RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4489
(72 letters)
>1mv3_A MYC box dependent interacting protein 1; tumor suppressor,
endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 213
Score = 55.9 bits (133), Expect = 2e-11
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDDPEEQVD 50
+ YT D DEL G+++ V+ + +PEEQ +
Sbjct: 148 QHDYTATDTDELQLKAGDVVLVIPFQNPEEQDE 180
>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus}
SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B
Length = 115
Score = 45.8 bits (108), Expect = 2e-08
Identities = 12/32 (37%), Positives = 20/32 (62%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVD 50
+ YT D DEL G+++ V+ + +PEEQ +
Sbjct: 51 HDYTATDTDELQLKAGDVVLVIPFQNPEEQDE 82
>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 85
Score = 39.7 bits (93), Expect = 4e-06
Identities = 7/29 (24%), Positives = 14/29 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y ++ LSF G++I+++ E
Sbjct: 15 RSYITDNCSLLSFHRGDLIKLLPVATLEP 43
>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast,
SH3 domain, structural genomics, contractIle protein;
0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A
Length = 68
Score = 38.8 bits (91), Expect = 6e-06
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ Y + D+L+F+ + I V +D E
Sbjct: 14 FPYKSDYEDDLNFEKDQEIIVTSVEDAE 41
>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 71
Score = 38.8 bits (91), Expect = 6e-06
Identities = 10/30 (33%), Positives = 17/30 (56%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
Y + DEL+F G+I+ ++E PE +
Sbjct: 14 YDNCPDCSDELAFSRGDILTILEQHVPESE 43
>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1
GTPase-activating protein...; GTPase activation,
membrane, metal-binding, SH3 domain; NMR {Homo sapiens}
PDB: 2rqt_A 2rqu_A
Length = 76
Score = 38.9 bits (91), Expect = 6e-06
Identities = 11/28 (39%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y ++ DEL+F GE+I V +D E
Sbjct: 17 YDCQADNDDELTFIEGEVIIVTGEEDQE 44
>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 93
Score = 39.0 bits (91), Expect = 8e-06
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + + DE+SF+ G+II+V E E
Sbjct: 12 YPFEARNHDEMSFNSGDIIQVDEKTVGEP 40
>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 79
Score = 38.5 bits (90), Expect = 8e-06
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y DE+SFD +II +E D
Sbjct: 24 YDYQAAGDDEISFDPDDIITNIEMIDD 50
>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein,
phosphorylation, SH3 domain, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 78
Score = 38.5 bits (90), Expect = 9e-06
Identities = 13/27 (48%), Positives = 18/27 (66%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y YT++ DELSF G II V++ +D
Sbjct: 24 YDYTKDKEDELSFQEGAIIYVIKKNDD 50
>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken
structural genomics/proteomics initiative, RSGI,
structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 98
Score = 38.9 bits (91), Expect = 9e-06
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + DELSF G++I V+ DDP+
Sbjct: 41 YDYAANNEDELSFSKGQLINVMNKDDPD 68
>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces
cerevisiae}
Length = 54
Score = 37.5 bits (88), Expect = 1e-05
Identities = 12/28 (42%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + DE+S D G+II V+ DD
Sbjct: 7 YAYEAQGDDEISIDPGDIITVIRGDDGS 34
>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Mus musculus}
Length = 81
Score = 38.1 bits (89), Expect = 1e-05
Identities = 8/29 (27%), Positives = 11/29 (37%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y Y + ELS E+I V +
Sbjct: 24 YDYDAANSTELSLLADEVITVFSVVGMDS 52
>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 78
Score = 38.1 bits (89), Expect = 1e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ R D DEL F +II ++ D
Sbjct: 14 LDFERHDDDELGFRKNDIITIISQKDE 40
>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 38.1 bits (89), Expect = 1e-05
Identities = 5/27 (18%), Positives = 15/27 (55%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDD 44
T + + DE++ +++ V++ +D
Sbjct: 23 TKAFFAKQADEVTLQQADVVLVLQQED 49
>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 70
Score = 37.6 bits (88), Expect = 1e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+ Y ++ DEL+ G+I+ ++ D +
Sbjct: 14 FPYEAQNDDELTIKEGDIVTLINKDCIDV 42
>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine
kinase, signal transduction, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 38.2 bits (89), Expect = 1e-05
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y E DELS G + V+E
Sbjct: 24 FNYMAEREDELSLIKGTKVIVMEKCSD 50
>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42
guanine nucleotide exchange factor (GEF) 9, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 81
Score = 37.8 bits (88), Expect = 1e-05
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + EL+F G++I+V++ + +
Sbjct: 17 WDHVTMANRELAFKAGDVIKVLDASNKD 44
>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3,
SH3-containing adapter molecule 1, SCAM-1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 90
Score = 38.2 bits (89), Expect = 1e-05
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + + ELSF GE I ++ +
Sbjct: 24 YTFKGDLEVELSFRKGEHICLIRKVNEN 51
>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal
transducing adaptor molecule, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 88
Score = 38.2 bits (89), Expect = 2e-05
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + + +EL+F GEII V++ D
Sbjct: 24 YDFEAVEDNELTFKHGEIIIVLDDSDAN 51
>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3,
cysteine-rich domain protein, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 37.6 bits (88), Expect = 2e-05
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
YK+ ++ ++L G+II ++E + +
Sbjct: 14 YKFVPQENEDLEMRPGDIITLLEDSNED 41
>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 79
Score = 37.7 bits (88), Expect = 2e-05
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + DEL+ + G+I+ + E +
Sbjct: 14 YSFQARQDDELNLEKGDIVIIHEKKEE 40
>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 37.7 bits (88), Expect = 2e-05
Identities = 11/30 (36%), Positives = 18/30 (60%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
Y Y + DELSF G IIR++ ++ ++
Sbjct: 15 YDYEGQTDDELSFPEGAIIRILNKENQDDD 44
>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Mus
musculus}
Length = 68
Score = 37.2 bits (87), Expect = 2e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y ++ DEL VG+II VV +
Sbjct: 14 FSYLPQNDDELELKVGDIIEVVGEVEE 40
>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 69
Score = 37.2 bits (87), Expect = 2e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y + DEL+F G +I V +
Sbjct: 14 YDYKAKRSDELTFCRGALIHNVSKEPG 40
>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human
osteoclast stimulating factor 1, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 37.2 bits (87), Expect = 2e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + DEL F+ G+II + + D
Sbjct: 14 YTFEPRTPDELYFEEGDIIYITDMSDT 40
>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 68
Score = 37.2 bits (87), Expect = 2e-05
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + E +EL G I+ V++ +
Sbjct: 14 FGFVPETKEELQVMPGNIVFVLKKGND 40
>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3
domain, PEST phosphatase-interacting protein 1, CD2-
binding protein 1; NMR {Homo sapiens}
Length = 69
Score = 37.2 bits (87), Expect = 2e-05
Identities = 9/27 (33%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y YT ++ DEL G+I+ V+ +
Sbjct: 15 YDYTAQNPDELDLSAGDILEVILEGED 41
>2l0a_A STAM-1, signal transducing adapter molecule 1; structural
genomics, northeast structural genomics consortiu
PSI-2, protein structure initiative; NMR {Homo sapiens}
Length = 72
Score = 36.9 bits (86), Expect = 3e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + + +EL+F GEII V++ DP
Sbjct: 24 YDFEAAEDNELTFKAGEIITVLDDSDP 50
>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein,
structural genomics, riken structural
genomics/proteomics initiative, RSGI; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 72
Score = 37.2 bits (87), Expect = 3e-05
Identities = 8/28 (28%), Positives = 9/28 (32%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y E ELSF G + V
Sbjct: 17 YACKAEHDSELSFTAGTVFDNVHPSQEP 44
>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 80
