCB]
Length = 325
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGI
Sbjct: 172 RRHTSF-TSVFVFPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHVPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A ++L A
Sbjct: 231 VVQCQNDRSQHRNRDEAWQMLRA 253
>gi|120610527|ref|YP_970205.1| peptide chain release factor 2 [Acidovorax citrulli AAC00-1]
gi|120588991|gb|ABM32431.1| bacterial peptide chain release factor 2 (bRF-2) [Acidovorax
citrulli AAC00-1]
Length = 300
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-LFVYPEIDDSIEININPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 207 VQCQDGRSQHSNRDVA 222
>gi|455649556|gb|EMF28360.1| peptide chain release factor 2 [Streptomyces gancidicus BKS 13-15]
Length = 368
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|332525328|ref|ZP_08401493.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
gi|332108602|gb|EGJ09826.1| hypothetical protein RBXJA2T_05833 [Rubrivivax benzoatilyticus JA2]
Length = 248
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-LFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRDEAWAML 174
>gi|124267958|ref|YP_001021962.1| peptide chain release factor 2 [Methylibium petroleiphilum PM1]
gi|124260733|gb|ABM95727.1| bacterial peptide chain release factor 2 (bRF-2) [Methylibium
petroleiphilum PM1]
Length = 355
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 203 RHTSFAS-LFVYPEVDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 261
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 262 VQCQDGRSQHSNRDVA 277
>gi|30249212|ref|NP_841282.1| peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
gi|30180531|emb|CAD85140.1| Peptide chain release factor 2 [Nitrosomonas europaea ATCC 19718]
Length = 347
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 194 RRHTSFAS-VFVYPEVDDSIEIDINPADLRVDTFRASGAGGQHINKTDSAVRITHIPTGI 252
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS NR A +L ++ A++R+ +E ++A ++ K
Sbjct: 253 VVQCQSGRSQHRNRADAMTVLKSRL---------YEAELRKRNETKQAIEDSK 296
>gi|410694058|ref|YP_003624680.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
gi|294340483|emb|CAZ88864.1| Peptide chain release factor 2 (RF-2) [Thiomonas sp. 3As]
Length = 331
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 179 RHTSFAS-VFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 237
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS +NR A ++L
Sbjct: 238 VQCQNDRSQHKNRAEAWQML 257
>gi|227486641|ref|ZP_03916957.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
gi|227235353|gb|EEI85368.1| peptide chain release factor RF2 [Anaerococcus lactolyticus ATCC
51172]
Length = 329
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S +S +F + D D S +ID D++ R SG GGQ V KT++ V +THIPTG
Sbjct: 173 RRHTSFSSVDVFPELDEDTS--IEIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 230
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+V RS +NR+TA LL+++
Sbjct: 231 VVATSQAERSQMQNRETAMNLLISK 255
>gi|54296203|ref|YP_122572.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|397665850|ref|YP_006507387.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|53749988|emb|CAH11376.1| hypothetical protein lpp0229 [Legionella pneumophila str. Paris]
gi|395129261|emb|CCD07491.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS +NR AR+ L
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
+ + E + Q
Sbjct: 79 KLQAVFSDEKTKTQQ 93
>gi|52840422|ref|YP_094221.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378776125|ref|YP_005184555.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52627533|gb|AAU26274.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364506932|gb|AEW50456.1| peptide chain release factor [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 136
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS +NR AR+ L
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
+ + E + Q
Sbjct: 79 KLQAVFSDEKTKTQQ 93
>gi|397662732|ref|YP_006504270.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
gi|395126143|emb|CCD04323.1| Peptide chain release factor [Legionella pneumophila subsp.
pneumophila]
Length = 136
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS +NR AR+ L
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
+ + E + Q
Sbjct: 79 KLQAVFSDEKTKTQQ 93
>gi|344302814|gb|EGW33088.1| hypothetical protein SPAPADRAFT_60397 [Spathaspora passalidarum
NRRL Y-27907]
Length = 185
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 61/97 (62%), Gaps = 1/97 (1%)
Query: 9 SLASSLFRKYDLDYSKVPKIDEKDIQERFVRG-SGPGGQAVAKTNNCVVLTHIPTGIVIK 67
++ S++ +K + + + E +I+E F++G +G GGQ + KTN+ V LTH+PTGIV+
Sbjct: 35 AVVSTIPKKNKMPPRPLWLVKEDEIKEVFIKGGTGAGGQKINKTNSKVQLTHLPTGIVVT 94
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
C SRS +NRK ARELL + + N E NA ++
Sbjct: 95 CQYSRSQEQNRKRARELLALKLEELENPESCRNAVLK 131
>gi|383757704|ref|YP_005436689.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
gi|381378373|dbj|BAL95190.1| peptide chain release factor RF-2 PrfB [Rubrivivax gelatinosus
IL144]
Length = 351
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 199 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 257
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 258 VQCQNDRSQHRNRDEAWAML 277
>gi|114331309|ref|YP_747531.1| peptide chain release factor 2 [Nitrosomonas eutropha C91]
gi|114308323|gb|ABI59566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosomonas
eutropha C91]
Length = 348
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 195 RRHTSFAS-VFVYPEVDDSIEIDINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS NR A +L ++ A++R+ +E ++A ++ K
Sbjct: 254 VVQCQSGRSQHRNRADAMTVLKSRL---------YEAELRKRNETKQAIEDSK 297
>gi|256380143|ref|YP_003103803.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
gi|255924446|gb|ACU39957.1| peptide chain release factor 1 [Actinosynnema mirum DSM 43827]
Length = 354
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L D + + +ID+KD++ R SG GGQ+V T++ V +TH+PTGI
Sbjct: 193 RIHTSAAGVLVIPETEDVASI-EIDDKDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGI 251
Query: 65 VIKCHQSRSLSENRKTARELL------VAQWDVQVNGEDSLNAQIRRIDEKRR 111
V+ C RS +N+ A ++L +A+ Q D+ Q+R +D R
Sbjct: 252 VVSCQNERSQLQNKARAMQVLQARLQALAEEKAQQEASDARRTQVRTVDRSER 304
>gi|383807635|ref|ZP_09963195.1| chain release factor 2 [Candidatus Aquiluna sp. IMCC13023]
gi|383298989|gb|EIC91604.1| chain release factor 2 [Candidatus Aquiluna sp. IMCC13023]
Length = 367
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 56/105 (53%), Gaps = 16/105 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I + DI+ R SGPGGQ+V T++ V +TH PTGIV+ C +S +N+ +A +L
Sbjct: 230 EIPDSDIRIDVFRSSGPGGQSVNTTDSAVRITHTPTGIVVSCQNEKSQLQNKASAMRVL- 288
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
Q + +D +RRA E++K +K +W E+
Sbjct: 289 ---------------QSKLLDAQRRADNEKRKELAGDVKASWGEQ 318
>gi|395773704|ref|ZP_10454219.1| peptide chain release factor 2 [Streptomyces acidiscabies 84-104]
Length = 368
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|302560365|ref|ZP_07312707.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
gi|302477983|gb|EFL41076.1| peptide chain release factor 2 [Streptomyces griseoflavus Tu4000]
Length = 368
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|269128206|ref|YP_003301576.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
gi|268313164|gb|ACY99538.1| peptide chain release factor 2 [Thermomonospora curvata DSM 43183]
Length = 378
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
++DE D++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ TA +L
Sbjct: 232 EVDENDLRIDVYRSSGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQLQNKATAMAVLK 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|404257492|ref|ZP_10960817.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
gi|403403887|dbj|GAB99226.1| peptide chain release factor 2 [Gordonia namibiensis NBRC 108229]
Length = 373
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 88 Q 88
+
Sbjct: 297 K 297
>gi|264679119|ref|YP_003279026.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
gi|262209632|gb|ACY33730.1| peptide chain release factor 2 [Comamonas testosteroni CNB-2]
Length = 299
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 147 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 205
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 206 VQCQDGRSQHSNRDVA 221
>gi|444915267|ref|ZP_21235402.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
gi|444713682|gb|ELW54577.1| Peptide chain release factor 2 [Cystobacter fuscus DSM 2262]
Length = 319
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 9/91 (9%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I EKDI+ +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 179 IPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKILRG 238
Query: 88 QWDVQVNGEDSLNAQIRRIDEKRRATQEQKK 118
+ +++R + +R A + QKK
Sbjct: 239 RL---------YELEMKRREAERDAAEAQKK 260
>gi|332983173|ref|YP_004464614.1| peptide chain release factor 2 (bRF-2) [Mahella australiensis 50-1
BON]
gi|332700851|gb|AEE97792.1| bacterial peptide chain release factor 2 (bRF-2) [Mahella
australiensis 50-1 BON]
Length = 353
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD + +I+ +D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 194 RRHTSFASVDVMP-ELDDDEGVEINPEDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGI 252
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N++TA ++L A+
Sbjct: 253 VVQCQNERSQHSNKETAMKMLKAK 276
>gi|357632575|ref|ZP_09130453.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
gi|357581129|gb|EHJ46462.1| Peptide chain release factor 2 [Desulfovibrio sp. FW1012B]
Length = 366
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ LD + E+D++ R SGPGGQ V KT++ + +TH+PTG
Sbjct: 211 RRHTSFASVDVYPDAGLDIDI--DVKEEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTG 268
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ-WDVQV 93
IV++C +S NR++A ++L A+ +D+++
Sbjct: 269 IVVQCQNEKSQHRNRESAMKVLKARLYDLEL 299
>gi|221066286|ref|ZP_03542391.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
gi|220711309|gb|EED66677.1| peptide chain release factor 2 [Comamonas testosteroni KF-1]
Length = 299
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 147 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 205
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 206 VQCQDGRSQHSNRDVA 221
>gi|389736450|ref|ZP_10190000.1| peptide chain release factor 2 [Rhodanobacter sp. 115]
gi|388439329|gb|EIL95917.1| peptide chain release factor 2 [Rhodanobacter sp. 115]
Length = 257
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D S I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 95 RRHTSF-TSVFVSPEVDDSIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 153
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 154 VVACQTGRSQHQNRDTAMKMLAAK 177
>gi|239816762|ref|YP_002945672.1| hypothetical protein Vapar_3791 [Variovorax paradoxus S110]
gi|259585247|sp|C5CUX0.1|RF2_VARPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239803339|gb|ACS20406.1| conserved hypothetical protein [Variovorax paradoxus S110]
Length = 367
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-IFVYPEIDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|308481019|ref|XP_003102715.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
gi|308260801|gb|EFP04754.1| hypothetical protein CRE_29955 [Caenorhabditis remanei]
Length = 162
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 54/102 (52%), Gaps = 14/102 (13%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK--------- 67
K L K P++ ++D +++++ G GPGGQ V N V LTH+PTG V+K
Sbjct: 16 KQKLKGYKFPEVRKEDCEQKYISGWGPGGQKVNTAQNAVQLTHLPTGTVLKVLRFFFTIS 75
Query: 68 -----CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR 104
H+SR L +N + A E + D Q+NGE+ Q++
Sbjct: 76 FNFHQVHESRLLPKNIEIAFERMKFVLDRQINGENCYEEQLK 117
>gi|398810951|ref|ZP_10569759.1| peptide chain release factor 2 [Variovorax sp. CF313]
gi|398081762|gb|EJL72533.1| peptide chain release factor 2 [Variovorax sp. CF313]
Length = 300
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-IFVYPEIDDSIEIEINPSDVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 207 VQCQDGRSQHSNRDVA 222
>gi|148358384|ref|YP_001249591.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|296105734|ref|YP_003617434.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
gi|148280157|gb|ABQ54245.1| peptide chain release factor [Legionella pneumophila str. Corby]
gi|295647635|gb|ADG23482.1| peptide chain release factor [Legionella pneumophila 2300/99 Alcoy]
Length = 136
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ GSG GGQ + KT + V L H+PTG+ +KC +SRS +NR AR+ L
Sbjct: 19 IYETDLSEKFILGSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
+ + E + Q
Sbjct: 79 KLQAVFSDEKTKTQQ 93
>gi|319762196|ref|YP_004126133.1| peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|330825983|ref|YP_004389286.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
gi|317116757|gb|ADU99245.1| Peptide chain release factor 2 [Alicycliphilus denitrificans BC]
gi|329311355|gb|AEB85770.1| hypothetical protein Alide2_3440 [Alicycliphilus denitrificans
K601]
Length = 367
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-LFVYPEVDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|377821217|ref|YP_004977588.1| peptide chain release factor 2 [Burkholderia sp. YI23]
gi|357936052|gb|AET89611.1| peptide chain release factor 2 [Burkholderia sp. YI23]
Length = 406
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ DI+ R SG GGQ + KT++ V LTH PTGIV
Sbjct: 254 RHTSF-SSVFVYPEIDDSIEIEINPADIRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 312
Query: 66 IKCHQSRSLSENRKTARELLVAQ 88
++C RS NR A ++L A+
Sbjct: 313 VQCQNDRSQHRNRAEAMQMLKAR 335
>gi|237745578|ref|ZP_04576058.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
gi|229376929|gb|EEO27020.1| peptide chain release factor 2 [Oxalobacter formigenes HOxBLS]
Length = 349
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S S LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 197 RHTSFCS-LFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A E+L
Sbjct: 256 VQCQNDRSQHRNRADAWEML 275
>gi|293606108|ref|ZP_06688473.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
43553]
gi|292815563|gb|EFF74679.1| peptide chain release factor RF2 [Achromobacter piechaudii ATCC
43553]
Length = 300
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-VFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 207 VQCQNDRSQHRNRAEAMQML 226
>gi|311107121|ref|YP_003979974.1| peptide chain release factor [Achromobacter xylosoxidans A8]
gi|310761810|gb|ADP17259.1| peptide chain release factor 2 [Achromobacter xylosoxidans A8]
Length = 300
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-VFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 207 VQCQNDRSQHRNRAEAMQML 226
>gi|403252111|ref|ZP_10918424.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
gi|402914638|gb|EJX35648.1| protein chain release factor B [actinobacterium SCGC AAA027-L06]
Length = 368
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A ++ S +I+EKD++ R SGPGGQ V T++ V +TH+P+GI
Sbjct: 212 RRHTSFAGVEVVPV-VEQSDHIEIEEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPSGI 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR TA +L
Sbjct: 271 VVSCQNERSQIQNRATAMAVL 291
>gi|118581341|ref|YP_902591.1| class I peptide chain release factor [Pelobacter propionicus DSM
2379]
gi|118504051|gb|ABL00534.1| Class I peptide chain release factor [Pelobacter propionicus DSM
2379]
Length = 117
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 3/79 (3%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E+D++E+FVR SG GGQ V KT++ V L HIP+GI + + RS S NR AR L+
Sbjct: 23 VREEDLEEQFVRSSGSGGQHVNKTSSSVFLRHIPSGICVSASRERSQSVNRFLARRELLE 82
Query: 88 QWDVQVNGEDSLNAQIRRI 106
+ + Q E ++RRI
Sbjct: 83 RIEAQTGAE---TGEMRRI 98
>gi|409390739|ref|ZP_11242451.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
gi|403199116|dbj|GAB85685.1| peptide chain release factor 2 [Gordonia rubripertincta NBRC
101908]
Length = 373
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 88 Q 88
+
Sbjct: 297 K 297
>gi|367468573|ref|ZP_09468428.1| Peptide chain release factor 2 [Patulibacter sp. I11]
gi|365816357|gb|EHN11400.1| Peptide chain release factor 2 [Patulibacter sp. I11]
Length = 375
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I ++D++ R SG GGQ V KT++ V LTHIPTGIV+ C Q RS S N+ TA ++L
Sbjct: 231 EIKDEDLRVDTYRASGAGGQHVNKTDSAVRLTHIPTGIVVACQQERSQSANKMTAMKMLY 290
Query: 87 AQ 88
A+
Sbjct: 291 AK 292
>gi|365096484|ref|ZP_09331076.1| hypothetical protein KYG_20198 [Acidovorax sp. NO-1]
gi|363413864|gb|EHL21053.1| hypothetical protein KYG_20198 [Acidovorax sp. NO-1]
Length = 248
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-LFVYPEIDDSIEININPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 155 VQCQDGRSQHSNRDVA 170
>gi|376295313|ref|YP_005166543.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
gi|323457874|gb|EGB13739.1| Peptide chain release factor 2 [Desulfovibrio desulfuricans ND132]
Length = 372
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D+D + ++ ++D++ R SGPGGQ+V KT++ V +THIPTGI
Sbjct: 212 RRHTSFASVDVYP-DMDENIEIEVKDEDLRIDTFRSSGPGGQSVNKTSSAVRITHIPTGI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V +C +S N+ TA L+ A+ ++++I+E RR + K
Sbjct: 271 VAQCQNEKSQHRNKATALRLVKARL---------YERELKKIEESRRQDYQAK 314
>gi|94264473|ref|ZP_01288261.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
gi|93455104|gb|EAT05328.1| Peptide chain release factor 2 [delta proteobacterium MLMS-1]
Length = 303
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +L ++++KD++ R SG GGQ V KT++ + +TH+PTGI
Sbjct: 150 RRHTSFAS-VFIFPELTDDIAVEVNDKDLRIDTFRASGAGGQHVNKTSSAIRITHLPTGI 208
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V +C RS N+ TA ++L AQ
Sbjct: 209 VAQCQNERSQHRNKDTAMKMLKAQ 232
>gi|319795017|ref|YP_004156657.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
gi|315597480|gb|ADU38546.1| hypothetical protein Varpa_4378 [Variovorax paradoxus EPS]
Length = 367
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 215 RHTSFAS-IFVYPEIDDSIEIDINPSDVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|343924877|ref|ZP_08764414.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
gi|343765223|dbj|GAA11340.1| peptide chain release factor 2 [Gordonia alkanivorans NBRC 16433]
Length = 373
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 VDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 88 Q 88
+
Sbjct: 297 K 297
>gi|392574783|gb|EIW67918.1| hypothetical protein TREMEDRAFT_63806 [Tremella mesenterica DSM
1558]
Length = 394
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 45/83 (54%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A+ + D P +D KD++ +R G GGQ V KT + V LTH+PTGI
Sbjct: 222 RVHTSTAAVVILPIYPDLPDAPLVDPKDVKTEVMRSRGAGGQHVNKTESAVRLTHLPTGI 281
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ SRS +NR A E+L A
Sbjct: 282 TVSMQDSRSQHQNRAWAWEILRA 304
>gi|171058449|ref|YP_001790798.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
gi|170775894|gb|ACB34033.1| peptide chain release factor 2 [Leptothrix cholodnii SP-6]
Length = 300
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-LFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 207 VQCQDGRSQHSNRDVA 222
>gi|297183299|gb|ADI19436.1| protein chain release factor b [uncultured bacterium HF0500_16O16]
Length = 361
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 53/85 (62%), Gaps = 5/85 (5%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
RRH S AS +F D+D +P ++ ++D+Q + G GGQ V KT++ V +TH+PT
Sbjct: 205 RRHTSFAS-VFVYPDVD--SIPDVELRDEDLQIDTYKAGGAGGQHVNKTSSAVRITHLPT 261
Query: 63 GIVIKCHQSRSLSENRKTARELLVA 87
GIV+ C RS +N+ TA ++L A
Sbjct: 262 GIVVNCQNERSQLKNKGTAMKVLTA 286
>gi|269797862|ref|YP_003311762.1| peptide chain release factor 2 [Veillonella parvula DSM 2008]
gi|269094491|gb|ACZ24482.1| bacterial peptide chain release factor 2 (bRF- 2) [Veillonella
parvula DSM 2008]
Length = 368
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 210 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 269 VVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 308
>gi|345015595|ref|YP_004817949.1| peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
gi|344041944|gb|AEM87669.1| Peptide chain release factor 2 [Streptomyces violaceusniger Tu
4113]
Length = 370
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|429759674|ref|ZP_19292170.1| peptide chain release factor 2 [Veillonella atypica KON]
gi|429179264|gb|EKY20520.1| peptide chain release factor 2 [Veillonella atypica KON]
Length = 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 231 VVQCQSQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 270
>gi|72162878|ref|YP_290535.1| peptide chain release factor 2 [Thermobifida fusca YX]
gi|71916610|gb|AAZ56512.1| bacterial peptide chain release factor 2 (bRF-2) [Thermobifida
fusca YX]
Length = 375
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +NR TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMSILQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|303229877|ref|ZP_07316653.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|303232076|ref|ZP_07318779.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|401679864|ref|ZP_10811788.1| peptide chain release factor 2 [Veillonella sp. ACP1]
gi|302513182|gb|EFL55221.1| peptide chain release factor 2 [Veillonella atypica ACS-049-V-Sch6]
gi|302515433|gb|EFL57399.1| peptide chain release factor 2 [Veillonella atypica
ACS-134-V-Col7a]
gi|400218991|gb|EJO49862.1| peptide chain release factor 2 [Veillonella sp. ACP1]
Length = 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 231 VVQCQSQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 270
>gi|299529204|ref|ZP_07042649.1| peptide chain release factor 2 [Comamonas testosteroni S44]
gi|418531227|ref|ZP_13097144.1| peptide chain release factor 2 [Comamonas testosteroni ATCC 11996]
gi|298722827|gb|EFI63739.1| peptide chain release factor 2 [Comamonas testosteroni S44]
gi|371451729|gb|EHN64764.1| peptide chain release factor 2 [Comamonas testosteroni ATCC 11996]
Length = 248
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSF-SSLFVYPEIDDSIEININPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 155 VQCQDGRSQHSNRDVA 170
>gi|190891331|ref|YP_001977873.1| peptide chain release factor 2 [Rhizobium etli CIAT 652]
gi|190696610|gb|ACE90695.1| peptide chain release factor 2 (rf-2) protein [Rhizobium etli CIAT
652]
Length = 342
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A E+L A
Sbjct: 235 VVACQQERSQHKNRAKAWEMLRA 257
>gi|406912333|gb|EKD51968.1| hypothetical protein ACD_62C00149G0002 [uncultured bacterium]
Length = 312
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 5 RRHLSLASSLFRKYDLDYSKVP-----KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
RRH S S Y++V +I E+D++ +R SG GGQ V KT++ V LTH
Sbjct: 156 RRHTSFCSVFV------YAQVNDDIDIQIKEEDLEFEAIRASGAGGQKVNKTSSAVRLTH 209
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
PTGIV++C RS +NR TA +L
Sbjct: 210 KPTGIVVRCQTERSQHQNRATAMNML 235
>gi|254582148|ref|XP_002497059.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
gi|238939951|emb|CAR28126.1| ZYRO0D14476p [Zygosaccharomyces rouxii]
Length = 155
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
E +E+F+ G GPGGQ + K N+ V L H+PTGIV++C Q+RS +NRK ARE L
Sbjct: 31 ESQCEEKFLHGGRGPGGQKINKCNSKVQLKHLPTGIVVECQQTRSRDQNRKIAREKLA 88
>gi|366992948|ref|XP_003676239.1| hypothetical protein NCAS_0D02970 [Naumovozyma castellii CBS 4309]
gi|342302105|emb|CCC69878.1| hypothetical protein NCAS_0D02970 [Naumovozyma castellii CBS 4309]
Length = 156
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 11/134 (8%)
Query: 3 IFRRHLSLASSLFRKYDL--DYSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTH 59
+ RR LS + K ++ K E +I+E+F+ G G GGQ + K N+ V L H
Sbjct: 1 MMRRSLSTMPCVLIKRNMLPPRPKFQSFMEDEIEEKFLHGGRGAGGQKINKCNSKVQLKH 60
Query: 60 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLN--------AQIRRIDEKRR 111
+PTGI++ C ++RS +NRK AR+ L + +G S N A R +++R
Sbjct: 61 VPTGIIVSCQETRSRDQNRKLARDKLALALERHKSGGTSSNWVPTVREAALNERARQQKR 120
Query: 112 ATQEQKKRKLDALK 125
+ + + + K D++K
Sbjct: 121 SKERKSRAKYDSVK 134
>gi|242309101|ref|ZP_04808256.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
gi|239524525|gb|EEQ64391.1| peptide chain release factor 2 [Helicobacter pullorum MIT 98-5489]
Length = 364
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D + +I+EKD++ R SG GGQ + KT + + +THIPTGI
Sbjct: 209 KRHTSFASVQVTP-EIDDNIEIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 268 VVQCQNDRSQHKNKATALKML 288
>gi|282848898|ref|ZP_06258288.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
gi|282581403|gb|EFB86796.1| peptide chain release factor 2 [Veillonella parvula ATCC 17745]
Length = 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 231 VVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 270
>gi|365133245|ref|ZP_09342629.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
gi|363616055|gb|EHL67509.1| peptide chain release factor 2 [Subdoligranulum sp. 4_3_54A2FAA]
Length = 370
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS L +LD + +I +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 212 RRHTSFAS-LEVMPELDDAITVEIKPEDIKMEVFRSSGAGGQHINKTSSAVRLIHIPTGI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR ++L A+
Sbjct: 271 VVSCQNERSQFQNRDMCMKMLAAK 294
>gi|294791755|ref|ZP_06756903.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|294793616|ref|ZP_06758753.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|416999056|ref|ZP_11939725.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
gi|294455186|gb|EFG23558.1| peptide chain release factor 2 [Veillonella sp. 3_1_44]
gi|294456985|gb|EFG25347.1| peptide chain release factor 2 [Veillonella sp. 6_1_27]
gi|333977209|gb|EGL78068.1| peptide chain release factor 2 [Veillonella parvula
ACS-068-V-Sch12]
Length = 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 231 VVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 270
>gi|336118678|ref|YP_004573449.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
gi|334686461|dbj|BAK36046.1| peptide chain release factor 1 [Microlunatus phosphovorus NM-1]
Length = 360
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 1/85 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L +++ S+ +IDE D++ R SGPGGQ V T++ V +TH+P+GI
Sbjct: 197 RVHTSAAGVLVMP-EIEESEGVEIDENDLRIDVYRSSGPGGQGVNTTDSAVRITHLPSGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQW 89
V+ C RS +NR+ A +L A+
Sbjct: 256 VVSCQNERSQLQNREQAMRMLRARL 280
>gi|333915124|ref|YP_004488856.1| peptide chain release factor 2 [Delftia sp. Cs1-4]
gi|333745324|gb|AEF90501.1| Peptide chain release factor 2 [Delftia sp. Cs1-4]
Length = 367
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 215 RHTSFAS-LFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 274 VQCQDGRSQHSNRDVA 289
>gi|167772028|ref|ZP_02444081.1| hypothetical protein ANACOL_03402 [Anaerotruncus colihominis DSM
17241]
gi|167665826|gb|EDS09956.1| peptide chain release factor 2 [Anaerotruncus colihominis DSM
17241]
Length = 374
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS + + D+S +I+ +DI+ R SG GGQ + KT++ V LTHIPTG
Sbjct: 212 RRHTSFASVEVLPELPDDHS--VEINPEDIKMDVFRSSGAGGQHINKTSSAVRLTHIPTG 269
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV+ C RS +NR+ ++L A+
Sbjct: 270 IVVSCQNERSQFQNREMCMKMLTAK 294
>gi|424874825|ref|ZP_18298487.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
gi|393170526|gb|EJC70573.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
WSM1455]
Length = 376
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|241204131|ref|YP_002975227.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240858021|gb|ACS55688.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 376
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|300312096|ref|YP_003776188.1| peptide chain release factor 2 [Herbaspirillum seropedicae SmR1]
gi|300074881|gb|ADJ64280.1| peptide chain release factor 2 (RF-2) protein [Herbaspirillum
seropedicae SmR1]
Length = 337
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S +I+ D++ R SG GGQ + KT++ V LTH P+GIV
Sbjct: 185 RHTSF-SSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
++C RS NR A WD+ L A++ ++ ++R +++QK
Sbjct: 244 VQCQNDRSQHRNRAEA-------WDM-------LRAKLFELELRKRMSEQQK 281
>gi|170289255|ref|YP_001739493.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
gi|281412857|ref|YP_003346936.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
gi|170176758|gb|ACB09810.1| peptide chain release factor 1 [Thermotoga sp. RQ2]
gi|281373960|gb|ADA67522.1| peptide chain release factor 1 [Thermotoga naphthophila RKU-10]
Length = 342
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+EKDI+ R R SG GGQ V KT + V +THIPTGIV+ C RS +N
Sbjct: 183 LPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQN 242
Query: 78 RKTARELLVA 87
R+TA +L A
Sbjct: 243 RQTALRILRA 252
>gi|253827969|ref|ZP_04870854.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313142536|ref|ZP_07804729.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|253511375|gb|EES90034.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
gi|313131567|gb|EFR49184.1| peptide chain release factor 2 [Helicobacter canadensis MIT
98-5491]
Length = 363
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D + +I+EKD++ R SG GGQ + KT + + +THIPTGI
Sbjct: 209 KRHTSFASVQVTP-EIDDNISIEIEEKDLRIDTYRASGAGGQHINKTESAIRITHIPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 268 VVQCQNDRSQHKNKATALKML 288
>gi|424881103|ref|ZP_18304735.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392517466|gb|EIW42198.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 376
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|238494178|ref|XP_002378325.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
NRRL3357]
gi|317148917|ref|XP_003190253.1| peptidyl-tRNA hydrolase domain protein [Aspergillus oryzae RIB40]
gi|220694975|gb|EED51318.1| peptidyl-tRNA hydrolase domain protein [Aspergillus flavus
NRRL3357]
Length = 176
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
K+ + D+ +++G+GPGGQ + KTN+ V L H PTG+V+K +RS S+N K AR+LL
Sbjct: 40 KLHDADLTISYLKGTGPGGQKINKTNSAVQLIHKPTGLVVKSQATRSRSQNEKIARQLLA 99
Query: 87 AQWDVQVNGEDS 98
+ + G+ S
Sbjct: 100 DKVEQLEKGDQS 111
>gi|441513034|ref|ZP_20994866.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
gi|441452015|dbj|GAC52827.1| peptide chain release factor 2 [Gordonia amicalis NBRC 100051]
Length = 371
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|402838400|ref|ZP_10886907.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
gi|402272877|gb|EJU22088.1| peptide chain release factor 2 [Eubacteriaceae bacterium OBRC8]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 189 KRHTSFASVDVLP-ELDDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGV 247
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ TA ++L+A+
Sbjct: 248 VVQCQNERSQFSNKDTAMKMLMAK 271
>gi|238019424|ref|ZP_04599850.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
gi|237864123|gb|EEP65413.1| hypothetical protein VEIDISOL_01293 [Veillonella dispar ATCC 17748]
Length = 330
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 2/100 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHRPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNGEDSLNAQI 103
V++C RS +NR+ A LL A+ +++++ + L QI
Sbjct: 231 VVQCQTQRSQMQNREQALRLLRAKLFELELEKQAELKEQI 270
>gi|453383221|dbj|GAC82508.1| peptide chain release factor 2 [Gordonia paraffinivorans NBRC
108238]
Length = 373
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 237 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 296
Query: 88 Q 88
+
Sbjct: 297 K 297
>gi|409406593|ref|ZP_11255055.1| peptide chain release factor 2 [Herbaspirillum sp. GW103]
gi|386435142|gb|EIJ47967.1| peptide chain release factor 2 [Herbaspirillum sp. GW103]
Length = 349
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S +I+ D++ R SG GGQ + KT++ V LTH P+GIV
Sbjct: 197 RHTSF-SSLFVYPEVDESFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 255
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
++C RS NR A WD+ L A++ ++ ++R +++QK
Sbjct: 256 VQCQNDRSQHRNRAEA-------WDM-------LRAKLFELELRKRMSEQQK 293
>gi|363890707|ref|ZP_09318023.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
gi|361964449|gb|EHL17484.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM5]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 189 KRHTSFASVDVLP-ELDDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGV 247
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ TA ++L+A+
Sbjct: 248 VVQCQNERSQFSNKDTAMKMLMAK 271
>gi|363893323|ref|ZP_09320460.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
gi|361961421|gb|EHL14622.1| peptide chain release factor 2 [Eubacteriaceae bacterium CM2]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 189 KRHTSFASVDVLP-ELDDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGV 247
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ TA ++L+A+
Sbjct: 248 VVQCQNERSQFSNKDTAMKMLMAK 271
>gi|363894512|ref|ZP_09321593.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
gi|361962263|gb|EHL15409.1| peptide chain release factor 2 [Eubacteriaceae bacterium ACC19a]
Length = 344
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S I+ KD++ R SG GGQ V KT + + +THIPTG+
Sbjct: 189 KRHTSFASVDVLP-ELDDSIKIDINPKDLKIDTYRSSGAGGQHVNKTESAIRITHIPTGV 247
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ TA ++L+A+
Sbjct: 248 VVQCQNERSQFSNKDTAMKMLMAK 271
>gi|160898706|ref|YP_001564288.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
gi|160364290|gb|ABX35903.1| peptide chain release factor 2 [Delftia acidovorans SPH-1]
Length = 386
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S +I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 234 RHTSFAS-LFVYPEIDDSIQIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIV 292
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 293 VQCQDGRSQHSNRDVA 308
>gi|337278673|ref|YP_004618144.1| peptide chain release factor 2 [Ramlibacter tataouinensis TTB310]
gi|334729749|gb|AEG92125.1| candidate peptide chain release factor 2 [Ramlibacter tataouinensis
TTB310]
Length = 300
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 148 RHTSFAS-VFVYPEVDDSVEININPADVRVDTFRASGAGGQHINKTDSAVRLTHVPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C SRS NR A
Sbjct: 207 VQCQDSRSQHSNRDVA 222
>gi|334129644|ref|ZP_08503448.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
gi|333445329|gb|EGK73271.1| Peptide chain release factor 2 [Methyloversatilis universalis FAM5]
Length = 320
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S I+ D++ R SG GGQ + KT++ + +TH+PTGI
Sbjct: 167 RRHTSF-SSVFVYPEVDDSIEVDINPADLRVDTFRASGAGGQHINKTDSAIRITHVPTGI 225
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR A +L
Sbjct: 226 VVQCQNDRSQHKNRAEAMAML 246
>gi|297172547|gb|ADI23517.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0770_41L09]
Length = 331
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D ++ IDE D++ R SG GGQ V KT++ V +TH PTGI
Sbjct: 172 RRHTSFASVFIYPLVEDGIEI-DIDESDLRIDTYRASGAGGQHVNKTDSAVRITHEPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V C Q RS +N+ TA ++L A
Sbjct: 231 VATCQQERSQHKNKSTAMKMLRA 253
>gi|452851241|ref|YP_007492925.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
gi|451894895|emb|CCH47774.1| Peptide chain release factor 2 (fragment) [Desulfovibrio
piezophilus]
Length = 303
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 63/114 (55%), Gaps = 10/114 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D+D ++ ++D++ R SGPGGQ+V KT++ V +TH+PTGI
Sbjct: 144 RRHTSFASVDVYP-DMDDDIEIEVKDEDLRIDTFRSSGPGGQSVNKTSSAVRITHLPTGI 202
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK 118
V +C +S N+ TA L+ A+ ++++I++ RR E K+
Sbjct: 203 VAQCQNEKSQHRNKATALRLVKARL---------YELELKKIEDSRRQEYESKE 247
>gi|413958362|ref|ZP_11397601.1| peptide chain release factor 2 [Burkholderia sp. SJ98]
gi|413940942|gb|EKS72902.1| peptide chain release factor 2 [Burkholderia sp. SJ98]
Length = 248
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 49/82 (59%), Gaps = 1/82 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ DI+ R SG GGQ + KT++ V LTH PTGIV
Sbjct: 96 RHTSF-SSVFVYPEIDDSIEIEINPADIRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELLVA 87
++C RS NR A ++L A
Sbjct: 155 VQCQNDRSQHRNRAEAMQMLKA 176
>gi|374989282|ref|YP_004964777.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
gi|297159934|gb|ADI09646.1| peptide chain release factor 2 [Streptomyces bingchenggensis BCW-1]
Length = 383
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 245 EIDESELRIDVYRSSGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQ 304
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 305 A-----------------KLLERRR---QEEQAKMDALK 323
>gi|150388626|ref|YP_001318675.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
gi|149948488|gb|ABR47016.1| peptide chain release factor 2 [Alkaliphilus metalliredigens QYMF]
Length = 329
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S +I+ D++ R SG GGQ V KT++ V +THIPTG+
Sbjct: 171 KRHTSFASVDVMP-ELDDSIEVEINPNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGL 229
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR+T+ ++L A+
Sbjct: 230 VVQCQNQRSQHSNRETSMKMLKAK 253
>gi|441507575|ref|ZP_20989501.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
gi|441448651|dbj|GAC47462.1| peptide chain release factor 2 [Gordonia aichiensis NBRC 108223]
Length = 371
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|424864042|ref|ZP_18287949.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86B]
gi|400759902|gb|EJP74080.1| peptide chain release factor 2 [SAR86 cluster bacterium SAR86B]
Length = 365
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S I DI+ R SG GGQ V KT++ V LTHIPTG+
Sbjct: 212 RRHTSFAS-VFISPEIDDSIEINISNADIRTDTYRASGAGGQHVNKTDSAVRLTHIPTGV 270
Query: 65 VIKCHQSRSLSENRKTA 81
V +C RS +N++ A
Sbjct: 271 VAQCQSDRSQHKNKEIA 287
>gi|389843547|ref|YP_006345627.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
gi|387858293|gb|AFK06384.1| peptide chain release factor 2 [Mesotoga prima MesG1.Ag.4.2]
Length = 370
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 7/87 (8%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKID--EKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S AS S+F + D +VP+I+ +D++ R G GGQ V KT++ V +TH+P
Sbjct: 209 RRHTSFASVSVFPEMD----EVPEIEIRPEDLKIDTYRSGGAGGQHVNKTDSAVRITHLP 264
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV+ C RS +N+ A ++L A+
Sbjct: 265 TGIVVACQTERSQHQNKANAMKMLYAK 291
>gi|45201377|ref|NP_986947.1| AGR281Cp [Ashbya gossypii ATCC 10895]
gi|44986311|gb|AAS54771.1| AGR281Cp [Ashbya gossypii ATCC 10895]
gi|374110197|gb|AEY99102.1| FAGR281Cp [Ashbya gossypii FDAG1]
Length = 176
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 41/59 (69%), Gaps = 1/59 (1%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
E I+E+F+ G GPGGQ + K N+ V L H+P+GIVI+C +RS +NRK ARE L A
Sbjct: 50 EASIEEKFLHGGRGPGGQKINKCNSKVQLRHVPSGIVIECQATRSREQNRKLAREKLAA 108
>gi|377563641|ref|ZP_09792980.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
gi|377529088|dbj|GAB38145.1| peptide chain release factor 2 [Gordonia sputi NBRC 100414]
Length = 371
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|421586991|ref|ZP_16032456.1| peptide chain release factor 2 [Rhizobium sp. Pop5]
gi|403708662|gb|EJZ23281.1| peptide chain release factor 2 [Rhizobium sp. Pop5]
Length = 322
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A E+L A
Sbjct: 215 VVACQQERSQHKNRAKAWEMLRA 237
>gi|417105946|ref|ZP_11962003.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
gi|327190272|gb|EGE57372.1| peptide chain release factor 2 [Rhizobium etli CNPAF512]
Length = 342
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|254479978|ref|ZP_05093226.1| peptide chain release factor 2 [marine gamma proteobacterium
HTCC2148]
gi|214039540|gb|EEB80199.1| peptide chain release factor 2 [marine gamma proteobacterium
HTCC2148]
Length = 310
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D + +I+ D++ R SG GGQ V KT++ V LTH PTGI
Sbjct: 157 RRHTSF-SSVFVSPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHNPTGI 215
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
++C RS +NR A +LL A+
Sbjct: 216 AVQCQTERSQHQNRDNAMKLLRAK 239
>gi|116251510|ref|YP_767348.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
3841]
gi|115256158|emb|CAK07239.1| putative peptide chain release factor 2 (rf-2) [Rhizobium
leguminosarum bv. viciae 3841]
Length = 342
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|377562090|ref|ZP_09791505.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
gi|377520760|dbj|GAB36670.1| peptide chain release factor 2 [Gordonia otitidis NBRC 100426]
Length = 371
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|328543671|ref|YP_004303780.1| peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
gi|326413415|gb|ADZ70478.1| Peptide chain release factor 2 [Polymorphum gilvum SL003B-26A1]
Length = 323
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSFASAWVYPV-VDDSIEIDINESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR TA +L A
Sbjct: 215 VVQCQSERSQHKNRATAWAMLKA 237
>gi|323143931|ref|ZP_08078589.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
gi|322416295|gb|EFY06971.1| peptide chain release factor 1 [Succinatimonas hippei YIT 12066]
Length = 364
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ ++ SK P+++ D++ R SG GGQ + KT++ + +THIPTGI
Sbjct: 197 RVHTS-ACTVMVLPEIPPSKAPEVNPADLRIDTFRASGAGGQHINKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR+ A E+L++
Sbjct: 256 VVECQDERSQHRNRERAMEVLLS 278
>gi|395008186|ref|ZP_10391871.1| peptide chain release factor 2 [Acidovorax sp. CF316]
gi|394313821|gb|EJE50786.1| peptide chain release factor 2 [Acidovorax sp. CF316]
Length = 299
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 147 RHTSFAS-LFVYPEIDDSIQIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 205
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 206 VQCQDGRSQHGNRDIA 221
>gi|295836903|ref|ZP_06823836.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
gi|295826265|gb|EFG64762.1| peptide chain release factor 2 [Streptomyces sp. SPB74]
Length = 371
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|296136248|ref|YP_003643490.1| hypothetical protein Tint_1790 [Thiomonas intermedia K12]
gi|295796370|gb|ADG31160.1| conserved hypothetical protein [Thiomonas intermedia K12]
Length = 367
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 215 RHTSFAS-VFVYPEVDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS +NR A ++L
Sbjct: 274 VQCQNDRSQHKNRAEAWQML 293
>gi|398803760|ref|ZP_10562778.1| peptide chain release factor 2 [Polaromonas sp. CF318]
gi|398096013|gb|EJL86344.1| peptide chain release factor 2 [Polaromonas sp. CF318]
Length = 355
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 203 RHTSFAS-VFVYPEIDDSIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 261
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 262 VQCQDGRSQHSNRDVA 277
>gi|422320027|ref|ZP_16401095.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
gi|317405230|gb|EFV85568.1| peptide chain release factor 2 [Achromobacter xylosoxidans C54]
Length = 386
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 234 RHTSFAS-VFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 292
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 293 VQCQNDRSQHRNRAEAMQML 312
>gi|402496775|ref|YP_006556035.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
gi|398650048|emb|CCF78218.1| protein chain release factor B [Wolbachia endosymbiont of
Onchocerca ochengi]
Length = 284
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPTG+
Sbjct: 130 KRHTSFASVGVTPVIEDSIDIA-VDEKDLRIDTYRASGAGGQHVNKTESAVRITHIPTGV 188
Query: 65 VIKCHQSRSLSENRKTARELL 85
+I+C SRS +N+ A +LL
Sbjct: 189 IIQCQNSRSQHQNKNEALKLL 209
>gi|340788303|ref|YP_004753768.1| peptide chain release factor 2 [Collimonas fungivorans Ter331]
gi|340553570|gb|AEK62945.1| peptide chain release factor RF-2 [Collimonas fungivorans Ter331]
Length = 299
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S ++ D++ R SG GGQ + KT++ V LTH+P+GIV
Sbjct: 147 RHTSF-SSLFVYPEVDDSIDIDVNPADVRVDTYRASGAGGQHINKTDSAVRLTHMPSGIV 205
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
++C RS NR A WD+ L A++ ++ ++R +++QK
Sbjct: 206 VQCQNDRSQHRNRAEA-------WDM-------LKAKLYELELRKRMSEQQK 243
>gi|424794119|ref|ZP_18220136.1| peptide chain release factor 2 [Xanthomonas translucens pv.
graminis ART-Xtg29]
gi|422796165|gb|EKU24724.1| peptide chain release factor 2 [Xanthomonas translucens pv.
graminis ART-Xtg29]
Length = 338
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 176 RRHTSF-TSVFVSPEVDDNIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 235 VVACQTGRSQHQNRDNAMKMLAAK 258
>gi|405381835|ref|ZP_11035658.1| peptide chain release factor 2 [Rhizobium sp. CF142]
gi|397321722|gb|EJJ26137.1| peptide chain release factor 2 [Rhizobium sp. CF142]
Length = 342
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|160931692|ref|ZP_02079086.1| hypothetical protein CLOLEP_00523 [Clostridium leptum DSM 753]
gi|156869337|gb|EDO62709.1| peptide chain release factor 2 [Clostridium leptum DSM 753]
Length = 374
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 51/92 (55%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS +P+I+E +DI+ R SG GGQ V KT++ V
Sbjct: 212 RRHTSFAS---------LEVMPEINEDVEVEIAPEDIKMDVYRASGAGGQKVNKTSSAVR 262
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
LTHIPTGIV+ C RS +NR+ A ++L ++
Sbjct: 263 LTHIPTGIVVSCQVERSQHQNREVAMKMLASK 294
>gi|116493078|ref|YP_804813.1| peptide chain release factor 1 [Pediococcus pentosaceus ATCC 25745]
gi|421894487|ref|ZP_16324975.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
gi|116103228|gb|ABJ68371.1| bacterial peptide chain release factor 1 (bRF-1) [Pediococcus
pentosaceus ATCC 25745]
gi|385272577|emb|CCG90347.1| peptide chain release factor 1 [Pediococcus pentosaceus IE-3]
Length = 359
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 50/78 (64%), Gaps = 2/78 (2%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR+ A +L
Sbjct: 216 EIDQKDIRTDVYRSSGAGGQHINKTSSAVRMTHLPTGIVVAMQDERSQQQNREKAMRILK 275
Query: 87 AQ-WD-VQVNGEDSLNAQ 102
A+ +D Q ED+ NA+
Sbjct: 276 ARVYDYYQTQEEDAYNAE 293
>gi|313893701|ref|ZP_07827268.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
gi|313441715|gb|EFR60140.1| peptide chain release factor 2 [Veillonella sp. oral taxon 158 str.
