BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4494
(234 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|321475158|gb|EFX86121.1| RecQ1-like protein [Daphnia pulex]
Length = 624
Score = 244 bits (624), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 116/219 (52%), Positives = 147/219 (67%), Gaps = 32/219 (14%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
S+ F ++PN+ +Y+VRIKP+ QK+C+DEL L++ RF QSGII
Sbjct: 264 SLVFKASFNRPNL--------------YYEVRIKPSTQKECIDELVQLLTNRFHGQSGII 309
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
YTTS+K+C+ L ELR + RV++YHA LE +IAFG+GID
Sbjct: 310 YTTSVKDCDQLASELRQQKCRVASYHASLEPADRTEVHTGWRENRYQAVVATIAFGMGID 369
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH +SKSMENFYQESGRAGRD A CI+Y+RL D+F+LS+MVF +QTGL N
Sbjct: 370 KPDVRFVIHHSISKSMENFYQESGRAGRDDLQACCIVYWRLSDLFRLSTMVFTEQTGLRN 429
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY + +YCLD RCRR IIAS+FDE W + C MCDHC
Sbjct: 430 LYAMAAYCLDPERCRREIIASHFDERWESSSCNKMCDHC 468
>gi|193606281|ref|XP_001943152.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Acyrthosiphon pisum]
Length = 599
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 111/192 (57%), Positives = 143/192 (74%), Gaps = 19/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V+ KP +K C+DELA L+ +F+NQSGIIYTTSIK+CE LR++L+ G RV +YHA
Sbjct: 282 YYEVKWKPEGKK-CVDELASLLKNKFKNQSGIIYTTSIKDCESLRKDLKEHGCRVGSYHA 340
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+LE + +IAFGLGIDKPNVRFVIHH LSKS+ENFYQESGRAG
Sbjct: 341 QLEGPLRSKVHRKWLNDEYQAVVATIAFGLGIDKPNVRFVIHHTLSKSIENFYQESGRAG 400
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + C+LYY+L DVFKLS+MVF QTGL NLY+I+ YCL+ CRR +I+++FDE+W
Sbjct: 401 RDGKPSTCLLYYKLSDVFKLSTMVFTTQTGLPNLYSIIKYCLNVKECRRKLISTHFDESW 460
Query: 211 SDTECRGMCDHC 222
+C MCD+C
Sbjct: 461 ESIDCDAMCDNC 472
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 52/97 (53%), Gaps = 24/97 (24%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR------IKPAAQKDC-- 62
W YQ +IAFGLGIDKPNVRFVIHH LSKS+ENFYQ KP+ C
Sbjct: 354 WLNDEYQAVVATIAFGLGIDKPNVRFVIHHTLSKSIENFYQESGRAGRDGKPST---CLL 410
Query: 63 ---LDELADLMSRRFRNQSG-------IIYTTSIKEC 89
L ++ L + F Q+G I Y ++KEC
Sbjct: 411 YYKLSDVFKLSTMVFTTQTGLPNLYSIIKYCLNVKEC 447
>gi|322779042|gb|EFZ09441.1| hypothetical protein SINV_80478 [Solenopsis invicta]
Length = 596
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 149/206 (72%), Gaps = 20/206 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KPA ++ CL + +L+ RF +SGIIYTT+IK+ E L +LR RG++V YHA
Sbjct: 287 YYEVRRKPAEKETCLAMMENLLKTRFNGKSGIIYTTTIKDAEQLTSDLRGRGIKVGCYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE++ +IAFGLGIDKP+VRFVIHHCLSKSMENFYQESGRAG
Sbjct: 347 MLEADYRSEVYSKWMSGKYQAVIATIAFGLGIDKPDVRFVIHHCLSKSMENFYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + C++ YRL D FKLS+MVF + GL NLY +++YCLD+T CRR++IA++F+E W
Sbjct: 407 RDGKKSVCLVLYRLADTFKLSTMVFQDKVGLQNLYKMLAYCLDRTSCRRSLIATHFEENW 466
Query: 211 SDTECRGMCDHCRGGR--RDAKRVDV 234
T+C MCDHCR + R+AKR+DV
Sbjct: 467 KVTDCAEMCDHCRKPKDDRNAKRIDV 492
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VRFVIHHCLSKSMENFYQ
Sbjct: 360 WMSGKYQAVIATIAFGLGIDKPDVRFVIHHCLSKSMENFYQ 400
>gi|238859683|ref|NP_001154966.1| RecQ protein 1 [Nasonia vitripennis]
Length = 598
Score = 239 bits (610), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 110/192 (57%), Positives = 140/192 (72%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP+ ++ CL+ + L+ RF +SGIIYTT+IKE E L +LR RGLR+ YHA
Sbjct: 292 FYEVRRKPSDKEACLEMIVSLLKNRFEGKSGIIYTTTIKESEQLTTDLRARGLRIGCYHA 351
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE +IAFGLGIDKP+VRFVIHHCLSKSMEN YQESGRAG
Sbjct: 352 MLEPEYRTKVYSKWFSGEYQAVVATIAFGLGIDKPDVRFVIHHCLSKSMENLYQESGRAG 411
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ ++CIL YRL DVFKLS+MVF + GL NLY I++YCLDQ+ CRR++IA++F+E W
Sbjct: 412 RDGEKSYCILLYRLMDVFKLSTMVFQDKVGLQNLYKILNYCLDQSSCRRSLIATHFEETW 471
Query: 211 SDTECRGMCDHC 222
+ ++C+ MCDHC
Sbjct: 472 AKSDCKEMCDHC 483
Score = 66.2 bits (160), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VRFVIHHCLSKSMEN YQ
Sbjct: 365 WFSGEYQAVVATIAFGLGIDKPDVRFVIHHCLSKSMENLYQ 405
>gi|383853399|ref|XP_003702210.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Megachile rotundata]
Length = 597
Score = 237 bits (605), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 147/204 (72%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP+ + CL + +L+ RF+++SGIIYTT+IK+ E L ELR+ G++V YHA
Sbjct: 291 FYEVRRKPSDKSTCLAMIENLLKNRFKDKSGIIYTTTIKDAEQLTTELRSLGIKVGCYHA 350
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE +IAFGLGIDKP+VRFVIHHC+SKSMENFYQESGRAG
Sbjct: 351 MLEPEYRSEVYSKWISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAG 410
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + CI+ YRLPDVFKLS+MVF + GL NLY +++YCLD + CRR++IA++F+E W
Sbjct: 411 RDGKKSACIVLYRLPDVFKLSTMVFQDKVGLQNLYKMLAYCLDLSSCRRSLIATHFEETW 470
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+ ++C MCDHCR ++ K V++
Sbjct: 471 TKSDCAEMCDHCRKP-KEKKEVNI 493
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VRFVIHHC+SKSMENFYQ
Sbjct: 364 WISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQ 404
>gi|332027185|gb|EGI67277.1| ATP-dependent DNA helicase Q1 [Acromyrmex echinatior]
Length = 599
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 145/204 (71%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KPA ++ CL + +L+ RF +SGIIYTT+IK+ E L +LR RG++ YHA
Sbjct: 291 YYEVRRKPADKETCLAMIENLLKNRFNGKSGIIYTTTIKDAEQLTTDLRGRGIKAGCYHA 350
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE+N +IAFGLGIDKP+VRFVIHHC+SKSMENFYQESGRAG
Sbjct: 351 MLEANYRSEVYSKWMSGKYQVVVATIAFGLGIDKPDVRFVIHHCVSKSMENFYQESGRAG 410
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + C++ YRL D+FKLS+MVF + GL NLY +++YCLD+T CRR++IA++F+E W
Sbjct: 411 RDGKKSVCLVLYRLADIFKLSTMVFQDKVGLQNLYKVLAYCLDETSCRRSLIATHFEENW 470
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+ +C MCDHCR K++DV
Sbjct: 471 KENDCAEMCDHCRKSVSVRKQIDV 494
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQV +IAFGLGIDKP+VRFVIHHC+SKSMENFYQ
Sbjct: 364 WMSGKYQVVVATIAFGLGIDKPDVRFVIHHCVSKSMENFYQ 404
>gi|242022338|ref|XP_002431597.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
gi|212516905|gb|EEB18859.1| ATP-dependent DNA helicase Q1, putative [Pediculus humanus
corporis]
Length = 652
Score = 236 bits (602), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 142/193 (73%), Gaps = 18/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V +KP++Q + LD L + + +F N+SGIIYTT+IKECE+L +ELR RG++ YHA
Sbjct: 278 YYEVVLKPSSQSENLDLLENWLKNKFSNKSGIIYTTAIKECEELTKELRKRGIKAGVYHA 337
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ V ++AFG+GIDKP+VRFVIHH LSKSMENFYQESGRAG
Sbjct: 338 MLDAEVRSKMHTKWMSNEYQVIVATVAFGMGIDKPDVRFVIHHSLSKSMENFYQESGRAG 397
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ +HCI+ +RL DVFKLS+MVF QQ GL NLY+++++CL+ CRR++IA +FDE W
Sbjct: 398 RDGKNSHCIVMFRLADVFKLSTMVFTQQKGLENLYSMLNFCLNNDTCRRSLIAEHFDEVW 457
Query: 211 SDTECRGMCDHCR 223
+ C MCDHC+
Sbjct: 458 NSNFCNKMCDHCK 470
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 35/41 (85%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ YQV ++AFG+GIDKP+VRFVIHH LSKSMENFYQ
Sbjct: 351 WMSNEYQVIVATVAFGMGIDKPDVRFVIHHSLSKSMENFYQ 391
>gi|340717015|ref|XP_003396985.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like
[Bombus terrestris]
Length = 596
Score = 233 bits (593), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 148/204 (72%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP ++ CL + +L+ RF+++SGIIYTT+IK+ E L +LR GL+V YHA
Sbjct: 290 FYEVRRKPTDKETCLAMIENLLKNRFKDKSGIIYTTTIKDAEQLTTDLRALGLKVGCYHA 349
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE++ +IAFGLGIDKP+VRFVIHHC+SKSMENFYQESGRAG
Sbjct: 350 MLEADYRSEVYSKWISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAG 409
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ A I+ YRL DVFKLS+MVF + GL NLY ++ YCLDQT CRR++IA +F+E+W
Sbjct: 410 RDGKKAVSIVLYRLLDVFKLSTMVFQDKVGLQNLYKMLEYCLDQTSCRRSLIAVHFEESW 469
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+ ++C MCDHCR +++K+V++
Sbjct: 470 TRSDCAEMCDHCRKP-KESKQVNI 492
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VRFVIHHC+SKSMENFYQ
Sbjct: 363 WISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQ 403
>gi|350408702|ref|XP_003488482.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Bombus impatiens]
Length = 602
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 146/204 (71%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP + CL + +L+ RF+++SGIIYTT+IK+ E L +LR GL+V YHA
Sbjct: 296 FYEVRRKPTDKDTCLAMIENLLKNRFKDKSGIIYTTTIKDAEQLTTDLRALGLKVGCYHA 355
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE++ +IAFGLGIDKP+VRFVIHHC+SKSMENFYQESGRAG
Sbjct: 356 MLEADYRSEVYSKWISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQESGRAG 415
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ A I+ YRL DVFKLS+MVF + GL NLY ++ YCLDQT CRR++IA +F+E+W
Sbjct: 416 RDGKKAVSIVLYRLLDVFKLSTMVFQDKVGLQNLYKMLEYCLDQTSCRRSLIAVHFEESW 475
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+ +C MCDHCR +++K+V++
Sbjct: 476 TRNDCAEMCDHCRKP-KESKQVNI 498
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/41 (73%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VRFVIHHC+SKSMENFYQ
Sbjct: 369 WISGKYQAVVATIAFGLGIDKPDVRFVIHHCISKSMENFYQ 409
>gi|380018171|ref|XP_003693009.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1-like
[Apis florea]
Length = 596
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 142/193 (73%), Gaps = 18/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP + CL + +L+ RF+++SGIIYTT+IK+ E L +LR GL+V YHA
Sbjct: 290 FYEVRRKPTDKDTCLAMIENLLKNRFKDKSGIIYTTTIKDAEQLTTDLRAVGLKVGCYHA 349
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE++ +IAFGLGIDKP+VR+VIHHC+SKSME+FYQESGRAG
Sbjct: 350 MLEADYRSEVYSKWISGKYQAVVATIAFGLGIDKPDVRYVIHHCISKSMESFYQESGRAG 409
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + CI+ Y+L D+FKLS+MVF + GL NLY +++YCLDQT CRR++IA++F+E+W
Sbjct: 410 RDGKKSMCIVLYKLQDIFKLSTMVFQDKVGLQNLYKMLAYCLDQTSCRRSLIATHFEESW 469
Query: 211 SDTECRGMCDHCR 223
+ ++C MCDHCR
Sbjct: 470 TRSDCAEMCDHCR 482
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/41 (68%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VR+VIHHC+SKSME+FYQ
Sbjct: 363 WISGKYQAVVATIAFGLGIDKPDVRYVIHHCISKSMESFYQ 403
>gi|328789066|ref|XP_396807.4| PREDICTED: ATP-dependent DNA helicase Q1-like [Apis mellifera]
Length = 596
Score = 229 bits (583), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 148/204 (72%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP + CL + +L+ RF+++SGIIYTT+IK+ E L +LR GL+V YHA
Sbjct: 290 FYEVRRKPTDKDTCLAMIENLLKNRFKDKSGIIYTTTIKDAEQLTTDLRAVGLKVGCYHA 349
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE++ +IAFGLGIDKP+VR+VIHH +SKSME+FYQESGRAG
Sbjct: 350 MLEADYRSEVYSKWISGKYQAVVATIAFGLGIDKPDVRYVIHHSISKSMESFYQESGRAG 409
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + CI+ Y+L D+FKLS+MVF + GL NLY +++YCLDQT CRR++IA++F+E+W
Sbjct: 410 RDGKKSMCIVLYKLQDIFKLSTMVFQDKVGLQNLYKMLAYCLDQTSCRRSLIATHFEESW 469
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+ ++C MCDHCR +D K++++
Sbjct: 470 TRSDCAEMCDHCR-KLKDNKQINI 492
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ +IAFGLGIDKP+VR+VIHH +SKSME+FYQ
Sbjct: 363 WISGKYQAVVATIAFGLGIDKPDVRYVIHHSISKSMESFYQ 403
>gi|405975904|gb|EKC40435.1| ATP-dependent DNA helicase Q1 [Crassostrea gigas]
Length = 822
Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats.
Identities = 97/179 (54%), Positives = 128/179 (71%), Gaps = 7/179 (3%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
++ K + K+ +D + L+ RRF NQSGIIY S KE +D+ +L+ RG++ YHA L
Sbjct: 403 IKQKSSEYKEAMDNIQQLIQRRFTNQSGIIYCLSRKESQDVTMDLQQRGIKTGCYHADLS 462
Query: 112 SN-------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+ AFG+GIDKPNVRFVIH+ +SKSMEN YQESGRAGRD Q +HCI+YYRL
Sbjct: 463 GQERSRVVVATTAFGMGIDKPNVRFVIHYSVSKSMENLYQESGRAGRDNQKSHCIVYYRL 522
Query: 165 PDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
D+F+ S MVF +QTGL NLY I++YC D TRCRR++IA +F E+W + C+ MCDHC+
Sbjct: 523 ADIFRQSCMVFTEQTGLDNLYGIMAYCTDLTRCRRSVIAQHFGESWDRSHCKEMCDHCQ 581
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 47/129 (36%), Positives = 62/129 (48%), Gaps = 23/129 (17%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQV--RIKPAAQKD-CL--DELADL 69
R+ + AFG+GIDKPNVRFVIH+ +SKSMEN YQ R QK C+ LAD+
Sbjct: 466 RSRVVVATTAFGMGIDKPNVRFVIHYSVSKSMENLYQESGRAGRDNQKSHCIVYYRLADI 525
Query: 70 MSRR---FRNQSGIIYTTSIKE-CEDLREELRNRGLRVSAYHAKLESNVSIAFGLGIDKP 125
+ F Q+G+ I C DL R+ V A H FG D+
Sbjct: 526 FRQSCMVFTEQTGLDNLYGIMAYCTDLTRCRRS----VIAQH----------FGESWDRS 571
Query: 126 NVRFVIHHC 134
+ + + HC
Sbjct: 572 HCKEMCDHC 580
>gi|261335969|emb|CBH09254.1| putative RecQ Helicase [Heliconius melpomene]
Length = 632
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 277 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 336
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 337 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 396
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 397 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 456
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 457 GDTDCNKMCDVCENSNTTTREISL 480
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 350 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 390
>gi|261870790|gb|ACY02253.1| helicase [Heliconius pachinus]
Length = 302
Score = 213 bits (542), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDXCENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261870782|gb|ACY02249.1| helicase [Heliconius cydno]
Length = 302
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDXCENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261870792|gb|ACY02254.1| helicase [Heliconius pachinus]
Length = 302
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDVCENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261870794|gb|ACY02255.1| helicase [Heliconius pachinus]
gi|261870798|gb|ACY02257.1| helicase [Heliconius pachinus]
Length = 302
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDICENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261887713|gb|ACY05339.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSXGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|345095781|gb|AEN67432.1| helicase [Heliconius numata aurora]
Length = 245
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDXC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|261870780|gb|ACY02248.1| helicase [Heliconius cydno]
Length = 302
Score = 212 bits (540), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDVCENSNTXTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261870784|gb|ACY02250.1| helicase [Heliconius cydno]
gi|261870788|gb|ACY02252.1| helicase [Heliconius cydno]
Length = 302
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDVCENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|345095759|gb|AEN67421.1| helicase [Heliconius numata arcuella]
gi|345095793|gb|AEN67438.1| helicase [Heliconius numata aurora]
gi|345095805|gb|AEN67444.1| helicase [Heliconius numata silvana]
gi|345095821|gb|AEN67452.1| helicase [Heliconius numata silvana]
gi|345095829|gb|AEN67456.1| helicase [Heliconius numata silvana]
Length = 245
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKXRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|261887709|gb|ACY05337.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|261887705|gb|ACY05335.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|261887715|gb|ACY05340.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|405116395|gb|AFR91629.1| helicase, partial [Heliconius cydno weymeri]
gi|405116415|gb|AFR91639.1| helicase, partial [Heliconius cydno weymeri]
Length = 238
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 10 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 69
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 70 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 129
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 130 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 189
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 190 GDTDCNKMCDVCENSNTTTREISL 213
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 83 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 123
>gi|405116385|gb|AFR91624.1| helicase, partial [Heliconius cydno weymeri]
gi|405116391|gb|AFR91627.1| helicase, partial [Heliconius cydno weymeri]
gi|405116393|gb|AFR91628.1| helicase, partial [Heliconius cydno weymeri]
gi|405116397|gb|AFR91630.1| helicase, partial [Heliconius cydno weymeri]
gi|405116403|gb|AFR91633.1| helicase, partial [Heliconius cydno weymeri]
gi|405116405|gb|AFR91634.1| helicase, partial [Heliconius cydno weymeri]
gi|405116411|gb|AFR91637.1| helicase, partial [Heliconius cydno weymeri]
gi|405116413|gb|AFR91638.1| helicase, partial [Heliconius cydno weymeri]
gi|405116417|gb|AFR91640.1| helicase, partial [Heliconius cydno weymeri]
gi|405116421|gb|AFR91642.1| helicase, partial [Heliconius cydno weymeri]
gi|405116423|gb|AFR91643.1| helicase, partial [Heliconius cydno cydnides]
gi|405116425|gb|AFR91644.1| helicase, partial [Heliconius cydno cydnides]
gi|405116427|gb|AFR91645.1| helicase, partial [Heliconius cydno cydnides]
gi|405116429|gb|AFR91646.1| helicase, partial [Heliconius cydno cydnides]
gi|405116431|gb|AFR91647.1| helicase, partial [Heliconius cydno cydnides]
gi|405116433|gb|AFR91648.1| helicase, partial [Heliconius cydno cydnides]
gi|405116435|gb|AFR91649.1| helicase, partial [Heliconius cydno cydnides]
gi|405116437|gb|AFR91650.1| helicase, partial [Heliconius cydno cydnides]
gi|405116439|gb|AFR91651.1| helicase, partial [Heliconius cydno cydnides]
gi|405116441|gb|AFR91652.1| helicase, partial [Heliconius cydno cydnides]
gi|405116443|gb|AFR91653.1| helicase, partial [Heliconius cydno cydnides]
gi|405116445|gb|AFR91654.1| helicase, partial [Heliconius cydno cydnides]
gi|405116447|gb|AFR91655.1| helicase, partial [Heliconius cydno cydnides]
gi|405116449|gb|AFR91656.1| helicase, partial [Heliconius cydno cydnides]
gi|405116451|gb|AFR91657.1| helicase, partial [Heliconius cydno cydnides]
gi|405116453|gb|AFR91658.1| helicase, partial [Heliconius cydno cydnides]
gi|405116455|gb|AFR91659.1| helicase, partial [Heliconius cydno cydnides]
gi|405116457|gb|AFR91660.1| helicase, partial [Heliconius cydno cydnides]
gi|405116459|gb|AFR91661.1| helicase, partial [Heliconius cydno cydnides]
gi|405116461|gb|AFR91662.1| helicase, partial [Heliconius cydno cydnides]
Length = 238
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 10 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 69
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 70 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 129
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 130 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 189
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 190 GDTDCNKMCDVCENSNTTTREISL 213
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 83 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 123
>gi|261887719|gb|ACY05342.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|405116387|gb|AFR91625.1| helicase, partial [Heliconius cydno weymeri]
gi|405116389|gb|AFR91626.1| helicase, partial [Heliconius cydno weymeri]
gi|405116399|gb|AFR91631.1| helicase, partial [Heliconius cydno weymeri]
gi|405116401|gb|AFR91632.1| helicase, partial [Heliconius cydno weymeri]
gi|405116407|gb|AFR91635.1| helicase, partial [Heliconius cydno weymeri]
gi|405116409|gb|AFR91636.1| helicase, partial [Heliconius cydno weymeri]
gi|405116419|gb|AFR91641.1| helicase, partial [Heliconius cydno weymeri]
Length = 238
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 10 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 69
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 70 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 129
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 130 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 189
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 190 GDTDCNKMCDICENSNTTTREISL 213
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 83 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 123
>gi|345095797|gb|AEN67440.1| helicase [Heliconius numata aurora]
Length = 245
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSXVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095753|gb|AEN67418.1| helicase [Heliconius numata aurora]
Length = 244
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 224 GDTDCNKMCDVC 235
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|345095765|gb|AEN67424.1| helicase [Heliconius numata aurora]
gi|345095815|gb|AEN67449.1| helicase [Heliconius numata silvana]
gi|345095841|gb|AEN67462.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095755|gb|AEN67419.1| helicase [Heliconius numata arcuella]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095819|gb|AEN67451.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRFDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095751|gb|AEN67417.1| helicase [Heliconius numata illustris]
gi|345095761|gb|AEN67422.1| helicase [Heliconius numata aurora]
gi|345095763|gb|AEN67423.1| helicase [Heliconius numata aurora]
gi|345095775|gb|AEN67429.1| helicase [Heliconius numata aurora]
gi|345095783|gb|AEN67433.1| helicase [Heliconius numata aurora]
gi|345095789|gb|AEN67436.1| helicase [Heliconius numata aurora]
gi|345095791|gb|AEN67437.1| helicase [Heliconius numata aurora]
gi|345095795|gb|AEN67439.1| helicase [Heliconius numata aurora]
gi|345095799|gb|AEN67441.1| helicase [Heliconius numata aurora]
gi|345095803|gb|AEN67443.1| helicase [Heliconius numata aurora]
gi|345095809|gb|AEN67446.1| helicase [Heliconius numata silvana]
gi|345095813|gb|AEN67448.1| helicase [Heliconius numata silvana]
gi|345095823|gb|AEN67453.1| helicase [Heliconius numata silvana]
gi|345095827|gb|AEN67455.1| helicase [Heliconius numata silvana]
gi|345095831|gb|AEN67457.1| helicase [Heliconius numata silvana]
gi|345095833|gb|AEN67458.1| helicase [Heliconius numata silvana]
gi|345095843|gb|AEN67463.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095801|gb|AEN67442.1| helicase [Heliconius numata aurora]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVXMKWHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKXYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095741|gb|AEN67412.1| helicase [Heliconius numata aurora]
gi|345095837|gb|AEN67460.1| helicase [Heliconius numata silvana]
gi|345095839|gb|AEN67461.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095739|gb|AEN67411.1| helicase [Heliconius numata arcuella]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095825|gb|AEN67454.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCXKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|261887717|gb|ACY05341.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 135/206 (65%), Gaps = 19/206 (9%)
Query: 48 NF-YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
NF Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV Y
Sbjct: 12 NFHYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYY 71
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA +E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGR
Sbjct: 72 HATMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGR 131
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE
Sbjct: 132 AGRDGQRAECVTLYRMQDIFKVSSMVFSSXGSMDHLYDMVKYCLNGTFCRRLLLAKHFDE 191
Query: 209 AWSDTECRGMCDHCRGGRRDAKRVDV 234
W DT+C MCD C + + +
Sbjct: 192 DWGDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|261870786|gb|ACY02251.1| helicase [Heliconius cydno]
Length = 302
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPXVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDVCENSNTXTREISL 247
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPXVRFVIHHTISKSIENYYQ 157
>gi|345095787|gb|AEN67435.1| helicase [Heliconius numata aurora]
gi|345095811|gb|AEN67447.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKFRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095807|gb|AEN67445.1| helicase [Heliconius numata silvana]
Length = 245
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY+++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMIKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|443429393|gb|AGC92678.1| ATP-dependent DNA helicase Q1-like protein [Heliconius erato]
Length = 632
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 277 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 336
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 337 TMEAKARSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 396
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 397 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 456
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 457 GDNDCNKMCDVCTNSNTTTREINL 480
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 350 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 390
>gi|261870800|gb|ACY02258.1| helicase [Heliconius pachinus]
Length = 302
Score = 211 bits (536), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+ +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYXGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDXCENSNTTTREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261870796|gb|ACY02256.1| helicase [Heliconius pachinus]
Length = 302
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+ +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 44 YYKILEKPTSQEDCLSILEKLLKYRYXGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 103
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 104 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 163
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 164 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 223
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 224 GDTDCNKMCDXCENSNTTXREISL 247
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 117 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 157
>gi|261887711|gb|ACY05338.1| RecQ helicase [Heliconius melpomene rosina]
Length = 305
Score = 210 bits (535), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ GLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKXGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSXGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|345095769|gb|AEN67426.1| helicase [Heliconius numata aurora]
gi|345095779|gb|AEN67431.1| helicase [Heliconius numata aurora]
Length = 245
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DC+ L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCISILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY+++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMIKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095745|gb|AEN67414.1| helicase [Heliconius numata illustris]