Score = 37.4 bits (87), Expect = 3e-05
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + + +L+F G+ I V+ D
Sbjct: 24 YSFEGQQPGDLNFQAGDRITVISKTDSHF 52
>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction,
hydrolase, protein binding; 1.65A {Mus musculus} PDB:
2d1x_A
Length = 65
Score = 36.8 bits (86), Expect = 3e-05
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y DE+SFD +II +E D
Sbjct: 16 YDYQAAGDDEISFDPDDIITNIEMIDD 42
>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR
{Homo sapiens}
Length = 92
Score = 37.4 bits (87), Expect = 3e-05
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y ++ DEL VG+II VV +
Sbjct: 25 FSYLPQNDDELELKVGDIIEVVGEVEE 51
>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain,
NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens}
SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B
Length = 193
Score = 38.4 bits (89), Expect = 3e-05
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDDPE 46
YT + DE+S GE + V+
Sbjct: 87 IKAYTAVEGDEVSLLEGEAVEVIHKLLDG 115
Score = 33.4 bits (76), Expect = 0.002
Identities = 6/26 (23%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y + E++ G+++ VVE +
Sbjct: 18 ADYEKTSGSEMALSTGDVVEVVEKSE 43
>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein;
1.07A {Homo sapiens}
Length = 58
Score = 36.4 bits (85), Expect = 3e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + DEL F+ G+II + + D
Sbjct: 10 YTFEPRTPDELYFEEGDIIYITDMSDT 36
>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics,
SH3 domain, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1
Length = 76
Score = 36.9 bits (86), Expect = 3e-05
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + + + DELS G+II V ++
Sbjct: 17 FNFKQTNEDELSVCKGDIIYVTRVEEG 43
>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 37.0 bits (86), Expect = 3e-05
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y Y DEL+ + E++ V+E D E+
Sbjct: 20 YSYKASQPDELTIEEHEVLEVIEDGDMED 48
>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein,
structural protein; 1.30A {Saccharomyces cerevisiae}
SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A
Length = 58
Score = 36.4 bits (85), Expect = 3e-05
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + +EL+F + I +E+ D +
Sbjct: 7 YDYDAAEDNELTFVENDKIINIEFVDDD 34
>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo
sapiens}
Length = 69
Score = 36.5 bits (85), Expect = 3e-05
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
Y E DELSF G+I+ V+E D
Sbjct: 10 YDNVAESPDELSFRKGDIMTVLEQDTQGLD 39
>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3
domain, sturctural genomics, structural genomics; 1.39A
{Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A
2a08_A
Length = 60
Score = 36.4 bits (85), Expect = 4e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + E+ +L F G++I +++ D +
Sbjct: 10 YSFAGEESGDLPFRKGDVITILKKSDSQN 38
>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain
protein 2A, endophilin 1, EEN-B1, structural genomics,
NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A
Length = 73
Score = 36.9 bits (86), Expect = 4e-05
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + E+ EL F G+II + D
Sbjct: 14 YDFEPENEGELGFKEGDIITLTNQIDE 40
>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural
protein; NMR {Dictyostelium discoideum}
Length = 80
Score = 37.0 bits (86), Expect = 4e-05
Identities = 7/28 (25%), Positives = 9/28 (32%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y D L F +II + D
Sbjct: 17 KDYNVSDTSLLPFKRNDIITITFKDQEN 44
>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus
musculus}
Length = 60
Score = 36.4 bits (85), Expect = 4e-05
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y +D DELSF+ +II +++ D
Sbjct: 12 YAYDAQDTDELSFNANDIIDIIKEDPS 38
>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A
Length = 71
Score = 36.5 bits (85), Expect = 4e-05
Identities = 9/27 (33%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y + DEL+F II+ VE +
Sbjct: 13 FDYKAQREDELTFIKSAIIQNVEKQEG 39
>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A
{Acanthamoeba} PDB: 2drk_A
Length = 58
Score = 36.4 bits (85), Expect = 4e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y + DEL+F G+ I V + D
Sbjct: 10 YDYDAQTGDELTFKEGDTIIVHQKDPA 36
>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling
protein; 2.05A {Homo sapiens} PDB: 2k6d_A
Length = 69
Score = 36.5 bits (85), Expect = 4e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+ Y ++ DEL+ G+I+ ++ D +
Sbjct: 9 FPYEAQNDDELTIKEGDIVTLINKDCIDV 37
>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel,
transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A
3h0f_A*
Length = 73
Score = 36.5 bits (85), Expect = 4e-05
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y D+LSF GE +++ + +
Sbjct: 22 YDYEAITEDDLSFHKGEKFQILNSSEGD 49
>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 68
Score = 36.5 bits (85), Expect = 4e-05
Identities = 8/28 (28%), Positives = 12/28 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y D +LSF GE I ++ +
Sbjct: 14 ADYAATDETQLSFLRGEKILILRQTTAD 41
>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 74
Score = 36.5 bits (85), Expect = 4e-05
Identities = 7/26 (26%), Positives = 14/26 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+T + + L+F +II V+E +
Sbjct: 17 CSWTAKKDNHLNFSKHDIITVLEQQE 42
>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N
protein 1; endocytosis, N-WAsp, dynamin, pacsin I,
transferase; 2.64A {Mus musculus} PDB: 2x3x_D
Length = 60
Score = 36.0 bits (84), Expect = 4e-05
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y ++ DELSF G+ + + +D +
Sbjct: 10 YDYDGQEQDELSFKAGDELTKLGEEDEQ 37
>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 73
Score = 36.5 bits (85), Expect = 4e-05
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + D+ ELS G+++R+ ++
Sbjct: 14 YNFAARDMRELSLREGDVVRIYSRIGGDQ 42
>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate
head cDNA, riken FULL-length enriched library,
clone:4831401O22, structural genomics; NMR {Mus
musculus}
Length = 68
Score = 36.4 bits (85), Expect = 4e-05
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y ++ +L F+ G++I + D
Sbjct: 14 CNYRGKNPGDLKFNKGDVILLRRQLDE 40
>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor
protein, downregulation, CBL, apoptosis, junction,
cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}
Length = 73
Score = 36.5 bits (85), Expect = 5e-05
Identities = 7/29 (24%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+ Y ++ DEL+ G+I+ ++ D +
Sbjct: 16 FPYEAQNDDELTIKEGDIVTLINKDCIDV 44
>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors,
peptoids, protein-protein recognition, proline-rich
motifs, signal transduction; 2.50A {Mus musculus} SCOP:
b.34.2.1
Length = 65
Score = 36.1 bits (84), Expect = 5e-05
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + D ++L F G+I+R+ + + +
Sbjct: 10 FDFNGNDEEDLPFKKGDILRIRDKPEEQ 37
>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2,
SH3 domain, TKL kinase, MKN28, structural GEN
structural genomics consortium, SGC; 2.00A {Homo
sapiens}
Length = 89
Score = 36.7 bits (85), Expect = 5e-05
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+ Y +EL+ G+ ++V+ D
Sbjct: 36 FDYEAAGDEELTLRRGDRVQVLSQDCAVS 64
>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide
interaction, signaling protein; HET: NCO; 0.92A {Rattus
norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A
Length = 59
Score = 36.1 bits (84), Expect = 5e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + + + DELSF G++I V ++
Sbjct: 11 FNFQQTNEDELSFSKGDVIHVTRVEEG 37
>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins,
CIN85, PIX/COOL, protein-protein interaction, X-RAY,
endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A
Length = 64
Score = 36.1 bits (84), Expect = 6e-05
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + + + DELSF G++I V ++
Sbjct: 13 FNFQQTNEDELSFSKGDVIHVTRVEEG 39
>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project
on protein structural and functional analyses; NMR
{Homo sapiens}
Length = 88
Score = 36.7 bits (85), Expect = 6e-05
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 17 FTYKYTREDVDELSFDVGEIIRVVEYDD 44
D L+ +VG+I++V +
Sbjct: 23 QKRVPCAYDKTALALEVGDIVKVTRMNI 50
>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13,