F0412]
Length = 330
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + ID KD+Q R SG GGQ + KT++ V +TH PTGI
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVEINIDMKDVQVDTYRASGAGGQHINKTDSAVRMTHKPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +NR+ A LL A+
Sbjct: 231 VVQCQTQRSQMQNREQALRLLRAK 254
>gi|407974333|ref|ZP_11155242.1| peptide chain release factor 2 [Nitratireductor indicus C115]
gi|407430022|gb|EKF42697.1| peptide chain release factor 2 [Nitratireductor indicus C115]
Length = 322
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ +D + I E +++ R SG GGQ V T++ V +THIP+GI
Sbjct: 156 RRHTSFASAWVYPV-VDDTIAIDIPESEVRIDTYRASGAGGQHVNTTDSAVRITHIPSGI 214
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C + RS +NR TA E+L
Sbjct: 215 VVQCQKERSQHKNRATAWEML 235
>gi|258651861|ref|YP_003201017.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
gi|258555086|gb|ACV78028.1| peptide chain release factor 2 [Nakamurella multipartita DSM 44233]
Length = 369
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 39/58 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
+DEKD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L
Sbjct: 230 VDEKDLRVDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMAVL 287
>gi|222053782|ref|YP_002536144.1| class I peptide chain release factor [Geobacter daltonii FRC-32]
gi|221563071|gb|ACM19043.1| Class I peptide chain release factor [Geobacter daltonii FRC-32]
Length = 139
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ E+D+ E+F+R SG GGQ V KT+ CV L H PTGI +KC RS S NR AR L+
Sbjct: 23 VREEDLDEQFIRSSGKGGQHVNKTSTCVYLRHRPTGIEVKCMAERSQSLNRFLARRQLL 81
>gi|402078884|gb|EJT74149.1| peptidyl-tRNA hydrolase domain-containing protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 167
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 50 KTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA 101
KTN+ V L HIPTG+V+KC +RS +NRK AR+LL A+ DV NGE S A
Sbjct: 40 KTNSAVQLKHIPTGLVVKCQATRSRDQNRKIARDLLAAKLDVMFNGEQSRQA 91
>gi|256390407|ref|YP_003111971.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
gi|256356633|gb|ACU70130.1| peptide chain release factor 1 [Catenulispora acidiphila DSM 44928]
Length = 356
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT------ 80
+I+ D++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+++
Sbjct: 214 EINANDLRIDVFRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNKESAMRILR 273
Query: 81 ARELLVAQWDVQVNGEDSLNAQIRRIDEKRR 111
AR L VAQ + D+ +QIR +D R
Sbjct: 274 ARLLAVAQEEADREASDTRKSQIRTMDRSER 304
>gi|350545576|ref|ZP_08915048.1| Peptide chain release factor 2, programmed frameshift-containing
[Candidatus Burkholderia kirkii UZHbot1]
gi|350526633|emb|CCD39931.1| Peptide chain release factor 2, programmed frameshift-containing
[Candidatus Burkholderia kirkii UZHbot1]
Length = 300
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ DI+ R SG GGQ + KT++ V LTH PTGIV
Sbjct: 148 RHTSF-SSVFVYPEIDDSIEIEINPVDIRTDTYRASGAGGQHINKTDSAVRLTHAPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELLVAQ 88
++C RS NR A ++L A+
Sbjct: 207 VQCQNDRSQHRNRAEAMQMLKAR 229
>gi|218660225|ref|ZP_03516155.1| peptide chain release factor 2 [Rhizobium etli IE4771]
Length = 350
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|415912112|ref|ZP_11553493.1| Peptide chain release factor 2 [Herbaspirillum frisingense GSF30]
gi|407762148|gb|EKF71054.1| Peptide chain release factor 2 [Herbaspirillum frisingense GSF30]
Length = 337
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 62/112 (55%), Gaps = 15/112 (13%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S +I+ D++ R SG GGQ + KT++ V LTH P+GIV
Sbjct: 185 RHTSF-SSLFVYPEVDDSFEIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
++C RS NR A WD+ L A++ ++ ++R +++QK
Sbjct: 244 VQCQNDRSQHRNRAEA-------WDM-------LRAKLFELELRKRMSEQQK 281
>gi|365990351|ref|XP_003672005.1| hypothetical protein NDAI_0I01930 [Naumovozyma dairenensis CBS
421]
gi|343770779|emb|CCD26762.1| hypothetical protein NDAI_0I01930 [Naumovozyma dairenensis CBS
421]
Length = 185
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 51/83 (61%), Gaps = 2/83 (2%)
Query: 10 LASSLFRKYDLDY-SKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIK 67
L +L +K L K ++ EK+ +E+F+ G GPGGQ + K N+ V L H+PTG+ I
Sbjct: 14 LPYTLIKKTKLPPRPKFTELMEKECEEKFMHGGRGPGGQKINKCNSKVQLRHMPTGLSIS 73
Query: 68 CHQSRSLSENRKTARELLVAQWD 90
C ++RS +NRK ARE + + +
Sbjct: 74 CQETRSREQNRKIAREKMALELE 96
>gi|423018559|ref|ZP_17009280.1| peptide chain release factor 2 [Achromobacter xylosoxidans AXX-A]
gi|338778321|gb|EGP42796.1| peptide chain release factor 2 [Achromobacter xylosoxidans AXX-A]
Length = 248
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-VFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 155 VQCQNDRSQHRNRAEAMQML 174
>gi|338535949|ref|YP_004669283.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
gi|337262045|gb|AEI68205.1| peptide chain release factor 2 [Myxococcus fulvus HW-1]
Length = 302
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 39/58 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I EKDI+ +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 161 IPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 218
>gi|297562654|ref|YP_003681628.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847102|gb|ADH69122.1| peptide chain release factor 2 [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 372
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+ D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDDGDLRVDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQLQNKATAMSMLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|241765770|ref|ZP_04763713.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
gi|241364339|gb|EER59478.1| peptide chain release factor 2 [Acidovorax delafieldii 2AN]
Length = 300
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 148 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 207 VQCQDGRSQHGNRDIA 222
>gi|171463253|ref|YP_001797366.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171192791|gb|ACB43752.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 349
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS ++ ++D S +++ DI+ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 197 RHTSFAS-IYVYPEIDDSIEIEVNPADIRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 256 VQCQNDRSQHRNRAEAMTML 275
>gi|297194069|ref|ZP_06911467.1| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
gi|297152097|gb|EDY64812.2| peptide chain release factor 2 [Streptomyces pristinaespiralis ATCC
25486]
Length = 340
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTHIPTGIV+ C RS +N+ +A +L
Sbjct: 204 EIDESELRVDVYRASGPGGQGVNTTDSAVRLTHIPTGIVVSCQNERSQIQNKASAMNVLQ 263
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR QE++ R +DALK
Sbjct: 264 A-----------------KLLERRR--QEEQAR-MDALK 282
>gi|295689553|ref|YP_003593246.1| hypothetical protein Cseg_2164 [Caulobacter segnis ATCC 21756]
gi|295431456|gb|ADG10628.1| conserved hypothetical protein [Caulobacter segnis ATCC 21756]
Length = 373
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS+ D ++ +I+ D++ R SG GGQ + KT++ V LTHIP
Sbjct: 207 SSARRHTSFASAWVYPVVDDTIEI-EINPADVRTDTYRASGAGGQHINKTDSAVRLTHIP 265
Query: 62 TGIVIKCHQSRSLSENRKTARELLVA 87
TGI + C RS +NR+ A ++L A
Sbjct: 266 TGIAVACQAGRSQHQNREEAWKMLRA 291
>gi|440226311|ref|YP_007333402.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
gi|440037822|gb|AGB70856.1| peptide chain release factor 2 [Rhizobium tropici CIAT 899]
Length = 342
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|398834200|ref|ZP_10592061.1| peptide chain release factor 2 [Herbaspirillum sp. YR522]
gi|398220562|gb|EJN07008.1| peptide chain release factor 2 [Herbaspirillum sp. YR522]
Length = 337
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S +I+ D++ R SG GGQ + KT++ V LTH P+GIV
Sbjct: 185 RHTSF-SSLFVYPEVDESFDIEINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPSGIV 243
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A E+L
Sbjct: 244 VQCQNDRSQHRNRAEAWEML 263
>gi|68535523|ref|YP_250228.1| peptide chain release factor 2 [Corynebacterium jeikeium K411]
gi|260579727|ref|ZP_05847586.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
gi|68263122|emb|CAI36610.1| peptide chain release factor RF-2 [Corynebacterium jeikeium K411]
gi|258602157|gb|EEW15475.1| peptide chain release factor 2 [Corynebacterium jeikeium ATCC
43734]
Length = 377
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 238 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQA 297
Query: 88 Q 88
+
Sbjct: 298 K 298
>gi|344207289|ref|YP_004792430.1| peptide chain release factor 2 [Stenotrophomonas maltophilia JV3]
gi|343778651|gb|AEM51204.1| peptide chain release factor 2 [Stenotrophomonas maltophilia JV3]
Length = 374
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 212 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 271 VVACQTGRSQHQNRDNAMKMLAAK 294
>gi|424894608|ref|ZP_18318182.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393178835|gb|EJC78874.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 376
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|386718400|ref|YP_006184726.1| peptide chain release factor 2 programmed frameshift-containing,
partial [Stenotrophomonas maltophilia D457]
gi|424668609|ref|ZP_18105634.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
Ab55555]
gi|384077962|emb|CCH12551.1| Peptide chain release factor 2 programmed frameshift-containing
[Stenotrophomonas maltophilia D457]
gi|401068871|gb|EJP77395.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
Ab55555]
gi|456735757|gb|EMF60483.1| Peptide chain release factor 2, programmed frameshift-containing
[Stenotrophomonas maltophilia EPM1]
Length = 308
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 204
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 205 VVACQTGRSQHQNRDNAMKMLAAK 228
>gi|367002890|ref|XP_003686179.1| hypothetical protein TPHA_0F02650 [Tetrapisispora phaffii CBS
4417]
gi|357524479|emb|CCE63745.1| hypothetical protein TPHA_0F02650 [Tetrapisispora phaffii CBS
4417]
Length = 168
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 9 SLASSLFRKYDLD-YSKVPKIDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVI 66
S + L +K+ L SK E + E F+ G GPGGQ + K N+ V L H+PTG+V+
Sbjct: 15 SFSVLLIKKHKLPPRSKFTISMENECVEAFMHGGRGPGGQKINKCNSKVQLKHLPTGVVV 74
Query: 67 KCHQSRSLSENRKTARELLVAQWD 90
C ++RS +NRK ARE L + D
Sbjct: 75 SCQETRSREQNRKIAREKLALELD 98
>gi|218461792|ref|ZP_03501883.1| peptide chain release factor 2 [Rhizobium etli Kim 5]
Length = 320
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 215 VVQCQQERSQHKNRAKAWDMLRA 237
>gi|194365600|ref|YP_002028210.1| peptide chain release factor 2 [Stenotrophomonas maltophilia
R551-3]
gi|238693429|sp|B4SHV0.1|RF2_STRM5 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|194348404|gb|ACF51527.1| conserved hypothetical protein [Stenotrophomonas maltophilia
R551-3]
Length = 374
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 212 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 271 VVACQTGRSQHQNRDNAMKMLAAK 294
>gi|121603978|ref|YP_981307.1| peptide chain release factor 2 [Polaromonas naphthalenivorans CJ2]
gi|120592947|gb|ABM36386.1| bacterial peptide chain release factor 2 (bRF-2) [Polaromonas
naphthalenivorans CJ2]
Length = 347
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 195 RHTSFAS-VFVYPEIDDSIEIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHIPTGIV 253
Query: 66 IKCHQSRSLSENRKTA 81
++C + RS NR A
Sbjct: 254 VQCQEGRSQHGNRDVA 269
>gi|86357282|ref|YP_469174.1| peptide chain release factor 2 [Rhizobium etli CFN 42]
gi|86281384|gb|ABC90447.1| peptide chain release factor 2 protein [Rhizobium etli CFN 42]
Length = 322
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWVYPVVDDSINIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A E+L A
Sbjct: 215 VVACQQERSQHKNRAKAWEMLRA 237
>gi|254521932|ref|ZP_05133987.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
gi|219719523|gb|EED38048.1| peptide chain release factor 2 [Stenotrophomonas sp. SKA14]
Length = 308
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 204
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 205 VVACQTGRSQHQNRDNAMKMLAAK 228
>gi|408822688|ref|ZP_11207578.1| peptide chain release factor 2 [Pseudomonas geniculata N1]
Length = 308
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 146 RRHTSF-TSVFVSPEIDDNIDITINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 204
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 205 VVACQTGRSQHQNRDNAMKMLAAK 228
>gi|347820566|ref|ZP_08874000.1| peptide chain release factor 2 [Verminephrobacter aporrectodeae
subsp. tuberculatae At4]
Length = 248
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/80 (45%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A + L
Sbjct: 155 VQCQDGRSQHGNRDIAWQRL 174
>gi|291453772|ref|ZP_06593162.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|359149446|ref|ZP_09182456.1| peptide chain release factor 2 [Streptomyces sp. S4]
gi|421740172|ref|ZP_16178444.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
gi|291356721|gb|EFE83623.1| peptide chain release factor 2 [Streptomyces albus J1074]
gi|406691412|gb|EKC95161.1| bacterial peptide chain release factor 2 (bRF-2) [Streptomyces sp.
SM8]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|213964464|ref|ZP_03392664.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
gi|213952657|gb|EEB64039.1| peptide chain release factor 1 [Corynebacterium amycolatum SK46]
Length = 357
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 52/91 (57%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKD++ R SG GGQ V T++ V LTH+PTG+V+ C + RS +N+ A ++L
Sbjct: 217 QIDEKDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQKERSQIQNKARAMQVLA 276
Query: 87 AQW------DVQVNGEDSLNAQIRRIDEKRR 111
A+ ++ D +Q+R +D R
Sbjct: 277 ARLQQMKEEEIAEAASDQRKSQVRNMDRSER 307
>gi|302524557|ref|ZP_07276899.1| peptide chain release factor 2 [Streptomyces sp. AA4]
gi|302433452|gb|EFL05268.1| peptide chain release factor 2 [Streptomyces sp. AA4]
Length = 376
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ +P EKDI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+
Sbjct: 237 DHVDIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKAA 293
Query: 81 ARELLVA 87
A ++L A
Sbjct: 294 AMKVLQA 300
>gi|374308692|ref|YP_005055123.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
gi|291167022|gb|EFE29068.1| peptide chain release factor 2 [Filifactor alocis ATCC 35896]
Length = 338
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S +S+ ++D + ID D++ R SG GGQ V KT++ V +THIPTGI
Sbjct: 181 KRHTSF-TSVDVIPEMDDTVEVDIDTNDLKIDTYRASGAGGQHVNKTDSAVRITHIPTGI 239
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
VI C RS NR+TA ++L ++
Sbjct: 240 VITCQNERSQHSNRETAMKMLFSK 263
>gi|262203335|ref|YP_003274543.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
gi|262086682|gb|ACY22650.1| peptide chain release factor 2 [Gordonia bronchialis DSM 43247]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENDVKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|294142153|ref|YP_003558131.1| peptide chain release factor 1 [Shewanella violacea DSS12]
gi|293328622|dbj|BAJ03353.1| peptide chain release factor 1 [Shewanella violacea DSS12]
Length = 361
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI+ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A +
Sbjct: 218 KINPADLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
L+A+I+ + DEKRR+ +E +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSAEETTRRNL 299
>gi|257054828|ref|YP_003132660.1| peptide chain release factor 2 [Saccharomonospora viridis DSM
43017]
gi|256584700|gb|ACU95833.1| bacterial peptide chain release factor 2 (bRF-2) [Saccharomonospora
viridis DSM 43017]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 48/70 (68%), Gaps = 3/70 (4%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
++D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+
Sbjct: 226 EIDHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNK 282
Query: 79 KTARELLVAQ 88
+A ++L A+
Sbjct: 283 ASAMKVLQAK 292
>gi|333989938|ref|YP_004522552.1| peptide chain release factor 1 [Mycobacterium sp. JDM601]
gi|333485906|gb|AEF35298.1| peptide chain release factor 1 PrfA [Mycobacterium sp. JDM601]
Length = 358
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + ++V IDE D++ R SG GGQ V T++ V LTH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVAEV-AIDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELL------VAQWDVQVNGEDSLNAQIRRIDEKRR 111
V+ C RS +N+ A ++L +A+ Q + +QIR +D R
Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQALAEEQAQADASADRASQIRTVDRSER 307
>gi|297621679|ref|YP_003709816.1| peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376980|gb|ADI38810.1| putative peptide chain release factor 1 [Waddlia chondrophila WSU
86-1044]
gi|337292999|emb|CCB90997.1| putative peptide chain release factor 1 [Waddlia chondrophila
2032/99]
Length = 139
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I +D+ E+F+ GSG GGQ V KT +CV L H P+GI IKC RS NR AR LL
Sbjct: 20 IRNEDLTEKFILGSGKGGQKVNKTASCVYLKHEPSGIEIKCQLERSRELNRFYARRLLCE 79
Query: 88 QWDVQV 93
+ + ++
Sbjct: 80 KIEEKI 85
>gi|404497824|ref|YP_006721930.1| peptidyl-tRNA hydrolase-like protein [Geobacter metallireducens
GS-15]
gi|418067860|ref|ZP_12705190.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
gi|78195424|gb|ABB33191.1| peptidyl-tRNA hydrolase-related protein [Geobacter
metallireducens GS-15]
gi|373558039|gb|EHP84404.1| Class I peptide chain release factor [Geobacter metallireducens
RCH3]
Length = 121
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA-RELLV 86
+ E D++E FVR SG GGQ V KT CV + H PTGI +KC + RS S NR A RE+LV
Sbjct: 25 VAEADLEESFVRSSGAGGQHVNKTATCVQIKHRPTGIEVKCMKDRSQSVNRFLARREILV 84
>gi|300781422|ref|ZP_07091276.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
33030]
gi|300533129|gb|EFK54190.1| peptide chain release factor RF1 [Corynebacterium genitalium ATCC
33030]
Length = 360
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 42/63 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEKD++ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L A
Sbjct: 220 IDEKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLQA 279
Query: 88 QWD 90
+ D
Sbjct: 280 RLD 282
>gi|448823366|ref|YP_007416531.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7111]
gi|448276863|gb|AGE36287.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7111]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 230 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLA 289
Query: 87 A 87
A
Sbjct: 290 A 290
>gi|429194272|ref|ZP_19186373.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
gi|428670028|gb|EKX68950.1| peptide chain release factor 2 [Streptomyces ipomoeae 91-03]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|373457567|ref|ZP_09549334.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
gi|371719231|gb|EHO41002.1| Peptide chain release factor 2 [Caldithrix abyssi DSM 13497]
Length = 367
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ + +TH+PTGI
Sbjct: 210 RRHTSFAS-VFVIPEIDENIDVEINPSDLRIDTYRASGAGGQHVNKTDSAIRITHLPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +N+ A ++L A
Sbjct: 269 VVQCQNERSQHKNKANALKILAA 291
>gi|88706910|ref|ZP_01104609.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
gi|88698832|gb|EAQ95952.1| peptide chain release factor 2 [Congregibacter litoralis KT71]
Length = 299
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ V LTH P+GI
Sbjct: 146 RRHTSFAS-VFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHNPSGI 204
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR A +LL
Sbjct: 205 VVQCQTERSQHQNRDNAMKLL 225
>gi|453077037|ref|ZP_21979799.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
gi|452760158|gb|EME18500.1| peptide chain release factor 2 [Rhodococcus triatomae BKS 15-14]
Length = 367
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|389796765|ref|ZP_10199816.1| peptide chain release factor 2 [Rhodanobacter sp. 116-2]
gi|388448290|gb|EIM04275.1| peptide chain release factor 2 [Rhodanobacter sp. 116-2]
Length = 329
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D +I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDDIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 226 VVACQTGRSQHQNRDTAMKMLAAK 249
>gi|325292702|ref|YP_004278566.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
gi|325060555|gb|ADY64246.1| peptide chain release factor 2 [Agrobacterium sp. H13-3]
Length = 342
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ ED+ NAQ
Sbjct: 235 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREDAANAQ 274
>gi|386840528|ref|YP_006245586.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374100829|gb|AEY89713.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451793821|gb|AGF63870.1| peptide chain release factor 2 [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKATAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|389783420|ref|ZP_10194792.1| peptide chain release factor 2 [Rhodanobacter spathiphylli B39]
gi|388434683|gb|EIL91617.1| peptide chain release factor 2 [Rhodanobacter spathiphylli B39]
Length = 364
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 202 RRHTSF-TSVFVSPEVDDDIEIDINPADLKTDVYRSSGAGGQHVNKTESAVRITHIPTNT 260
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 261 VVACQTGRSQHQNRDTAMKMLAAK 284
>gi|373488399|ref|ZP_09579064.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
gi|372006724|gb|EHP07356.1| bacterial peptide chain release factor 2 (bRF-2) [Holophaga foetida
DSM 6591]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++ +LD + I +KD++ R SG GGQ V +T + V TH+PTGI
Sbjct: 209 RRHTSFAA-VYVSPELDDTINVDIPDKDLRIDVFRASGAGGQHVNRTESAVRFTHLPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR TA ++L
Sbjct: 268 VVSCQNERSQIKNRATALKVL 288
>gi|260223373|emb|CBA33874.1| Peptide chain release factor 2 [Curvibacter putative symbiont of
Hydra magnipapillata]
Length = 342
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 190 RHTSFAS-VFVYPEIDDSIEIDINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 248
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 249 VQCQDGRSQHSNRDVA 264
>gi|357399593|ref|YP_004911518.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386355632|ref|YP_006053878.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337766002|emb|CCB74713.1| Peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|365806140|gb|AEW94356.1| peptide chain release factor 2 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 368
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +NR +A +L
Sbjct: 232 EIDESELRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNRASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|357590811|ref|ZP_09129477.1| peptide chain release factor 2 [Corynebacterium nuruki S6-4]
Length = 374
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQIQNKASAMRVLAA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|442322136|ref|YP_007362157.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
gi|441489778|gb|AGC46473.1| peptide chain release factor 2 [Myxococcus stipitatus DSM 14675]
Length = 373
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I EKDI +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 232 IPEKDIDLKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 289
>gi|352081995|ref|ZP_08952818.1| peptide chain release factor 2 [Rhodanobacter sp. 2APBS1]
gi|351682133|gb|EHA65239.1| peptide chain release factor 2 [Rhodanobacter sp. 2APBS1]
Length = 367
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D +I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 205 RRHTSF-TSVFVSPEVDDDIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 263
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 264 VVACQTGRSQHQNRDTAMKMLAAK 287
>gi|421484279|ref|ZP_15931850.1| peptide chain release factor 2 [Achromobacter piechaudii HLE]
gi|400197488|gb|EJO30453.1| peptide chain release factor 2 [Achromobacter piechaudii HLE]
Length = 248
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S ++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-VFVYPEVDDSFEVDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 155 VQCQNDRSQHRNRAEAMQML 174
>gi|426375274|ref|XP_004054469.1| PREDICTED: peptide chain release factor 1, mitochondrial [Gorilla
gorilla gorilla]
Length = 445
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
K+D KD++ R GPGGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|407783481|ref|ZP_11130681.1| protein chain release factor B [Oceanibaculum indicum P24]
gi|407201606|gb|EKE71604.1| protein chain release factor B [Oceanibaculum indicum P24]
Length = 287
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S D +V + EKD++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 124 RRHTSFSSVWVYPVVDDEIEV-EYQEKDLRIDTYRASGAGGQHVNKTDSAIRITHIPTGI 182
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR TA +L A
Sbjct: 183 VVQCQSDRSQHKNRATAFSMLKA 205
>gi|359796142|ref|ZP_09298747.1| peptide chain release factor 2 [Achromobacter arsenitoxydans SY8]
gi|359365828|gb|EHK67520.1| peptide chain release factor 2 [Achromobacter arsenitoxydans SY8]
Length = 248
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S ++ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-VFVYPEVDDSFEVDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 155 VQCQNDRSQHRNRAEAMQML 174
>gi|418406857|ref|ZP_12980176.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
gi|358007350|gb|EHJ99673.1| peptide chain release factor 2 [Agrobacterium tumefaciens 5A]
Length = 322
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ ED+ NAQ
Sbjct: 215 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREDAANAQ 254
>gi|172040385|ref|YP_001800099.1| peptide chain release factor 1 [Corynebacterium urealyticum DSM
7109]
gi|171851689|emb|CAQ04665.1| peptide chain release factor RF-1 [Corynebacterium urealyticum DSM
7109]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 230 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGVVVTCQKERSQIQNRARAMQVLA 289
Query: 87 A 87
A
Sbjct: 290 A 290
>gi|108759158|ref|YP_632896.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
gi|108463038|gb|ABF88223.1| peptide chain release factor 2 [Myxococcus xanthus DK 1622]
Length = 373
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I EKDI +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 232 IPEKDIDLKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 289
>gi|433676518|ref|ZP_20508618.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
gi|430818380|emb|CCP38921.1| peptide chain release factor 2 [Xanthomonas translucens pv.
translucens DSM 18974]
Length = 364
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +THIPT I
Sbjct: 202 RRHTSF-TSVFVSPEVDDNIDIEINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNI 260
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 261 VVACQTGRSQHQNRDNAMKMLAAK 284
>gi|315499977|ref|YP_004088780.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
gi|315417989|gb|ADU14629.1| peptide chain release factor 2 [Asticcacaulis excentricus CB 48]
Length = 373
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D + V I+ D++ R SG GGQ V KT++ V LTHIPTGI
Sbjct: 210 RRHTSFASVWVYPV-VDDTIVIDINPADVRTDTYRASGAGGQHVNKTDSAVRLTHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ C RS NR A ++L A
Sbjct: 269 AVACQAGRSQHANRDEAWKMLRA 291
>gi|16126117|ref|NP_420681.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|221234887|ref|YP_002517323.1| peptide chain release factor 2 [Caulobacter crescentus NA1000]
gi|24638156|sp|Q9A752.1|RF2_CAUCR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|254790910|sp|B8GWM3.1|RF2_CAUCN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|13423319|gb|AAK23849.1| peptide chain release factor 2 [Caulobacter crescentus CB15]
gi|220964059|gb|ACL95415.1| bacterial peptide chain Release factor 2 (RF-2) [Caulobacter
crescentus NA1000]
Length = 371
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS+ D ++ +I+ D++ R SG GGQ + KT++ V LTHIP
Sbjct: 204 SSARRHTSFASAWVYPVVDDNIEI-EINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIP 262
Query: 62 TGIVIKCHQSRSLSENRKTARELLVA 87
TGI + C RS +NR+ A ++L A
Sbjct: 263 TGIAVACQAGRSQHQNREEAWKMLRA 288
>gi|407277743|ref|ZP_11106213.1| peptide chain release factor 2 [Rhodococcus sp. P14]
Length = 374
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 VDENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|229551967|ref|ZP_04440692.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
gi|229314702|gb|EEN80675.1| peptide chain release factor RF1 [Lactobacillus rhamnosus LMS2-1]
Length = 386
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 221 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 276
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 277 IPTGIVVSMQDERSQQENRARAMQIL 302
>gi|254513973|ref|ZP_05126034.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
gi|219676216|gb|EED32581.1| peptide chain release factor 2 [gamma proteobacterium NOR5-3]
Length = 280
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + +I+ D++ R SG GGQ V KT++ V LTH P+GI
Sbjct: 127 RRHTSFAS-VFVAPEIDDNIEIEINPADLRVDTYRASGAGGQHVNKTDSAVRLTHNPSGI 185
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR A +LL
Sbjct: 186 VVQCQTERSQHQNRDNAMKLL 206
>gi|315924849|ref|ZP_07921066.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
gi|315621748|gb|EFV01712.1| peptide chain release factor RF2 [Pseudoramibacter alactolyticus
ATCC 23263]
Length = 369
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS L ++D S +I+ DI+ R SG GGQ V KT++ + +TH+PTG+
Sbjct: 209 RRHTSFAS-LDVTPEVDDSVEIEINPDDIRVDTYRSSGAGGQHVNKTSSAIRITHLPTGV 267
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR+ A +L
Sbjct: 268 VVQCQNERSQHQNREVAMNML 288
>gi|199597587|ref|ZP_03211016.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|258508166|ref|YP_003170917.1| peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|258539381|ref|YP_003173880.1| peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|385827838|ref|YP_005865610.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|385835027|ref|YP_005872801.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
gi|199591610|gb|EDY99687.1| Protein chain release factor A [Lactobacillus rhamnosus HN001]
gi|257148093|emb|CAR87066.1| Peptide chain release factor 1 [Lactobacillus rhamnosus GG]
gi|257151057|emb|CAR90029.1| Peptide chain release factor 1 [Lactobacillus rhamnosus Lc 705]
gi|259649483|dbj|BAI41645.1| peptide chain release factor [Lactobacillus rhamnosus GG]
gi|355394518|gb|AER63948.1| peptide chain release factor 1 [Lactobacillus rhamnosus ATCC 8530]
Length = 359
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 250 IPTGIVVSMQDERSQQENRARAMQIL 275
>gi|359420531|ref|ZP_09212466.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
gi|358243528|dbj|GAB10535.1| peptide chain release factor 2 [Gordonia araii NBRC 100433]
Length = 374
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENDLKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|423080184|ref|ZP_17068815.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
gi|357543845|gb|EHJ25858.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
ATCC 21052]
Length = 381
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 216 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 271
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 272 IPTGIVVSMQDERSQQENRARAMQIL 297
>gi|383454655|ref|YP_005368644.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
gi|380733978|gb|AFE09980.1| peptide chain release factor 2 [Corallococcus coralloides DSM 2259]
Length = 319
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
+ EKDI+ +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 178 LPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 235
>gi|359684765|ref|ZP_09254766.1| peptide chain release factor 2 [Leptospira santarosai str.
2000030832]
Length = 335
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|418070392|ref|ZP_12707667.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
gi|357539812|gb|EHJ23829.1| peptide chain release factor 1 [Lactobacillus rhamnosus R0011]
Length = 359
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 250 IPTGIVVSMQDERSQQENRARAMQIL 275
>gi|297693942|ref|XP_002824259.1| PREDICTED: peptide chain release factor 1, mitochondrial isoform 2
[Pongo abelii]
Length = 445
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 59/105 (56%), Gaps = 14/105 (13%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
K+D KD++ R GPGGQ V KT++ V L HIPTG+V++C Q RS +N++ A +L
Sbjct: 294 KLDPKDLRIDTFRAKGPGGQHVNKTDSAVRLVHIPTGLVVECQQERSQIKNKEIAFRVLR 353
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
A+ Q+ I++ +R Q+Q RKL +A ER
Sbjct: 354 ARLYQQI------------IEKDKR--QQQSARKLQVGTRAQSER 384
>gi|113971503|ref|YP_735296.1| peptide chain release factor 1 [Shewanella sp. MR-4]
gi|114046304|ref|YP_736854.1| peptide chain release factor 1 [Shewanella sp. MR-7]
gi|119361605|sp|Q0HFC8.1|RF1_SHESM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|119361606|sp|Q0HYK8.1|RF1_SHESR RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|113886187|gb|ABI40239.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-4]
gi|113887746|gb|ABI41797.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
MR-7]
Length = 363
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|421769637|ref|ZP_16206343.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|421771458|ref|ZP_16208118.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
gi|411184142|gb|EKS51276.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP2]
gi|411186044|gb|EKS53170.1| Peptide chain release factor 1 [Lactobacillus rhamnosus LRHMDP3]
Length = 386
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 221 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 276
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 277 IPTGIVVSMQDERSQQENRARAMQIL 302
>gi|403508387|ref|YP_006640025.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
gi|402801847|gb|AFR09257.1| peptide chain release factor 2 [Nocardiopsis alba ATCC BAA-2165]
Length = 370
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ TA +L
Sbjct: 232 EIDETELRVDVYRSSGPGGQGVNTTDSAVRITHMPTGIVVSCQNERSQLQNKATAMSMLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|302534760|ref|ZP_07287102.1| peptide chain release factor 2 [Streptomyces sp. C]
gi|302443655|gb|EFL15471.1| peptide chain release factor 2 [Streptomyces sp. C]
Length = 369
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|220933707|ref|YP_002512606.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
gi|254790905|sp|B8GLA1.1|RF1_THISH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|219995017|gb|ACL71619.1| peptide chain release factor 1 [Thioalkalivibrio sulfidophilus
HL-EbGr7]
Length = 361
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 43/69 (62%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D + P+I+ D++ R SG GGQ V KT++ + LTH+PTGIV++C RS +NR
Sbjct: 212 DEVEAPEINPADLRVDTYRASGAGGQHVNKTDSAIRLTHLPTGIVVECQDERSQHKNRAR 271
Query: 81 ARELLVAQW 89
A LL A+
Sbjct: 272 AMSLLAAKL 280
>gi|163750755|ref|ZP_02157990.1| peptide chain release factor 1 [Shewanella benthica KT99]
gi|161329450|gb|EDQ00444.1| peptide chain release factor 1 [Shewanella benthica KT99]
Length = 361
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI+ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A +L
Sbjct: 218 KINPADLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAMSVLT 277
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSVEETTRRNL 299
>gi|29831645|ref|NP_826279.1| peptide chain release factor 2 [Streptomyces avermitilis MA-4680]
gi|81717933|sp|Q82D82.1|RF2_STRAW RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|29608761|dbj|BAC72814.1| putative peptide chain release factor 2 [Streptomyces avermitilis
MA-4680]
Length = 368
Score = 63.5 bits (153), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVL- 290
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
Q + +D +R ++++ K+DALK
Sbjct: 291 ---------------QAKLLDRRR----QEEQAKMDALK 310
>gi|32266159|ref|NP_860191.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
gi|81666133|sp|Q7VIE6.1|RF2_HELHP RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|32262209|gb|AAP77257.1| peptide chain release factor 2 [Helicobacter hepaticus ATCC 51449]
Length = 366
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD +I++KDI+ R SG GGQ V KT + + +TH PTGI
Sbjct: 211 KRHTSFASVQVSP-ELDDDINIEIEDKDIRIDTYRASGAGGQHVNKTESAIRITHFPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 270 VVQCQNDRSQHKNKATAMKML 290
>gi|117919221|ref|YP_868413.1| peptide chain release factor 1 [Shewanella sp. ANA-3]
gi|166223605|sp|A0KT88.1|RF1_SHESA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117611553|gb|ABK47007.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
ANA-3]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|24375323|ref|NP_719366.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
gi|32171552|sp|Q8EAR3.1|RF1_SHEON RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|24350136|gb|AAN56810.1| peptide chain release factor 1 PrfA [Shewanella oneidensis MR-1]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|395762773|ref|ZP_10443442.1| peptide chain release factor 2 [Janthinobacterium lividum PAMC
25724]
Length = 248
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S +SLF ++D S ++ DI+ R SG GGQ + KT++ V +TH PTGIV
Sbjct: 96 RHTSF-TSLFVYPEVDDSIEIDVNPADIRVDTYRASGAGGQHINKTDSAVRMTHAPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELLVAQ 88
++C RS NR A E+L A+
Sbjct: 155 VQCQNDRSQHRNRAEAMEMLKAK 177
>gi|336310167|ref|ZP_08565139.1| peptide chain release factor 1 [Shewanella sp. HN-41]
gi|335865897|gb|EGM70888.1| peptide chain release factor 1 [Shewanella sp. HN-41]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|325981471|ref|YP_004293873.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
gi|325530990|gb|ADZ25711.1| hypothetical protein NAL212_0774 [Nitrosomonas sp. AL212]
Length = 368
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S +I+ D++ R SG GGQ + KT++ + +TH PTGI
Sbjct: 214 RRHTSF-SSVFVYPEVDDSIEIEINPADLRIDTFRASGAGGQHINKTDSAIRITHNPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A +L ++ A++R+ +E+++A +E K
Sbjct: 273 VVQCQSGRSQHRNKADALTMLKSRL---------FEAELRKRNEEKQAIEENK 316
>gi|421100863|ref|ZP_15561482.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
gi|410796048|gb|EKR98188.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200901122]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|433609099|ref|YP_007041468.1| Peptide chain release factor 1 [Saccharothrix espanaensis DSM
44229]
gi|407886952|emb|CCH34595.1| Peptide chain release factor 1 [Saccharothrix espanaensis DSM
44229]
Length = 455
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 85
+IDE D++ R SG GGQ+V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 315 EIDENDLRVDVFRSSGKGGQSVNTTDSAVRITHLPTGIVVSCQNERSQLQNKARAMQVLQ 374
Query: 86 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 111
+A+ Q D+ QIR +D R
Sbjct: 375 SRLQVLAEEKAQQEASDARRTQIRTVDRSER 405
>gi|91775149|ref|YP_544905.1| peptide chain release factor 2 [Methylobacillus flagellatus KT]
gi|91709136|gb|ABE49064.1| bacterial peptide chain release factor 2 (bRF-2) [Methylobacillus
flagellatus KT]
Length = 354
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S V +I+ D++ R SG GGQ + KT++ V +TH+PT
Sbjct: 201 RRHTSFAS-VFVYPEVDDSIVVEINPADLRIDTYRASGAGGQHINKTDSAVRITHLPTNT 259
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N+ A +L AQ
Sbjct: 260 VVQCQNDRSQHRNKDEAMNMLKAQ 283
>gi|417778830|ref|ZP_12426630.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
gi|410781090|gb|EKR65669.1| peptide chain release factor 2 [Leptospira weilii str. 2006001853]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|418720338|ref|ZP_13279536.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|418735369|ref|ZP_13291780.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|421094064|ref|ZP_15554785.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410363205|gb|EKP14237.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200801926]
gi|410743316|gb|EKQ92059.1| peptide chain release factor 2 [Leptospira borgpetersenii str. UI
09149]
gi|410748990|gb|EKR01883.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Castellonis str. 200801910]
gi|456890986|gb|EMG01739.1| peptide chain release factor 2 [Leptospira borgpetersenii str.
