Your job contains 1 sequence.
>psy4485
MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGGW
WFESKSNLGNPSFYRSSDFYRNIYTFHNSVV
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy4485
(91 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E1BQ55 - symbol:SPRTN "Uncharacterized protein"... 149 8.3e-12 2
UNIPROTKB|E1BQ54 - symbol:SPRTN "Uncharacterized protein"... 149 2.9e-11 2
UNIPROTKB|A5D979 - symbol:SPRTN "SprT-like domain-contain... 158 1.1e-10 1
UNIPROTKB|D4AB73 - symbol:Sprtn "Protein RGD1559496" spec... 156 1.6e-10 1
FB|FBgn0030646 - symbol:CG9203 species:7227 "Drosophila m... 159 1.6e-10 1
UNIPROTKB|F1RGT1 - symbol:SPRTN "Uncharacterized protein"... 155 2.3e-10 1
RGD|1559496 - symbol:Sprtn "SprT-like N-terminal domain" ... 151 6.4e-10 1
UNIPROTKB|E2R5H3 - symbol:SPRTN "Uncharacterized protein"... 150 8.0e-10 1
MGI|MGI:2685351 - symbol:Sprtn "SprT-like N-terminal doma... 150 8.3e-10 1
UNIPROTKB|Q9H040 - symbol:SPRTN "SprT-like domain-contain... 149 1.0e-09 1
UNIPROTKB|F6UH96 - symbol:sprtn "SprT-like domain-contain... 135 2.8e-08 1
WB|WBGene00011834 - symbol:dvc-1 species:6239 "Caenorhabd... 124 3.2e-07 1
UNIPROTKB|Q22557 - symbol:dvc-1 "SprT-like domain-contain... 124 3.2e-07 1
>UNIPROTKB|E1BQ55 [details] [associations]
symbol:SPRTN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006642 SMART:SM00734
GO:GO:0003677 GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263
SMART:SM00731 GeneTree:ENSGT00390000003585 EMBL:AADN02035668
IPI:IPI00599566 Ensembl:ENSGALT00000018017 ArrayExpress:E1BQ55
Uniprot:E1BQ55
Length = 355
Score = 149 (57.5 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+S+ D WE++DP+PD+HGLFV F + F RL +VEV WS RMT A V G+GG
Sbjct: 39 LSVVDEAWELLDPSPDVHGLFVQFNEALFWGRLAAVEVSWSPRMTLCAGVCKYK-GNGG 96
Score = 36 (17.7 bits), Expect = 8.3e-12, Sum P(2) = 8.3e-12
Identities = 5/10 (50%), Positives = 6/10 (60%)
Query: 60 WWFESKSNLG 69
WW E + N G
Sbjct: 207 WWAEHQENCG 216
>UNIPROTKB|E1BQ54 [details] [associations]
symbol:SPRTN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] InterPro:IPR006642 SMART:SM00734
GO:GO:0003677 GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263
SMART:SM00731 GeneTree:ENSGT00390000003585 EMBL:AADN02035668
IPI:IPI00570817 Ensembl:ENSGALT00000018018 OMA:PVCQTEV
ArrayExpress:E1BQ54 Uniprot:E1BQ54
Length = 491
Score = 149 (57.5 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 30/59 (50%), Positives = 39/59 (66%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+S+ D WE++DP+PD+HGLFV F + F RL +VEV WS RMT A V G+GG
Sbjct: 39 LSVVDEAWELLDPSPDVHGLFVQFNEALFWGRLAAVEVSWSPRMTLCAGVCKYK-GNGG 96
Score = 36 (17.7 bits), Expect = 2.9e-11, Sum P(2) = 2.9e-11
Identities = 5/10 (50%), Positives = 6/10 (60%)
Query: 60 WWFESKSNLG 69
WW E + N G
Sbjct: 207 WWAEHQENCG 216
>UNIPROTKB|A5D979 [details] [associations]
symbol:SPRTN "SprT-like domain-containing protein Spartan"
species:9913 "Bos taurus" [GO:0043130 "ubiquitin binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] [GO:0031398