Length = 245
Score = 210 bits (534), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECXTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095743|gb|AEN67413.1| helicase [Heliconius numata illustris]
Length = 245
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECATLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|357627945|gb|EHJ77457.1| putative RecQ Helicase [Danaus plexippus]
Length = 527
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ E++ E L+ R L+++ YHA
Sbjct: 175 YYKILEKPTSQEDCLTILEKLLKYRYRGESGIIYTNSIKDSEEIAEGLKKRNLKIACYHA 234
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L + + ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 235 NLSAEIRSKVHIRWHEKSLQAIVATVAFGMGIDKPDVRFVIHHTISKSMENYYQESGRAG 294
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG A C+ YR+ DVFK+S+MVF L +LY +V YCL+ T CRR +IA +FDE W
Sbjct: 295 RDGLRAECVTLYRMQDVFKVSTMVFSSVGSLDHLYGMVKYCLNGTLCRRQLIAEHFDEDW 354
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C ++K + +
Sbjct: 355 GDADCNKMCDVCSNPNVNSKEISL 378
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 29/30 (96%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 259 TVAFGMGIDKPDVRFVIHHTISKSMENYYQ 288
>gi|345095749|gb|AEN67416.1| helicase [Heliconius numata illustris]
gi|345095771|gb|AEN67427.1| helicase [Heliconius numata aurora]
gi|345095777|gb|AEN67430.1| helicase [Heliconius numata aurora]
Length = 245
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMXKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095737|gb|AEN67410.1| helicase [Heliconius numata arcuella]
Length = 245
Score = 209 bits (533), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRF IHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKXYQAIVATVAFGMGIDKPDVRFXIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRF IHH +SKS+EN+YQ
Sbjct: 118 WHAKXYQAIVATVAFGMGIDKPDVRFXIHHTISKSIENYYQ 158
>gi|345095835|gb|AEN67459.1| helicase [Heliconius numata silvana]
Length = 245
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCJ L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCJSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMXKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095773|gb|AEN67428.1| helicase [Heliconius numata aurora]
Length = 245
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCJ L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCJSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMXKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|345095785|gb|AEN67434.1| helicase [Heliconius numata aurora]
Length = 245
Score = 209 bits (532), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCJ L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCJSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMXKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|295151550|gb|ADF81943.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQXAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|345095757|gb|AEN67420.1| helicase [Heliconius numata arcuella]
gi|345095767|gb|AEN67425.1| helicase [Heliconius numata aurora]
Length = 245
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD Q A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDXQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|261887723|gb|ACY05344.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQ 127
>gi|261887731|gb|ACY05348.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQ 127
>gi|261887727|gb|ACY05346.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKSIENYYQ 127
>gi|295151516|gb|ADF81926.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHXKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHXKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151636|gb|ADF81985.1| RecQ helicase [Heliconius erato emma]
Length = 233
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 11 YYKILEKPTSQEDCLSILXKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 70
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 71 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 130
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 131 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 190
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 191 GDSDCNKMCDVCANSNTTTREINL 214
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 84 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 124
>gi|345095747|gb|AEN67415.1| helicase [Heliconius numata illustris]
Length = 245
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/192 (50%), Positives = 130/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD Q A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 165 RDRQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|295151617|gb|ADF81976.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKARSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDXDCNKMCDVCANSNXTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151542|gb|ADF81939.1| RecQ helicase [Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151560|gb|ADF81948.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151613|gb|ADF81974.1| RecQ helicase [Heliconius erato emma]
gi|295151634|gb|ADF81984.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151518|gb|ADF81927.1| RecQ helicase [Heliconius erato favorinus]
gi|295151520|gb|ADF81928.1| RecQ helicase [Heliconius erato favorinus]
gi|295151524|gb|ADF81930.1| RecQ helicase [Heliconius erato favorinus]
gi|295151526|gb|ADF81931.1| RecQ helicase [Heliconius erato favorinus]
gi|295151528|gb|ADF81932.1| RecQ helicase [Heliconius erato favorinus]
gi|295151530|gb|ADF81933.1| RecQ helicase [Heliconius erato favorinus]
gi|295151534|gb|ADF81935.1| RecQ helicase [Heliconius erato favorinus]
gi|295151540|gb|ADF81938.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151546|gb|ADF81941.1| RecQ helicase [Heliconius erato emma]
gi|295151548|gb|ADF81942.1| RecQ helicase [Heliconius erato emma]
gi|295151554|gb|ADF81945.1| RecQ helicase [Heliconius erato favorinus]
gi|295151556|gb|ADF81946.1| RecQ helicase [Heliconius erato favorinus]
gi|295151574|gb|ADF81955.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151576|gb|ADF81956.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151580|gb|ADF81958.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151585|gb|ADF81960.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151591|gb|ADF81963.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151597|gb|ADF81966.1| RecQ helicase [Heliconius erato emma]
gi|295151599|gb|ADF81967.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151603|gb|ADF81969.1| RecQ helicase [Heliconius erato emma]
gi|295151615|gb|ADF81975.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151621|gb|ADF81978.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151623|gb|ADF81979.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
gi|295151626|gb|ADF81980.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151544|gb|ADF81940.1| RecQ helicase [Heliconius erato emma]
gi|295151572|gb|ADF81954.1| RecQ helicase [Heliconius erato emma]
gi|295151605|gb|ADF81970.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHSKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHSKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151619|gb|ADF81977.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151582|gb|ADF81959.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151595|gb|ADF81965.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNXTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151538|gb|ADF81937.1| RecQ helicase [Heliconius erato favorinus]
gi|295151570|gb|ADF81953.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHXKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHXKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151522|gb|ADF81929.1| RecQ helicase [Heliconius erato favorinus]
gi|295151552|gb|ADF81944.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTXYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151587|gb|ADF81961.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 236
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151536|gb|ADF81936.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSXTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151578|gb|ADF81957.1| RecQ helicase [Heliconius erato emma]
Length = 237
Score = 207 bits (527), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDNDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|345095817|gb|AEN67450.1| helicase [Heliconius numata silvana]
Length = 245
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 129/192 (67%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCJ L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 45 YYKILEKPTSQEDCJSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 104
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 105 TMEAKSRSDVHMKWHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 164
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSM F + +LY++ YCL+ T CRR ++A +FDE W
Sbjct: 165 RDGQRAECVTLYRMQDIFKVSSMXFSSVGSMDHLYDMXKYCLNGTFCRRLLLAKHFDEDW 224
Query: 211 SDTECRGMCDHC 222
DT+C MCD C
Sbjct: 225 GDTDCNKMCDVC 236
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 118 WHAKGYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 158
>gi|295151562|gb|ADF81949.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y + KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYXILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151632|gb|ADF81983.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 236
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGVSGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHSKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 194 GDSDCNKMCDVCANSNTTTREINL 217
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHSKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|295151593|gb|ADF81964.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 207 bits (526), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 134/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNITTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|261887725|gb|ACY05345.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SK +EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHIKWHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKXIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSXGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SK +EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKXIENYYQ 127
>gi|295151628|gb|ADF81981.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGXSGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKARSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDXDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|261887721|gb|ACY05343.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 206 bits (525), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SK +EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKXIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SK +EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKSDVRFVIHHTISKXIENYYQ 127
>gi|295151564|gb|ADF81950.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 206 bits (524), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDYDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151532|gb|ADF81934.1| RecQ helicase [Heliconius erato favorinus]
Length = 237
Score = 206 bits (524), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGXFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDXDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151566|gb|ADF81951.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 206 bits (523), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGXSGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY+++ YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMIKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D +C MCD C + +++
Sbjct: 195 GDXDCNKMCDVCANSXTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151630|gb|ADF81982.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ + RGLRV YHA
Sbjct: 15 YYKILEKPTSQEDCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGXKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151589|gb|ADF81962.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+ CL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEXCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151607|gb|ADF81971.1| RecQ helicase [Heliconius erato emma]
gi|295151609|gb|ADF81972.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+ CL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEXCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|295151568|gb|ADF81952.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 237
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 133/204 (65%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+ CL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 15 YYKILEKPTSQEXCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 74
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 75 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 134
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W
Sbjct: 135 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDW 194
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D++C MCD C + +++
Sbjct: 195 GDSDCNKMCDVCANSNTTTREINL 218
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 88 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 128
>gi|308512775|gb|ADO33041.1| recQ helicase [Biston betularia]
Length = 446
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y KP +Q DCL L L+ R++N+SGIIYT SIK+ E++ + L RGL+V YHA
Sbjct: 216 YYTAIEKPTSQDDCLSILEKLLKHRYKNESGIIYTNSIKDTEEISQGLCKRGLKVGCYHA 275
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S+ ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 276 NMDSDARTKVHLKWHDKHYQAIVATVAFGMGIDKPDVRFVIHHTISKSMENYYQESGRAG 335
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG A C+ YR+ DVFK+S+MVF L +LY +V YCL+ T CRR +IA +FDE W
Sbjct: 336 RDGLRAECVTMYRMQDVFKVSTMVFSSVGSLDHLYGMVKYCLNGTYCRRQLIAEHFDEDW 395
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
+++C MCD C + K + +
Sbjct: 396 GESDCNKMCDICCQTTNNQKEITI 419
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 289 WHDKHYQAIVATVAFGMGIDKPDVRFVIHHTISKSMENYYQ 329
>gi|198429056|ref|XP_002130932.1| PREDICTED: similar to MGC131022 protein [Ciona intestinalis]
Length = 652
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 123/194 (63%), Gaps = 18/194 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQVR KP D + ++ L++ F+NQ GIIY S K C ++ L RG++ S YHA
Sbjct: 282 FYQVREKPNTNDDVIKDIVQLINSNFKNQPGIIYCFSRKNCAEVASSLNKRGIKSSEYHA 341
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+L + +IAFG+GIDKPNVRFVIHH +SKS+EN+YQESGRAG
Sbjct: 342 QLTPDDKTKVHHMWSDNNIQVICATIAFGMGIDKPNVRFVIHHSMSKSVENYYQESGRAG 401
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG A C+LY+ DVFK S+MV ++TGL NL ++ YCLD CRR +I++YF EAW
Sbjct: 402 RDGSPALCLLYFGFTDVFKQSTMVMTERTGLDNLNQMIKYCLDVKSCRRNLISTYFGEAW 461
Query: 211 SDTECRGMCDHCRG 224
S C MCD C G
Sbjct: 462 SSISCHEMCDTCSG 475
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/42 (64%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+W + QV +IAFG+GIDKPNVRFVIHH +SKS+EN+YQ
Sbjct: 354 MWSDNNIQVICATIAFGMGIDKPNVRFVIHHSMSKSVENYYQ 395
>gi|345313794|ref|XP_001516308.2| PREDICTED: ATP-dependent DNA helicase Q1-like, partial
[Ornithorhynchus anatinus]
Length = 451
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 132/199 (66%), Gaps = 18/199 (9%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
VR KP + +D ++++A L++ R+ QSGIIY S K+ E + LR RG+ +AYHA +E
Sbjct: 87 VRRKPPSPEDFIEDVAKLINGRYAGQSGIIYCFSQKDSEQVTTSLRQRGIEAAAYHANME 146
Query: 112 SN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD
Sbjct: 147 AQDKTRVHKKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDD 206
Query: 154 QIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Q A CILY D+F++SSMV + G LY++VSYCLD+ +CRRA+IA +FDE W+ T
Sbjct: 207 QRADCILYSGFGDIFRISSMVVMESVGQQKLYDMVSYCLDEIKCRRALIARHFDEVWAST 266
Query: 214 ECRGMCDHCRGGRRDAKRV 232
C GMCD+CR R+ V
Sbjct: 267 ACNGMCDNCRRETRECPAV 285
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 157 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 197
>gi|261887729|gb|ACY05347.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ K +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKXTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKXRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKSIENYYQ 127
>gi|261887707|gb|ACY05336.1| RecQ helicase [Heliconius melpomene melpomene]
Length = 305
Score = 203 bits (517), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 132/204 (64%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ K +Q+DCL L L+ R+R +SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKXTSQEDCLSILEKLLKYRYRGESGIIYTNSIKDSEDIANGLKXRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ T CRR ++A +FDE W
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGTFCRRLLLAKHFDEDW 193
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
DT+C MCD C + + +
Sbjct: 194 GDTDCNKMCDVCENSNTTTREISL 217
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKXDVRFVIHHTISKSIENYYQ 127
>gi|324502777|gb|ADY41219.1| ATP-dependent DNA helicase Q1 [Ascaris suum]
Length = 502
Score = 202 bits (515), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 102/232 (43%), Positives = 149/232 (64%), Gaps = 33/232 (14%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
++ F G ++PN+ +Y+VR KP++ + LDEL L++ RF QSGII
Sbjct: 162 AVVFRAGFNRPNL--------------YYEVRNKPSSSEQFLDELVSLINDRFDGQSGII 207
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S KECEDL LR+R ++ + YHA LES+ ++AFG+GID
Sbjct: 208 YCFSRKECEDLTHALRSRKIKAAHYHAYLESDKRSRTHERWIGGEVDVIVATVAFGMGID 267
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
K +VR+VIHH ++KSMEN+YQESGRAGRDG+ A CILYYRL D+F+ S+MV ++TG++N
Sbjct: 268 KTDVRYVIHHSMAKSMENYYQESGRAGRDGKQATCILYYRLGDLFRQSTMVCTEKTGVSN 327
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR-GGRRDAKRVDV 234
LY++++YC+ + CRR++IA +F+E + + C MCD C G + VD+
Sbjct: 328 LYSMLAYCIQRKECRRSLIAEHFNETFERSLCAQMCDICSIEGSQSTSTVDI 379
>gi|71987993|ref|NP_001022656.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
gi|75024696|sp|Q9TXJ8.3|RECQ1_CAEEL RecName: Full=Putative ATP-dependent DNA helicase Q1
gi|351065878|emb|CCD61879.1| Protein K02F3.12, isoform a [Caenorhabditis elegans]
Length = 631
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 135/224 (60%), Gaps = 32/224 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q ++ F G ++ N++ Y+V KP ++ +C +E+A + R F Q+G
Sbjct: 290 QAALTFRAGFNRSNLK--------------YKVVQKPGSEDECTEEIAKTIKRDFAGQTG 335
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S +CE + + L++ G++ YHA +E ++AFG+G
Sbjct: 336 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 395
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKPNVRFVIHH L KS+EN+YQESGRAGRDGQ A CILYYRL D+FK SSMV ++TG+
Sbjct: 396 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQSSMVQQERTGI 455
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
NLYN+V Y D + CRR +A +F+EAW + C+ CD C G
Sbjct: 456 QNLYNMVRYAADSSTCRRVKLAEHFEEAWEPSWCQKQCDTCENG 499
>gi|71987997|ref|NP_001022657.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
gi|351065879|emb|CCD61880.1| Protein K02F3.12, isoform b [Caenorhabditis elegans]
Length = 608
Score = 201 bits (510), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/224 (43%), Positives = 135/224 (60%), Gaps = 32/224 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q ++ F G ++ N++ Y+V KP ++ +C +E+A + R F Q+G
Sbjct: 267 QAALTFRAGFNRSNLK--------------YKVVQKPGSEDECTEEIAKTIKRDFAGQTG 312
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S +CE + + L++ G++ YHA +E ++AFG+G
Sbjct: 313 IIYCLSRNDCEKVAKALKSHGIKAKHYHAYMEPVDRSGAHQGWISGKIQVIVATVAFGMG 372
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKPNVRFVIHH L KS+EN+YQESGRAGRDGQ A CILYYRL D+FK SSMV ++TG+
Sbjct: 373 IDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQSSMVQQERTGI 432
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
NLYN+V Y D + CRR +A +F+EAW + C+ CD C G
Sbjct: 433 QNLYNMVRYAADSSTCRRVKLAEHFEEAWEPSWCQKQCDTCENG 476
>gi|308477330|ref|XP_003100879.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
gi|308264453|gb|EFP08406.1| hypothetical protein CRE_16178 [Caenorhabditis remanei]
Length = 607
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/234 (42%), Positives = 144/234 (61%), Gaps = 33/234 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q ++ F G ++ N++ YQV K ++ +C++E+A ++ +RF ++G
Sbjct: 248 QAALVFRAGFNRSNLK--------------YQVLPKKGSEDECVEEIAAIIKQRFSGETG 293
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S +CE + + L+ +G+R YHA +E N ++AFG+G
Sbjct: 294 IIYCLSRNDCEKVAKSLKTQGIRAKHYHAYMEPNDRSACHQSWISGKIQVIVATVAFGMG 353
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH L KS+EN+YQESGRAGRDG+ A CILYYRL D+FK SSMV ++TG+
Sbjct: 354 IDKPDVRFVIHHSLPKSIENYYQESGRAGRDGRPATCILYYRLADIFKQSSMVQQERTGI 413
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC-RGGRRDAKRVDV 234
ANLYNIV+Y + CRR +A +F+EAW + C+ CD C + + K +DV
Sbjct: 414 ANLYNIVNYAYESRICRRVKLAEHFEEAWEPSWCQKQCDVCEKATDGETKSIDV 467
>gi|170064539|ref|XP_001867566.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
gi|167881896|gb|EDS45279.1| ATP-dependent DNA helicase Q1 [Culex quinquefasciatus]
Length = 701
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 128/192 (66%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y V KP+ +++ D LA+LM R+RN SGIIYT ++KE E++ +L R ++V YHA
Sbjct: 284 YYHVLEKPSDKEELYDMLAELMKGRYRNMSGIIYTFTVKETEEISTQLLQRDVKVIPYHA 343
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ ++AFG+GIDK +VRFVIHH +SKSMENFYQESGRAG
Sbjct: 344 YLDAKQRSRTHQRWMSNEVQAVVATVAFGMGIDKADVRFVIHHTISKSMENFYQESGRAG 403
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ A CIL YR D+F+LS+M F + GL+NLY++V YC++ CRR +I+ +F E W
Sbjct: 404 RDGRRADCILLYRFMDLFRLSTMSFQEYEGLSNLYSMVKYCINGKDCRRRLISRHFAEVW 463
Query: 211 SDTECRGMCDHC 222
DT C MCD C
Sbjct: 464 DDTHCNRMCDRC 475
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK +VRFVIHH +SKSMENFYQ
Sbjct: 368 TVAFGMGIDKADVRFVIHHTISKSMENFYQ 397
>gi|443695320|gb|ELT96261.1| hypothetical protein CAPTEDRAFT_131881 [Capitella teleta]
Length = 570
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 130/193 (67%), Gaps = 18/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP+ ++E+ DL+ RFR+QSGI+Y + K+ E++ +L++ GL + YHA
Sbjct: 291 FYEVRPKPSNAHALVEEIVDLIQTRFRDQSGIVYCLTQKDSEEMARQLQSHGLTAACYHA 350
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++++ +IAFG+GIDKPNVRFVIHH +SKSMEN+YQESGRAG
Sbjct: 351 QMDAKHRSLAHRKWTTNKIQVVVATIAFGMGIDKPNVRFVIHHTISKSMENYYQESGRAG 410
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD Q AHCI++ D+F+ S+MVF +QTG LY+++ Y D + CRRA+IA +F E W
Sbjct: 411 RDDQTAHCIVFRGFADLFRQSTMVFSEQTGQEKLYSMLDYVNDLSTCRRALIARHFGETW 470
Query: 211 SDTECRGMCDHCR 223
++C+ CD+C+
Sbjct: 471 KSSDCQEKCDNCQ 483
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ QV +IAFG+GIDKPNVRFVIHH +SKSMEN+YQ
Sbjct: 364 WTTNKIQVVVATIAFGMGIDKPNVRFVIHHTISKSMENYYQ 404
>gi|291228382|ref|XP_002734149.1| PREDICTED: RecQ protein-like (DNA helicase Q1-like)-like
[Saccoglossus kowalevskii]
Length = 785
Score = 196 bits (499), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 93/198 (46%), Positives = 133/198 (67%), Gaps = 19/198 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP ++C+ E++ L++ +F+ Q GIIY S K+CE + +LR G+ YH+
Sbjct: 285 YYEVRRKPKKHEECVAEISKLLNGKFKGQIGIIYCFSRKDCETIAADLRKGGIEALPYHS 344
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S+ +IAFG+GIDKPNVRFVIHH +SKS+EN+YQESGRAG
Sbjct: 345 DIDSSRRSQIHRAWAKETIQVVVATIAFGMGIDKPNVRFVIHHTMSKSVENYYQESGRAG 404
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF-DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
RDG A+CIL+ D+F+ S+MV + QT L NLYN+V YC + RCRR++IA +F E+
Sbjct: 405 RDGLPAYCILFLGFGDIFRQSTMVLTETQTALDNLYNMVRYCTNIERCRRSLIARHFGES 464
Query: 210 WSDTECRGMCDHCRGGRR 227
W ++C GMCD+CR R+
Sbjct: 465 WDFSQCSGMCDNCRLKRK 482
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GIDKPNVRFVIHH +SKS+EN+YQ
Sbjct: 358 WAKETIQVVVATIAFGMGIDKPNVRFVIHHTMSKSVENYYQ 398
>gi|268570477|ref|XP_002640754.1| Hypothetical protein CBG24191 [Caenorhabditis briggsae]
gi|296439745|sp|A8WK63.1|RECQ1_CAEBR RecName: Full=Putative ATP-dependent DNA helicase Q1
Length = 618
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/220 (42%), Positives = 132/220 (60%), Gaps = 32/220 (14%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGI 80
V+I F G ++ N+ Y+V KP ++ +C++++ + R+F ++GI
Sbjct: 268 VAIVFRAGFNRANLN--------------YKVLTKPGSEDECVEKIVRTIKRKFSGKTGI 313
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
IY S +CE L + L+ G+R YHA +E ++AFG+GI
Sbjct: 314 IYCLSRNDCEKLAKSLKANGIRAKHYHAYMEPVDRSAAHQKWVSGEIQVIVATVAFGMGI 373
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA 182
DKP+VRFVIHH L KS+EN+YQESGRAGRDG A CILYYR+ D+FK SSM+ +QTG+A
Sbjct: 374 DKPDVRFVIHHSLPKSIENYYQESGRAGRDGLPATCILYYRMSDIFKQSSMIQQEQTGIA 433
Query: 183 NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
NLYN+V Y D CRR +A +F+EAW + C+ CD C
Sbjct: 434 NLYNMVRYASDTVTCRRVKLAEHFEEAWEPSWCQKQCDVC 473
>gi|444719769|gb|ELW60560.1| ATP-dependent DNA helicase Q1, partial [Tupaia chinensis]
Length = 648
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 285 YYEVRQKPSNTEDFIEDVVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 344
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRF+IHH +SKSMEN+YQESGRAG
Sbjct: 345 NMEPDDKTKVHRRWSANEIQVIVATVAFGMGIDKPDVRFIIHHSMSKSMENYYQESGRAG 404
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYCL+ ++CRR +IA +FDE W
Sbjct: 405 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCLNISKCRRVLIAQHFDEVW 464
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 465 NSEACNKMCDNC 476
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRF+IHH +SKSMEN+YQ
Sbjct: 358 WSANEIQVIVATVAFGMGIDKPDVRFIIHHSMSKSMENYYQ 398
>gi|308481757|ref|XP_003103083.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
gi|308260459|gb|EFP04412.1| hypothetical protein CRE_25739 [Caenorhabditis remanei]
Length = 630
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 98/234 (41%), Positives = 141/234 (60%), Gaps = 33/234 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q ++ F G ++ N++ YQV K + +C++E+A ++ +RF ++G
Sbjct: 267 QAALVFRAGFNRSNLK--------------YQVLPKKGNEDECVEEIAAIIKKRFSGETG 312
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S +CE + + L+ + +R YHA +E N ++AFG+G
Sbjct: 313 IIYCLSRNDCEKVAKSLKAQVIRAKHYHAYMEPNDRSACHQSWISGKIQVIVATVAFGMG 372