200701203]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|116329128|ref|YP_798848.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116330263|ref|YP_799981.1| peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
gi|122281974|sp|Q04V47.1|RF2_LEPBJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|122283090|sp|Q04YD0.1|RF2_LEPBL RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|116121872|gb|ABJ79915.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. L550]
gi|116123952|gb|ABJ75223.1| Peptide chain release factor 2 [Leptospira borgpetersenii serovar
Hardjo-bovis str. JB197]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|342215025|ref|ZP_08707694.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
gi|341590131|gb|EGS33380.1| peptide chain release factor 2 [Veillonella sp. oral taxon 780 str.
F0422]
Length = 330
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S + ++D + +D KD+Q R SG GGQ + KT++ V +THIP
Sbjct: 169 SAARRHTSFCAVDVMP-EIDETVEINLDMKDVQVDTYRASGAGGQHINKTDSAVRMTHIP 227
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV++C RS +NR+ +LL A+
Sbjct: 228 TGIVVQCQSERSQIQNREQCLKLLRAK 254
>gi|302037377|ref|YP_003797699.1| peptide chain release factor 2 [Candidatus Nitrospira defluvii]
gi|300605441|emb|CBK41774.1| Peptide chain release factor 2 (RF-2) [Candidatus Nitrospira
defluvii]
Length = 377
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +L+ ID+KD++ R G GGQ V K + +THIPTGI
Sbjct: 207 RRHTSFAS-VFVYPELEDDVQVVIDDKDLRVDTFRAGGAGGQNVNKVETAIRITHIPTGI 265
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR A ++L A
Sbjct: 266 VVQCQNERSQLQNRNGAMKILKA 288
>gi|418754703|ref|ZP_13310925.1| peptide chain release factor 2 [Leptospira santarosai str. MOR084]
gi|421112342|ref|ZP_15572800.1| peptide chain release factor 2 [Leptospira santarosai str. JET]
gi|422005320|ref|ZP_16352509.1| peptide chain release factor 2 [Leptospira santarosai serovar
Shermani str. LT 821]
gi|409964804|gb|EKO32679.1| peptide chain release factor 2 [Leptospira santarosai str. MOR084]
gi|410802397|gb|EKS08557.1| peptide chain release factor 2 [Leptospira santarosai str. JET]
gi|417255985|gb|EKT85431.1| peptide chain release factor 2 [Leptospira santarosai serovar
Shermani str. LT 821]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|399037698|ref|ZP_10734373.1| peptide chain release factor 2 [Rhizobium sp. CF122]
gi|398064720|gb|EJL56396.1| peptide chain release factor 2 [Rhizobium sp. CF122]
Length = 342
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A ++L A
Sbjct: 235 VVACQQERSQHKNRAKAWDMLRA 257
>gi|41408560|ref|NP_961396.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|254774338|ref|ZP_05215854.1| peptide chain release factor 1 [Mycobacterium avium subsp. avium
ATCC 25291]
gi|417747546|ref|ZP_12396012.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|440776169|ref|ZP_20955020.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S5]
gi|61214644|sp|Q73X48.1|RF1_MYCPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|41396918|gb|AAS04779.1| PrfA [Mycobacterium avium subsp. paratuberculosis K-10]
gi|336460910|gb|EGO39793.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S397]
gi|436723884|gb|ELP47660.1| peptide chain release factor 1 [Mycobacterium avium subsp.
paratuberculosis S5]
Length = 357
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + ++V +IDE D++ R SG GGQ V T++ V +TH+PTG+
Sbjct: 196 RVHTSAAGVLVYPEPEEVAEV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGV 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDV----QVNGEDSLN--AQIRRIDEKRR 111
V+ C RS +N+ A ++L A+ Q + E S + +QIR +D R
Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSER 307
>gi|405374674|ref|ZP_11029053.1| Peptide chain release factor 2 protein [Chondromyces apiculatus DSM
436]
gi|397086839|gb|EJJ17928.1| Peptide chain release factor 2 protein [Myxococcus sp. (contaminant
ex DSM 436)]
Length = 359
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 39/58 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
+ EKDI+ +F+RG G GGQ V KT++ L H+PTGI+I C RS S N+ A ++L
Sbjct: 218 LPEKDIELKFIRGGGAGGQKVNKTSSTAQLRHLPTGIIITCQTERSQSANKDMAFKIL 275
>gi|418746900|ref|ZP_13303213.1| peptide chain release factor 2 [Leptospira santarosai str. CBC379]
gi|410792132|gb|EKR90074.1| peptide chain release factor 2 [Leptospira santarosai str. CBC379]
gi|456873403|gb|EMF88778.1| peptide chain release factor 2 [Leptospira santarosai str. ST188]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|410450201|ref|ZP_11304243.1| peptide chain release factor 2 [Leptospira sp. Fiocruz LV3954]
gi|410015960|gb|EKO78050.1| peptide chain release factor 2 [Leptospira sp. Fiocruz LV3954]
Length = 367
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+GI
Sbjct: 214 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|118464752|ref|YP_880755.1| peptide chain release factor 1 [Mycobacterium avium 104]
gi|166223570|sp|A0QCW7.1|RF1_MYCA1 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|118166039|gb|ABK66936.1| peptide chain release factor 1 [Mycobacterium avium 104]
Length = 357
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + ++V +IDE D++ R SG GGQ V T++ V +TH+PTG+
Sbjct: 196 RVHTSAAGVLVYPEPEEVAEV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGV 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDV----QVNGEDSLN--AQIRRIDEKRR 111
V+ C RS +N+ A ++L A+ Q + E S + +QIR +D R
Sbjct: 255 VVTCQNERSQLQNKARALQVLAARLQAMAEEQASAEASADRASQIRTVDRSER 307
>gi|120600166|ref|YP_964740.1| peptide chain release factor 1 [Shewanella sp. W3-18-1]
gi|146291906|ref|YP_001182330.1| peptide chain release factor 1 [Shewanella putrefaciens CN-32]
gi|386312572|ref|YP_006008737.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
gi|166223604|sp|A4Y3J8.1|RF1_SHEPC RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223606|sp|A1RNE1.1|RF1_SHESW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|120560259|gb|ABM26186.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella sp.
W3-18-1]
gi|145563596|gb|ABP74531.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
putrefaciens CN-32]
gi|319425197|gb|ADV53271.1| peptide chain release factor 1 [Shewanella putrefaciens 200]
Length = 363
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVMHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|441516620|ref|ZP_20998368.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
gi|441456673|dbj|GAC56329.1| peptide chain release factor 2 [Gordonia hirsuta DSM 44140 = NBRC
16056]
Length = 372
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENEVKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLAA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|409436778|ref|ZP_11263948.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
gi|408751702|emb|CCM75102.1| Peptide chain release factor 2 (RF-2) [Rhizobium mesoamericanum
STM3625]
Length = 342
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A ++L A
Sbjct: 235 VVACQQERSQHKNRAKAWDMLRA 257
>gi|399545708|ref|YP_006559016.1| peptide chain release factor 2 [Marinobacter sp. BSs20148]
gi|399161040|gb|AFP31603.1| Peptide chain release factor 2 [Marinobacter sp. BSs20148]
Length = 351
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S V +I+ D++ R SG GGQ V +T + V LTH PTGI
Sbjct: 198 RRHTSF-SSVFVAPEVDDSIVIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGI 256
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ A + L A+
Sbjct: 257 VVACQAGRSQHQNKDQAMKQLKAK 280
>gi|310829208|ref|YP_003961565.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
gi|308740942|gb|ADO38602.1| peptide chain release factor 2 [Eubacterium limosum KIST612]
Length = 310
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS L ++D S +I+ DI+ R SG GGQ V KT++ + +THIPTG+
Sbjct: 153 RRHTSFAS-LDVTPEVDDSVEIEINPDDIRVDTYRASGAGGQHVNKTSSAIRITHIPTGV 211
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N++ A +L
Sbjct: 212 VVQCQNERSQHQNKEVAMNML 232
>gi|294812911|ref|ZP_06771554.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|326441313|ref|ZP_08216047.1| peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
gi|294325510|gb|EFG07153.1| Peptide chain release factor 2 [Streptomyces clavuligerus ATCC
27064]
Length = 368
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDETELRVDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|269219853|ref|ZP_06163707.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
F0332]
gi|269210758|gb|EEZ77098.1| peptide chain release factor 1 [Actinomyces sp. oral taxon 848 str.
F0332]
Length = 365
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 5 RRHLSLASSL-FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
R H S A L F + D D +V +I + DI+ R SGPGGQ+V T++ V +THIPTG
Sbjct: 203 RLHTSAAGVLVFAEVD-DPGEV-EIADADIRVDVFRSSGPGGQSVNTTDSAVRITHIPTG 260
Query: 64 IVIKCHQSRSLSENRKTARELLVAQW-DVQVNGEDSLNAQIRR 105
+V+ C +S +NR+ A +L A+ +Q+ + NA +RR
Sbjct: 261 LVVSCQDEKSQIKNREAAMRVLRARLRQMQLEQQAEENAAMRR 303
>gi|317133128|ref|YP_004092442.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
gi|315471107|gb|ADU27711.1| peptide chain release factor 2 [Ethanoligenens harbinense YUAN-3]
Length = 377
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++D S I +DI+ R SG GGQ + KT++ V LTH+PTGI
Sbjct: 215 RRHTSFASVEVMP-EIDDSIEVDIRPEDIKMDVFRSSGAGGQHINKTSSAVRLTHLPTGI 273
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR+ A +L
Sbjct: 274 VVSCQNERSQHQNREMAMRML 294
>gi|126667155|ref|ZP_01738129.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
gi|126628311|gb|EAZ98934.1| peptide chain release factor 2 [Marinobacter sp. ELB17]
Length = 351
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S V +I+ D++ R SG GGQ V +T + V LTH PTGI
Sbjct: 198 RRHTSF-SSVFVAPEVDDSFVIEINPADLRVDVYRASGAGGQHVNRTESAVRLTHNPTGI 256
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ A + L A+
Sbjct: 257 VVACQAGRSQHQNKDQAMKQLKAK 280
>gi|312140591|ref|YP_004007927.1| peptide chain release factor prfb [Rhodococcus equi 103S]
gi|325675787|ref|ZP_08155471.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
gi|311889930|emb|CBH49247.1| peptide chain release factor PrfB [Rhodococcus equi 103S]
gi|325553758|gb|EGD23436.1| peptide chain release factor RF2 [Rhodococcus equi ATCC 33707]
Length = 367
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 231 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|345562081|gb|EGX45153.1| hypothetical protein AOL_s00173g254 [Arthrobotrys oligospora ATCC
24927]
Length = 434
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%)
Query: 17 KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSE 76
+Y D + +ID KD++ +R SG GGQ V +T + V +THIPTGIV+ SRS +
Sbjct: 268 EYGTDDDPLAQIDMKDVKTDVMRASGAGGQHVNRTESAVRMTHIPTGIVVAIQDSRSQHK 327
Query: 77 NRKTARELLVAQ 88
NR +A +L A+
Sbjct: 328 NRSSALTILKAK 339
>gi|417071544|ref|ZP_11950184.1| peptide chain release factor 1, partial [Lactobacillus rhamnosus
MTCC 5462]
gi|328463686|gb|EGF35274.1| peptide chain release factor 1 [Lactobacillus rhamnosus MTCC 5462]
Length = 198
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 33 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 88
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 89 IPTGIVVSMQDERSQQENRARAMQIL 114
>gi|241662572|ref|YP_002980932.1| hypothetical protein Rpic12D_0960 [Ralstonia pickettii 12D]
gi|240864599|gb|ACS62260.1| conserved hypothetical protein [Ralstonia pickettii 12D]
Length = 367
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 215 RHTSF-SSIFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMTML 293
>gi|402486110|ref|ZP_10832942.1| peptide chain release factor 2 [Rhizobium sp. CCGE 510]
gi|401814766|gb|EJT07096.1| peptide chain release factor 2 [Rhizobium sp. CCGE 510]
Length = 322
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWVYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 215 VVQCQQERSQHKNRAKAWDMLRA 237
>gi|363419407|ref|ZP_09307508.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
gi|359737492|gb|EHK86424.1| peptide chain release factor 2 [Rhodococcus pyridinivorans AK37]
Length = 372
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|28198320|ref|NP_778634.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
gi|182680959|ref|YP_001829119.1| peptide chain release factor 2 [Xylella fastidiosa M23]
gi|386084480|ref|YP_006000762.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
fastidiosa GB514]
gi|28056390|gb|AAO28283.1| peptide chain release factor 2 [Xylella fastidiosa Temecula1]
gi|71732589|gb|EAO34642.1| Peptide chain release factor 2 [Xylella fastidiosa subsp. sandyi
Ann-1]
gi|182631069|gb|ACB91845.1| peptide chain release factor 2 [Xylella fastidiosa M23]
gi|307579427|gb|ADN63396.1| peptide chain release factor 2 [Xylella fastidiosa subsp.
fastidiosa GB514]
Length = 302
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 140 RRHTSF-TSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGI 198
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR A ++L A+
Sbjct: 199 VVACQTERSQHANRDRAMKMLAAK 222
>gi|297200074|ref|ZP_06917471.1| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
gi|297147562|gb|EDY54581.2| peptide chain release factor 2 [Streptomyces sviceus ATCC 29083]
Length = 368
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|222085647|ref|YP_002544177.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
gi|221723095|gb|ACM26251.1| peptide chain release factor 2 [Agrobacterium radiobacter K84]
Length = 345
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 179 RRHTSF-SSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 237
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 238 VVQCQQERSQHKNRAKAWDMLRA 260
>gi|366086231|ref|ZP_09452716.1| peptide chain release factor 1 [Lactobacillus zeae KCTC 3804]
Length = 359
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IPTGIV+ RS ENR A ++L
Sbjct: 250 IPTGIVVSMQDERSQQENRARALQIL 275
>gi|15837713|ref|NP_298401.1| peptide chain release factor 2 [Xylella fastidiosa 9a5c]
gi|9106068|gb|AAF83921.1|AE003947_1 peptide chain release factor 2 [Xylella fastidiosa 9a5c]
Length = 338
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 176 RRHTSF-TSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR A ++L A+
Sbjct: 235 VVACQTERSQHANRDRAMKMLAAK 258
>gi|149196339|ref|ZP_01873394.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
gi|149140600|gb|EDM28998.1| peptide chain release factor RF-2 [Lentisphaera araneosa HTCC2155]
Length = 332
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+ D+ ID KD++ R SG GGQ V T++ + LTH+PTGI
Sbjct: 173 RRHTSF-TSIDVVPDIGDEAEVDIDAKDLRVDTFRASGAGGQHVNTTDSAIRLTHLPTGI 231
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 232 VVSCQMERSQHKNRATAMKMLGAK 255
>gi|157376591|ref|YP_001475191.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
gi|189039993|sp|A8FYZ0.1|RF1_SHESH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157318965|gb|ABV38063.1| peptide chain release factor 1 [Shewanella sediminis HAW-EB3]
Length = 361
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 15/100 (15%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 82
S+ +I++ D++ R SG GGQ V KT++ + LTHIP+GIV++C RS +NR A
Sbjct: 214 SEAIEINKGDLKVDTFRASGAGGQHVNKTDSAIRLTHIPSGIVVECQDQRSQHKNRAQAM 273
Query: 83 ELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
+L A+I+ + DEKRR+ +E +R L
Sbjct: 274 SVLT--------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|430003273|emb|CCF19058.1| Peptide chain release factor 2 (RF-2) [Rhizobium sp.]
Length = 342
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +++E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVIDDSINIEVNESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR A ++L A
Sbjct: 235 VVACQQERSQHKNRAKAWDMLRA 257
>gi|326204357|ref|ZP_08194215.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
gi|325985389|gb|EGD46227.1| peptide chain release factor 2 [Clostridium papyrosolvens DSM 2782]
Length = 373
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ +LD + I+ D++ R SG GGQ + KT++ + +THIPTG+
Sbjct: 212 RRHTSFASADVMP-ELDDTIEININPDDLRVDTYRASGAGGQHINKTDSAIRITHIPTGV 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ TA ++L A+
Sbjct: 271 VVSCQTERSQFQNKDTAMKMLKAK 294
>gi|359690548|ref|ZP_09260549.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418750004|ref|ZP_13306291.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
gi|418759704|ref|ZP_13315883.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384113456|gb|EID99721.1| peptide chain release factor 2 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404274158|gb|EJZ41477.1| peptide chain release factor 2 [Leptospira licerasiae str. MMD4847]
Length = 367
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + +LD +I++KDI+ R SG GGQ V T++ V +THIP+GI
Sbjct: 214 RRHTSFVS-VHVSPELDDDINIQIEDKDIRVDVYRSSGAGGQHVNTTDSAVRITHIPSGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 273 VVACQNERSQIKNRDTAFKMLKA 295
>gi|284046044|ref|YP_003396384.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
gi|283950265|gb|ADB53009.1| peptide chain release factor 2 [Conexibacter woesei DSM 14684]
Length = 372
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RR S A D ++V +ID+ D+Q R SG GGQ V KT++ V +TH P
Sbjct: 213 SANRRQTSFAGVEVAPVVEDAAEV-EIDDDDLQVDTYRASGAGGQHVNKTDSAVRITHRP 271
Query: 62 TGIVIKCHQSRSLSENRKTARELL 85
+GIV++C RS S NR TA +L
Sbjct: 272 SGIVVQCQNERSQSSNRATAMAML 295
>gi|71276052|ref|ZP_00652333.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
gi|170729664|ref|YP_001775097.1| peptide chain release factor 2 [Xylella fastidiosa M12]
gi|71163135|gb|EAO12856.1| Peptide chain release factor 2 [Xylella fastidiosa Dixon]
gi|71730787|gb|EAO32860.1| Peptide chain release factor 2 [Xylella fastidiosa subsp. sandyi
Ann-1]
gi|167964457|gb|ACA11467.1| peptide chain release factor RF-2 [Xylella fastidiosa M12]
Length = 338
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 176 RRHTSF-TSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR A ++L A+
Sbjct: 235 VVACQTERSQHANRDRAMKMLAAK 258
>gi|359408232|ref|ZP_09200704.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
gi|356676989|gb|EHI49338.1| peptide chain release factor 2 [SAR116 cluster alpha
proteobacterium HIMB100]
Length = 369
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ ++D + +++EKD++ R SG GGQ V T++ + +THIPT I
Sbjct: 210 RRHTSFAS-VWIYPEVDDNIDIQLEEKDLRVDTYRASGAGGQHVNTTDSAIRITHIPTNI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR TA +L A
Sbjct: 269 VVQCQSDRSQHRNRATALNMLKA 291
>gi|379335403|gb|AFD03384.1| protein chain release factor B [uncultured bacterium W5-51b]
Length = 330
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +D S + ++DI+ R SG GGQ V KT++ V L H P+GI
Sbjct: 172 RRHTSFAS-VFVYPLVDDSIEIDVRDEDIEMEVFRASGAGGQHVNKTSSAVRLRHTPSGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ C Q RS +NR TA ++L A
Sbjct: 231 AVSCQQERSQFKNRATAMKMLKA 253
>gi|418460746|ref|ZP_13031834.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
gi|359739213|gb|EHK88085.1| peptide chain release factor 2 [Saccharomonospora azurea SZMC
14600]
Length = 368
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +
Sbjct: 228 DHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAS 284
Query: 81 ARELLVAQ 88
A ++L A+
Sbjct: 285 AMKVLQAK 292
>gi|422439333|ref|ZP_16516156.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
gi|422470819|ref|ZP_16547319.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|313837661|gb|EFS75375.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA2]
gi|314972601|gb|EFT16698.1| peptide chain release factor 1 [Propionibacterium acnes HL037PA3]
Length = 388
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 1/70 (1%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+
Sbjct: 235 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQLQNK 293
Query: 79 KTARELLVAQ 88
A +L A+
Sbjct: 294 AEAMRMLRAK 303
>gi|121608134|ref|YP_995941.1| peptide chain release factor 2 [Verminephrobacter eiseniae EF01-2]
gi|121552774|gb|ABM56923.1| bacterial peptide chain release factor 2 (bRF-2) [Verminephrobacter
eiseniae EF01-2]
Length = 381
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 229 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTFRSSGAGGQHINKTDSAVRLTHLPTGIV 287
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 288 VQCQDGRSQHGNRDIA 303
>gi|163857078|ref|YP_001631376.1| peptide chain release factor 2 [Bordetella petrii DSM 12804]
gi|163260806|emb|CAP43108.1| peptide chain release factor 2 [Bordetella petrii]
Length = 337
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S ++ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 185 RHTSFAS-VFVYPEVDDSFEIDVNPADLRVDTYRASGAGGQHINKTDSAVRLTHLPTGIV 243
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 244 VQCQNDRSQHRNRAEAMQML 263
>gi|417558869|ref|ZP_12209828.1| Protein chain release factor B [Xylella fastidiosa EB92.1]
gi|338178451|gb|EGO81437.1| Protein chain release factor B [Xylella fastidiosa EB92.1]
Length = 280
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + +I+ D++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 118 RRHTSF-TSVFVSPEVDDNIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGI 176
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR A ++L A+
Sbjct: 177 VVACQTERSQHANRDRAMKMLAAK 200
>gi|332531395|ref|ZP_08407299.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
gi|332039064|gb|EGI75486.1| hypothetical protein HGR_15544 [Hylemonella gracilis ATCC 19624]
Length = 248
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D + +I+ D++ R SG GGQ + KT++ V LTHIPTGIV
Sbjct: 96 RHTSFAS-IFVYPEIDDTIEIEINPADVRTDTFRASGAGGQHINKTDSAVRLTHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 155 VQCQDGRSQHSNRDVA 170
>gi|256372525|ref|YP_003110349.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
10331]
gi|256009109|gb|ACU54676.1| peptide chain release factor 2 [Acidimicrobium ferrooxidans DSM
10331]
Length = 369
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 21/120 (17%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS D +V IDEKD++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 209 RRQTSFASLDVTPLAEDAGEV-VIDEKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDAL 124
V+ C RS +NR A ++LV+ +++++RR E+++ +LDAL
Sbjct: 268 VVSCQNERSQLQNRAKAMQILVS-----------------KLEQRRR---EEQRAQLDAL 307
>gi|453366616|dbj|GAC77990.1| peptide chain release factor 2 [Gordonia malaquae NBRC 108250]
Length = 370
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDLRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKAAAMRVLQA 294
>gi|220925876|ref|YP_002501178.1| hypothetical protein Mnod_6050 [Methylobacterium nodulans ORS 2060]
gi|219950483|gb|ACL60875.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
Length = 375
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D ++ E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSFASVWVYPV-IDDRITIEVKESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR TA +L A
Sbjct: 269 VVACQQERSQHKNRATAWNMLRA 291
>gi|384564721|ref|ZP_10011825.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
gi|384520575|gb|EIE97770.1| peptide chain release factor 2 [Saccharomonospora glauca K62]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +
Sbjct: 228 DHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAS 284
Query: 81 ARELLVAQ 88
A ++L A+
Sbjct: 285 AMKVLQAK 292
>gi|440696583|ref|ZP_20879039.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
gi|440281166|gb|ELP68825.1| peptide chain release factor 2 [Streptomyces turgidiscabies Car8]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|290959957|ref|YP_003491139.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
gi|260649483|emb|CBG72598.1| peptide chain release factor 2 [Streptomyces scabiei 87.22]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|218666919|ref|YP_002424975.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
gi|226739123|sp|B7J4M2.1|RF2_ACIF2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|218519132|gb|ACK79718.1| peptide chain release factor 2, programmed frameshift
[Acidithiobacillus ferrooxidans ATCC 23270]
Length = 365
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S I+ D++ R SG GGQ V KT++ + +TH+P+GI
Sbjct: 212 RRHTSFAS-VFVYPEIDDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPSGI 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR A +L
Sbjct: 271 VVACQTDRSQHKNRAEAMRML 291
>gi|386386064|ref|ZP_10071263.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
gi|385666472|gb|EIF90016.1| peptide chain release factor 2 [Streptomyces tsukubaensis
NRRL18488]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +THIPTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRIDVYRASGPGGQGVNTTDSAVRITHIPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR QE++ R +DALK
Sbjct: 292 A-----------------KLLERRR--QEEQAR-MDALK 310
>gi|365861270|ref|ZP_09401044.1| peptide chain release factor 2 [Streptomyces sp. W007]
gi|364009264|gb|EHM30230.1| peptide chain release factor 2 [Streptomyces sp. W007]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|381164618|ref|ZP_09873848.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
gi|379256523|gb|EHY90449.1| peptide chain release factor 2 [Saccharomonospora azurea NA-128]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 46/68 (67%), Gaps = 3/68 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+ +
Sbjct: 228 DHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAS 284
Query: 81 ARELLVAQ 88
A ++L A+
Sbjct: 285 AMKVLQAK 292
>gi|291445100|ref|ZP_06584490.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
gi|291348047|gb|EFE74951.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
15998]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|182414215|ref|YP_001819281.1| class I peptide chain release factor [Opitutus terrae PB90-1]
gi|177841429|gb|ACB75681.1| Class I peptide chain release factor [Opitutus terrae PB90-1]
Length = 131
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 10/75 (13%)
Query: 31 KDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWD 90
+++ ERFVRGSGPGGQ + KT++ V L H PTG+ ++C RS + NR+ VA W+
Sbjct: 19 EEVDERFVRGSGPGGQKINKTSSTVWLRHGPTGVEVRCQAERSQAANRE------VAWWE 72
Query: 91 VQVNGEDSLNAQIRR 105
+ + L A++RR
Sbjct: 73 LC----EKLEARVRR 83
>gi|398377942|ref|ZP_10536111.1| peptide chain release factor 2 [Rhizobium sp. AP16]
gi|397725869|gb|EJK86313.1| peptide chain release factor 2 [Rhizobium sp. AP16]
Length = 342
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWIYPVVDDSIQIDINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|376261889|ref|YP_005148609.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
gi|373945883|gb|AEY66804.1| peptide chain release factor 2 [Clostridium sp. BNL1100]
Length = 373
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ +LD + I+ D++ R SG GGQ + KT++ + +THIPTG+
Sbjct: 212 RRHTSFASADVMP-ELDDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITHIPTGV 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ TA ++L A+
Sbjct: 271 VVSCQTERSQFQNKDTAMKMLKAK 294
>gi|456385063|gb|EMF50641.1| prfB protein [Streptomyces bottropensis ATCC 25435]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|421747704|ref|ZP_16185388.1| peptide chain release factor 2 [Cupriavidus necator HPC(L)]
gi|409773666|gb|EKN55420.1| peptide chain release factor 2 [Cupriavidus necator HPC(L)]
Length = 248
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 96 RHTSF-SSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRAEAMSML 174
>gi|331007552|ref|ZP_08330709.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
IMCC1989]
gi|330418642|gb|EGG93151.1| tRNA pseudouridine synthase D, TruD [gamma proteobacterium
IMCC1989]
Length = 347
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S +F ++D + +D+ +++E R SG GGQ V KT++ V LTH +GI
Sbjct: 194 RRHTSFCS-VFVSPEIDDNFEVDVDKSEVREDTYRASGAGGQHVNKTDSAVRLTHEASGI 252
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR TA ++L A
Sbjct: 253 VVQCQSQRSQHQNRDTAWKMLRA 275
>gi|170728014|ref|YP_001762040.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
gi|238688639|sp|B1KDU3.1|RF1_SHEWM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169813361|gb|ACA87945.1| peptide chain release factor 1 [Shewanella woodyi ATCC 51908]
Length = 361
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
L+A+I+ + DEKRR+ +E +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSEEESTRRNL 299
>gi|441523265|ref|ZP_21004893.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
gi|441457115|dbj|GAC62854.1| peptide chain release factor 2 [Gordonia sihwensis NBRC 108236]
Length = 370
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|254294252|ref|YP_003060275.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
gi|254042783|gb|ACT59578.1| hypothetical protein Hbal_1892 [Hirschia baltica ATCC 49814]
Length = 370
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S +S LD + +I++KD++ R SG GGQ + KT++ + LTH PTGI
Sbjct: 210 KRHTSFSSVAVSPV-LDDTIEVEIEDKDVRTDTYRASGSGGQHINKTDSAIRLTHAPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR +A +L A+
Sbjct: 269 VVACQSDRSQHKNRASAWNMLRAR 292
>gi|383826565|ref|ZP_09981688.1| peptide chain release factor 1 [Mycobacterium xenopi RIVM700367]
gi|383332371|gb|EID10852.1| peptide chain release factor 1 [Mycobacterium xenopi RIVM700367]
Length = 357
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 58/113 (51%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEIGEV-QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ V + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMVEEQALADASADRASQIRTVDRSER 307
>gi|194289273|ref|YP_002005180.1| peptide chain release factor rf-2 [Cupriavidus taiwanensis LMG
19424]
gi|193223108|emb|CAQ69113.1| peptide chain release factor RF-2 [Cupriavidus taiwanensis LMG
19424]
Length = 357
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 205 RHTSF-SSVFVYPEVDDSFEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 263
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 264 VQCQNDRSQHRNRAEAMSML 283
>gi|167625123|ref|YP_001675417.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
gi|189039991|sp|B0TR27.1|RF1_SHEHH RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|167355145|gb|ABZ77758.1| peptide chain release factor 1 [Shewanella halifaxensis HAW-EB4]
Length = 361
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA 277
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|388567748|ref|ZP_10154178.1| peptide chain release factor 2 [Hydrogenophaga sp. PBC]
gi|388265077|gb|EIK90637.1| peptide chain release factor 2 [Hydrogenophaga sp. PBC]
Length = 300
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 148 RHTSFAS-VFVYPEIDDSIQIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHMPTGIV 206
Query: 66 IKCHQSRSLSENRKTA 81
++C SRS NR A
Sbjct: 207 VQCQDSRSQHSNRDLA 222
>gi|424890804|ref|ZP_18314403.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393173022|gb|EJC73067.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 376
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +TH+PTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|375144499|ref|YP_005006940.1| peptide chain release factor 2 (bRF-2) [Niastella koreensis
GR20-10]
gi|361058545|gb|AEV97536.1| bacterial peptide chain release factor 2 (bRF-2) [Niastella
koreensis GR20-10]
Length = 363
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +D S +++ D++ F R G GGQ V K V L H P+GI
Sbjct: 205 RRHTSFAS-VFAYPLVDDSIAVEVNPADLEWEFYRSGGKGGQNVNKVETAVRLKHHPSGI 263
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C ++R+ ENR+ A ++L
Sbjct: 264 VVECQKARTQGENREMALQML 284
>gi|344199097|ref|YP_004783423.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
gi|343774541|gb|AEM47097.1| peptide chain release factor 2 [Acidithiobacillus ferrivorans SS3]
Length = 365
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S I+ D++ R SG GGQ V KT++ + +TH+P+GI
Sbjct: 212 RRHTSFAS-VFIYPEIDDSFEVDINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPSGI 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR A +L
Sbjct: 271 VVACQTDRSQHKNRAEAMRML 291
>gi|357413121|ref|YP_004924857.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
gi|320010490|gb|ADW05340.1| peptide chain release factor 2 [Streptomyces flavogriseus ATCC
33331]
Length = 368
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|271962992|ref|YP_003337188.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
gi|270506167|gb|ACZ84445.1| peptide chain release factor 2 [Streptosporangium roseum DSM 43021]
Length = 372
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I+E D++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ TA +L
Sbjct: 233 INEDDLRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQLQNKATAMAVL 290
>gi|372268591|ref|ZP_09504639.1| peptide chain release factor 2 [Alteromonas sp. S89]
Length = 248
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + ++D+ ++E R SG GGQ V KT++ V LTHI +GI
Sbjct: 95 RRHTSF-TSVFVSPEIDDNIEIEVDKSQVREDTYRASGAGGQHVNKTDSAVRLTHIESGI 153
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 154 VVACQSERSQHQNRDKAWKMLRAK 177
>gi|342218161|ref|ZP_08710786.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
gi|341590869|gb|EGS34095.1| peptide chain release factor 1 [Megasphaera sp. UPII 135-E]
Length = 360
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 40/60 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+D KD++ + R SG GGQ V KT++ V +THIPTGIV++C RS ENR A +L A
Sbjct: 218 LDMKDVRIDYFRASGAGGQHVNKTSSAVRMTHIPTGIVVECQDERSQLENRAKALRVLKA 277
>gi|326383344|ref|ZP_08205032.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
gi|326198094|gb|EGD55280.1| peptide chain release factor 2 [Gordonia neofelifaecis NRRL
B-59395]
Length = 370
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ A +L A
Sbjct: 235 IDENDVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQLQNKVAAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|239988119|ref|ZP_04708783.1| peptide chain release factor 2 [Streptomyces roseosporus NRRL
11379]
Length = 352
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 275
Query: 87 AQ 88
A+
Sbjct: 276 AK 277
>gi|157962943|ref|YP_001502977.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
gi|189039992|sp|A8H7A5.1|RF1_SHEPA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|157847943|gb|ABV88442.1| peptide chain release factor 1 [Shewanella pealeana ATCC 700345]
Length = 361
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 55/96 (57%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +L
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSVLA 277
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
A+I+ + DEKRR+ +E +R L
Sbjct: 278 --------------ARIQAVEDEKRRSAEESTRRNL 299
>gi|374583718|ref|ZP_09656812.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
gi|374419800|gb|EHQ92235.1| peptide chain release factor 2 [Desulfosporosinus youngiae DSM
17734]
Length = 368
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 52/85 (61%), Gaps = 2/85 (2%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS + + D ++P ID +D++ R G GGQ V KT++ + +TH+PTG
Sbjct: 210 RRHTSFASVDVIPEVAEDNDEIP-IDAEDLRIDTYRSGGAGGQHVNKTDSAIRITHLPTG 268
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV++C RS ++N+ A +L A+
Sbjct: 269 IVVQCQSERSQTQNKAAAMRVLQAK 293
>gi|357389817|ref|YP_004904657.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
gi|311896293|dbj|BAJ28701.1| putative peptide chain release factor 2 [Kitasatospora setae
KM-6054]
Length = 351
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE D++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L A
Sbjct: 217 IDEGDLRIDVYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQA 276
Query: 88 Q 88
+
Sbjct: 277 K 277
>gi|333024883|ref|ZP_08452947.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
gi|332744735|gb|EGJ75176.1| putative peptide chain release factor 2 [Streptomyces sp. Tu6071]
Length = 373
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 234 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 293
Query: 87 AQ 88
A+
Sbjct: 294 AK 295
>gi|427414371|ref|ZP_18904561.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
gi|425714747|gb|EKU77750.1| peptide chain release factor 2 [Veillonella ratti ACS-216-V-Col6b]
Length = 330
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ ++D + +D KD++ R SG GGQ + KT++ + +THIPTG+
Sbjct: 172 RRHTSFAAVDVMP-EIDDTVDIHLDMKDVRVDTYRASGAGGQHINKTDSAIRMTHIPTGV 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +NR+ A +LL A+
Sbjct: 231 VVQCQSERSQIQNREQALKLLRAK 254
>gi|420243661|ref|ZP_14747558.1| peptide chain release factor 2 [Rhizobium sp. CF080]
gi|398058903|gb|EJL50775.1| peptide chain release factor 2 [Rhizobium sp. CF080]
Length = 342
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIP+GI
Sbjct: 176 RRHTSF-SSIWVYPVIDDSINIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPSGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 235 VVQCQQERSQHKNRAKAWDMLRA 257
>gi|410074963|ref|XP_003955064.1| hypothetical protein KAFR_0A04930 [Kazachstania africana CBS
2517]
gi|372461646|emb|CCF55929.1| hypothetical protein KAFR_0A04930 [Kazachstania africana CBS
2517]
Length = 156
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 25 VPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAREL 84
P ++ + ++ G GPGGQ + KTN+ V L HIPTGIV+KC ++RS NR+ ARE
Sbjct: 29 TPDLEPQCVEAFMHGGRGPGGQKINKTNSKVELRHIPTGIVVKCQETRSRERNRQIAREK 88
Query: 85 LVAQWDVQ 92
+ +++Q
Sbjct: 89 MA--YEIQ 94
>gi|418245203|ref|ZP_12871610.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
gi|354510611|gb|EHE83533.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
14067]
Length = 358
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLA 276
Query: 87 A 87
A
Sbjct: 277 A 277
>gi|302521474|ref|ZP_07273816.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
gi|318056789|ref|ZP_07975512.1| peptide chain release factor 2 [Streptomyces sp. SA3_actG]
gi|318081122|ref|ZP_07988454.1| peptide chain release factor 2 [Streptomyces sp. SA3_actF]
gi|302430369|gb|EFL02185.1| peptide chain release factor 2 [Streptomyces sp. SPB78]
Length = 371
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|209548908|ref|YP_002280825.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|424914513|ref|ZP_18337877.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|209534664|gb|ACI54599.1| conserved hypothetical protein [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|392850689|gb|EJB03210.1| peptide chain release factor 2 [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 376
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +TH+PTGI
Sbjct: 210 RRHTSF-SSIWVYPVVDDSIQIEINEGDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 269 VVQCQQERSQHKNRAKAWDMLRA 291
>gi|19552424|ref|NP_600426.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|62390088|ref|YP_225490.1| peptide chain release factor 1 [Corynebacterium glutamicum ATCC
13032]
gi|145295339|ref|YP_001138160.1| peptide chain release factor 1 [Corynebacterium glutamicum R]
gi|417970006|ref|ZP_12610941.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
gi|24418635|sp|Q8NR57.1|RF1_CORGL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223553|sp|A4QDG1.1|RF1_CORGB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|21323967|dbj|BAB98593.1| Protein chain release factor A [Corynebacterium glutamicum ATCC
13032]
gi|41325424|emb|CAF19904.1| PEPTIDE CHAIN RELEASE FACTOR 1 (RF-1) [Corynebacterium glutamicum
ATCC 13032]
gi|140845259|dbj|BAF54258.1| hypothetical protein [Corynebacterium glutamicum R]
gi|344045688|gb|EGV41358.1| peptide chain release factor 1 [Corynebacterium glutamicum S9114]
Length = 358
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ R SG GGQ V T++ V +TH+PTG+V+ C + RS +NR A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGLVVTCQKERSQIQNRARAMQVLA 276
Query: 87 A 87
A
Sbjct: 277 A 277
>gi|160876841|ref|YP_001556157.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|378710055|ref|YP_005274949.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|418022167|ref|ZP_12661154.1| Peptide chain release factor 1 [Shewanella baltica OS625]
gi|189039990|sp|A9L2D4.1|RF1_SHEB9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|160862363|gb|ABX50897.1| peptide chain release factor 1 [Shewanella baltica OS195]
gi|315269044|gb|ADT95897.1| peptide chain release factor 1 [Shewanella baltica OS678]
gi|353538392|gb|EHC07947.1| Peptide chain release factor 1 [Shewanella baltica OS625]
Length = 363
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|411005038|ref|ZP_11381367.1| peptide chain release factor 2 [Streptomyces globisporus C-1027]
Length = 368
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|399018996|ref|ZP_10721146.1| peptide chain release factor 2 [Herbaspirillum sp. CF444]
gi|398098645|gb|EJL88927.1| peptide chain release factor 2 [Herbaspirillum sp. CF444]
Length = 349
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 15/112 (13%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SSLF ++D S I+ D++ R SG GGQ + KT++ V LTH P+GIV
Sbjct: 197 RHTSF-SSLFVYPEVDESFEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHGPSGIV 255
Query: 66 IKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
++C RS NR A WD+ L A++ ++ ++R +++QK
Sbjct: 256 VQCQNDRSQHRNRAEA-------WDM-------LRAKLFELELRKRMSEQQK 293
>gi|392417582|ref|YP_006454187.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
chubuense NBB4]
gi|390617358|gb|AFM18508.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
chubuense NBB4]
Length = 358
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 60/113 (53%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVEQV-QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDV----QVNGEDSLN--AQIRRIDEKRR 111
V+ C RS +N+ A ++L A+ Q + E S + +QIR +D R
Sbjct: 255 VVTCQNERSQLQNKIRAMQVLAARLQALAEEQASAEASADRASQIRTVDRSER 307
>gi|389714676|ref|ZP_10187249.1| peptide chain release factor 2 [Acinetobacter sp. HA]
gi|388609652|gb|EIM38799.1| peptide chain release factor 2 [Acinetobacter sp. HA]
Length = 310
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + +I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFVSPEVDDNIEIEINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|335041017|ref|ZP_08534135.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
gi|334179167|gb|EGL81814.1| Peptide chain release factor 1 [Caldalkalibacillus thermarum
TA2.A1]
Length = 356
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ SGPGGQ+V T + V LTHIPTGIV+ C +S +N++ A ++L
Sbjct: 214 EIDEKDIRVDVFCSSGPGGQSVNTTQSAVRLTHIPTGIVVSCQDEKSQHKNKEKAMKILR 273
Query: 87 AQ-WDVQVNGEDSLNAQIRR 105
A+ +D + + A IR+
Sbjct: 274 ARVYDKYLQEAQNEYASIRK 293
>gi|182438348|ref|YP_001826067.1| peptide chain release factor 2 [Streptomyces griseus subsp. griseus
NBRC 13350]
gi|326778999|ref|ZP_08238264.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
gi|238688991|sp|B1VV08.1|RF2_STRGG RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|178466864|dbj|BAG21384.1| putative peptide chain release factor 2 [Streptomyces griseus
subsp. griseus NBRC 13350]
gi|326659332|gb|EGE44178.1| Peptide chain release factor 2 [Streptomyces griseus XylebKG-1]