"positive regulation of protein ubiquitination" evidence=ISS]
[GO:0019985 "translesion synthesis" evidence=ISS] [GO:0009411
"response to UV" evidence=ISS] [GO:0006974 "response to DNA damage
stimulus" evidence=ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006642 PROSITE:PS00142 SMART:SM00734 GO:GO:0005634
GO:GO:0005694 GO:GO:0009411 GO:GO:0046872 GO:GO:0003677
GO:GO:0016607 InterPro:IPR006640 Pfam:PF10263 SMART:SM00731
GO:GO:0031398 GO:GO:0019985 GO:GO:0070530 EMBL:BT030498
IPI:IPI00702301 RefSeq:NP_001091551.1 UniGene:Bt.45352 PRIDE:A5D979
Ensembl:ENSBTAT00000008030 GeneID:534918 KEGG:bta:534918 CTD:83932
eggNOG:NOG308710 GeneTree:ENSGT00390000003585 HOGENOM:HOG000031496
HOVERGEN:HBG101206 InParanoid:A5D979 OMA:GYVKRAT OrthoDB:EOG4PRSR9
NextBio:20876572 Uniprot:A5D979
Length = 487
Score = 158 (60.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 32/59 (54%), Positives = 41/59 (69%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ GLFV F RFF +L +VEVKWS RMT A + + G GG
Sbjct: 29 LSLVDASWELVDPTPDLQGLFVLFNDRFFWGQLEAVEVKWSVRMTLCAGICSYE-GRGG 86
>UNIPROTKB|D4AB73 [details] [associations]
symbol:Sprtn "Protein RGD1559496" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR006642 SMART:SM00734 RGD:1559496 GO:GO:0003677
GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263 SMART:SM00731
EMBL:CH474054 CTD:83932 GeneTree:ENSGT00390000003585
UniGene:Rn.144231 IPI:IPI00391933 RefSeq:NP_001099669.1
Ensembl:ENSRNOT00000038257 GeneID:292101 KEGG:rno:292101
UCSC:RGD:1559496 NextBio:633783 Uniprot:D4AB73
Length = 453
Score = 156 (60.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 37/92 (40%), Positives = 49/92 (53%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGGW 60
+SL D+ WE++DPTPD+ LF+ F RFF +L +VEVKWS RMT A + + G GG
Sbjct: 29 LSLVDASWELVDPTPDLQALFLQFNDRFFWGQLEAVEVKWSVRMTLCAGICTYE-GRGGM 87
Query: 61 WFESKSNLGNP--SFYRSSDFYRNIYTFHNSV 90
L P D +TFH+ V
Sbjct: 88 ---CSIRLSEPLLKLRPRKDLVEVYHTFHDEV 116
>FB|FBgn0030646 [details] [associations]
symbol:CG9203 species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] InterPro:IPR006642 SMART:SM00734 GO:GO:0003677
EMBL:AE014298 GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263
SMART:SM00731 GeneTree:ENSGT00390000003585 RefSeq:NP_573032.1
UniGene:Dm.17404 PRIDE:Q9VXU6 EnsemblMetazoa:FBtr0074074
GeneID:32480 KEGG:dme:Dmel_CG9203 UCSC:CG9203-RA
FlyBase:FBgn0030646 InParanoid:Q9VXU6 OMA:VAGTNIT OrthoDB:EOG4GB5P5
PhylomeDB:Q9VXU6 GenomeRNAi:32480 NextBio:778684
ArrayExpress:Q9VXU6 Uniprot:Q9VXU6
Length = 724
Score = 159 (61.0 bits), Expect = 1.6e-10, P = 1.6e-10
Identities = 26/48 (54%), Positives = 40/48 (83%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGA 48
M+L D +WE++DPTPDI+ +F+ F ++FFQ+RLG+V ++WSK+M S A
Sbjct: 108 MNLVDPEWELVDPTPDIYAMFIRFDEKFFQERLGAVSLEWSKKMYSCA 155
>UNIPROTKB|F1RGT1 [details] [associations]
symbol:SPRTN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070530 "K63-linked polyubiquitin binding"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006642 SMART:SM00734 GO:GO:0003677