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH L KS+EN+YQESGRAGRDG+ A CILYYRL D+FK SSMV ++TG+
Sbjct: 373 IDKPDVRFVIHHSLPKSIENYYQESGRAGRDGRPATCILYYRLADIFKQSSMVQQERTGI 432
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC-RGGRRDAKRVDV 234
ANLYNIV Y + CRR +A +F+EAW + C+ CD C + + K +DV
Sbjct: 433 ANLYNIVRYAYESRICRRVKLAEHFEEAWEPSWCQKQCDVCEKATDWETKSIDV 486
>gi|291392532|ref|XP_002712674.1| PREDICTED: RecQ protein-like [Oryctolagus cuniculus]
Length = 887
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 125/193 (64%), Gaps = 18/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 525 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 584
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 585 NMEPEDKTKVHTRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 644
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 645 RDDTKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 704
Query: 211 SDTECRGMCDHCR 223
+ C MCD+CR
Sbjct: 705 NSEACNKMCDNCR 717
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 598 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 638
>gi|295151558|gb|ADF81947.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 211
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 123/192 (64%), Gaps = 18/192 (9%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA +E+
Sbjct: 1 DCLSILEKLLKYRYRGASGIIYTNSIKDSEDIANGLKKRGLRVGYYHATMEAKARSDVHM 60
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
++AFG+GIDKP+VRFV HH +SKS+EN+YQESGRAGRDGQ A C+ Y
Sbjct: 61 KWHAKEYQAIVATVAFGMGIDKPDVRFVXHHTISKSIENYYQESGRAGRDGQRAECVTLY 120
Query: 163 RLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
R+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W B +C MCD C
Sbjct: 121 RMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDWGBNDCNKMCDVC 180
Query: 223 RGGRRDAKRVDV 234
+ +++
Sbjct: 181 ANSNTXTREINL 192
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFV HH +SKS+EN+YQ
Sbjct: 62 WHAKEYQAIVATVAFGMGIDKPDVRFVXHHTISKSIENYYQ 102
>gi|387015566|gb|AFJ49902.1| ATP-dependent DNA helicase Q1 [Crotalus adamanteus]
Length = 652
Score = 192 bits (489), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 123/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP++ ++C++++ L++ R++ SGIIY S K+ E + L+ G++ YHA
Sbjct: 287 YYEVRQKPSSAQNCIEDIVKLINGRYKGLSGIIYCFSQKDAEQVTMSLQKLGIKAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPKDKSRVHKRWCANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD Q A CILYY D+F++S+MV + G LY +VSYC D RCRR IA +FDEAW
Sbjct: 407 RDDQRADCILYYGFGDIFRISTMVVMENVGQQKLYGMVSYCHDMGRCRRVQIAHHFDEAW 466
Query: 211 SDTECRGMCDHC 222
C MCD+C
Sbjct: 467 DSASCNKMCDNC 478
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 29/30 (96%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|402885395|ref|XP_003906142.1| PREDICTED: ATP-dependent DNA helicase Q1 [Papio anubis]
Length = 649
Score = 192 bits (489), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 FYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTAVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|358679347|ref|NP_001240636.1| ATP-dependent DNA helicase Q1 [Sus scrofa]
Length = 649
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTTVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDTKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
S EC MCD+C
Sbjct: 467 SPEECNKMCDNC 478
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|62858709|ref|NP_001016316.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|89266858|emb|CAJ83846.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
gi|213624210|gb|AAI70790.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus (Silurana)
tropicalis]
Length = 558
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 124/201 (61%), Gaps = 20/201 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR+KP++ +D + ++ L++ R+R QSGIIY S K+ E + L+ G+R YHA
Sbjct: 289 FYEVRLKPSSSQDFIADIVKLINSRYRGQSGIIYCFSQKDSEHVTMSLQKLGIRAGTYHA 348
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 349 NMEPRDKTKVHTKWTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 408
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +V YC RCRR +IA +FDE W
Sbjct: 409 RDDARADCILYYGFGDIFRISSMVVMENVGQKKLYEMVGYCQSPDRCRRVLIAQHFDEVW 468
Query: 211 SDTECRGMCDHC--RGGRRDA 229
+C MCD+C GG A
Sbjct: 469 DSAKCNKMCDNCNSEGGWEKA 489
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + Q+ ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 362 WTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 402
>gi|197100975|ref|NP_001124706.1| ATP-dependent DNA helicase Q1 [Pongo abelii]
gi|75070978|sp|Q5RF63.1|RECQ1_PONAB RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|55725460|emb|CAH89594.1| hypothetical protein [Pongo abelii]
Length = 649
Score = 192 bits (488), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + LRN G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLRNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRLLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|312066223|ref|XP_003136168.1| ATP-dependent DNA helicase [Loa loa]
Length = 590
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 139/219 (63%), Gaps = 32/219 (14%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
++ F G ++PN+ Y V KP++ + +D L +L+ RF SGII
Sbjct: 267 AVVFRAGFNRPNLH--------------YSVCQKPSSDVEFVDILVELIKTRFAELSGII 312
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S KECE+L + LR +G++ S YHA L+++ +IAFG+GID
Sbjct: 313 YCFSRKECEELTKSLRAKGVKASHYHAFLDADKRNITHEKWLNGGINVIVATIAFGMGID 372
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VR+VIHH L KS+EN+YQESGR GRDG A+CIL+YRL D+F+ S+MV ++TG+ N
Sbjct: 373 KPDVRYVIHHSLPKSLENYYQESGRVGRDGNKAYCILFYRLNDLFRQSTMVCTEKTGVRN 432
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY+++SYC+ ++CRR++IA +F+ W+ + C MCD C
Sbjct: 433 LYSVLSYCIQTSQCRRSVIAEHFNVEWNSSLCSKMCDIC 471
>gi|393911114|gb|EJD76172.1| ATP-dependent DNA helicase [Loa loa]
Length = 564
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 94/219 (42%), Positives = 139/219 (63%), Gaps = 32/219 (14%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
++ F G ++PN+ Y V KP++ + +D L +L+ RF SGII
Sbjct: 267 AVVFRAGFNRPNLH--------------YSVCQKPSSDVEFVDILVELIKTRFAELSGII 312
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S KECE+L + LR +G++ S YHA L+++ +IAFG+GID
Sbjct: 313 YCFSRKECEELTKSLRAKGVKASHYHAFLDADKRNITHEKWLNGGINVIVATIAFGMGID 372
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VR+VIHH L KS+EN+YQESGR GRDG A+CIL+YRL D+F+ S+MV ++TG+ N
Sbjct: 373 KPDVRYVIHHSLPKSLENYYQESGRVGRDGNKAYCILFYRLNDLFRQSTMVCTEKTGVRN 432
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY+++SYC+ ++CRR++IA +F+ W+ + C MCD C
Sbjct: 433 LYSVLSYCIQTSQCRRSVIAEHFNVEWNSSLCSKMCDIC 471
>gi|390343347|ref|XP_786769.3| PREDICTED: ATP-dependent DNA helicase Q1 [Strongylocentrotus
purpuratus]
Length = 980
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/220 (44%), Positives = 134/220 (60%), Gaps = 33/220 (15%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F G ++PN+ FY+VR KP+ Q + ++EL L++ F+ QSGIIY
Sbjct: 286 FRAGFNRPNL--------------FYEVRPKPSKQAEFVEELIKLINGEFKGQSGIIYCF 331
Query: 85 SIKECEDLREELRNRGLRVSAYHAKL-------------ESNV-----SIAFGLGIDKPN 126
S K+ E + E L+ G++ YHA L E+N+ ++AFG+GIDKP+
Sbjct: 332 SRKDTETMAENLKKGGIQAHPYHAMLDAQYRSQVHRNWKENNIQVVVATVAFGMGIDKPD 391
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYN 186
VRFVIHH +SKSMEN+YQESGRAGRD + A CI+YY + DVF+ S+MV +QTG LYN
Sbjct: 392 VRFVIHHSISKSMENYYQESGRAGRDDEPARCIVYYGIGDVFRQSTMVVTEQTGQQKLYN 451
Query: 187 IVSYCLDQTRCRRAIIASYFDEAW-SDTECRGMCDHCRGG 225
+V+YC+ CRR++I +F E W C MCD C+ G
Sbjct: 452 MVAYCVAPATCRRSLIGQHFGERWEGQARCNRMCDVCQSG 491
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 369 WKENNIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQ 409
>gi|148226526|ref|NP_001089858.1| RecQ protein-like (DNA helicase Q1-like) [Xenopus laevis]
gi|80476410|gb|AAI08556.1| MGC131022 protein [Xenopus laevis]
Length = 652
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/221 (42%), Positives = 130/221 (58%), Gaps = 32/221 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q + F ++PN+ FY+VR+KP++ +D + ++ L++ R++ QSG
Sbjct: 274 QKPLTFTASFNRPNL--------------FYEVRLKPSSSEDFIADITKLINSRYKGQSG 319
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S K+ E + L+ G+R AYHA +E ++AFG+G
Sbjct: 320 IIYCFSQKDSEQVTMSLQKLGIRAGAYHANMEPRDKSKVHTKWTANEIQIVVATVAFGMG 379
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD A CILYY D+F++SSMV + G
Sbjct: 380 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRISSMVVMENVGQ 439
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY +V Y + RCRR +IA +FDE W +C MCD+C
Sbjct: 440 QKLYEMVKYSQNLNRCRRVLIAQHFDEVWDSAKCNKMCDNC 480
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + Q+ ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 362 WTANEIQIVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 402
>gi|297261947|ref|XP_002798535.1| PREDICTED: ATP-dependent DNA helicase Q1 isoform 2 [Macaca mulatta]
gi|297261949|ref|XP_001094207.2| PREDICTED: ATP-dependent DNA helicase Q1 isoform 1 [Macaca mulatta]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|332839802|ref|XP_520788.3| PREDICTED: ATP-dependent DNA helicase Q1 [Pan troglodytes]
gi|410267548|gb|JAA21740.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267556|gb|JAA21744.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410267560|gb|JAA21746.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304460|gb|JAA30830.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410304462|gb|JAA30831.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352515|gb|JAA42861.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352521|gb|JAA42864.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352523|gb|JAA42865.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352525|gb|JAA42866.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
gi|410352527|gb|JAA42867.1| RecQ protein-like (DNA helicase Q1-like) [Pan troglodytes]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|383420495|gb|AFH33461.1| ATP-dependent DNA helicase Q1 [Macaca mulatta]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTAVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|426371952|ref|XP_004052901.1| PREDICTED: ATP-dependent DNA helicase Q1 [Gorilla gorilla gorilla]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|30584589|gb|AAP36547.1| Homo sapiens RecQ protein-like (DNA helicase Q1-like) [synthetic
construct]
gi|61369219|gb|AAX43302.1| RecQ protein-like [synthetic construct]
Length = 650
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|14591902|ref|NP_116559.1| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|14591904|ref|NP_002898.2| ATP-dependent DNA helicase Q1 [Homo sapiens]
gi|218512113|sp|P46063.3|RECQ1_HUMAN RecName: Full=ATP-dependent DNA helicase Q1; AltName: Full=DNA
helicase, RecQ-like type 1; Short=RecQ1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|119616840|gb|EAW96434.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616841|gb|EAW96435.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616842|gb|EAW96436.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616843|gb|EAW96437.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|119616844|gb|EAW96438.1| RecQ protein-like (DNA helicase Q1-like), isoform CRA_a [Homo
sapiens]
gi|158256686|dbj|BAF84316.1| unnamed protein product [Homo sapiens]
gi|261858616|dbj|BAI45830.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|531243|dbj|BAA07200.1| DNA helicase Q1 [Homo sapiens]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|12654453|gb|AAH01052.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|30583077|gb|AAP35783.1| RecQ protein-like (DNA helicase Q1-like) [Homo sapiens]
gi|61359045|gb|AAX41660.1| RecQ protein-like [synthetic construct]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|380798559|gb|AFE71155.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
Length = 645
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 283 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 342
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 343 NLEPEDKTAVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 402
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 403 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 462
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 463 NSEACNKMCDNC 474
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 356 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 396
>gi|397517493|ref|XP_003828945.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q1 [Pan
paniscus]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|332232887|ref|XP_003265634.1| PREDICTED: ATP-dependent DNA helicase Q1 [Nomascus leucogenys]
Length = 649
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|355564072|gb|EHH20572.1| ATP-dependent DNA helicase Q1, partial [Macaca mulatta]
gi|355785959|gb|EHH66142.1| ATP-dependent DNA helicase Q1, partial [Macaca fascicularis]
Length = 647
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 285 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 344
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 345 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 404
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 405 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 464
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 465 NSEACNKMCDNC 476
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 358 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 398
>gi|151568124|pdb|2V1X|A Chain A, Crystal Structure Of Human Recq-Like Dna Helicase
gi|151568125|pdb|2V1X|B Chain B, Crystal Structure Of Human Recq-Like Dna Helicase
gi|282403581|pdb|2WWY|A Chain A, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
gi|282403582|pdb|2WWY|B Chain B, Structure Of Human Recq-Like Helicase In Complex With A
Dna Substrate
Length = 591
Score = 191 bits (484), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 240 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 299
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 300 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 359
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 360 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 419
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 420 NSEACNKMCDNC 431
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 313 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 353
>gi|341891862|gb|EGT47797.1| hypothetical protein CAEBREN_03628 [Caenorhabditis brenneri]
Length = 617
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 96/234 (41%), Positives = 140/234 (59%), Gaps = 33/234 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q ++ F G ++ N++ Y+V K ++ ++C +E+A +++ +F Q+G
Sbjct: 267 QAALVFRAGFNRSNLK--------------YEVISKKSSDEECAEEIAHVINTQFSGQTG 312
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y S +CE + L+ +G+R YHA +E + ++AFG+G
Sbjct: 313 IVYCLSRNDCEKMATLLKTKGIRAKHYHAYMEPSEKSSSHQNWISGKIQVIVATVAFGMG 372
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH + KS+EN+YQESGRAGRDG A CILY++L DVFK SSMV +TGL
Sbjct: 373 IDKPDVRFVIHHTIPKSIENYYQESGRAGRDGLPATCILYFKLSDVFKQSSMVQQDRTGL 432
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC-RGGRRDAKRVDV 234
+NLYNIV Y D + CRR +A +F+EAW + C+ CD C R + K DV
Sbjct: 433 SNLYNIVRYASDSSTCRRVKMAEHFEEAWEPSWCQKQCDVCQRATSSELKSTDV 486
>gi|157115597|ref|XP_001652627.1| DNA helicase recq1 [Aedes aegypti]
gi|108876847|gb|EAT41072.1| AAEL007256-PA [Aedes aegypti]
Length = 750
Score = 190 bits (483), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 126/193 (65%), Gaps = 19/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y V KP +++ D LADL+ RR+ SGIIYT ++KE ++ EL R ++V YH
Sbjct: 294 YYHVLEKPNDKEELYDLLADLLKRRYHGMSGIIYTFTVKETAEISTELLQREVKVLPYHG 353
Query: 109 K--------------LESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
+ +++ + + AFG+GIDKP+VRFVIHH +SK+MENFYQESGRA
Sbjct: 354 QNMDPKQRSRTHQKWIDNEIQAVVATTAFGMGIDKPDVRFVIHHTMSKTMENFYQESGRA 413
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG+ A CIL YRL D+F++S+M F + GL NLY++V YC++ CRR +I+ +F E
Sbjct: 414 GRDGKRADCILLYRLADMFRISTMSFSEYGGLDNLYSMVKYCINGKDCRRVLISRHFAEV 473
Query: 210 WSDTECRGMCDHC 222
W DT C +CD C
Sbjct: 474 WDDTHCDKLCDRC 486
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDKP+VRFVIHH +SK+MENFYQ
Sbjct: 379 TTAFGMGIDKPDVRFVIHHTMSKTMENFYQ 408
>gi|432088961|gb|ELK23146.1| ATP-dependent DNA helicase Q1 [Myotis davidii]
Length = 489
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ +++ R++ QSGIIY S K+ E + L+ G+R AYHA
Sbjct: 127 YYEVRQKPSNTEDFIEDIVKVINGRYKGQSGIIYCFSQKDSEQVTGSLQKLGIRAGAYHA 186
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 187 NMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 246
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 247 RDDTKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 306
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 307 NSEACNKMCDNC 318
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 200 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 240
>gi|149049048|gb|EDM01502.1| rCG29929, isoform CRA_b [Rattus norvegicus]
Length = 645
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP++ +D ++ +A+L++ R++ +SGIIY S K+ E + L+ G+R YHA
Sbjct: 287 YYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRRA+IA +FDE W
Sbjct: 407 RDDWRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|403269130|ref|XP_003926609.1| PREDICTED: ATP-dependent DNA helicase Q1 [Saimiri boliviensis
boliviensis]
Length = 649
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPPNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|149049047|gb|EDM01501.1| rCG29929, isoform CRA_a [Rattus norvegicus]
Length = 542
Score = 190 bits (482), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP++ +D ++ +A+L++ R++ +SGIIY S K+ E + L+ G+R YHA
Sbjct: 184 YYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHA 243
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 244 NMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 303
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRRA+IA +FDE W
Sbjct: 304 RDDWRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVW 363
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 364 NADACNKMCDNC 375
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 257 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 297
>gi|58865766|ref|NP_001012098.1| ATP-dependent DNA helicase Q1 [Rattus norvegicus]
gi|81910891|sp|Q6AYJ1.1|RECQ1_RAT RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|50925619|gb|AAH79026.1| RecQ protein-like (DNA helicase Q1-like) [Rattus norvegicus]
gi|149049049|gb|EDM01503.1| rCG29929, isoform CRA_c [Rattus norvegicus]
Length = 621
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 126/192 (65%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP++ +D ++ +A+L++ R++ +SGIIY S K+ E + L+ G+R YHA
Sbjct: 287 YYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDRTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRRA+IA +FDE W
Sbjct: 407 RDDWRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|56207957|emb|CAI21096.1| novel protein similar to vertebrate RecQ protein-like DNA helicase
Q1-like (RECQL) [Danio rerio]
Length = 639
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 128/195 (65%), Gaps = 20/195 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +DC D++A L+ R++NQSGI+Y S K+ E + EL+ R + YHA
Sbjct: 293 YYEVRFK--DNEDCTDQIASLIRGRYKNQSGIVYVFSQKDAEVVATELQKRDIVAQPYHA 350
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 351 NMEPSHKSLVHQRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAG 410
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CI+++ D+F++S+MV + TG L+N+V+YC + +RCRRA++A +FDE W
Sbjct: 411 RDDSPADCIVFFGFMDIFRISTMVVMENTGQQKLHNMVAYCQNSSRCRRAMMAIHFDEVW 470
Query: 211 SDTECRGMCDHCRGG 225
+D EC MCD CR G
Sbjct: 471 NDEECNEMCDVCRHG 485
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 364 WSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQ 404
>gi|344266668|ref|XP_003405402.1| PREDICTED: ATP-dependent DNA helicase Q1 [Loxodonta africana]
Length = 648
Score = 189 bits (481), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTRVHRKWSASEIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDVKADCILYYGFGDIFRVSSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSDACNKMCDNC 478
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSASEIQVVVATVAFGMGIDKPDVRFVIHHSISKSMENYYQ 400
>gi|395839223|ref|XP_003792496.1| PREDICTED: ATP-dependent DNA helicase Q1 [Otolemur garnettii]
Length = 648
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L++ G+ AYHA
Sbjct: 288 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTGSLQSLGINAGAYHA 347
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 348 NMEPEDKTRVHRSWAANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 407
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 408 RDDMKADCILYYGFGDIFRVSSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 467
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 468 NSDACNKMCDNC 479
Score = 60.8 bits (146), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 361 WAANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 401
>gi|156359349|ref|XP_001624732.1| predicted protein [Nematostella vectensis]
gi|156211530|gb|EDO32632.1| predicted protein [Nematostella vectensis]
Length = 582
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 124/201 (61%), Gaps = 20/201 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ KP + + L+++RF SGIIY S K+ E + E+ +RG++ + YHA
Sbjct: 286 FYEVQSKPTTNSAFMSTIHQLITKRFSGDSGIIYCFSRKDAEQVAIEMSSRGIKAACYHA 345
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ ++AFG+GIDK NVRFVIHH SKSMEN+YQESGRAG
Sbjct: 346 DMPPESRSQVHMAWTTNKLQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQESGRAG 405
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD + A CI++YR D+F+ S+MVF +QTGL NLY IV YC Q CRR +I +F E W
Sbjct: 406 RDEKRASCIVFYRPFDIFRHSTMVFTEQTGLQNLYGIVRYCQQQGVCRRTLIGRHFGEGW 465
Query: 211 SDTECRGMCDHCRGGRRDAKR 231
+C+ MCD+C RRD +R
Sbjct: 466 DPAQCKQMCDNC--SRRDDER 484
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ QV ++AFG+GIDK NVRFVIHH SKSMEN+YQ
Sbjct: 359 WTTNKLQVVVATVAFGMGIDKSNVRFVIHHSFSKSMENYYQ 399
>gi|340374034|ref|XP_003385544.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Amphimedon
queenslandica]
Length = 775
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/197 (44%), Positives = 126/197 (63%), Gaps = 18/197 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V K ++QK+ +D + L++ RF++QSGI+Y S K+ E + L+ + + YH
Sbjct: 283 FYEVHNKISSQKEQVDTMIQLINSRFKDQSGIVYCFSQKDAEQVSIALQTGSISATCYHG 342
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ ++AFG+GIDK NVRF++HH +SKSMEN+YQESGRAG
Sbjct: 343 GMDAGDRTKAHTEWYDGKIQVIVATVAFGMGIDKSNVRFIMHHSISKSMENYYQESGRAG 402
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A CILYY+L DVF+ S+M T +ANLY +V YC+D +CRRA+IA +F E W
Sbjct: 403 RDGQPATCILYYKLADVFRQSTMSSKDFTSVANLYPMVQYCIDAVQCRRALIAKHFGETW 462
Query: 211 SDTECRGMCDHCRGGRR 227
++C MCD C+ R
Sbjct: 463 KQSDCNEMCDTCKVKSR 479
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVRF++HH +SKSMEN+YQ
Sbjct: 367 TVAFGMGIDKSNVRFIMHHSISKSMENYYQ 396
>gi|118151080|ref|NP_001071459.1| ATP-dependent DNA helicase Q1 [Bos taurus]
gi|117306200|gb|AAI26496.1| RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
gi|296487303|tpg|DAA29416.1| TPA: RecQ protein-like (DNA helicase Q1-like) [Bos taurus]
Length = 649
Score = 189 bits (479), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHRRWAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + +CRR +IA +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNINKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
S C MCD+C
Sbjct: 467 SPEACNKMCDNC 478
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|440908097|gb|ELR58155.1| ATP-dependent DNA helicase Q1, partial [Bos grunniens mutus]
Length = 649
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHRRWAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + +CRR +IA +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNINKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
S C MCD+C
Sbjct: 467 SPEACNKMCDNC 478
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|149714020|ref|XP_001502209.1| PREDICTED: ATP-dependent DNA helicase Q1 [Equus caballus]
Length = 649
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L+ R++ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDVVKLIHGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNMSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|110625690|ref|NP_075529.2| ATP-dependent DNA helicase Q1 isoform 1 [Mus musculus]
gi|341941960|sp|Q9Z129.2|RECQ1_MOUSE RecName: Full=ATP-dependent DNA helicase Q1; AltName:
Full=DNA-dependent ATPase Q1; AltName: Full=RecQ
protein-like 1
gi|74215762|dbj|BAE23422.1| unnamed protein product [Mus musculus]
gi|74216639|dbj|BAE37751.1| unnamed protein product [Mus musculus]
gi|148678691|gb|EDL10638.1| RecQ protein-like, isoform CRA_b [Mus musculus]
Length = 648
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|148678690|gb|EDL10637.1| RecQ protein-like, isoform CRA_a [Mus musculus]
Length = 645
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|4579744|dbj|BAA75085.1| DNA helicase Q1 [Mus musculus]
Length = 648
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|15928520|gb|AAH14735.1| RecQ protein-like [Mus musculus]
Length = 648
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|326368226|ref|NP_001191836.1| ATP-dependent DNA helicase Q1 isoform 3 [Mus musculus]
gi|74209854|dbj|BAE23625.1| unnamed protein product [Mus musculus]
gi|148678693|gb|EDL10640.1| RecQ protein-like, isoform CRA_d [Mus musculus]
Length = 631
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|4579746|dbj|BAA75086.1| DNA helicase Q1 [Mus musculus]
Length = 631
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|148678692|gb|EDL10639.1| RecQ protein-like, isoform CRA_c [Mus musculus]
Length = 662
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 301 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 360
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 361 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 420
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 421 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 480
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 481 NADACNKMCDNC 492
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 374 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 414
>gi|326368214|ref|NP_001191835.1| ATP-dependent DNA helicase Q1 isoform 2 [Mus musculus]