Length = 368
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|373497987|ref|ZP_09588503.1| peptide chain release factor 2 [Fusobacterium sp. 12_1B]
gi|371962509|gb|EHO80110.1| peptide chain release factor 2 [Fusobacterium sp. 12_1B]
Length = 328
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D S ID D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 172 KRHTSFASVEVMP-EVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C + RS NR+TA ++L
Sbjct: 231 VVTCQRERSQLNNRETAMKML 251
>gi|153002121|ref|YP_001367802.1| peptide chain release factor 1 [Shewanella baltica OS185]
gi|166223602|sp|A6WSF0.1|RF1_SHEB8 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|151366739|gb|ABS09739.1| peptide chain release factor 1 [Shewanella baltica OS185]
Length = 363
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQAVEDEKRRSAEESTRRSLVA 301
>gi|403737083|ref|ZP_10949957.1| peptide chain release factor 1 [Austwickia chelonae NBRC 105200]
gi|403192744|dbj|GAB76727.1| peptide chain release factor 1 [Austwickia chelonae NBRC 105200]
Length = 360
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 61/113 (53%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L DLD + +I D++ R SGPGGQ+V T++ V +TH+PTG+
Sbjct: 195 RIHTSAAGVLVMP-DLDDPEEVEISPADLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGL 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQW------DVQVNGEDSLNAQIRRIDEKRR 111
V+ C +S +N+++A +L A+ + + D+ +Q+R +D R
Sbjct: 254 VVSCQNEKSQLQNKESALRVLRARLHQMRVDEQEAQAADARRSQVRTVDRSER 306
>gi|401882221|gb|EJT46489.1| hypothetical protein A1Q1_04921 [Trichosporon asahii var. asahii
CBS 2479]
gi|406701426|gb|EKD04572.1| hypothetical protein A1Q2_01144 [Trichosporon asahii var. asahii
CBS 8904]
Length = 379
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S + + D + P +D KD++ +R G GGQ V KT + + LTH+PTGI
Sbjct: 207 RVHTSTITVIVNPIYPDKPEAPLVDPKDVRTDVMRAGGAGGQHVNKTESAIRLTHLPTGI 266
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ SRS +NR A E+L A
Sbjct: 267 TVSMQDSRSQHQNRAWAWEILRA 289
>gi|350560643|ref|ZP_08929483.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349782911|gb|EGZ37194.1| peptide chain release factor 1 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 361
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
++D ++P+I+ D++ R SG GGQ V +T++ V LTH+PTG+V++C RS +N+
Sbjct: 210 EIDEVEMPEINPADLRVDTYRASGAGGQHVNRTDSAVRLTHLPTGLVVECQDERSQHKNK 269
Query: 79 KTARELLVA 87
A +LL A
Sbjct: 270 ARAMKLLAA 278
>gi|404367747|ref|ZP_10973109.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
gi|313688838|gb|EFS25673.1| peptide chain release factor 2 [Fusobacterium ulcerans ATCC 49185]
Length = 328
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D S ID D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 172 KRHTSFASVEVMP-EVDESVEVNIDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C + RS NR+TA ++L
Sbjct: 231 VVTCQRERSQLNNRETAMKML 251
>gi|385800795|ref|YP_005837199.1| peptide chain release factor 2 (bRF-2) [Halanaerobium praevalens
DSM 2228]
gi|309390159|gb|ADO78039.1| bacterial peptide chain release factor 2 (bRF-2) [Halanaerobium
praevalens DSM 2228]
Length = 365
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++D +IDE +++ R SG GGQ V KT++ V +TH PTG+
Sbjct: 209 RRHTSFASVDVMP-EIDSDLEVEIDENNLKIDTYRASGAGGQHVNKTDSAVRITHQPTGV 267
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDE 108
V++C RS +N++TA ++L ++ +++ E AQ +IDE
Sbjct: 268 VVQCQNQRSQHKNKETAMKILSSKL-LELKRE----AQAEKIDE 306
>gi|310659612|ref|YP_003937333.1| PrfB [[Clostridium] sticklandii]
gi|308826390|emb|CBH22428.1| PrfB [[Clostridium] sticklandii]
Length = 328
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD S I+ D++ R SG GGQ V KT + + +TH+PTGI
Sbjct: 170 KRHTSFASVDVIP-ELDDSIEIDINPADLKIDTYRASGAGGQHVNKTESAIRITHLPTGI 228
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS N++TA ++L+A+
Sbjct: 229 VVQCQNQRSQHSNKETAMKMLMAK 252
>gi|351732342|ref|ZP_08950033.1| hypothetical protein AradN_21307 [Acidovorax radicis N35]
Length = 248
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS LF ++D S I+ D++ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 96 RHTSFAS-LFVYPEIDDSIQIDINPADVRTDTYRASGAGGQHINKTDSAVRLTHMPTGIV 154
Query: 66 IKCHQSRSLSENRKTA 81
++C RS NR A
Sbjct: 155 VQCQDGRSQHGNRDIA 170
>gi|407769854|ref|ZP_11117227.1| peptide chain release factor 2 [Thalassospira xiamenensis M-5 = DSM
17429]
gi|407286998|gb|EKF12481.1| peptide chain release factor 2 [Thalassospira xiamenensis M-5 = DSM
17429]
Length = 321
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 1/86 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S +S D + +D KD++ R SG GGQ V +T++ V +THIP
Sbjct: 153 SAARRHTSFSSCWVYPVIDDDINIEVLD-KDLRIDTYRASGAGGQHVNRTDSAVRITHIP 211
Query: 62 TGIVIKCHQSRSLSENRKTARELLVA 87
TGIV +C RS +NR TA ++L A
Sbjct: 212 TGIVAQCQNDRSQHKNRDTAMKMLKA 237
>gi|403253475|ref|ZP_10919776.1| peptide chain release factor 2 [Thermotoga sp. EMP]
gi|402811009|gb|EJX25497.1| peptide chain release factor 2 [Thermotoga sp. EMP]
Length = 367
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS + +P+ID+ +D++ R SG GGQ V KT + V
Sbjct: 209 RRHTSFAS---------VNVIPEIDDDVDIEIKPEDLKIETFRASGHGGQYVNKTESAVR 259
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+TH+PTGIV+ C RS +N++TA ++L A+
Sbjct: 260 ITHLPTGIVVSCQNERSQHQNKQTALKILKAK 291
>gi|220929619|ref|YP_002506528.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
gi|219999947|gb|ACL76548.1| hypothetical protein Ccel_2206 [Clostridium cellulolyticum H10]
Length = 373
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS L +LD + I+ D++ R SG GGQ + KT++ + +THIPTG+
Sbjct: 212 RRHTSFAS-LDVMPELDDTIEININPDDLRIDTYRASGAGGQHINKTDSAIRITHIPTGV 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ TA ++L A+
Sbjct: 271 VVSCQTERSQFQNKDTAMKMLKAK 294
>gi|88607366|ref|YP_505078.1| peptide chain release factor 2, programmed frameshift, partial
[Anaplasma phagocytophilum HZ]
gi|88598429|gb|ABD43899.1| peptide chain release factor 2 [Anaplasma phagocytophilum HZ]
Length = 376
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +D+ KI EKD++ R SG GGQ V KT + V +THIP+G+
Sbjct: 213 KRHTSFASVEVSPV-VDHEIDIKILEKDLRIDTYRASGAGGQHVNKTESAVRITHIPSGM 271
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C SRS +NR A LL
Sbjct: 272 VVQCQTSRSQHQNRAEAYSLL 292
>gi|406908239|gb|EKD48805.1| Peptide chain release factor 2 [uncultured bacterium]
Length = 362
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ + + +ID KD++ R G GGQ V KT++ V +THIP+GI
Sbjct: 208 RRHTSFAAVTVAPETPEITI--EIDPKDLRIDTYRAGGAGGQHVNKTDSAVRITHIPSGI 265
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V +C RS ++N++TA ++L A
Sbjct: 266 VTQCQNERSQTQNKETAMKMLFA 288
>gi|229491026|ref|ZP_04384859.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|453069985|ref|ZP_21973238.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
gi|259585230|sp|C0ZXD0.1|RF2_RHOE4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226184911|dbj|BAH33015.1| peptide chain release factor 2 [Rhodococcus erythropolis PR4]
gi|229322142|gb|EEN87930.1| peptide chain release factor 2 [Rhodococcus erythropolis SK121]
gi|452762530|gb|EME20826.1| peptide chain release factor 2 [Rhodococcus qingshengii BKS 20-40]
Length = 368
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 42/62 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I+E DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 230 EINENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 289
Query: 87 AQ 88
A+
Sbjct: 290 AK 291
>gi|163759373|ref|ZP_02166459.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
gi|162283777|gb|EDQ34062.1| peptide chain release factor 2 [Hoeflea phototrophica DFL-43]
Length = 321
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E + + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWTYPVIDDSIDVDINESECRIDTYRASGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +NR A ++L A
Sbjct: 215 VVQCQQERSQHKNRAKAWDMLRA 237
>gi|170289031|ref|YP_001739269.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281412649|ref|YP_003346728.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|418045638|ref|ZP_12683733.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|238688848|sp|B1LB88.1|RF2_THESQ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|170176534|gb|ACB09586.1| peptide chain release factor 2 [Thermotoga sp. RQ2]
gi|281373752|gb|ADA67314.1| peptide chain release factor 2 [Thermotoga naphthophila RKU-10]
gi|351676523|gb|EHA59676.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
Length = 367
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS + +P+ID+ +D++ R SG GGQ V KT + V
Sbjct: 209 RRHTSFAS---------VNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVR 259
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+TH+PTGIV+ C RS +N++TA ++L A+
Sbjct: 260 ITHLPTGIVVSCQNERSQHQNKQTALKILKAK 291
>gi|82703392|ref|YP_412958.1| peptide chain release factor 2 [Nitrosospira multiformis ATCC
25196]
gi|82411457|gb|ABB75566.1| bacterial peptide chain release factor 2 (bRF-2) [Nitrosospira
multiformis ATCC 25196]
Length = 310
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 157 RRHTSFAS-VFVYPEVDETIEIDINPADLRVDTFRASGAGGQHINKTDSAVRITHNPTGI 215
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS NR A +L ++ A++R+ +E+++A ++ K
Sbjct: 216 VVQCQSGRSQHRNRADAMAMLKSRL---------YEAELRKRNEEKQAIEDTK 259
>gi|15644327|ref|NP_229379.1| peptide chain release factor 2 [Thermotoga maritima MSB8]
gi|7388057|sp|Q9X1R5.1|RF2_THEMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|4982148|gb|AAD36646.1|AE001802_15 peptide chain release factor RF-2 [Thermotoga maritima MSB8]
Length = 369
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS + +P+ID+ +D++ R SG GGQ V KT + V
Sbjct: 211 RRHTSFAS---------VNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVR 261
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+TH+PTGIV+ C RS +N++TA ++L A+
Sbjct: 262 ITHLPTGIVVSCQNERSQHQNKQTALKILKAK 293
>gi|296268776|ref|YP_003651408.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
gi|296091563|gb|ADG87515.1| peptide chain release factor 2 [Thermobispora bispora DSM 43833]
Length = 378
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I+E +I+ R SGPGGQ V T++ V +TH+PTGIV+ C RS +NR TA +L
Sbjct: 232 EINEDEIRIDVYRSSGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQLQNRATAMAVLK 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|312199813|ref|YP_004019874.1| peptide chain release factor 2 [Frankia sp. EuI1c]
gi|311231149|gb|ADP84004.1| peptide chain release factor 2 [Frankia sp. EuI1c]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRVDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMVVLQA 287
Query: 88 Q 88
+
Sbjct: 288 K 288
>gi|59802262|ref|YP_208974.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA 1090]
gi|194099790|ref|YP_002002925.1| peptide chain release factor 2 [Neisseria gonorrhoeae NCCP11945]
gi|240013088|ref|ZP_04720001.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI18]
gi|240017657|ref|ZP_04724197.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA6140]
gi|240122278|ref|ZP_04735240.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID24-1]
gi|254493466|ref|ZP_05106637.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
gi|268595771|ref|ZP_06129938.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
gi|268597961|ref|ZP_06132128.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
gi|268600216|ref|ZP_06134383.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
gi|268602456|ref|ZP_06136623.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
gi|268604723|ref|ZP_06138890.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
gi|268681042|ref|ZP_06147904.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
gi|268685277|ref|ZP_06152139.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
gi|268685523|ref|ZP_06152385.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
gi|291044943|ref|ZP_06570652.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
gi|293398016|ref|ZP_06642222.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
gi|385336717|ref|YP_005890664.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
gi|75432344|sp|Q5F5H5.1|RF2_NEIG1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|238693228|sp|B4RQU4.1|RF2_NEIG2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|59719157|gb|AAW90562.1| putative peptide chain release factor 2 [Neisseria gonorrhoeae FA
1090]
gi|193935080|gb|ACF30904.1| PrfB [Neisseria gonorrhoeae NCCP11945]
gi|226512506|gb|EEH61851.1| peptide chain release factor 2 [Neisseria gonorrhoeae 1291]
gi|268549160|gb|EEZ44578.1| peptide chain release factor 2 [Neisseria gonorrhoeae 35/02]
gi|268551749|gb|EEZ46768.1| peptide chain release factor 2 [Neisseria gonorrhoeae FA19]
gi|268584347|gb|EEZ49023.1| peptide chain release factor 2 [Neisseria gonorrhoeae MS11]
gi|268586587|gb|EEZ51263.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID18]
gi|268588854|gb|EEZ53530.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID1]
gi|268621326|gb|EEZ53726.1| peptide chain release factor 2 [Neisseria gonorrhoeae PID332]
gi|268625561|gb|EEZ57961.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-92-679]
gi|268625807|gb|EEZ58207.1| peptide chain release factor 2 [Neisseria gonorrhoeae SK-93-1035]
gi|291011837|gb|EFE03833.1| peptide chain release factor 2 [Neisseria gonorrhoeae DGI2]
gi|291611962|gb|EFF41031.1| peptide chain release factor 2 [Neisseria gonorrhoeae F62]
gi|317165260|gb|ADV08801.1| peptide chain release factor 2 [Neisseria gonorrhoeae TCDC-NG08107]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|313669297|ref|YP_004049581.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
gi|313006759|emb|CBN88229.1| peptide chain release factor 2 [Neisseria lactamica 020-06]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|237747768|ref|ZP_04578248.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
gi|229379130|gb|EEO29221.1| peptide chain release factor 2 [Oxalobacter formigenes OXCC13]
Length = 349
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 46/80 (57%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S S LF ++D S I+ D++ R SG GGQ + KT++ V LTH PTGIV
Sbjct: 197 RHTSFCS-LFVYPEVDDSIEIDINPADVRVDTYRASGAGGQHINKTDSAVRLTHAPTGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A E+L
Sbjct: 256 VQCQNDRSQHRNRADAWEML 275
>gi|145589652|ref|YP_001156249.1| peptide chain release factor 2 [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145048058|gb|ABP34685.1| bacterial peptide chain release factor 2 (bRF-2) [Polynucleobacter
necessarius subsp. asymbioticus QLW-P1DMWA-1]
Length = 349
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS ++ ++D S ++ DI+ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 197 RHTSFAS-IYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSAVRLTHLPTGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 256 VQCQNDRSQHRNRAEAMTML 275
>gi|327398507|ref|YP_004339376.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
gi|327181136|gb|AEA33317.1| peptide chain release factor 2 [Hippea maritima DSM 10411]
Length = 359
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D +++ ID KD++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 204 RRHTSFASVSVLPEINDDTEI-DIDPKDLKIDTFRASGAGGQHVNKTDSAIRITHIPTGI 262
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ A ++L A+
Sbjct: 263 VVSCQNERSQHKNKAFALKILKAK 286
>gi|161871001|ref|YP_001600181.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
gi|161596554|gb|ABX74214.1| peptide chain release factor 2 [Neisseria meningitidis 053442]
Length = 352
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 199 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 257
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 258 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 301
>gi|357417571|ref|YP_004930591.1| peptide chain release factor 2 [Pseudoxanthomonas spadix BD-a59]
gi|355335149|gb|AER56550.1| peptide chain release factor 2 [Pseudoxanthomonas spadix BD-a59]
Length = 286
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 124 RRHTSF-TSVFVSPEIDDNIQIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 182
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR+ A ++L A+
Sbjct: 183 VVACQTGRSQHQNRENAMKMLAAK 206
>gi|330991179|ref|ZP_08315132.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
gi|329761765|gb|EGG78256.1| Peptide chain release factor 2 [Gluconacetobacter sp. SXCC-1]
Length = 333
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 167 RRQTSFASVWVYPV-VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGI 225
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 226 VVACQTDRSQHRNRATAMTMLKA 248
>gi|261401531|ref|ZP_05987656.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
gi|269208367|gb|EEZ74822.1| peptide chain release factor 2 [Neisseria lactamica ATCC 23970]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|15677951|ref|NP_275123.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
gi|416198729|ref|ZP_11619096.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
gi|427828244|ref|ZP_18995262.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|433466118|ref|ZP_20423586.1| peptide chain release factor 2 [Neisseria meningitidis NM422]
gi|433489313|ref|ZP_20446458.1| peptide chain release factor 2 [Neisseria meningitidis M13255]
gi|433491493|ref|ZP_20448602.1| peptide chain release factor 2 [Neisseria meningitidis NM418]
gi|433506051|ref|ZP_20462979.1| peptide chain release factor 2 [Neisseria meningitidis 9506]
gi|433508129|ref|ZP_20465023.1| peptide chain release factor 2 [Neisseria meningitidis 9757]
gi|433510297|ref|ZP_20467149.1| peptide chain release factor 2 [Neisseria meningitidis 12888]
gi|433512387|ref|ZP_20469194.1| peptide chain release factor 2 [Neisseria meningitidis 4119]
gi|24638159|sp|Q9JXB3.1|RF2_NEIMB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|7227395|gb|AAF42446.1| peptide chain release factor 2 [Neisseria meningitidis MC58]
gi|316984027|gb|EFV63006.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|325139451|gb|EGC61991.1| peptide chain release factor 2 [Neisseria meningitidis CU385]
gi|432200320|gb|ELK56417.1| peptide chain release factor 2 [Neisseria meningitidis NM422]
gi|432219966|gb|ELK75794.1| peptide chain release factor 2 [Neisseria meningitidis M13255]
gi|432225245|gb|ELK80998.1| peptide chain release factor 2 [Neisseria meningitidis NM418]
gi|432238575|gb|ELK94141.1| peptide chain release factor 2 [Neisseria meningitidis 9506]
gi|432238711|gb|ELK94276.1| peptide chain release factor 2 [Neisseria meningitidis 9757]
gi|432244141|gb|ELK99637.1| peptide chain release factor 2 [Neisseria meningitidis 12888]
gi|432244520|gb|ELL00008.1| peptide chain release factor 2 [Neisseria meningitidis 4119]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|404442941|ref|ZP_11008116.1| peptide chain release factor 1 [Mycobacterium vaccae ATCC 25954]
gi|403656367|gb|EJZ11181.1| peptide chain release factor 1 [Mycobacterium vaccae ATCC 25954]
Length = 357
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVEQV-QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQW------DVQVNGEDSLNAQIRRIDEKRR 111
V+ C RS +N+ A ++L A+ Q + +QIR +D R
Sbjct: 255 VVTCQNERSQLQNKARAMQVLAARLQALQEEQAQADASADRASQIRTVDRSER 307
>gi|255066677|ref|ZP_05318532.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
gi|255049005|gb|EET44469.1| peptide chain release factor 2 [Neisseria sicca ATCC 29256]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|187927990|ref|YP_001898477.1| hypothetical protein Rpic_0895 [Ralstonia pickettii 12J]
gi|238691788|sp|B2U8V1.1|RF2_RALPJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|187724880|gb|ACD26045.1| conserved hypothetical protein [Ralstonia pickettii 12J]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 215 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMTML 293
>gi|148270343|ref|YP_001244803.1| peptide chain release factor 2 [Thermotoga petrophila RKU-1]
gi|166225119|sp|A5IM04.1|RF2_THEP1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|147735887|gb|ABQ47227.1| bacterial peptide chain release factor 2 (bRF-2) [Thermotoga
petrophila RKU-1]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 52/92 (56%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDE--------KDIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S AS + +P+ID+ +D++ R SG GGQ V KT + V
Sbjct: 209 RRHTSFAS---------VNVIPEIDDDVDIEIRPEDLKIETFRASGHGGQYVNKTESAVR 259
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+TH+PTGIV+ C RS +N++TA ++L A+
Sbjct: 260 ITHLPTGIVVSCQNERSQHQNKQTALKILKAK 291
>gi|456063655|ref|YP_007502625.1| peptide chain release factor 2 [beta proteobacterium CB]
gi|455440952|gb|AGG33890.1| peptide chain release factor 2 [beta proteobacterium CB]
Length = 349
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS ++ ++D S ++ DI+ R SG GGQ + KT++ V LTH+PTGIV
Sbjct: 197 RHTSFAS-IYVYPEIDDSIEIDVNPADIRTDTYRASGAGGQHINKTDSAVRLTHLPTGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 256 VQCQNDRSQHRNRAEAMTML 275
>gi|349701070|ref|ZP_08902699.1| peptide chain release factor 2 [Gluconacetobacter europaeus LMG
18494]
Length = 333
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 167 RRQTSFASVWVYPV-VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGI 225
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 226 VVACQTDRSQHRNRATAMTMLKA 248
>gi|315638344|ref|ZP_07893523.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
gi|315481555|gb|EFU72180.1| peptide chain release factor RF2 [Campylobacter upsaliensis JV21]
Length = 370
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ +LD +I+EKD++ F R SG GGQ V KT + V +THIPT I
Sbjct: 211 RRHTSF-SSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTNI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 270 VVQCQNDRSQHKNKATAFKML 290
>gi|238060791|ref|ZP_04605500.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
gi|237882602|gb|EEP71430.1| peptide chain release factor 1 [Micromonospora sp. ATCC 39149]
Length = 362
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 58/115 (50%), Gaps = 12/115 (10%)
Query: 5 RRHLSLASSLF--RKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPT 62
R H S A L D+D S +D D++ R SGPGGQ+V T++ V +TH+PT
Sbjct: 196 RIHTSAAGVLVLPEAEDVDVS----VDPNDLRIDVFRSSGPGGQSVNTTDSAVRITHVPT 251
Query: 63 GIVIKCHQSRSLSENRKTARELLVAQW------DVQVNGEDSLNAQIRRIDEKRR 111
GIV+ C +S +NR+ A +L A+ D+ AQ+R +D R
Sbjct: 252 GIVVSCQNEKSQLQNREQAMRILRARLLAAAQEQADAAASDARKAQVRTVDRSER 306
>gi|385856145|ref|YP_005902658.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
gi|416175157|ref|ZP_11609418.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
gi|416185221|ref|ZP_11613395.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
gi|325129251|gb|EGC52090.1| peptide chain release factor 2 [Neisseria meningitidis OX99.30304]
gi|325133309|gb|EGC55975.1| peptide chain release factor 2 [Neisseria meningitidis M13399]
gi|325205086|gb|ADZ00540.1| peptide chain release factor 2 [Neisseria meningitidis M01-240355]
Length = 341
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 188 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 246
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 247 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 290
>gi|254804065|ref|YP_003082286.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
gi|385852212|ref|YP_005898727.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
gi|416215034|ref|ZP_11623245.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
gi|418289303|ref|ZP_12901654.1| peptide chain release factor 2 [Neisseria meningitidis NM233]
gi|418291561|ref|ZP_12903546.1| peptide chain release factor 2 [Neisseria meningitidis NM220]
gi|421560151|ref|ZP_16006014.1| peptide chain release factor 2 [Neisseria meningitidis 92045]
gi|421862691|ref|ZP_16294396.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|433470278|ref|ZP_20427683.1| peptide chain release factor 2 [Neisseria meningitidis 98080]
gi|254667607|emb|CBA03375.1| peptide chain release factor 2 [Neisseria meningitidis alpha14]
gi|254673936|emb|CBA09720.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha275]
gi|309379815|emb|CBX21591.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|325143543|gb|EGC65864.1| peptide chain release factor 2 [Neisseria meningitidis M01-240013]
gi|325207035|gb|ADZ02488.1| peptide chain release factor 2 [Neisseria meningitidis M04-240196]
gi|372199674|gb|EHP13888.1| peptide chain release factor 2 [Neisseria meningitidis NM220]
gi|372199890|gb|EHP14055.1| peptide chain release factor 2 [Neisseria meningitidis NM233]
gi|389606895|emb|CCA45806.1| peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha522]
gi|402333807|gb|EJU69105.1| peptide chain release factor 2 [Neisseria meningitidis 92045]
gi|432200812|gb|ELK56901.1| peptide chain release factor 2 [Neisseria meningitidis 98080]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|153874211|ref|ZP_02002515.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
gi|152069325|gb|EDN67485.1| Peptide chain release factor 1 [Beggiatoa sp. PS]
Length = 361
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/56 (53%), Positives = 38/56 (67%)
Query: 32 DIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
DI+E R SG GGQ V KT++ + LTH+PTGIVI+C RS +NR A+ LL A
Sbjct: 223 DIREDTFRASGAGGQHVNKTDSAIRLTHLPTGIVIECQDERSQHKNRARAKSLLQA 278
>gi|119715500|ref|YP_922465.1| peptide chain release factor 2 [Nocardioides sp. JS614]
gi|119536161|gb|ABL80778.1| bacterial peptide chain release factor 2 (bRF-2) [Nocardioides sp.
JS614]
Length = 375
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 37/55 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
+IDE DI+ R GPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A
Sbjct: 235 EIDENDIRTDVFRSGGPGGQSVNTTDSAVRLTHIPTGIVVSCQNEKSQLQNKASA 289
>gi|375335765|ref|ZP_09777109.1| peptide chain release factor 2 [Succinivibrionaceae bacterium WG-1]
Length = 248
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S+ F D+D I+ D++ R SG GGQ + KT++ V +THIPTGI
Sbjct: 95 RRHTSFCSA-FVYPDVDEHIEVTINPADLRIDIYRASGAGGQHINKTDSAVRITHIPTGI 153
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR A + L
Sbjct: 154 VVQCQNERSQHQNRDQAMKQL 174
>gi|298370446|ref|ZP_06981762.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
F0314]
gi|298281906|gb|EFI23395.1| peptide chain release factor 2 [Neisseria sp. oral taxon 014 str.
F0314]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|121635783|ref|YP_976028.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
gi|261378556|ref|ZP_05983129.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
gi|304388773|ref|ZP_07370830.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
13091]
gi|385325066|ref|YP_005879505.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
8013]
gi|385329369|ref|YP_005883672.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
gi|416180255|ref|ZP_11611396.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
gi|421539101|ref|ZP_15985272.1| peptide chain release factor 2 [Neisseria meningitidis 93003]
gi|421539173|ref|ZP_15985340.1| peptide chain release factor 2 [Neisseria meningitidis 93004]
gi|421543390|ref|ZP_15989485.1| peptide chain release factor 2 [Neisseria meningitidis NM255]
gi|421545462|ref|ZP_15991525.1| peptide chain release factor 2 [Neisseria meningitidis NM140]
gi|421547513|ref|ZP_15993548.1| peptide chain release factor 2 [Neisseria meningitidis NM183]
gi|421549545|ref|ZP_15995558.1| peptide chain release factor 2 [Neisseria meningitidis NM2781]
gi|421551733|ref|ZP_15997718.1| peptide chain release factor 2 [Neisseria meningitidis NM576]
gi|421555908|ref|ZP_16001832.1| peptide chain release factor 2 [Neisseria meningitidis 98008]
gi|421562163|ref|ZP_16007999.1| peptide chain release factor 2 [Neisseria meningitidis NM2657]
gi|421562220|ref|ZP_16008050.1| peptide chain release factor 2 [Neisseria meningitidis NM2795]
gi|421907781|ref|ZP_16337650.1| Peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha704]
gi|433468133|ref|ZP_20425579.1| peptide chain release factor 2 [Neisseria meningitidis 87255]
gi|433474464|ref|ZP_20431816.1| peptide chain release factor 2 [Neisseria meningitidis 97021]
gi|433482900|ref|ZP_20440148.1| peptide chain release factor 2 [Neisseria meningitidis 2006087]
gi|433485018|ref|ZP_20442230.1| peptide chain release factor 2 [Neisseria meningitidis 2002038]
gi|433487145|ref|ZP_20444330.1| peptide chain release factor 2 [Neisseria meningitidis 97014]
gi|433493572|ref|ZP_20450653.1| peptide chain release factor 2 [Neisseria meningitidis NM586]
gi|433495624|ref|ZP_20452681.1| peptide chain release factor 2 [Neisseria meningitidis NM762]
gi|433497692|ref|ZP_20454717.1| peptide chain release factor 2 [Neisseria meningitidis M7089]
gi|433499738|ref|ZP_20456739.1| peptide chain release factor 2 [Neisseria meningitidis M7124]
gi|433501807|ref|ZP_20458786.1| peptide chain release factor 2 [Neisseria meningitidis NM174]
gi|433503842|ref|ZP_20460793.1| peptide chain release factor 2 [Neisseria meningitidis NM126]
gi|433537744|ref|ZP_20494235.1| peptide chain release factor 2 [Neisseria meningitidis 77221]
gi|166225113|sp|A1KWK6.1|RF2_NEIMF RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|120867489|emb|CAM11266.1| peptide chain release factor 2 [Neisseria meningitidis FAM18]
gi|254671300|emb|CBA08663.1| peptide chain release factor RF-2 [Neisseria meningitidis alpha153]
gi|261393453|emb|CAX51098.1| peptide chain release factor II (RF-2) [Neisseria meningitidis
8013]
gi|269145108|gb|EEZ71526.1| peptide chain release factor 2 [Neisseria cinerea ATCC 14685]
gi|304337265|gb|EFM03442.1| peptide chain release factor RF2 [Neisseria meningitidis ATCC
13091]
gi|308390220|gb|ADO32540.1| peptide chain release factor 2 [Neisseria meningitidis alpha710]
gi|325131224|gb|EGC53936.1| peptide chain release factor 2 [Neisseria meningitidis M6190]
gi|393291096|emb|CCI73657.1| Peptide chain release factor 1 RF-1 [Neisseria meningitidis
alpha704]
gi|402315036|gb|EJU50603.1| peptide chain release factor 2 [Neisseria meningitidis NM255]
gi|402315213|gb|EJU50779.1| peptide chain release factor 2 [Neisseria meningitidis 93003]
gi|402320823|gb|EJU56304.1| peptide chain release factor 2 [Neisseria meningitidis NM183]
gi|402321009|gb|EJU56489.1| peptide chain release factor 2 [Neisseria meningitidis NM140]
gi|402322449|gb|EJU57909.1| peptide chain release factor 2 [Neisseria meningitidis 93004]
gi|402323252|gb|EJU58698.1| peptide chain release factor 2 [Neisseria meningitidis NM2781]
gi|402328464|gb|EJU63834.1| peptide chain release factor 2 [Neisseria meningitidis 98008]
gi|402333294|gb|EJU68600.1| peptide chain release factor 2 [Neisseria meningitidis NM576]
gi|402335552|gb|EJU70817.1| peptide chain release factor 2 [Neisseria meningitidis NM2657]
gi|402343348|gb|EJU78495.1| peptide chain release factor 2 [Neisseria meningitidis NM2795]
gi|432200448|gb|ELK56539.1| peptide chain release factor 2 [Neisseria meningitidis 87255]
gi|432207120|gb|ELK63115.1| peptide chain release factor 2 [Neisseria meningitidis 97021]
gi|432213558|gb|ELK69474.1| peptide chain release factor 2 [Neisseria meningitidis 2006087]
gi|432218621|gb|ELK74475.1| peptide chain release factor 2 [Neisseria meningitidis 2002038]
gi|432219790|gb|ELK75625.1| peptide chain release factor 2 [Neisseria meningitidis 97014]
gi|432225632|gb|ELK81373.1| peptide chain release factor 2 [Neisseria meningitidis NM586]
gi|432227010|gb|ELK82725.1| peptide chain release factor 2 [Neisseria meningitidis NM762]
gi|432231631|gb|ELK87290.1| peptide chain release factor 2 [Neisseria meningitidis M7089]
gi|432232421|gb|ELK88066.1| peptide chain release factor 2 [Neisseria meningitidis M7124]
gi|432232808|gb|ELK88444.1| peptide chain release factor 2 [Neisseria meningitidis NM174]
gi|432238116|gb|ELK93692.1| peptide chain release factor 2 [Neisseria meningitidis NM126]
gi|432270493|gb|ELL25631.1| peptide chain release factor 2 [Neisseria meningitidis 77221]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|54293184|ref|YP_125599.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
gi|53753016|emb|CAH14459.1| hypothetical protein lpl0230 [Legionella pneumophila str. Lens]
Length = 136
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I E D+ E+F+ SG GGQ + KT + V L H+PTG+ +KC +SRS +NR AR+ L
Sbjct: 19 IYETDLSEKFILSSGKGGQKLHKTASTVYLKHLPTGMEVKCQESRSREDNRYFARQRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
+ + E + Q
Sbjct: 79 KLQAVFSDEKTKTQQ 93
>gi|421555995|ref|ZP_16001914.1| peptide chain release factor 2 [Neisseria meningitidis 80179]
gi|402338402|gb|EJU73636.1| peptide chain release factor 2 [Neisseria meningitidis 80179]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|419798487|ref|ZP_14323894.1| peptide chain release factor 2 [Neisseria sicca VK64]
gi|385694535|gb|EIG25132.1| peptide chain release factor 2 [Neisseria sicca VK64]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|345000024|ref|YP_004802878.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
gi|344315650|gb|AEN10338.1| peptide chain release factor 2 [Streptomyces sp. SirexAA-E]
Length = 352
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V LTH+PTGIV+ C RS +N+ +A +L
Sbjct: 216 EIDESELRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVVSCQNERSQIQNKASAMNVLQ 275
Query: 87 AQ 88
A+
Sbjct: 276 AK 277
>gi|297202390|ref|ZP_06919787.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
gi|197710089|gb|EDY54123.1| peptide chain release factor 1 [Streptomyces sviceus ATCC 29083]
Length = 358
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 81
+I+ D++ R SGPGGQ+V T++ V +THIPTG+V C +S +N++ A
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVASCQNEKSQLQNKEQALRILR 277
Query: 82 -RELLVAQWDVQVNGEDSLNAQIRRID 107
R L AQ + + N D+ +Q+R +D
Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVD 304
>gi|349687350|ref|ZP_08898492.1| peptide chain release factor 2 [Gluconacetobacter oboediens 174Bp2]
Length = 333
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 167 RRQTSFASVWVYPV-VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGI 225
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 226 VVACQTDRSQHRNRATAMTMLKA 248
>gi|385340970|ref|YP_005894842.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
gi|385342908|ref|YP_005896779.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
gi|416165527|ref|ZP_11607456.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
gi|416193760|ref|ZP_11617316.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
gi|416209636|ref|ZP_11621272.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
gi|325127235|gb|EGC50173.1| peptide chain release factor 2 [Neisseria meningitidis N1568]
gi|325137398|gb|EGC59986.1| peptide chain release factor 2 [Neisseria meningitidis ES14902]
gi|325141306|gb|EGC63796.1| peptide chain release factor 2 [Neisseria meningitidis 961-5945]
gi|325199214|gb|ADY94670.1| peptide chain release factor 2 [Neisseria meningitidis G2136]
gi|325203114|gb|ADY98568.1| peptide chain release factor 2 [Neisseria meningitidis M01-240149]
Length = 341
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 188 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 246
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 247 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 290
>gi|113867189|ref|YP_725678.1| protein chain release factor B [Ralstonia eutropha H16]
gi|113525965|emb|CAJ92310.1| protein chain release factor B (RF-2) [Ralstonia eutropha H16]
Length = 357
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 205 RHTSF-SSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 263
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 264 VQCQNDRSQHRNRAEAMSML 283
>gi|433522855|ref|ZP_20479533.1| peptide chain release factor 2 [Neisseria meningitidis 61103]
gi|432257007|gb|ELL12313.1| peptide chain release factor 2 [Neisseria meningitidis 61103]
Length = 374
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|294084599|ref|YP_003551357.1| protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292664172|gb|ADE39273.1| Protein chain release factor B [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 369
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ D ++ ++++KD++ R SG GGQ V KT++ + +TH+PT I
Sbjct: 210 RRHTSFASAWVYPVVDDNIEI-EVEDKDLRIDTYRASGAGGQHVNKTDSAIRITHLPTNI 268
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR TA +L A
Sbjct: 269 VVQCQNDRSQHRNRATAFNMLKA 291
>gi|241760713|ref|ZP_04758805.1| peptide chain release factor 2 [Neisseria flavescens SK114]
gi|241318894|gb|EER55420.1| peptide chain release factor 2 [Neisseria flavescens SK114]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|225077011|ref|ZP_03720210.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
NRL30031/H210]
gi|261379582|ref|ZP_05984155.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
gi|224951568|gb|EEG32777.1| hypothetical protein NEIFLAOT_02063 [Neisseria flavescens
NRL30031/H210]
gi|284798056|gb|EFC53403.1| peptide chain release factor 2 [Neisseria subflava NJ9703]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|218767251|ref|YP_002341763.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
gi|385339042|ref|YP_005892915.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
2594]
gi|421551716|ref|ZP_15997703.1| peptide chain release factor 2 [Neisseria meningitidis 69166]
gi|421567966|ref|ZP_16013697.1| peptide chain release factor 2 [Neisseria meningitidis NM3001]
gi|433472425|ref|ZP_20429801.1| peptide chain release factor 2 [Neisseria meningitidis 68094]
gi|433476620|ref|ZP_20433951.1| peptide chain release factor 2 [Neisseria meningitidis 88050]
gi|433478750|ref|ZP_20436056.1| peptide chain release factor 2 [Neisseria meningitidis 70012]
gi|433480820|ref|ZP_20438097.1| peptide chain release factor 2 [Neisseria meningitidis 63041]
gi|433515030|ref|ZP_20471804.1| peptide chain release factor 2 [Neisseria meningitidis 2004090]
gi|433518296|ref|ZP_20475035.1| peptide chain release factor 2 [Neisseria meningitidis 96023]
gi|433518837|ref|ZP_20475566.1| peptide chain release factor 2 [Neisseria meningitidis 65014]
gi|433525061|ref|ZP_20481712.1| peptide chain release factor 2 [Neisseria meningitidis 97020]
gi|433527127|ref|ZP_20483744.1| peptide chain release factor 2 [Neisseria meningitidis 69096]
gi|433529245|ref|ZP_20485849.1| peptide chain release factor 2 [Neisseria meningitidis NM3652]
gi|433531411|ref|ZP_20487987.1| peptide chain release factor 2 [Neisseria meningitidis NM3642]
gi|433533454|ref|ZP_20490009.1| peptide chain release factor 2 [Neisseria meningitidis 2007056]
gi|433535633|ref|ZP_20492157.1| peptide chain release factor 2 [Neisseria meningitidis 2001212]
gi|433539958|ref|ZP_20496422.1| peptide chain release factor 2 [Neisseria meningitidis 70030]
gi|433539994|ref|ZP_20496453.1| peptide chain release factor 2 [Neisseria meningitidis 63006]
gi|24638158|sp|Q9JWV4.1|RF2_NEIMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|121051259|emb|CAM07534.1| peptide chain release factor 2 [Neisseria meningitidis Z2491]
gi|319411456|emb|CBY91871.1| peptide chain release factor II (RF-2) [Neisseria meningitidis WUE
2594]
gi|402326723|gb|EJU62122.1| peptide chain release factor 2 [Neisseria meningitidis 69166]
gi|402342911|gb|EJU78067.1| peptide chain release factor 2 [Neisseria meningitidis NM3001]
gi|432206378|gb|ELK62387.1| peptide chain release factor 2 [Neisseria meningitidis 68094]
gi|432207478|gb|ELK63468.1| peptide chain release factor 2 [Neisseria meningitidis 88050]
gi|432213030|gb|ELK68961.1| peptide chain release factor 2 [Neisseria meningitidis 70012]
gi|432213238|gb|ELK69163.1| peptide chain release factor 2 [Neisseria meningitidis 63041]
gi|432251606|gb|ELL06969.1| peptide chain release factor 2 [Neisseria meningitidis 96023]
gi|432255232|gb|ELL10562.1| peptide chain release factor 2 [Neisseria meningitidis 2004090]
gi|432256985|gb|ELL12292.1| peptide chain release factor 2 [Neisseria meningitidis 65014]
gi|432257183|gb|ELL12488.1| peptide chain release factor 2 [Neisseria meningitidis 97020]
gi|432257944|gb|ELL13236.1| peptide chain release factor 2 [Neisseria meningitidis 69096]
gi|432263200|gb|ELL18421.1| peptide chain release factor 2 [Neisseria meningitidis NM3652]
gi|432263632|gb|ELL18846.1| peptide chain release factor 2 [Neisseria meningitidis NM3642]
gi|432264446|gb|ELL19649.1| peptide chain release factor 2 [Neisseria meningitidis 2007056]
gi|432268832|gb|ELL23998.1| peptide chain release factor 2 [Neisseria meningitidis 2001212]
gi|432271003|gb|ELL26136.1| peptide chain release factor 2 [Neisseria meningitidis 70030]
gi|432278250|gb|ELL33292.1| peptide chain release factor 2 [Neisseria meningitidis 63006]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|410463281|ref|ZP_11316810.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409983589|gb|EKO39949.1| peptide chain release factor 2 [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 285
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ +D ++ E D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 126 RRHTSFASVDVYPDAGVDIDI--EVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 183
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ-WDVQV 93
IV++C +S NR+TA ++L A+ +D+++
Sbjct: 184 IVVQCQNEKSQHRNRETAMKVLKARLYDLEL 214
>gi|354613403|ref|ZP_09031324.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
gi|353222233|gb|EHB86550.1| Peptide chain release factor 2 [Saccharomonospora paurometabolica
YIM 90007]
Length = 368
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 46/70 (65%), Gaps = 3/70 (4%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
++D+ ++P EKDI+ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+
Sbjct: 226 EVDHVEIP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGVVVSCQNEKSQLQNK 282
Query: 79 KTARELLVAQ 88
A +L A+
Sbjct: 283 AVAMSVLQAK 292
>gi|385854173|ref|YP_005900687.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
gi|325201177|gb|ADY96632.1| peptide chain release factor 2 [Neisseria meningitidis H44/76]
Length = 341
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 188 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 246
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 247 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 290
>gi|295697362|ref|YP_003590600.1| hypothetical protein [Kyrpidia tusciae DSM 2912]
gi|295412964|gb|ADG07456.1| hypothetical protein Btus_2812 [Kyrpidia tusciae DSM 2912]
Length = 382
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I +D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 213 RRHTSFASVDVLP-ELDESVDVDIRPEDLKIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 271
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR TA ++L A
Sbjct: 272 VVTCQSERSQIKNRATAMKILAA 294
>gi|289450201|ref|YP_003475113.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
gi|289184748|gb|ADC91173.1| peptide chain release factor 2 [Clostridiales genomosp. BVAB3 str.
