BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4489
(72 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O08839|BIN1_RAT Myc box-dependent-interacting protein 1 OS=Rattus norvegicus
GN=Bin1 PE=1 SV=1
Length = 588
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
+ YT D DEL G+++ V+ + +PEEQ
Sbjct: 524 HDYTATDTDELQLKAGDVVLVIPFQNPEEQ 553
>sp|O08539|BIN1_MOUSE Myc box-dependent-interacting protein 1 OS=Mus musculus GN=Bin1
PE=1 SV=1
Length = 588
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
+ YT D DEL G+++ V+ + +PEEQ
Sbjct: 524 HDYTATDTDELQLKAGDVVLVIPFQNPEEQ 553
>sp|O00499|BIN1_HUMAN Myc box-dependent-interacting protein 1 OS=Homo sapiens GN=BIN1
PE=1 SV=1
Length = 593
Score = 34.7 bits (78), Expect = 0.20, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
+ YT D DEL G+++ V+ + +PEEQ
Sbjct: 529 HDYTATDTDELQLKAGDVVLVIPFQNPEEQ 558
>sp|O00160|MYO1F_HUMAN Unconventional myosin-If OS=Homo sapiens GN=MYO1F PE=1 SV=3
Length = 1098
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 14/27 (51%), Positives = 21/27 (77%), Gaps = 1/27 (3%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y+Y +DVDELSF+V E+I ++ +DP
Sbjct: 1050 YQYVGQDVDELSFNVNEVIEIL-MEDP 1075
>sp|Q15811|ITSN1_HUMAN Intersectin-1 OS=Homo sapiens GN=ITSN1 PE=1 SV=3
Length = 1721
Score = 33.9 bits (76), Expect = 0.27, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 21/28 (75%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y YT ++ DEL+F+ G+II V+ +DP+
Sbjct: 1164 YDYTAQNDDELAFNKGQIINVLNKEDPD 1191
>sp|Q9WVE9|ITSN1_RAT Intersectin-1 OS=Rattus norvegicus GN=Itsn1 PE=1 SV=1
Length = 1217
Score = 33.5 bits (75), Expect = 0.41, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y YT ++ DEL+F G+II V+ +DP+
Sbjct: 1161 YDYTAQNDDELAFSKGQIINVLSKEDPD 1188
>sp|Q9Z0R4|ITSN1_MOUSE Intersectin-1 OS=Mus musculus GN=Itsn1 PE=1 SV=2
Length = 1714
Score = 33.5 bits (75), Expect = 0.42, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y YT ++ DEL+F G+II V+ +DP+
Sbjct: 1157 YDYTAQNDDELAFSKGQIINVLNKEDPD 1184
>sp|Q9NZM3|ITSN2_HUMAN Intersectin-2 OS=Homo sapiens GN=ITSN2 PE=1 SV=3
Length = 1697
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + DELSF G++I V+ DDP+
Sbjct: 1136 YDYAANNEDELSFSKGQLINVMNKDDPD 1163
>sp|P70248|MYO1F_MOUSE Unconventional myosin-If OS=Mus musculus GN=Myo1f PE=1 SV=1
Length = 1099
Score = 32.7 bits (73), Expect = 0.69, Method: Composition-based stats.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYD 43
Y+Y +DVDELSF+V E+I ++ D
Sbjct: 1051 YQYIGQDVDELSFNVNEVIEILIED 1075
>sp|Q5I1X5|IASPP_MOUSE RelA-associated inhibitor OS=Mus musculus GN=Ppp1r13l PE=1 SV=1
Length = 824
Score = 32.0 bits (71), Expect = 1.0, Method: Composition-based stats.
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 14 LLYFTYKYTREDVDELSFDVGEIIRVVEYDDPEE 47
++Y + Y+ E DELSF GE + V+ D PEE
Sbjct: 758 VVYALWDYSAEFGDELSFREGESVTVLRRDGPEE 791
>sp|Q8WUF5|IASPP_HUMAN RelA-associated inhibitor OS=Homo sapiens GN=PPP1R13L PE=1 SV=4
Length = 828
Score = 31.6 bits (70), Expect = 1.3, Method: Composition-based stats.
Identities = 15/33 (45%), Positives = 20/33 (60%)
Query: 15 LYFTYKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+Y + Y+ E DELSF GE + V+ D PEE
Sbjct: 763 VYALWDYSAEFGDELSFREGESVTVLRRDGPEE 795
>sp|Q9QZM5|ABI1_RAT Abl interactor 1 OS=Rattus norvegicus GN=Abi1 PE=2 SV=3
Length = 476
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 10 NLIRLLYFTYKYTREDVDELSFDVGEIIRVVEYDD 44
N I + Y YT++ DELSF G II V++ +D
Sbjct: 414 NYIEKVVAIYDYTKDKDDELSFKEGAIIYVIKKND 448
>sp|Q8CBW3|ABI1_MOUSE Abl interactor 1 OS=Mus musculus GN=Abi1 PE=1 SV=3
Length = 481
Score = 31.6 bits (70), Expect = 1.5, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 10 NLIRLLYFTYKYTREDVDELSFDVGEIIRVVEYDD 44
N I + Y YT++ DELSF G II V++ +D
Sbjct: 419 NYIEKVVAIYDYTKDKDDELSFKEGAIIYVIKKND 453
>sp|Q54PB2|MRD1_DICDI Multiple RNA-binding domain-containing protein 1 OS=Dictyostelium
discoideum GN=mrd1 PE=3 SV=1
Length = 895
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 9/43 (20%)
Query: 16 YFTYKYTREDVDELSFDVGE----IIRVVEYDDPEEQVDKIFS 54
YF + YT+ED DVGE +R + Y EE ++K+FS
Sbjct: 345 YFEHDYTKEDE-----DVGESGRIFVRNLSYSTKEEDLEKVFS 382
>sp|Q9Z0R6|ITSN2_MOUSE Intersectin-2 OS=Mus musculus GN=Itsn2 PE=1 SV=2
Length = 1659
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 12/28 (42%), Positives = 18/28 (64%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + DEL+F G++I V+ DDP+
Sbjct: 1097 YDYMANNEDELNFSKGQLINVMNKDDPD 1124
>sp|P62484|ABI2_MOUSE Abl interactor 2 OS=Mus musculus GN=Abi2 PE=1 SV=1
Length = 446
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y YT++ DELSF G II V++ +D
Sbjct: 393 YDYTKDKEDELSFQEGAIIYVIKKND 418
>sp|Q9NYB9|ABI2_HUMAN Abl interactor 2 OS=Homo sapiens GN=ABI2 PE=1 SV=1
Length = 513
Score = 30.8 bits (68), Expect = 2.3, Method: Composition-based stats.