protein-protein interaction, structural genomics; NMR
{Mus musculus}
Length = 93
Score = 36.7 bits (85), Expect = 6e-05
Identities = 5/32 (15%), Positives = 14/32 (43%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVD 50
Y + +E+SF G+++ + + +
Sbjct: 24 YDFVAVSDEEISFRAGDMLNLALKEQQPKVRG 55
>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif)
2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early
endosome, signaling protein/signaling protein complex;
1.70A {Mus musculus} SCOP: b.34.2.1
Length = 62
Score = 36.0 bits (84), Expect = 6e-05
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + + +EL+F GE+I V++ D
Sbjct: 12 YDFEAVEDNELTFKHGELITVLDDSDAN 39
>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, endocytosis/exocytosis complex; NMR {Homo
sapiens} SCOP: b.34.2.1
Length = 80
Score = 36.3 bits (84), Expect = 7e-05
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y ++LS G++I +++ +
Sbjct: 14 SAYVASGSEQLSLAPGQLILILKKNT 39
>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens}
Length = 70
Score = 35.7 bits (83), Expect = 7e-05
Identities = 8/26 (30%), Positives = 15/26 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y+Y ++ DEL G+ + V++ D
Sbjct: 14 YQYRPQNEDELELREGDRVDVMQQCD 39
>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D
of cytokinesis protein 2; KIAA0209, KIAA0281,
apoptosis, membrane, phagocytosis; NMR {Homo sapiens}
Length = 119
Score = 37.0 bits (85), Expect = 7e-05
Identities = 6/29 (20%), Positives = 13/29 (44%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + +LS +G+++R+ E
Sbjct: 65 IYNFQGSGAPQLSLQIGDVVRIQETCGDW 93
>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding
protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A
1neb_A 3i35_A
Length = 64
Score = 35.7 bits (83), Expect = 8e-05
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y+ +D DE+SF G+ I V+ D
Sbjct: 13 YDYSAQDEDEVSFRDGDYIVNVQPIDD 39
>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma
1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus}
PDB: 1ywp_A 1ywo_A
Length = 61
Score = 35.7 bits (83), Expect = 8e-05
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y + DEL+F II+ VE D
Sbjct: 10 FDYKAQREDELTFTKSAIIQNVEKQDG 36
>2vwf_A Growth factor receptor-bound protein 2; polymorphism,
phosphoprotein, golgi apparatus, alternative splicing,
HOST-virus interaction, SH3C, signaling; 1.58A {Homo
sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A
Length = 58
Score = 35.6 bits (83), Expect = 8e-05
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + ++ EL F G+ I V++ DP
Sbjct: 9 FDFDPQEDGELGFRRGDFIHVMDNSDPN 36
>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm,
phosphorylation, SH3-binding, signaling protein; NMR
{Mus musculus} PDB: 2kro_A
Length = 64
Score = 35.7 bits (83), Expect = 8e-05
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
+ YT + DEL+F GEII ++ + E
Sbjct: 13 FPYTGTNEDELTFREGEIIHLISKETGEA 41
>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein
10, SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 70
Score = 35.7 bits (83), Expect = 8e-05
Identities = 6/29 (20%), Positives = 12/29 (41%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + +S GE + ++E D +
Sbjct: 14 YHFEGSSEGTISMAEGEDLSLMEEDKGDG 42
>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo
sapiens}
Length = 79
Score = 36.1 bits (84), Expect = 8e-05
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ +T EL+F G++I ++ + +
Sbjct: 25 FDFTGNSKLELNFKAGDVIFLLSRINKD 52
>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR
{Homo sapiens}
Length = 65
Score = 35.7 bits (83), Expect = 8e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
++Y ++ DEL VG+II + E +
Sbjct: 8 FEYIPQNEDELELKVGDIIDINEEVEE 34
>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin,
C-CBL-associated protein, CAP, SH3 domain protein 5
SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens}
PDB: 2dlm_A
Length = 68
Score = 35.7 bits (83), Expect = 8e-05
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + + + EL G+I+ + + D
Sbjct: 14 FDFKAQTLKELPLQKGDIVYIYKQIDQ 40
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative
splicing, coiled coil, cytoplasmic vesicle, endocytosis,
phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Length = 486
Score = 37.8 bits (86), Expect = 8e-05
Identities = 10/28 (35%), Positives = 17/28 (60%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y ++ DELSF G+ + +E +D +
Sbjct: 435 YDYEGQEHDELSFKAGDELTKMEDEDEQ 462
>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 71
Score = 35.7 bits (83), Expect = 9e-05
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
YT + DE+ F+ G + V+ +
Sbjct: 15 QPYTSQSKDEIGFEKGVTVEVIRKNLE 41
>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces
cerevisiae} SCOP: b.34.2.1
Length = 58
Score = 35.2 bits (82), Expect = 9e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y ++D DE++ G+ I +V D
Sbjct: 8 YAYVQKDDDEITITPGDKISLVARDTGS 35
>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3
domain/complex, adaptor protein (MONA); 1.5A {Mus
musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A
2d0n_A
Length = 58
Score = 35.2 bits (82), Expect = 9e-05
Identities = 9/28 (32%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + + DEL F GE++ V++ +P
Sbjct: 8 YDFEALEEDELGFRSGEVVEVLDSSNPS 35
>3u23_A CD2-associated protein; structural genomics, structural genomics
consortium, SGC, BE barrel, adaptor protein, protein
binding; 1.11A {Homo sapiens} PDB: 2krn_A
Length = 65
Score = 35.7 bits (83), Expect = 9e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
++Y ++ DEL VG+II + E +
Sbjct: 14 FEYIPQNEDELELKVGDIIDINEEVEE 40
>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein,
membrane, nuclear protein, phosphorylation,
polymorphism, transport, structural genomics; NMR {Homo
sapiens}
Length = 70
Score = 35.7 bits (83), Expect = 1e-04
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + + E+SF GE I ++ D
Sbjct: 14 FNFNGDTQVEMSFRKGERITLLRQVDEN 41
>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel,
endosome, L binding, membrane, phosphoprotein,
proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}
Length = 73
Score = 35.7 bits (83), Expect = 1e-04
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + E+ EL F G++I + D
Sbjct: 20 YDFEPENDGELGFREGDLITLTNQIDEN 47
>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein;
2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB:
2sem_A 3sem_A 1k76_A 1kfz_A
Length = 58
Score = 35.2 bits (82), Expect = 1e-04
Identities = 8/28 (28%), Positives = 17/28 (60%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + ++ EL+F G++I ++ DDP
Sbjct: 9 FDFNPQESGELAFKRGDVITLINKDDPN 36
>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring
finger 2 containing protein, NPPSFA; NMR {Mus musculus}
Length = 70
Score = 35.3 bits (82), Expect = 1e-04
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y+ +EL GE IRV+
Sbjct: 14 HTYSAHRPEELDLQKGEGIRVLGKYQD 40
>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 94
Score = 35.9 bits (83), Expect = 1e-04
Identities = 8/28 (28%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y YT ++ DEL G+ I + +
Sbjct: 23 YPYTPQNDDELELVPGDFIFMSPMEQTS 50
>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces
cerevisiae} PDB: 1ynz_A
Length = 58
Score = 35.2 bits (82), Expect = 1e-04
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y++ + +L G+ ++++E PE
Sbjct: 9 YQFDPQQDGDLGLKPGDKVQLLEKLSPE 36
>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide);
1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A
1m30_A 1m3b_A 1m3a_A
Length = 57
Score = 34.8 bits (81), Expect = 1e-04
Identities = 6/28 (21%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + D ++L F G+I+R+ + + +
Sbjct: 8 FDFNGNDEEDLPFKKGDILRIRDKPEEQ 35
>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator,
P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 71
Score = 35.3 bits (82), Expect = 1e-04
Identities = 9/28 (32%), Positives = 14/28 (50%), Gaps = 1/28 (3%)
Query: 19 YKYTR-EDVDELSFDVGEIIRVVEYDDP 45
YT+ D DE+SF G++ V +
Sbjct: 14 LPYTKVPDTDEISFLKGDMFIVHNELED 41
>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine
proteas; 1.40A {Synthetic construct} PDB: 4afz_C
4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A
1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C
1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ...
