RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy4493
(323 letters)
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch
repair, nucleotide-binding, DNA-binding, polymorphism,
nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens}
PDB: 2wwy_A*
Length = 591
Score = 388 bits (998), Expect = e-132
Identities = 141/330 (42%), Positives = 192/330 (58%), Gaps = 69/330 (20%)
Query: 47 TDYPWSDRVRSVLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPT--GK----------- 93
D+PWS +V+ +L++ F L FRP QL IN+ + K+ ++MPT GK
Sbjct: 24 EDFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPTGGGKSLCYQLPALCS 83
Query: 94 ------------L-------LKKKKIC-------------------LMTESSSLKLLYVS 115
L LK+ I ++ ++S LKL+YV+
Sbjct: 84 DGFTLVICPLISLMEDQLMVLKQLGISATMLNASSSKEHVKWVHAEMVNKNSELKLIYVT 143
Query: 116 PEKLAKSKSFMTKLQKMYKAGCLARIAIDEVHCCSSWGHDFRPDYQYLSILKTMFPDVPI 175
PEK+AKSK FM++L+K Y+A RIA+DEVHCCS WGHDFRPDY+ L ILK FP+ +
Sbjct: 144 PEKIAKSKMFMSRLEKAYEARRFTRIAVDEVHCCSQWGHDFRPDYKALGILKRQFPNASL 203
Query: 176 LGLTATATTKVMLDVQKMLQIEDCVVIKAPFNRPNLFYEVRIKPAAQKDCLDELADLMSR 235
+GLTATAT V+ D QK+L IE C A FNRPNL+YEVR KP+ +D ++++ L++
Sbjct: 204 IGLTATATNHVLTDAQKILCIEKCFTFTASFNRPNLYYEVRQKPSNTEDFIEDIVKLING 263
Query: 236 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 277
R++ QSGIIY S K+ E + L+N G+ AYHA LE
Sbjct: 264 RYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHANLEPEDKTTVHRKWSANEIQVVVA 323
Query: 278 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 307
++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 324 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 353
Score = 71.6 bits (176), Expect = 6e-14
Identities = 18/44 (40%), Positives = 30/44 (68%)
Query: 4 NYPWSDRVRSVLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPT 47
++PWS +V+ +L++ F L FRP QL IN+ + K+ ++MPT
Sbjct: 25 DFPWSGKVKDILQNVFKLEKFRPLQLETINVTMAGKEVFLVMPT 68
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix,
helix-turn-helix, ATP binding, Zn(2+) binding,
hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43
c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Length = 523
Score = 261 bits (670), Expect = 7e-84
Identities = 99/319 (31%), Positives = 152/319 (47%), Gaps = 77/319 (24%)
Query: 56 RSVLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPT--GK--------LLKKKK------ 99
+ VL+ F FRP Q I+ L +D +++MPT GK LL
Sbjct: 14 KQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPTGGGKSLCYQIPALLLNGLTVVVSP 73
Query: 100 -ICLM--------------------------------TESSSLKLLYVSPEKLAKSKSFM 126
I LM + ++LLY++PE+L +F+
Sbjct: 74 LISLMKDQVDQLQANGVAAACLNSTQTREQQLEVMTGCRTGQIRLLYIAPERLM-LDNFL 132
Query: 127 TKLQKMYKAGCLARIAIDEVHCCSSWGHDFRPDYQYLSILKTMFPDVPILGLTATATTKV 186
L +A+DE HC S WGHDFRP+Y L L+ FP +P + LTATA
Sbjct: 133 EHLAHW----NPVLLAVDEAHCISQWGHDFRPEYAALGQLRQRFPTLPFMALTATADDTT 188
Query: 187 MLDVQKMLQIEDCVVIKAPFNRPNLFYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYT 246
D+ ++L + D ++ + F+RPN+ Y + K LD+L + + R +SGIIY
Sbjct: 189 RQDIVRLLGLNDPLIQISSFDRPNIRYMLMEK----FKPLDQLMRYVQEQ-RGKSGIIYC 243
Query: 247 TSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKP 288
S + ED L+++G+ +AYHA LE+NV ++AFG+GI+KP
Sbjct: 244 NSRAKVEDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKP 303
Query: 289 NVRFVIHHCLSKSMENFYQ 307
NVRFV+H + +++E++YQ
Sbjct: 304 NVRFVVHFDIPRNIESYYQ 322
Score = 42.9 bits (102), Expect = 1e-04
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 12 RSVLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPT 47
+ VL+ F FRP Q I+ L +D +++MPT
Sbjct: 14 KQVLQETFGYQQFRPGQEEIIDTVLSGRDCLVVMPT 49
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 49.3 bits (117), Expect = 1e-06