UPII9-5]
Length = 369
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I+ D++ R SG GGQ V KT + + +THIPTG+
Sbjct: 212 RRHTSFASVEVLP-ELDNSIQININPDDLRIDRYRSSGAGGQHVNKTESAIRITHIPTGV 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR+TA +L
Sbjct: 271 VVSCQTERSQIQNRETAMNML 291
>gi|57241933|ref|ZP_00369873.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
gi|57017125|gb|EAL53906.1| peptide chain release factor 2 [Campylobacter upsaliensis RM3195]
Length = 368
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ +LD +I+EKD++ F R SG GGQ V KT + V +THIPT I
Sbjct: 211 RRHTSF-SSVMVSPELDDDIEIEIEEKDLRIDFYRASGAGGQHVNKTESAVRITHIPTNI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ TA ++L
Sbjct: 270 VVQCQNDRSQHKNKATAFKML 290
>gi|385858094|ref|YP_005904606.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
gi|416189439|ref|ZP_11615352.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
gi|325135363|gb|EGC57984.1| peptide chain release factor 2 [Neisseria meningitidis M0579]
gi|325208983|gb|ADZ04435.1| peptide chain release factor 2 [Neisseria meningitidis NZ-05/33]
Length = 367
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|157738274|ref|YP_001490958.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
gi|315636563|ref|ZP_07891799.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
gi|166977372|sp|A8EWG5.1|RF2_ARCB4 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|157700128|gb|ABV68288.1| peptide chain release factor 2 [Arcobacter butzleri RM4018]
gi|315479212|gb|EFU69909.1| peptide chain release factor RF2 [Arcobacter butzleri JV22]
Length = 365
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S +S + ++D + I++KDI+ R SG GGQ V KT + + +THIPTGI
Sbjct: 211 KRHTSFSSVMVSP-EIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESAIRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ +A ++L
Sbjct: 270 VVQCQNDRSQHKNKDSAFKML 290
>gi|349611133|ref|ZP_08890442.1| peptide chain release factor 2 [Neisseria sp. GT4A_CT1]
gi|348614623|gb|EGY64165.1| peptide chain release factor 2 [Neisseria sp. GT4A_CT1]
Length = 367
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|401411785|ref|XP_003885340.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
gi|325119759|emb|CBZ55312.1| hypothetical protein NCLIV_057350 [Neospora caninum Liverpool]
Length = 427
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 61/114 (53%), Gaps = 18/114 (15%)
Query: 8 LSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIK 67
L +S+L K DL + KID F+R SGPGGQ+V K+ V +TH PTG+ +
Sbjct: 254 LPRSSNLEDKIDLSPPTL-KID-------FMRASGPGGQSVNKSETAVRITHKPTGVSVH 305
Query: 68 CHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKR-RATQEQKKRK 120
C +++S +EN+ A ELL AQ L +R+ E+R RA QK K
Sbjct: 306 CMRTQSQTENKNLALELLRAQL---------LQQMMRKASEERGRAIDAQKGSK 350
>gi|294668116|ref|ZP_06733223.1| peptide chain release factor 2 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291309824|gb|EFE51067.1| peptide chain release factor 2 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 367
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|384156590|ref|YP_005539405.1| peptide chain release factor 2 [Arcobacter butzleri ED-1]
gi|345470144|dbj|BAK71595.1| peptide chain release factor 2 [Arcobacter butzleri ED-1]
Length = 365
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S +S + ++D + I++KDI+ R SG GGQ V KT + + +THIPTGI
Sbjct: 211 KRHTSFSSVMVSP-EIDDNINIVIEDKDIRIDTYRASGAGGQHVNKTESAIRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ +A ++L
Sbjct: 270 VVQCQNDRSQHKNKDSAFKML 290
>gi|261365043|ref|ZP_05977926.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
gi|296313763|ref|ZP_06863704.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
gi|288566638|gb|EFC88198.1| peptide chain release factor 2 [Neisseria mucosa ATCC 25996]
gi|296839690|gb|EFH23628.1| peptide chain release factor 2 [Neisseria polysaccharea ATCC 43768]
Length = 367
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|449136635|ref|ZP_21772010.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
gi|448884728|gb|EMB15205.1| peptide chain release factor 2 [Rhodopirellula europaea 6C]
Length = 337
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 46/70 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
++D S I++KD++E R SG GGQ V KT++ + LTHIPT V++C RS +NR
Sbjct: 183 EIDDSIEVNIEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQHQNR 242
Query: 79 KTARELLVAQ 88
TA ++L A+
Sbjct: 243 DTAWKMLRAK 252
>gi|328948955|ref|YP_004366292.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
gi|328449279|gb|AEB14995.1| hypothetical protein Tresu_2126 [Treponema succinifaciens DSM 2489]
Length = 381
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ LD S ID KD++ R G GGQ V KT + V THIPTGI
Sbjct: 213 RRHTSFAS-VYVFPVLDDSIEVNIDPKDLRVDTYRSGGKGGQHVNKTESAVRFTHIPTGI 271
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS NR +A +L
Sbjct: 272 VVACDSERSQLMNRASAMSIL 292
>gi|239907246|ref|YP_002953987.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
gi|239797112|dbj|BAH76101.1| peptide chain release factor 2 [Desulfovibrio magneticus RS-1]
Length = 285
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ +D ++ E D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 126 RRHTSFASVDVYPDAGVDIDI--EVKEDDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 183
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ-WDVQV 93
IV++C +S NR+TA ++L A+ +D+++
Sbjct: 184 IVVQCQNEKSQHRNRETAMKVLKARLYDLEL 214
>gi|383819873|ref|ZP_09975137.1| peptide chain release factor 1 [Mycobacterium phlei RIVM601174]
gi|383336000|gb|EID14412.1| peptide chain release factor 1 [Mycobacterium phlei RIVM601174]
Length = 355
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 51/91 (56%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 215 QIDENDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 274
Query: 87 AQWDV----QVNGEDSLN--AQIRRIDEKRR 111
A+ Q E S + +QIR +D R
Sbjct: 275 ARLQALAEEQAQAEASADRASQIRTVDRSER 305
>gi|319787302|ref|YP_004146777.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
gi|317465814|gb|ADV27546.1| hypothetical protein Psesu_1704 [Pseudoxanthomonas suwonensis 11-1]
Length = 375
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D +I+ D++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 212 RRHTSF-TSVFVSPEVDDKIDIEINPADLKTDVYRSSGAGGQHVNKTESAVRITHVPSGI 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR A ++L A+
Sbjct: 271 VVACQTERSQHANRDRAMKMLAAK 294
>gi|239618275|ref|YP_002941597.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
gi|259585228|sp|C5CGS4.1|RF2_KOSOT RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|239507106|gb|ACR80593.1| peptide chain release factor 2 [Kosmotoga olearia TBF 19.5.1]
Length = 370
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS S+F + D D I +D++ R G GGQ V +T + V +THIPTG
Sbjct: 209 RRHTSFASVSVFPEMDDDVE--IDIRPEDLKIDTYRAGGAGGQHVNRTESAVRITHIPTG 266
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV+ C RS +N+ TA ++L A+
Sbjct: 267 IVVTCQNERSQHQNKATAMKILKAK 291
>gi|218682869|ref|ZP_03530470.1| peptide chain release factor 2 [Rhizobium etli CIAT 894]
Length = 267
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +TH+PTGI
Sbjct: 101 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHMPTGI 159
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
V++C Q RS +NR A ++L A+ ++ ++ ED+ NA+
Sbjct: 160 VVQCQQERSQHKNRAKAWDMLRARMYEAELKKREDAANAE 199
>gi|384084121|ref|ZP_09995296.1| peptide chain release factor 2 [Acidithiobacillus thiooxidans ATCC
19377]
Length = 293
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V KT++ + +TH+P+GI
Sbjct: 140 RRHTSFAS-VFIYPEIDDSFEIEINPADLKVDTYRASGAGGQHVNKTDSAIRITHVPSGI 198
Query: 65 VIKCHQSRSLSENRKTARELL 85
++ C RS +NR A +L
Sbjct: 199 IVACQTDRSQHKNRAEAMRML 219
>gi|297620931|ref|YP_003709068.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|297376232|gb|ADI38062.1| Peptide chain release factor 1 [Waddlia chondrophila WSU 86-1044]
gi|337293247|emb|CCB91238.1| peptide chain release factor 1 [Waddlia chondrophila 2032/99]
Length = 354
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 40/62 (64%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKD++ R SG GGQ V T++ V LTHIPTGIV C + RS +NR A LL
Sbjct: 215 QIDEKDLRVDTYRASGAGGQHVNTTDSAVRLTHIPTGIVAYCSEERSQHKNRDKAMRLLK 274
Query: 87 AQ 88
A+
Sbjct: 275 AK 276
>gi|317153200|ref|YP_004121248.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
gi|316943451|gb|ADU62502.1| peptide chain release factor 2 [Desulfovibrio aespoeensis Aspo-2]
Length = 391
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D+D ++ ++D++ R SGPGGQ+V KT++ V +TH+PTGI
Sbjct: 231 RRHTSFASVDVYP-DMDDDIEIEVRDEDLRIDVFRSSGPGGQSVNKTSSAVRITHLPTGI 289
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V +C +S N+ TA L+ A+ ++++I+E RR + K
Sbjct: 290 VAQCQNEKSQHRNKATALRLVKARL---------YERELQKIEESRRQDYQAK 333
>gi|83748475|ref|ZP_00945497.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
solanacearum UW551]
gi|207743623|ref|YP_002260015.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum IPO1609]
gi|421888789|ref|ZP_16319870.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum K60-1]
gi|421899276|ref|ZP_16329641.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum MolK2]
gi|83724886|gb|EAP72042.1| Bacterial Peptide Chain Release Factor 2 (RF-2) [Ralstonia
solanacearum UW551]
gi|206590482|emb|CAQ37444.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum MolK2]
gi|206595022|emb|CAQ61949.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum IPO1609]
gi|378965905|emb|CCF96618.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum K60-1]
Length = 300
Score = 62.4 bits (150), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 148 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 207 VQCQNDRSQHRNRAEAMTML 226
>gi|451341196|ref|ZP_21911663.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
gi|449415922|gb|EMD21722.1| Peptide chain release factor 2 [Amycolatopsis azurea DSM 43854]
Length = 370
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I EKDI+ R SGPGGQ+V T++ V +THIPTG+V+ C +S +N+ A ++L A
Sbjct: 235 IPEKDIRVDVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSCQNEKSQLQNKAAAMKVLQA 294
>gi|347761175|ref|YP_004868736.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
gi|347580145|dbj|BAK84366.1| translation peptide chain release factor 2 [Gluconacetobacter
xylinus NBRC 3288]
Length = 322
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-VDDSIEIEINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 215 VVACQTDRSQHRNRATAMTMLKA 237
>gi|255994191|ref|ZP_05427326.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
gi|255993859|gb|EEU03948.1| peptide chain release factor 2 [Eubacterium saphenum ATCC 49989]
Length = 320
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ KV KID+KD++ R SG GGQ V KT++ V + H+PT I
Sbjct: 163 RRHTSFASVDVIP-EIKTDKVIKIDDKDLRIDKFRASGAGGQHVNKTDSAVRIIHLPTKI 221
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS N++ A +L+++
Sbjct: 222 VVTCQNERSQHMNKEAAMHMLISK 245
>gi|407774539|ref|ZP_11121837.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
gi|407282581|gb|EKF08139.1| peptide chain release factor 2 [Thalassospira profundimaris WP0211]
Length = 321
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 1/86 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S SS++ +D +I +KD++ R SG GGQ V +T++ V +THIP
Sbjct: 153 SSARRHTSF-SSVWVYPVIDDDIEIEILDKDLRVDTYRASGAGGQHVNRTDSAVRITHIP 211
Query: 62 TGIVIKCHQSRSLSENRKTARELLVA 87
TGIV +C RS +NR TA ++L A
Sbjct: 212 TGIVAQCQNDRSQHKNRDTAMKMLKA 237
>gi|407642421|ref|YP_006806180.1| peptide chain release factor 1 [Nocardia brasiliensis ATCC 700358]
gi|407305305|gb|AFT99205.1| peptide chain release factor 1 [Nocardia brasiliensis ATCC 700358]
Length = 356
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 59/113 (52%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V LTH+PTGI
Sbjct: 195 RIHTSAAGVLIYPEPDEVEEV-QIDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDV----QVNGEDSLN--AQIRRIDEKRR 111
V+ C RS +N+ A ++L A+ Q + E + +QIR +D R
Sbjct: 254 VVTCQNERSQLQNKARAMQVLAARLQALAEEQADQEAAAGRASQIRTVDRSER 306
>gi|386325949|ref|YP_006022066.1| Peptide chain release factor 1 [Shewanella baltica BA175]
gi|333820094|gb|AEG12760.1| Peptide chain release factor 1 [Shewanella baltica BA175]
Length = 363
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQALEDEKRRSAEESTRRSLVA 301
>gi|93279782|pdb|2FVO|A Chain A, Docking Of The Modified Rf1 X-ray Structure Into The Low
Resolution Cryo-em Map Of E.coli 70s Ribosome Bound With
Rf1
Length = 333
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+EKDI+ R R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 183 LPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQN 242
Query: 78 RKTARELLVA 87
++TA +L A
Sbjct: 243 KQTALRILRA 252
>gi|74316939|ref|YP_314679.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
25259]
gi|74056434|gb|AAZ96874.1| peptide chain release factor 2 [Thiobacillus denitrificans ATCC
25259]
Length = 349
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +THIP+GIV
Sbjct: 197 RHTSFAS-VFVYPEVDDSIEVEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPSGIV 255
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS +NR A +L
Sbjct: 256 VQCQNDRSQHKNRAEAMSML 275
>gi|433448893|ref|ZP_20411758.1| peptide chain release factor 2 [Weissella ceti NC36]
gi|429539282|gb|ELA07319.1| peptide chain release factor 2 [Weissella ceti NC36]
Length = 332
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 172 RRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ Q RS +N+ TA +L A+
Sbjct: 231 VVASQQQRSQFQNKDTAYNMLRAK 254
>gi|325002820|ref|ZP_08123932.1| peptide chain release factor 1 [Pseudonocardia sp. P1]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L D D + +IDEKDI+ R SG GGQ+V T++ V +TH+P+GI
Sbjct: 193 RIHTSAAGVLVFP-DADETPDVEIDEKDIRVDVFRASGHGGQSVNTTDSAVRITHLPSGI 251
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +N+ A ++L A+
Sbjct: 252 VVSCQNERSQLQNKARAMDVLRAR 275
>gi|300704641|ref|YP_003746244.1| peptide chain release factor rf-2; programmed frameshift, partial
[Ralstonia solanacearum CFBP2957]
gi|299072305|emb|CBJ43638.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum CFBP2957]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 148 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 207 VQCQNDRSQHRNRAEAMTML 226
>gi|222056175|ref|YP_002538537.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
gi|221565464|gb|ACM21436.1| hypothetical protein Geob_3093 [Geobacter daltonii FRC-32]
Length = 370
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F +++ KI E D++ R SG GGQ V T++ + +THIPTGI
Sbjct: 210 RRHTSFAS-VFVFPEIEDDIDVKIVETDLRVDTFRSSGAGGQHVNTTDSAIRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS NR TA +L A+
Sbjct: 269 VVACQTERSQHMNRATAMRVLRAK 292
>gi|126172944|ref|YP_001049093.1| peptide chain release factor 1 [Shewanella baltica OS155]
gi|217974700|ref|YP_002359451.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|386339746|ref|YP_006036112.1| Peptide chain release factor 1 [Shewanella baltica OS117]
gi|166223601|sp|A3D0G1.1|RF1_SHEB5 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790896|sp|B8E815.1|RF1_SHEB2 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|125996149|gb|ABN60224.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
baltica OS155]
gi|217499835|gb|ACK48028.1| peptide chain release factor 1 [Shewanella baltica OS223]
gi|334862147|gb|AEH12618.1| Peptide chain release factor 1 [Shewanella baltica OS117]
Length = 363
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQALEDEKRRSAEESTRRSLVA 301
>gi|433514512|ref|ZP_20471294.1| peptide chain release factor 2 [Neisseria meningitidis 63049]
gi|432245474|gb|ELL00944.1| peptide chain release factor 2 [Neisseria meningitidis 63049]
Length = 367
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEILKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|386392849|ref|ZP_10077630.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
gi|385733727|gb|EIG53925.1| peptide chain release factor 2 [Desulfovibrio sp. U5L]
Length = 366
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ LD + E+D++ R SGPGGQ V KT++ + +TH+PT
Sbjct: 211 RRHTSFASVDVYPDAGLDIDI--DVKEEDLRVDVFRASGPGGQHVNKTSSAIRITHLPTN 268
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ-WDVQV 93
IV++C +S NR++A ++L A+ +D+++
Sbjct: 269 IVVQCQNEKSQHRNRESAMKVLKARLYDLEL 299
>gi|242279065|ref|YP_002991194.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
gi|242121959|gb|ACS79655.1| hypothetical protein Desal_1593 [Desulfovibrio salexigens DSM 2638]
Length = 372
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ + D ++ ++DI+ R SGPGGQ V KTN+ V +TH+PT
Sbjct: 212 RRHTSFASVDVYPEISQDIEI--EVKDEDIRLDVFRASGPGGQHVNKTNSAVRITHLPTN 269
Query: 64 IVIKCHQSRSLSENRKTARELL 85
IV++C +S +N++TA ++L
Sbjct: 270 IVVQCQNEKSQLKNKETAMKVL 291
>gi|254386617|ref|ZP_05001914.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
gi|194345459|gb|EDX26425.1| peptide chain release factor 2 [Streptomyces sp. Mg1]
Length = 369
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 56/99 (56%), Gaps = 20/99 (20%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDEGELRIDVYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALK 125
A ++ E+RR ++++ K+DALK
Sbjct: 292 A-----------------KLLERRR---QEEQAKMDALK 310
>gi|15644115|ref|NP_229164.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
gi|418045420|ref|ZP_12683515.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
gi|7388056|sp|Q9X183.1|RF1_THEMA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|52695394|pdb|1RQ0|A Chain A, Crystal Structure Of Peptide Releasing Factor 1
gi|52695395|pdb|1RQ0|B Chain B, Crystal Structure Of Peptide Releasing Factor 1
gi|52695396|pdb|1RQ0|C Chain C, Crystal Structure Of Peptide Releasing Factor 1
gi|4981923|gb|AAD36433.1|AE001790_5 peptide chain release factor RF-1 [Thermotoga maritima MSB8]
gi|351676305|gb|EHA59458.1| peptide chain release factor 1 [Thermotoga maritima MSB8]
Length = 342
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+EKDI+ R R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 183 LPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQN 242
Query: 78 RKTARELLVA 87
++TA +L A
Sbjct: 243 KQTALRILRA 252
>gi|339325257|ref|YP_004684950.1| peptide chain release factor 2 [Cupriavidus necator N-1]
gi|338165414|gb|AEI76469.1| peptide chain release factor 2 [Cupriavidus necator N-1]
Length = 357
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 205 RHTSF-SSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 263
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 264 VQCQNDRSQHRNRAEAMSML 283
>gi|302878965|ref|YP_003847529.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
gi|302581754|gb|ADL55765.1| hypothetical protein Galf_1754 [Gallionella capsiferriformans ES-2]
Length = 367
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +THIPT I
Sbjct: 214 RRHTSF-SSVFVYPEVDDSIEIEINPADLRVDTYRASGAGGQHINKTDSAVRITHIPTNI 272
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS NR A +L
Sbjct: 273 VVQCQSDRSQHRNRAEAMAML 293
>gi|392373755|ref|YP_003205588.1| peptide chain release factor 2 (RF-2) [Candidatus Methylomirabilis
oxyfera]
gi|258591448|emb|CBE67749.1| Peptide chain release factor 2 (RF-2) [Candidatus Methylomirabilis
oxyfera]
Length = 334
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 62/117 (52%), Gaps = 11/117 (9%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + ID+KD++ R SG GGQ V T++ V +TH+PT I
Sbjct: 173 RRHTSFAS-VFVYPEIDETIDVAIDDKDLRIDTYRSSGAGGQHVNVTDSAVRITHLPTNI 231
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 121
V+ C RS +N+ A ++L A+ L RR EK A E +K+ +
Sbjct: 232 VVSCQNERSQHKNKAMAMKVLRAR----------LYDHYRREQEKEMAKLEGEKKDI 278
>gi|114704660|ref|ZP_01437568.1| peptide chain release factor 2 protein [Fulvimarina pelagi
HTCC2506]
gi|114539445|gb|EAU42565.1| peptide chain release factor 2 protein [Fulvimarina pelagi
HTCC2506]
Length = 321
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +D + +++E D++ R SG GGQ V T++ V +THI TGI
Sbjct: 156 RRHTSFASVWVYPV-VDDTIDIEVNESDVRIDTYRASGAGGQHVNTTDSAVRITHIATGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR TA +L A
Sbjct: 215 VVACQQERSQHKNRATAWNMLKA 237
>gi|17545749|ref|NP_519151.1| peptide chain release factor 2 [Ralstonia solanacearum GMI1000]
gi|17428043|emb|CAD14732.1| probable peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum GMI1000]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 148 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 207 VQCQNDRSQHRNRAEAMTML 226
>gi|386334000|ref|YP_006030171.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum Po82]
gi|334196450|gb|AEG69635.1| peptide chain release factor 2 (rf-2) protein [Ralstonia
solanacearum Po82]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 148 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 207 VQCQNDRSQHRNRAEAMTML 226
>gi|408678448|ref|YP_006878275.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
gi|328882777|emb|CCA56016.1| Peptide chain release factor 2 [Streptomyces venezuelae ATCC 10712]
Length = 367
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDE +++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ +A +L
Sbjct: 232 EIDESELRVDVYRASGPGGQGVNTTDSAVRITHLPTGIVVSCQNERSQIQNKASAMNVLQ 291
Query: 87 AQ 88
A+
Sbjct: 292 AK 293
>gi|410663249|ref|YP_006915620.1| peptide chain release factor 2 [Simiduia agarivorans SA1 = DSM
21679]
gi|409025606|gb|AFU97890.1| peptide chain release factor 2 [Simiduia agarivorans SA1 = DSM
21679]
Length = 248
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+F ++D + I+ D++ R SG GGQ V KT++ V LTH+PT
Sbjct: 95 RRHTSF-SSVFVSPEIDDNFEIDINPADVRTDTYRASGAGGQHVNKTDSAVRLTHVPTNT 153
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR A ++L A
Sbjct: 154 VVQCQSERSQHQNRDKAWKMLRA 176
>gi|357384585|ref|YP_004899309.1| peptide chain release factor 2 [Pelagibacterium halotolerans B2]
gi|351593222|gb|AEQ51559.1| peptide chain release factor 2 [Pelagibacterium halotolerans B2]
Length = 320
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S ++E D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 157 RRHTSF-SSVWVYPVIDDSIDIDVNESDVRIDTYRASGAGGQHVNTTDSAVRITHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS +NR A ++L A
Sbjct: 216 VVQCQNERSQHKNRAQAWDMLRA 238
>gi|299066996|emb|CBJ38191.1| peptide chain release factor RF-2; programmed frameshift [Ralstonia
solanacearum CMR15]
Length = 300
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 148 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 206
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 207 VQCQNDRSQHRNRAEAMTML 226
>gi|375093798|ref|ZP_09740063.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
gi|374654531|gb|EHR49364.1| peptide chain release factor 2 [Saccharomonospora marina XMU15]
Length = 384
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ VP EKDI+ R SGPGGQ+V T++ V +TH+PTGIV+ C +S +N+
Sbjct: 244 DHVDVP---EKDIRVDVYRSSGPGGQSVNTTDSAVRITHLPTGIVVSCQNEKSQLQNKAA 300
Query: 81 ARELLVAQ 88
A ++L A+
Sbjct: 301 AMKVLQAK 308
>gi|134097701|ref|YP_001103362.1| peptide chain release factor 2 [Saccharopolyspora erythraea NRRL
2338]
gi|291006339|ref|ZP_06564312.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
gi|166225115|sp|A4F8R2.1|RF2_SACEN RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|133910324|emb|CAM00437.1| putative peptide chain release factor 2 [Saccharopolyspora
erythraea NRRL 2338]
Length = 367
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 42/65 (64%), Gaps = 3/65 (4%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D+ ++P EKDI+ R SGPGGQ+V T++ V +THIPTGIV+ C +S +N+
Sbjct: 228 DHVEIP---EKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAA 284
Query: 81 ARELL 85
A +L
Sbjct: 285 ALRVL 289
>gi|73540774|ref|YP_295294.1| peptide chain release factor 2 [Ralstonia eutropha JMP134]
gi|72118187|gb|AAZ60450.1| bacterial peptide chain release factor 2 (bRF-2) [Ralstonia
eutropha JMP134]
Length = 357
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 205 RHTSF-SSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 263
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 264 VQCQNDRSQHRNRAEAMSML 283
>gi|15888668|ref|NP_354349.1| peptide chain release factor 2 [Agrobacterium fabrum str. C58]
gi|335035016|ref|ZP_08528359.1| peptide chain release factor 2 [Agrobacterium sp. ATCC 31749]
gi|15156400|gb|AAK87134.1| peptide chain release factor 2 [Agrobacterium fabrum str. C58]
gi|333793447|gb|EGL64801.1| peptide chain release factor 2 [Agrobacterium sp. ATCC 31749]
Length = 342
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSIWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ E++ NAQ
Sbjct: 235 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQ 274
>gi|390630292|ref|ZP_10258277.1| Peptide chain release factor 2 [Weissella confusa LBAE C39-2]
gi|390484411|emb|CCF30625.1| Peptide chain release factor 2 [Weissella confusa LBAE C39-2]
Length = 371
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIP
Sbjct: 208 SAGRRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIP 266
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV+ Q RS +N+ TA +L A+
Sbjct: 267 TGIVVASQQQRSQFQNKDTAYAMLRAK 293
>gi|448118553|ref|XP_004203527.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|448120959|ref|XP_004204110.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|359384395|emb|CCE79099.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
gi|359384978|emb|CCE78513.1| Piso0_001138 [Millerozyma farinosa CBS 7064]
Length = 190
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 75/137 (54%), Gaps = 11/137 (8%)
Query: 7 HLSLASSLFRKYDLDY-SKVPK-----IDEKDIQERFVRGS-GPGGQAVAKTNNCVVLTH 59
H +L R Y + +K+P I E++++E F++G GPGGQ + KTN+ V L H
Sbjct: 26 HKALPFFFIRTYGIPKKNKLPPRPLWLIKEEELEEEFIKGGRGPGGQKINKTNSKVQLRH 85
Query: 60 IPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIR----RIDEKRRATQE 115
PT IV+ C SRS +NRK ARE+L + + N E A ++ ++ + +
Sbjct: 86 KPTNIVVTCQYSRSQEQNRKKAREILALKLEELENPEHCRTAVLKERESKVKQNKMKKST 145
Query: 116 QKKRKLDALKKAWKERE 132
+K +K++ ++ KE+E
Sbjct: 146 RKYKKIEEERQLQKEKE 162
>gi|334132944|ref|ZP_08506699.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
gi|333441854|gb|EGK69826.1| Peptide chain release factor 1 [Methyloversatilis universalis FAM5]
Length = 361
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I+ D++ R SG GGQ + KT++ V +THIPTGIV++C RS N+ A +L A
Sbjct: 217 INPADLRIDTFRASGAGGQHINKTDSAVRITHIPTGIVVECQDDRSQHRNKAQAMSVLAA 276
Query: 88 QW-DVQVNGEDSLNAQIRR 105
+ D QV DS A RR
Sbjct: 277 RIRDAQVRARDSQIASTRR 295
>gi|227487967|ref|ZP_03918283.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227542608|ref|ZP_03972657.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
gi|227092058|gb|EEI27370.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51867]
gi|227181806|gb|EEI62778.1| peptide chain release factor 1 [Corynebacterium glucuronolyticum
ATCC 51866]
Length = 358
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEKDI+ R SG GGQ V T++ V LTH+PTGI++ C + RS +N+ A ++L
Sbjct: 217 EIDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGIIVTCQKERSQIQNKARAMQVLQ 276
Query: 87 A 87
A
Sbjct: 277 A 277
>gi|419716581|ref|ZP_14243977.1| peptide chain release factor 1 [Mycobacterium abscessus M94]
gi|382940867|gb|EIC65189.1| peptide chain release factor 1 [Mycobacterium abscessus M94]
Length = 356
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 85
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 86 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 111
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|366053902|ref|ZP_09451624.1| peptide chain release factor 2 [Lactobacillus suebicus KCTC 3549]
Length = 332
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S AS +LD S I + D++ R SG GGQ + KT++ V +THIP
Sbjct: 169 SAGRRHTSFASVDVMP-ELDDSTNVDISDDDLRVDVFRSSGAGGQHINKTSSAVRITHIP 227
Query: 62 TGIVIKCHQSRSLSENRKTARELL 85
TGIV+ RS +NR+TA +L
Sbjct: 228 TGIVVSSQAQRSQLQNRQTAMNML 251
>gi|329897171|ref|ZP_08271911.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
gi|328921326|gb|EGG28720.1| Peptide chain release factor 1 [gamma proteobacterium IMCC3088]
Length = 361
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ DI+ R SG GGQ V KT++ + +TH+PTGIV++C RS +NR A LL
Sbjct: 218 EINKADIRVDTFRASGAGGQHVNKTDSAIRITHLPTGIVVECQDERSQHKNRARAMSLLQ 277
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKL 121
A+ D +EK + Q Q++R L
Sbjct: 278 AKLDTAA-------------EEKAASEQAQERRNL 299
>gi|445461523|ref|ZP_21448782.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
gi|444771247|gb|ELW95378.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC047]
Length = 328
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 175 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 233
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 234 VVACQNQRSQHANRDHA 250
>gi|258405989|ref|YP_003198731.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
gi|257798216|gb|ACV69153.1| hypothetical protein Dret_1869 [Desulfohalobium retbaense DSM 5692]
Length = 371
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D ++ ++++DI+ R SGPGGQ V KT++ + +TH P+GI
Sbjct: 212 RRHTSFASVDVYPEAADDIEI-DVNDEDIRVDVFRSSGPGGQNVNKTSSAIRITHFPSGI 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C +S N++TA ++L
Sbjct: 271 VVQCQNEKSQRRNKETAMKIL 291
>gi|169628533|ref|YP_001702182.1| peptide chain release factor 1 [Mycobacterium abscessus ATCC 19977]
gi|365869421|ref|ZP_09408968.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|397679001|ref|YP_006520536.1| peptide chain release factor 1 [Mycobacterium massiliense str. GO
06]
gi|414582681|ref|ZP_11439821.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1215]
gi|418249122|ref|ZP_12875444.1| peptide chain release factor 1 [Mycobacterium abscessus 47J26]
gi|419711628|ref|ZP_14239091.1| peptide chain release factor 1 [Mycobacterium abscessus M93]
gi|420863399|ref|ZP_15326792.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0303]
gi|420867795|ref|ZP_15331180.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RA]
gi|420872228|ref|ZP_15335608.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RB]
gi|420876605|ref|ZP_15339977.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0304]
gi|420882686|ref|ZP_15346050.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0421]
gi|420888337|ref|ZP_15351691.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0422]
gi|420893220|ref|ZP_15356562.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0708]
gi|420898605|ref|ZP_15361941.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0817]
gi|420903887|ref|ZP_15367208.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1212]
gi|420909011|ref|ZP_15372324.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-R]
gi|420915393|ref|ZP_15378698.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-S]
gi|420919783|ref|ZP_15383081.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-S]
gi|420926281|ref|ZP_15389566.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-1108]
gi|420930586|ref|ZP_15393862.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-151-0930]
gi|420938931|ref|ZP_15402200.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-152-0914]
gi|420940838|ref|ZP_15404100.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-153-0915]
gi|420945879|ref|ZP_15409132.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-154-0310]
gi|420951100|ref|ZP_15414346.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0626]
gi|420955271|ref|ZP_15418510.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0107]
gi|420960789|ref|ZP_15424017.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-1231]
gi|420965749|ref|ZP_15428963.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0810-R]
gi|420970844|ref|ZP_15434041.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0921]
gi|420976627|ref|ZP_15439809.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0212]
gi|420982007|ref|ZP_15445177.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-R]
gi|420986383|ref|ZP_15449544.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0206]
gi|420991239|ref|ZP_15454391.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0307]
gi|420997075|ref|ZP_15460215.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-R]
gi|421001509|ref|ZP_15464639.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-S]
gi|421006595|ref|ZP_15469710.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0119-R]
gi|421011875|ref|ZP_15474968.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-R]
gi|421016793|ref|ZP_15479860.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-S]
gi|421022538|ref|ZP_15485586.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0731]
gi|421028034|ref|ZP_15491071.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-R]
gi|421033742|ref|ZP_15496764.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-S]
gi|421039143|ref|ZP_15502154.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-R]
gi|421042584|ref|ZP_15505589.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-S]
gi|421048281|ref|ZP_15511277.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|238688924|sp|B1MLV1.1|RF1_MYCA9 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|169240500|emb|CAM61528.1| Probable peptide chain release factor 1 (RF-1) [Mycobacterium
abscessus]
gi|353450777|gb|EHB99171.1| peptide chain release factor 1 [Mycobacterium abscessus 47J26]
gi|363998878|gb|EHM20084.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898 = JCM 15300]
gi|382938950|gb|EIC63279.1| peptide chain release factor 1 [Mycobacterium abscessus M93]
gi|392073198|gb|EIT99038.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RA]
gi|392073919|gb|EIT99757.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0303]
gi|392076417|gb|EIU02250.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0726-RB]
gi|392090282|gb|EIU16095.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0304]
gi|392091741|gb|EIU17552.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0421]
gi|392092897|gb|EIU18702.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0422]
gi|392101810|gb|EIU27597.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0708]
gi|392107846|gb|EIU33628.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0817]
gi|392109145|gb|EIU34923.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1212]
gi|392117833|gb|EIU43601.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-1215]
gi|392121385|gb|EIU47150.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-R]
gi|392123077|gb|EIU48839.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0125-S]
gi|392133788|gb|EIU59530.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-S]
gi|392138689|gb|EIU64422.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-1108]
gi|392139604|gb|EIU65336.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-151-0930]
gi|392144446|gb|EIU70171.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-152-0914]
gi|392151625|gb|EIU77333.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-153-0915]
gi|392159087|gb|EIU84783.1| peptide chain release factor 1 [Mycobacterium massiliense
1S-154-0310]
gi|392160877|gb|EIU86568.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0626]
gi|392170886|gb|EIU96563.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0212]
gi|392171816|gb|EIU97489.1| peptide chain release factor 1 [Mycobacterium abscessus 5S-0921]
gi|392174025|gb|EIU99691.1| peptide chain release factor 1 [Mycobacterium abscessus 6G-0728-R]
gi|392187800|gb|EIV13439.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0206]
gi|392189319|gb|EIV14953.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-R]
gi|392190250|gb|EIV15882.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0307]
gi|392200327|gb|EIV25933.1| peptide chain release factor 1 [Mycobacterium massiliense
2B-0912-S]
gi|392202347|gb|EIV27944.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0119-R]
gi|392210279|gb|EIV35849.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-R]
gi|392215235|gb|EIV40783.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0731]
gi|392215893|gb|EIV41440.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0122-S]
gi|392227357|gb|EIV52871.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-R]
gi|392230283|gb|EIV55793.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-S]
gi|392231940|gb|EIV57444.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0930-R]
gi|392241650|gb|EIV67138.1| peptide chain release factor 1 [Mycobacterium abscessus 4S-0116-S]
gi|392242446|gb|EIV67933.1| peptide chain release factor 1 [Mycobacterium massiliense CCUG
48898]
gi|392253854|gb|EIV79321.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-1231]
gi|392255799|gb|EIV81260.1| peptide chain release factor 1 [Mycobacterium massiliense 2B-0107]
gi|392257737|gb|EIV83186.1| peptide chain release factor 1 [Mycobacterium abscessus 3A-0810-R]
gi|395457266|gb|AFN62929.1| Peptide chain release factor 1 [Mycobacterium massiliense str. GO
06]
Length = 356
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 85
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 86 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 111
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|417986507|ref|ZP_12627075.1| peptide chain release factor 1 [Lactobacillus casei 32G]
gi|410525562|gb|EKQ00462.1| peptide chain release factor 1 [Lactobacillus casei 32G]
Length = 359
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IP+GIV+ RS ENR A ++L
Sbjct: 250 IPSGIVVSMQDERSQQENRARAMQIL 275
>gi|116748170|ref|YP_844857.1| peptide chain release factor 2 [Syntrophobacter fumaroxidans MPOB]
gi|116697234|gb|ABK16422.1| bacterial peptide chain release factor 2 (bRF-2) [Syntrophobacter
fumaroxidans MPOB]
Length = 312
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 65/133 (48%), Gaps = 34/133 (25%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ L +P++DEK D++ R SG GGQ V KT++ V
Sbjct: 148 RRHTSFAAVLV---------IPEVDEKIEVEIKQADLRIDTYRASGAGGQHVNKTSSAVR 198
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQ 116
+TH+PTGIV++C +S NR A ++L A R + ++RA QE+
Sbjct: 199 ITHLPTGIVVQCQNEKSQHRNRDIALKILRA----------------RLYEREKRAQQEK 242
Query: 117 KKRKLDALKK-AW 128
+ D+L AW
Sbjct: 243 LQEAHDSLDDIAW 255
>gi|86739504|ref|YP_479904.1| peptide chain release factor 2 [Frankia sp. CcI3]
gi|123751448|sp|Q2JEW7.1|RF2_FRASC RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|86566366|gb|ABD10175.1| bacterial peptide chain release factor 2 (bRF-2) [Frankia sp. CcI3]
Length = 366
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQA 287
Query: 88 Q 88
+
Sbjct: 288 K 288
>gi|21242619|ref|NP_642201.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
str. 306]
gi|21108083|gb|AAM36737.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. citri
str. 306]
Length = 329
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|418007783|ref|ZP_12647657.1| peptide chain release factor 1 [Lactobacillus casei UW4]
gi|410548165|gb|EKQ22380.1| peptide chain release factor 1 [Lactobacillus casei UW4]
Length = 359
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IP+GIV+ RS ENR A ++L
Sbjct: 250 IPSGIVVSMQDERSQQENRARAMQIL 275
>gi|373948210|ref|ZP_09608171.1| Peptide chain release factor 1 [Shewanella baltica OS183]
gi|373884810|gb|EHQ13702.1| Peptide chain release factor 1 [Shewanella baltica OS183]
Length = 363
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 197 RVHTS-AVTVVVLHEVPEAEAISINPADLKVDTFRSSGAGGQHVNKTDSAIRITHIPTGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
V++C RS +NR A +L A+I+ + DEKRR+ +E +R L A
Sbjct: 256 VVECQDQRSQHKNRAQAMSVLA--------------ARIQALEDEKRRSAEETTRRSLVA 301
>gi|340757955|ref|ZP_08694547.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
gi|251836241|gb|EES64778.1| peptide chain release factor 2 [Fusobacterium varium ATCC 27725]
Length = 328
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D S +D D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 172 KRHTSFASVEVMP-EVDESVEVNVDAGDLRIDTYRASGAGGQHVNMTDSAVRITHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C + RS NR+TA ++L
Sbjct: 231 VVTCQRERSQLNNRETAMKML 251
>gi|418522793|ref|ZP_13088824.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
gi|410700783|gb|EKQ59325.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB2388]
Length = 329
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|156086092|ref|XP_001610455.1| hypothetical protein [Babesia bovis T2Bo]
gi|154797708|gb|EDO06887.1| conserved hypothetical protein [Babesia bovis]
Length = 183
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 62/111 (55%), Gaps = 14/111 (12%)
Query: 29 DEKDIQERFVRGSGPGGQAVAKTNNCVVLTH----IPTGIVIKCHQSRSLSENRKTAREL 84
E ++E +++G+GPGGQ V K++NCV L + IV+KCH+ RSL +NR A +
Sbjct: 63 SEYPLREYYIKGTGPGGQKVNKSSNCVQLIRYSPALGVNIVVKCHKHRSLLDNRIEATRI 122
Query: 85 LVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKEREGIE 135
L+ + D ++ AQ R + R +E+ KR++ L A K R+ E
Sbjct: 123 LLRRLD------QAVTAQSRAL----RQAEEKSKRRILKLTAAEKARKKFE 163
>gi|116494651|ref|YP_806385.1| peptide chain release factor 1 [Lactobacillus casei ATCC 334]
gi|191638150|ref|YP_001987316.1| peptide chain release factor 1 [Lactobacillus casei BL23]
gi|227535366|ref|ZP_03965415.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239631748|ref|ZP_04674779.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|301066209|ref|YP_003788232.1| protein chain release factor A [Lactobacillus casei str. Zhang]
gi|385819853|ref|YP_005856240.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei LC2W]
gi|385823050|ref|YP_005859392.1| peptide chain release factor 1 (bRF-1) [Lactobacillus casei BD-II]
gi|409997016|ref|YP_006751417.1| peptide chain release factor 1 [Lactobacillus casei W56]
gi|417980467|ref|ZP_12621147.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|417983234|ref|ZP_12623873.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|417989400|ref|ZP_12629906.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|417992673|ref|ZP_12633026.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|417996010|ref|ZP_12636295.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|418001796|ref|ZP_12641927.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|418004869|ref|ZP_12644875.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|418010581|ref|ZP_12650356.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|418012422|ref|ZP_12652138.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
gi|122263928|sp|Q03A29.1|RF1_LACC3 RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|238693030|sp|B3WDK7.1|RF1_LACCB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|116104801|gb|ABJ69943.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei ATCC 334]
gi|190712452|emb|CAQ66458.1| Peptide chain release factor 1 (RF-1) [Lactobacillus casei BL23]
gi|227186962|gb|EEI67029.1| peptide chain release factor RF1 [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|239526213|gb|EEQ65214.1| peptide chain release factor 1 [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|300438616|gb|ADK18382.1| Protein chain release factor A [Lactobacillus casei str. Zhang]
gi|327382180|gb|AEA53656.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei LC2W]
gi|327385377|gb|AEA56851.1| bacterial peptide chain release factor 1 (bRF-1) [Lactobacillus
casei BD-II]
gi|406358028|emb|CCK22298.1| Peptide chain release factor 1 [Lactobacillus casei W56]
gi|410524790|gb|EKP99697.1| peptide chain release factor 1 [Lactobacillus casei 12A]
gi|410528654|gb|EKQ03502.1| peptide chain release factor 1 [Lactobacillus casei 21/1]
gi|410532874|gb|EKQ07569.1| peptide chain release factor 1 [Lactobacillus casei CRF28]
gi|410536163|gb|EKQ10763.1| peptide chain release factor 1 [Lactobacillus casei M36]
gi|410538489|gb|EKQ13042.1| peptide chain release factor 1 [Lactobacillus casei A2-362]
gi|410545609|gb|EKQ19899.1| peptide chain release factor 1 [Lactobacillus casei UCD174]
gi|410548440|gb|EKQ22641.1| peptide chain release factor 1 [Lactobacillus casei UW1]
gi|410553821|gb|EKQ27814.1| peptide chain release factor 1 [Lactobacillus casei Lc-10]
gi|410556839|gb|EKQ30698.1| peptide chain release factor 1 [Lactobacillus casei Lpc-37]
Length = 359
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IP+GIV+ RS ENR A ++L
Sbjct: 250 IPSGIVVSMQDERSQQENRARAMQIL 275
>gi|417998865|ref|ZP_12639079.1| peptide chain release factor 1 [Lactobacillus casei T71499]
gi|410540195|gb|EKQ14713.1| peptide chain release factor 1 [Lactobacillus casei T71499]
Length = 359
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 2 SIFRRHLSLAS-SLFRKYD-LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTH 59
S R H S A+ + +YD +D KID KDI+ R SG GGQ V KT++ V +TH
Sbjct: 194 SAGRVHTSTATVGVMPEYDEVDL----KIDPKDIRTDVYRSSGAGGQHVNKTSSAVRMTH 249
Query: 60 IPTGIVIKCHQSRSLSENRKTARELL 85
IP+GIV+ RS ENR A ++L
Sbjct: 250 IPSGIVVSMQDERSQQENRARAMQIL 275
>gi|418419676|ref|ZP_12992859.1| peptide chain release factor 1 [Mycobacterium abscessus subsp.