GO:GO:0016607 GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263
SMART:SM00731 GeneTree:ENSGT00390000003585 OMA:GYVKRAT
EMBL:CU407164 Ensembl:ENSSSCT00000011139 Uniprot:F1RGT1
Length = 483
Score = 155 (59.6 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 31/59 (52%), Positives = 41/59 (69%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ LFV F RFF +L +VEVKWS RMT A + + G+GG
Sbjct: 29 LSLVDASWELVDPTPDLQALFVQFNDRFFWGKLEAVEVKWSVRMTLCAGICSYE-GNGG 86
>RGD|1559496 [details] [associations]
symbol:Sprtn "SprT-like N-terminal domain" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO;ISS]
[GO:0009411 "response to UV" evidence=IEA;ISO;ISS] [GO:0016607
"nuclear speck" evidence=IEA;ISO] [GO:0019985 "translesion
synthesis" evidence=IEA;ISO;ISS] [GO:0031398 "positive regulation
of protein ubiquitination" evidence=IEA;ISO;ISS] [GO:0043130
"ubiquitin binding" evidence=ISO;ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0070530 "K63-linked polyubiquitin
binding" evidence=IEA;ISO;ISS] InterPro:IPR006642 PROSITE:PS00142
SMART:SM00734 RGD:1559496 GO:GO:0005634 GO:GO:0005694 GO:GO:0009411
GO:GO:0046872 GO:GO:0003677 GO:GO:0016607 InterPro:IPR006640
Pfam:PF10263 SMART:SM00731 GO:GO:0031398 GO:GO:0019985
GO:GO:0070530 EMBL:CH474054 OrthoDB:EOG4PRSR9 IPI:IPI00359872
UniGene:Rn.144231 PRIDE:D3ZVU1 Ensembl:ENSRNOT00000038245
ArrayExpress:D3ZVU1 Uniprot:D3ZVU1
Length = 496
Score = 151 (58.2 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ LF+ F RFF +L +VEVKWS RMT A + + G GG
Sbjct: 29 LSLVDASWELVDPTPDLQALFLQFNDRFFWGQLEAVEVKWSVRMTLCAGICTYE-GRGG 86
>UNIPROTKB|E2R5H3 [details] [associations]
symbol:SPRTN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070530 "K63-linked polyubiquitin binding"
evidence=IEA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IEA] [GO:0019985 "translesion synthesis"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0009411
"response to UV" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR006642 SMART:SM00734 GO:GO:0003677
GO:GO:0016607 GO:GO:0006281 InterPro:IPR006640 Pfam:PF10263
SMART:SM00731 CTD:83932 GeneTree:ENSGT00390000003585 OMA:GYVKRAT
EMBL:AAEX03002707 RefSeq:XP_546090.2 Ensembl:ENSCAFT00000018713
GeneID:488972 KEGG:cfa:488972 NextBio:20862223 Uniprot:E2R5H3
Length = 487
Score = 150 (57.9 bits), Expect = 8.0e-10, P = 8.0e-10
Identities = 31/59 (52%), Positives = 40/59 (67%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ LFV F RFF +L +VEVKWS RMT A + + G GG
Sbjct: 29 LSLVDASWELVDPTPDLQALFVQFNDRFFWGQLEAVEVKWSLRMTLCAGLCSYE-GRGG 86
>MGI|MGI:2685351 [details] [associations]
symbol:Sprtn "SprT-like N-terminal domain" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=ISO] [GO:0005694
"chromosome" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0009411 "response to UV" evidence=ISO] [GO:0019985 "translesion
synthesis" evidence=ISO] [GO:0031398 "positive regulation of
protein ubiquitination" evidence=ISO] [GO:0043130 "ubiquitin
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0070530 "K63-linked polyubiquitin binding"