Identities = 58/383 (15%), Positives = 117/383 (30%), Gaps = 140/383 (36%)
Query: 26 PNQLAAINIALLKKD--AIIIMPTDYPWSD-RVRSV--LKSKF----------------- 63
P + L++ I+ PT+ +D + L KF
Sbjct: 23 PTASF-FIASQLQEQFNKILPEPTEGFAADDEPTTPAELVGKFLGYVSSLVEPSKVGQFD 81
Query: 64 -----NLTDFRPNQLAAINI-ALLKKDAIIIMPTGKLLKKKKIC-------------LMT 104
LT+F L +I AL K ++ L+K K++
Sbjct: 82 QVLNLCLTEFENCYLEGNDIHALAAK--LLQENDTTLVKTKELIKNYITARIMAKRPFDK 139
Query: 105 ESSSLKLLYVSPEKLAK----------SKSFMTKLQKMYK-------------AGCLARI 141
+S+S L E A+ + + +L+ +Y+ A L+ +
Sbjct: 140 KSNS-ALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDLYQTYHVLVGDLIKFSAETLSEL 198
Query: 142 AIDEVHCCSSWGHDF-----------RPDYQYL-SILKTMFPDVPILGLTATA----TTK 185
+ + PD YL SI + P++G+ A T K
Sbjct: 199 IRTTLDAEKVFTQGLNILEWLENPSNTPDKDYLLSIPISC----PLIGVIQLAHYVVTAK 254
Query: 186 VM----LDVQKMLQ-----IEDCVVIKAP--------FNR------PNLFY--------- 213
++ +++ L+ + V A F LF+
Sbjct: 255 LLGFTPGELRSYLKGATGHSQGLVTAVAIAETDSWESFFVSVRKAITVLFFIGVRCYEAY 314
Query: 214 -EVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDL-REELRNRGLRVSAYHA 271
+ P+ +D L+ N G+ + + +L +E++++ + ++ H
Sbjct: 315 PNTSLPPSILEDSLE-----------NNEGV--PSPMLSISNLTQEQVQDYVNKTNS-HL 360
Query: 272 KLESNVSIAFGLGIDKPNVRFVI 294
V I+ L ++ V+
Sbjct: 361 PAGKQVEIS--L-VNGAK-NLVV 379
Score = 44.7 bits (105), Expect = 3e-05
Identities = 47/341 (13%), Positives = 100/341 (29%), Gaps = 124/341 (36%)
Query: 25 RPNQLA--AINIALLKKDAIIIMPTDYPWSDRVRSVLKSKFNLTDFRPNQLAAINIALLK 82
RP L+ ++ LL +PT + + S L+ +FN
Sbjct: 7 RPLTLSHGSLEHVLL-------VPTA-SFF--IASQLQEQFN------------------ 38
Query: 83 KDAIIIMPTGKLLKKKKICLMTESSSLKLL-----YVSPEKL-AKSKSFMTKLQKMYKA- 135
I+ PT + ++ +L+ YVS +K F L
Sbjct: 39 --KILPEPTEGFAADDE-----PTTPAELVGKFLGYVSSLVEPSKVGQFDQVLNLCLTEF 91
Query: 136 --GCLARIAIDEVHCCSSWGHDFRPDYQYLSILKTMFPDVPILGLTATATTKVMLDVQKM 193
L +++H ++ + + ++ +++
Sbjct: 92 ENCYLEG---NDIH----------------ALAAKLLQEND----------TTLVKTKEL 122
Query: 194 LQ--IEDCVVIKAPFNRPN---LFYEVRIKPAA-------Q---KDCLDELADLMSRRFR 238
++ I ++ K PF++ + LF V A Q D +EL DL ++
Sbjct: 123 IKNYITARIMAKRPFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDYFEELRDL----YQ 178
Query: 239 NQSGIIYTTSIKE-CEDLREELRNRGLRVSAYHAKLESNVSIAFGLGID----------K 287
Y + + + E L + + F G++
Sbjct: 179 -----TYHVLVGDLIKFSAETLSEL--------IRTTLDAEKVFTQGLNILEWLENPSNT 225
Query: 288 PNVRFVIHHCLS------KSMENFYQVSIAFGLGKHSFRSR 322
P+ +++ +S + ++ + G RS
Sbjct: 226 PDKDYLLSIPISCPLIGVIQLAHYVVTAKLLGFTPGELRSY 266
Score = 28.5 bits (63), Expect = 3.7
Identities = 33/183 (18%), Positives = 54/183 (29%), Gaps = 59/183 (32%)
Query: 6 PWSDRVRSVLK---SKFNLTDFRPNQLAAINIALLKKDAIIIMPTDY-----PWSDRVRS 57
P +V L ++ P L +N+ L K A P+ P+S+R
Sbjct: 361 PAGKQVEISLVNGAKNLVVSGP-PQSLYGLNLTLRKAKA----PSGLDQSRIPFSER--- 412
Query: 58 VLKSKFNL-----------------TDFRPNQLAAINIALLKKDAIIIMP-----TGKLL 95
K KF+ +D L N++ KD I P G L
Sbjct: 413 --KLKFSNRFLPVASPFHSHLLVPASDLINKDLVKNNVSFNAKDIQI--PVYDTFDGSDL 468
Query: 96 KKKKICLMTESSSLKLLYVSP---EKLAKSKS-----F-------MTKLQKMYKAGCLAR 140
+ + + + P E + K+ F + L K G R
Sbjct: 469 RVLSGSIS--ERIVDCIIRLPVKWETTTQFKATHILDFGPGGASGLGVLTHRNKDGTGVR 526
Query: 141 IAI 143
+ +
Sbjct: 527 VIV 529
Score = 27.7 bits (61), Expect = 6.2
Identities = 12/58 (20%), Positives = 22/58 (37%), Gaps = 26/58 (44%)
Query: 63 FNLTDFRPNQ-------LAAINIA--LLKKDAIIIMPTGKLLKKKKICL--MTESSSL 109
+N+ NQ L A++ +L +K +KI + + +S SL
Sbjct: 1846 YNV----ENQQYVAAGDLRALDTVTNVLNF-----------IKLQKIDIIELQKSLSL 1888
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 45.2 bits (106), Expect = 2e-05
Identities = 53/324 (16%), Positives = 110/324 (33%), Gaps = 76/324 (23%)