bolletii BD]
gi|364001306|gb|EHM22502.1| peptide chain release factor 1 [Mycobacterium abscessus subsp.
bolletii BD]
Length = 356
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 85
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 216 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARAMQVLA 275
Query: 86 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 111
+A+ Q + +QIR +D R
Sbjct: 276 ARLQALAEEQAQADASAGRASQIRTVDRSER 306
>gi|404378910|ref|ZP_10983986.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
gi|294483256|gb|EFG30942.1| peptide chain release factor 2 [Simonsiella muelleri ATCC 29453]
Length = 367
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 63/113 (55%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSFAS-VFVYPEVDDSIEIDINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLRSKL---------FELEMRKRNEEKQALEEGK 316
>gi|291544247|emb|CBL17356.1| bacterial peptide chain release factor 2 (bRF-2) [Ruminococcus
champanellensis 18P13]
Length = 375
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ L ++D S I +D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 212 RRHTSFAA-LEVMPEIDDSMEVDIRLEDVKMDVFRSSGAGGQHINKTSSAVRLTHIPTGI 270
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR A ++L
Sbjct: 271 VVSCQTQRSQFQNRDFAMKML 291
>gi|148270549|ref|YP_001245009.1| peptide chain release factor 1 [Thermotoga petrophila RKU-1]
gi|147736093|gb|ABQ47433.1| bacterial peptide chain release factor 1 (bRF-1) [Thermotoga
petrophila RKU-1]
Length = 342
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+EKDI+ R R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 183 LPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQN 242
Query: 78 RKTARELLVA 87
++TA +L A
Sbjct: 243 KQTALRILRA 252
>gi|39995653|ref|NP_951604.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens PCA]
gi|409911111|ref|YP_006889576.1| peptidyl-tRNA hydrolase-like protein [Geobacter sulfurreducens
KN400]
gi|39982416|gb|AAR33877.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
PCA]
gi|298504676|gb|ADI83399.1| peptidyl-tRNA hydrolase-related protein [Geobacter sulfurreducens
KN400]
Length = 126
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 45/76 (59%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+ E D++E FVR SG GGQ V KT CV + H PTGI +KC + RS S NR AR ++
Sbjct: 25 VSEADLEETFVRSSGAGGQHVNKTATCVQIRHRPTGIEVKCMKDRSQSVNRFLARREILE 84
Query: 88 QWDVQVNGEDSLNAQI 103
+ + GE + ++
Sbjct: 85 RIERLNKGESPRDVRV 100
>gi|350560872|ref|ZP_08929711.1| peptide chain release factor 2 [Thioalkalivibrio thiocyanoxidans
ARh 4]
gi|349780979|gb|EGZ35287.1| peptide chain release factor 2 [Thioalkalivibrio thiocyanoxidans
ARh 4]
Length = 329
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ +F ++D S +I+ D++ R SG GGQ V +T + + +TH+P+GI
Sbjct: 176 RRHTSFAA-VFVSPEIDDSIEIEINPADLKVDTYRASGAGGQHVNRTESAIRITHMPSGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA + L A+
Sbjct: 235 VVACQNDRSQHKNRDTAMKQLKAK 258
>gi|78047471|ref|YP_363646.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
gi|123585257|sp|Q3BUB7.1|RF2_XANC5 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|78035901|emb|CAJ23592.1| peptide chain release factor 2 [Xanthomonas campestris pv.
vesicatoria str. 85-10]
Length = 374
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 271 VVACQTGRSQHQNRDNAMKMLAAK 294
>gi|403253693|ref|ZP_10919994.1| peptide chain release factor 1 [Thermotoga sp. EMP]
gi|402811227|gb|EJX25715.1| peptide chain release factor 1 [Thermotoga sp. EMP]
Length = 342
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+EKDI+ R R SG GGQ V KT + V +TH+PTGIV+ C RS +N
Sbjct: 183 LPEIEEKDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHLPTGIVVSCQNERSQYQN 242
Query: 78 RKTARELLVA 87
++TA +L A
Sbjct: 243 KQTALRILRA 252
>gi|404393934|ref|ZP_10985738.1| peptide chain release factor 2 [Ralstonia sp. 5_2_56FAA]
gi|348615744|gb|EGY65255.1| peptide chain release factor 2 [Ralstonia sp. 5_2_56FAA]
Length = 310
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +THIPTGIV
Sbjct: 158 RHTSF-SSIFVYPEVDDSIEIEVNPADLRVDTYRASGAGGQHINKTDSAVRITHIPTGIV 216
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 217 VQCQNDRSQHRNRAEAMTML 236
>gi|319638812|ref|ZP_07993570.1| peptide chain release factor 2 [Neisseria mucosa C102]
gi|317399716|gb|EFV80379.1| peptide chain release factor 2 [Neisseria mucosa C102]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS N+ A E+L
Sbjct: 273 VVQCQNDRSQHANKAAAMEML 293
>gi|293610588|ref|ZP_06692888.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292826932|gb|EFF85297.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 337
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 184 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 242
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 243 VVACQNQRSQHANRDHA 259
>gi|390992975|ref|ZP_10263181.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
gi|372552290|emb|CCF70156.1| peptide chain release factor 2 [Xanthomonas axonopodis pv. punicae
str. LMG 859]
Length = 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|87120696|ref|ZP_01076589.1| peptide chain release factor 2, programmed frameshift [Marinomonas
sp. MED121]
gi|86163924|gb|EAQ65196.1| peptide chain release factor 2, programmed frameshift [Marinomonas
sp. MED121]
Length = 293
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + I+ D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 140 RRHTSFAS-VFLSPEIDDNVEIDINPADLRTDTYRSSGAGGQHVNTTDSAVRITHIPTGI 198
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS NR A + L A+
Sbjct: 199 VVQCQNQRSQHANRDFAMKQLRAK 222
>gi|399923642|ref|ZP_10781000.1| hypothetical protein Prhi1_00305 [Peptoniphilus rhinitidis 1-13]
Length = 371
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S +S +F + D D +I E++++ R SG GGQ V T++ V +THIPTG
Sbjct: 213 RRHTSFSSVDVFPELDDDTD--VEIKEEELKIDTYRSSGAGGQHVNTTDSAVRITHIPTG 270
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV++C RS +NR+ A +L A+
Sbjct: 271 IVVQCQNERSQIQNREKAMNMLKAK 295
>gi|381171598|ref|ZP_09880741.1| peptide chain release factor 2 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
gi|380687971|emb|CCG37228.1| peptide chain release factor 2 [Xanthomonas citri pv.
mangiferaeindicae LMG 941]
Length = 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|418937449|ref|ZP_13491087.1| peptide chain release factor 2 [Rhizobium sp. PDO1-076]
gi|375055842|gb|EHS52064.1| peptide chain release factor 2 [Rhizobium sp. PDO1-076]
Length = 341
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 176 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q RS +N+ A ++L A
Sbjct: 235 VVQCQQERSQHKNKAKAWDMLRA 257
>gi|261855042|ref|YP_003262325.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
gi|261835511|gb|ACX95278.1| hypothetical protein Hneap_0421 [Halothiobacillus neapolitanus c2]
Length = 365
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D + +++ D++ R SG GGQ V +T + V TH+PTG+
Sbjct: 212 RRHTSFAS-VFVSPEVDDNIEIEVNPADLRVDVFRASGAGGQHVNRTESAVRFTHLPTGV 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR+ A ++L A+
Sbjct: 271 VVACQAERSQIQNRERAMKMLKAK 294
>gi|254191408|ref|ZP_04897912.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
52237]
gi|157939080|gb|EDO94750.1| peptide chain release factor 2 [Burkholderia pseudomallei Pasteur
52237]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|425735918|ref|ZP_18854229.1| peptide chain release factor 2 [Brevibacterium casei S18]
gi|425479152|gb|EKU46332.1| peptide chain release factor 2 [Brevibacterium casei S18]
Length = 372
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 55/105 (52%), Gaps = 16/105 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
++DE D++ R SGPGGQ+V T++ V +THIPTG+V+ +S +NR+ A +L
Sbjct: 232 EVDENDLRIDVYRSSGPGGQSVNTTDSAVRITHIPTGVVVSMQNEKSQIQNREAAMRVL- 290
Query: 87 AQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLDALKKAWKER 131
Q R ++ KR+ QKK +K +W ++
Sbjct: 291 ---------------QSRLLERKRQEEAAQKKELAGDIKASWGDQ 320
>gi|418517897|ref|ZP_13084053.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
gi|410705368|gb|EKQ63842.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
malvacearum str. GSPB1386]
Length = 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|348170778|ref|ZP_08877672.1| putative peptide chain release factor 2 [Saccharopolyspora spinosa
NRRL 18395]
Length = 368
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 38/58 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
I EKDI+ R SGPGGQ+V T++ V +THIPTGIV+ C +S +N+ A +L
Sbjct: 232 IPEKDIRVDVFRSSGPGGQSVNTTDSAVRITHIPTGIVVSCQNEKSQLQNKAAAMRVL 289
>gi|325925182|ref|ZP_08186595.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
perforans 91-118]
gi|346724799|ref|YP_004851468.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
citrumelo F1]
gi|325544436|gb|EGD15806.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
perforans 91-118]
gi|346649546|gb|AEO42170.1| peptide chain release factor 2 [Xanthomonas axonopodis pv.
citrumelo F1]
Length = 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|297171212|gb|ADI22220.1| protein chain release factor B [uncultured Gemmatimonadales
bacterium HF0200_34B24]
gi|297171327|gb|ADI22332.1| protein chain release factor B [uncultured actinobacterium
HF0500_01C15]
Length = 325
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S D +V +I+E D++ R SG GGQ V KT++ V +TH PT I
Sbjct: 172 RRHTSFTSVFVYPLVEDDIEV-EINEADLRIDTYRASGAGGQHVNKTDSAVRITHEPTNI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C Q RS +NR TA ++L A
Sbjct: 231 VVSCQQERSQHKNRSTAMKMLRA 253
>gi|154253713|ref|YP_001414537.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
gi|154157663|gb|ABS64880.1| peptide chain release factor 2 [Parvibaculum lavamentivorans DS-1]
Length = 322
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S SS++ +D ++ E D++ R SG GGQ V T++ V +THIP
Sbjct: 154 SAARRHTSF-SSVWVYPVVDDKIDIEVSEADVRIDTYRSSGAGGQHVNTTDSAVRITHIP 212
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV+ C RS +NR TA ++L A+
Sbjct: 213 TGIVVACQNERSQHKNRATAWDMLRAR 239
>gi|53719890|ref|YP_108876.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
gi|53723794|ref|YP_103319.1| peptide chain release factor 2 [Burkholderia mallei ATCC 23344]
gi|226830773|ref|YP_001066897.2| peptide chain release factor 2 [Burkholderia pseudomallei 1106a]
gi|254200276|ref|ZP_04906642.1| peptide chain release factor 2 [Burkholderia mallei FMH]
gi|254209352|ref|ZP_04915698.1| peptide chain release factor 2 [Burkholderia mallei JHU]
gi|81604734|sp|Q62J00.1|RF2_BURMA RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|81607820|sp|Q63SP0.1|RF2_BURPS RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|229576668|sp|A3NX26.3|RF2_BURP0 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|52210304|emb|CAH36283.1| peptide chain release factor 2 [Burkholderia pseudomallei K96243]
gi|52427217|gb|AAU47810.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei ATCC 23344]
gi|147749872|gb|EDK56946.1| peptide chain release factor 2 [Burkholderia mallei FMH]
gi|147750125|gb|EDK57196.1| peptide chain release factor 2 [Burkholderia mallei JHU]
gi|213385360|gb|ABN92528.3| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106a]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|241895046|ref|ZP_04782342.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
33313]
gi|241871764|gb|EER75515.1| peptide chain release factor 2 [Weissella paramesenteroides ATCC
33313]
Length = 396
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 236 RRHTSFVS-IDVMPELDDSVEVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIPTGI 294
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ Q RS +N+ TA +L A+
Sbjct: 295 VVASQQQRSQFQNKDTAYAMLRAK 318
>gi|27262208|gb|AAN87385.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
gi|111074980|gb|ABH04839.1| bacterial peptide chain release factor 2 [Heliobacillus mobilis]
Length = 341
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D + +I+ +D++ R SG GGQ V KT + V +THIPTGI
Sbjct: 186 RRHTSFASVEVLPEVSDDIDI-QINSEDLKVDTFRASGAGGQHVNKTESAVRITHIPTGI 244
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA +L A+
Sbjct: 245 VVACQSERSQIQNRATAMRMLQAK 268
>gi|332638053|ref|ZP_08416916.1| peptide chain release factor 2 [Weissella cibaria KACC 11862]
Length = 332
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S S + +LD S I+ D++ R SG GGQ + KT++ V LTHIP
Sbjct: 169 SAGRRHTSFVS-IDVMPELDDSVDVDINPADVKMDVYRASGAGGQHINKTSSAVRLTHIP 227
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV+ Q RS +N+ TA +L A+
Sbjct: 228 TGIVVASQQQRSQFQNKDTAYAMLRAK 254
>gi|58696790|ref|ZP_00372322.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|58698424|ref|ZP_00373334.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58698511|ref|ZP_00373415.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|225630212|ref|YP_002727003.1| Protein chain release factor B [Wolbachia sp. wRi]
gi|58534979|gb|EAL59074.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58535047|gb|EAL59136.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila ananassae]
gi|58537012|gb|EAL60158.1| peptide chain release factor 2 [Wolbachia endosymbiont of
Drosophila simulans]
gi|225592193|gb|ACN95212.1| Protein chain release factor B [Wolbachia sp. wRi]
Length = 336
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPTG+
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIA-VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGV 240
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS N+ A +LL
Sbjct: 241 VVQCQNGRSQHRNKDEALKLL 261
>gi|325916711|ref|ZP_08178968.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
vesicatoria ATCC 35937]
gi|325537060|gb|EGD08799.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
vesicatoria ATCC 35937]
Length = 329
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|167646537|ref|YP_001684200.1| peptide chain release factor 2 [Caulobacter sp. K31]
gi|189039999|sp|B0SXB7.1|RF2_CAUSK RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|167348967|gb|ABZ71702.1| peptide chain release factor 2 [Caulobacter sp. K31]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 62/113 (54%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS+ D ++ I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 207 KRHTSFASAWVYPVVDDTIEI-DINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 265
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
+ C RS +NR+ A ++L A+ A+++R + ++A ++QK
Sbjct: 266 AVACQAGRSQHQNREEAWKMLRAR---------LYEAELQRREAAQQALEDQK 309
>gi|99035041|ref|ZP_01314835.1| hypothetical protein Wendoof_01000330 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 336
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS D + +DEKD++ R SG GGQ V KT + V +THIPTG+
Sbjct: 182 KRHTSFASVGVTPVIEDSIDIA-VDEKDLKIDTYRASGAGGQHVNKTESAVRITHIPTGV 240
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS N+ A +LL
Sbjct: 241 VVQCQNGRSQHRNKDEALKLL 261
>gi|91792280|ref|YP_561931.1| peptide chain release factor 1 [Shewanella denitrificans OS217]
gi|119361603|sp|Q12QR8.1|RF1_SHEDO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|91714282|gb|ABE54208.1| bacterial peptide chain release factor 1 (bRF-1) [Shewanella
denitrificans OS217]
Length = 361
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 65/120 (54%), Gaps = 16/120 (13%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A ++ +++ ++ I+ D++ R SG GGQ V KT++ + +THIP+GI
Sbjct: 197 RVHTS-ACTVVVLHEVPEAEAISINPADLKVDTFRASGAGGQHVNKTDSAIRITHIPSGI 255
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKLDA 123
+++C RS +NR A +L A+I+ I DEKRR+ +E +R L A
Sbjct: 256 IVECQDQRSQHKNRAQAMSVLA--------------ARIQAIEDEKRRSAEETTRRSLVA 301
>gi|339022504|ref|ZP_08646441.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
gi|338750491|dbj|GAA09745.1| translation peptide chain release factor 2 (RF-2) [Acetobacter
tropicalis NBRC 101654]
Length = 322
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S ++++ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-IDDSIEIEVNDSDLKVDTFRASGAGGQHVNKTDSAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA ++L A
Sbjct: 215 VVACQTDRSQHRNRATAMQMLRA 237
>gi|83858490|ref|ZP_00952012.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
gi|83853313|gb|EAP91165.1| peptide chain release factor 2 [Oceanicaulis sp. HTCC2633]
Length = 316
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ +D + +I++KD++ R SG GGQ + KT++ V LTH PTGI
Sbjct: 156 RRHTSFAS-VWTYPLVDDTIEIEIEDKDVRVDTYRASGAGGQHINKTDSAVRLTHEPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR A +L A
Sbjct: 215 VVACQTDRSQHKNRANAWTMLRA 237
>gi|254557155|ref|YP_003063572.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300766721|ref|ZP_07076638.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181160|ref|YP_003925288.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|380033087|ref|YP_004890078.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|418275886|ref|ZP_12891209.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448821870|ref|YP_007415032.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
gi|32171522|sp|Q88UT2.1|RF1_LACPL RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254046082|gb|ACT62875.1| peptide chain release factor 1 [Lactobacillus plantarum JDM1]
gi|300495821|gb|EFK30972.1| peptide chain release factor RF1 [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046651|gb|ADN99194.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|342242330|emb|CCC79564.1| peptide chain release factor 1 [Lactobacillus plantarum WCFS1]
gi|376009437|gb|EHS82766.1| peptide chain release factor 1 [Lactobacillus plantarum subsp.
plantarum NC8]
gi|448275367|gb|AGE39886.1| Peptide chain release factor 1 [Lactobacillus plantarum ZJ316]
Length = 360
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 39/60 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
ID+KDI+ R SG GGQ + KT++ V +TH+PTGIV+ RS +NR A E+L A
Sbjct: 218 IDQKDIRTDVFRSSGAGGQHINKTSSAVRMTHLPTGIVVSMQDQRSQQQNRAKAMEILRA 277
>gi|374851785|dbj|BAL54735.1| peptide chain release factor RF-2 [uncultured beta proteobacterium]
Length = 293
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D +I+ D++ R SG GGQ V +T++ V +THIPTGI
Sbjct: 129 RRHTSFAS-VFVYPEIDDKIEVEINPADLRIDTYRASGAGGQHVNRTDSAVRITHIPTGI 187
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ A +L
Sbjct: 188 VVQCQNDRSQHKNKAAAMAML 208
>gi|294624919|ref|ZP_06703574.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|294666711|ref|ZP_06731947.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
gi|292600798|gb|EFF44880.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 11122]
gi|292603536|gb|EFF46951.1| peptide chain release factor 2 [Xanthomonas fuscans subsp.
aurantifolii str. ICPB 10535]
Length = 313
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 151 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 209
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 210 VVACQTGRSQHQNRDNAMKMLAAK 233
>gi|222100202|ref|YP_002534770.1| peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
gi|221572592|gb|ACM23404.1| Peptide chain release factor 1 [Thermotoga neapolitana DSM 4359]
Length = 349
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 7/70 (10%)
Query: 25 VPKIDEKDIQER-------FVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSEN 77
+P+I+E+DI+ R R SG GGQ V KT + V +THIPTGIV+ C RS +N
Sbjct: 190 LPEIEERDIEIRPEDLKIETFRASGHGGQYVNKTESAVRITHIPTGIVVSCQNERSQYQN 249
Query: 78 RKTARELLVA 87
++TA +L A
Sbjct: 250 KQTALRILRA 259
>gi|404492859|ref|YP_006716965.1| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
gi|404397961|gb|ABA88496.2| peptide chain release factor 2 [Pelobacter carbinolicus DSM 2380]
Length = 364
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S +F +L I+EKD++ R SG GGQ V KT++ + +TH+P+GI
Sbjct: 210 RRHTSFCS-VFVFPELPDDVEVDINEKDLKVDTYRSSGAGGQHVNKTDSAIRITHVPSGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA + L A+
Sbjct: 269 VVACQNERSQHKNRATAMKQLKAR 292
>gi|392944575|ref|ZP_10310217.1| peptide chain release factor 2 [Frankia sp. QA3]
gi|392287869|gb|EIV93893.1| peptide chain release factor 2 [Frankia sp. QA3]
Length = 366
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
ID+KD++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDDKDLRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMIVLQA 287
Query: 88 Q 88
+
Sbjct: 288 K 288
>gi|291276501|ref|YP_003516273.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
gi|290963695|emb|CBG39527.1| peptide chain release factor 2 [Helicobacter mustelae 12198]
Length = 365
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 50/81 (61%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS +LD + I+EKD++ R SG GGQ + KT + + +TH+PTGI
Sbjct: 209 KRHTSFASVQVSP-ELDDNIEIDIEEKDLRIDTYRASGAGGQHINKTESAIRITHLPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +N+ +A ++L
Sbjct: 268 VVQCQNDRSQHKNKASALKML 288
>gi|206560551|ref|YP_002231316.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
gi|238693117|sp|B4EDB1.1|RF2_BURCJ RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|198036593|emb|CAR52490.1| peptide chain release factor 2 [Burkholderia cenocepacia J2315]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|340361061|ref|ZP_08683502.1| peptide chain release factor RF2 [Neisseria macacae ATCC 33926]
gi|339889070|gb|EGQ78474.1| peptide chain release factor RF2 [Neisseria macacae ATCC 33926]
Length = 377
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 10/113 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH PTGI
Sbjct: 214 KRHTSF-SSVFVYPEIDDSIEIEINPADLRIDTYRASGAGGQHINKTDSAVRITHEPTGI 272
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQK 117
V++C RS N+ A E+L ++ ++R+ +E+++A +E K
Sbjct: 273 VVQCQNDRSQHANKAAAMEMLKSKL---------YELEMRKRNEEKQALEEGK 316
>gi|424910200|ref|ZP_18333577.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
USDA 2370]
gi|392846231|gb|EJA98753.1| peptide chain release factor 2 [Rhizobium leguminosarum bv. viciae
USDA 2370]
Length = 376
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 210 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 268
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ E++ NAQ
Sbjct: 269 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQ 308
>gi|254261824|ref|ZP_04952878.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1710a]
gi|254220513|gb|EET09897.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1710a]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|255725070|ref|XP_002547464.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240135355|gb|EER34909.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 172
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 37/62 (59%)
Query: 40 GSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSL 99
G GPGGQ + K N+ V L HIPTGIVI C +RS +NR ARE L + D N S
Sbjct: 49 GRGPGGQKINKCNSKVQLKHIPTGIVIDCQATRSKEQNRAIAREKLALKLDDYYNPGTSR 108
Query: 100 NA 101
N+
Sbjct: 109 NS 110
>gi|217420389|ref|ZP_03451894.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 576]
gi|226195477|ref|ZP_03791065.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei Pakistan 9]
gi|237813009|ref|YP_002897460.1| peptide chain release factor 2 [Burkholderia pseudomallei MSHR346]
gi|238561621|ref|ZP_00441741.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei GB8 horse 4]
gi|242317384|ref|ZP_04816400.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106b]
gi|251767233|ref|ZP_04820018.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei PRL-20]
gi|284159918|ref|YP_001059616.2| peptide chain release factor 2 [Burkholderia pseudomallei 668]
gi|217395801|gb|EEC35818.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 576]
gi|225932437|gb|EEH28436.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei Pakistan 9]
gi|237504244|gb|ACQ96562.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei MSHR346]
gi|238524226|gb|EEP87660.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei GB8 horse 4]
gi|242140623|gb|EES27025.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1106b]
gi|243063468|gb|EES45654.1| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei PRL-20]
gi|261825971|gb|ABN00993.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei NCTC 10229]
gi|261835054|gb|ABO05438.2| peptide chain release factor 2, programmed frameshift [Burkholderia
mallei NCTC 10247]
gi|283775112|gb|ABN84239.2| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 668]
Length = 367
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|384427751|ref|YP_005637110.1| peptide chain release factor 2 [Xanthomonas campestris pv. raphani
756C]
gi|341936853|gb|AEL06992.1| peptide chain release factor 2 [Xanthomonas campestris pv. raphani
756C]
Length = 360
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 198 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 256
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 257 VVACQTGRSQHQNRDNAMKMLAAK 280
>gi|374587364|ref|ZP_09660456.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
gi|373876225|gb|EHQ08219.1| bacterial peptide chain release factor 1 (bRF-1) [Leptonema illini
DSM 21528]
Length = 364
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL 85
++DEKD++ R SG GGQ V KT + V LTHIPTG+V+ C RS +NR A ++L
Sbjct: 218 ELDEKDLRVDVYRASGAGGQHVNKTESAVRLTHIPTGLVVTCQDERSQHKNRAKAMKVL 276
>gi|325190234|emb|CCA24711.1| peptide chain release factor putative [Albugo laibachii Nc14]
Length = 372
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 53/91 (58%), Gaps = 5/91 (5%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPK---IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S A R Y ++ ++ + KD++ R +GPGGQ V T++ V +TH+P
Sbjct: 254 RRHTSFAQ--VRVYPIEAAEATTRTAVSGKDLRIDTFRATGPGGQHVNSTDSAVRITHLP 311
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQWDVQ 92
+GIV++C RS N+ A E+L+A+ + Q
Sbjct: 312 SGIVVQCQSERSQHRNKAQAMEVLLAKLNNQ 342
>gi|58582496|ref|YP_201512.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84624384|ref|YP_451756.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188575993|ref|YP_001912922.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
PXO99A]
gi|58427090|gb|AAW76127.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae KACC
10331]
gi|84368324|dbj|BAE69482.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|188520445|gb|ACD58390.1| peptide chain release factor 2 [Xanthomonas oryzae pv. oryzae
PXO99A]
Length = 329
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|384419206|ref|YP_005628566.1| peptide chain release factor 2, programmed frameshift [Xanthomonas
oryzae pv. oryzicola BLS256]
gi|353462119|gb|AEQ96398.1| peptide chain release factor 2, programmed frameshift [Xanthomonas
oryzae pv. oryzicola BLS256]
Length = 374
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 271 VVACQTGRSQHQNRDNAMKMLAAK 294
>gi|298528152|ref|ZP_07015556.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
thiodismutans ASO3-1]
gi|298511804|gb|EFI35706.1| hypothetical protein Dthio_PD3135 [Desulfonatronospira
thiodismutans ASO3-1]
Length = 368
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS ++ + D + ++ E+D++ + SGPGGQ V KT++ + +TH+PTG
Sbjct: 213 RRHTSFASVDVYPQVSDDIN--IEVKEEDMRVDVFKASGPGGQHVNKTSSAIRITHMPTG 270
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV++C RS NR A ++L A+
Sbjct: 271 IVVQCQSERSQRRNRDAALKILKAK 295
>gi|169794367|ref|YP_001712160.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
gi|184159830|ref|YP_001848169.1| protein chain release factor B [Acinetobacter baumannii ACICU]
gi|213159055|ref|YP_002321053.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
gi|215481924|ref|YP_002324106.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
gi|239503845|ref|ZP_04663155.1| peptide chain release factor 2 [Acinetobacter baumannii AB900]
gi|260557921|ref|ZP_05830134.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|332854818|ref|ZP_08435581.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
gi|332868948|ref|ZP_08438507.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
gi|332872826|ref|ZP_08440791.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
gi|384133522|ref|YP_005516134.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
gi|384144951|ref|YP_005527661.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-ZJ06]
gi|385239256|ref|YP_005800595.1| protein chain release factor B [Acinetobacter baumannii
TCDC-AB0715]
gi|387122251|ref|YP_006288133.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-TJ]
gi|403673338|ref|ZP_10935639.1| peptide chain release factor 2 [Acinetobacter sp. NCTC 10304]
gi|407930737|ref|YP_006846380.1| peptide chain release factor 2 [Acinetobacter baumannii TYTH-1]
gi|416147598|ref|ZP_11601906.1| protein chain release factor B [Acinetobacter baumannii AB210]
gi|417546134|ref|ZP_12197220.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC032]
gi|417555593|ref|ZP_12206662.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-81]
gi|417562196|ref|ZP_12213075.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC137]
gi|417565700|ref|ZP_12216574.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC143]
gi|417571032|ref|ZP_12221889.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC189]
gi|417575100|ref|ZP_12225953.1| peptide chain release factor 2 [Acinetobacter baumannii Canada
BC-5]
gi|417577540|ref|ZP_12228385.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-17]
gi|417870802|ref|ZP_12515752.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH1]
gi|417875352|ref|ZP_12520170.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH2]
gi|417880345|ref|ZP_12524876.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH3]
gi|417883372|ref|ZP_12527619.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH4]
gi|421199654|ref|ZP_15656815.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC109]
gi|421202950|ref|ZP_15660094.1| peptide chain release factor 2 [Acinetobacter baumannii AC12]
gi|421455580|ref|ZP_15904924.1| peptide chain release factor 2 [Acinetobacter baumannii IS-123]
gi|421533389|ref|ZP_15979674.1| peptide chain release factor 2 [Acinetobacter baumannii AC30]
gi|421620857|ref|ZP_16061785.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC074]
gi|421624181|ref|ZP_16065054.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC098]
gi|421627847|ref|ZP_16068644.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC180]
gi|421635323|ref|ZP_16075926.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-13]
gi|421641896|ref|ZP_16082427.1| peptide chain release factor 2 [Acinetobacter baumannii IS-235]
gi|421647811|ref|ZP_16088222.1| peptide chain release factor 2 [Acinetobacter baumannii IS-251]
gi|421650431|ref|ZP_16090808.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC0162]
gi|421654733|ref|ZP_16095060.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-72]
gi|421661054|ref|ZP_16101235.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-83]
gi|421662907|ref|ZP_16103061.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC110]
gi|421668323|ref|ZP_16108363.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC087]
gi|421670137|ref|ZP_16110146.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC099]
gi|421673544|ref|ZP_16113481.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC065]
gi|421680027|ref|ZP_16119890.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC111]
gi|421688727|ref|ZP_16128425.1| peptide chain release factor 2 [Acinetobacter baumannii IS-143]
gi|421690142|ref|ZP_16129813.1| peptide chain release factor 2 [Acinetobacter baumannii IS-116]
gi|421693578|ref|ZP_16133211.1| peptide chain release factor 2 [Acinetobacter baumannii WC-692]
gi|421698204|ref|ZP_16137746.1| peptide chain release factor 2 [Acinetobacter baumannii IS-58]
gi|421705095|ref|ZP_16144536.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1122]
gi|421708874|ref|ZP_16148247.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1219]
gi|421789880|ref|ZP_16226124.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-82]
gi|421790676|ref|ZP_16226875.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-2]
gi|421795108|ref|ZP_16231193.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-21]
gi|421799333|ref|ZP_16235326.1| peptide chain release factor 2 [Acinetobacter baumannii Canada BC1]
gi|421803995|ref|ZP_16239907.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-694]
gi|421807395|ref|ZP_16243256.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC035]
gi|424050619|ref|ZP_17788155.1| peptide chain release factor 2 [Acinetobacter baumannii Ab11111]
gi|424058316|ref|ZP_17795813.1| peptide chain release factor 2 [Acinetobacter baumannii Ab33333]
gi|424061791|ref|ZP_17799278.1| peptide chain release factor 2 [Acinetobacter baumannii Ab44444]
gi|425748146|ref|ZP_18866134.1| peptide chain release factor 2 [Acinetobacter baumannii WC-348]
gi|425754104|ref|ZP_18871971.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-113]
gi|445410551|ref|ZP_21432867.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-57]
gi|445450928|ref|ZP_21444622.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-92]
gi|445470724|ref|ZP_21451656.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC338]
gi|445484703|ref|ZP_21456738.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-78]
gi|445489834|ref|ZP_21458842.1| peptide chain release factor 2 [Acinetobacter baumannii AA-014]
gi|169147294|emb|CAM85155.1| peptide chain release factor 2 [Acinetobacter baumannii AYE]
gi|183211424|gb|ACC58822.1| Protein chain release factor B [Acinetobacter baumannii ACICU]
gi|213058215|gb|ACJ43117.1| peptide chain release factor 2 [Acinetobacter baumannii AB0057]
gi|213988530|gb|ACJ58829.1| peptide chain release factor 2 [Acinetobacter baumannii AB307-0294]
gi|260408712|gb|EEX02017.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 19606
= CIP 70.34]
gi|322509742|gb|ADX05196.1| Peptide chain release factor 2 [Acinetobacter baumannii 1656-2]
gi|323519757|gb|ADX94138.1| protein chain release factor B [Acinetobacter baumannii
TCDC-AB0715]
gi|332727820|gb|EGJ59224.1| peptide chain release factor 2 [Acinetobacter baumannii 6013150]
gi|332732991|gb|EGJ64193.1| peptide chain release factor 2 [Acinetobacter baumannii 6013113]
gi|332738987|gb|EGJ69849.1| peptide chain release factor 2 [Acinetobacter baumannii 6014059]
gi|333365506|gb|EGK47520.1| protein chain release factor B [Acinetobacter baumannii AB210]
gi|342225429|gb|EGT90427.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH3]
gi|342226136|gb|EGT91111.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH2]
gi|342226869|gb|EGT91822.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH1]
gi|342235921|gb|EGU00477.1| peptide chain release factor 2 [Acinetobacter baumannii ABNIH4]
gi|347595444|gb|AEP08165.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-ZJ06]
gi|385876743|gb|AFI93838.1| peptide chain release factor 2 [Acinetobacter baumannii MDR-TJ]
gi|395524778|gb|EJG12867.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC137]
gi|395551480|gb|EJG17489.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC189]
gi|395557456|gb|EJG23457.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC143]
gi|395564651|gb|EJG26302.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC109]
gi|395570761|gb|EJG31423.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-17]
gi|398327426|gb|EJN43560.1| peptide chain release factor 2 [Acinetobacter baumannii AC12]
gi|400205833|gb|EJO36813.1| peptide chain release factor 2 [Acinetobacter baumannii Canada
BC-5]
gi|400211818|gb|EJO42780.1| peptide chain release factor 2 [Acinetobacter baumannii IS-123]
gi|400384022|gb|EJP42700.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC032]
gi|400392010|gb|EJP59057.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-81]
gi|404560484|gb|EKA65727.1| peptide chain release factor 2 [Acinetobacter baumannii IS-143]
gi|404564414|gb|EKA69593.1| peptide chain release factor 2 [Acinetobacter baumannii IS-116]
gi|404570215|gb|EKA75292.1| peptide chain release factor 2 [Acinetobacter baumannii WC-692]
gi|404572504|gb|EKA77546.1| peptide chain release factor 2 [Acinetobacter baumannii IS-58]
gi|404665558|gb|EKB33520.1| peptide chain release factor 2 [Acinetobacter baumannii Ab33333]
gi|404669372|gb|EKB37265.1| peptide chain release factor 2 [Acinetobacter baumannii Ab11111]
gi|404675518|gb|EKB43217.1| peptide chain release factor 2 [Acinetobacter baumannii Ab44444]
gi|407189188|gb|EKE60416.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1122]
gi|407189602|gb|EKE60828.1| peptide chain release factor 2 [Acinetobacter baumannii ZWS1219]
gi|407899318|gb|AFU36149.1| peptide chain release factor 2 [Acinetobacter baumannii TYTH-1]
gi|408510504|gb|EKK12166.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-72]
gi|408510949|gb|EKK12608.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC0162]
gi|408514648|gb|EKK16254.1| peptide chain release factor 2 [Acinetobacter baumannii IS-235]
gi|408516005|gb|EKK17584.1| peptide chain release factor 2 [Acinetobacter baumannii IS-251]
gi|408699717|gb|EKL45192.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC074]
gi|408701749|gb|EKL47171.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC098]
gi|408702875|gb|EKL48283.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-13]
gi|408703358|gb|EKL48756.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-83]
gi|408709733|gb|EKL54974.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC180]
gi|408713935|gb|EKL59090.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC110]
gi|409988821|gb|EKO44989.1| peptide chain release factor 2 [Acinetobacter baumannii AC30]
gi|410380761|gb|EKP33341.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC087]
gi|410385762|gb|EKP38246.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC065]
gi|410386695|gb|EKP39163.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC099]
gi|410390375|gb|EKP42768.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC111]
gi|410397005|gb|EKP49259.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-82]