Length = 84
Score = 35.4 bits (82), Expect = 1e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y +LSF GE +++E+ +
Sbjct: 13 YDYNATRWTDLSFHKGEKFQILEFGPGD 40
>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor
protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}
Length = 58
Score = 34.8 bits (81), Expect = 1e-04
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y + DEL+ VGEII + +D
Sbjct: 8 FDYQAQHDDELTISVGEIITNIRKEDG 34
>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR,
CDC42P-interacting, S signaling protein; NMR
{Lodderomyces elongisporus}
Length = 120
Score = 36.1 bits (83), Expect = 1e-04
Identities = 9/28 (32%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y++ E DEL GE + + + D E
Sbjct: 10 YEFKAERDDELDVSPGENLSICAHYDYE 37
>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate
repeat-containing protein, structural genomics, NPPSFA;
NMR {Homo sapiens} PDB: 2kea_A
Length = 73
Score = 35.1 bits (81), Expect = 2e-04
Identities = 6/26 (23%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ + D D L G+II ++
Sbjct: 18 FTPSPYDTDSLKLKKGDIIDIISKPP 43
>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 35.0 bits (81), Expect = 2e-04
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ YT ELSF G+++R+ E +
Sbjct: 17 FAYTGRTAQELSFRRGDVLRLHERASSD 44
>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}
Length = 65
Score = 34.9 bits (81), Expect = 2e-04
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + + EL+ G+I+ + + D
Sbjct: 8 FDFQAQSPKELTLQKGDIVYIHKEVDK 34
>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2,
protei binding, chronic myeloid leukemia; 1.53A {Homo
sapiens}
Length = 69
Score = 34.6 bits (80), Expect = 2e-04
Identities = 12/27 (44%), Positives = 15/27 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y YT DEL+ G+IIRV D+
Sbjct: 13 YDYTANRSDELTIHRGDIIRVFFKDNE 39
>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3
domain, protein binding; 2.01A {Homo sapiens} PDB:
2kt1_A
Length = 90
Score = 35.3 bits (81), Expect = 2e-04
Identities = 7/40 (17%), Positives = 14/40 (35%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSLRTD 58
Y + RE ++L G+++ V V +
Sbjct: 18 YPFRRERPEDLELLPGDVLVVSRAALQALGVAEGGERCPQ 57
>2pqh_A Spectrin alpha chain, brain; SH3 domain, chimera, , structural
protein; 1.75A {Gallus gallus}
Length = 80
Score = 35.1 bits (81), Expect = 2e-04
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + E++ G+I+ ++ + +
Sbjct: 9 YDYQEKSPREVTMKKGDILTLLNSTNKD 36
>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 70
Score = 34.6 bits (80), Expect = 2e-04
Identities = 8/27 (29%), Positives = 16/27 (59%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y +++ ELS GE++ V+E ++
Sbjct: 15 SNYKKQENSELSLQAGEVVDVIEKNES 41
>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure,
signaling protein; NMR {Homo sapiens}
Length = 68
Score = 34.5 bits (80), Expect = 2e-04
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + E+ EL F G+II + D
Sbjct: 10 YDFEPENQGELGFKEGDIITLTNQIDE 36
>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, unknown function; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 79
Score = 34.7 bits (80), Expect = 2e-04
Identities = 6/32 (18%), Positives = 16/32 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVD 50
Y + + +ELS + ++++E+ D +
Sbjct: 20 YTFKARNPNELSVSANQKLKILEFKDVTGNTE 51
>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched
library, clone:9530076O17...; SH3_1 domain; NMR {Mus
musculus}
Length = 109
Score = 35.1 bits (81), Expect = 2e-04
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y ++LSF GE +++ + +
Sbjct: 34 YDYEARTTEDLSFKKGERFQIINNTEGD 61
>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A
{Saccharomyces cerevisiae}
Length = 59
Score = 34.1 bits (79), Expect = 3e-04
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + E+ +EL G+I+ +
Sbjct: 8 YDFEPENDNELRLAEGDIVFISYKHGQ 34
>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Homo sapiens}
Length = 80
Score = 34.8 bits (80), Expect = 3e-04
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDD 44
Y + E+SF G ++V+E +
Sbjct: 14 CSAYQKVQDSEISFPAGVEVQVLEKQE 40
>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal
transduction, riken structural genomics/proteomics
initiative, RSGI; NMR {Homo sapiens}
Length = 91
Score = 34.8 bits (80), Expect = 3e-04
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y ++ +EL+F+ GE + V+E + +
Sbjct: 24 YPFSSVTEEELNFEKGETMEVIEKPENDP 52
>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel,
beta sheet, zinc finger, metal binding protein; NMR
{Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A
Length = 71
Score = 34.2 bits (79), Expect = 3e-04
Identities = 8/30 (26%), Positives = 18/30 (60%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQ 48
Y ++ +EL+F+ GE + V+E + + +
Sbjct: 13 YPFSSVTEEELNFEKGETMEVIEKPENDPE 42
>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural
genomics/proteomics initiative, RSGI, structural
genomics, signaling protein; NMR {Homo sapiens} SCOP:
b.34.2.1
Length = 69
Score = 34.2 bits (79), Expect = 3e-04
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y Y+ + +L+F GE I V + D
Sbjct: 15 YPYSSVEPGDLTFTEGEEILVTQKDG 40
>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel,
ATP-binding, developmental protein, lipoprotein,
manganese, metal-binding; 1.60A {Gallus gallus} PDB:
2l2p_A
Length = 79
Score = 34.2 bits (79), Expect = 3e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y D+LSF GE +++ + +
Sbjct: 12 YDYEARTEDDLSFHKGEKFQILNSSEGD 39
>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex,
helix-turn-helix, hormone/growth factor complex; NMR
{Homo sapiens} SCOP: b.34.2.1
Length = 62
Score = 34.1 bits (79), Expect = 4e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ Y ++L F G+II V+ + E
Sbjct: 12 FSYEATQPEDLEFQEGDIILVLSKVNEE 39
>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain,
formin-binding protein 2, structural genomics, NPPSFA;
NMR {Homo sapiens}
Length = 72
Score = 34.2 bits (79), Expect = 4e-04
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ Y ELSF G + + + +
Sbjct: 16 FDYVGRTARELSFKKGASLLLYQRASDD 43
>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}
Length = 68
Score = 33.8 bits (78), Expect = 4e-04
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+T + V +L+F GEI+ V+E
Sbjct: 17 GDFTAQQVGDLTFKKGEILLVIEKKPDG 44
>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3
(SH3) domain, all beta structure, signaling protein;
HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*
Length = 62
Score = 33.7 bits (78), Expect = 4e-04
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+++ DEL +V + + V +
Sbjct: 10 FRFVPRHEDELELEVDDPLLVELQAE 35
>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.52A {Caenorhabditis elegans}
Length = 308
Score = 35.6 bits (81), Expect = 5e-04
Identities = 5/30 (16%), Positives = 9/30 (30%)
Query: 17 FTYKYTREDVDELSFDVGEIIRVVEYDDPE 46
F D +L G+ + V +
Sbjct: 254 FDRVPNAYDPTQLRVKKGQTVLVTQKMSNG 283
Score = 35.2 bits (80), Expect = 6e-04
Identities = 7/28 (25%), Positives = 16/28 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+K+T E +L F+ GE + ++ + +
Sbjct: 154 FKFTGERETDLPFEQGERLEILSKTNQD 181
>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding
protein G; sortase, protein ligation, intein, inset,
solubility enhancement; NMR {Mus musculus}
Length = 142
Score = 35.1 bits (80), Expect = 5e-04
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + D ELS G+II+++ +
Sbjct: 12 YDFCARDRSELSLKEGDIIKILNKKGQQ 39
>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane;
2.05A {Saccharomyces cerevisiae}
Length = 70
Score = 33.9 bits (78), Expect = 5e-04
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 17 FTYKYTREDVDELSFDVGEIIRVVEYDD 44
+ Y +D E+SF+ EI++V + +
Sbjct: 12 YPYDADDDDAYEISFEQNEILQVSDIEG 39
>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel
beta sheets, structural protein; 2.30A {Gallus gallus}
SCOP: b.34.2.1
Length = 83
Score = 33.9 bits (78), Expect = 6e-04
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + E++ G+I+ ++ + +
Sbjct: 24 YDYQEKSPREVTMKKGDILTLLNSTNKD 51
>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.70A {Rattus norvegicus}
Length = 73
Score = 33.4 bits (77), Expect = 6e-04
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + E++ G+I+ ++ + +
Sbjct: 12 YDYQEKSPREVTMKKGDILTLLNSTNKD 39
>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3
domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A
Length = 60
Score = 33.3 bits (77), Expect = 7e-04
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ +T EL+F G++I ++ + +