Length = 634
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|74203917|dbj|BAE28550.1| unnamed protein product [Mus musculus]
Length = 634
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP++ +D +++ L++ R++ QSGIIY S K+ E + L+ G+ YHA
Sbjct: 287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|431908388|gb|ELK11985.1| ATP-dependent DNA helicase Q1 [Pteropus alecto]
Length = 1213
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R+ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 853 YYEVRQKPSNTEDFIEDIVKLINGRYNGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHA 912
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 913 NMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 972
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 973 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 1032
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 1033 NSEACNKMCDNC 1044
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 926 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 966
>gi|148540131|ref|NP_001038561.2| ATP-dependent DNA helicase Q1 [Danio rerio]
gi|71679679|gb|AAI00013.1| RecQ protein-like (DNA helicase Q1-like) [Danio rerio]
Length = 639
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 127/195 (65%), Gaps = 20/195 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +DC D++A L+ R++NQSGI+Y S K+ E + EL+ R + YHA
Sbjct: 293 YYEVRFK--DNEDCTDQIASLIRGRYKNQSGIVYVFSQKDAEVVATELQKRDIVAQPYHA 350
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 351 NMEPSHKSLVHQRWSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAG 410
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CI+++ D+F++S+MV + TG L+N+V+YC + RCRRA++A +FDE W
Sbjct: 411 RDDSPADCIVFFGFMDIFRISTMVVMENTGQQKLHNMVAYCQNVDRCRRAMMAIHFDEVW 470
Query: 211 SDTECRGMCDHCRGG 225
+D EC MCD CR G
Sbjct: 471 NDEECNEMCDVCRHG 485
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct: 364 WSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQ 404
>gi|619863|gb|AAA60261.1| DNA helicase [Homo sapiens]
Length = 659
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 123/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+N G+ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NLEPEDKTTVHRKWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++ RR ++A +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKSRRVLMAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|301787243|ref|XP_002929036.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Ailuropoda
melanoleuca]
Length = 661
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 302 YYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 361
Query: 109 KLE----SNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E +NV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 362 NMEPEDKTNVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAG 421
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 422 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 481
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 482 NSEACNRMCDNC 493
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 375 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQ 415
>gi|45383374|ref|NP_989724.1| ATP-dependent DNA helicase Q1 [Gallus gallus]
gi|23503565|dbj|BAC20377.1| RECQL1 protein [Gallus gallus]
Length = 661
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 131/221 (59%), Gaps = 32/221 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I F ++PN+ +Y+VR KP+ +D ++++ L++ R++ SG
Sbjct: 272 QKCITFTASFNRPNL--------------YYEVRHKPSNNEDFIEDIVKLINGRYKGLSG 317
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y S K+ E + L+ G++ YHA +++ ++AFG+G
Sbjct: 318 IVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVAFGMG 377
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++SSMV + G
Sbjct: 378 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVVMENVGQ 437
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY++VSYC + +CRR +IA +FDE W C MCD+C
Sbjct: 438 EKLYDMVSYCQNMNKCRRVLIACHFDEVWESANCNRMCDNC 478
>gi|281340169|gb|EFB15753.1| hypothetical protein PANDA_019119 [Ailuropoda melanoleuca]
Length = 640
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 127/192 (66%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 281 YYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 340
Query: 109 KLE----SNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E +NV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 341 NMEPEDKTNVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAG 400
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 401 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 460
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 461 NSEACNRMCDNC 472
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 354 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQ 394
>gi|426225386|ref|XP_004006847.1| PREDICTED: ATP-dependent DNA helicase Q1 [Ovis aries]
Length = 649
Score = 187 bits (474), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G+ +YHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGSYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + +CRR +IA +FDE W
Sbjct: 407 RDDSKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNIHKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
S C MCD+C
Sbjct: 467 SPEACNKMCDNC 478
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|290490728|dbj|BAI79324.1| RecQ1 helicae [Gallus gallus]
Length = 607
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 90/221 (40%), Positives = 131/221 (59%), Gaps = 32/221 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I F ++PN+ +Y+VR KP+ +D ++++ L++ R++ SG
Sbjct: 232 QKCITFTASFNRPNL--------------YYEVRHKPSNNEDFIEDIVKLINGRYKGLSG 277
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y S K+ E + L+ G++ YHA +++ ++AFG+G
Sbjct: 278 IVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVAFGMG 337
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++SSMV + G
Sbjct: 338 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVVMENVGQ 397
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY++VSYC + +CRR +IA +FDE W C MCD+C
Sbjct: 398 EKLYDMVSYCQNMNKCRRVLIACHFDEVWESANCNRMCDNC 438
>gi|295151601|gb|ADF81968.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 190
Score = 186 bits (473), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 120/177 (67%), Gaps = 18/177 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++ KP +Q+DCL L L+ R+R SGIIYT SIK+ ED+ L+ RGLRV YHA
Sbjct: 14 YYKILEKPTSQEDCLSILEKLLKYRYRGXSGIIYTNSIKDSEDIANGLKKRGLRVGYYHA 73
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E+ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 74 TMEAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 133
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
RDGQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FD
Sbjct: 134 RDGQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFD 190
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 87 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 127
>gi|57106919|ref|XP_543768.1| PREDICTED: ATP-dependent DNA helicase Q1 [Canis lupus familiaris]
Length = 646
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 287 YYEIRQKPSNTEDVIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRF+IHH +SKS+EN+YQESGRAG
Sbjct: 347 NMEPEDKTRVHRRWSANEIQVVVATVAFGMGIDKPDVRFIIHHSMSKSIENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDMKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NAEACNRMCDNC 478
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRF+IHH +SKS+EN+YQ
Sbjct: 360 WSANEIQVVVATVAFGMGIDKPDVRFIIHHSMSKSIENYYQ 400
>gi|326912433|ref|XP_003202555.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Meleagris gallopavo]
Length = 661
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 131/221 (59%), Gaps = 32/221 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I F ++PN+ +Y+VR KP+ +D ++++ +++ R++ SG
Sbjct: 272 QKCITFTASFNRPNL--------------YYEVRHKPSNNEDFIEDIVKIINGRYKGLSG 317
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y S K+ E + L+ G++ YHA +++ ++AFG+G
Sbjct: 318 IVYCFSQKDSEQVTISLQKLGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVAFGMG 377
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++SSMV + G
Sbjct: 378 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVVMENVGQ 437
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY++VSYC + +CRR +IA +FDE W C MCD+C
Sbjct: 438 EKLYDMVSYCQNMNKCRRVLIARHFDEVWESANCNRMCDNC 478
>gi|355716039|gb|AES05481.1| RecQ protein-like protein [Mustela putorius furo]
Length = 592
Score = 186 bits (472), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R KP+ +D +++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 232 YYEIRQKPSNTEDLFEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 291
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 292 NMEPEDKTDVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAG 351
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 352 RDDLKADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 411
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 412 NSEACNKMCDNC 423
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 305 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQ 345
>gi|410963996|ref|XP_003988543.1| PREDICTED: ATP-dependent DNA helicase Q1 [Felis catus]
Length = 804
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 124/192 (64%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 440 YYEIRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 499
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 500 NMEPEDKTKVHRRWSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQESGRAG 559
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 560 RDDMRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 619
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 620 NSEACNRMCDNC 631
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 513 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSIENYYQ 553
>gi|224095634|ref|XP_002200254.1| PREDICTED: ATP-dependent DNA helicase Q1 [Taeniopygia guttata]
Length = 661
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/218 (40%), Positives = 129/218 (59%), Gaps = 32/218 (14%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+ +Y+VR KP+ +D ++++ ++ R++ SGI+Y
Sbjct: 275 ITFTASFNRPNL--------------YYEVRHKPSNNEDFIEDIVKTINGRYKGMSGIVY 320
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S K+ E + L+ G++ YHA +++ ++AFG+GIDK
Sbjct: 321 CFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGWATNQIQVVVATVAFGMGIDK 380
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANL 184
P+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++SSMV + G L
Sbjct: 381 PDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVVMENVGQEKL 440
Query: 185 YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
Y++VSYC + +CRR +IA +FDE W C MCD+C
Sbjct: 441 YDMVSYCQNMNKCRRVLIAHHFDEVWDSANCNRMCDNC 478
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WATNQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|354482050|ref|XP_003503213.1| PREDICTED: ATP-dependent DNA helicase Q1 [Cricetulus griseus]
gi|344244467|gb|EGW00571.1| ATP-dependent DNA helicase Q1 [Cricetulus griseus]
Length = 648
Score = 186 bits (471), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP +D ++++ L++ R++ +SGIIY S K+ E + L+ G+R YHA
Sbjct: 287 YYEVRQKPPNAEDFIEDIVKLINGRYKGRSGIIYCFSQKDSEQVTISLQKLGIRAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTRVHTQWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDSRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NADACNKMCDNC 478
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|195995715|ref|XP_002107726.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
gi|190588502|gb|EDV28524.1| hypothetical protein TRIADDRAFT_19930 [Trichoplax adhaerens]
Length = 605
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 128/192 (66%), Gaps = 19/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
Y+VR KP++ D ++++ L++ +FRNQSGIIY + KE E + +L ++G+ + YHA
Sbjct: 276 IYEVRQKPSSHTDTINDMVSLINDKFRNQSGIIYCCTRKESETVASDLVSKGIHAAFYHA 335
Query: 109 KLE----SNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E S+V +IAFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 336 DMEMSERSSVHRHWIENKVNVIVGTIAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 395
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ+A CILYYR D FKLS MVF +QTG NLY ++ YC + CRR +IA +F +
Sbjct: 396 RDGQLARCILYYRPLDAFKLSCMVFMEQTGQKNLYKMLQYCNNIKTCRRKLIADHFVDNI 455
Query: 211 SDTECRGMCDHC 222
+ C +CD C
Sbjct: 456 ASCNC-SICDTC 466
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/30 (76%), Positives = 29/30 (96%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 360 TIAFGMGIDKPDVRFVIHHTISKSIENYYQ 389
>gi|449274903|gb|EMC83940.1| ATP-dependent DNA helicase Q1, partial [Columba livia]
Length = 656
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/221 (40%), Positives = 130/221 (58%), Gaps = 32/221 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I F ++PN+ +Y+VR KP+ +D ++++ ++ R++ SG
Sbjct: 267 QKCITFTASFNRPNL--------------YYEVRHKPSNNEDFIEDIVKTINGRYKGLSG 312
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y S K+ E + L+ G++ YHA +++ ++AFG+G
Sbjct: 313 IVYCFSQKDSEQVTVSLQKLGIKAGTYHANMDAKYKTKVHKGWAANQIQVVVATVAFGMG 372
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++SSMV + G
Sbjct: 373 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISSMVVMENVGQ 432
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
LY++VSYC + +CRR +IA +FDE W C MCD+C
Sbjct: 433 EKLYDMVSYCQNMNKCRRVLIARHFDEVWDSANCNRMCDNC 473
>gi|348569184|ref|XP_003470378.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Cavia porcellus]
Length = 650
Score = 185 bits (469), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ +SGIIY S K+ E + L+ G+ YHA
Sbjct: 287 YYEVRQKPSNTEDFIEDIVKLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGIHAGTYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPEDKTKVHTRWSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC + ++CRR +IA +FDE W
Sbjct: 407 RDDMRADCILYYGFGDIFRVSSMVVMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSEACNKMCDNC 478
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|334348257|ref|XP_001365384.2| PREDICTED: ATP-dependent DNA helicase Q1 [Monodelphis domestica]
Length = 655
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 287 YYEVRQKPSNTEDFIEDVVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIQAGAYHA 346
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 347 NMEPKDKTKVHKNWSANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILY D+F++SSMV + G LY +VSYC + +CRR +IA +FDE W
Sbjct: 407 RDDLKADCILYSGFGDIFRISSMVVMENVGQQKLYEMVSYCHNIHKCRRMLIAQHFDEVW 466
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 467 NSAACNKMCDNC 478
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 360 WSANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400
>gi|346466659|gb|AEO33174.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 94/234 (40%), Positives = 144/234 (61%), Gaps = 34/234 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
+ S+ +D+PN+ Y+V KPA + ++ +A L+ RF++Q G
Sbjct: 210 ECSVVLRAPLDRPNL--------------VYEVLPKPAGSDEAVNMVAKLILGRFKDQCG 255
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SNV--------------SIAFGLG 121
I+Y SI+E ++L ++L+ G+ +YHA++E SNV +IAFG+G
Sbjct: 256 IVYCFSIRETDELADQLKGYGIAADSYHAQMEPQRRSNVHTSWMRGELSVIVATIAFGMG 315
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKPNVRFVIHH LSKS+EN+YQESGRAGRD Q + C++ +R DVF+ ++ VF ++ G
Sbjct: 316 IDKPNVRFVIHHTLSKSIENYYQESGRAGRDDQPSTCVILFRFADVFRQTTSVFAEKCGQ 375
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-GMCDHCRGGRRDAKRVDV 234
N+Y++V YC+D +CRRA+ +F E D +C+ G+CD+CR + K +DV
Sbjct: 376 ENVYSVVRYCVDVHKCRRAMFLQHFGEKQQDIQCQYGICDNCR-AKGSVKDIDV 428
>gi|351704749|gb|EHB07668.1| ATP-dependent DNA helicase Q1 [Heterocephalus glaber]
Length = 677
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 87/192 (45%), Positives = 122/192 (63%), Gaps = 19/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ +D ++++ L++ R++ QSGIIY S K+ E + L+ G+ AYHA
Sbjct: 322 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIHAGAYHA 381
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VR+VIHH +SKSMEN+YQESGRAG
Sbjct: 382 NMEPEDKTKVHTRWSANELQVVVATVAFGMGIDKPDVRYVIHHSMSKSMENYYQESGRAG 441
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILYY D+F++SSMV + G LY +VSYC ++CRR +IA +FDE W
Sbjct: 442 RDDMRADCILYYGFGDIFRISSMVVMENVGQQKLYEMVSYC-QNSKCRRVLIAQHFDEVW 500
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 501 NSEACNKMCDNC 512
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VR+VIHH +SKSMEN+YQ
Sbjct: 395 WSANELQVVVATVAFGMGIDKPDVRYVIHHSMSKSMENYYQ 435
>gi|312379036|gb|EFR25440.1| hypothetical protein AND_09184 [Anopheles darlingi]
Length = 532
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 91/195 (46%), Positives = 123/195 (63%), Gaps = 32/195 (16%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
SI F ++PN+ +Y V KP ++KD + L L+ +RF QSGI+
Sbjct: 272 SILFVASFNRPNL--------------YYHVLEKPLSKKDQYEVLESLLEKRFHKQSGIV 317
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
YT SIK+ E++ EELR RGL+V+ YHA L + ++AFG+GID
Sbjct: 318 YTFSIKDAEEISEELRERGLKVAPYHATLPAADRTKIHQLWIANRLQAVIATVAFGMGID 377
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH LSKSMENFYQE+GRAGRDGQ A CIL Y D+F++S+M+F + TGL N
Sbjct: 378 KPDVRFVIHHTLSKSMENFYQETGRAGRDGQPADCILLYHFSDMFRISTMMFSEYTGLQN 437
Query: 184 LYNIVSYCLDQTRCR 198
Y +V YC++++ CR
Sbjct: 438 AYAMVDYCINRSECR 452
>gi|297851930|ref|XP_002893846.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
gi|297339688|gb|EFH70105.1| RECQL2 [Arabidopsis lyrata subsp. lyrata]
Length = 704
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 137/231 (59%), Gaps = 36/231 (15%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF-RNQSGII 81
+ F +++PN+ FY VR K A K +DE+A+ + + N+SGI+
Sbjct: 272 VKFVSSVNRPNL--------------FYSVREKSAVGKVVVDEIAEFIRESYSNNESGIV 317
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGID 123
Y S KECE + +LR RG+ YHA +++N+ ++AFG+GI+
Sbjct: 318 YCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGIN 377
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH LSKSME +YQESGRAGRDG + CIL++R DV + SSMVF + +GL N
Sbjct: 378 KPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQN 437
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
LY+IV YC +T+CRR+ +F E D C GMCD+C + K VDV
Sbjct: 438 LYDIVRYCQSKTKCRRSAFFRHFGEPSQD--CNGMCDNC-ALSSEVKEVDV 485
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 358 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 398
>gi|395538504|ref|XP_003771219.1| PREDICTED: ATP-dependent DNA helicase Q1 [Sarcophilus harrisii]
Length = 780
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 121/192 (63%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR KP+ D ++++ L++ R++ QSGIIY S K+ E + L+ G++ AYHA
Sbjct: 413 YYEVRQKPSNTDDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 472
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct: 473 NMEPRDKTAVHKKWSANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 532
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A CILY D+F++S+MV + G LY +VSYC + +CRR +IA +FDE W
Sbjct: 533 RDDLKADCILYSGFGDIFRISTMVVMENVGQQKLYEMVSYCHNMHKCRRMLIAQHFDEVW 592
Query: 211 SDTECRGMCDHC 222
+ C MCD+C
Sbjct: 593 NSAACNKMCDNC 604
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 486 WSANKIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 526
>gi|30692489|ref|NP_174421.2| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|75334308|sp|Q9FT73.1|MED34_ARATH RecName: Full=Mediator of RNA polymerase II transcription subunit
34; AltName: Full=ATP-dependent DNA helicase Q-like 2;
AltName: Full=RecQ-like protein 2; Short=AtRecQ2;
Short=AtRecQl2
gi|11121445|emb|CAC14866.1| DNA Helicase [Arabidopsis thaliana]
gi|332193225|gb|AEE31346.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 705
Score = 182 bits (463), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 137/231 (59%), Gaps = 36/231 (15%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF-RNQSGII 81
+ F +++PN+ FY VR K A K +DE+A+ + + N+SGI+
Sbjct: 273 VKFVSSVNRPNL--------------FYSVREKSAVGKLVVDEIAEFIRESYSNNESGIV 318
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGID 123
Y S KECE + +LR RG+ YHA +++N+ ++AFG+GI+
Sbjct: 319 YCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGIN 378
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH LSKSME +YQESGRAGRDG + CIL++R DV + SSMVF + +GL N
Sbjct: 379 KPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQN 438
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
LY+IV YC +T+CRR+ +F E D C GMCD+C + K VDV
Sbjct: 439 LYDIVRYCQSKTKCRRSAFFRHFGEPSQD--CNGMCDNC-ALSSEVKEVDV 486
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|145324100|ref|NP_001077639.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
gi|332193226|gb|AEE31347.1| ATP-dependent DNA helicase Q-like 2 [Arabidopsis thaliana]
Length = 580
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/231 (42%), Positives = 137/231 (59%), Gaps = 36/231 (15%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF-RNQSGII 81
+ F +++PN+ FY VR K A K +DE+A+ + + N+SGI+
Sbjct: 148 VKFVSSVNRPNL--------------FYSVREKSAVGKLVVDEIAEFIRESYSNNESGIV 193
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGID 123
Y S KECE + +LR RG+ YHA +++N+ ++AFG+GI+
Sbjct: 194 YCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGIN 253
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH LSKSME +YQESGRAGRDG + CIL++R DV + SSMVF + +GL N
Sbjct: 254 KPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFYEYSGLQN 313
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
LY+IV YC +T+CRR+ +F E D C GMCD+C + K VDV
Sbjct: 314 LYDIVRYCQSKTKCRRSAFFRHFGEPSQD--CNGMCDNC-ALSSEVKEVDV 361
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 234 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 274
>gi|241829138|ref|XP_002414740.1| DNA helicase recq1, putative [Ixodes scapularis]
gi|215508952|gb|EEC18405.1| DNA helicase recq1, putative [Ixodes scapularis]
Length = 619
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/224 (42%), Positives = 134/224 (59%), Gaps = 32/224 (14%)
Query: 29 IDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKE 88
+D+PN+R Y+V KP+ Q + L+ L L+ RFR QSGI+Y SIK+
Sbjct: 271 LDRPNLR--------------YEVCSKPSGQAEVLETLVGLLLGRFRGQSGIVYCFSIKD 316
Query: 89 CEDLREELRNRGLRVSAYHAKLE----SNV--------------SIAFGLGIDKPNVRFV 130
++ L G+R Y+A ++ S+V ++AFG+GIDKP+VRFV
Sbjct: 317 THEVASGLCQHGIRADCYNANMDHKDRSDVHFRWSHNEIDVVVATVAFGMGIDKPDVRFV 376
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSY 190
IHH +SKS+EN+YQESGRAGRD A CI+ YR D+F+ ++ VF ++TG N+Y +VSY
Sbjct: 377 IHHTMSKSVENYYQESGRAGRDDAPAVCIVMYRFADIFRQTTSVFAEKTGQENVYAMVSY 436
Query: 191 CLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
C + RCRRA++ +F E +T C GMCD+C K VDV
Sbjct: 437 CTEARRCRRAVLCQHFGENREETCCNGMCDNCDSTVSSTKEVDV 480
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 29/30 (96%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 361 TVAFGMGIDKPDVRFVIHHTMSKSVENYYQ 390
>gi|358342600|dbj|GAA27215.2| ATP-dependent DNA helicase Q1, partial [Clonorchis sinensis]
Length = 537
Score = 179 bits (454), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 94/229 (41%), Positives = 137/229 (59%), Gaps = 21/229 (9%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGI 80
V + LG+ +P+ V+ C ++ +Y+VR K + +L L+ R+ QSGI
Sbjct: 164 VDVQSMLGL-QPDKCLVVRSCYNRK-NLYYEVRTTCGPPKSAVQQLYLLIQNRYCGQSGI 221
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGI 122
IY S K+ ED+ ELR GLRV+ YHA ++ N ++AFG+GI
Sbjct: 222 IYCFSQKDTEDVAGELRRMGLRVAHYHANMDGNARARVHTDWFTGKILIIVATVAFGMGI 281
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA 182
DKP+VRFV+H SKS+EN+YQESGRAGRD + A C++ +R D F+L+SMV ++TGL+
Sbjct: 282 DKPDVRFVLHFSASKSLENYYQESGRAGRDSEAAECVVLWRFSDFFRLASMVSSERTGLS 341
Query: 183 NLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRGMCDHCRGGRRDAK 230
L IV+YCLD CRR +I+ + D+ WS ++C CD+CR + K
Sbjct: 342 KLLQIVAYCLDPVTCRRLLISKHLDDPTWSASDCAESCDNCRRAKSKDK 390
>gi|224074554|ref|XP_002304389.1| predicted protein [Populus trichocarpa]
gi|222841821|gb|EEE79368.1| predicted protein [Populus trichocarpa]
Length = 718
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRN-QSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY VR K + K +DE+A+ + + N +SGI+Y S KECE + ELR RG+ YH
Sbjct: 289 FYTVRSKSSVGKVVVDEIAEFIQESYSNSESGIVYCFSRKECEQVAAELRERGIAADYYH 348
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ N ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 349 ADMDVNAREKVHTWWSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 408
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+L+YR DV + SSMVF + +GL NLY+IV YC + +CRR +F E
Sbjct: 409 GRDGLPSECVLFYRPADVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRNAFFRHFAEP 468
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 469 LQD--CNGMCDNC 479
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 363 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 403
>gi|91075962|ref|XP_969092.1| PREDICTED: similar to MGC131022 protein [Tribolium castaneum]
gi|270014620|gb|EFA11068.1| hypothetical protein TcasGA2_TC004664 [Tribolium castaneum]
Length = 608
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/203 (43%), Positives = 123/203 (60%), Gaps = 28/203 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV KPA + L+ L LM+ ++ QSGIIYT +I EC L L+ LRV+ +HA
Sbjct: 284 FYQVLPKPATKDGVLNYLEKLMTEKYAGQSGIIYTNTINECISLATALKGSNLRVAPFHA 343
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+LE ++AFG+GIDKP+VRFVIHH + +SME+ YQESGRAG
Sbjct: 344 QLEPEQKKKIHRKWLDNTYQAVVATVAFGMGIDKPDVRFVIHHVIPRSMESLYQESGRAG 403
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA---NLYNIVSYCLDQTRCRRAIIASYFD 207
RDG+ A CI+ + L D K+S+M T L ++ YC+++ RCRR+IIA+YF+
Sbjct: 404 RDGKRADCIVLFSLNDYLKISAM----STSLVEEKKAQQVLEYCVERLRCRRSIIATYFE 459
Query: 208 EAWSDTECRGMCDHCRGGRRDAK 230
+ W ++C MCD C +RD K
Sbjct: 460 QVWETSDCNKMCDIC---KRDVK 479
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + YQ ++AFG+GIDKP+VRFVIHH + +SME+ YQ
Sbjct: 357 WLDNTYQAVVATVAFGMGIDKPDVRFVIHHVIPRSMESLYQ 397
>gi|356531519|ref|XP_003534325.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Glycine max]
Length = 695
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 126/205 (61%), Gaps = 22/205 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY V+ K + K +DE+A+ + + N+SGI+Y S KECE + +ELR RG+ YH
Sbjct: 283 FYMVKEKSSVGKVVIDEIAEFIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYH 342
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ N ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 343 ADMDVNAREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 402