Query: 4 NYPWSDRVRSVLKSKFNLTDFRPNQLAAINIALLKK---DAIIIMPTDYPWSDRVRSVLK 60
Y + D + SV + F + +F + + ++L K D II+ + R+ L
Sbjct: 15 QYQYKD-ILSVFEDAF-VDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWTLL 72
Query: 61 SKFNLTDFRPNQLAAINIALLKKDAIIIM---------PTG--KLLKKKKICLMTESSSL 109
SK + + +L+ + +M P+ ++ +++ L ++
Sbjct: 73 SK------QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVF 126
Query: 110 KLLYVS-PEKLAKSKSFMTKLQK--------MYKAG--CLARIAI--DEVHCCSS----W 152
VS + K + + +L+ + +G +A +V C W
Sbjct: 127 AKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFW 186
Query: 153 ---GHDFRPDYQYLSILKTMFPDVPILGLTATATTKVMLDVQKMLQIEDCVVIKAPFNRP 209
+ P+ L +L+ + + T++ L+I I+A R
Sbjct: 187 LNLKNCNSPE-TVLEMLQKLL-----YQIDPNWTSRSDHSSNIKLRIHS---IQAELRR- 236
Query: 210 NLFYEVRIKPAAQKDCLDELADLMSRR----FRNQSGIIYTTSIKECEDLREELRNRGL- 264
L KP ++CL L ++ + + F I+ TT R + +
Sbjct: 237 -LLKS---KP--YENCLLVLLNVQNAKAWNAFNLSCKILLTT------------RFKQVT 278
Query: 265 -RVSAYHAKLESNVSIAFGLGIDK 287
+SA S + L D+
Sbjct: 279 DFLSAATTTHISLDHHSMTLTPDE 302
Score = 42.9 bits (100), Expect = 1e-04
Identities = 56/333 (16%), Positives = 92/333 (27%), Gaps = 103/333 (30%)
Query: 7 W-----SDRVRSVLKSKFNL-TDFRPNQLA----AINIALLKKDAI-----IIMPTDYPW 51
W + +VL+ L PN + + NI L ++ Y
Sbjct: 186 WLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN 245
Query: 52 S----DRVRS--VLKSKFNL-------TDFRPNQLAAINIALLKKDAIIIMPTGKLLKKK 98
V++ + FNL T R Q+ D + T +
Sbjct: 246 CLLVLLNVQNAKAWNA-FNLSCKILLTT--RFKQVT---------DFLSAATTTHISLDH 293
Query: 99 KICLMTESSSLKL----LYVSPEKL----------------AKSKSFMTKLQ--KMYKAG 136
+T L L P+ L + + K
Sbjct: 294 HSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCD 353
Query: 137 CLARIAIDEVHCCSSWGH----DFRPDYQYLSILKTMFP-DVPI----LGL--TATATTK 185
L I I+ SS ++R + LS+ FP I L L +
Sbjct: 354 KLTTI-IE-----SSLNVLEPAEYRKMFDRLSV----FPPSAHIPTILLSLIWFDVIKSD 403
Query: 186 VMLDVQKMLQIEDCVVIKAPFNR----PNLFYEVRIKPAAQKDCLDELADLMSRRFRNQS 241
VM+ V K+ + +V K P P+++ E+++K L+ L R +
Sbjct: 404 VMVVVNKLHK--YSLVEKQPKESTISIPSIYLELKVK-------LENEYAL-HRSIVDH- 452
Query: 242 GIIYTTSIKECEDLREELRNRGLRVS--AYHAK 272
Y D S +H K
Sbjct: 453 ---YNIPKTFDSDDLIPPYLDQYFYSHIGHHLK 482
>1fuk_A Eukaryotic initiation factor 4A; helicase, DEAD-box protein,
translation; 1.75A {Saccharomyces cerevisiae} SCOP:
c.37.1.19
Length = 165
Score = 39.1 bits (92), Expect = 5e-04
Identities = 29/111 (26%), Positives = 47/111 (42%), Gaps = 22/111 (19%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
FY V ++ K + L DL Q+ +I+ + ++ E+L +LRN VSA ++
Sbjct: 7 FY-VNVEEEEYK--YECLTDLYDSISVTQA-VIFCNTRRKVEELTTKLRNDKFTVSAIYS 62
Query: 272 KLE---------------SNVSIA---FGLGIDKPNVRFVIHHCLSKSMEN 304
L S + I+ GID V VI++ L + EN
Sbjct: 63 DLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVINYDLPANKEN 113
>1t5i_A C_terminal domain of A probable ATP-dependent RNA helicase;
RECA-like fold, PRE-mRNA processing protein; 1.90A {Homo
sapiens} SCOP: c.37.1.19
Length = 172
Score = 37.6 bits (88), Expect = 0.002
Identities = 18/87 (20%), Positives = 30/87 (34%), Gaps = 19/87 (21%)
Query: 226 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----------- 274
+L DL+ NQ +I+ S++ C L + L + A H +
Sbjct: 19 NRKLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQF 77
Query: 275 ----SNVSIA---FGLGIDKPNVRFVI 294
+ +A FG G+D V
Sbjct: 78 KDFQRRILVATNLFGRGMDIERVNIAF 104
>3h1t_A Type I site-specific restriction-modification system, R
(restriction) subunit; hydrolase, restriction enzyme
HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Length = 590
Score = 36.3 bits (84), Expect = 0.012
Identities = 49/325 (15%), Positives = 89/325 (27%), Gaps = 115/325 (35%)