gi|410402189|gb|EKP54313.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-21]
gi|410405301|gb|EKP57342.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-2]
gi|410409888|gb|EKP61810.1| peptide chain release factor 2 [Acinetobacter baumannii Canada BC1]
gi|410412461|gb|EKP64320.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-694]
gi|410417037|gb|EKP68808.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC035]
gi|425491692|gb|EKU57972.1| peptide chain release factor 2 [Acinetobacter baumannii WC-348]
gi|425497497|gb|EKU63603.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-113]
gi|444755677|gb|ELW80253.1| peptide chain release factor 2 [Acinetobacter baumannii WC-A-92]
gi|444766276|gb|ELW90551.1| peptide chain release factor 2 [Acinetobacter baumannii AA-014]
gi|444767702|gb|ELW91948.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-78]
gi|444772678|gb|ELW96793.1| peptide chain release factor 2 [Acinetobacter baumannii OIFC338]
gi|444779724|gb|ELX03697.1| peptide chain release factor 2 [Acinetobacter baumannii Naval-57]
gi|452952896|gb|EME58320.1| peptide chain release factor 2 [Acinetobacter baumannii MSP4-16]
Length = 310
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|157164977|ref|YP_001467027.1| peptide chain release factor 2 [Campylobacter concisus 13826]
gi|166223623|sp|A7ZE19.1|RF2_CAMC1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|112800036|gb|EAT97380.1| peptide chain release factor 2 [Campylobacter concisus 13826]
Length = 366
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ ++D +I+EKD++ R SG GGQ V KT + + +THIPTGI
Sbjct: 211 RRHTSF-SSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQHVNKTESAIRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR TA ++L
Sbjct: 270 VVQCQNDRSQHKNRATAMKML 290
>gi|7688054|emb|CAB89696.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris]
Length = 374
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 212 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 271 VVACQTGRSQHQNRDNAMKMLAAK 294
>gi|56460033|ref|YP_155314.1| protein chain release factor A [Idiomarina loihiensis L2TR]
gi|61214579|sp|Q5QUZ8.1|RF1_IDILO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|56179043|gb|AAV81765.1| Protein chain release factor A [Idiomarina loihiensis L2TR]
Length = 364
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I+ D++ R SG GGQ V +T++ + LTHIPTG+V++C + RS +NR A +
Sbjct: 219 EINPADLRVDTYRASGAGGQHVNRTDSAIRLTHIPTGVVVECQEERSQHKNRAKAMSV-- 276
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
L A+I+R+ DEKR+A ++ +R L
Sbjct: 277 ------------LQARIQRLEDEKRQAEEDSTRRNL 300
>gi|25027860|ref|NP_737914.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
gi|259506251|ref|ZP_05749153.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
gi|81749553|sp|Q8FQ31.1|RF1_COREF RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|23493143|dbj|BAC18114.1| putative peptide chain release factor 1 [Corynebacterium efficiens
YS-314]
gi|259166155|gb|EEW50709.1| peptide chain release factor 1 [Corynebacterium efficiens YS-314]
Length = 358
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+IDEK+I+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L
Sbjct: 217 EIDEKEIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLA 276
Query: 87 A 87
A
Sbjct: 277 A 277
>gi|365153304|ref|ZP_09349744.1| peptide chain release factor 2 [Campylobacter sp. 10_1_50]
gi|363651832|gb|EHL90884.1| peptide chain release factor 2 [Campylobacter sp. 10_1_50]
Length = 366
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ ++D +I+EKD++ R SG GGQ V KT + + +THIPTGI
Sbjct: 211 RRHTSF-SSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQHVNKTESAIRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR TA ++L
Sbjct: 270 VVQCQNDRSQHKNRATAMKML 290
>gi|329114780|ref|ZP_08243537.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
gi|326695911|gb|EGE47595.1| Peptide chain release factor 2 [Acetobacter pomorum DM001]
Length = 333
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I++ D++ R SG GGQ V KT++ + +TH+PTGI
Sbjct: 167 RRQTSFASVWVYPV-IDDSIEIEINDADLKVDTFRASGAGGQHVNKTDSAIRITHMPTGI 225
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA ++L A
Sbjct: 226 VVACQTDRSQHRNRATAMQMLRA 248
>gi|169634751|ref|YP_001708487.1| peptide chain release factor 2 [Acinetobacter baumannii SDF]
gi|169153543|emb|CAP02711.1| peptide chain release factor 2 [Acinetobacter baumannii]
Length = 310
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|163784774|ref|ZP_02179571.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
gi|159879956|gb|EDP73663.1| peptide chain release factor RF-2 [Hydrogenivirga sp. 128-5-R1-1]
Length = 348
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 10/114 (8%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ + KV +I+E D++ R SG GGQ V KT++ V +THIPTGI
Sbjct: 188 RRHTSFAAVSVIPEIGEEIKV-EINEDDLRIDTFRASGAGGQHVNKTDSAVRITHIPTGI 246
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKK 118
V+ C RS +NR A ++L A+ +I + EKR+ + +KK
Sbjct: 247 VVSCQSERSQIQNRAKAMQMLKAKL---------YQLEIEKQKEKRKELEGEKK 291
>gi|435854879|ref|YP_007316198.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
gi|433671290|gb|AGB42105.1| peptide chain release factor 2 [Halobacteroides halobius DSM 5150]
Length = 362
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD ID+ D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 209 RRHTSFASVDVMP-ELDEDIEVDIDKSDLKIETYRASGAGGQHVNTTDSAVRITHLPTGI 267
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V +C RS +NR+ A ++L A+
Sbjct: 268 VAQCQNERSQHKNRQGAMKVLQAK 291
>gi|406989550|gb|EKE09321.1| hypothetical protein ACD_16C00192G0003 [uncultured bacterium]
Length = 337
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D + +I++KD++ R SG GGQ V KT++ + +TH+PTG+
Sbjct: 180 RRHTSFASVWVYPEVEDTIDI-QIEDKDLRIDTYRASGAGGQHVNKTDSAIRITHLPTGV 238
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A +L A
Sbjct: 239 VVQCQNDRSQHRNRAQAMSMLKA 261
>gi|416117295|ref|ZP_11594598.1| Peptide chain release factor 2 [Campylobacter concisus UNSWCD]
gi|384577252|gb|EIF06544.1| Peptide chain release factor 2 [Campylobacter concisus UNSWCD]
Length = 366
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 51/81 (62%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ ++D +I+EKD++ R SG GGQ V KT + + +THIPTGI
Sbjct: 211 RRHTSF-SSVMVSPEVDDDIEIEIEEKDLKIDTYRASGAGGQHVNKTESAIRITHIPTGI 269
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C RS +NR TA ++L
Sbjct: 270 VVQCQNDRSQHKNRATAMKML 290
>gi|325922147|ref|ZP_08183937.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
gardneri ATCC 19865]
gi|325547382|gb|EGD18446.1| bacterial peptide chain release factor 2 (bRF-2) [Xanthomonas
gardneri ATCC 19865]
Length = 329
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 167 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 225
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 226 VVACQTGRSQHQNRDNAMKMLAAK 249
>gi|221198422|ref|ZP_03571468.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2M]
gi|221208901|ref|ZP_03581898.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2]
gi|221214768|ref|ZP_03587737.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD1]
gi|221165307|gb|EED97784.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD1]
gi|221171184|gb|EEE03634.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2]
gi|221182354|gb|EEE14755.1| peptide chain release factor 2, programmed frameshift [Burkholderia
multivorans CGD2M]
Length = 367
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 215 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 274 VQCQNDRSQHRNRAEAMAML 293
>gi|340750397|ref|ZP_08687242.1| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
gi|340562475|gb|EEO35079.2| peptide chain release factor 2 [Fusobacterium mortiferum ATCC 9817]
Length = 326
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS ++D S ID DI+ R SG GGQ V T++ V +TH PTGI
Sbjct: 170 KRHTSFASVEVVP-EVDDSIEVNIDPSDIRIDTYRASGAGGQHVNMTDSAVRITHFPTGI 228
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C + RS NR+TA +LL
Sbjct: 229 VVTCQRERSQLSNRETAMKLL 249
>gi|375136401|ref|YP_004997051.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
gi|427426361|ref|ZP_18916419.1| peptide chain release factor 2 [Acinetobacter baumannii WC-136]
gi|325123846|gb|ADY83369.1| peptide chain release factor 2 [Acinetobacter calcoaceticus PHEA-2]
gi|425696822|gb|EKU66520.1| peptide chain release factor 2 [Acinetobacter baumannii WC-136]
Length = 310
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|32474334|ref|NP_867328.1| peptide chain release factor 2 [Rhodopirellula baltica SH 1]
gi|417300696|ref|ZP_12087893.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|421613631|ref|ZP_16054704.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|440716673|ref|ZP_20897177.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
gi|32444872|emb|CAD74874.1| peptide chain release factor 2 (RF-2) [Rhodopirellula baltica SH 1]
gi|327543020|gb|EGF29467.1| peptide chain release factor 2 [Rhodopirellula baltica WH47]
gi|408495590|gb|EKK00176.1| peptide chain release factor 2 [Rhodopirellula baltica SH28]
gi|436438170|gb|ELP31730.1| Peptide chain release factor 2 [Rhodopirellula baltica SWK14]
Length = 337
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 46/70 (65%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
++D S +++KD++E R SG GGQ V KT++ + LTHIPT V++C RS +NR
Sbjct: 183 EIDDSIEVNVEKKDVREDTYRASGAGGQHVNKTDSAIRLTHIPTNTVVQCQNQRSQHQNR 242
Query: 79 KTARELLVAQ 88
TA ++L A+
Sbjct: 243 DTAWKMLRAK 252
>gi|357589082|ref|ZP_09127748.1| peptide chain release factor 1 [Corynebacterium nuruki S6-4]
Length = 361
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+KD++ R SG GGQ V T++ V +TH+PTGIV+ C + RS +NR A ++L
Sbjct: 220 QIDDKDLRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNRARAMQVLA 279
Query: 87 A 87
A
Sbjct: 280 A 280
>gi|224369062|ref|YP_002603226.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
gi|223691779|gb|ACN15062.1| hypothetical protein HRM2_19610 [Desulfobacterium autotrophicum
HRM2]
Length = 118
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I++ DI+E+FV+GSG GGQ V KT+ V L H+PTGI +KC RS NR A LV
Sbjct: 21 INKADIEEKFVKGSGRGGQKVNKTSVAVFLRHLPTGITVKCGSERSQHLNRFLALRRLVD 80
Query: 88 QWDVQVNGEDS 98
+ + + G +
Sbjct: 81 RIEACMTGMEG 91
>gi|88812905|ref|ZP_01128149.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
gi|88789827|gb|EAR20950.1| hypothetical protein NB231_00155 [Nitrococcus mobilis Nb-231]
Length = 325
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S A+ +F +LD + +I+ D++ R SG GGQ V +T + V +TH+PTGI
Sbjct: 172 RRHTSFAA-VFVSPELDDAVEVEINPADLRIDVYRASGAGGQHVNRTESAVRITHMPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V +C RS +N+ TA + L A+
Sbjct: 231 VTQCQNDRSQHKNKATAMKQLRAK 254
>gi|21231300|ref|NP_637217.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66768648|ref|YP_243410.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. 8004]
gi|188991534|ref|YP_001903544.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris str. B100]
gi|21112954|gb|AAM41141.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris str. ATCC 33913]
gi|66573980|gb|AAY49390.1| putative peptide release factor 2 [Xanthomonas campestris pv.
campestris str. 8004]
gi|167733294|emb|CAP51493.1| peptide chain release factor 2 [Xanthomonas campestris pv.
campestris]
Length = 313
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 151 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 209
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 210 VVACQTGRSQHQNRDNAMKMLAAK 233
>gi|58260798|ref|XP_567809.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
neoformans JEC21]
gi|134117261|ref|XP_772857.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255475|gb|EAL18210.1| hypothetical protein CNBK2280 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229890|gb|AAW46292.1| hypothetical protein CNK01240 [Cryptococcus neoformans var.
neoformans JEC21]
Length = 480
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPTGI
Sbjct: 308 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGI 367
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
+ SRS +NR A E+L A+ + + E+ + R D+ + A + K R +
Sbjct: 368 TVSMQDSRSQHQNRTWAWEILRARLSEKKHNEEVEARRASRRDQVKGADRSDKIRTYN 425
>gi|418296153|ref|ZP_12907997.1| peptide chain release factor 2 [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539585|gb|EHH08823.1| peptide chain release factor 2 [Agrobacterium tumefaciens
CCNWGS0286]
Length = 322
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ E++ NAQ
Sbjct: 215 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQ 254
>gi|296114415|ref|ZP_06833069.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
gi|295979176|gb|EFG85900.1| peptide chain release factor 2 [Gluconacetobacter hansenii ATCC
23769]
Length = 322
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-IDDSIEIDINEADLRVDTFRASGAGGQHVNKTESAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 215 VVACQTDRSQHRNRATAMAMLKA 237
>gi|456864581|gb|EMF82980.1| putative peptide chain release factor 2 [Leptospira weilii serovar
Topaz str. LT2116]
Length = 215
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S + ++D KI+EKDI+ R SG GGQ V T++ V +TH+P+G+
Sbjct: 62 RRHTSFVS-VHVSPEIDDEIDIKIEEKDIRVDVYRSSGAGGQHVNTTDSAVRITHLPSGV 120
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA ++L A+
Sbjct: 121 VVACQNERSQIKNRDTAFKMLKAR 144
>gi|374621851|ref|ZP_09694380.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
gi|373940981|gb|EHQ51526.1| peptide chain release factor 1 [Ectothiorhodospira sp. PHS-1]
Length = 360
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 44/68 (64%)
Query: 21 DYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKT 80
D ++P+I+ D++ R SG GGQ V +T++ V LTH+PTG+V++C RS +N+
Sbjct: 212 DEMEIPEINPADLRIDTYRASGAGGQHVNRTDSAVRLTHLPTGLVVECQDERSQHKNKAR 271
Query: 81 ARELLVAQ 88
A LL A+
Sbjct: 272 AMSLLAAK 279
>gi|358447048|ref|ZP_09157584.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
gi|356607022|emb|CCE55939.1| peptide chain release factor 1 [Corynebacterium casei UCMA 3821]
Length = 358
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEKDI+ R SG GGQ V T++ V LTH+PTG+V+ C + RS +N+ A ++L A
Sbjct: 218 IDEKDIRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGLVVTCQRERSQIQNKARAMQVLQA 277
>gi|257066737|ref|YP_003152993.1| peptide chain release factor 2 [Anaerococcus prevotii DSM 20548]
gi|256798617|gb|ACV29272.1| bacterial peptide chain release factor 2 (bRF- 2) [Anaerococcus
prevotii DSM 20548]
Length = 367
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 3/82 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + LD + ID D++ R SG GGQ V KT++ V +THIPTG
Sbjct: 214 RRHTSFASVDVFPE--LDENIELDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 271
Query: 64 IVIKCHQSRSLSENRKTARELL 85
+V RS +NR+TA LL
Sbjct: 272 VVATSQAERSQIQNRQTAMNLL 293
>gi|116620705|ref|YP_822861.1| peptide chain release factor 2 [Candidatus Solibacter usitatus
Ellin6076]
gi|116223867|gb|ABJ82576.1| bacterial peptide chain release factor 2 (bRF-2) [Candidatus
Solibacter usitatus Ellin6076]
Length = 322
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 5 RRHLSLASSL-FRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS F + D D K+ I +KD++ R SG GGQ V T++ V +TH PTG
Sbjct: 154 RRHTSFASVFVFPQVD-DEIKI-DIQDKDLRIDTFRASGAGGQHVNMTDSAVRITHFPTG 211
Query: 64 IVIKCHQSRSLSENRKTARELLVA 87
IV++C RS +NR TA + L A
Sbjct: 212 IVVQCQNERSQHKNRATAMKQLRA 235
>gi|424743687|ref|ZP_18171994.1| peptide chain release factor 2 [Acinetobacter baumannii WC-141]
gi|422943202|gb|EKU38226.1| peptide chain release factor 2 [Acinetobacter baumannii WC-141]
Length = 310
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|257457828|ref|ZP_05622987.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
gi|257444541|gb|EEV19625.1| peptide chain release factor 2 [Treponema vincentii ATCC 35580]
Length = 363
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ LD + I +D++ R G GGQ V KT++ V LTH+PTGI
Sbjct: 198 RRHTSF-SSVYVFPVLDDTIEVNIRPEDLRVDTYRAGGAGGQHVNKTDSAVRLTHLPTGI 256
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR TA +L A
Sbjct: 257 VVACQNERSQISNRATAMSMLKA 279
>gi|187478021|ref|YP_786045.1| peptide chain release factor 2 [Bordetella avium 197N]
gi|123515203|sp|Q2L224.1|RF2_BORA1 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|115422607|emb|CAJ49132.1| peptide chain release factor 2 [Bordetella avium 197N]
Length = 367
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S +++ D++ R SG GGQ + KT++ V +TH+P+GIV
Sbjct: 215 RHTSFAS-VFVYPEVDESFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHMPSGIV 273
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A ++L
Sbjct: 274 VQCQNDRSQHRNRAEAMQML 293
>gi|424864710|ref|ZP_18288613.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
gi|400759456|gb|EJP73638.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86B]
Length = 361
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
ID+ D++ R SG GGQ V KT++ V LTHIPTG+V++C RS +N++ A LL A
Sbjct: 219 IDKNDLRVDTFRASGAGGQHVNKTDSAVRLTHIPTGLVVECQDGRSQHKNKEKALSLLAA 278
Query: 88 QW 89
+
Sbjct: 279 KL 280
>gi|118473158|ref|YP_886446.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399986457|ref|YP_006566806.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|166225108|sp|A0QU58.1|RF2_MYCS2 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|118174445|gb|ABK75341.1| peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
gi|399231018|gb|AFP38511.1| Peptide chain release factor 2 [Mycobacterium smegmatis str. MC2
155]
Length = 368
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 41/62 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I E DI+ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L
Sbjct: 231 EIPENDIRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQ 290
Query: 87 AQ 88
A+
Sbjct: 291 AK 292
>gi|402566096|ref|YP_006615441.1| peptide chain release factor 2 [Burkholderia cepacia GG4]
gi|402247293|gb|AFQ47747.1| peptide chain release factor 2 [Burkholderia cepacia GG4]
Length = 298
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 146 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 204
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 205 VQCQNDRSQHRNRAEAMAML 224
>gi|417931626|ref|ZP_12574991.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
gi|340775569|gb|EGR97622.1| peptide chain release factor 1 [Propionibacterium acnes
SK182B-JCVI]
Length = 361
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S R H S L D+D ++V ID D++ R SGPGGQ V T++ V LTH+P
Sbjct: 192 SAGRIHTSAVGVLVMP-DVDETEV-DIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLP 249
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV C RS +N+ A +L A+
Sbjct: 250 TGIVASCQNERSQLQNKAEAMRMLRAK 276
>gi|288923233|ref|ZP_06417373.1| peptide chain release factor 2 [Frankia sp. EUN1f]
gi|288345407|gb|EFC79796.1| peptide chain release factor 2 [Frankia sp. EUN1f]
Length = 366
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDEK+++ R SGPGGQ V T++ V +TH+PTGIV+ C RS +N+ A +L A
Sbjct: 228 IDEKELRIDIFRSSGPGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKAAAMMVLQA 287
Query: 88 Q 88
+
Sbjct: 288 K 288
>gi|408786043|ref|ZP_11197783.1| peptide chain release factor 2 [Rhizobium lupini HPC(L)]
gi|408488232|gb|EKJ96546.1| peptide chain release factor 2 [Rhizobium lupini HPC(L)]
Length = 322
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSVWVYPVVDDSIQIDINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVAQ-WDVQVNG-EDSLNAQ 102
+ C Q RS +NR A ++L A+ ++V++ E++ NAQ
Sbjct: 215 AVACQQERSQHKNRAKAWDMLRARLYEVELQKREEAANAQ 254
>gi|395204882|ref|ZP_10395822.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
gi|328907544|gb|EGG27310.1| peptide chain release factor 1 [Propionibacterium humerusii P08]
Length = 361
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 208 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNK 266
Query: 79 KTARELLVAQ 88
A +L A+
Sbjct: 267 AEAMRMLRAK 276
>gi|312142853|ref|YP_003994299.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
gi|311903504|gb|ADQ13945.1| peptide chain release factor 2 [Halanaerobium hydrogeniformans]
Length = 346
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD IDE D++ R SG GGQ V KT++ V +TH PTG+
Sbjct: 190 RRHTSFASVDVLP-ELDDELEVDIDENDLRIETYRASGAGGQHVNKTDSAVRITHQPTGV 248
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +N+ A ++L ++
Sbjct: 249 VVQCQSQRSQHKNKNVAMKILSSK 272
>gi|332284056|ref|YP_004415967.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
gi|330428009|gb|AEC19343.1| peptide chain release factor 2 [Pusillimonas sp. T7-7]
Length = 359
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S AS +F ++D S I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 207 RHTSFAS-VFVYPEVDESVEIDINPADLRVDTYRASGAGGQHINKTDSAVRITHMPTGIV 265
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 266 VQCQNDRSQHRNRAEAMSML 285
>gi|193078655|gb|ABO13705.2| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
Length = 305
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 157 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 215
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 216 VVACQNQRSQHANRDHA 232
>gi|110634059|ref|YP_674267.1| peptide chain release factor 2 [Chelativorans sp. BNC1]
gi|110285043|gb|ABG63102.1| bacterial peptide chain release factor 2 (bRF-2) [Chelativorans sp.
BNC1]
Length = 322
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS ++ +D S +I E +++ R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSFAS-IWVYPVIDDSIEIEIPESEVRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ C Q RS +NR A E+L A
Sbjct: 215 AVACQQERSQHKNRAKAWEMLRA 237
>gi|421870204|ref|ZP_16301839.1| Peptide chain release factor 2 [Burkholderia cenocepacia H111]
gi|358069730|emb|CCE52717.1| Peptide chain release factor 2 [Burkholderia cenocepacia H111]
Length = 391
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 239 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 297
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 298 VQCQNDRSQHRNRAEAMAML 317
>gi|289663374|ref|ZP_06484955.1| peptide chain release factor 2, partial [Xanthomonas campestris pv.
vasculorum NCPPB 702]
gi|289668830|ref|ZP_06489905.1| peptide chain release factor 2, partial [Xanthomonas campestris pv.
musacearum NCPPB 4381]
Length = 276
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S +S+F ++D + I+ D++ R SG GGQ V KT + V +THIPT
Sbjct: 114 RRHTSF-TSVFVSPEVDDNIEIDINPADLRTDVYRSSGAGGQHVNKTESAVRITHIPTNT 172
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR A ++L A+
Sbjct: 173 VVACQTGRSQHQNRDNAMKMLAAK 196
>gi|218779410|ref|YP_002430728.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
AK-01]
gi|218760794|gb|ACL03260.1| peptide chain release factor 2 [Desulfatibacillum alkenivorans
AK-01]
Length = 327
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+R S AS ++D V ++EKD++ R SG GGQ V KT++ V + HIPTGI
Sbjct: 172 KRQTSFASVAVYP-EIDQEIVVDVNEKDLRIDVFRASGAGGQHVNKTSSAVRILHIPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C Q +S NR A ++L A
Sbjct: 231 VVQCQQEKSQHRNRDLAMKVLKA 253
>gi|188997267|ref|YP_001931518.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
gi|229576671|sp|B2V5M0.1|RF2_SULSY RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|188932334|gb|ACD66964.1| peptide chain release factor 2 [Sulfurihydrogenibium sp. YO3AOP1]
Length = 369
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Query: 5 RRHLSL-ASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S A S+ + D D KV +I+E+D++ R SG GGQ V KT++ V +THIPTG
Sbjct: 211 RRHTSFSAVSVIPEIDEDI-KV-EINEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 268
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
IV+ C RS +N+ A +L A+
Sbjct: 269 IVVACQSERSQLQNKLKATNMLKAK 293
>gi|408379573|ref|ZP_11177167.1| peptide chain release factor 2 [Agrobacterium albertimagni AOL15]
gi|407747057|gb|EKF58579.1| peptide chain release factor 2 [Agrobacterium albertimagni AOL15]
Length = 321
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTGI
Sbjct: 156 RRHTSF-SSIWVYPVVDDSIQIEINESDCRIDTYRSSGAGGQHVNTTDSAVRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
+ C Q RS +NR A ++L A
Sbjct: 215 AVACQQERSQHKNRAKAWDMLRA 237
>gi|359772386|ref|ZP_09275815.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
gi|359310486|dbj|GAB18593.1| peptide chain release factor 2 [Gordonia effusa NBRC 100432]
Length = 371
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 40/61 (65%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I+E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A +L A
Sbjct: 235 INENDLRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKAAAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|319789223|ref|YP_004150856.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
gi|317113725|gb|ADU96215.1| hypothetical protein Theam_0242 [Thermovibrio ammonificans HB-1]
Length = 373
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S + ++D +I E+D++ R SG GGQ V KT++ V +THIPTGI
Sbjct: 213 RRHTSFCGVIVVP-EIDEDIEVEIKEEDLRIDTYRASGAGGQHVNKTDSAVRITHIPTGI 271
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +NR+ A ++L A
Sbjct: 272 VVTCQSERSQIQNRQRAMKILKA 294
>gi|162147177|ref|YP_001601638.1| peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
gi|161785754|emb|CAP55325.1| Peptide chain release factor 2 [Gluconacetobacter diazotrophicus
PAl 5]
Length = 322
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I+E D++ R SG GGQ V KT + + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-VDDSIEIEINEADLKVDTFRASGAGGQHVNKTESAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
++ C RS NR TA +L A
Sbjct: 215 IVACQTDRSQHRNRATAMTMLKA 237
>gi|444360903|ref|ZP_21162066.1| peptide chain release factor 2 [Burkholderia cenocepacia BC7]
gi|444372627|ref|ZP_21172067.1| peptide chain release factor 2 [Burkholderia cenocepacia
K56-2Valvano]
gi|443593214|gb|ELT61967.1| peptide chain release factor 2 [Burkholderia cenocepacia
K56-2Valvano]
gi|443599015|gb|ELT67326.1| peptide chain release factor 2 [Burkholderia cenocepacia BC7]
Length = 391
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 239 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 297
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 298 VQCQNDRSQHRNRAEAMAML 317
>gi|405119283|gb|AFR94056.1| peptide chain release factor 1 [Cryptococcus neoformans var. grubii
H99]
Length = 471
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPTGI
Sbjct: 299 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGI 358
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
+ SRS +NR A E+L A+ + + E+ + R D+ + A + K R +
Sbjct: 359 TVSMQDSRSQHQNRAWAWEILRARLSEKKHNEEVEARRASRRDQVKGADRSDKIRTYN 416
>gi|350569217|ref|ZP_08937613.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
gi|348660035|gb|EGY76745.1| peptide chain release factor RF1 [Propionibacterium avidum ATCC
25577]
Length = 372
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 2/87 (2%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S R H S L D+D ++V ID D++ R SGPGGQ V T++ V LTH+P
Sbjct: 202 SAGRIHTSAVGVLVMP-DVDETEV-DIDPADVRVDVYRSSGPGGQGVNTTDSAVRLTHLP 259
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGIV C RS +N+ A +L A+
Sbjct: 260 TGIVASCQNERSQLQNKAEAMRMLRAK 286
>gi|170733471|ref|YP_001765418.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
gi|169816713|gb|ACA91296.1| peptide chain release factor 2 [Burkholderia cenocepacia MC0-3]
Length = 391
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 239 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 297
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 298 VQCQNDRSQHRNRAEAMAML 317
>gi|451979627|ref|ZP_21928042.1| Peptide chain release factor 2 (RF-2) [Nitrospina gracilis 3/211]
gi|451763155|emb|CCQ89239.1| Peptide chain release factor 2 (RF-2) [Nitrospina gracilis 3/211]
Length = 301
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 51/84 (60%), Gaps = 7/84 (8%)
Query: 5 RRHLSLASSL-FRKY--DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
RRH S AS F + D+D ++ + D++ R SGPGGQ V T++ V +TH+P
Sbjct: 144 RRHTSFASVFVFPEVAEDIDV----EVKDDDLKIDVYRASGPGGQGVNTTDSAVRITHMP 199
Query: 62 TGIVIKCHQSRSLSENRKTARELL 85
TGIV++C RS +N+ +A ++L
Sbjct: 200 TGIVVQCQNERSQHKNKASAMKVL 223
>gi|374262094|ref|ZP_09620667.1| hypothetical protein LDG_7072 [Legionella drancourtii LLAP12]
gi|363537502|gb|EHL30923.1| hypothetical protein LDG_7072 [Legionella drancourtii LLAP12]
Length = 135
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 45/75 (60%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I+E + E+F+ GSG GGQ + KT + V L H+P+GI IKC +SRS NR AR L
Sbjct: 19 INEDSLIEKFIIGSGKGGQKLHKTASTVYLKHVPSGIEIKCQESRSREGNRYFARVRLCE 78
Query: 88 QWDVQVNGEDSLNAQ 102
++ ++ E + Q
Sbjct: 79 KYHAIISDEKTKEQQ 93
>gi|71281667|ref|YP_270738.1| peptide chain release factor 2, programmed frameshift, partial
[Colwellia psychrerythraea 34H]
gi|123631202|sp|Q47WT4.1|RF2_COLP3 RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|71147407|gb|AAZ27880.1| peptide chain release factor 2, programmed frameshift [Colwellia
psychrerythraea 34H]
Length = 365
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS+ F ++D + I+ D++ R SG GGQ V KT++ + +TH PTG
Sbjct: 212 RRHTSFASA-FIYPEIDDNIEIDINPADLRIDTFRASGAGGQHVNKTDSAIRITHEPTGA 270
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA +LL A+
Sbjct: 271 VVACQADRSQHKNRATAMKLLKAK 294
>gi|408829229|ref|ZP_11214119.1| peptide chain release factor 1 [Streptomyces somaliensis DSM 40738]
Length = 358
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA----- 81
+I+ D++ R SGPGGQ+V T++ V +TH+PTG+V C +S +N++ A
Sbjct: 218 EINPNDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGVVASCQNEKSQLQNKEQAMRILR 277
Query: 82 -RELLVAQWDVQVNGEDSLNAQIRRID 107
R L AQ + + N D+ +Q+R +D
Sbjct: 278 SRLLAAAQEEAERNAADARRSQVRTVD 304
>gi|365960564|ref|YP_004942131.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
gi|365737245|gb|AEW86338.1| peptide chain release factor-like protein [Flavobacterium columnare
ATCC 49512]
Length = 249
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S FR+ + +++ + +P EKDIQ + +R SG GGQ V K ++ + TH+P
Sbjct: 100 STFRKFHKRKNWFIGIFEVPLTILPTFSEKDIQYQAMRSSGAGGQHVNKVSSAIRATHLP 159
Query: 62 TGIVIKCHQSRSLSENRKTARELLVAQ 88
TGI + SRS +N+K A E L+A+
Sbjct: 160 TGISVVSMDSRSQHQNKKLATERLLAK 186
>gi|296814610|ref|XP_002847642.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
CBS 113480]
gi|238840667|gb|EEQ30329.1| peptidyl-tRNA hydrolase domain-containing protein [Arthroderma otae
CBS 113480]
Length = 247
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 42/137 (30%)
Query: 26 PKIDEKDIQERFVRGSGPGGQAVA------------------------------KTNNCV 55
P ID+ +I +++GSGPGGQ + KTN+ V
Sbjct: 75 PTIDDSEISGSYLKGSGPGGQKINEYFNKKKYPILYSKLIIHEHPYSAEDKCQNKTNSAV 134
Query: 56 VLTHIPTGIVIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDE------- 108
L HIPT V+KC +RS S+NRK A+++L + ++ G+ S A + + +
Sbjct: 135 QLIHIPTNTVVKCQATRSQSQNRKIAKQILAEKVELLEKGDQSRAAIVTNVKKKRKASKM 194
Query: 109 -----KRRATQEQKKRK 120
K RA +E+K++K
Sbjct: 195 KKSRRKYRALEEEKRKK 211
>gi|433649352|ref|YP_007294354.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
smegmatis JS623]
gi|433299129|gb|AGB24949.1| bacterial peptide chain release factor 1 (bRF-1) [Mycobacterium
smegmatis JS623]
Length = 357
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELL- 85
+IDE D++ R SG GGQ V T++ V +TH+PTGIV+ C RS +N+ A ++L
Sbjct: 217 QIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQNERSQLQNKARALQVLA 276
Query: 86 -----VAQWDVQVNGEDSLNAQIRRIDEKRR 111
+A+ Q + +QIR +D R
Sbjct: 277 ARLQALAEEQAQADASADRASQIRTVDRSER 307
>gi|321264047|ref|XP_003196741.1| peptide chain release factor 1, mitochondrial precursor
[Cryptococcus gattii WM276]
gi|317463218|gb|ADV24954.1| Peptide chain release factor 1, mitochondrial precursor, putative
[Cryptococcus gattii WM276]
Length = 476
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 61/118 (51%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S + + D ++ P +D KD++ +R G GGQ V +T + V LTHIPTGI
Sbjct: 304 RIHTSTVAVIVLPMYPDTAEAPLVDPKDVRIDVMRARGAGGQHVNRTESAVRLTHIPTGI 363
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRKLD 122
+ SRS +NR A E+L A+ + + E+ + R D+ + A + K R +
Sbjct: 364 TVSMQDSRSQHQNRAWAWEILRARLSEKKHNEEVEARRASRRDQVKGADRSDKIRTYN 421
>gi|78066892|ref|YP_369661.1| peptide chain release factor 2 [Burkholderia sp. 383]
gi|77967637|gb|ABB09017.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia sp.
383]
Length = 391
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 239 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 297
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 298 VQCQNDRSQHRNRAEAMAML 317
>gi|107028703|ref|YP_625798.1| peptide chain release factor 2 [Burkholderia cenocepacia AU 1054]
gi|116690138|ref|YP_835761.1| peptide chain release factor 2 [Burkholderia cenocepacia HI2424]
gi|105897867|gb|ABF80825.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
cenocepacia AU 1054]
gi|116648227|gb|ABK08868.1| bacterial peptide chain release factor 2 (bRF-2) [Burkholderia
cenocepacia HI2424]
Length = 391
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 239 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 297
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 298 VQCQNDRSQHRNRAEAMAML 317
>gi|381165911|ref|ZP_09875130.1| Peptide chain release factor 2 (RF-2) [Phaeospirillum molischianum
DSM 120]
gi|380684895|emb|CCG39942.1| Peptide chain release factor 2 (RF-2) [Phaeospirillum molischianum
DSM 120]
Length = 261
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 2 SIFRRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
S RRH S SS++ +D + +++E D + R SG GGQ V KT++ V +TH+P
Sbjct: 97 SAARRHTSF-SSVWVYPVIDDTIDIQVNESDCRIDTYRASGAGGQHVNKTDSAVRITHVP 155
Query: 62 TGIVIKCHQSRSLSENRKTARELLVA 87
TGIV C RS +NR A E+L A
Sbjct: 156 TGIVAACQMERSQHQNRARAWEMLRA 181
>gi|334563502|ref|ZP_08516493.1| peptide chain release factor 2 [Corynebacterium bovis DSM 20582]
Length = 373
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 40/60 (66%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHVPTGIVVTCQNEKSQIQNKASAMRVLQA 294
>gi|269958738|ref|YP_003328525.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
gi|269848567|gb|ACZ49211.1| peptide chain release factor 2 [Anaplasma centrale str. Israel]
Length = 338
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D + +I EKD++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 179 RRHTSFASVEVSPIADDKIDI-EILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGI 237
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C SRS +NR A LL
Sbjct: 238 VVQCQTSRSQHQNRAEAYSLL 258
>gi|453329998|dbj|GAC87976.1| translation peptide chain release factor 2 [Gluconobacter
thailandicus NBRC 3255]
Length = 322
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I++ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-VDDSIEVEINDSDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR A E+L A
Sbjct: 215 VVACQTDRSQHRNRAKAMEMLKA 237
>gi|392297787|gb|EIW08886.1| hypothetical protein CENPK1137D_656 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 155
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 30 EKDIQERFVRGS-GPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR----EL 84
E E+F+ G GPGGQ + K N+ V L H PTGIV++C ++RS +NRK AR
Sbjct: 34 EAQCTEKFLHGGRGPGGQKINKCNSKVQLRHEPTGIVVECQETRSREQNRKLARLKLARE 93
Query: 85 LVAQWDVQVNGEDSL 99
L A +D ++ E++L
Sbjct: 94 LAASYDTMLSREEAL 108
>gi|326803667|ref|YP_004321485.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
gi|326651316|gb|AEA01499.1| peptide chain release factor 1 [Aerococcus urinae ACS-120-V-Col10a]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 42/67 (62%), Gaps = 4/67 (5%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
DLD+ +IDEKDI+ R SG GGQ V KT++ V +THIPTGI + RS +NR
Sbjct: 211 DLDF----EIDEKDIRTDIYRASGAGGQHVNKTSSAVRMTHIPTGIQVAMQDQRSQQQNR 266
Query: 79 KTARELL 85
+ A +L
Sbjct: 267 EKAMLIL 273
>gi|83718832|ref|YP_442414.1| peptide chain release factor 2 [Burkholderia thailandensis E264]
gi|83652657|gb|ABC36720.1| peptide chain release factor 2, programmed [Burkholderia
thailandensis E264]
Length = 459
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 307 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 365
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 366 VQCQNDRSQHRNRAEAMAML 385
>gi|414341845|ref|YP_006983366.1| peptide chain release factor 2 [Gluconobacter oxydans H24]
gi|411027180|gb|AFW00435.1| peptide chain release factor 2 [Gluconobacter oxydans H24]
Length = 322
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I++ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-VDDSIEVEINDSDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR A E+L A
Sbjct: 215 VVACQTDRSQHRNRAKAMEMLKA 237
>gi|408421449|ref|YP_006762863.1| peptide chain release factor 2 [Desulfobacula toluolica Tol2]
gi|405108662|emb|CCK82159.1| predicted peptide chain release factor 2, related to PrfB
[Desulfobacula toluolica Tol2]
Length = 266
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
+RH S AS D K+ IDE D++ R SG GGQ V KT++ V +TH+PTG+
Sbjct: 114 KRHTSFASVFVYPEIKDEIKI-DIDESDLRIDVYRASGAGGQHVNKTSSAVRITHLPTGV 172
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C Q S N++ A ++L
Sbjct: 173 VVQCQQESSQHRNKEIAFKVL 193
>gi|315121916|ref|YP_004062405.1| peptide chain release factor 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
gi|313495318|gb|ADR51917.1| peptide chain release factor 2 [Candidatus Liberibacter
solanacearum CLso-ZC1]
Length = 354
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS++ +D S +I+E D + R SG GGQ V T++ V +THIPTG+
Sbjct: 195 RRHTSF-SSVWVYPVVDESIEIEINESDCRIDTYRASGAGGQHVNTTDSAVRITHIPTGV 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C Q RS +N+ A +L A+
Sbjct: 254 VVQCQQERSQHKNKAQAWNMLRAK 277
>gi|222475212|ref|YP_002563628.1| peptide chain release factor 2 [Anaplasma marginale str. Florida]
gi|255003190|ref|ZP_05278154.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Puerto Rico]
gi|222419349|gb|ACM49372.1| peptide chain release factor 2 (prfB) [Anaplasma marginale str.