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LY+R D + SSMVF + +GL NLY+IV YCL + +CRR+ +F E
Sbjct: 403 GRDGLPSECLLYFRPGDAPRQSSMVFYENSGLQNLYDIVRYCLSKRQCRRSAFFHHFAEP 462
Query: 210 WSDTECRGMCDHCRGGRRDAKRVDV 234
EC GMCD C + K VDV
Sbjct: 463 LQ--ECNGMCDIC-AFSSEVKEVDV 484
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 357 WSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 397
>gi|449669780|ref|XP_002159097.2| PREDICTED: ATP-dependent DNA helicase Q1-like [Hydra
magnipapillata]
Length = 638
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 125/192 (65%), Gaps = 18/192 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ + + ++E+A + RF+ +SGI+Y S K+ E++ L G+ YHA
Sbjct: 283 FYEVKHTLLSPSELVNEIATCIKSRFKEESGIVYCFSRKDSEEVSTLLNRHGINSHCYHA 342
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ S+V +IAFG+GIDKPNVRFVIH+ LSKS+EN+YQESGRAG
Sbjct: 343 DISSDVKTKVHQLWIKGDIQVIVATIAFGMGIDKPNVRFVIHYSLSKSIENYYQESGRAG 402
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG A+CILY+R D+F+ SMVF ++TGL +Y ++ YC+++ +CRR II+ F+EAW
Sbjct: 403 RDGHNAYCILYFRFQDIFRQMSMVFSEKTGLEKVYQMLRYCIEKKQCRRNIISLDFEEAW 462
Query: 211 SDTECRGMCDHC 222
++ MCD+C
Sbjct: 463 KTSDSCKMCDNC 474
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/42 (66%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW QV +IAFG+GIDKPNVRFVIH+ LSKS+EN+YQ
Sbjct: 355 LWIKGDIQVIVATIAFGMGIDKPNVRFVIHYSLSKSIENYYQ 396
>gi|256081389|ref|XP_002576953.1| DNA helicase recq1 [Schistosoma mansoni]
gi|353232363|emb|CCD79718.1| putative dna helicase recq1 [Schistosoma mansoni]
Length = 652
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/231 (41%), Positives = 140/231 (60%), Gaps = 29/231 (12%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQ--KDCLDELADLMSRRFRNQSGIIY 82
GL +DK V+ ++ N+Y +KP + K + L +L+++ + NQSGI+Y
Sbjct: 292 LGLNVDKC---LVLRTSYNRENLNYY---VKPVSGSIKASVKYLYELINKNYINQSGIVY 345
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S K+ ED+ EL+N GL+V+ YHA L+ N ++AFG+GIDK
Sbjct: 346 CFSQKDTEDVSSELKNFGLKVAPYHANLDFNYRSTVHSGWSQGKIQVIVATVAFGMGIDK 405
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANL 184
+VRFVIH SKS+EN+YQESGRAGRD A CIL +R D+F+L+SMV ++TG+A L
Sbjct: 406 ADVRFVIHFSSSKSLENYYQESGRAGRDSNSADCILMWRFSDLFRLASMVSSERTGIAKL 465
Query: 185 YNIVSYCLDQTRCRRAIIASYF-DEAWSDTECRGMCDHCRGGRRDAKRVDV 234
Y +V YC+D +CRR +I+ D +WS +C+ CD+C+ R+ + DV
Sbjct: 466 YQMVGYCIDPNKCRRYLISKNLGDTSWSTDDCKNACDNCQ--RKSTNKSDV 514
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV ++AFG+GIDK +VRFVIH SKS+EN+YQ
Sbjct: 385 WSQGKIQVIVATVAFGMGIDKADVRFVIHFSSSKSLENYYQ 425
>gi|359474777|ref|XP_002267000.2| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Vitis
vinifera]
Length = 711
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/231 (42%), Positives = 133/231 (57%), Gaps = 36/231 (15%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF-RNQSGII 81
I F +++PN+ FY VR K + + +DE+A+ + + N+SGI+
Sbjct: 273 IKFVSTVNRPNL--------------FYMVREKSSVGRVVIDEIAEYIQESYPNNESGIV 318
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGID 123
Y S KECE + +ELR RG+ YHA ++ N ++AFG+GI+
Sbjct: 319 YCFSRKECEQVAKELRERGISADYYHADMDVNARERVHLRWSNSKLQVIVGTVAFGMGIN 378
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH LSKSME +YQESGRAGRDG + C+LY+R DV + SSMVF + +GL N
Sbjct: 379 KPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQN 438
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
LY+IV YC + CRR +F E D C GMCD+C + K VDV
Sbjct: 439 LYDIVQYCQSKRECRRNAFFRHFAEPLQD--CNGMCDNC-AFSTEVKEVDV 486
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|296085510|emb|CBI29242.3| unnamed protein product [Vitis vinifera]
Length = 710
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 125/205 (60%), Gaps = 22/205 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY VR K + + +DE+A+ + + N+SGI+Y S KECE + +ELR RG+ YH
Sbjct: 285 FYMVREKSSVGRVVIDEIAEYIQESYPNNESGIVYCFSRKECEQVAKELRERGISADYYH 344
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ N ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 345 ADMDVNARERVHLRWSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LY+R DV + SSMVF + +GL NLY+IV YC + CRR +F E
Sbjct: 405 GRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVQYCQSKRECRRNAFFRHFAEP 464
Query: 210 WSDTECRGMCDHCRGGRRDAKRVDV 234
D C GMCD+C + K VDV
Sbjct: 465 LQD--CNGMCDNC-AFSTEVKEVDV 486
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSNSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|47217239|emb|CAF96762.1| unnamed protein product [Tetraodon nigroviridis]
Length = 523
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 123/196 (62%), Gaps = 18/196 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR+K + ++++A L+ R+R QSGI+Y S K+ E + EL+ R + YHA
Sbjct: 216 YYEVRVKNSDNDASVNDIASLIKTRYREQSGIVYVFSQKDAESVSSELQKRDILAYPYHA 275
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 276 NMDPSDKSRIHRRWTTNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSVENYYQESGRAG 335
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD + A CI+++ D+F++S+MV + G L ++ YC + RCRR+++A +FDE W
Sbjct: 336 RDDRPADCIVFFGFSDIFRVSTMVVMETVGQQKLRQMLDYCQNIDRCRRSLLAVHFDEVW 395
Query: 211 SDTECRGMCDHCRGGR 226
D C+ MCD CR +
Sbjct: 396 DDEGCQQMCDTCRHAK 411
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 289 WTTNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSVENYYQ 329
>gi|410931808|ref|XP_003979287.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Takifugu
rubripes]
Length = 610
Score = 176 bits (446), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 125/204 (61%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR+K ++++A L+ ++++QSGI+Y S K+ E + L+ RG+ S YHA
Sbjct: 298 YYEVRVKNCDSDASVEDMASLIKSKYQHQSGIVYVFSQKDAESVSSALQKRGILASPYHA 357
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 358 NMDPTDKSHVHRRWSTNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 417
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A C++Y+ D+F++S+MV + G L ++ YC RCRR+++A +FDE W
Sbjct: 418 RDDCPADCVIYFGFSDIFRISTMVVMENVGQQKLRQMLDYCQSIDRCRRSLMAVHFDEVW 477
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D C+ MCD CR +D VD+
Sbjct: 478 DDEGCQQMCDTCRHP-KDVSTVDI 500
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 39/52 (75%), Gaps = 4/52 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDC 62
W T+ QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ + A + DC
Sbjct: 371 WSTNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGR-AGRDDC 421
>gi|427789035|gb|JAA59969.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 640
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 88/223 (39%), Positives = 132/223 (59%), Gaps = 33/223 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
+ ++ +D+PN+ Y+V KP+A + + +A ++ RF+NQ G
Sbjct: 262 ESAVVLRAPLDRPNL--------------VYEVLAKPSANDEAVKMIARIILGRFKNQCG 307
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+Y SIKE ++L +EL+ G+ V +YHA +E + +IAFG+G
Sbjct: 308 IVYCFSIKETDELADELKGYGIAVDSYHASMEPHRRSSVHTRWMHGKILVIVATIAFGMG 367
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDK NVRFVIHH +SKS+EN+YQESGRAGRD Q A C++ +R D+F+ ++ VF ++ G
Sbjct: 368 IDKSNVRFVIHHTMSKSVENYYQESGRAGRDDQPATCLILFRFADIFRQTTSVFTEKCGR 427
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-GMCDHCR 223
N+Y +V YC+D CRRA+ +F E D C G+CD+CR
Sbjct: 428 ENVYTMVRYCVDVHECRRAMFLRHFGEKQQDIRCHDGICDNCR 470
>gi|255557667|ref|XP_002519863.1| DNA helicase recq1, putative [Ricinus communis]
gi|223540909|gb|EEF42467.1| DNA helicase recq1, putative [Ricinus communis]
Length = 714
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/193 (46%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY VR K + K +DE+A+ + + N+SGI+Y S KECE + +LR RG+ YH
Sbjct: 292 FYMVREKSSVGKVVIDEIAEFIRESYPNNESGIVYCFSRKECEQVAADLRERGISADYYH 351
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ N ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 352 ADMDVNAREKVHMRWSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 411
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+L++R DV + SSMVF + +GL NLY+IV YC + CRR+ +F E
Sbjct: 412 GRDGAPSECVLFFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRTCRRSAFFRHFSEP 471
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 472 LQD--CNGMCDNC 482
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 366 WSQNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 406
>gi|348537236|ref|XP_003456101.1| PREDICTED: ATP-dependent DNA helicase Q1 [Oreochromis niloticus]
Length = 651
Score = 176 bits (445), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/204 (40%), Positives = 126/204 (61%), Gaps = 19/204 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VRIK + + ++++A L+ ++++QSGI+Y S K+ E + EL+ R + YHA
Sbjct: 306 YYEVRIKDSDSEASVNDIAALIKSKYKDQSGIVYVFSQKDAELVSAELQKRDILAYPYHA 365
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 366 NMDSEDKSRVHRKWTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 425
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD A C++++ D+F++S+MV + G L +V YC + RCRR+++A +FDE W
Sbjct: 426 RDDSPADCVVFFGFADIFRISTMVVMENVGQQKLLQMVDYCQNVDRCRRSLMAVHFDEVW 485
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
D C MCD C +D VD+
Sbjct: 486 DDEGCNQMCDTCSQA-KDYPTVDI 508
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 379 WTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 419
>gi|357484579|ref|XP_003612577.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
gi|355513912|gb|AES95535.1| ATP-dependent DNA helicase RecQ family protein expressed [Medicago
truncatula]
Length = 685
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRN-QSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY V+ K + K +DE+A+ + + N +SGI+Y S KECE + +ELR RG+ YH
Sbjct: 268 FYMVKEKSSVSKVVVDEIAEFIQESYPNHESGIVYCFSRKECEQVAKELRERGISAGHYH 327
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ N ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 328 ADMDVNDREKVHMRWSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 387
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LY+R DV + SSMVF + +GL NLY+IV YC + +CRR+ +F E
Sbjct: 388 GRDGLPSECLLYFRPGDVPRQSSMVFYENSGLQNLYDIVRYCQSKRQCRRSAFFRHFAEP 447
Query: 210 WSDTECRGMCDHC 222
EC GMCD C
Sbjct: 448 LQ--ECNGMCDIC 458
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 342 WSNNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 382
>gi|357113938|ref|XP_003558758.1| PREDICTED: ATP-dependent DNA helicase Q-like 2-like [Brachypodium
distachyon]
Length = 704
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/193 (46%), Positives = 121/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRN-QSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+V K + K +DE+A+ ++ + N +SGI+Y S KECE + +ELR RG+ YH
Sbjct: 285 YYKVYEKSSVGKVVIDEIANFITESYPNKESGIVYCFSRKECEQVAKELRERGIAADYYH 344
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S ++AFG+GI+KP+VRFV+HH LSKSME +YQESGRA
Sbjct: 345 ADMDSVAREKVHMRWSKSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 405 GRDGLPSECVLYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKKSCRRGAFFQHFGEA 464
Query: 210 WSDTECRGMCDHC 222
EC GMCD+C
Sbjct: 465 VQ--ECNGMCDNC 475
Score = 58.2 bits (139), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFV+HH LSKSME +YQ
Sbjct: 359 WSKSKSQVIVGTVAFGMGINKPDVRFVVHHSLSKSMETYYQ 399
>gi|108864716|gb|ABA95537.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|215701406|dbj|BAG92830.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 665
Score = 173 bits (438), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 184 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 243
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 244 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 303
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 304 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 363
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 364 AQD--CNGMCDNC 374
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 258 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 298
>gi|108936937|dbj|BAE96002.1| RecQ-like helicase 2 [Oryza sativa Japonica Group]
Length = 768
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 287 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 346
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 347 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 406
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 407 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 466
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 467 AQD--CNGMCDNC 477
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 361 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 401
>gi|108864717|gb|ABA95535.2| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 766
Score = 172 bits (437), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 285 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 405 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 464
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 465 AQD--CNGMCDNC 475
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|77552739|gb|ABA95536.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 707
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 285 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 405 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 464
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 465 AQD--CNGMCDNC 475
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|115486841|ref|NP_001068564.1| Os11g0708600 [Oryza sativa Japonica Group]
gi|113645786|dbj|BAF28927.1| Os11g0708600, partial [Oryza sativa Japonica Group]
Length = 685
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 204 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 263
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 264 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 323
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 324 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 383
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 384 AQD--CNGMCDNC 394
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 278 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 318
>gi|77552741|gb|ABA95538.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
Length = 556
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 120/193 (62%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+A+ +S + N+SGI+Y S KECE + +EL RG+ YH
Sbjct: 285 FYKVFEKSPVGKVVIDEIANFISESYPNNESGIVYCFSRKECEQVAKELSERGILADYYH 344
Query: 108 A-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A KL+ V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 345 ADMDVISREKVHMRWSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CRR +F EA
Sbjct: 405 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRRGAFFRHFGEA 464
Query: 210 WSDTECRGMCDHC 222
D C GMCD+C
Sbjct: 465 AQD--CNGMCDNC 475
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSKSKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|293332763|ref|NP_001168975.1| uncharacterized protein LOC100382802 [Zea mays]
gi|223974195|gb|ACN31285.1| unknown [Zea mays]
Length = 710
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 122/205 (59%), Gaps = 22/205 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V K K +DE+ +S + N+SGIIY S KECE + +ELR RG+ YH
Sbjct: 285 FYKVSEKSPVGKVVIDEITKFISESYPNNESGIIYCFSRKECEQVAKELRERGISADYYH 344
Query: 108 AKLE---------------SNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ S V ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 345 ADMDIVNREKIHMRWSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 404
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + CILYYR DV + SSMVF + GL NLY+IV YC + CR +F E
Sbjct: 405 GRDGLPSECILYYRPGDVPRQSSMVFYENCGLQNLYDIVRYCQSKRSCRHGAFFRHFGEV 464
Query: 210 WSDTECRGMCDHCRGGRRDAKRVDV 234
D C GMCD+C + K +DV
Sbjct: 465 PQD--CNGMCDNC-ASTIEQKDIDV 486
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 359 WSKGKSQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399
>gi|302811147|ref|XP_002987263.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
gi|300144898|gb|EFJ11578.1| hypothetical protein SELMODRAFT_125799 [Selaginella moellendorffii]
Length = 711
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 117/193 (60%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR K D ++++A + + N+SGI+Y S KECE + + LR R + + YH
Sbjct: 273 FYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYH 332
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S + ++AFG+GI+KP+VRFVIHH LSKS+E +YQESGRA
Sbjct: 333 ADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRA 392
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LY+R DV + S MVF + TGL NLY + YC + RCRRA YF E
Sbjct: 393 GRDGLPSRCVLYFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQRCRRAAFFQYFAEQ 452
Query: 210 WSDTECRGMCDHC 222
EC GMCD C
Sbjct: 453 VQ--ECNGMCDTC 463
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ QV ++AFG+GI+KP+VRFVIHH LSKS+E +YQ
Sbjct: 347 WSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQ 387
>gi|339243055|ref|XP_003377453.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
gi|316973743|gb|EFV57302.1| ATP-dependent DNA helicase Q1 [Trichinella spiralis]
Length = 605
Score = 169 bits (429), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 118/204 (57%), Gaps = 18/204 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV+ KP ++ L + L+ +F QSGIIY S K+ E + LR G++ YHA
Sbjct: 284 FYQVQQKPDRPEELLQIVCKLLKGQFSGQSGIIYCFSKKDSETFAQNLRTNGVKAEHYHA 343
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ N ++AFG+GIDK +VR VIH L KS+EN+YQESGRAG
Sbjct: 344 DMDPNERGMVHRKWLSNKCQVIVATVAFGMGIDKADVRVVIHLALPKSVENYYQESGRAG 403
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDGQ A C+LY+ D+F+LS V +++ GL NLY +++YC CRR A +FDE W
Sbjct: 404 RDGQPASCLLYFGFADLFRLSVTVCNERNGLENLYKMLAYCTGLASCRRRYFADHFDEQW 463
Query: 211 SDTECRGMCDHCRGGRRDAKRVDV 234
T C+ CD+C+ + DV
Sbjct: 464 KPTWCQSACDNCQRPPGSVHQQDV 487
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ QV ++AFG+GIDK +VR VIH L KS+EN+YQ
Sbjct: 357 WLSNKCQVIVATVAFGMGIDKADVRVVIHLALPKSVENYYQ 397
>gi|168029873|ref|XP_001767449.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681345|gb|EDQ67773.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 655
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 118/193 (61%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR K A +D++A + ++ + +SGI+Y S KECE + ELR RG+ + YH
Sbjct: 280 FYEVREKKANGSAAIDDIASFILDKYSKKESGIVYCFSRKECEQVAAELRKRGISAAHYH 339
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++ ++AFG+GI+KP+VRFVIHH LSKS+E +YQESGRA
Sbjct: 340 ADMKPETRSSVHMRWSTNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQESGRA 399
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG AHC+LY+R D+ + SSMVF + GL NLY I +C + CRRA +F E
Sbjct: 400 GRDGLPAHCLLYFRPADLPRQSSMVFAEMAGLHNLYAICRFCQSKQACRRAAFFRHFGEK 459
Query: 210 WSDTECRGMCDHC 222
+C GMCD+C
Sbjct: 460 IQ--KCNGMCDNC 470
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ QV ++AFG+GI+KP+VRFVIHH LSKS+E +YQ
Sbjct: 354 WSTNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSLETYYQ 394
>gi|302789379|ref|XP_002976458.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
gi|300156088|gb|EFJ22718.1| hypothetical protein SELMODRAFT_105080 [Selaginella moellendorffii]
Length = 711
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 117/193 (60%), Gaps = 21/193 (10%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR K D ++++A + + N+SGI+Y S KECE + + LR R + + YH
Sbjct: 273 FYEVRDKKQVAADVIEDIALFIKETYPSNESGIVYCFSRKECEQVADALRKRQISAAHYH 332
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S + ++AFG+GI+KP+VRFVIHH LSKS+E +YQESGRA
Sbjct: 333 ADMDSGLRTNVHRRWSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQESGRA 392
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+L++R DV + S MVF + TGL NLY + YC + RCRRA YF E
Sbjct: 393 GRDGLPSRCVLFFRPADVPRQSCMVFSENTGLQNLYAMARYCQSKQRCRRAAFFQYFAEQ 452
Query: 210 WSDTECRGMCDHC 222
EC GMCD C
Sbjct: 453 VQ--ECNGMCDTC 463
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ QV ++AFG+GI+KP+VRFVIHH LSKS+E +YQ
Sbjct: 347 WSSNQLQVIVGTVAFGMGINKPDVRFVIHHTLSKSLETYYQ 387
>gi|449453437|ref|XP_004144464.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 738
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 117/188 (62%), Gaps = 21/188 (11%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY VR K + K +D++A+ + + N+SGIIY S KECE + +ELR RG+ YH
Sbjct: 286 FYMVREKSSVSKVVIDQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYH 345
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 346 ADMDSVAREKVHMRWSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 405
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LYYR DV + SSMVF + +GL NLY IV YC + +CRR++ +F E
Sbjct: 406 GRDGLPSECLLYYRPGDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEP 465
Query: 210 WSDTECRG 217
D C G
Sbjct: 466 LKD--CNG 471
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 400
>gi|432943336|ref|XP_004083165.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Oryzias latipes]
Length = 802
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 18/193 (9%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR+K + L +++ L+ R++ QSGI+Y S K+ E + L+ G++ YHA
Sbjct: 300 YYEVRVKDSDSDLSLSDISSLIKNRYKEQSGIVYVFSQKDAESVSSALQKSGIQAYPYHA 359
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAG
Sbjct: 360 NMDPEDKSRVHRKWTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAG 419
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RD + A CI+Y+ D+F++S+MV + G L +V +C + RCRR+++A +FDE W
Sbjct: 420 RDDRPADCIVYFGFADIFRISTMVVMESVGQKKLLQMVDFCQNVDRCRRSLMAVHFDEVW 479
Query: 211 SDTECRGMCDHCR 223
D +C MCD CR
Sbjct: 480 DDEDCNQMCDTCR 492
Score = 60.1 bits (144), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++ QV ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 373 WTSNKIQVVVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 413
>gi|449516333|ref|XP_004165201.1| PREDICTED: mediator of RNA polymerase II transcription subunit
34-like [Cucumis sativus]
Length = 586
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 117/188 (62%), Gaps = 21/188 (11%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY VR K + K +D++A+ + + N+SGIIY S KECE + +ELR RG+ YH
Sbjct: 286 FYMVREKSSVSKVVIDQIAEFIQESYPNNESGIIYCFSRKECEQVAKELRLRGISADHYH 345
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S ++AFG+GI+KP+VRFVIHH LSKSME +YQESGRA
Sbjct: 346 ADMDSVAREKVHMRWSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQESGRA 405
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG + C+LYYR DV + SSMVF + +GL NLY IV YC + +CRR++ +F E
Sbjct: 406 GRDGLPSECLLYYRPGDVPRQSSMVFYENSGLENLYGIVQYCQSRRQCRRSVFFRHFAEP 465
Query: 210 WSDTECRG 217
D C G
Sbjct: 466 LKD--CNG 471
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W S QV ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct: 360 WSNSRLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 400
>gi|198427281|ref|XP_002131591.1| PREDICTED: similar to RECQL1 protein [Ciona intestinalis]
Length = 697
Score = 162 bits (411), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/201 (39%), Positives = 120/201 (59%), Gaps = 18/201 (8%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR KP + + ++ + F+ +SGIIY S + C D+ L G+R + YHA
Sbjct: 363 FYEVRPKPTTHQKVVQDIVTTIQENFKGESGIIYCISCRNCTDVCNSLIKSGIRAAVYHA 422
Query: 109 ----KLESNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K +S V ++AFG+GI+KP VRFVIHH +SKS+EN++QE+GRAG
Sbjct: 423 RCSAKKKSEVHQQWLNNEIQVICATVAFGMGINKPQVRFVIHHSISKSVENYFQEAGRAG 482
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
RDG+ + C+LY+ DVF+ +SMVF ++TG NL +V +C + CR ++A++F E
Sbjct: 483 RDGKPSLCLLYFGFWDVFRQTSMVFRERTGTENLSKVVKFCHNLKTCRVELLANHFGEVN 542
Query: 211 SDTECRGMCDHCRGGRRDAKR 231
+ GMCD C ++ K+
Sbjct: 543 EQCQSPGMCDVCSNLQKTTKK 563
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+KP VRFVIHH +SKS+EN++Q
Sbjct: 436 WLNNEIQVICATVAFGMGINKPQVRFVIHHSISKSVENYFQ 476
>gi|170587310|ref|XP_001898420.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
gi|158594144|gb|EDP32732.1| ATP-dependent DNA helicase, RecQ family protein [Brugia malayi]
Length = 585
Score = 160 bits (405), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 134/225 (59%), Gaps = 35/225 (15%)
Query: 31 KPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMS-------RRFRNQSGIIYT 83
+P+ +F+ + L + + + + A D +D++ +++ R N+ + Y+
Sbjct: 228 RPDFKFL--NVLKRQFQAVPLIGLTATATADVIDDVKNMLGIPAAVVFRAGFNRPNLHYS 285
Query: 84 -----TSIKECEDLREEL---RNRGLRVSAYHAKLESN------------------VSIA 117
+S E D+ EL R +G++ S YHA L++ ++A
Sbjct: 286 VCQKPSSDAEFVDILVELIKTRAKGVKASHYHAFLDAGKRNITHEKWLNGGINVIVATVA 345
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
FG+GIDKPNVR+VIHH L KS+EN+YQESGR GRDG AHCIL+YRL D+F+ S+MV +
Sbjct: 346 FGMGIDKPNVRYVIHHSLPKSLENYYQESGRVGRDGNEAHCILFYRLNDLFRQSTMVCTE 405
Query: 178 QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+TG+ NLY+++SYC++ + CRR++IA +F+ W+ + C MCD C
Sbjct: 406 KTGVRNLYSVLSYCIEASECRRSVIAEHFNVEWNSSLCSKMCDIC 450
>gi|6692125|gb|AAF24590.1|AC007654_6 T19E23.16 [Arabidopsis thaliana]
Length = 849
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 137/256 (53%), Gaps = 61/256 (23%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF-RNQSGII 81
+ F +++PN+ FY VR K A K +DE+A+ + + N+SGI+
Sbjct: 320 VKFVSSVNRPNL--------------FYSVREKSAVGKLVVDEIAEFIRESYSNNESGIV 365
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGID 123
Y S KECE + +LR RG+ YHA +++N+ ++AFG+GI+
Sbjct: 366 YCFSRKECEQIAGDLRERGISADYYHADMDANMREKVHMRWSKNKLQVIVGTVAFGMGIN 425
Query: 124 KPNVRFVIHHCLSKSMENFYQ-----------ESGRAGRDGQIAHCILYYRLPDVFK--- 169
KP+VRFVIHH LSKSME +YQ ESGRAGRDG + CIL++R DV +
Sbjct: 426 KPDVRFVIHHSLSKSMETYYQVPVSCPLKLDIESGRAGRDGLPSECILFFRSADVPRQLM 485
Query: 170 ------LSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG-----M 218
SSMVF + +GL NLY+IV YC +T+CRR+ +F E D C G M
Sbjct: 486 LSFSPQQSSMVFYEYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQD--CNGILVYRM 543
Query: 219 CDHCRGGRRDAKRVDV 234
CD+C + K VDV
Sbjct: 544 CDNC-ALSSEVKEVDV 558
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/44 (59%), Positives = 34/44 (77%), Gaps = 3/44 (6%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRI 54
W + QV ++AFG+GI+KP+VRFVIHH LSKSME +YQV +
Sbjct: 406 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQVPV 449
>gi|260783443|ref|XP_002586784.1| hypothetical protein BRAFLDRAFT_102942 [Branchiostoma floridae]
gi|229271910|gb|EEN42795.1| hypothetical protein BRAFLDRAFT_102942 [Branchiostoma floridae]
Length = 849
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 108/192 (56%), Gaps = 45/192 (23%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V KP++ ++ +++L ++ RF+ QSGIIY S KE E + +L RG+R YHA