Query: 51 WSDRVRSVLKSKFNLTDFRPN--QLAAIN-----IALLKKDAIIIMPTG----------- 92
+ + ++L +++ + P Q AIN + KK ++I M TG
Sbjct: 160 KDEDLDTLLSPYHHVSGYSPRYYQQIAINRAVQSVLQGKKRSLITMATGTGKTVVAFQIS 219
Query: 93 KLLKKKKICLMTESSSLKLLYV--------------------SPEKLAKSK--------- 123
L + + ++L++ + K+ K
Sbjct: 220 WKLWSARWNRTGDYRKPRILFLADRNVLVDDPKDKTFTPFGDARHKIEGGKVVKSREIYF 279
Query: 124 ----SFMTKLQKMYKAGCLAR-----IAIDEVHCCSSWGHDFRPDYQYLSILKTMFPDVP 174
S + ++ + I IDE H S+ R + + IL+ F
Sbjct: 280 AIYQSIASDERRPGLYKEFPQDFFDLIIIDECHRGSA-----RDNSNWREILEY-FEPAF 333
Query: 175 ILGLTATATTKVMLDV------------------QKML---------------------- 194
+G+TAT + D L
Sbjct: 334 QIGMTATPLREDNRDTYRYFGNPIYTYSLRQGIDDGFLAPYRVHRVISEVDAAGWRPSKG 393
Query: 195 -------QIEDCVVIKAPFNRPNLFYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 247
+I D F R + + R L D M R R I++
Sbjct: 394 DVDRFGREIPDGEYQTKDFER-VIALKARTDAF-----AKHLTDFMKRTDRFAKTIVFCV 447
Query: 248 SIKECEDLREELRNRGLRVSAYHAK 272
+ +++R L N +S H
Sbjct: 448 DQEHADEMRRALNNLNSDLSRKHPD 472
>2rb4_A ATP-dependent RNA helicase DDX25; rossmann fold, structural
genomics, structural consortium, SGC, alternative
initiation, ATP-binding, devel protein; 2.80A {Homo
sapiens}
Length = 175
Score = 35.3 bits (82), Expect = 0.012
Identities = 20/101 (19%), Positives = 34/101 (33%), Gaps = 22/101 (21%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
+Y V + K L ++ Q+ II+ + + + L E+ G +VS
Sbjct: 11 YY-VLCEHRKDK--YQALCNIYGSITIGQA-IIFCQTRRNAKWLTVEMIQDGHQVSLLSG 66
Query: 272 KLE---------------SNVSIAFGL---GIDKPNVRFVI 294
+L V I + GID V V+
Sbjct: 67 ELTVEQRASIIQRFRDGKEKVLITTNVCARGIDVKQVTIVV 107
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling,
archaea, isomeras; 2.35A {Thermotoga maritima} PDB:
3p4y_A 3p4x_A*
Length = 414
Score = 34.7 bits (80), Expect = 0.038
Identities = 17/87 (19%), Positives = 33/87 (37%), Gaps = 23/87 (26%)
Query: 226 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------- 277
L EL ++ +I+ + +E ++L E L+ V ++ E N
Sbjct: 244 LVELLEIF-----RDGILIFAQTEEEGKELYEYLKRFKFNVGETWSEFEKNFEDFKVGKI 298
Query: 278 ------SIAFGL---GIDKPN-VRFVI 294
+G G+D P +++VI
Sbjct: 299 NILIGVQAYYGKLTRGVDLPERIKYVI 325
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding,
RNA binding protein; 2.10A {Saccharomyces cerevisiae}
SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Length = 400
Score = 34.5 bits (80), Expect = 0.043
Identities = 23/101 (22%), Positives = 36/101 (35%), Gaps = 24/101 (23%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
+ V + QK L L L S+ NQ+ II+ S E L +++ + G HA
Sbjct: 237 YAFVEER---QK--LHCLNTLFSKLQINQA-IIFCNSTNRVELLAKKITDLGYSCYYSHA 290
Query: 272 KL---------------ESNVSIA---FGLGIDKPNVRFVI 294
++ + + GID V VI
Sbjct: 291 RMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVI 331
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene
regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19
c.37.1.19 PDB: 1xtj_A* 1xtk_A
Length = 391
Score = 33.7 bits (78), Expect = 0.072
Identities = 33/162 (20%), Positives = 63/162 (38%), Gaps = 29/162 (17%)
Query: 155 DFRPDYQYLSILKTMFPDVPILGLTATATTKVMLDVQKMLQ--IEDCVVIKAPFNRPNL- 211
D R D Q I + + ++ +AT + ++ +K +Q +E V + L
Sbjct: 169 DMRRDVQ--EIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQ 226
Query: 212 -FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 270
+Y V++K + L +L D++ NQ +I+ S++ C L + L + A H
Sbjct: 227 QYY-VKLKDNEKNRKLFDLLDVLEF---NQV-VIFVKSVQRCIALAQLLVEQNFPAIAIH 281
Query: 271 AKL---------------ESNVSIA---FGLGIDKPNVRFVI 294
+ + + +A FG G+D V
Sbjct: 282 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 323