Sbjct: 11 FDFTGNSKLELNFKAGDVIFLLSRINKD 38
>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold
protein 1, islet-brain-1, IB-1, mitogen-activated P
kinase 8-interacting protein 1; 3.00A {Rattus
norvegicus}
Length = 71
Score = 33.4 bits (77), Expect = 7e-04
Identities = 5/26 (19%), Positives = 12/26 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+++ DEL +V + + V +
Sbjct: 13 FRFVPRHEDELELEVDDPLLVELQAE 38
>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2
domain, SH3 zinc-finger, SH3- binding, UBL conjugation
pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A
2krm_A
Length = 62
Score = 32.9 bits (76), Expect = 7e-04
Identities = 13/28 (46%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y DEL+ VGEIIR V+ E
Sbjct: 8 YDYDAVHDDELTIRVGEIIRNVKKLQEE 35
>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling
protein; 1.80A {Mus musculus}
Length = 60
Score = 32.9 bits (76), Expect = 7e-04
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ Y ELSF G + + +
Sbjct: 13 FDYVGRSARELSFKKGASLLLYHRASED 40
>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm,
cytoskeleton, SH3 domain, SIG protein; NMR
{Saccharomyces cerevisiae} PDB: 2rqw_A
Length = 108
Score = 34.0 bits (78), Expect = 8e-04
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + E DEL+ VGE + + + + E
Sbjct: 12 YDFKAEKADELTTYVGENLFICAHHNCE 39
>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB:
2o31_A 2o9v_A 2o2w_A
Length = 67
Score = 33.0 bits (76), Expect = 9e-04
Identities = 7/28 (25%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + + E+SF GE I ++ D
Sbjct: 13 FNFNGDTQVEMSFRKGERITLLRQVDEN 40
>1g2b_A Spectrin alpha chain; capping protein, calcium-binding,
duplication, repeat, SH3 domain, cytoskeleton, metal
binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1
PDB: 1tud_A
Length = 62
Score = 32.8 bits (75), Expect = 0.001
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + E++ G+I+ ++ + +
Sbjct: 28 YDYQEKSPREVTMKKGDILTLLNSTNKD 55
>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain,
SH2 domain, SRC homology 3, RAS signaling pathway,
proto- oncogene, phosphorylation; 1.5A {Homo sapiens}
PDB: 2j06_A
Length = 65
Score = 32.8 bits (75), Expect = 0.001
Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 19 YKYT-REDVDELSFDVGEIIRVVEYDDP 45
YT D DE+SF G++ V +
Sbjct: 12 LPYTKVPDTDEISFLKGDMFIVHNELED 39
>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3,
signaling protein; NMR {Homo sapiens}
Length = 67
Score = 32.7 bits (75), Expect = 0.001
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 17 FTYKYTREDVDELSFDVGEIIRVVEYDD 44
D L+ +VGE+++V + +
Sbjct: 13 QKRVPNAYDKTALALEVGELVKVTKINV 40
>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export;
2.5A {Homo sapiens} PDB: 2bzx_A
Length = 67
Score = 32.7 bits (75), Expect = 0.001
Identities = 6/28 (21%), Positives = 12/28 (42%)
Query: 17 FTYKYTREDVDELSFDVGEIIRVVEYDD 44
D L+ +VG+I++V +
Sbjct: 8 QKRVPCAYDKTALALEVGDIVKVTRMNI 35
>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked
agammaglobulinemia, XLA, BTK, SH3 domain, transferase;
NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A
Length = 67
Score = 32.6 bits (75), Expect = 0.001
Identities = 5/28 (17%), Positives = 12/28 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + ++L G+ ++E +
Sbjct: 15 YDYMPMNANDLQLRKGDEYFILEESNLP 42
>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural
genomics, NPPSFA, national project on protein
structural and functional analyses; NMR {Mus musculus}
Length = 77
Score = 33.1 bits (76), Expect = 0.001
Identities = 9/34 (26%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Query: 13 RLLYFTYKYTREDVDELSFDVGEIIRVVEYDDPE 46
R++Y + + +EL+ GEII V +
Sbjct: 13 RVMY-DFAAEPGN-NELTVTEGEIITVTNPNVGG 44
>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Mus musculus}
Length = 77
Score = 32.8 bits (75), Expect = 0.001
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ Y ++LSF G+ ++V++
Sbjct: 14 FDYQARTAEDLSFRAGDKLQVLDTSHEG 41
>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein;
NMR {Saccharomyces cerevisiae}
Length = 73
Score = 32.7 bits (75), Expect = 0.001
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + E+ +EL G+I+ +
Sbjct: 12 YDFEPENDNELRLAEGDIVFISYKHGQ 38
>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2,
signal transduction, adapter molecule, signaling
protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A
2eyw_A
Length = 230
Score = 33.7 bits (76), Expect = 0.002
Identities = 6/31 (19%), Positives = 16/31 (51%)
Query: 16 YFTYKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + D ++L F G+I+R+ + + +
Sbjct: 140 RALFDFNGNDEEDLPFKKGDILRIRDKPEEQ 170
>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling
protein; 2.01A {Caenorhabditis elegans}
Length = 174
Score = 33.6 bits (76), Expect = 0.002
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDDPE 46
T+K+T E +L F+ GE + ++ + +
Sbjct: 124 TFKFTGERETDLPFEQGERLEILSKTNQD 152
>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3,
signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A
2l3q_A 2ggr_A
Length = 304
Score = 33.8 bits (76), Expect = 0.002
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
D L+ +VGE+++V + +
Sbjct: 246 RVPNAYDKTALALEVGELVKVTKINVS 272
Score = 30.7 bits (68), Expect = 0.024
Identities = 6/29 (20%), Positives = 16/29 (55%)
Query: 18 TYKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + D ++L F G+I+R+ + + +
Sbjct: 140 LFDFNGNDEEDLPFKKGDILRIRDKPEEQ 168
>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein;
1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A
1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A
1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A
...
Length = 62
Score = 32.2 bits (74), Expect = 0.002
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + EL+ G+I+ ++ + +
Sbjct: 13 YDYQEKSPRELTVKKGDILTLLNSTNKD 40
>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3
domain, five-stranded barrel, mouse cDNA; NMR {Mus
musculus} SCOP: b.34.2.1
Length = 72
Score = 32.3 bits (74), Expect = 0.002
Identities = 5/29 (17%), Positives = 16/29 (55%), Gaps = 1/29 (3%)
Query: 19 YKYT-REDVDELSFDVGEIIRVVEYDDPE 46
+ +T + LSF G+++ ++ ++ +
Sbjct: 14 FPHTAGNNKTLLSFAQGDVLTLLIPEEKD 42
>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13;
compact beta-barrel of five anti-parrallel
beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP:
b.34.2.1 PDB: 1n5z_A
Length = 92
Score = 32.5 bits (74), Expect = 0.002
Identities = 6/33 (18%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 19 YKYTREDVD-ELSFDVGEIIRVVEYDDPEEQVD 50
Y + E+ + E++ G+++ ++ DP +
Sbjct: 21 YDFVPENPEMEVALKKGDLMAILSKKDPLGRDS 53
>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3
domain, phosphorylation; NMR {Mus musculus} SCOP:
b.34.2.1
Length = 67
Score = 31.8 bits (73), Expect = 0.002
Identities = 5/28 (17%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + + +L + G+ ++E +D
Sbjct: 9 YDFQATEAHDLRLERGQEYIILEKNDLH 36
>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6,
ATP-binding, cytoplasm, nucleotide-binding, nucleus,
phosphoprotein, polymorphism; NMR {Homo sapiens}
Length = 72
Score = 32.0 bits (73), Expect = 0.003
Identities = 6/27 (22%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ + +ELSF G++ V ++
Sbjct: 17 WDFKSRTDEELSFRAGDVFHVARKEEQ 43
>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein,
protein binding; NMR {Homo sapiens}
Length = 83
Score = 32.1 bits (73), Expect = 0.003
Identities = 6/27 (22%), Positives = 11/27 (40%), Gaps = 1/27 (3%)
Query: 19 YKYTR-EDVDELSFDVGEIIRVVEYDD 44
+ D L+ G++I V+E
Sbjct: 25 KDFWNLHDPTALNVRAGDVITVLEQHP 51
>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL,
SH3 domain, structural genomics, NPPSFA; NMR {Homo
sapiens}
Length = 81
Score = 32.0 bits (73), Expect = 0.003
Identities = 7/26 (26%), Positives = 16/26 (61%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
++TR EL+F G+++ ++E +
Sbjct: 24 CEHTRPKPGELAFRKGDVVTILEACE 49
>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR
{Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A
2k7a_A
Length = 77
Score = 32.0 bits (73), Expect = 0.003
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y D EL+ E +++ +
Sbjct: 27 YDYQTNDPQELALRCDEEYYLLDSSEIH 54
>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical
protein BAA76854.1, riken structural
genomics/proteomics initiative RSGI; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 92
Score = 31.9 bits (72), Expect = 0.003
Identities = 6/33 (18%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 15 LYF-TYKYTREDVDELSFDVGEIIRVVEYDDPE 46
L+ + ++S G+++ V++ DP
Sbjct: 19 LFQAERNFNAAQDLDVSLLEGDLVGVIKKKDPM 51