Sbjct: 372 YYEVLRKPSSHENVMEKLVQTINSRFQGQSGIIYVFSRKEAETVAGDLLKRGVRAGCYHA 431
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH LSKSMENFYQESGRA
Sbjct: 432 DLDAAYRSRVHRKWLENTIQVVVATIAFGMGIDKPDVRFVIHHSLSKSMENFYQESGRA- 490
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
+QTG LY +V YC D RCRRAIIA +FDE W
Sbjct: 491 --------------------------EQTGQQKLYGMVKYCHDVNRCRRAIIADHFDEGW 524
Query: 211 SDTECRGMCDHC 222
T+C GMCD C
Sbjct: 525 DSTKCSGMCDVC 536
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/41 (70%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV +IAFG+GIDKP+VRFVIHH LSKSMENFYQ
Sbjct: 445 WLENTIQVVVATIAFGMGIDKPDVRFVIHHSLSKSMENFYQ 485
>gi|307183296|gb|EFN70165.1| Bloom syndrome protein-like protein [Camponotus floridanus]
Length = 1313
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 84/228 (36%), Positives = 127/228 (55%), Gaps = 45/228 (19%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F G ++PN+R+ I ++K K+C DE+ ++ ++RN GI+Y
Sbjct: 820 FMSGFNRPNLRYSI---ITKK-------------GKNCSDEVIAMIMTKYRNTCGIVYCL 863
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
S K+C+D +++ G++ +YHA L N +IAFG+GIDKPN
Sbjct: 864 SRKDCDDYAAQMKKNGIKALSYHAGLTDNQRSNCQGRWIADEIHVICATIAFGMGIDKPN 923
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV-FDQQ------T 179
VRFVIH L KS+E +YQESGRAGRDG+IA CIL+Y D+ ++ M+ D Q T
Sbjct: 924 VRFVIHAALPKSIEGYYQESGRAGRDGEIADCILFYHYADMHRIRKMIELDNQSPQVIGT 983
Query: 180 GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----RGMCDHCR 223
+ NL+ +V++C + T CRR++ +YF E + +C CD+CR
Sbjct: 984 HMDNLFKMVAFCENTTDCRRSLQLNYFGEIFDRQQCISNKTTACDNCR 1031
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFVIH L KS+E +YQ
Sbjct: 912 TIAFGMGIDKPNVRFVIHAALPKSIEGYYQ 941
>gi|296418818|ref|XP_002839022.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635016|emb|CAZ83213.1| unnamed protein product [Tuber melanosporum]
Length = 527
Score = 156 bits (395), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 87/244 (35%), Positives = 131/244 (53%), Gaps = 31/244 (12%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
+ ++ L T+ +V + L +D P + ++ YQV K K+ LD++
Sbjct: 189 VPWIALTATATEKVRMDVQLNLDMPRAKTFTQSFNRPNLN--YQVSPK---TKNVLDDIV 243
Query: 68 DLMSR-RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------- 113
++ R + N++GIIY S + CE E+LR RG+R +HAKL+++
Sbjct: 244 EICRRPEYLNKTGIIYCLSRQNCEQTAEKLRTRGIRAQHFHAKLQADEKIRLQKEWQARR 303
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG + C L+Y PD
Sbjct: 304 FNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGLPSGCFLFYAYPDTS 363
Query: 169 KLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDH 221
L M+ D + + L +V YC ++ CRR + YF E + + ECRG CD+
Sbjct: 364 TLYRMIKDGEGSHDQKRRQMEMLQMVVQYCENKAECRRVQVLRYFGERFPEQECRGGCDN 423
Query: 222 CRGG 225
C G
Sbjct: 424 CASG 427
>gi|241999220|ref|XP_002434253.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215496012|gb|EEC05653.1| ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 556
Score = 156 bits (394), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 93/249 (37%), Positives = 137/249 (55%), Gaps = 38/249 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENF------YQVRIKPAAQ 59
L++ R F V + P VR I H L +++F Y++R+K + +
Sbjct: 174 LSVLREKFSGVPMMALTATATPRVRTDILHQLGMRDPKWFLQSFNRPNLRYEIRLK-SGK 232
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
E+ +++ +F QSGIIY S KEC+DL EEL G+ AYHA L+
Sbjct: 233 VGTAREVLEVVEGKFARQSGIIYCFSRKECDDLAEELSKNGVPAVAYHAGLDDPKRNAVQ 292
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+G+DKP+VRFV+H+ L KSME FYQESGRAGRDG+ A C+L+
Sbjct: 293 QRWIDDKVRVVCATIAFGMGVDKPDVRFVVHYTLPKSMEGFYQESGRAGRDGRPASCLLF 352
Query: 162 YRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV ++ MV +QT L+NL+++V++C ++T CRRA ++ FD + +
Sbjct: 353 YSFADVQRIRRMVEMDKASNYAAKQTHLSNLWHMVNFCENRTDCRRAQVSRNFDRTFCER 412
Query: 214 ECRGMCDHC 222
R CD+C
Sbjct: 413 NRRFACDNC 421
>gi|22651415|gb|AAL05260.1| QDE3-like protein [Blumeria graminis]
Length = 1632
Score = 155 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 87/234 (37%), Positives = 126/234 (53%), Gaps = 42/234 (17%)
Query: 27 LGIDKPNVRFVIHHCLSKSMEN---FYQVRIKPAAQ-KDCLDELADLMSRRFRNQSGIIY 82
LG+ KP + S+S +Y+VR K + + L E+ADL++R++R Q+GIIY
Sbjct: 983 LGMGKPPI-------FSQSFNRPNLYYEVRPKSGRKMPELLKEIADLVTRKYRGQTGIIY 1035
Query: 83 TTSIKECEDLREEL-RNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
T S K CED+ ++L + + V YHA ++S +IAFG+GID
Sbjct: 1036 TLSRKGCEDMAKKLSKEFNISVHYYHAGMKSEEKTKVTRDWQSGKLQVVVATIAFGMGID 1095
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--- 180
KP+VRFVIH+ + KS+E +YQE+GRAGRDG+ + C LYY D L +F+ T
Sbjct: 1096 KPDVRFVIHYTIPKSLEGYYQETGRAGRDGKKSGCYLYYSWGDTVMLRKFIFESDTKNDQ 1155
Query: 181 ---------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
A L ++ YC ++ CRR + YF E +S CR CD+C G
Sbjct: 1156 KSTDQKEREWAMLQTMIGYCDNRADCRRMQVLRYFGETFSKDNCRHSCDNCSSG 1209
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ QV +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 1076 WQSGKLQVVVATIAFGMGIDKPDVRFVIHYTIPKSLEGYYQ 1116
>gi|358339333|dbj|GAA38465.2| bloom syndrome protein homolog [Clonorchis sinensis]
Length = 949
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 98/267 (36%), Positives = 139/267 (52%), Gaps = 43/267 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENFYQ--------VRIKPAAQKD 61
L++ RT+F +V + P VR ++H K+ + F Q ++P K
Sbjct: 364 LSILRTNFPKVPMMAMTATATPRVREDILHQLKMKNTKWFIQSFNRTNLKFEVRPKKLKS 423
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C E+ +++ F +SGI+Y S +EC+ + EEL GL SAYHA +
Sbjct: 424 CTKEIIEVIHSEFPRRSGIVYCLSRRECDLVAEELSRAGLAASAYHAGMTDAQRRRIQEA 483
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VRFVIHH L KS+E +YQE+GR+GRDG A CILYY
Sbjct: 484 WIQEDKCKIVCATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRSGRDGLPATCILYY 543
Query: 163 RLPDVFKLSSMVFDQQTG---LAN-------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
DV +L ++ G AN L+ +VSYC +Q CRR I S+F EA+
Sbjct: 544 HWHDVVRLRKLIQGDTPGSNAFANVQLHEEALFRMVSYCENQIDCRRRQILSHFGEAFDA 603
Query: 213 TEC----RGMCDHC-RGGRRDAKRVDV 234
+C MCD+C + RR ++ DV
Sbjct: 604 ADCGLVVGCMCDNCQQADRRRLEQRDV 630
>gi|302414652|ref|XP_003005158.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
gi|261356227|gb|EEY18655.1| ATP-dependent helicase SGS1 [Verticillium albo-atrum VaMs.102]
Length = 1714
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 111/192 (57%), Gaps = 30/192 (15%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN---- 113
+K ++ +A L+ ++ NQ+GIIY S K ED+ +LR N G+ S YHA ++
Sbjct: 1029 EKGLIETIAQLIQSKYNNQTGIIYVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWN 1088
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAGRDG+ + CI
Sbjct: 1089 VQRRWQKGSIKVVVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCI 1148
Query: 160 LYYRLPDVFKLSSMVFD---------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
LY+ DVF L M+ D +Q G+ N + +YC DQ CRR I YF EA+
Sbjct: 1149 LYFGYGDVFTLKKMINDGDGSEEQKERQRGMLN--RMSTYCDDQKDCRRVTILRYFGEAF 1206
Query: 211 SDTECRGMCDHC 222
+ +C CD+C
Sbjct: 1207 NVADCNKTCDNC 1218
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 1104 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 1133
>gi|328725542|ref|XP_001947924.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 31/212 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
++ P K + E+A+L+ +++NQSGI+Y S KEC++ + N G++ +YHA L
Sbjct: 652 KVVPKKGKSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSD 711
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+IAFG+GIDKP+VR+V H+ L KS+E +YQESGRAGRDG+
Sbjct: 712 PKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGK 771
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYF 206
+HC LYY D+ ++ ++ +G + NL+ IVSYC ++ CRR + +YF
Sbjct: 772 TSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVHMQNLFRIVSYCENKADCRRTLQLNYF 831
Query: 207 DEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
E + D +C CD+C+ + K +DV
Sbjct: 832 GETFDDNKCISNKETACDNCQ-NKSAFKYIDV 862
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V H+ L KS+E +YQ
Sbjct: 732 TIAFGMGIDKPDVRYVFHYSLPKSIEGYYQ 761
>gi|328697674|ref|XP_001952385.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1185
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 120/212 (56%), Gaps = 31/212 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
++ P K + E+A+L+ +++NQSGI+Y S KEC++ + N G++ +YHA L
Sbjct: 652 KVVPKKGKSAMAEIANLIKEKYKNQSGIVYCLSRKECDNTATYMCNEGIKAISYHAGLSD 711
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+IAFG+GIDKP+VR+V H+ L KS+E +YQESGRAGRDG+
Sbjct: 712 PKRNDVQMKWITNKVNLVCATIAFGMGIDKPDVRYVFHYSLPKSIEGYYQESGRAGRDGK 771
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYF 206
+HC LYY D+ ++ ++ +G + NL+ IVSYC ++ CRR + +YF
Sbjct: 772 TSHCFLYYSYQDMHRIRKLIELDDSGNHESKKVHMQNLFRIVSYCENKADCRRTLQLNYF 831
Query: 207 DEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
E + D +C CD+C+ + K +DV
Sbjct: 832 GETFDDNKCISNKETACDNCQ-NKSAFKYIDV 862
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V H+ L KS+E +YQ
Sbjct: 732 TIAFGMGIDKPDVRYVFHYSLPKSIEGYYQ 761
>gi|342865489|gb|EGU71814.1| hypothetical protein FOXB_17670 [Fusarium oxysporum Fo5176]
Length = 1563
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 80/201 (39%), Positives = 116/201 (57%), Gaps = 26/201 (12%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K K C+DE+A L+ ++ NQSGI+YT S K E + E L +G+ YHA
Sbjct: 1011 YEVRGKTTNAK-CMDEIASLIMSKYANQSGIVYTVSRKNAEKVAESLSIQGITARHYHAG 1069
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L+ +IAFG+GIDKP+VRFVIHH L K++E +YQE+GRAGR
Sbjct: 1070 LDPQEKVEVQTSWQQGQVKIVVATIAFGMGIDKPDVRFVIHHGLPKTLEGYYQETGRAGR 1129
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + CIL+Y D+ L ++ D ++ ++ L + ++C +++ CRR I
Sbjct: 1130 DGDPSDCILFYGKQDIRILKKLIADGEGNNEQKERQMSMLNRVTAFCDNKSDCRRVEILR 1189
Query: 205 YFDEAWSDTECRGMCDHCRGG 225
YF E +S +CR CD+CR G
Sbjct: 1190 YFGEDFSAAQCRKTCDNCRAG 1210
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L K++E +YQ
Sbjct: 1092 ATIAFGMGIDKPDVRFVIHHGLPKTLEGYYQ 1122
>gi|346979414|gb|EGY22866.1| ATP-dependent helicase SGS1 [Verticillium dahliae VdLs.17]
Length = 1518
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 80/192 (41%), Positives = 111/192 (57%), Gaps = 30/192 (15%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN---- 113
+K ++ +A L+ ++ NQ+GIIY S K ED+ +LR N G+ S YHA ++
Sbjct: 834 EKGLIETIAQLIQSKYDNQTGIIYVLSRKNTEDVATKLRDNYGISASHYHAAMKPEEKWN 893
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAGRDG+ + CI
Sbjct: 894 VQRRWQKGSIKVVVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGRDGKPSDCI 953
Query: 160 LYYRLPDVFKLSSMVFD---------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
LY+ DVF L M+ D +Q G+ N + +YC DQ CRR I YF EA+
Sbjct: 954 LYFGYGDVFTLKKMINDGDGSEEQKERQRGMLN--RMSTYCDDQKDCRRVTILRYFGEAF 1011
Query: 211 SDTECRGMCDHC 222
+ +C CD+C
Sbjct: 1012 NVADCNKTCDNC 1023
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 909 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 938
>gi|350417151|ref|XP_003491281.1| PREDICTED: Bloom syndrome protein homolog [Bombus impatiens]
Length = 1344
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 88/251 (35%), Positives = 132/251 (52%), Gaps = 38/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFY---------QVRIKPAAQKD 61
LN R ++ +V + P VR I H L S+ ++ + I K+
Sbjct: 787 LNRLRENYPKVPVIALTATATPRVRTDILHQLGLSVPKWFMSSFNRPNLRYSIIAKKGKN 846
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +++N+ GI+Y S K+C+D ++R G++ +YHA +
Sbjct: 847 CSDEVIAMLKMKYKNECGIVYCLSRKDCDDYAMQMRKNGIKALSYHAGHTDSSRTDIQGR 906
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y
Sbjct: 907 WISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENADCILFYN 966
Query: 164 LPDVFKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D+ ++ M+ D +T + NLY +VS+C ++T CRRA YF E + +C
Sbjct: 967 YADMHRIRKMIELDNPNPTVTKTHIDNLYKMVSFCENKTDCRRAQQLHYFGEMFDRQQCI 1026
Query: 217 G----MCDHCR 223
CD+CR
Sbjct: 1027 ANKATSCDNCR 1037
>gi|302890734|ref|XP_003044250.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
gi|256725172|gb|EEU38537.1| hypothetical protein NECHADRAFT_64925 [Nectria haematococca mpVI
77-13-4]
Length = 1302
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K +D +A L+ ++RNQSGI+YT S K E + E L +G+ YHA
Sbjct: 906 YYEVRPKTTNNK-TIDSIASLIRLQYRNQSGIVYTISRKNAEKVAESLTKQGIMARHYHA 964
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ ++AFG+GIDKP+VRFV+HH L KS+E +YQE+GRAG
Sbjct: 965 HVDPREKVEVQDGWQRGQVKVVVATVAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAG 1024
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CIL+Y D+ L ++ D ++ ++ L + ++C +++ CRRA I
Sbjct: 1025 RDGNPSDCILFYGKGDIRVLKKLIADGEGSEEQKERQMSMLNRVTTFCDNRSDCRRAEIL 1084
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E ++ +CR CD+C+ G
Sbjct: 1085 RYFGEEFTAGQCRKTCDNCKAG 1106
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV+HH L KS+E +YQ
Sbjct: 989 TVAFGMGIDKPDVRFVMHHGLPKSLEGYYQ 1018
>gi|391342341|ref|XP_003745479.1| PREDICTED: putative ATP-dependent DNA helicase Q1-like [Metaseiulus
occidentalis]
Length = 611
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 84/217 (38%), Positives = 123/217 (56%), Gaps = 41/217 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ + + D + +L+ + QSGIIY SI+E
Sbjct: 280 DRPNLRYSVKN-----------------DTDDITAAIGNLIRNEYAGQSGIIYCFSIREA 322
Query: 90 EDL-REELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFV 130
E + R + + G+ AYHA LE+ +IAFG+GIDK +VRFV
Sbjct: 323 EQVARCLVSDFGISADAYHANLEAERRSRVHRKWSTGSIQVVVATIAFGMGIDKGDVRFV 382
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSY 190
IH+ + KS+EN+YQESGRAGRDG+ A CI++++ D+F+ SSMV ++ G+ NLYN+V+Y
Sbjct: 383 IHYSIPKSLENYYQESGRAGRDGEPADCIVFFKFQDIFRQSSMVLSEKAGVRNLYNVVNY 442
Query: 191 CLDQTRCRRAIIASYF--DEAWSDTEC---RGMCDHC 222
CLD CRR ++A YF ++S T C CD+C
Sbjct: 443 CLDTIHCRRLLLAKYFCDGTSFSGTSCGQTEQRCDNC 479
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T QV +IAFG+GIDK +VRFVIH+ + KS+EN+YQ
Sbjct: 356 WSTGSIQVVVATIAFGMGIDKGDVRFVIHYSIPKSLENYYQ 396
>gi|67469885|ref|XP_650914.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56467579|gb|EAL45525.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
Length = 1182
Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 112/202 (55%), Gaps = 33/202 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y VR K K +DE+ +++ R+++ QSGIIY S K D+ +EL RG++ YHA
Sbjct: 661 YCVRPK---TKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAG 717
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+++ +IAFG+GIDKP+VRFVIHH L KS+E +YQESGRAGR
Sbjct: 718 MDTKERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGR 777
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLDQTRCRRA 200
DG+ A CILYY D + F++ QT NL ++SYC + CRR
Sbjct: 778 DGEPADCILYYNYRDKYTYERF-FEKDKENNGDLSHIQTARNNLNEVISYCENTVDCRRT 836
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
++ YF E ++ C CD+C
Sbjct: 837 LVLQYFGEVFNSKLCNRTCDNC 858
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 741 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 770
>gi|449704341|gb|EMD44603.1| ATP-dependent helicase SGS1, putative [Entamoeba histolytica KU27]
Length = 1170
Score = 154 bits (388), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 112/202 (55%), Gaps = 33/202 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y VR K K +DE+ +++ R+++ QSGIIY S K D+ +EL RG++ YHA
Sbjct: 649 YCVRPK---TKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAG 705
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+++ +IAFG+GIDKP+VRFVIHH L KS+E +YQESGRAGR
Sbjct: 706 MDTKERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGR 765
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLDQTRCRRA 200
DG+ A CILYY D + F++ QT NL ++SYC + CRR
Sbjct: 766 DGEPADCILYYNYRDKYTYERF-FEKDKENNGDLSHIQTARNNLNEVISYCENTVDCRRT 824
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
++ YF E ++ C CD+C
Sbjct: 825 LVLQYFGEVFNSKLCNRTCDNC 846
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 729 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 758
>gi|302883319|ref|XP_003040560.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
gi|256721447|gb|EEU34847.1| hypothetical protein NECHADRAFT_88354 [Nectria haematococca mpVI
77-13-4]
Length = 838
Score = 154 bits (388), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 118/202 (58%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K C+DE+A L+ ++ NQSGI+YT S K E + E L ++G+ YHA
Sbjct: 281 YYEVRGKTTNAK-CMDEIASLIKSKYANQSGIVYTVSRKNAEKVAESLSDQGITARHYHA 339
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 340 GVDPQEKAEVQIAWQQGQIKIIVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAG 399
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CIL+Y D+ L ++ + ++ ++ L + ++C +++ CRRA I
Sbjct: 400 RDGDPSDCILFYGKQDIRILKKLIAEGDGNKEQKERQMSMLNRVTAFCDNKSDCRRAEIL 459
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E +S +C CD+C+ G
Sbjct: 460 RYFGEDFSAAQCGKTCDNCKAG 481
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 363 ATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQ 393
>gi|407042405|gb|EKE41307.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 1173
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 112/202 (55%), Gaps = 33/202 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y VR K K +DE+ +++ R+++ QSGIIY S K D+ +EL RG++ YHA
Sbjct: 652 YCVRPK---TKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDIAQELNKRGIKSKYYHAG 708
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+++ +IAFG+GIDKP+VRFVIHH L KS+E +YQESGRAGR
Sbjct: 709 MDTKERTTVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGR 768
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLDQTRCRRA 200
DG+ A CILYY D + F++ QT NL ++SYC + CRR
Sbjct: 769 DGEPADCILYYNYRDKYTYERF-FEKDKENNGDLSHIQTARNNLNEVISYCENTVDCRRT 827
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
++ YF E ++ C CD+C
Sbjct: 828 LVLQYFGEVFNSKLCNRTCDNC 849
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 732 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 761
>gi|342879842|gb|EGU81076.1| hypothetical protein FOXB_08424 [Fusarium oxysporum Fo5176]
Length = 1668
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 116/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +K +D ++ L+ R+ NQSGI+YT S K E + E L G+ YHA
Sbjct: 1029 YYEVRPKTTNEK-VMDAISSLIHSRYANQSGIVYTISRKNAEKVAESLSGNGITARFYHA 1087
Query: 109 ------KLESN------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K+E +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 1088 GCDPQEKVEVQNSWQRGHVKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAG 1147
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CIL+Y D+ L ++ D ++ ++ L + ++C +++ CRR I
Sbjct: 1148 RDGNPSDCILFYGKADIRVLKKLIADGDGSHDQKERQMSMLNRVTAFCDNKSDCRRTEIL 1207
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E +S +CR CD+C+ G
Sbjct: 1208 RYFGEDFSAAQCRKSCDNCKAG 1229
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W+ +V +IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 1099 NSWQRGHVKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQ 1141
>gi|302926382|ref|XP_003054285.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
gi|256735226|gb|EEU48572.1| hypothetical protein NECHADRAFT_30968 [Nectria haematococca mpVI
77-13-4]
Length = 1678
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 84/231 (36%), Positives = 126/231 (54%), Gaps = 32/231 (13%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMEN-FYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
V I LG+D C S + N +Y+VR K K ++ +A L+ ++ NQSG
Sbjct: 1013 VDIRHNLGMDNCQT-----FCQSFNRPNLYYEVRPKTTNDK-TIEAIASLVQSKYPNQSG 1066
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
I+YT S K E + E L G+ S YHA ++ +IAFG+G
Sbjct: 1067 IVYTISRKNAEKVAESLSQHGIAASHYHAHVDPQEKVEVQNAWQRGEIKIVVATIAFGMG 1126
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD----- 176
IDKP+VRFV+HH L KS+E +YQE+GRAGRDG+ + CIL+Y D+ L ++ D
Sbjct: 1127 IDKPDVRFVMHHGLPKSLEGYYQETGRAGRDGKPSDCILFYGKQDIRVLKRLIADGDGSH 1186
Query: 177 --QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
++ +A L + ++C +++ CRRA I YF E ++ +C CD+C+ G
Sbjct: 1187 EQKERQMAMLNRVTAFCDNKSDCRRAEILRYFGEEFTGAQCNKTCDNCKAG 1237
>gi|167386794|ref|XP_001737905.1| ATP-dependent helicase SGS1 [Entamoeba dispar SAW760]
gi|165899114|gb|EDR25795.1| ATP-dependent helicase SGS1, putative [Entamoeba dispar SAW760]
Length = 1162
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 80/202 (39%), Positives = 112/202 (55%), Gaps = 33/202 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y VR K K +DE+ +++ R+++ QSGIIY S K D+ +EL RG++ YHA
Sbjct: 644 YCVRPK---TKGVIDEIEEMIKRKYKGQSGIIYCLSQKNTMDVAQELNKRGIKSKYYHAG 700
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+++ +IAFG+GIDKP+VRFVIHH L KS+E +YQESGRAGR
Sbjct: 701 MDTKERTKVQKEWCDGEFNVICATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQESGRAGR 760
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLDQTRCRRA 200
DG+ A CILYY D + F++ QT NL ++SYC + CRR
Sbjct: 761 DGEPADCILYYNYRDKYTYERF-FEKDKENNGDLSHIQTARNNLNEVISYCENTVDCRRT 819
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
++ YF E ++ C CD+C
Sbjct: 820 LVLQYFGEIFNSKLCNKTCDNC 841
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 724 TIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 753
>gi|407187902|gb|AFT63914.1| RecQ helicase, partial [Heliconius erato petiverana x Heliconius
erato favorinus]
Length = 166
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 68/142 (47%), Positives = 98/142 (69%), Gaps = 2/142 (1%)
Query: 95 ELRNRGLRVSAYHAKLESNV--SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
E ++R +HAK + ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAGRD
Sbjct: 2 EAKSRSDVHMKWHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRD 61
Query: 153 GQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
GQ A C+ YR+ D+FK+SSMVF + +LY++V YCL+ + CRR ++A +FDE W B
Sbjct: 62 GQRAECVTLYRMQDIFKVSSMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDWGB 121
Query: 213 TECRGMCDHCRGGRRDAKRVDV 234
+C MCD C + +++
Sbjct: 122 XDCNKMCDVCANSNTTTREINL 143
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 13 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 53
>gi|383859981|ref|XP_003705470.1| PREDICTED: Bloom syndrome protein homolog [Megachile rotundata]
Length = 1362
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/262 (34%), Positives = 139/262 (53%), Gaps = 39/262 (14%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKD 61
L + R ++ +V + P VR I H L + M +F + ++ K+
Sbjct: 788 LKMLRENYTKVGMIALTATATPRVRTDILHQLGLTRPKWFMSSFNRPNLRYSIITKKGKN 847
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +++N GI+Y S KEC+D ++R G++ YHA L N
Sbjct: 848 CSDEVIAMIKTKYKNDCGIVYCLSRKECDDYAVQMRKNGIKALGYHAGLTDNNRSNIQGR 907
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y
Sbjct: 908 WISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENADCILFYN 967
Query: 164 LPDVFKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC- 215
D+ ++ M+ D +T + NL+ +VS+C ++T CRR++ +YF E + +C
Sbjct: 968 YADMHRIRKMIEMDNSNPDAIKTNIDNLFKMVSFCENKTDCRRSLQLNYFGEIFDRQQCI 1027
Query: 216 ---RGMCDHCRGGRRDAKRVDV 234
CD+CR + D K +D
Sbjct: 1028 SNKATSCDNCR-NKDDFKMLDA 1048
>gi|443726019|gb|ELU13361.1| hypothetical protein CAPTEDRAFT_91032 [Capitella teleta]
Length = 579
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 91/244 (37%), Positives = 133/244 (54%), Gaps = 33/244 (13%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKD 61
LN R F V + P VR I H L + M++F +V +K P K
Sbjct: 160 LNGLRERFPGVPMIAVTATATPRVRKDILHQLGMNSPKWFMQSFNRVNLKYEVLPKKPKS 219
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL----ESNV--- 114
++ +++ RF NQSGI+Y S +EC+ + +L G++ AYHA L S+V
Sbjct: 220 LTSDVINMIHSRFSNQSGIVYCLSRRECDTVSTDLTKAGIQAKAYHAGLTDAQRSSVQQK 279
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VRFV+H+ L KS+E +YQESGRAGRDG +A C+L+Y
Sbjct: 280 WLNEDGCKVVCATIAFGMGIDKPDVRFVVHYSLPKSIEGYYQESGRAGRDGILATCVLFY 339
Query: 163 RLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----RGM 218
DV +L M+ + + L NL+ +++YC ++ CRR+ SYF E C R +
Sbjct: 340 SYSDVSRLRRMI-ESEVHLDNLFRMINYCENKADCRRSQQMSYFGEILDRRHCAQMPRAV 398
Query: 219 CDHC 222
CD+C
Sbjct: 399 CDNC 402
>gi|428184545|gb|EKX53400.1| hypothetical protein GUITHDRAFT_64555, partial [Guillardia theta
CCMP2712]
Length = 513
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/236 (37%), Positives = 125/236 (52%), Gaps = 38/236 (16%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
S+ F +++PN+ Y+V KP A KD L + ++ + F +SGI+
Sbjct: 190 SVVFRGSVNRPNL--------------VYRVEEKPYASKDVLTMILSVIKQNFSGKSGIV 235
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S ++ ED+ + L GLR YHA L +IAFG+GI+
Sbjct: 236 YCLSRRDAEDVAKFLAENGLRALPYHADLSDEYRTRVHQQWTKGIVHIMVATIAFGMGIN 295
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN 183
KP+VRFVIHH +SKS+ +YQESGR GRDG A CILYYR D+ +LS+M F + GL
Sbjct: 296 KPDVRFVIHHSMSKSLAAYYQESGRGGRDGDRAVCILYYRPGDLTRLSTMSFHDRNGLKG 355
Query: 184 LYNIVSYCLDQTRCRRAIIASYF-DEAWSDTECRGMCDHC----RGGRRDAKRVDV 234
+Y IV YC + + CRR II S+F D+A C + C R G+ + D+
Sbjct: 356 IYEIVRYC-EASSCRRQIILSHFGDQAAGLERCPSGAEECDCCSRQGQGSQQATDI 410
>gi|332023927|gb|EGI64145.1| Bloom syndrome protein-like protein [Acromyrmex echinatior]
Length = 1254
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 89/253 (35%), Positives = 134/253 (52%), Gaps = 40/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKD 61
L R ++ +V P VR I H L + M +F + ++ K+
Sbjct: 676 LKCLRNNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLRYSIISKKGKN 735
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +F+N GI+Y S K+CED ++ G++V +YHA L
Sbjct: 736 CSDEIVAMIMTKFKNTCGIVYCLSRKDCEDYAAHMKKNGIKVLSYHAGLSDTQRSNCQGK 795
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E++YQESGRAGRDG+IA CIL+Y
Sbjct: 796 WISDEVHVICATIAFGMGIDKPNVRFVIHAALPKSIESYYQESGRAGRDGEIADCILFYH 855
Query: 164 LPDVFKLSSMVFDQ--------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+ ++ M F+Q T + NL+ +V++C ++T CRR++ +YF E + +C
Sbjct: 856 YADMHRIRKM-FEQDNPNPQVISTHMDNLFKMVAFCENRTDCRRSLQLNYFGEIFDRQQC 914
Query: 216 ----RGMCDHCRG 224
CD+CR
Sbjct: 915 ISNKIATCDNCRS 927
>gi|328707887|ref|XP_001947908.2| PREDICTED: Bloom syndrome protein homolog [Acyrthosiphon pisum]
Length = 1128
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 30/198 (15%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL----- 110
P K L E+A L+ +F QSGIIY + KEC++ + G++ +YHA L
Sbjct: 599 PKKGKSSLLEIAKLIKSKFARQSGIIYCMTKKECDNTAIFMSGEGIKAVSYHAGLTDKKR 658
Query: 111 ----------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+SNV +IAFG+GIDKP+VR+VIH+ L +S+E FYQESGRAGRDG +A+
Sbjct: 659 NDVQMQWTSNKSNVVCATIAFGMGIDKPDVRYVIHYSLPQSIEGFYQESGRAGRDGDVAY 718
Query: 158 CILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
C++YY D+ ++ ++ ++ NL IVSYC ++ CRRA+ +YFDE