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein;
HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19
c.37.1.19 PDB: 2fzl_A*
Length = 472
Score = 33.3 bits (76), Expect = 0.094
Identities = 35/210 (16%), Positives = 60/210 (28%), Gaps = 54/210 (25%)
Query: 2 LPNYPWSDRVRSVLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPTDYPWSDRVRSVLKS 61
+P+ + R + FR + I + + I D +
Sbjct: 42 VPHAKFDSRSG-----TYRALAFRYRDI----IEYFESNGIEF--VDNAADPIPTPYFDA 90
Query: 62 KFNLTDFRPNQLAAINIALLKKDAIIIMPTG-----------KLLKKKKICLMTESSSLK 110
+ +L R Q A+ L+ K I++PTG L + ++ + +
Sbjct: 91 EISL---RDYQEKALERWLVDKRGCIVLPTGSGKTHVAMAAINELSTPTLIVVPTLALAE 147
Query: 111 --------------LLYVSPEKLAKSKSFMTKLQKMYKAGCLAR-----IAIDEVHCCSS 151
+ K K + T Y + DEVH +
Sbjct: 148 QWKERLGIFGEEYVGEFSGRIKELKPLTVST-YDSAYVNAEKLGNRFMLLIFDEVHHLPA 206
Query: 152 WGHDFRPDYQYLSILKTMFPDVPILGLTAT 181
Y+ I + M LGLTAT
Sbjct: 207 --------ESYVQIAQ-MSIAPFRLGLTAT 227
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis,
cell cycle, nucleus, phosph RNA-binding, ATP-binding,
helicase, hydrolase; 3.50A {Homo sapiens}
Length = 414
Score = 32.9 bits (76), Expect = 0.12
Identities = 26/101 (25%), Positives = 40/101 (39%), Gaps = 22/101 (21%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
FY + ++ K LD L DL Q+ +I+ + ++ + L E++ R VSA H
Sbjct: 257 FY-INVEREEWK--LDTLCDLYETLTITQA-VIFINTRRKVDWLTEKMHARDFTVSAMHG 312
Query: 272 KLE---------------SNVSIA---FGLGIDKPNVRFVI 294
++ S V I GID V VI
Sbjct: 313 DMDQKERDVIMREFRSGSSRVLITTDLLARGIDVQQVSLVI 353
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation,
rRNA processing, mRNA splicing, mRNA transport; HET:
ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB:
2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B
2zu6_A
Length = 410
Score = 32.9 bits (76), Expect = 0.12
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 4/63 (6%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
F+ V ++ K D L DL Q+ +I+ + ++ + L E++R VS+ H
Sbjct: 253 FF-VAVEREEWK--FDTLCDLYDTLTITQA-VIFCNTKRKVDWLTEKMREANFTVSSMHG 308
Query: 272 KLE 274
+
Sbjct: 309 DMP 311
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein,
translation; 2.50A {Saccharomyces cerevisiae} SCOP:
c.37.1.19 PDB: 2vso_A* 2vsx_A*
Length = 394
Score = 32.5 bits (75), Expect = 0.19
Identities = 26/101 (25%), Positives = 41/101 (40%), Gaps = 22/101 (21%)
Query: 212 FYEVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 271
FY V ++ K + L DL Q+ +I+ + ++ E+L +LRN VSA ++
Sbjct: 236 FY-VNVEEEEYK--YECLTDLYDSISVTQA-VIFCNTRRKVEELTTKLRNDKFTVSAIYS 291
Query: 272 KLE---------------SNVSIA---FGLGIDKPNVRFVI 294
L S + I+ GID V VI
Sbjct: 292 DLPQQERDTIMKEFRSGSSRILISTDLLARGIDVQQVSLVI 332
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of
[NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET:
APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB:
3vti_A
Length = 761
Score = 32.0 bits (73), Expect = 0.24
Identities = 20/68 (29%), Positives = 25/68 (36%), Gaps = 22/68 (32%)
Query: 224 DCLDELADLMSRRFRN----------QSGIIYT-------TSIKE---CEDLREELRNRG 263
DCL EL D RR+R + II TS+K CE E +
Sbjct: 116 DCLRELKDPKDRRYRYPFINCTNCGPRFSIIEDIPYDRAKTSMKVFPMCEKCSREYHDPH 175
Query: 264 LRVSAYHA 271
R +HA
Sbjct: 176 DR--RFHA 181
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 31.1 bits (69), Expect = 0.27
Identities = 10/30 (33%), Positives = 15/30 (50%), Gaps = 12/30 (40%)
Query: 96 KK--KKICLMTESSSLKLLYVSPEK---LA 120
K+ KK+ +SLK LY + + LA
Sbjct: 19 KQALKKL-----QASLK-LY-ADDSAPALA 41
Score = 31.1 bits (69), Expect = 0.27
Identities = 7/19 (36%), Positives = 9/19 (47%), Gaps = 1/19 (5%)
Query: 164 SILKTMFPD-VPILGLTAT 181