evidence=ISO] PROSITE:PS00142 MGI:MGI:2685351 GO:GO:0005634
GO:GO:0005694 GO:GO:0009411 GO:GO:0046872 GO:GO:0016607
InterPro:IPR006640 Pfam:PF10263 SMART:SM00731 GO:GO:0031398
EMBL:CH466525 GO:GO:0019985 GO:GO:0070530 CTD:83932
GeneTree:ENSGT00390000003585 OMA:GYVKRAT EMBL:AC139158
EMBL:BC158088 RefSeq:NP_001104611.1 UniGene:Mm.482915 PRIDE:G3X912
Ensembl:ENSMUST00000034467 GeneID:244666 KEGG:mmu:244666
NextBio:386365 Bgee:G3X912 Uniprot:G3X912
Length = 497
Score = 150 (57.9 bits), Expect = 8.3e-10, P = 8.3e-10
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ LF+ F RFF +L +VEVKWS RMT A + + G GG
Sbjct: 30 VSLVDASWELVDPTPDLQALFLQFNDRFFWGQLEAVEVKWSVRMTLCAGICTYE-GRGG 87
>UNIPROTKB|Q9H040 [details] [associations]
symbol:SPRTN "SprT-like domain-containing protein Spartan"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0009411 "response to UV" evidence=IDA]
[GO:0006974 "response to DNA damage stimulus" evidence=IDA]
[GO:0043130 "ubiquitin binding" evidence=IDA] [GO:0070530
"K63-linked polyubiquitin binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0031398 "positive regulation of protein
ubiquitination" evidence=IDA] [GO:0019985 "translesion synthesis"
evidence=IMP;IDA] [GO:0016607 "nuclear speck" evidence=IDA]
InterPro:IPR006642 PROSITE:PS00142 SMART:SM00734 GO:GO:0005694
GO:GO:0009411 GO:GO:0046872 GO:GO:0003677 GO:GO:0016607
EMBL:CH471098 InterPro:IPR006640 Pfam:PF10263 SMART:SM00731
GO:GO:0031398 GO:GO:0019985 EMBL:AL117352 GO:GO:0070530 CTD:83932
eggNOG:NOG308710 HOGENOM:HOG000031496 HOVERGEN:HBG101206
OMA:GYVKRAT EMBL:AY358611 EMBL:AK027613 EMBL:AL512744 EMBL:BC015740
EMBL:BC068478 IPI:IPI00552744 IPI:IPI00552963 RefSeq:NP_001010984.1
RefSeq:NP_114407.3 UniGene:Hs.554892 ProteinModelPortal:Q9H040
PhosphoSite:Q9H040 DMDM:162416221 PRIDE:Q9H040 DNASU:83932
Ensembl:ENST00000295050 Ensembl:ENST00000391858 GeneID:83932
KEGG:hsa:83932 UCSC:uc001hur.3 UCSC:uc001hus.3
GeneCards:GC01P231473 H-InvDB:HIX0001695 HGNC:HGNC:25356
HPA:HPA025073 neXtProt:NX_Q9H040 PharmGKB:PA142672442
InParanoid:Q9H040 PhylomeDB:Q9H040 GenomeRNAi:83932 NextBio:73047
ArrayExpress:Q9H040 Bgee:Q9H040 CleanEx:HS_C1orf124
Genevestigator:Q9H040 Uniprot:Q9H040
Length = 489
Score = 149 (57.5 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+SL D+ WE++DPTPD+ LFV F +FF +L +VEVKWS RMT A + + G GG
Sbjct: 29 LSLVDASWELVDPTPDLQALFVQFNDQFFWGQLEAVEVKWSVRMTLCAGICSYE-GKGG 86
>UNIPROTKB|F6UH96 [details] [associations]
symbol:sprtn "SprT-like domain-containing protein Spartan"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0009411 "response to UV" evidence=ISS]
[GO:0019985 "translesion synthesis" evidence=ISS] [GO:0031398
"positive regulation of protein ubiquitination" evidence=ISS]
[GO:0043130 "ubiquitin binding" evidence=ISS] [GO:0070530
"K63-linked polyubiquitin binding" evidence=ISS] PROSITE:PS00142
GO:GO:0005634 GO:GO:0005694 GO:GO:0009411 GO:GO:0046872
InterPro:IPR006640 Pfam:PF10263 SMART:SM00731 GO:GO:0031398
GO:GO:0019985 GO:GO:0070530 CTD:83932 EMBL:AAMC01116774