Identities = 13/26 (50%), Positives = 18/26 (69%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y YT++ DELSF G II V++ +D
Sbjct: 460 YDYTKDKEDELSFQEGAIIYVIKKND 485
>sp|Q80YF9|RHG33_MOUSE Rho GTPase-activating protein 33 OS=Mus musculus GN=Arhgap33 PE=1
SV=1
Length = 1305
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 20 KYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
+YT + DELSF+VG+I+ V++ E++
Sbjct: 220 RYTAQAPDELSFEVGDIVSVIDMPPTEDR 248
>sp|O14559|RHG33_HUMAN Rho GTPase-activating protein 33 OS=Homo sapiens GN=ARHGAP33 PE=1
SV=2
Length = 1287
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 21/29 (72%)
Query: 20 KYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
+YT + DELSF+VG+I+ V++ E++
Sbjct: 196 RYTAQAPDELSFEVGDIVSVIDMPPTEDR 224
>sp|Q8IZP0|ABI1_HUMAN Abl interactor 1 OS=Homo sapiens GN=ABI1 PE=1 SV=4
Length = 508
Score = 30.4 bits (67), Expect = 2.9, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 21/35 (60%)
Query: 10 NLIRLLYFTYKYTREDVDELSFDVGEIIRVVEYDD 44
N I + Y YT++ DELSF G II V++ +D
Sbjct: 446 NYIEKVVAIYDYTKDKDDELSFMEGAIIYVIKKND 480
>sp|O42287|ITSN1_XENLA Intersectin-1 OS=Xenopus laevis GN=itsn1 PE=1 SV=1
Length = 1270
Score = 30.4 bits (67), Expect = 3.0, Method: Composition-based stats.
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y ++ DEL+F G++I V+ +DP+
Sbjct: 1148 YDYIAQNDDELAFSKGQVINVLNKEDPD 1175
>sp|E9Q634|MYO1E_MOUSE Unconventional myosin-Ie OS=Mus musculus GN=Myo1e PE=1 SV=1
Length = 1107
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYD 43
Y Y +D DELSF+ +II +++ D
Sbjct: 1059 YAYDAQDTDELSFNANDIIDIIKED 1083
>sp|Q12965|MYO1E_HUMAN Unconventional myosin-Ie OS=Homo sapiens GN=MYO1E PE=1 SV=2
Length = 1108
Score = 29.6 bits (65), Expect = 5.3, Method: Composition-based stats.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYD 43
Y Y +D DELSF+ +II +++ D
Sbjct: 1060 YAYDAQDTDELSFNANDIIDIIKED 1084
>sp|Q5HYK7|SH319_HUMAN SH3 domain-containing protein 19 OS=Homo sapiens GN=SH3D19 PE=1
SV=2
Length = 790
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 18/28 (64%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
++Y E DELSF GEII + EY + E
Sbjct: 580 FEYIGEQKDELSFSEGEIIILKEYVNEE 607
>sp|Q9XVN3|IASPP_CAEEL Apoptotic enhancer 1 protein OS=Caenorhabditis elegans GN=ape-1
PE=1 SV=1
Length = 769
Score = 29.3 bits (64), Expect = 7.0, Method: Composition-based stats.
Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 4/37 (10%)
Query: 15 LYFTYKYTREDVDELSFDVGEIIRVVEYDDPEEQVDK 51
+Y Y Y DELSFD G+ + V+E D +VDK
Sbjct: 689 VYAAYGYEAAFEDELSFDAGDELTVIEKD----KVDK 721
>sp|Q63356|MYO1E_RAT Unconventional myosin-Ie OS=Rattus norvegicus GN=Myo1e PE=1 SV=1
Length = 1107
Score = 29.3 bits (64), Expect = 8.1, Method: Composition-based stats.
Identities = 10/25 (40%), Positives = 17/25 (68%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYD 43
Y Y +D DELSF+ ++I +++ D
Sbjct: 1059 YAYDAQDTDELSFNANDVIDIIKED 1083
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.143 0.420
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,571,156
Number of Sequences: 539616
Number of extensions: 912246
Number of successful extensions: 3165
Number of sequences better than 100.0: 28
Number of HSP's better than 100.0 without gapping: 26
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3128
Number of HSP's gapped (non-prelim): 39
length of query: 72
length of database: 191,569,459
effective HSP length: 44
effective length of query: 28
effective length of database: 167,826,355
effective search space: 4699137940
effective search space used: 4699137940
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)