+ LK D P L + AT
Sbjct: 27 ASLKLYADDSAPALAIKAT 45
Score = 28.0 bits (61), Expect = 2.8
Identities = 11/40 (27%), Positives = 14/40 (35%), Gaps = 14/40 (35%)
Query: 105 ESSSLKLLYVSPEKLAKSKSFMTKLQKMYKAGCLARIAID 144
E +LK KL S L K+Y +AI
Sbjct: 18 EKQALK-------KLQAS------L-KLYADDSAPALAIK 43
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H
RNA-binding helicase, innate immunity, IFIH1, S
genomics; 1.60A {Homo sapiens}
Length = 216
Score = 29.8 bits (67), Expect = 0.82
Identities = 34/194 (17%), Positives = 56/194 (28%), Gaps = 49/194 (25%)
Query: 25 RPNQLAAINIALLKKDAIIIMPT--------------DYPWSDRVRSVLKSKFNLTD--- 67
RP Q+ AL K+ II +PT + K L +
Sbjct: 35 RPYQMEVAQPALEGKNIIICLPTGSGKTRVAVYIAKDHLDKKKKASEPGKVIV-LVNKVL 93
Query: 68 ---------FRPNQLAAINIALLKKDAIIIMPTGKLLKKKKICLMTESSSLKLLYVSPEK 118
F+P + L D + + +++K I + T +
Sbjct: 94 LVEQLFRKEFQPFLKKWYRVIGLSGDTQLKISFPEVVKSCDIIIST-----------AQI 142
Query: 119 LAKS-KSFMTKLQKMYKAGCLARIAIDEVHCC---SSWG------HDFRPDYQYLSILKT 168
L S + + + I IDE H + + + L
Sbjct: 143 LENSLLNLENGEDAGVQLSDFSLIIIDECHHTNKEAVYNNIMRHYLMQKLKNNRLKKENK 202
Query: 169 MFPDVP-ILGLTAT 181
+P ILGLTA+
Sbjct: 203 PVIPLPQILGLTAS 216
>2jgn_A DBX, DDX3, ATP-dependent RNA helicase DDX3X; phosphorylation,
nucleotide-binding, hydrolase, RNA-binding, ATP-binding,
DNA-binding, nuclear protein; 1.91A {Homo sapiens}
Length = 185
Score = 29.1 bits (66), Expect = 1.3
Identities = 16/86 (18%), Positives = 34/86 (39%), Gaps = 18/86 (20%)
Query: 227 DELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE------------ 274
L DL++ ++ +++ + K + L + L + G ++ H
Sbjct: 34 SFLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFR 93
Query: 275 ---SNVSIAFGL---GIDKPNVRFVI 294
S + +A + G+D NV+ VI
Sbjct: 94 SGKSPILVATAVAARGLDISNVKHVI 119
>2p6n_A ATP-dependent RNA helicase DDX41; DEAD, structural genomics,
structural genomic consortium, SGC, hydrolase; 2.60A
{Homo sapiens}
Length = 191
Score = 28.7 bits (65), Expect = 1.7
Identities = 15/80 (18%), Positives = 34/80 (42%), Gaps = 18/80 (22%)
Query: 243 IIYTTSIKECEDLREELRNRGLRVSAYHAKLE---------------SNVSIAFGL---G 284
+I+ + + + E L +G+ A H + +V +A + G
Sbjct: 58 LIFAEKKADVDAIHEYLLLKGVEAVAIHGGKDQEERTKAIEAFREGKKDVLVATDVASKG 117
Query: 285 IDKPNVRFVIHHCLSKSMEN 304
+D P ++ VI++ + + +EN
Sbjct: 118 LDFPAIQHVINYDMPEEIEN 137
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural
genomics, joint center for structural genomics, JCSG;
HET: CIT; 1.85A {Parabacteroides distasonis}
Length = 262
Score = 29.0 bits (65), Expect = 2.1
Identities = 7/70 (10%), Positives = 22/70 (31%), Gaps = 13/70 (18%)
Query: 213 YEVRIKPAAQKDCLDELADL-----------MSRRFRNQSGIIYTTSIKECEDLREELRN 261
Y + P + LD+ +L + + ++++E +
Sbjct: 17 YSFHLFPLTE--ALDKTQELGLKYIEIYPGHKLGGKWGDKVFDFNLDAQTQKEIKELAAS 74
Query: 262 RGLRVSAYHA 271
+G+++
Sbjct: 75 KGIKIVGTGV 84
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II,
11231J, structur genomics, protein structure
initiative; 2.20A {Bacteroides fragilis}
Length = 304
Score = 28.9 bits (65), Expect = 2.1
Identities = 4/34 (11%), Positives = 11/34 (32%), Gaps = 4/34 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLK 60
+A + ++ D ++ PT +
Sbjct: 58 FVATSQAVIEEQPDGVMFAPTV---PQYTKGFTD 88
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation
termination, binding, hydrolase, membrane, mRNA
transport; 2.80A {Schizosaccharomyces pombe}
Length = 508
Score = 29.1 bits (66), Expect = 2.3
Identities = 20/102 (19%), Positives = 33/102 (32%), Gaps = 24/102 (23%)
Query: 212 FYEVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 270
Y + + K + L EL L++ II+ E++ + G V+
Sbjct: 334 LY-MDCQSEEHKYNVLVELYGLLTI----GQSIIFCKKKDTAEEIARRMTADGHTVACLT 388