EMBL:BC155517 RefSeq:NP_001106631.1 UniGene:Str.11024
GeneID:100127870 KEGG:xtr:100127870 Xenbase:XB-GENE-5845785
Bgee:F6UH96 Uniprot:F6UH96
Length = 436
Score = 135 (52.6 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 1 MSLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDFGSGG 59
+S+ D WE++DP PDI LF+ F FF +L +EVKWS RMT A V + G GG
Sbjct: 3 LSVVDPTWELLDPNPDIRALFLEFNDTFFWGQLSGIEVKWSARMTLCAGVCSYE-GRGG 60
>WB|WBGene00011834 [details] [associations]
symbol:dvc-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] InterPro:IPR006642
PROSITE:PS00142 SMART:SM00734 GO:GO:0005634 GO:GO:0040007
GO:GO:0006915 GO:GO:0005694 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0006281 GO:GO:0048477 GO:GO:0006974
InterPro:IPR006640 Pfam:PF10263 SMART:SM00731 EMBL:Z74043
eggNOG:NOG308710 GeneTree:ENSGT00390000003585 HOGENOM:HOG000031496
PIR:T24974 RefSeq:NP_505853.1 UniGene:Cel.2277
ProteinModelPortal:Q22557 IntAct:Q22557 STRING:Q22557
EnsemblMetazoa:T19B10.6.1 EnsemblMetazoa:T19B10.6.2
EnsemblMetazoa:T19B10.6.3 GeneID:179554 KEGG:cel:CELE_T19B10.6
UCSC:T19B10.6.1 CTD:179554 WormBase:T19B10.6 InParanoid:Q22557
OMA:HRINQAG NextBio:905914 Uniprot:Q22557
Length = 368
Score = 124 (48.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 2 SLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDF--GSGG 59
SL D +E+ DP PDIH LF+ F RFF L EVKWS RM + A + + G GG
Sbjct: 5 SLVDPSFELSDPCPDIHALFIQFDARFFGGSLACCEVKWSPRMYACAGICSYEIRGGRGG 64
>UNIPROTKB|Q22557 [details] [associations]
symbol:dvc-1 "SprT-like domain-containing protein Spartan"
species:6239 "Caenorhabditis elegans" [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR006642 PROSITE:PS00142 SMART:SM00734 GO:GO:0005634
GO:GO:0040007 GO:GO:0006915 GO:GO:0005694 GO:GO:0002119
GO:GO:0046872 GO:GO:0003677 GO:GO:0006281 GO:GO:0048477
GO:GO:0006974 InterPro:IPR006640 Pfam:PF10263 SMART:SM00731
EMBL:Z74043 eggNOG:NOG308710 GeneTree:ENSGT00390000003585
HOGENOM:HOG000031496 PIR:T24974 RefSeq:NP_505853.1 UniGene:Cel.2277
ProteinModelPortal:Q22557 IntAct:Q22557 STRING:Q22557
EnsemblMetazoa:T19B10.6.1 EnsemblMetazoa:T19B10.6.2
EnsemblMetazoa:T19B10.6.3 GeneID:179554 KEGG:cel:CELE_T19B10.6
UCSC:T19B10.6.1 CTD:179554 WormBase:T19B10.6 InParanoid:Q22557
OMA:HRINQAG NextBio:905914 Uniprot:Q22557
Length = 368
Score = 124 (48.7 bits), Expect = 3.2e-07, P = 3.2e-07
Identities = 28/60 (46%), Positives = 34/60 (56%)
Query: 2 SLNDSQWEVIDPTPDIHGLFVAFAKRFFQDRLGSVEVKWSKRMTSGAVVSVVDF--GSGG 59
SL D +E+ DP PDIH LF+ F RFF L EVKWS RM + A + + G GG
Sbjct: 5 SLVDPSFELSDPCPDIHALFIQFDARFFGGSLACCEVKWSPRMYACAGICSYEIRGGRGG 64
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.438 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 91 91 0.00091 102 3 11 22 0.47 29
29 0.39 31
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 560 (60 KB)
Total size of DFA: 127 KB (2081 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 9.94u 0.20s 10.14t Elapsed: 00:00:01
Total cpu time: 9.94u 0.20s 10.14t Elapsed: 00:00:01
Start: Thu Aug 15 13:07:57 2013 End: Thu Aug 15 13:07:58 2013