>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP:
b.34.2.1
Length = 71
Score = 31.5 bits (72), Expect = 0.004
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y + +L F G+++ +V
Sbjct: 18 YNFHGTAEQDLPFCKGDVLTIVAVTK 43
>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural
genomics, joint CENT structural genomics, JCSG, protein
structure initiative; HET: MLY; 2.20A {Homo sapiens}
PDB: 2frw_A 2js0_A
Length = 58
Score = 31.3 bits (71), Expect = 0.004
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
+ Y E DELS G + V+E
Sbjct: 8 FAYVAEREDELSLVXGSRVTVMEXCSD 34
>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine
kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A
4hck_A 5hck_A
Length = 86
Score = 31.6 bits (72), Expect = 0.004
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y Y ++LSF G+ + V+E
Sbjct: 32 YDYEAIHHEDLSFQKGDQMVVLEESG 57
>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels,
signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP:
b.34.2.1 PDB: 1h92_A 1kik_A
Length = 62
Score = 31.1 bits (71), Expect = 0.004
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ Y +L F+ GE +R++E
Sbjct: 13 HSYEPSHDGDLGFEKGEQLRILEQSG 38
>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding,
cell adhesion, cytoskeleton, LIPO magnesium, manganese,
metal-binding, myristate; 1.40A {Homo sapiens} PDB:
3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C*
2o88_A 1bbz_A 1awo_A
Length = 63
Score = 31.0 bits (71), Expect = 0.004
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + + LS GE +RV+ Y+ E
Sbjct: 12 YDFVASGDNTLSITKGEKLRVLGYNHNGE 40
>2v1r_A Peroxisomal membrane protein PAS20; protein transport,
translocation, transmembrane, peptide COM structural
genomics, peroxisome; 2.1A {Saccharomyces cerevisiae}
SCOP: b.34.2.1
Length = 80
Score = 31.6 bits (72), Expect = 0.004
Identities = 6/33 (18%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 19 YKYTREDVD-ELSFDVGEIIRVVEYDDPEEQVD 50
Y + E+ + E++ G+++ ++ DP +
Sbjct: 21 YDFVPENPEMEVALKKGDLMAILSKKDPLGRDS 53
>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A
{Saccharomyces cerevisiae} PDB: 1yp5_A
Length = 58
Score = 31.0 bits (71), Expect = 0.004
Identities = 5/27 (18%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 19 YKYT-REDVDELSFDVGEIIRVVEYDD 44
Y + EL G++I + +
Sbjct: 7 YDFPGSGSPSELPLKKGDVIYITREEP 33
>1wxb_A Epidermal growth factor receptor pathway substrate 8-like
protein; SH3, EPS8, EPS8L2, structural genomics,
NPPSFA; NMR {Homo sapiens}
Length = 68
Score = 31.1 bits (71), Expect = 0.005
Identities = 8/26 (30%), Positives = 14/26 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y +T + +ELS E++ V+E
Sbjct: 14 YDFTARNANELSVLKDEVLEVLEDGR 39
>1w1f_A Tyrosine-protein kinase LYN; SH3-domain, SH3 domain, tyrosine
kinase, signal transduction; NMR {Homo sapiens} PDB:
1wa7_A
Length = 65
Score = 31.1 bits (71), Expect = 0.005
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y Y D+LSF GE ++V+E
Sbjct: 14 YPYDGIHPDDLSFKKGEKMKVLEEHG 39
>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3,
signaling protein; NMR {Gallus gallus}
Length = 77
Score = 31.3 bits (71), Expect = 0.005
Identities = 3/23 (13%), Positives = 11/23 (47%)
Query: 24 EDVDELSFDVGEIIRVVEYDDPE 46
E++ G+I+ ++ + +
Sbjct: 3 MGPREVTMKKGDILTLLNSTNKD 25
>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange
factor, autoinhibition, domain-swapped, cell junction,
cell project endocytosis; 2.40A {Mus musculus} PDB:
3gf9_A
Length = 283
Score = 32.4 bits (74), Expect = 0.005
Identities = 13/28 (46%), Positives = 20/28 (71%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y YT ++ DEL+F G+II V+ +DP+
Sbjct: 9 YDYTAQNDDELAFSKGQIINVLNKEDPD 36
>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein
3, protein-protein interaction, structural genomics;
NMR {Homo sapiens}
Length = 68
Score = 30.7 bits (70), Expect = 0.006
Identities = 6/26 (23%), Positives = 14/26 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y++ + EL+ GE + V+++
Sbjct: 14 YEFEARNPRELTVVQGEKLEVLDHSK 39
>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus
musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A
4gbq_A
Length = 74
Score = 31.1 bits (71), Expect = 0.006
Identities = 9/26 (34%), Positives = 15/26 (57%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y + DELSF G+I++V+ +
Sbjct: 16 YDFKATADDELSFKRGDILKVLNEEC 41
>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene
homolog (avian)- signaling protein; NMR {Homo sapiens}
PDB: 2lqw_A*
Length = 303
Score = 32.3 bits (72), Expect = 0.007
Identities = 6/27 (22%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
D L+ +VG+I++V +
Sbjct: 246 RVPCAYDKTALALEVGDIVKVTRMNIN 272
Score = 28.8 bits (63), Expect = 0.10
Identities = 8/31 (25%), Positives = 16/31 (51%)
Query: 16 YFTYKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + D ++L F GEI+ ++E + +
Sbjct: 129 RTLYDFPGNDAEDLPFKKGEILVIIEKPEEQ 159
>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3,
actin-binding, cytoplasm, cytoskeleton,
phosphorylation, SH3 domain, DNA damage, DNA repair,
nucleus; NMR {Saccharomyces cerevisiae}
Length = 71
Score = 30.7 bits (70), Expect = 0.007
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + E DEL+ G+ + +++ ++
Sbjct: 13 YDFMAESQDELTIKSGDKVYILDDKKSKD 41
>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase,
tyrosine-protein kinase LYK, kinase EMT, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 85
Score = 31.2 bits (71), Expect = 0.007
Identities = 6/28 (21%), Positives = 11/28 (39%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y D EL+ E +++ +
Sbjct: 26 YDYQTNDPQELALRRNEEYCLLDSSEIH 53
>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural
genomics, phosphorylation, structural protein, yeast,
SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A
Length = 60
Score = 30.6 bits (70), Expect = 0.008
Identities = 6/29 (20%), Positives = 15/29 (51%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + E DEL+ G+ + +++ ++
Sbjct: 9 YDFMAESQDELTIKSGDKVYILDDKKSKD 37
>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P,
import machine, SH3 domain, protein transport; NMR
{Saccharomyces cerevisiae} SCOP: b.34.2.1
Length = 69
Score = 30.4 bits (69), Expect = 0.009
Identities = 6/33 (18%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 19 YKYTREDVD-ELSFDVGEIIRVVEYDDPEEQVD 50
Y + E+ + E++ G+++ ++ DP +
Sbjct: 14 YDFVPENPEMEVALKKGDLMAILSKKDPLGRDS 46
>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural
protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A
2kr3_A
Length = 65
Score = 30.4 bits (69), Expect = 0.009
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y + E++ G+I+ ++ + +
Sbjct: 8 YDYQEKSPREVTMKKGDILTLLNSTNKD 35
>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin
SH3 domain, SPC-S19P20S circular permutant, S protein;
NMR {Synthetic}
Length = 73
Score = 30.4 bits (69), Expect = 0.009
Identities = 4/28 (14%), Positives = 13/28 (46%), Gaps = 1/28 (3%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y+ E++ G+I+ ++ + +
Sbjct: 7 PPYSAGG-REVTMKKGDILTLLNSTNKD 33
>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 97
Score = 31.0 bits (70), Expect = 0.010
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 27 DELSFDVGEIIRVVEYDDPE 46
+EL F G+II+V D +
Sbjct: 40 EELPFKEGQIIKVYGDKDAD 59
>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator,
structural genomics, NPPSFA; NMR {Homo sapiens}
Length = 79
Score = 30.5 bits (69), Expect = 0.011
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y D+ F GE +RV+ +
Sbjct: 24 SDYPSPDISPPIFRRGEKLRVISDEG 49
>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction
adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1
d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A
Length = 217
Score = 31.6 bits (71), Expect = 0.012
Identities = 9/29 (31%), Positives = 16/29 (55%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + DELSF G+I++V+ + +
Sbjct: 7 YDFKATADDELSFKRGDILKVLNEECDQN 35
Score = 28.9 bits (64), Expect = 0.11
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 16 YFTYKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + ++ EL F G+ I V++ DP
Sbjct: 162 QALFDFDPQEDGELGFRRGDFIHVMDNSDPN 192
>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 76
Score = 30.0 bits (68), Expect = 0.016
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 27 DELSFDVGEIIRVVEYDDPE 46
EL+F G+II V D +
Sbjct: 29 AELTFCTGDIITVFGEIDED 48
>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil,
cytoplasm, SH3 domain, signaling protein; NMR {Homo
sapiens} PDB: 2rol_A
Length = 68
Score = 29.6 bits (67), Expect = 0.017