Query: 271 AKLE---------------SNVSIAFGL---GIDKPNVRFVI 294
LE S V + + GID V V+
Sbjct: 389 GNLEGAQRDAIMDSFRVGTSKVLVTTNVIARGIDVSQVNLVV 430
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition
domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus
fulgidus} SCOP: c.37.1.19
Length = 237
Score = 28.5 bits (64), Expect = 2.5
Identities = 11/52 (21%), Positives = 19/52 (36%), Gaps = 8/52 (15%)
Query: 46 PTDYPWSDRVRS-----VLKSKFNLTDFRPNQLAAINIALLKKDAIIIMPTG 92
+ D ++ +L R Q A+ L+ K I++PTG
Sbjct: 70 SNGIEFVDNAADPIPTPYFDAEISL---RDYQEKALERWLVDKRGCIVLPTG 118
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore
complex, nucleocytoplasmic trans mRNA export, protein
interaction, beta-propeller; HET: ADP; 3.19A {Homo
sapiens}
Length = 479
Score = 28.8 bits (65), Expect = 2.5
Identities = 13/64 (20%), Positives = 25/64 (39%), Gaps = 6/64 (9%)
Query: 212 FYEVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 270
+Y V +K L L ++ Q+ +I+ + K L EL G +V+
Sbjct: 310 YY-VLCSSRDEKFQALCNLYGAITI---AQA-MIFCHTRKTASWLAAELSKEGHQVALLS 364
Query: 271 AKLE 274
++
Sbjct: 365 GEMM 368
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA
dependent ATPase, mRNA export, nucleocytoplasmic
transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens}
PDB: 3ews_A* 3g0h_A* 3fhc_B
Length = 412
Score = 28.7 bits (65), Expect = 2.7
Identities = 13/66 (19%), Positives = 25/66 (37%), Gaps = 6/66 (9%)
Query: 212 FYEVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 270
+Y V +K L L ++ Q+ +I+ + K L EL G +V+
Sbjct: 243 YY-VLCSSRDEKFQALCNLYGAITI---AQA-MIFCHTRKTASWLAAELSKEGHQVALLS 297
Query: 271 AKLESN 276
++
Sbjct: 298 GEMMVE 303
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc,
PSI-biology, structural genomics; 1.91A {Legionella
pneumophila subsp}
Length = 297
Score = 27.8 bits (62), Expect = 4.8
Identities = 6/34 (17%), Positives = 8/34 (23%), Gaps = 4/34 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLK 60
Q+ I AL I L+
Sbjct: 50 QVQFIESALATYPSGIATTIPS---DTAFSKSLQ 80
>3iyn_N Protein IIIA, peripentonal hexon-associated protein; cryoem, 3D
reconstruction, FULL-ATOM model interaction network,
capsid protein, hexon protein; 3.60A {Human adenovirus
5}
Length = 585
Score = 27.9 bits (61), Expect = 5.4
Identities = 14/84 (16%), Positives = 34/84 (40%), Gaps = 4/84 (4%)
Query: 1 MLPNYPWSDRVRSVLK-SKFNLTDFRPNQLAAINIALLKKDAIIIMPTDYPWSDRVRSVL 59
+ W + ++ + N FR A A+L+ ++ P ++V +++
Sbjct: 21 LNSTDDWRQVMDRIMSLTARNPDAFRQQPQANRLSAILEA---VVPARANPTHEKVLAIV 77
Query: 60 KSKFNLTDFRPNQLAAINIALLKK 83
+ RP++ + ALL++
Sbjct: 78 NALAENRAIRPDEAGLVYDALLQR 101
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod
target 11229F, transport protein, structural genomics;
2.02A {Bacillus halodurans c-125}
Length = 305
Score = 27.4 bits (61), Expect = 5.9
Identities = 6/35 (17%), Positives = 11/35 (31%), Gaps = 4/35 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLKS 61
Q+ + A+ K I I D + +
Sbjct: 50 QITVLEQAIAKNPAGIAISAID---PVELTDTINK 81
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics,
oxidoreductase, PSI-2, protein structure initiative;
1.90A {Novosphingobium aromaticivorans DSM12444}
Length = 319
Score = 27.4 bits (61), Expect = 6.2
Identities = 5/18 (27%), Positives = 6/18 (33%)
Query: 253 EDLREELRNRGLRVSAYH 270
E L L + VS
Sbjct: 177 ESLHYSLLKYEIGVSVLC 194
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic
component, PSI- 11023L, structural genomics, protein
structure initiative; HET: BDR; 1.90A {Hahella
chejuensis}
Length = 276
Score = 27.3 bits (61), Expect = 6.3
Identities = 6/35 (17%), Positives = 16/35 (45%), Gaps = 5/35 (14%)