Sbjct: 719 CLIYYNYSDMHRIKKLIEIGGGATYETKKVRFHNLCRIVSYCENKMDCRRAMQLNYFDEQ 778
Query: 210 WSDTEC----RGMCDHCR 223
+ +C + CD+CR
Sbjct: 779 FDKAQCIANEKTTCDNCR 796
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ L +S+E FYQ
Sbjct: 676 TIAFGMGIDKPDVRYVIHYSLPQSIEGFYQ 705
>gi|429855219|gb|ELA30187.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
gloeosporioides Nara gc5]
Length = 1695
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 86/232 (37%), Positives = 125/232 (53%), Gaps = 35/232 (15%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENF-YQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
V I LG+D V C S + N Y+VR K +++ + ++ADL+ ++ Q G
Sbjct: 980 VDIKHNLGMDNCEV-----FCQSFNRPNLTYEVRRK---ERELVHKIADLIQSKYDQQCG 1031
Query: 80 IIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGL 120
IIYT S K E + E+LR++ G+ YHA++ +IAFG+
Sbjct: 1032 IIYTLSRKTSEQVAEKLRDKYGILAHHYHAQMSPEDRIDVQRQWQKDRIHVVVATIAFGM 1091
Query: 121 GIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---- 176
GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG + CILY+ DV L M+ D
Sbjct: 1092 GIDKPDVRFVIHHSVPKSLEGYYQETGRAGRDGNPSDCILYFGYQDVVTLRKMIADGDGN 1151
Query: 177 ---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
++ L + ++C ++ CRR I YF E ++ EC CD+CR G
Sbjct: 1152 EDQKERQRTMLNRVTAFCDNRENCRRVEILRYFGEVFNGDECNKTCDNCRAG 1203
>gi|380011350|ref|XP_003689771.1| PREDICTED: Bloom syndrome protein homolog [Apis florea]
Length = 1167
Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 38/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFY---------QVRIKPAAQKD 61
LN R ++ +V + P VR I H L + ++ + I K+
Sbjct: 632 LNCLRENYPKVPVIVLTATATPRVRSDILHQLRITTPKWFMSSFNRPNLRYSIIAKKSKN 691
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +++N GI+Y S K+C+D +R ++ +YHA L N
Sbjct: 692 CSDEVIAMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNSIKALSYHAGLTDNNRSDIQGR 751
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y
Sbjct: 752 WISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENADCILFYN 811
Query: 164 LPDVFKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D+ ++ M+ D +T + NL+ +VS+C ++T CRR +YF E + +C
Sbjct: 812 YTDMHRIRKMIELDNSNPTIIKTHIDNLFKMVSFCENKTDCRRTQQLNYFGEIFDREQCI 871
Query: 217 G----MCDHCR 223
CD+CR
Sbjct: 872 ANKVTSCDNCR 882
>gi|322699139|gb|EFY90903.1| QDE3 protein [Metarhizium acridum CQMa 102]
Length = 1698
Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 72/202 (35%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + + + +A L++ ++RN +GI+YT S K+ E++ +L G+ YHA
Sbjct: 1039 YYEVRTK-TSNSNATESIASLINAKYRNITGIVYTISRKQAEEVARKLAGHGIAARHYHA 1097
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKPNVRFV+HH L KS+E +YQE+GRAG
Sbjct: 1098 AIDPQEKVEVQTSWQKGDIKVVVATIAFGMGIDKPNVRFVMHHGLPKSLEGYYQETGRAG 1157
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL+Y D+ L ++ D ++ + L + ++C +++ CRR +
Sbjct: 1158 RDGKPSDCILFYGKADIRVLKKLITDGDGNNEQKERQMVMLNRVTAFCDNKSDCRRTEVL 1217
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E + ++CR CD+CR G
Sbjct: 1218 RYFGEDFVPSQCRKSCDNCRAG 1239
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 1122 TIAFGMGIDKPNVRFVMHHGLPKSLEGYYQ 1151
>gi|255725388|ref|XP_002547623.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
gi|240135514|gb|EER35068.1| hypothetical protein CTRG_01930 [Candida tropicalis MYA-3404]
Length = 1227
Score = 150 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 79/200 (39%), Positives = 115/200 (57%), Gaps = 29/200 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R+K Q+D L E+ D + + NQ+GIIY S + CE +L GLR S YHA
Sbjct: 821 FYEIRLK---QRDFLKEIKDYIMEKHPNQTGIIYCHSKQSCEQTSAKLNEYGLRTSFYHA 877
Query: 109 --------KLESN----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K+++N +IAFG+GIDKP+VRFVIH L +S+E +YQE+GRAG
Sbjct: 878 GMSTEDRYKIQTNWQNNKIQVICATIAFGMGIDKPDVRFVIHLFLPRSLEGYYQETGRAG 937
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-FDQQTG-------LANLYNIVSYCLDQTRCRRAII 202
RDG+ + CI+YY D L +++ D+Q L L +V YC + CRR +
Sbjct: 938 RDGKHSECIMYYSPKDARTLRTLIQGDEQFSEDVKEGHLEKLRQVVQYCENTIDCRRQQV 997
Query: 203 ASYFDEAWSDTECRGMCDHC 222
YF+E+++ +C CD+C
Sbjct: 998 LQYFNESFNPADCNKECDNC 1017
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV +IAFG+GIDKP+VRFVIH L +S+E +YQ
Sbjct: 891 WQNNKIQVICATIAFGMGIDKPDVRFVIHLFLPRSLEGYYQ 931
>gi|327291741|ref|XP_003230579.1| PREDICTED: ATP-dependent DNA helicase Q1-like, partial [Anolis
carolinensis]
Length = 451
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 110/190 (57%), Gaps = 32/190 (16%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I F ++PN+ +Y+VR K ++ ++++ L++RR++ SG
Sbjct: 272 QKCITFTASFNRPNL--------------YYEVRQKSPVAQNFIEDIVKLINRRYKGLSG 317
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S K+ E + L+ G++ YHA +E ++AFG+G
Sbjct: 318 IIYCFSQKDAEQVTMSLQQLGIKAGTYHANMEPKDKSRVHKRWSANEIQIVVATVAFGMG 377
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
IDKP+VRFVIHH +SKSMEN+YQESGRAGRD Q A CILYY D+F++S+MV + G
Sbjct: 378 IDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCILYYGFGDIFRISTMVVMENVGQ 437
Query: 182 ANLYNIVSYC 191
LY++VSYC
Sbjct: 438 QKLYDMVSYC 447
>gi|410075411|ref|XP_003955288.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
gi|372461870|emb|CCF56153.1| hypothetical protein KAFR_0A07190 [Kazachstania africana CBS 2517]
Length = 1318
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 139/253 (54%), Gaps = 36/253 (14%)
Query: 1 MFALLY-TIAYLNLWRTSFYQV--SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPA 57
MF + Y TI + L T+ QV I LG+ N F+ ++ +Y+V+ K
Sbjct: 704 MFKVEYPTIPMMALTATASKQVIMDIIHNLGLK--NEVFLKQSFNRTNL--YYEVKKK-- 757
Query: 58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---- 113
KD ++ + D++ RFRNQ+GIIY S CE + +L+ + +R + YHA +E
Sbjct: 758 -DKDTMNNICDMIKNRFRNQTGIIYCHSKNSCEQVSSQLQRKNIRCAYYHAGMEPEERSA 816
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
++AFG+GIDKP+VRFVIH+ + +++E +YQE+GRAGRDG ++C+
Sbjct: 817 VQKAWQEDEIQVICATVAFGMGIDKPDVRFVIHYTVPRTLEGYYQETGRAGRDGNYSYCV 876
Query: 160 LYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
Y+ D+ + +M+ ++Q L L +++YC + T CRR ++ SYF+E ++
Sbjct: 877 TYFHFKDIRTMQTMIQKDQNLDRENKQKHLNKLQEVMAYCDNITDCRRKLVLSYFNEDFN 936
Query: 212 DTECRGMCDHCRG 224
C CD+C+
Sbjct: 937 PALCAKNCDNCKN 949
>gi|403173011|ref|XP_003332116.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170091|gb|EFP87697.2| hypothetical protein PGTG_13483 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1231
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 31/205 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--YH 107
Y+VR K KD L+++ +++ + +SGIIY S K+CE++ L + R++A YH
Sbjct: 668 YEVRPK---TKDVLNDIIQIITVDHKGESGIIYCLSKKQCEEVAAHLSAKN-RITAHHYH 723
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + + +IAFG+GIDKP+VRFVIHH + S+E +YQE+GRA
Sbjct: 724 AGMSKDDRQKIQHGWQVGKLQVICATIAFGMGIDKPDVRFVIHHSMPSSLEGYYQETGRA 783
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQT-------GLANLYNIVSYCLDQTRCRRAII 202
GRDGQI+ CIL+Y D MV T AN +V +CL++ CRRA I
Sbjct: 784 GRDGQISECILFYAYRDFTAFMRMVEKSTTVKEQIERQQANAKQVVGFCLNKLDCRRAQI 843
Query: 203 ASYFDEAWSDTECRGMCDHCRGGRR 227
SYF E +S +ECR CD C R
Sbjct: 844 LSYFGEKFSASECRKTCDTCMNPER 868
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV +IAFG+GIDKP+VRFVIHH + S+E +YQ
Sbjct: 738 WQVGKLQVICATIAFGMGIDKPDVRFVIHHSMPSSLEGYYQ 778
>gi|367004206|ref|XP_003686836.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
gi|357525138|emb|CCE64402.1| hypothetical protein TPHA_0H01970 [Tetrapisispora phaffii CBS 4417]
Length = 1355
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 117/205 (57%), Gaps = 28/205 (13%)
Query: 48 NFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
N Y IK + K+ + E++D + RRFRNQ+GIIY S CE ++ G++ + YH
Sbjct: 796 NLYYEIIKKS--KNTIFEMSDDIKRRFRNQTGIIYCHSKNSCEQTSAQMERAGIKCAYYH 853
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRA
Sbjct: 854 AGMEPDDRLKVQKAWQADEVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRA 913
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRDG+ ++CI YY DV + +M+ +++ L L +++YC + T CRR +
Sbjct: 914 GRDGKFSYCITYYSFKDVRTIQTMIQKDENLDRENKEKHLNKLQQVMAYCDNVTDCRRKL 973
Query: 202 IASYFDEAWSDTECRGMCDHCRGGR 226
+ SYF+E + C+ CD+CR +
Sbjct: 974 VLSYFNEQFDSKLCKKNCDNCRNSK 998
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 868 WQADEVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 908
>gi|295151611|gb|ADF81973.1| RecQ helicase [Heliconius erato favorinus x Heliconius erato emma]
Length = 154
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 66/131 (50%), Positives = 93/131 (70%), Gaps = 2/131 (1%)
Query: 106 YHAKLESNV--SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+HAK + ++AFG+GIDKP+VRFVIHH +SKS+EN+YQESGRAGRDGQ A C+ YR
Sbjct: 5 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQESGRAGRDGQRAECVTLYR 64
Query: 164 LPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ D+FK+S MVF + +LY++V YCL+ + CRR ++A +FDE W D +C MCD C
Sbjct: 65 MQDIFKVSXMVFSSVGSMDHLYDMVKYCLNGSFCRRLLLAKHFDEDWGDYDCNKMCDVCA 124
Query: 224 GGRRDAKRVDV 234
+ +++
Sbjct: 125 NSNTTTREINL 135
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W YQ ++AFG+GIDKP+VRFVIHH +SKS+EN+YQ
Sbjct: 5 WHAKEYQAIVATVAFGMGIDKPDVRFVIHHTISKSIENYYQ 45
>gi|402086461|gb|EJT81359.1| RecQ helicase MUSN [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1754
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 77/203 (37%), Positives = 113/203 (55%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
FY +R K K+ + +ADL+ ++GI+YT S K E + ++LR++ G+ YH
Sbjct: 1049 FYDIRTK---GKNIVQTIADLIQSDHEGETGIVYTLSRKSAETIAKKLRDQSGISAHHYH 1105
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
AK+E+ +IAFG+GIDKP+VRFV+HH L KS+E +YQE+GRA
Sbjct: 1106 AKMETEEKTDVQRKWQSGQIKVVVATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRA 1165
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYN-IVSYCLDQTRCRRAII 202
GRDG +HC LY+ D+ L M+ D Q+ + + N ++ +C D+ CRR I
Sbjct: 1166 GRDGGQSHCYLYFGYGDITSLRKMINDGEGNQEQRDRQSQMLNRVIDFCEDKRECRRQSI 1225
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
YF E + C CD+CR G
Sbjct: 1226 LRYFGEKFDPASCNKTCDNCRNG 1248
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 52/108 (48%), Gaps = 19/108 (17%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKP---AAQKDCLDEL- 66
W++ +V +IAFG+GIDKP+VRFV+HH L KS+E +YQ + Q C
Sbjct: 1120 WQSGQIKVVVATIAFGMGIDKPDVRFVVHHTLPKSLEGYYQETGRAGRDGGQSHCYLYFG 1179
Query: 67 -ADLMSRRF-----------RNQSGIIYTTSIKECEDLREELRNRGLR 102
D+ S R R++ + I CED RE R LR
Sbjct: 1180 YGDITSLRKMINDGEGNQEQRDRQSQMLNRVIDFCEDKRECRRQSILR 1227
>gi|301116896|ref|XP_002906176.1| ATP-dependent helicase, RECQ family protein [Phytophthora infestans
T30-4]
gi|262107525|gb|EEY65577.1| ATP-dependent helicase, RECQ family protein [Phytophthora infestans
T30-4]
Length = 513
Score = 149 bits (377), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 122/202 (60%), Gaps = 17/202 (8%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+V+ KPA +D L L+ + +GI+Y + KE E + + L +R + YHA
Sbjct: 180 YEVKEKPAKDAAAMDCLVRLVKSFSSSDTGIVYCLTRKETEQVAQHLHQANIRAACYHAH 239
Query: 110 LESN----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+E +IAFGLGI+KP+VRFVIH LSKS+E +YQESGRAGRDG
Sbjct: 240 VEKKEEIHMAWIRNKLQVVVATIAFGLGINKPDVRFVIHFTLSKSIEGYYQESGRAGRDG 299
Query: 154 QIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW-SD 212
+ A C+L Y+ DV ++ ++V + G+ ++ +++ YC++ ++CR++ +A+YF EA+ SD
Sbjct: 300 KPARCVLMYKPSDVPRVCNIVQAEVGGILSMRSMIKYCVELSQCRQSTMAAYFGEAFESD 359
Query: 213 TECRGMCDHCRGGRRDAKRVDV 234
C G CD+C+ R+D+
Sbjct: 360 AICGGGCDNCKRDIDTEDRIDL 381
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFGLGI+KP+VRFVIH LSKS+E +YQ
Sbjct: 261 TIAFGLGINKPDVRFVIHFTLSKSIEGYYQ 290
>gi|323455269|gb|EGB11138.1| hypothetical protein AURANDRAFT_52627 [Aureococcus anophagefferens]
Length = 616
Score = 149 bits (377), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 114/209 (54%), Gaps = 23/209 (11%)
Query: 27 LGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSI 86
LG+ + VRF S F++VR KPAA+ D + LA + R +G++Y S
Sbjct: 259 LGLGRRTVRF---RGKSDRPNLFFEVRRKPAAKDDAVAALAAFVDEVGRTATGVVYCLSQ 315
Query: 87 KECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVR 128
KECED+ LR RGLR + YHA L +IAFGLGIDKP+VR
Sbjct: 316 KECEDVSSGLRTRGLRAAPYHAGLPDESRSRVHDAWRRGSVAVVCATIAFGLGIDKPDVR 375
Query: 129 FVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIV 188
+V H SK++E++YQE+GRAGRDG A C L+YR D++++ S+ + +G AN +
Sbjct: 376 YVAHFTCSKALESYYQEAGRAGRDGAPARCCLFYRAADLWRIFSLTATEASGAANGMAMA 435
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRG 217
YC + CRR +A +A D RG
Sbjct: 436 CYCSSRGACRRKALAHALGDA--DPPARG 462
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 30/43 (69%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ WR V +IAFGLGIDKP+VR+V H SK++E++YQ
Sbjct: 349 DAWRRGSVAVVCATIAFGLGIDKPDVRYVAHFTCSKALESYYQ 391
>gi|396484512|ref|XP_003841962.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
gi|312218537|emb|CBX98483.1| hypothetical protein LEMA_P098920.1 [Leptosphaeria maculans JN3]
Length = 1753
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 109/189 (57%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K ++ +A+L+ R+ +SGIIY S K CED+ ++L + GL+ YHA +ES
Sbjct: 1050 KGVVNSIAELIKDRYSKKSGIIYCLSRKSCEDVAKKLSDLGLKAFHYHAGMESAERSAVQ 1109
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+VIHH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 1110 RKWQSNEYHVIVATIAFGMGIDKADVRYVIHHTLPKSLEGYYQETGRAGRDGKRSECYLY 1169
Query: 162 YRLPDVFKLSSMV------FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y+ D M+ F+Q+ L + L ++ YC ++ CRRA + YF E + +
Sbjct: 1170 YQYTDCRTYRKMIDEGEGSFEQKQRLHSMLRTVIQYCENKADCRRAQVLGYFSEPFDPAK 1229
Query: 215 CRGMCDHCR 223
C CD+CR
Sbjct: 1230 CNSTCDNCR 1238
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+++ Y V +IAFG+GIDK +VR+VIHH L KS+E +YQ
Sbjct: 1112 WQSNEYHVIVATIAFGMGIDKADVRYVIHHTLPKSLEGYYQ 1152
>gi|290991859|ref|XP_002678552.1| predicted protein [Naegleria gruberi]
gi|284092165|gb|EFC45808.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 149 bits (375), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 77/195 (39%), Positives = 115/195 (58%), Gaps = 22/195 (11%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +K E+++ +++++ NQSGIIY S K+CE + EEL G V Y++
Sbjct: 221 YYEVRKKQTLEKTA-KEISEFINKKYPNQSGIIYCLSKKDCEKMAEELTTLGHDVGVYNS 279
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GI+KP+VRFVIHH L KS+E++YQESGRAG
Sbjct: 280 DIKAADKQEVHEKWSRDELKIIVATIAFGMGINKPDVRFVIHHSLPKSIEDYYQESGRAG 339
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQT---GLANLYNIVSYCLDQTRCRRAIIASYFD 207
RDG +HCIL+Y D + + ++ T G N+ IVSYC + CRR + +F
Sbjct: 340 RDGLPSHCILFYSYADKARQQKFLENENTNKSGYENINKIVSYCENDCECRRVVQLRHFG 399
Query: 208 EAWSDTECRGMCDHC 222
E++ C MCD+C
Sbjct: 400 ESFDPKVCSKMCDNC 414
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFVIHH L KS+E++YQ
Sbjct: 304 TIAFGMGINKPDVRFVIHHSLPKSIEDYYQ 333
>gi|50292717|ref|XP_448791.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528104|emb|CAG61761.1| unnamed protein product [Candida glabrata]
Length = 1371
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ + E+ D + ++FRNQ+GIIY S CE ++++ G++ + YHA
Sbjct: 825 YYEVRKK---TKNTIFEICDTIKQQFRNQTGIIYCHSKNSCEQTAQQMQRNGIKCAYYHA 881
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E++ ++AFG+GIDK +VRFV H + +++E +YQE+GRAG
Sbjct: 882 GMEADERLQVQREWQNDNLQVICATVAFGMGIDKADVRFVFHFTVPRTLEGYYQETGRAG 941
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI YY DV + +M+ ++Q L L + +YC + T CRR ++
Sbjct: 942 RDGNYSYCITYYSFRDVRTMQTMIQKDKNLDGINKQKHLDKLQQVTAYCENDTDCRRKLV 1001
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF E + C CD+CR
Sbjct: 1002 LSYFSEEFDPINCNKNCDNCR 1022
Score = 43.5 bits (101), Expect = 0.076, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDK +VRFV H + +++E +YQ
Sbjct: 895 WQNDNLQVICATVAFGMGIDKADVRFVFHFTVPRTLEGYYQ 935
>gi|328778036|ref|XP_396209.4| PREDICTED: Bloom syndrome protein homolog, partial [Apis mellifera]
Length = 1179
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 86/251 (34%), Positives = 129/251 (51%), Gaps = 38/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFY---------QVRIKPAAQKD 61
LN R ++ +V + P VR I H L + ++ + I K+
Sbjct: 761 LNCLRENYPKVPVIVLTATATPRVRSDILHQLRITTPKWFMSSFNRPNLRYSIIAKKGKN 820
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +++N GI+Y S K+C+D +R ++ +YHA L N
Sbjct: 821 CSDEVIGMIKTKYKNDCGIVYCLSRKDCDDYAMHMRKNSIKALSYHAGLTDNNRSDIQGR 880
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y
Sbjct: 881 WISEEIKVVCATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGENADCILFYN 940
Query: 164 LPDVFKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D+ ++ M+ D +T + NL+ +VS+C ++T CRR +YF E + +C
Sbjct: 941 YTDMHRIRKMIELDNSNPTIIKTHIDNLFKMVSFCENKTDCRRTQQLNYFGEIFDREQCI 1000
Query: 217 G----MCDHCR 223
CD+CR
Sbjct: 1001 ANKVTSCDNCR 1011
>gi|451855559|gb|EMD68851.1| hypothetical protein COCSADRAFT_178603 [Cochliobolus sativus ND90Pr]
Length = 1787
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 110/189 (58%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K ++ +ADL+ R+ +SGIIY S K CE + ++L G+R YHA ++S
Sbjct: 1075 KGIINNIADLIKERYVGKSGIIYCLSRKSCEQVAQKLSEMGIRAYHYHAGMDSADRSDVQ 1134
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+VIHH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 1135 RKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLY 1194
Query: 162 YRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y+ D L M+ +Q+ L++ L ++ YC ++ CRRA + YF EA+ ++
Sbjct: 1195 YQYADSRILRKMIDEGEGSREQKQRLSDMLRTVIQYCENKADCRRAQVLGYFSEAFDASK 1254
Query: 215 CRGMCDHCR 223
C CD+CR
Sbjct: 1255 CNSTCDNCR 1263
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Y V +IAFG+GIDK +VR+VIHH L KS+E +YQ
Sbjct: 1137 WQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQ 1177
>gi|365990115|ref|XP_003671887.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
gi|343770661|emb|CCD26644.1| hypothetical protein NDAI_0I00750 [Naumovozyma dairenensis CBS 421]
Length = 1434
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 117/201 (58%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ + E+AD++ +FRNQ+GIIY S CE +++ G++ + YHA
Sbjct: 866 YYEVRKK---NKNTIFEIADMIKSKFRNQTGIIYCHSKNSCEQTSNQMQRAGIKSAYYHA 922
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 923 GMEPDDRLKIQKAWQADEIQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAG 982
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ ++CI Y+ DV + +M+ +++ L L +++YC + T CRR ++
Sbjct: 983 RDGKYSYCITYFCFRDVRTMQTMIQKDENLDRENKEKHLNKLQQVMAYCDNATDCRRKLV 1042
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E + C CD+C+
Sbjct: 1043 LSYFNEDFDSKLCHKNCDNCK 1063
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 936 WQADEIQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQ 976
>gi|366993190|ref|XP_003676360.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
gi|342302226|emb|CCC69999.1| hypothetical protein NCAS_0D04180 [Naumovozyma castellii CBS 4309]
Length = 1344
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 117/201 (58%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V+ K K+ + E+ D + +FRNQ+GIIY S CE ++L+ +G++ + YHA
Sbjct: 784 YYEVKKK---TKNAIFEIIDSIKTKFRNQTGIIYCHSKNSCEQTSDKLQRQGIKCAFYHA 840
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 841 GMEPDDRLKVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 900
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-----FDQQTG---LANLYNIVSYCLDQTRCRRAII 202
RDG+ ++CI Y+ DV + +M+ D+Q L L ++SYC + T CRR ++
Sbjct: 901 RDGKFSYCITYFSFRDVRTMQTMIQKDENLDRQNKEKHLNKLQQVMSYCDNMTDCRRKLV 960
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E + C CD+C+
Sbjct: 961 LSYFNEDFDSKLCHKNCDNCK 981
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 854 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 894
>gi|408399479|gb|EKJ78580.1| hypothetical protein FPSE_01246 [Fusarium pseudograminearum CS3096]
Length = 1673
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +K ++ +A L+ + N+SGI+YT S K E + E L + G+ YHA
Sbjct: 1035 YYEVRPKSTGEK-TIESIASLIQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHA 1093
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 1094 GCDPQEKVDVQNAWQRGQVKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAG 1153
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CIL+Y D+ L ++ D ++ ++ L + ++C +++ CRR I
Sbjct: 1154 RDGNPSDCILFYGKADIRVLKKLIADGDGSHEQKERQMSMLNRVTAFCDNKSDCRRTEIL 1213
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E +S EC CD+C+ G
Sbjct: 1214 RYFGEDFSPAECHKSCDNCKAG 1235
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W+ +V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1105 NAWQRGQVKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQ 1147
>gi|46107336|ref|XP_380727.1| hypothetical protein FG00551.1 [Gibberella zeae PH-1]
Length = 1672
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 113/202 (55%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +K ++ +A L+ + N+SGI+YT S K E + E L + G+ YHA
Sbjct: 1034 YYEVRPKSTGEK-TIESIASLIQSNYANKSGIVYTISRKSAEKVAESLSDSGITARHYHA 1092
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 1093 GCDPQEKVDVQNAWQRGQVKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQETGRAG 1152
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CIL+Y D+ L ++ D ++ ++ L + ++C +++ CRR I
Sbjct: 1153 RDGNPSDCILFYGKADIRVLKKLIADGDGSHEQKERQMSMLNRVTAFCDNKSDCRRTEIL 1212
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E +S EC CD+C+ G
Sbjct: 1213 RYFGEDFSPAECHKSCDNCKAG 1234
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W+ +V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1104 NAWQRGQVKVVVATIAFGMGIDKPDVRFVIHHGIPKSLEGYYQ 1146
>gi|384252651|gb|EIE26127.1| ATP-dependent DNA helicase [Coccomyxa subellipsoidea C-169]
Length = 517
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 119/217 (54%), Gaps = 35/217 (16%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFR-NQSGIIYT 83
F +D+PN+ ++ VR KPA +D ++ + +R GI+Y
Sbjct: 197 FRSSVDRPNL--------------YWTVRQKPAKAEDVTADMIAWIRGNYRLTDCGIVYC 242
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKP 125
+ KE E L ELR +G+R + YHA + + V ++AFG+GI+KP
Sbjct: 243 QTRKESESLAAELRQQGMRAACYHADMAAGVREAVHSQWSAGEVQICVATVAFGMGINKP 302
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLY 185
+VRFVIHH LSKS+EN+YQE+GRAGRDG+ A C+LYYR D K ++MV + L
Sbjct: 303 DVRFVIHHSLSKSVENYYQEAGRAGRDGERAVCMLYYRFADALKQAAMVSFEPGWEQRLG 362
Query: 186 NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
I+ Y + CRR++I+ +F EA +C MCD C
Sbjct: 363 AIMRYAAASSTCRRSLISRHFGEA--PAKCHAMCDCC 397
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Q+ ++AFG+GI+KP+VRFVIHH LSKS+EN+YQ
Sbjct: 281 WSAGEVQICVATVAFGMGINKPDVRFVIHHSLSKSVENYYQ 321
>gi|366995175|ref|XP_003677351.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
gi|342303220|emb|CCC70998.1| hypothetical protein NCAS_0G01110 [Naumovozyma castellii CBS 4309]
Length = 989
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 79/204 (38%), Positives = 116/204 (56%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K KDC+ E+AD + +F QSGIIY S CE + L+++ +R YHA
Sbjct: 548 FYEVRKK---TKDCMVEIADAIKFQFTGQSGIIYCHSKNSCEQVSAYLQSKQIRSGFYHA 604
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++N ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 605 GMDANERLMIQQDWQANKLQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 664
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF-DQQTGLAN-------LYNIVSYCLDQTRCRRAII 202
RDG+ ++CI YY DV + M+ D+ AN L ++SYC + CRR ++
Sbjct: 665 RDGKPSYCITYYSFKDVRTIQKMIQRDKDLDRANKEKHFDKLQQVMSYCDNIHECRRKLV 724
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
SYF+EA+ C CD+CR R
Sbjct: 725 LSYFNEAFDPVACDKNCDNCRNNR 748
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 618 WQANKLQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 658
>gi|345495259|ref|XP_001605753.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1426
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 133/256 (51%), Gaps = 39/256 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVR----IKPAAQKD 61
L L R ++ +V P VR I H L + M +F + + K+
Sbjct: 825 LQLLRKNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLHYVVTSKKGKN 884
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
+E+ +++ R FRN GI+Y S K+C+ + +++ G++ +YHA L +
Sbjct: 885 STEEIIEMIKRDFRNDCGIVYCLSRKDCDSFADTMKSNGIKALSYHAGLSDHQRLEIQGR 944
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y
Sbjct: 945 WISEQIKVVCATIAFGMGIDKPNVRFVIHATLPKSIEGYYQESGRAGRDGENAECILFYH 1004
Query: 164 LPDVFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+ + M+ Q+T + NL+ IV++C ++T CRR + +YF E + + C
Sbjct: 1005 YGDMMRHRKMIEGDSTSNWEAQKTHMDNLFKIVAFCENKTDCRRGLQLNYFGEMFDRSIC 1064
Query: 216 ----RGMCDHCRGGRR 227
+ CD+CR R
Sbjct: 1065 IARKQTTCDNCRNQGR 1080
>gi|358398791|gb|EHK48142.1| hypothetical protein TRIATDRAFT_262699 [Trichoderma atroviride IMI
206040]
Length = 1621
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 116/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + ++A L++ ++RN +GI+YT S K+ ED+ E+L N G+ YHA
Sbjct: 958 YYEVRPK-GSNPVVTQQIASLINSKYRNVTGIVYTISRKQAEDVAEKLSNNGIAARHYHA 1016
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFV+HH + KS+E +YQE+GRAG
Sbjct: 1017 QITPAEKVEVQQAWQKGQIKVVVATIAFGMGIDKPDVRFVMHHGIPKSLEGYYQETGRAG 1076
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL+Y D+ L ++ D ++ + L + ++C ++ CRR +
Sbjct: 1077 RDGKPSDCILFYGKADIRVLKRLIIDGEGSKDQKERQMVMLNRVTAFCDNKADCRRTEVL 1136
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E + ++C CD+C+ G
Sbjct: 1137 RYFGEDFHPSQCHKTCDNCQAG 1158
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+HH + KS+E +YQ
Sbjct: 1041 TIAFGMGIDKPDVRFVMHHGIPKSLEGYYQ 1070
>gi|156848959|ref|XP_001647360.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
gi|156118046|gb|EDO19502.1| hypothetical protein Kpol_1018p31 [Vanderwaltozyma polyspora DSM
70294]
Length = 1332
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 70/201 (34%), Positives = 112/201 (55%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++RIK K+ + E+ + + RFRNQ+GIIY S CE + G++ + YHA
Sbjct: 756 FYEIRIK---NKNSIFEMCNDIKTRFRNQTGIIYCHSKNSCEQTASLIERSGVKCTYYHA 812
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 813 GMEPEDRMKVQQAWQEDKIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 872
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ Q L L ++SYC + CRR ++
Sbjct: 873 RDGNYSYCITYFSFKDIRSIQTMIQKDQNLDRENKEKHLNKLKQVISYCDNIADCRRKLV 932
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E + + +C+ CD+C+
Sbjct: 933 LSYFNEKFDEAKCQKNCDNCK 953
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 826 WQEDKIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 866
>gi|307195272|gb|EFN77228.1| Bloom syndrome protein-like protein [Harpegnathos saltator]
Length = 1091