Identities = 5/27 (18%), Positives = 12/27 (44%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y + + ELS +++ V++
Sbjct: 15 YDFQARNSSELSVKQRDVLEVLDDSRK 41
>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural
genomics, structural genomics consortium, SGC, BE
barrel; HET: EDT; 1.50A {Homo sapiens}
Length = 67
Score = 29.2 bits (66), Expect = 0.029
Identities = 5/29 (17%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 19 YKYT-REDVDELSFDVGEIIRVVEYDDPE 46
+ + ++ LSF G++I ++ + +
Sbjct: 14 FSHAAGDNSTLLSFKEGDLITLLVPEARD 42
>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein
1; IRTKS-SH3, espfu, complex structure, protein
binding; NMR {Homo sapiens}
Length = 67
Score = 28.8 bits (65), Expect = 0.037
Identities = 6/29 (20%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 19 YKYTREDV-DELSFDVGEIIRVVEYDDPE 46
+ +T LSF G++I ++ ++ +
Sbjct: 13 FPHTAGSNKTLLSFAQGDVITLLIPEEKD 41
>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta
barrel, beta sandwich, signaling protei; 2.25A {Homo
sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D
Length = 466
Score = 29.9 bits (67), Expect = 0.038
Identities = 8/28 (28%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ + D EL F G++I V++ + E
Sbjct: 37 WDHVTMDDQELGFKAGDVIEVMDATNRE 64
>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase,
oxidoreductase; HET: CAF; 3.15A {Homo sapiens}
Length = 341
Score = 30.0 bits (66), Expect = 0.043
Identities = 6/28 (21%), Positives = 15/28 (53%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
+ +T EL+F G++I ++ + +
Sbjct: 181 FDFTGNSKLELNFKAGDVIFLLSRINKD 208
>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural
genomics, riken structural genomics/proteomics
initiative, RSGI, protein binding; NMR {Homo sapiens}
SCOP: b.34.2.1
Length = 96
Score = 29.1 bits (65), Expect = 0.044
Identities = 5/20 (25%), Positives = 8/20 (40%)
Query: 27 DELSFDVGEIIRVVEYDDPE 46
EL G+ + V D +
Sbjct: 38 AELPLTAGKYLYVYGDMDED 57
>1i07_A Epidermal growth factor receptor kinase substrate EPS8;
hormone/growth factor; 1.80A {Mus musculus} SCOP:
b.34.2.1 PDB: 1aoj_A 1i0c_A
Length = 60
Score = 28.4 bits (64), Expect = 0.047
Identities = 4/26 (15%), Positives = 12/26 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y + + ELS +++ +++
Sbjct: 8 YDFVARNSSELSVMKDDVLEILDDRR 33
>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic
protein NCK2; T-cell receptor, SH3 domain, immunology,
SH2 domain; NMR {Homo sapiens}
Length = 86
Score = 29.0 bits (65), Expect = 0.050
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ YT + EL E + +++
Sbjct: 38 WDYTAQQDQELDIKKNERLWLLDDSK 63
>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication,
repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus}
SCOP: b.34.2.1
Length = 63
Score = 28.5 bits (64), Expect = 0.052
Identities = 3/20 (15%), Positives = 11/20 (55%)
Query: 27 DELSFDVGEIIRVVEYDDPE 46
E++ G+I+ ++ + +
Sbjct: 4 REVTMKKGDILTLLNSTNKD 23
>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 28.5 bits (64), Expect = 0.053
Identities = 4/20 (20%), Positives = 9/20 (45%)
Query: 27 DELSFDVGEIIRVVEYDDPE 46
L+ G+++ V D +
Sbjct: 29 GRLALRAGDVVMVYGPMDDQ 48
>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein
complex, DOCK2, ELMO1, SH3 domain, PH domain bundle,
proline-rich sequence, cytoskeleton; 2.10A {Homo
sapiens}
Length = 184
Score = 29.7 bits (66), Expect = 0.054
Identities = 6/28 (21%), Positives = 13/28 (46%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y + +LS +G+++R+ E
Sbjct: 24 YNFQGSGAPQLSLQIGDVVRIQETCGDW 51
>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding,
signaling, HCK SH3 domain, PR binding; 3.45A {Homo
sapiens}
Length = 90
Score = 28.9 bits (65), Expect = 0.059
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y Y D+LSF G+ + V+E
Sbjct: 10 YDYVSWSPDDLSFQKGDQMVVLEESG 35
>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2
domain, signaling protein; NMR {Homo sapiens}
Length = 72
Score = 28.0 bits (63), Expect = 0.089
Identities = 4/26 (15%), Positives = 10/26 (38%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ Y + EL E + +++
Sbjct: 14 FDYVAQQEQELDIKKNERLWLLDDSK 39
>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3
domain, peptide complex, alternative splicing, disease
mutation, HOST-virus interaction, phosphoprotein,
polymorphism; 1.70A {Homo sapiens} PDB: 3i5s_A 1pht_A
1pnj_A 2pni_A 1pks_A 1pkt_A
Length = 83
Score = 28.1 bits (62), Expect = 0.11
Identities = 6/21 (28%), Positives = 13/21 (61%)
Query: 19 YKYTREDVDELSFDVGEIIRV 39
Y Y +E +++ +G+I+ V
Sbjct: 12 YDYKKEREEDIDLHLGDILTV 32
>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput,
structural genomics, contractIle protein; 1.80A
{Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A
Length = 69
Score = 27.7 bits (62), Expect = 0.11
Identities = 5/27 (18%), Positives = 10/27 (37%), Gaps = 1/27 (3%)
Query: 19 YKYT-REDVDELSFDVGEIIRVVEYDD 44
Y + EL G+I+ + +
Sbjct: 9 YDFPGSGSSSELPLKKGDIVFISRDEP 35
>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418
protein, SH3MD1, SH3 multiple domains 1, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 75
Score = 27.8 bits (62), Expect = 0.11
Identities = 5/26 (19%), Positives = 11/26 (42%), Gaps = 1/26 (3%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y ++ + F G + V+E +
Sbjct: 17 ADYEGDE-ETAGFQEGVSMEVLERNP 41
>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain,
hormone/growth factor complex; 1.39A {Homo sapiens}
SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A
Length = 108
Score = 28.1 bits (62), Expect = 0.12
Identities = 5/23 (21%), Positives = 9/23 (39%)
Query: 19 YKYTREDVDELSFDVGEIIRVVE 41
Y D L+ G+++ V
Sbjct: 29 QDYMAPDCRFLTIHRGQVVYVFS 51
>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR
{Homo sapiens} PDB: 2js2_A
Length = 67
Score = 27.2 bits (61), Expect = 0.16
Identities = 5/26 (19%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ YT + EL E + +++
Sbjct: 11 WDYTAQQDQELDIKKNERLWLLDDSK 36
>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC,
cell junction, cell membrane, membrane, SH3 domain;
2.80A {Homo sapiens}
Length = 308
Score = 28.2 bits (62), Expect = 0.18
Identities = 5/27 (18%), Positives = 11/27 (40%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
++ L F G++ V++ P
Sbjct: 11 FELEPSPPSGLGFTRGDVFHVLDTLHP 37
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.1 bits (62), Expect = 0.23
Identities = 5/27 (18%), Positives = 13/27 (48%)
Query: 23 REDVDELSFDVGEIIRVVEYDDPEEQV 49
+ V+ + G ++ +V Y+ +Q
Sbjct: 1827 QYVVERVGKRTGWLVEIVNYNVENQQY 1853
Score = 27.7 bits (61), Expect = 0.33
Identities = 13/70 (18%), Positives = 22/70 (31%), Gaps = 17/70 (24%)
Query: 3 DVILSALNLIRLLYFTYKYTREDVDELSFDV-----GEIIRVVEYDDPEEQVDKIFSLRT 57
D+I L + + + ++ V G +RV+ E VD I L
Sbjct: 437 DLINKDLVKNNVSF--------NAKDIQIPVYDTFDGSDLRVLSGSISERIVDCIIRLPV 488
Query: 58 DTVEMWDVIV 67
W+
Sbjct: 489 K----WETTT 494
Score = 26.2 bits (57), Expect = 1.1
Identities = 4/66 (6%), Positives = 21/66 (31%), Gaps = 14/66 (21%)
Query: 10 NLIRLLYFTYKYTREDVDELSFDVGEIIRVVEYDDPEEQVDK-------IFSLRTDTVEM 62
N +++ T + +++ ++ E + + + + +E
Sbjct: 1687 NYSAMIFETIVDGKLKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALT-----LMEK 1741
Query: 63 --WDVI 66
++ +
Sbjct: 1742 AAFEDL 1747
Score = 26.2 bits (57), Expect = 1.1
Identities = 11/52 (21%), Positives = 21/52 (40%), Gaps = 6/52 (11%)
Query: 12 IRLLYFTYKYTREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSLRTDTVEMW 63
+R LY TY D+ + S + + E +K+F+ + + W
Sbjct: 173 LRDLYQTYHVLVGDLIKFSAE-----TLSELIRTTLDAEKVFTQGLN-ILEW 218
>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3
domain, structural genomics center for structural
genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A*
1x27_A*
Length = 175
Score = 27.3 bits (60), Expect = 0.33
Identities = 7/26 (26%), Positives = 13/26 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
+ Y +L F+ GE +R++E
Sbjct: 19 HSYEPSHDGDLGFEKGEQLRILEQSG 44
>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus}
SCOP: b.34.2.1
Length = 78
Score = 26.1 bits (57), Expect = 0.57
Identities = 4/32 (12%), Positives = 11/32 (34%)
Query: 12 IRLLYFTYKYTREDVDELSFDVGEIIRVVEYD 43
+ Y L + G+I+ + + +
Sbjct: 18 FQEYYGIPPPPGAFGGFLRLNPGDIVELTKAE 49
>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase,
phosphorylation, SH2, SH3, phosphotyrosine,
proto-oncogene, phosphotransferase; HET: PTR; 1.50A
{Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB:
1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B*
3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A*
3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...