Query: 28 QLAAINIALLKK--DAIIIMPTDYPWSDRVRSVLK 60
Q+ ++ L + DA+I+ P ++ + +
Sbjct: 47 QIQILSYHLSQAPPDALILAPNS---AEDLTPSVA 78
>3brs_A Periplasmic binding protein/LACI transcriptional; structural
genomics, protein structure initiative; 2.00A
{Clostridium phytofermentans}
Length = 289
Score = 27.3 bits (61), Expect = 6.6
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLKS 61
Q I A+ +K D I++ D ++ K
Sbjct: 54 QNELIEEAIKRKPDVILLAAAD---YEKTYDAAKE 85
>1tjy_A Sugar transport protein; protein-ligand complex, signaling
protein; HET: PAV; 1.30A {Salmonella typhimurium} SCOP:
c.93.1.1 PDB: 1tm2_A 3t95_A* 3ejw_A*
Length = 316
Score = 27.4 bits (61), Expect = 6.6
Identities = 9/34 (26%), Positives = 15/34 (44%), Gaps = 4/34 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLK 60
Q+ +N + + DAII+ D + LK
Sbjct: 49 QVQLVNNFVNQGYDAIIVSAVS---PDGLCPALK 79
>3d02_A Putative LACI-type transcriptional regulator; periplasmic
sugar-binding protein, structura genomics; HET: MSE
GOL; 1.30A {Klebsiella pneumoniae subsp}
Length = 303
Score = 27.4 bits (61), Expect = 7.2
Identities = 11/34 (32%), Positives = 18/34 (52%), Gaps = 4/34 (11%)
Query: 28 QLAAINIALLKK-DAIIIMPTDYPWSDRVRSVLK 60
Q+ I + +K DAI I+P D ++ + V K
Sbjct: 50 QVKIIEDLIARKVDAITIVPND---ANVLEPVFK 80
>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell
adhesion, DI mutation, glycoprotein, HOST-virus
interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo
sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*
Length = 690
Score = 27.4 bits (60), Expect = 7.8
Identities = 13/41 (31%), Positives = 23/41 (56%)
Query: 253 EDLREELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFV 293
+D ++N G +++ KL SN+ I FG +DKP ++
Sbjct: 125 KDDLWSIQNLGTKLATQMRKLTSNLRIGFGAFVDKPVSPYM 165
>3fys_A Protein DEGV; fatty acid-binding, EDD fold, fatty acid-binding
protein; HET: PLM; 2.50A {Bacillus subtilis}
Length = 315
Score = 27.2 bits (61), Expect = 8.3
Identities = 9/48 (18%), Positives = 21/48 (43%)
Query: 215 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR 262
+R + A + L + S+ ++ +I+ +E + EEL +
Sbjct: 237 IRTRKKAISRIYELLDEDASKGLPMRAAVIHANREEEAAKIIEELSAK 284
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide
binding, hydrogenase maturation factor transferase; HET:
ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A*
3ttf_A* 3ttd_A 3tsq_A
Length = 657
Score = 27.0 bits (60), Expect = 8.9
Identities = 6/15 (40%), Positives = 8/15 (53%)
Query: 224 DCLDELADLMSRRFR 238
CL E+ RR+R
Sbjct: 22 ACLAEMNTPGERRYR 36
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A
{Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Length = 392
Score = 26.8 bits (60), Expect = 9.6
Identities = 14/64 (21%), Positives = 25/64 (39%), Gaps = 10/64 (15%)
Query: 255 LREELRNRGLRVSAYHAKLESNVSIAFGL--GIDKPNVRFVIHHCLSKSMENFYQVSIAF 312
+R + GL V A + S + A G+D+ +R ++ Y V +
Sbjct: 282 MRAGVTAMGLSVWAASDSIASPTTTAVRTPDGVDEKALR--------QAARARYGVVFSS 333
Query: 313 GLGK 316
G G+
Sbjct: 334 GRGE 337
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.324 0.137 0.405
Gapped
Lambda K H
0.267 0.0656 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,937,218
Number of extensions: 292837
Number of successful extensions: 1102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1090
Number of HSP's successfully gapped: 60
Length of query: 323
Length of database: 6,701,793
Length adjustment: 94
Effective length of query: 229
Effective length of database: 4,077,219
Effective search space: 933683151
Effective search space used: 933683151
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.5 bits)
S2: 57 (25.9 bits)