Florida]
Length = 338
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D + +I EKD++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 179 RRHTSFASVEVSPIADDKIDI-EILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGI 237
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C SRS +NR A LL
Sbjct: 238 VVQCQTSRSQHQNRAEAYSLL 258
>gi|56416847|ref|YP_153921.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
gi|56388079|gb|AAV86666.1| peptide chain release factor 2 [Anaplasma marginale str. St.
Maries]
Length = 338
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 47/81 (58%), Gaps = 1/81 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS D + +I EKD++ R SG GGQ V KT + V +TH+P+GI
Sbjct: 179 RRHTSFASVEVSPIADDKIDI-EILEKDLRIDTYRASGAGGQHVNKTESAVRITHMPSGI 237
Query: 65 VIKCHQSRSLSENRKTARELL 85
V++C SRS +NR A LL
Sbjct: 238 VVQCQTSRSQHQNRAEAYSLL 258
>gi|422325053|ref|ZP_16406090.1| peptide chain release factor 1 [Rothia mucilaginosa M508]
gi|353343762|gb|EHB88077.1| peptide chain release factor 1 [Rothia mucilaginosa M508]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L ++D + +I++ D++ R SGPGGQ+V T++ V +TH+PTGI
Sbjct: 194 RIHTSAAGVLVFP-EVDEPEEIEINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGI 252
Query: 65 VIKCHQSRSLSENRKTA----RELLVAQWDVQVNGEDSLN--AQIRRIDEKRR 111
V+ +S +NR+ A R L+A Q++ E++ + +Q+R +D R
Sbjct: 253 VVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRTMDRSER 305
>gi|227499885|ref|ZP_03929978.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
gi|227217994|gb|EEI83267.1| peptide chain release factor RF2 [Anaerococcus tetradius ATCC
35098]
Length = 333
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F + LD + ID D++ R SG GGQ V KT++ V +THIPTG
Sbjct: 178 RRHTSFASVDVFPE--LDDNLEIDIDPSDLRIDTYRASGAGGQHVNKTDSAVRITHIPTG 235
Query: 64 IVIKCHQSRSLSENRKTARELLVAQWDVQVNGED 97
+V RS +N++TA LL+++ VQ+ E+
Sbjct: 236 VVATSQAERSQIQNKQTAMNLLMSKL-VQIKEEE 268
>gi|15827565|ref|NP_301828.1| peptide chain release factor 1 [Mycobacterium leprae TN]
gi|221230042|ref|YP_002503458.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
gi|13432207|sp|P45833.2|RF1_MYCLE RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790892|sp|B8ZR31.1|RF1_MYCLB RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13093115|emb|CAC31515.1| peptide chain release factor 1 [Mycobacterium leprae]
gi|219933149|emb|CAR71229.1| peptide chain release factor 1 [Mycobacterium leprae Br4923]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V IDE D++ R SG GGQ V T++ V +TH+PTG+
Sbjct: 200 RVHTSAAGVLVYPEPEEIGEV-HIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGV 258
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + NA QIR +D R
Sbjct: 259 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRTVDRSER 311
>gi|406998514|gb|EKE16445.1| hypothetical protein ACD_11C00017G0035 [uncultured bacterium]
Length = 331
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
KI+EKD++ R SG GGQ+V T++ V +THIPTG V+ C RS +N+++A ++L
Sbjct: 196 KIEEKDLRVDVYRSSGAGGQSVNTTDSAVRVTHIPTGTVVTCQNERSQLQNKESAMKILK 255
Query: 87 AQ 88
A+
Sbjct: 256 AK 257
>gi|319957316|ref|YP_004168579.1| peptide chain release factor 2 [Nitratifractor salsuginis DSM
16511]
gi|319419720|gb|ADV46830.1| bacterial peptide chain release factor 2 (bRF-2) [Nitratifractor
salsuginis DSM 16511]
Length = 372
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 49/84 (58%), Gaps = 7/84 (8%)
Query: 5 RRHLSLASSLFRKY---DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIP 61
+RH S S + D+D +I++KDI+ R SG GGQ V KT + + +THIP
Sbjct: 211 KRHTSFTSVMVSPEINDDIDI----EIEDKDIRIDTYRASGAGGQHVNKTESAIRITHIP 266
Query: 62 TGIVIKCHQSRSLSENRKTARELL 85
TGIV++C RS +N+ A ++L
Sbjct: 267 TGIVVQCQNDRSQHKNKAAAMKML 290
>gi|192358804|ref|YP_001982940.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
gi|190684969|gb|ACE82647.1| peptide chain release factor 2 [Cellvibrio japonicus Ueda107]
Length = 329
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S +F ++D + +I+ D++ R SG GGQ V KT++ + +THIP+GI
Sbjct: 176 RRHTSFCS-VFVSPEIDDNIEIEINPADLRIDTYRASGAGGQHVNKTDSAIRITHIPSGI 234
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V++C RS NR A ++L A
Sbjct: 235 VVQCQNERSQHANRDKAYKMLRA 257
>gi|385840722|ref|YP_005864046.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
gi|300214843|gb|ADJ79259.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
CECT 5713]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 254 VVSSQAQRSQFQNRATAENMLRAK 277
>gi|430761943|ref|YP_007217800.1| Peptide chain release factor 1 [Thioalkalivibrio nitratireducens
DSM 14787]
gi|430011567|gb|AGA34319.1| Peptide chain release factor 1 [Thioalkalivibrio nitratireducens
DSM 14787]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
+LD + P+I+ D++ R SG GGQ V +T++ V LTH+PTG+V++C RS +N+
Sbjct: 210 ELDEVERPEINPADLRIDTYRASGAGGQHVNRTDSAVRLTHLPTGMVVECQDERSQHKNK 269
Query: 79 KTARELLVA 87
A LL A
Sbjct: 270 ARAMNLLAA 278
>gi|418961684|ref|ZP_13513569.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
gi|380343779|gb|EIA32127.1| peptide chain release factor 2 [Lactobacillus salivarius SMXD51]
Length = 333
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 173 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 231
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ RS +NR TA +L A
Sbjct: 232 VVSSQAQRSQFQNRATAENMLRA 254
>gi|359769543|ref|ZP_09273301.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
gi|359313059|dbj|GAB26134.1| peptide chain release factor 2 [Gordonia polyisoprenivorans NBRC
16320]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|336396093|ref|ZP_08577492.1| peptide chain release factor 2 [Lactobacillus farciminis KCTC 3681]
Length = 330
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I++ D++ R SG GGQ + KT++ V +TH+PTGI
Sbjct: 172 RRHTSFASVDVMP-ELDDSIHVDINDDDLRVDVFRSSGAGGQHINKTSSAVRITHLPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR+TA +L A+
Sbjct: 231 VVSSQAQRSQLQNRETAMNMLKAK 254
>gi|126643323|ref|YP_001086307.1| peptide chain release factor 2 [Acinetobacter baumannii ATCC 17978]
Length = 278
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S S++F ++D + I+ D++ R SG GGQ + KT++ V LTHIPTGI
Sbjct: 130 RRHTSF-SAVFISPEVDDNIEIDINPSDVRTDTYRASGAGGQHINKTDSAVRLTHIPTGI 188
Query: 65 VIKCHQSRSLSENRKTA 81
V+ C RS NR A
Sbjct: 189 VVACQNQRSQHANRDHA 205
>gi|88704041|ref|ZP_01101756.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
gi|88701868|gb|EAQ98972.1| Peptide chain release factor 1 [Congregibacter litoralis KT71]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 42/64 (65%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ D++ R SG GGQ V KT++ V LTH+PTGIV++C RS +NR A LL
Sbjct: 218 EINKADLRVDTYRASGAGGQHVNKTDSAVRLTHLPTGIVVECQDERSQHKNRARAMSLLQ 277
Query: 87 AQWD 90
A+ D
Sbjct: 278 AKLD 281
>gi|397670128|ref|YP_006511663.1| peptide chain release factor 1 [Propionibacterium propionicum
F0230a]
gi|395140944|gb|AFN45051.1| peptide chain release factor 1 [Propionibacterium propionicum
F0230a]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 2/81 (2%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L D++ ++ +I E D++ R SGPGGQ V T++ V +TH+PTG+
Sbjct: 193 RIHTSAAGVLVSP-DIEPEEL-EISESDLRIDVFRASGPGGQGVNTTDSAVRITHLPTGV 250
Query: 65 VIKCHQSRSLSENRKTARELL 85
V+ C RS +NR+ A LL
Sbjct: 251 VVSCQNERSQLQNREQAMRLL 271
>gi|417809962|ref|ZP_12456643.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
gi|335350886|gb|EGM52382.1| peptide chain release factor 2 [Lactobacillus salivarius GJ-24]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 254 VVSSQAQRSQFQNRATAENMLRAK 277
>gi|116492233|ref|YP_803968.1| peptide chain release factor 2 [Pediococcus pentosaceus ATCC 25745]
gi|116102383|gb|ABJ67526.1| bacterial peptide chain release factor 2 (bRF-2) [Pediococcus
pentosaceus ATCC 25745]
Length = 343
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I++ D++ R SG GGQ + KT++ V +TH+PTGI
Sbjct: 183 RRHTSFASVDVMP-ELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGI 241
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 242 VVASQAERSQLQNRATAMSMLKAK 265
>gi|378718798|ref|YP_005283687.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
gi|375753501|gb|AFA74321.1| peptide chain release factor 2 [Gordonia polyisoprenivorans VH2]
Length = 371
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
IDE +++ R SGPGGQ+V T++ V LTH+PTGIV+ C +S +N+ +A +L A
Sbjct: 235 IDENELKVDVYRSSGPGGQSVNTTDSAVRLTHLPTGIVVTCQNEKSQLQNKASAMRVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|417788605|ref|ZP_12436288.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
gi|334308782|gb|EGL99768.1| peptide chain release factor 2 [Lactobacillus salivarius NIAS840]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 254 VVSSQAQRSQFQNRATAENMLRAK 277
>gi|422574352|ref|ZP_16649906.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
gi|314927458|gb|EFS91289.1| peptide chain release factor 1 [Propionibacterium acnes HL044PA1]
Length = 388
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 19 DLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENR 78
D+D ++V ID DI+ R SGPGGQ V T++ V LTH+PTGIV C RS +N+
Sbjct: 235 DVDETEV-DIDPADIRVDVYRSSGPGGQGVNTTDSAVRLTHLPTGIVASCQNERSQLQNK 293
Query: 79 KTARELLVAQ 88
A +L A+
Sbjct: 294 AEAMRMLRAK 303
>gi|699334|gb|AAA63095.1| prfA [Mycobacterium leprae]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V IDE D++ R SG GGQ V T++ V +TH+PTG+
Sbjct: 196 RVHTSAAGVLVYPEPEEIGEV-HIDESDLRIDVYRSSGKGGQGVNTTDSAVRITHLPTGV 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + NA QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALANASADRASQIRTVDRSER 307
>gi|255326261|ref|ZP_05367347.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
gi|283458332|ref|YP_003362953.1| protein chain release factor A [Rothia mucilaginosa DY-18]
gi|255296715|gb|EET76046.1| peptide chain release factor 1 [Rothia mucilaginosa ATCC 25296]
gi|283134368|dbj|BAI65133.1| protein chain release factor A [Rothia mucilaginosa DY-18]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 64/113 (56%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L ++D + +I++ D++ R SGPGGQ+V T++ V +TH+PTGI
Sbjct: 194 RIHTSAAGVLVFP-EVDEPEEIEINQNDLKIDVYRSSGPGGQSVNTTDSAVRITHLPTGI 252
Query: 65 VIKCHQSRSLSENRKTA----RELLVAQWDVQVNGEDSLN--AQIRRIDEKRR 111
V+ +S +NR+ A R L+A Q++ E++ + +Q+R +D R
Sbjct: 253 VVAMQNEKSQLQNREAAMRVLRARLLAHQQEQIDAENAAHRASQVRTMDRSER 305
>gi|433626400|ref|YP_007260029.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140060008]
gi|432154006|emb|CCK51233.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140060008]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVGQV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|453362485|dbj|GAC81610.1| peptide chain release factor 1 [Gordonia malaquae NBRC 108250]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + ++V +IDE D++ R SG GGQ V T++ V LTH+PTG+
Sbjct: 197 RIHTSAAGVLIYPEPDEVAEV-QIDESDLRVDVYRSSGKGGQGVNTTDSAVRLTHLPTGV 255
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS +N+ A ++L A
Sbjct: 256 VVTCQNERSQLQNKARAMQVLAA 278
>gi|433641453|ref|YP_007287212.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070008]
gi|432158001|emb|CCK55284.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070008]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVGQV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|410944463|ref|ZP_11376204.1| peptide chain release factor 2 [Gluconobacter frateurii NBRC
101659]
Length = 322
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RR S AS +D S +I++ D++ R SG GGQ V KT++ + +THIPTGI
Sbjct: 156 RRQTSFASVWVYPV-VDDSIEVEINDSDLRVDTFRASGAGGQHVNKTDSAIRITHIPTGI 214
Query: 65 VIKCHQSRSLSENRKTARELLVA 87
V+ C RS NR A E+L A
Sbjct: 215 VVACQTDRSQHRNRAKAMEMLRA 237
>gi|227891182|ref|ZP_04008987.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
gi|227867056|gb|EEJ74477.1| peptide chain release factor 2 [Lactobacillus salivarius ATCC
11741]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 254 VVSSQAQRSQFQNRATAENMLRAK 277
>gi|90962160|ref|YP_536076.1| peptide chain release factor 2 [Lactobacillus salivarius UCC118]
gi|301301257|ref|ZP_07207412.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|90821354|gb|ABD99993.1| Bacterial Peptide Chain Release Factor 2 [Lactobacillus salivarius
UCC118]
gi|300851133|gb|EFK78862.1| peptide chain release factor 2 [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 355
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 48/84 (57%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S ++ +DI+ R SG GGQ + KT++ V L HIPTGI
Sbjct: 195 RRHTSFASVNVMP-ELDDSVEVELRPEDIKMEVFRASGAGGQHINKTSSAVRLIHIPTGI 253
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 254 VVSSQAQRSQFQNRATAENMLRAK 277
>gi|384101336|ref|ZP_10002375.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|419964746|ref|ZP_14480699.1| peptide chain release factor 2 [Rhodococcus opacus M213]
gi|383840890|gb|EID80185.1| peptide chain release factor 2 [Rhodococcus imtechensis RKJ300]
gi|414569858|gb|EKT80598.1| peptide chain release factor 2 [Rhodococcus opacus M213]
Length = 368
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|421895161|ref|ZP_16325636.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
gi|385271930|emb|CCG91008.1| peptide chain release factor 2 [Pediococcus pentosaceus IE-3]
Length = 332
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 49/84 (58%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +LD S I++ D++ R SG GGQ + KT++ V +TH+PTGI
Sbjct: 172 RRHTSFASVDVMP-ELDDSVEVNINQDDLRVDVYRSSGAGGQHINKTSSAVRITHLPTGI 230
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ RS +NR TA +L A+
Sbjct: 231 VVASQAERSQLQNRATAMSMLKAK 254
>gi|326330854|ref|ZP_08197155.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
gi|325951384|gb|EGD43423.1| peptide chain release factor 2 [Nocardioidaceae bacterium Broad-1]
Length = 372
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 36/55 (65%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTA 81
+IDE DI+ R SGPGGQ+V T++ V LTHIPTG V+ C +S +N+ A
Sbjct: 232 EIDENDIKVDVYRSSGPGGQSVNTTDSAVRLTHIPTGTVVSCQNEKSQLQNKAAA 286
>gi|94309981|ref|YP_583191.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
gi|93353833|gb|ABF07922.1| peptide chain release factor RF-2 [Cupriavidus metallidurans CH34]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 205 RHTSF-SSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHMPTGIV 263
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 264 VQCQNDRSQHRNRAEAMSML 283
>gi|334564797|ref|ZP_08517788.1| peptide chain release factor 1 [Corynebacterium bovis DSM 20582]
Length = 360
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+KDI+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 219 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLA 278
Query: 87 A 87
A
Sbjct: 279 A 279
>gi|15608439|ref|NP_215815.1| Probable peptide chain release factor 1 PrfA (RF-1) [Mycobacterium
tuberculosis H37Rv]
gi|15840749|ref|NP_335786.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
gi|31792492|ref|NP_854985.1| peptide chain release factor 1 [Mycobacterium bovis AF2122/97]
gi|121637228|ref|YP_977451.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|148661087|ref|YP_001282610.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|148822517|ref|YP_001287271.1| peptide chain release factor 1 [Mycobacterium tuberculosis F11]
gi|167969626|ref|ZP_02551903.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|224989703|ref|YP_002644390.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253799655|ref|YP_003032656.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
1435]
gi|254231557|ref|ZP_04924884.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
gi|254364196|ref|ZP_04980242.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
str. Haarlem]
gi|254550307|ref|ZP_05140754.1| peptide chain release factor 1 [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|289442738|ref|ZP_06432482.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
gi|289446894|ref|ZP_06436638.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CPHL_A]
gi|289569311|ref|ZP_06449538.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T17]
gi|289573962|ref|ZP_06454189.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
K85]
gi|289745045|ref|ZP_06504423.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
gi|289749853|ref|ZP_06509231.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T92]
gi|289753376|ref|ZP_06512754.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
gi|289757399|ref|ZP_06516777.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
gi|289761454|ref|ZP_06520832.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
1503]
gi|297633851|ref|ZP_06951631.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
4207]
gi|297730838|ref|ZP_06959956.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
R506]
gi|298524803|ref|ZP_07012212.1| peptide chain release factor 1 [Mycobacterium tuberculosis
94_M4241A]
gi|306775471|ref|ZP_07413808.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu001]
gi|306781618|ref|ZP_07419955.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu002]
gi|306784023|ref|ZP_07422345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu003]
gi|306788386|ref|ZP_07426708.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu004]
gi|306792713|ref|ZP_07431015.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu005]
gi|306797119|ref|ZP_07435421.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu006]
gi|306802999|ref|ZP_07439667.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu008]
gi|306807189|ref|ZP_07443857.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu007]
gi|306967388|ref|ZP_07480049.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu009]
gi|306971580|ref|ZP_07484241.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu010]
gi|307079294|ref|ZP_07488464.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu011]
gi|307083863|ref|ZP_07492976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu012]
gi|313658170|ref|ZP_07815050.1| peptide chain release factor 1 [Mycobacterium tuberculosis KZN
V2475]
gi|339631367|ref|YP_004723009.1| peptide chain release factor 1 [Mycobacterium africanum GM041182]
gi|340626315|ref|YP_004744767.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
canettii CIPT 140010059]
gi|375296896|ref|YP_005101163.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
4207]
gi|378771062|ref|YP_005170795.1| peptide chain release factor 1 [Mycobacterium bovis BCG str.
Mexico]
gi|385990727|ref|YP_005909025.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5180]
gi|385994326|ref|YP_005912624.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5079]
gi|385998083|ref|YP_005916381.1| peptide chain release factor 1 [Mycobacterium tuberculosis CTRI-2]
gi|386004288|ref|YP_005922567.1| peptide chain release factor 1 [Mycobacterium tuberculosis RGTB423]
gi|392385994|ref|YP_005307623.1| prfA [Mycobacterium tuberculosis UT205]
gi|392433106|ref|YP_006474150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
605]
gi|397673141|ref|YP_006514676.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
gi|422812283|ref|ZP_16860671.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CDC1551A]
gi|424803645|ref|ZP_18229076.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
W-148]
gi|424947040|ref|ZP_18362736.1| peptide chain release factor 1 [Mycobacterium tuberculosis
NCGM2209]
gi|449063370|ref|YP_007430453.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Korea
1168P]
gi|54039048|sp|P66017.1|RF1_MYCBO RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|54041593|sp|P66016.1|RF1_MYCTU RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223571|sp|A1KI87.1|RF1_MYCBP RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|166223574|sp|A5U1Z8.1|RF1_MYCTA RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|254790891|sp|C1AMU3.1|RF1_MYCBT RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|13880941|gb|AAK45600.1| peptide chain release factor 1 [Mycobacterium tuberculosis CDC1551]
gi|31618081|emb|CAD94192.1| PROBABLE PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
bovis AF2122/97]
gi|121492875|emb|CAL71346.1| Probable peptide chain release factor 1 prfA [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|124600616|gb|EAY59626.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis C]
gi|134149710|gb|EBA41755.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
str. Haarlem]
gi|148505239|gb|ABQ73048.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Ra]
gi|148721044|gb|ABR05669.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
F11]
gi|224772816|dbj|BAH25622.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Tokyo
172]
gi|253321158|gb|ACT25761.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
1435]
gi|289415657|gb|EFD12897.1| peptide chain release factor 1 [Mycobacterium tuberculosis T46]
gi|289419852|gb|EFD17053.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CPHL_A]
gi|289538393|gb|EFD42971.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
K85]
gi|289543065|gb|EFD46713.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T17]
gi|289685573|gb|EFD53061.1| peptide chain release factor 1 [Mycobacterium tuberculosis 02_1987]
gi|289690440|gb|EFD57869.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
T92]
gi|289693963|gb|EFD61392.1| peptide chain release factor 1 [Mycobacterium tuberculosis EAS054]
gi|289708960|gb|EFD72976.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis GM
1503]
gi|289712963|gb|EFD76975.1| peptide chain release factor 1 [Mycobacterium tuberculosis T85]
gi|298494597|gb|EFI29891.1| peptide chain release factor 1 [Mycobacterium tuberculosis
94_M4241A]
gi|308216019|gb|EFO75418.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu001]
gi|308325580|gb|EFP14431.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu002]
gi|308331256|gb|EFP20107.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu003]
gi|308335072|gb|EFP23923.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu004]
gi|308338880|gb|EFP27731.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu005]
gi|308342494|gb|EFP31345.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu006]
gi|308346428|gb|EFP35279.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu007]
gi|308350299|gb|EFP39150.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu008]
gi|308355000|gb|EFP43851.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu009]
gi|308358948|gb|EFP47799.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu010]
gi|308362830|gb|EFP51681.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu011]
gi|308366496|gb|EFP55347.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
SUMu012]
gi|323720256|gb|EGB29355.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
CDC1551A]
gi|326902921|gb|EGE49854.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis
W-148]
gi|328459401|gb|AEB04824.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
4207]
gi|339294280|gb|AEJ46391.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5079]
gi|339297920|gb|AEJ50030.1| peptide chain release factor 1 [Mycobacterium tuberculosis
CCDC5180]
gi|339330723|emb|CCC26393.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
africanum GM041182]
gi|340004505|emb|CCC43648.1| putative peptide chain release factor 1 PRFA (RF-1) [Mycobacterium
canettii CIPT 140010059]
gi|341601246|emb|CCC63919.1| probable peptide chain release factor 1 prfA [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344219129|gb|AEM99759.1| peptide chain release factor 1 [Mycobacterium tuberculosis CTRI-2]
gi|356593383|gb|AET18612.1| Peptide chain release factor 1 [Mycobacterium bovis BCG str.
Mexico]
gi|358231555|dbj|GAA45047.1| peptide chain release factor 1 [Mycobacterium tuberculosis
NCGM2209]
gi|378544545|emb|CCE36819.1| prfA [Mycobacterium tuberculosis UT205]
gi|379027521|dbj|BAL65254.1| peptide chain release factor 1 [Mycobacterium tuberculosis str.
Erdman = ATCC 35801]
gi|380724776|gb|AFE12571.1| peptide chain release factor 1 [Mycobacterium tuberculosis RGTB423]
gi|392054515|gb|AFM50073.1| peptide chain release factor 1 prfA [Mycobacterium tuberculosis KZN
605]
gi|395138046|gb|AFN49205.1| peptide chain release factor 1 [Mycobacterium tuberculosis H37Rv]
gi|440580775|emb|CCG11178.1| putative PEPTIDE CHAIN RELEASE FACTOR 1 PRFA (RF-1) [Mycobacterium
tuberculosis 7199-99]
gi|444894800|emb|CCP44056.1| Probable peptide chain release factor 1 PrfA (RF-1) [Mycobacterium
tuberculosis H37Rv]
gi|449031878|gb|AGE67305.1| peptide chain release factor 1 [Mycobacterium bovis BCG str. Korea
1168P]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVGQV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|429729535|ref|ZP_19264194.1| peptide chain release factor 1 [Corynebacterium durum F0235]
gi|429149559|gb|EKX92537.1| peptide chain release factor 1 [Corynebacterium durum F0235]
Length = 357
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+KDI+ R SG GGQ V T++ V +TH+PTGIV+ C + RS +N+ A ++L
Sbjct: 217 EIDDKDIRVDVYRSSGKGGQGVNTTDSAVRITHLPTGIVVTCQKERSQIQNKARAMQVLA 276
Query: 87 A 87
A
Sbjct: 277 A 277
>gi|392383093|ref|YP_005032290.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
gi|356878058|emb|CCC98920.1| peptide chain release factor 2 (RF-2) [Azospirillum brasilense
Sp245]
Length = 319
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/61 (47%), Positives = 41/61 (67%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I+EKD + R SG GGQ V KT++ + +TH+PTGIV+ C Q RS +NR A ++L
Sbjct: 177 EINEKDCRIDTFRASGAGGQHVNKTDSAIRITHLPTGIVVACQQERSQHKNRAKAWDMLR 236
Query: 87 A 87
A
Sbjct: 237 A 237
>gi|117926919|ref|YP_867536.1| peptide chain release factor 1 [Magnetococcus marinus MC-1]
gi|226739111|sp|A0LDT7.1|RF1_MAGSM RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|117610675|gb|ABK46130.1| bacterial peptide chain release factor 1 (bRF-1) [Magnetococcus
marinus MC-1]
Length = 361
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
I++KD++ R SGPGGQ+V T++ V +TH+PTG+V+ C +S +N+ A ++L A
Sbjct: 218 IEDKDLRIDVYRSSGPGGQSVNTTDSAVRITHLPTGLVVICQDEKSQHKNKAKAMKVLQA 277
Query: 88 Q-WDVQVNGEDSLNAQIRR 105
+ D Q DS A+ R+
Sbjct: 278 RLLDAQQQAADSQRAEARK 296
>gi|348029556|ref|YP_004872242.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
gi|347946899|gb|AEP30249.1| protein chain release factor A [Glaciecola nitratireducens FR1064]
Length = 362
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 14/98 (14%)
Query: 23 SKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTAR 82
S+ +I+ D++ R SG GGQ V KT++ + LTHIPTG+V++C RS +NR A
Sbjct: 214 SQAIEINPADLRVDTFRASGAGGQHVNKTDSAIRLTHIPTGVVVECQDERSQHKNRAKAM 273
Query: 83 ELLVAQWDVQVNGEDSLNAQIRRIDEKRRATQEQKKRK 120
+ L A++ +I+E +R +E RK
Sbjct: 274 SV--------------LQARLNKIEEDKRNAEEASTRK 297
>gi|433630415|ref|YP_007264043.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070010]
gi|432162008|emb|CCK59369.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070010]
Length = 357
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVGEV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|296140715|ref|YP_003647958.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
gi|296028849|gb|ADG79619.1| peptide chain release factor 2 [Tsukamurella paurometabola DSM
20162]
Length = 371
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
+DE +++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ A ++L A
Sbjct: 235 VDENEVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVAAMKVLQA 294
Query: 88 Q 88
+
Sbjct: 295 K 295
>gi|410447428|ref|ZP_11301524.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
gi|409979703|gb|EKO36461.1| peptide chain release factor 1 [SAR86 cluster bacterium SAR86E]
Length = 362
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 42/63 (66%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+ID+ +++ R SG GGQ V KT++ V LTHIPTG+V++C RS +N+ A LLV
Sbjct: 219 EIDKSELRVDTYRASGAGGQHVNKTDSAVRLTHIPTGVVVECQDDRSQHKNKAKAMALLV 278
Query: 87 AQW 89
A+
Sbjct: 279 AKL 281
>gi|289208167|ref|YP_003460233.1| hypothetical protein TK90_0982 [Thioalkalivibrio sp. K90mix]
gi|288943798|gb|ADC71497.1| conserved hypothetical protein [Thioalkalivibrio sp. K90mix]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S AS +F ++D S +I+ D++ R SG GGQ V +T + + +TH P+GI
Sbjct: 211 RRHTSFAS-VFASPEVDDSFEIEINPADLRVDTYRASGAGGQHVNRTESAIRITHEPSGI 269
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V+ C RS +NR TA + L A+
Sbjct: 270 VVACQNDRSQHKNRDTAMKQLKAK 293
>gi|226739120|sp|B8CQV2.1|RF1_SHEPW RecName: Full=Peptide chain release factor 1; Short=RF-1
gi|212558114|gb|ACJ30568.1| Peptide chain release factor 1 [Shewanella piezotolerans WP3]
Length = 361
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 56/96 (58%), Gaps = 15/96 (15%)
Query: 27 KIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLV 86
+I++ D++ R SG GGQ V KT++ + +THIPTGIV++C RS +NR A +
Sbjct: 218 EINKADLKVDTFRASGAGGQHVNKTDSAIRITHIPTGIVVECQDQRSQHKNRAQAMSV-- 275
Query: 87 AQWDVQVNGEDSLNAQIRRI-DEKRRATQEQKKRKL 121
L+A+I+ + DEKRR+ ++ +R L
Sbjct: 276 ------------LSARIQAVEDEKRRSEEDSTRRNL 299
>gi|254251975|ref|ZP_04945293.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
gi|124894584|gb|EAY68464.1| peptide chain release factor 2 [Burkholderia dolosa AUO158]
Length = 248
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 96 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRAEAMAML 174
>gi|389874937|ref|YP_006374293.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
gi|388532117|gb|AFK57311.1| peptide chain release factor RF-2 [Tistrella mobilis KA081020-065]
Length = 321
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 45/68 (66%)
Query: 20 LDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRK 79
+D S +I +KD++ R SG GGQ V +T++ + +TH+PTGIV++C Q RS +NR
Sbjct: 170 IDDSIDIEILDKDLRIDTYRASGAGGQHVNRTDSAIRITHVPTGIVVQCQQDRSQHKNRA 229
Query: 80 TARELLVA 87
TA +L A
Sbjct: 230 TAMGMLKA 237
>gi|268679078|ref|YP_003303509.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
6946]
gi|268617109|gb|ACZ11474.1| peptide chain release factor 2 [Sulfurospirillum deleyianum DSM
6946]
Length = 364
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 5 RRHLSLASSLFR-KYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
+RH S +S + + D D V ++++D++ R SG GGQ V KT++ + +TH+PTG
Sbjct: 211 KRHTSFSSVMVSPEVDDDIDIV--LEDRDLKVDTYRASGAGGQHVNKTDSAIRITHMPTG 268
Query: 64 IVIKCHQSRSLSENRKTARELL 85
IV++C RS +NR +A ++L
Sbjct: 269 IVVQCQNDRSQHKNRASAMKML 290
>gi|76810558|ref|YP_334108.1| peptide chain release factor 2 [Burkholderia pseudomallei 1710b]
gi|121600418|ref|YP_993518.1| peptide chain release factor 2 [Burkholderia mallei SAVP1]
gi|124383704|ref|YP_001029053.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10229]
gi|126449475|ref|YP_001081026.1| peptide chain release factor 2 [Burkholderia mallei NCTC 10247]
gi|134278044|ref|ZP_01764759.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
gi|167720343|ref|ZP_02403579.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei DM98]
gi|167739335|ref|ZP_02412109.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei 14]
gi|167816549|ref|ZP_02448229.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei 91]
gi|167824945|ref|ZP_02456416.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei 9]
gi|167846462|ref|ZP_02471970.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei B7210]
gi|167895040|ref|ZP_02482442.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei 7894]
gi|167903426|ref|ZP_02490631.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei NCTC 13177]
gi|167911676|ref|ZP_02498767.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei 112]
gi|167919676|ref|ZP_02506767.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei BCC215]
gi|254177740|ref|ZP_04884395.1| peptide chain release factor 2, programmed [Burkholderia mallei
ATCC 10399]
gi|254195760|ref|ZP_04902186.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
gi|254357976|ref|ZP_04974249.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
gi|386861149|ref|YP_006274098.1| peptide chain release factor 2 [Burkholderia pseudomallei 1026b]
gi|403519323|ref|YP_006653457.1| peptide chain release factor 2 [Burkholderia pseudomallei BPC006]
gi|418382578|ref|ZP_12966526.1| peptide chain release factor 2 [Burkholderia pseudomallei 354a]
gi|418533583|ref|ZP_13099445.1| peptide chain release factor 2 [Burkholderia pseudomallei 1026a]
gi|418544762|ref|ZP_13110034.1| peptide chain release factor 2 [Burkholderia pseudomallei 1258a]
gi|418551755|ref|ZP_13116660.1| peptide chain release factor 2 [Burkholderia pseudomallei 1258b]
gi|418552910|ref|ZP_13117753.1| peptide chain release factor 2 [Burkholderia pseudomallei 354e]
gi|76580011|gb|ABA49486.1| peptide chain release factor 2, programmed frameshift [Burkholderia
pseudomallei 1710b]
gi|121229228|gb|ABM51746.1| peptide chain release factor 2, programmed [Burkholderia mallei
SAVP1]
gi|134251694|gb|EBA51773.1| peptide chain release factor 2 [Burkholderia pseudomallei 305]
gi|148027103|gb|EDK85124.1| peptide chain release factor 2 [Burkholderia mallei 2002721280]
gi|160698779|gb|EDP88749.1| peptide chain release factor 2, programmed [Burkholderia mallei
ATCC 10399]
gi|169652505|gb|EDS85198.1| peptide chain release factor 2 [Burkholderia pseudomallei S13]
gi|385346828|gb|EIF53501.1| peptide chain release factor 2 [Burkholderia pseudomallei 1258b]
gi|385348056|gb|EIF54695.1| peptide chain release factor 2 [Burkholderia pseudomallei 1258a]
gi|385360866|gb|EIF66770.1| peptide chain release factor 2 [Burkholderia pseudomallei 1026a]
gi|385372319|gb|EIF77437.1| peptide chain release factor 2 [Burkholderia pseudomallei 354e]
gi|385377218|gb|EIF81824.1| peptide chain release factor 2 [Burkholderia pseudomallei 354a]
gi|385658277|gb|AFI65700.1| peptide chain release factor 2 [Burkholderia pseudomallei 1026b]
gi|403074966|gb|AFR16546.1| peptide chain release factor 2, programmed [Burkholderia
pseudomallei BPC006]
Length = 248
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 96 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRAEAMAML 174
>gi|432343023|ref|ZP_19592235.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
gi|430771944|gb|ELB87760.1| peptide chain release factor 2 [Rhodococcus wratislaviensis IFP
2016]
Length = 368
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|225847994|ref|YP_002728157.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
gi|225644274|gb|ACN99324.1| peptide chain release factor 2 [Sulfurihydrogenibium azorense
Az-Fu1]
Length = 370
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 50/92 (54%), Gaps = 17/92 (18%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEK--------DIQERFVRGSGPGGQAVAKTNNCVV 56
RRH S A+ S +P+IDE+ D++ R SG GGQ V KT++ V
Sbjct: 211 RRHTSFAA---------VSVIPEIDEEIKVEINEEDLRIDTFRASGAGGQHVNKTDSAVR 261
Query: 57 LTHIPTGIVIKCHQSRSLSENRKTARELLVAQ 88
+THIPTGIV+ C RS +N+ A +L A+
Sbjct: 262 ITHIPTGIVVACQSERSQLQNKLKALNMLKAK 293
>gi|161524328|ref|YP_001579340.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
17616]
gi|189350916|ref|YP_001946544.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
17616]
gi|421468821|ref|ZP_15917333.1| putative peptide chain release factor 2 [Burkholderia multivorans
ATCC BAA-247]
gi|421474655|ref|ZP_15922675.1| putative peptide chain release factor 2 [Burkholderia multivorans
CF2]
gi|160341757|gb|ABX14843.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
17616]
gi|189334938|dbj|BAG44008.1| peptide chain release factor 2 [Burkholderia multivorans ATCC
17616]
gi|400231096|gb|EJO60815.1| putative peptide chain release factor 2 [Burkholderia multivorans
ATCC BAA-247]
gi|400231734|gb|EJO61407.1| putative peptide chain release factor 2 [Burkholderia multivorans
CF2]
Length = 248
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +I+ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 96 RHTSF-SSVFVYPEIDDSIEVEINPADLRIDTYRASGAGGQHINKTDSAVRITHMPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRAEAMAML 174
>gi|433634363|ref|YP_007267990.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070017]
gi|432165956|emb|CCK63443.1| Peptide chain release factor RF-1 [Mycobacterium canettii CIPT
140070017]
Length = 357
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
R H S A L + +V +IDE D++ R SG GGQ V T++ V +TH+PTGI
Sbjct: 196 RVHTSAAGVLVYPEPEEVGEV-QIDESDLRIDVFRSSGKGGQGVNTTDSAVRITHLPTGI 254
Query: 65 VIKCHQSRSLSENRKTARELLVAQWDVQVNGEDSLNA------QIRRIDEKRR 111
V+ C RS +N+ A ++L A+ + +A QIR +D R
Sbjct: 255 VVTCQNERSQLQNKTRALQVLAARLQAMAEEQALADASADRASQIRTVDRSER 307
>gi|350565918|ref|ZP_08934640.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
gi|348663296|gb|EGY79887.1| peptide chain release factor RF2 [Peptoniphilus indolicus ATCC
29427]
Length = 348
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 5 RRHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGI 64
RRH S SS+ +D + +I +D++ R SG GGQ V T++ V +THIPTGI
Sbjct: 191 RRHTSF-SSVDVYPQIDGAVEVEIRAEDLKVDTYRSSGAGGQHVNTTDSAVRITHIPTGI 249
Query: 65 VIKCHQSRSLSENRKTARELLVAQ 88
V++C RS +NR+TA +L A+
Sbjct: 250 VVQCQNERSQIQNRETAMNMLKAK 273
>gi|226365870|ref|YP_002783653.1| peptide chain release factor 2 [Rhodococcus opacus B4]
gi|254790919|sp|C1B1L3.1|RF2_RHOOB RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|226244360|dbj|BAH54708.1| peptide chain release factor 2 [Rhodococcus opacus B4]
Length = 368
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|111023366|ref|YP_706338.1| peptide chain release factor 2 [Rhodococcus jostii RHA1]
gi|397736801|ref|ZP_10503479.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
gi|123339715|sp|Q0S2Q6.1|RF2_RHOSR RecName: Full=Peptide chain release factor 2; Short=RF-2
gi|110822896|gb|ABG98180.1| peptide chain release factor RF2 [Rhodococcus jostii RHA1]
gi|396927382|gb|EJI94613.1| peptide chain release factor 2 [Rhodococcus sp. JVH1]
Length = 368
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 41/61 (67%)
Query: 28 IDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIVIKCHQSRSLSENRKTARELLVA 87
++E D++ R SGPGGQ+V T++ V LTHIPTGIV+ C +S +N+ +A +L A
Sbjct: 231 VNENDVRVDVYRSSGPGGQSVNTTDSAVRLTHIPTGIVVTCQNEKSQLQNKVSAMRVLQA 290
Query: 88 Q 88
+
Sbjct: 291 K 291
>gi|430808889|ref|ZP_19436004.1| peptide chain release factor 2 [Cupriavidus sp. HMR-1]
gi|429498652|gb|EKZ97156.1| peptide chain release factor 2 [Cupriavidus sp. HMR-1]
Length = 248
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Query: 6 RHLSLASSLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTGIV 65
RH S SS+F ++D S +++ D++ R SG GGQ + KT++ V +TH+PTGIV
Sbjct: 96 RHTSF-SSVFVYPEVDDSFEVEVNPADLRVDTYRASGAGGQHINKTDSAVRITHMPTGIV 154
Query: 66 IKCHQSRSLSENRKTARELL 85
++C RS NR A +L
Sbjct: 155 VQCQNDRSQHRNRAEAMSML 174
>gi|407472789|ref|YP_006787189.1| peptide chain release factor PrfB [Clostridium acidurici 9a]
gi|407049297|gb|AFS77342.1| peptide chain release factor PrfB [Clostridium acidurici 9a]
Length = 328
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 5 RRHLSLAS-SLFRKYDLDYSKVPKIDEKDIQERFVRGSGPGGQAVAKTNNCVVLTHIPTG 63
RRH S AS +F +LD + I+ D++ R G GGQ V T++ + +THIPTG
Sbjct: 171 RRHTSFASVDIFP--ELDENVEVDINPNDLRIDTYRSGGAGGQHVNTTDSAIRITHIPTG 228
Query: 64 IVIKCHQSRSLSENRKTARELLVAQ 88
+V++C RS N+ TA +L+A+
Sbjct: 229 VVVQCQNERSQHSNKATAMRMLMAK 253
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.132 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,988,530,736
Number of Sequences: 23463169
Number of extensions: 72767111
Number of successful extensions: 318568
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8187
Number of HSP's successfully gapped in prelim test: 280
Number of HSP's that attempted gapping in prelim test: 310025
Number of HSP's gapped (non-prelim): 8613
length of query: 135
length of database: 8,064,228,071
effective HSP length: 100
effective length of query: 35
effective length of database: 10,012,878,467
effective search space: 350450746345
effective search space used: 350450746345
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 71 (32.0 bits)