Length = 452
Score = 25.9 bits (57), Expect = 0.99
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y +LSF GE +++V + +
Sbjct: 9 YDYESRTETDLSFKKGERLQIVNNTEGD 36
>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase,
transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7
Length = 535
Score = 25.2 bits (55), Expect = 2.3
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPE 46
Y Y +LSF GE +++V + +
Sbjct: 92 YDYESRTETDLSFKKGERLQIVNNTEGD 119
>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase,
N-glycan, COR SH3 domain; 2.61A {Homo sapiens}
Length = 526
Score = 24.8 bits (53), Expect = 2.6
Identities = 7/26 (26%), Positives = 11/26 (42%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDD 44
Y + DE+ + G+II V
Sbjct: 449 YAHQPRTADEIPMEPGDIIGVAGNHW 474
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid,
national institute of allergy AN infectious diseases;
HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Length = 304
Score = 24.4 bits (54), Expect = 3.0
Identities = 4/13 (30%), Positives = 8/13 (61%)
Query: 57 TDTVEMWDVIVIG 69
++ ++ D VIG
Sbjct: 1 SNAMKYIDCAVIG 13
>1jmt_A Splicing factor U2AF 35 kDa subunit; RRM, RNA splicing, proline,
PPII helix, peptide recognition, RNA binding protein;
2.20A {Homo sapiens} SCOP: d.58.7.3
Length = 104
Score = 24.1 bits (52), Expect = 3.6
Identities = 12/63 (19%), Positives = 23/63 (36%), Gaps = 8/63 (12%)
Query: 17 FTYKYTREDVDELSFDV--------GEIIRVVEYDDPEEQVDKIFSLRTDTVEMWDVIVI 68
+ +E DE +V GE+ + D+ + + ++ E + VI
Sbjct: 27 VSDVEMQEHYDEFFEEVFTEMEEKYGEVEEMNVCDNLGDHLVGNVYVKFRREEDAEKAVI 86
Query: 69 GLN 71
LN
Sbjct: 87 DLN 89
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand
complex, cytoplasm, lipid synthesis, methyltransferase;
HET: D22; 2.39A {Mycobacterium tuberculosis} PDB:
1kpi_A*
Length = 302
Score = 24.5 bits (54), Expect = 3.8
Identities = 9/44 (20%), Positives = 21/44 (47%), Gaps = 5/44 (11%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSLRTDTVEM 62
Y + + DE+ + +R+ +++ +E VD+I S +
Sbjct: 108 YAHDKAMFDEVDSPRRKEVRIQGWEEFDEPVDRIVS-----LGA 146
>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1;
transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP:
b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A
Length = 495
Score = 24.3 bits (53), Expect = 4.1
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + + LS GE +RV+ Y+ E
Sbjct: 50 YDFVASGDNTLSITKGEKLRVLGYNHNGE 78
>1kjw_A Postsynaptic density protein 95; protein-protein interaction,
scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP:
b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A
Length = 295
Score = 24.3 bits (53), Expect = 4.3
Identities = 7/19 (36%), Positives = 12/19 (63%)
Query: 28 ELSFDVGEIIRVVEYDDPE 46
LSF G+++ V++ D E
Sbjct: 22 ALSFRFGDVLHVIDAGDEE 40
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Length = 512
Score = 24.1 bits (52), Expect = 4.4
Identities = 6/13 (46%), Positives = 10/13 (76%)
Query: 57 TDTVEMWDVIVIG 69
+ E++D+IVIG
Sbjct: 2 STRPEVFDLIVIG 14
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1;
mixed alpha beta fold, structural genomics, PSI; HET:
SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP:
c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Length = 287
Score = 24.0 bits (53), Expect = 4.5
Identities = 6/44 (13%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSLRTDTVEM 62
+ ++ V + + + ++ +E VD+I S +
Sbjct: 100 ANHVQQLVANSENLRSKRVLLAGWEQFDEPVDRIVS-----IGA 138
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates,
flavoenzymes, nicotine degradation, oxidoreductase;
HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB:
3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X*
3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Length = 431
Score = 24.0 bits (52), Expect = 4.9
Identities = 5/8 (62%), Positives = 7/8 (87%)
Query: 62 MWDVIVIG 69
M+D IV+G
Sbjct: 1 MYDAIVVG 8
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6,
pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A
{Pseudomonas fluorescens} SCOP: c.67.1.3
Length = 416
Score = 23.9 bits (52), Expect = 5.4
Identities = 10/44 (22%), Positives = 19/44 (43%), Gaps = 8/44 (18%)
Query: 10 NLIRL----LYFTYKYTREDVDELSFDVGEIIRVVEYDDPEEQV 49
++R LY T+ +V + +GEI+ + + QV
Sbjct: 372 RIMRFGFTPLYTTF----TEVWDAVQILGEILDRKTWAQAQFQV 411
>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor
complex, DOWN-regulated kinase, ordered activation
loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A*
2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B
Length = 454
Score = 23.9 bits (52), Expect = 6.1
Identities = 8/27 (29%), Positives = 13/27 (48%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDP 45
Y Y ++LSF G+ + V+E
Sbjct: 15 YDYEAIHHEDLSFQKGDQMVVLEESGE 41
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1,
geranylgeranyl bacteriochlorophyll reductase- like FIXC
homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma
acidophilum dsm 1728} PDB: 3oz2_A*
Length = 397
Score = 23.8 bits (52), Expect = 6.6
Identities = 5/10 (50%), Positives = 9/10 (90%)
Query: 60 VEMWDVIVIG 69
+E +DV+V+G
Sbjct: 2 METYDVLVVG 11
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 23.7 bits (50), Expect = 7.3
Identities = 4/35 (11%), Positives = 12/35 (34%), Gaps = 10/35 (28%)
Query: 21 YTREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSL 55
++E++D ++ D ++F
Sbjct: 46 LSKEEIDH----------IIMSKDAVSGTLRLFWT 70
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor
complex, isocitrate lyase superfamily; HET: ICT; 1.60A
{Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A
1o5q_A
Length = 295
Score = 23.4 bits (51), Expect = 8.6
Identities = 8/33 (24%), Positives = 17/33 (51%)
Query: 22 TREDVDELSFDVGEIIRVVEYDDPEEQVDKIFS 54
T++ V + E+ + Y EE++D +F+
Sbjct: 258 TQKSVIDTMQTRNELYESINYYQYEEKLDNLFA 290
>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK,
signal transduction, SH2, SH3, SRC homology, tyrosine
kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1
d.93.1.1 d.144.1.7 PDB: 1jeg_A
Length = 450
Score = 23.5 bits (51), Expect = 9.4
Identities = 5/29 (17%), Positives = 11/29 (37%)
Query: 19 YKYTREDVDELSFDVGEIIRVVEYDDPEE 47
Y + +L F G+++ +V
Sbjct: 18 YNFHGTAEQDLPFCKGDVLTIVAVTKDPN 46
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for
infectious disease, ssgcid; 2.90A {Burkholderia
pseudomallei 1655}
Length = 298
Score = 23.0 bits (50), Expect = 9.8
Identities = 6/37 (16%), Positives = 17/37 (45%)
Query: 22 TREDVDELSFDVGEIIRVVEYDDPEEQVDKIFSLRTD 58
T++ ++ + Y EE++D++F+ +
Sbjct: 262 TQKAAVPTMQTRAQLYDYLGYYAYEEKLDQLFNQGRN 298
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.323 0.143 0.420
Gapped
Lambda K H
0.267 0.0809 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 1,227,798
Number of extensions: 65079
Number of successful extensions: 404
Number of sequences better than 10.0: 1
Number of HSP's gapped: 404
Number of HSP's successfully gapped: 221
Length of query: 72
Length of database: 6,701,793
Length adjustment: 42
Effective length of query: 30
Effective length of database: 5,529,111
Effective search space: 165873330
Effective search space used: 165873330
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (23.3 bits)