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 87/251 (34%), Positives = 132/251 (52%), Gaps = 38/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKD 61
L R ++ +V P VR I H L + M +F + ++ K+
Sbjct: 556 LKCLRKNYPKVPTMALTATATPRVRTDILHQLDMTKPKWFMSSFNRPNLRYSIISKKGKN 615
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
C DE+ ++ +F+N GI+Y S K+CED L+ ++ +YHA L N
Sbjct: 616 CSDEVVAMIKTKFKNVCGIVYCLSRKDCEDYAAHLKKNCIKALSYHAGLTDNQRNNCQGK 675
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVR+VIH L KS+E +YQESGRAGRDG+IA CIL+Y
Sbjct: 676 WILDEIHVICATIAFGMGIDKPNVRYVIHAALPKSIEGYYQESGRAGRDGEIADCILFYN 735
Query: 164 LPDVFKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D+ ++ M+ D +T + NL+ +V++C + T CRR++ +YF E ++ +C
Sbjct: 736 YADMHRIRKMIEMDNSNPQVIRTHMDNLFKMVAFCENTTDCRRSLQLNYFGEVFNREQCA 795
Query: 217 G----MCDHCR 223
CD+CR
Sbjct: 796 SSKITACDNCR 806
>gi|444313787|ref|XP_004177551.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
gi|387510590|emb|CCH58032.1| hypothetical protein TBLA_0A02320 [Tetrapisispora blattae CBS 6284]
Length = 1416
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 68/201 (33%), Positives = 115/201 (57%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + +++D + RF+NQ+GI+Y S CE L G++ + YHA
Sbjct: 931 YYEVTKK---TKNSIFQMSDEIKSRFKNQTGIVYCHSKNSCEQTSALLEKSGIKAAFYHA 987
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 988 GMEPDDRLRVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 1047
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ +HCI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 1048 RDGKFSHCITYFSFRDIRSIQTMIERDKNLDKSNKEKHLNKLQQVLAYCDNITDCRRKLV 1107
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E ++ +C CD+CR
Sbjct: 1108 LSYFNENFNSKDCHKNCDNCR 1128
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 1001 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 1041
>gi|326479495|gb|EGE03505.1| RecQ family helicase MusN [Trichophyton equinum CBS 127.97]
Length = 1531
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 39/230 (16%)
Query: 32 PNVRF-VIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRFRNQSGI 80
PNV+ VIH+ K E F Y+VR K AQ D L ++ADL++ + ++ GI
Sbjct: 848 PNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQ-DALKDIADLITNDYPDKCGI 906
Query: 81 IYTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLG 121
IY S K CE + +L ++ G++ + YHA L S +IAFG+G
Sbjct: 907 IYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMG 966
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------- 174
IDK NVRFVIHH + +S+E +YQE+GRAGRDG+ + C LYY D + M+
Sbjct: 967 IDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETT 1026
Query: 175 FDQ-QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
++Q Q L ++ +C + T CRRA I +YFDE + +C CD+C+
Sbjct: 1027 YEQKQRQRQMLRHVTQFCENITDCRRAQILAYFDEKFKREDCNRTCDNCK 1076
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ + V +IAFG+GIDK NVRFVIHH + +S+E +YQ
Sbjct: 949 WQSGKHNVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQ 989
>gi|326471382|gb|EGD95391.1| ATP-dependent DNA helicase [Trichophyton tonsurans CBS 112818]
Length = 1556
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 87/230 (37%), Positives = 126/230 (54%), Gaps = 39/230 (16%)
Query: 32 PNVRF-VIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRFRNQSGI 80
PNV+ VIH+ K E F Y+VR K AQ D L ++ADL++ + ++ GI
Sbjct: 879 PNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQ-DALKDIADLITNDYPDKCGI 937
Query: 81 IYTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLG 121
IY S K CE + +L ++ G++ + YHA L S +IAFG+G
Sbjct: 938 IYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTVQRDWQSGKHNVIVATIAFGMG 997
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------- 174
IDK NVRFVIHH + +S+E +YQE+GRAGRDG+ + C LYY D + M+
Sbjct: 998 IDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYLYYAYYDSTSIGYMIKKNKETT 1057
Query: 175 FDQ-QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
++Q Q L ++ +C + T CRRA I +YFDE + +C CD+C+
Sbjct: 1058 YEQKQRQRQMLRHVTQFCENITDCRRAQILAYFDEKFKREDCNRTCDNCK 1107
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ + V +IAFG+GIDK NVRFVIHH + +S+E +YQ
Sbjct: 980 WQSGKHNVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQ 1020
>gi|440298813|gb|ELP91444.1| DNA helicase hus2, putative [Entamoeba invadens IP1]
Length = 1361
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 30/198 (15%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
+KP K+ +D++ L+ ++RNQSGI+Y S K +D+ ++L RG++ YHA+L
Sbjct: 835 VKPKT-KNVIDDIEKLIKTKYRNQSGIVYCLSRKNTKDVCDQLVARGIKACFYHAELTPE 893
Query: 114 ------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
+IAFG+GI+KP+VRFVIHH L K++E +YQESGRAGRDG+
Sbjct: 894 ERQKAQRGWSDGEFDVICATIAFGMGINKPDVRFVIHHSLPKTLEGYYQESGRAGRDGEP 953
Query: 156 AHCILYYRLPDVFKLSSMVFDQQT-----------GLANLYNIVSYCLDQTRCRRAIIAS 204
A CIL+Y D F + + Q NL ++SYC + CRR ++
Sbjct: 954 ADCILFYSYRDKFVYERFLMEDQKKNNSDSEHIELSRDNLNQVISYCENTVDCRRTMVLR 1013
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + C CD+C
Sbjct: 1014 YFGENFDPKWCNKTCDNC 1031
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFVIHH L K++E +YQ
Sbjct: 913 TIAFGMGINKPDVRFVIHHSLPKTLEGYYQ 942
>gi|6934278|gb|AAF31695.1|AF205407_1 QDE3 protein [Neurospora crassa]
Length = 1955
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYH 107
+Y+VR+K +++ + +A+L+ ++ Q+GIIYT S K E++ + L+ + ++ YH
Sbjct: 1107 YYEVRMK---EQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1163
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + ++ +IAFG+GIDKP+VRFVIH + KS+E +YQE+GRA
Sbjct: 1164 ASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1223
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ D ++ L L +VSYC Q CRR +
Sbjct: 1224 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQLQMLNRVVSYCESQHTCRREEV 1283
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
YF E + +CR CD+CR GR
Sbjct: 1284 LRYFGEEFDYRKCRDGCDNCRNGR 1307
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T +V +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1178 WQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQ 1218
>gi|350295161|gb|EGZ76138.1| hypothetical protein NEUTE2DRAFT_97732 [Neurospora tetrasperma FGSC
2509]
Length = 1994
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYH 107
+Y+VR+K +++ + +A+L+ ++ Q+GIIYT S K E++ + L+ + ++ YH
Sbjct: 1141 YYEVRMK---EQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1197
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + ++ +IAFG+GIDKP+VRFVIH + KS+E +YQE+GRA
Sbjct: 1198 ASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1257
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ D ++ L L +VSYC Q CRR +
Sbjct: 1258 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQLQMLNRVVSYCESQHTCRREEV 1317
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
YF E + +CR CD+CR GR
Sbjct: 1318 LRYFGEEFDYRKCRDGCDNCRNGR 1341
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T +V +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1212 WQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQ 1252
>gi|336465540|gb|EGO53780.1| hypothetical protein NEUTE1DRAFT_93386 [Neurospora tetrasperma FGSC
2508]
Length = 2005
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYH 107
+Y+VR+K +++ + +A+L+ ++ Q+GIIYT S K E++ + L+ + ++ YH
Sbjct: 1152 YYEVRMK---EQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1208
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + ++ +IAFG+GIDKP+VRFVIH + KS+E +YQE+GRA
Sbjct: 1209 ASITTDEKISVQHEWQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1268
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ D ++ L L +VSYC Q CRR +
Sbjct: 1269 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQLQMLNRVVSYCESQHTCRREEV 1328
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
YF E + +CR CD+CR GR
Sbjct: 1329 LRYFGEEFDYRKCRDGCDNCRNGR 1352
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T +V +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1223 WQTGQVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQ 1263
>gi|195054415|ref|XP_001994120.1| GH17364 [Drosophila grimshawi]
gi|193895990|gb|EDV94856.1| GH17364 [Drosophila grimshawi]
Length = 1404
Score = 146 bits (369), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 131/263 (49%), Gaps = 40/263 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVR------FVIHHC---LSKSMENFYQVRIKPAAQKD 61
L + R F V P VR + HC LS + + ++ P
Sbjct: 790 LGILRKRFPNVPTMALTATATPRVRQDILQQLNLTHCKWFLSSFNRSNLRFQVLPKKGAS 849
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------- 114
LDE+ + R SGIIY S KEC+++ ++ G+R AYHA L
Sbjct: 850 TLDEMRSFIQTRPITASGIIYCLSRKECDEVAHKMSAAGIRAVAYHAGLTDTARESRQKD 909
Query: 115 -----------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG+IA CILYY
Sbjct: 910 WITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYN 969
Query: 164 LPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+ +L M+ ++ + NL+ IV YC + T CRRA YF E ++ +C
Sbjct: 970 YSDMMRLKKMMDADRALEYHVKKIHIDNLHRIVGYCENITDCRRAQQLDYFGEHFTSEQC 1029
Query: 216 ----RGMCDHCRGGRRDAKRVDV 234
R CD+C +R K++DV
Sbjct: 1030 LENRRTACDNCL-KKRSYKQIDV 1051
>gi|164423365|ref|XP_964030.2| hypothetical protein NCU08598 [Neurospora crassa OR74A]
gi|157070060|gb|EAA34794.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1955
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 117/204 (57%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYH 107
+Y+VR+K +++ + +A+L+ ++ Q+GIIYT S K E++ + L+ + ++ YH
Sbjct: 1107 YYEVRMK---EQNLIARIAELIKEKYDGQTGIIYTLSRKSAENIAKNLQEKHRIKAKHYH 1163
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + ++ +IAFG+GIDKP+VRFVIH + KS+E +YQE+GRA
Sbjct: 1164 ASITTDEKISVQHEWQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1223
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ D ++ L L +VSYC Q CRR +
Sbjct: 1224 GRDGKPSDCYLYFAYGDIQSLRRMIADGEGDYAQKERQLQMLNRVVSYCESQHTCRREEV 1283
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
YF E + +CR CD+CR GR
Sbjct: 1284 LRYFGEEFDYRKCRDGCDNCRNGR 1307
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T +V +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1178 WQTGRVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQ 1218
>gi|355336772|gb|AER57871.1| ATP-dependent DNA helicase RecQ family protein [Acytostelium
subglobosum]
Length = 1147
Score = 146 bits (368), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/229 (35%), Positives = 121/229 (52%), Gaps = 46/229 (20%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
I F ++PN+++ + + KS K +D++A+ +++ + +SGI+
Sbjct: 673 PITFKQSFNRPNLQYAV---VKKS--------------KKIVDDIAEFINKFYPGKSGIV 715
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S +C + ELR +GLR + YHA +E + +IAFG+GI+
Sbjct: 716 YCISRNDCVTVASELRKKGLRANFYHANMEPDERQRTQESWTRDRIKIIVSTIAFGMGIN 775
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--- 180
KP+VRFVIHH L KS+E +YQESGRAGRDG ++HCILYY D F+ ++ TG
Sbjct: 776 KPDVRFVIHHSLPKSLEGYYQESGRAGRDGNLSHCILYYSFGDKFR-QEVLIKNSTGSTH 834
Query: 181 ------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRGMCDHC 222
+ NL IV YC + CRR + Y E D E C+ CD+C
Sbjct: 835 ASIRENMENLNRIVGYCENPVDCRRKLQLQYLGEDSFDKEMCKKTCDNC 883
>gi|254567515|ref|XP_002490868.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|238030664|emb|CAY68588.1| ATP-dependent helicase [Komagataella pastoris GS115]
gi|328351249|emb|CCA37649.1| bloom syndrome protein [Komagataella pastoris CBS 7435]
Length = 1302
Score = 146 bits (368), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 80/234 (34%), Positives = 125/234 (53%), Gaps = 39/234 (16%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMEN---FYQVRIKPAAQKDCLDELADLMSRRFRNQ 77
+ I LG++KP C +S FY+V++K K LDE+ ++++ ++RNQ
Sbjct: 717 MDIVHNLGLNKP-------QCFKQSFNRTNLFYKVQVK---TKTHLDEITNMINGQYRNQ 766
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFG 119
+GIIY S CE L G++ S YHA + + +IAFG
Sbjct: 767 TGIIYCHSKNSCEQTSARLIQNGIKCSFYHAGMTTEDRFAVQSAWQSDKIRVICATIAFG 826
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV----- 174
+GIDKP+VRFVIH + +++E +YQE+GRAGRDG + CI++Y DV L +M+
Sbjct: 827 MGIDKPDVRFVIHLTVPRTLEGYYQETGRAGRDGNHSDCIMFYSYRDVRTLQTMIQKDVD 886
Query: 175 ---FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
+++ L L ++ YC + T CRR + YF+E + +C+ CD+C G
Sbjct: 887 LTRENKENHLNKLRKVIQYCENGTDCRRQQVLQYFNENFDKKDCQKQCDNCVKG 940
>gi|452005005|gb|EMD97461.1| hypothetical protein COCHEDRAFT_1220872 [Cochliobolus heterostrophus
C5]
Length = 1794
Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 73/189 (38%), Positives = 109/189 (57%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K ++ +A+L+ R+ +SGIIY S K CE + ++L + G+R YHA ++S
Sbjct: 1075 KGIINSIAELIKERYVGKSGIIYCLSRKSCEQVAQKLSDMGIRAYHYHAGMDSADRSEVQ 1134
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+VIHH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 1135 RKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLY 1194
Query: 162 YRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y D L M+ +Q+ L++ L ++ YC ++ CRRA + YF EA+ +
Sbjct: 1195 YLYADSRILRKMIDEGEGSREQKQRLSDMLRTVIQYCENKADCRRAQVLGYFSEAFDPAK 1254
Query: 215 CRGMCDHCR 223
C CD+CR
Sbjct: 1255 CNSTCDNCR 1263
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Y V +IAFG+GIDK +VR+VIHH L KS+E +YQ
Sbjct: 1137 WQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQ 1177
>gi|363748979|ref|XP_003644707.1| hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
gi|356888340|gb|AET37890.1| Hypothetical protein Ecym_2138 [Eremothecium cymbalariae DBVPG#7215]
Length = 1394
Score = 145 bits (367), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 116/203 (57%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+YQV K K+ +DE+ + + +FR Q+GI+Y S CE + G++ + YHA
Sbjct: 828 YYQVLRK---SKNSMDEICETIKTKFRGQTGIVYCHSKNSCEQTAATMVRSGVKCAYYHA 884
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 885 GMDPDERLQVQQGWQSNKVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 944
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG +HCI+YY DV + SM+ +++ L L ++ YC + T CRR ++
Sbjct: 945 RDGSYSHCIMYYSFRDVRTIQSMIQKDKNLDRENKEKHLNKLQQVMQYCENTTDCRRQLV 1004
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E+++ ++C CD+CR G
Sbjct: 1005 LSYFNESFNSSDCTKNCDNCRNG 1027
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+++ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 898 WQSNKVQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 938
>gi|330932861|ref|XP_003303943.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
gi|311319743|gb|EFQ87962.1| hypothetical protein PTT_16345 [Pyrenophora teres f. teres 0-1]
Length = 1750
Score = 145 bits (367), Expect = 9e-33, Method: Composition-based stats.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K ++ +ADL+ ++ +SGIIY S K CE + ++L G+R YHA ++S
Sbjct: 1059 KGVINSIADLIKEKYTGKSGIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSEVQ 1118
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+VIHH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 1119 RKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLY 1178
Query: 162 YRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y D L M+ +Q+ L + L +V YC ++ CRRA + YF EA+ ++
Sbjct: 1179 YMYGDSRILRKMIDEGEGSREQKQRLNDMLRTVVQYCENKADCRRAQVLGYFSEAFDASK 1238
Query: 215 CRGMCDHCR 223
C CD+CR
Sbjct: 1239 CNNTCDNCR 1247
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Y V +IAFG+GIDK +VR+VIHH L KS+E +YQ
Sbjct: 1121 WQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQ 1161
>gi|322708811|gb|EFZ00388.1| QDE3 protein [Metarhizium anisopliae ARSEF 23]
Length = 1697
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 70/202 (34%), Positives = 116/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + + + +A L++ ++ N +GI+YT S K+ E++ + L G+ YHA
Sbjct: 1039 YYEVRTK-KSHANATESIASLINAKYHNTTGIVYTLSRKQAEEVAQTLAGYGIAARHYHA 1097
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFV+HH L KS+E +YQE+GRAG
Sbjct: 1098 AIDPQAKVDVQRSWQKGDIKVVVATIAFGMGIDKPDVRFVMHHGLPKSLEGYYQETGRAG 1157
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL+Y D+ L M+ D ++ + L + ++C +++ CRR +
Sbjct: 1158 RDGKPSDCILFYGKADIRVLKKMIADGDGNNAQKERQMVMLNRVTAFCDNKSDCRRTEVL 1217
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E + ++C+ CD+CR G
Sbjct: 1218 RYFGEDFVPSQCQKSCDNCRAG 1239
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+HH L KS+E +YQ
Sbjct: 1122 TIAFGMGIDKPDVRFVMHHGLPKSLEGYYQ 1151
>gi|171687593|ref|XP_001908737.1| hypothetical protein [Podospora anserina S mat+]
gi|170943758|emb|CAP69410.1| unnamed protein product [Podospora anserina S mat+]
Length = 1692
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 84/218 (38%), Positives = 116/218 (53%), Gaps = 36/218 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y+V KP +D L L++ R++NQ+GIIYTTS CE + +L + G++ + YH
Sbjct: 1030 YYEVFPKPPTY---VDPLGSLIATRYKNQTGIIYTTSRASCEGIAGKLVEKYGIKAAPYH 1086
Query: 108 AKLESN----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
A L+ +IAFG+GIDKP+VRFVIH L K+ME +YQE+GRAGR
Sbjct: 1087 AGLDDRPEIQRKWQDDEIHVIVATIAFGMGIDKPDVRFVIHVSLPKTMEGYYQETGRAGR 1146
Query: 152 DGQIAHCILYYRLPDVFKLSSMV---------------FDQQTGLANLYNIVSYCLDQTR 196
DG+ A CILY+ DV L MV ++ L L + YCL+ T
Sbjct: 1147 DGKPADCILYFSYGDVTSLRRMVQKDELDKDGKHVRSQAEKDKQLELLDRMTFYCLNTTS 1206
Query: 197 CRRAIIASYFDEAWSDTECRGMCDHCRGGRR-DAKRVD 233
CRR + YF E ++ C CD C G + K+VD
Sbjct: 1207 CRRTQLLGYFGEDFNAANCNKQCDFCLLGEKVTLKQVD 1244
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L K+ME +YQ
Sbjct: 1110 TIAFGMGIDKPDVRFVIHVSLPKTMEGYYQ 1139
>gi|291237646|ref|XP_002738744.1| PREDICTED: Bloom syndrome protein-like [Saccoglossus kowalevskii]
Length = 1050
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 94/251 (37%), Positives = 127/251 (50%), Gaps = 39/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKS----MENFYQVRIK----PAAQKD 61
LN R F V I P VR ++ +S +++F + +K P
Sbjct: 613 LNKLRELFPTVPIMALTATATPRVRADIVKQLKIRSPIWFIQSFNRSNLKYSIYPKKPSK 672
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
+ +L+ RF +SGIIY S ECE + EL + G+ AYHA LESN
Sbjct: 673 VTQDCINLIQARFAGESGIIYCLSRNECEKVAAELSSAGISAKAYHAGLESNSRTYTQQA 732
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFVIHH L KS+E FYQESGRAGRDG IAHCIL+Y
Sbjct: 733 WVRDEYKVVCATIAFGMGIDKPDVRFVIHHSLPKSIEGFYQESGRAGRDGNIAHCILFYS 792
Query: 164 LPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTEC 215
D+ +L ++ + + NL +V YC ++T CRR+ + Y E S C
Sbjct: 793 YQDMTRLRKVMERENDNFEAIRVHIENLQRMVQYCENETDCRRSQLLEYLGEKVISYDLC 852
Query: 216 RGM----CDHC 222
G+ CD+C
Sbjct: 853 SGIVSTACDNC 863
>gi|388581963|gb|EIM22269.1| ATP-dependent DNA helicase [Wallemia sebi CBS 633.66]
Length = 1115
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 118/203 (58%), Gaps = 28/203 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
FY+ IKP K ++ +L++ +FR Q+GIIY +S + CED+ +LR+ GL YH
Sbjct: 573 FYE--IKPKNGKTVYADIQNLINNKFRGQTGIIYCSSKRACEDVASKLRHEYGLPAQHYH 630
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L + ++AFG+GIDKP+VRFVIH + +S+E +YQE+GRA
Sbjct: 631 AGLSRDDRTKIQINWQKNRFLIICATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQETGRA 690
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ ++CILY+ D ++ ++ + + T +NL +V +CL++T CRR +
Sbjct: 691 GRDGEHSNCILYFAYKDTITINYLIDNGEGTHEQKATQRSNLRQVVQFCLNKTDCRRTQV 750
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
+YF E + +C CD+C G
Sbjct: 751 LNYFGEHFDPRKCHKTCDNCFAG 773
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH + +S+E +YQ
Sbjct: 655 ATVAFGMGIDKPDVRFVIHFSMPQSLEGYYQ 685
>gi|407917347|gb|EKG10661.1| Helicase [Macrophomina phaseolina MS6]
Length = 1739
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 27/200 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y+VR K ++D L ++AD++ ++R QSGI+Y S K+CE + ++LR + + YH
Sbjct: 1068 YYEVRTK-GKREDTLQKIADIIKTQYRGQSGIVYCLSRKKCEVIAQQLREKHNISAHHYH 1126
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +ES +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRA
Sbjct: 1127 AGMESAEKSETQKSWQAGGYKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRA 1186
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAII 202
GRDG+ + C L+Y D L M+ + ++ A L N+V +C ++ CRR +
Sbjct: 1187 GRDGKRSGCYLFYGYQDTTILKKMIKEGEGSRQQKERQYAMLRNVVQFCENKADCRRVQV 1246
Query: 203 ASYFDEAWSDTECRGMCDHC 222
+YF+E++ +C CD+C
Sbjct: 1247 LAYFNESFRAEDCDAECDNC 1266
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y+V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1141 WQAGGYKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1181
>gi|281204428|gb|EFA78623.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 1358
Score = 145 bits (365), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/232 (35%), Positives = 123/232 (53%), Gaps = 48/232 (20%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRR-FRNQSGI 80
SI F ++PN+ + + V+ K K +D++ + ++ ++ +SGI
Sbjct: 871 SITFKQSFNRPNLIYAV-------------VKKK----KSIIDDIIEFITANGYKQKSGI 913
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
IY S ECE + +EL ++GL+V YHAK+ +IAFG+GI
Sbjct: 914 IYCFSTFECEKVAQELNSKGLKVKFYHAKMTPEDRQRTQENWTRDRVKIIVSTIAFGMGI 973
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA 182
+KP+VRFVIHH L KS+E +YQESGRAGRD Q AHCILYY D +++ S++ + +G
Sbjct: 974 NKPDVRFVIHHSLPKSLEGYYQESGRAGRDSQTAHCILYYSYADKYRIDSLL-ESSSGQG 1032
Query: 183 -----------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
NL +VSYC + CRR + Y E + T C CD+C+
Sbjct: 1033 STYQSIRENKDNLNKMVSYCENSVDCRRQLQLQYLGEQFDRTICAKTCDNCK 1084
>gi|158290315|ref|XP_311930.4| AGAP002967-PA [Anopheles gambiae str. PEST]
gi|157017834|gb|EAA07614.4| AGAP002967-PA [Anopheles gambiae str. PEST]
Length = 1425
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 73/188 (38%), Positives = 109/188 (57%), Gaps = 30/188 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------- 114
E+ +L+ +RF +GI+Y S KEC+ L +E R G++ +YHA L V
Sbjct: 864 EMIELIRKRFPRDTGIVYCLSKKECDQLADEFRRAGIKAKSYHAGLSDGVREATQKEWIG 923
Query: 115 --------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD 166
+IAFG+GIDKP+VR+V+H+C+ KS+E +YQESGRAGRDG+IA C+LYY D
Sbjct: 924 DRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEIATCVLYYNYSD 983
Query: 167 VFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC--- 215
+ + M+ + +Q + NL+ +V+YC + T CRR YF E ++ +C
Sbjct: 984 MLRYRKMMDNDTSISLEAKQIHMNNLFRMVNYCENVTDCRRTQQLEYFAEYFTSEQCLAN 1043
Query: 216 -RGMCDHC 222
CD+C
Sbjct: 1044 RETACDNC 1051
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 28/31 (90%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V+H+C+ KS+E +YQ
Sbjct: 931 ATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQ 961
>gi|403174685|ref|XP_003333617.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375171080|gb|EFP89198.2| hypothetical protein PGTG_15039 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 796
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 77/214 (35%), Positives = 113/214 (52%), Gaps = 29/214 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL---RNRGLRVSAY 106
YQV KPA D +D++ + + + GIIYT S K+ + + L N + Y
Sbjct: 338 YQVLKKPATNTDLIDQIVEWIEQNHSGSQGIIYTLSQKDTTTVAQGLISQSNGRITTGIY 397
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L + + AFG+GID P+VRFVIHH L KSME +YQESGR
Sbjct: 398 HASLSDSHKHQVHTDWREGSIQVVCATTAFGMGIDAPHVRFVIHHTLPKSMEGYYQESGR 457
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDGQ++ C+L+++ D+ +LS MV + G+ LY++ Y + RCR + A YF+
Sbjct: 458 AGRDGQVSDCLLFWKTSDLLRLSGMVASEVDGIPKLYSMTKYATELERCRSLLFAEYFNT 517
Query: 209 AWSDT--------ECRGMCDHCRGGRRDAKRVDV 234
+ S E G CD+C+ + K+ D+
Sbjct: 518 SHSGADSVLPFSQEACGNCDNCKRDPSEIKQEDL 551
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV + AFG+GID P+VRFVIHH L KSME +YQ
Sbjct: 413 WREGSIQVVCATTAFGMGIDAPHVRFVIHHTLPKSMEGYYQ 453
>gi|321478461|gb|EFX89418.1| DNA helicase bloom's syndrome protein A [Daphnia pulex]
Length = 1276
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 85/251 (33%), Positives = 136/251 (54%), Gaps = 39/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQK- 60
L++ + F V P VRF I L+ + +F + +K P K
Sbjct: 661 LSVLKEKFPTVPTMALTATATPRVRFDILRQLNMRNPKWFLSSFNRPNLKYCVLPKKMKA 720
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
L E+A+L+++RF +SGI+Y S +EC+++ + L++ ++ +YHA L +
Sbjct: 721 GVLTEIAELITKRFDRKSGIVYCLSRRECDEVAQSLQSSRIKAISYHAGLSDELRSESQL 780
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+++ C LYY
Sbjct: 781 KWINGTVQVVCATIAFGMGIDKPDVRFVIHFSLPKSIEGYYQESGRAGRDGELSQCYLYY 840
Query: 163 RLPDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
DV ++ M+ +QT + NL+ +V++C ++T CRR++ YF E + C
Sbjct: 841 SYKDVLRMRRMIEMDRENFAARQTHIDNLWRMVAFCENKTDCRRSLQLGYFGEHFDSQTC 900
Query: 216 ----RGMCDHC 222
+ +CD+C
Sbjct: 901 KSNTKSVCDNC 911
>gi|406866234|gb|EKD19274.1| QDE3-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1765
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 112/202 (55%), Gaps = 28/202 (13%)
Query: 49 FYQVRIK--PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSA 105
+Y+VR+K + E+ +L+ ++NQ+GIIY S K CEDL ++L N LR
Sbjct: 1101 YYEVRLKRGKGVLAKMVTEIVELVRDTYKNQTGIIYALSQKGCEDLAQKLANEHNLRAYH 1160
Query: 106 YHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESG 147
YHA + +IAFG+GIDKP+VRFVIH + KS+E +YQE+G
Sbjct: 1161 YHAGMNREDKATVLQDWQTGKIQVVVATIAFGMGIDKPDVRFVIHSSVPKSLEGYYQETG 1220
Query: 148 RAGRDGQIAHCILYYRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRA 200
RAGRDG+ + C LY+ D L + DQ+ N L N+V YC ++T CRR+
Sbjct: 1221 RAGRDGKRSGCYLYFGYQDTSTLKKFIEDSEGNEDQKNRQRNMLKNMVGYCENRTDCRRS 1280
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ YF E +S +CR CD+C
Sbjct: 1281 QVLRYFGEKFSREDCRQSCDNC 1302
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/44 (56%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L W+T QV +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1174 LQDWQTGKIQVVVATIAFGMGIDKPDVRFVIHSSVPKSLEGYYQ 1217
>gi|195451292|ref|XP_002072850.1| GK13825 [Drosophila willistoni]
gi|194168935|gb|EDW83836.1| GK13825 [Drosophila willistoni]
Length = 1457
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 111/200 (55%), Gaps = 30/200 (15%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
++ P L++++ + R N SGIIY S KEC+D+ +++ G+R AYHA L
Sbjct: 895 KVLPKKGASTLEDISAFIKSRPANSSGIIYCLSRKECDDVSQKMCKAGIRSVAYHAGLSD 954
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG
Sbjct: 955 TERESRQKDWILSKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGD 1014
Query: 155 IAHCILYYRLPDVFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
IA CILYY D+ +L M+ ++ + NLY IV YC + T CRRA YF
Sbjct: 1015 IAECILYYNYSDMLRLKKMLDGDRALNYNVKKMHIDNLYRIVGYCENITDCRRAQQLDYF 1074
Query: 207 DEAWSDTEC----RGMCDHC 222
E ++ +C + CD+C
Sbjct: 1075 GEHFTSEQCLENRKTACDNC 1094
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 974 ATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 1004
>gi|156844324|ref|XP_001645225.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
gi|156115884|gb|EDO17367.1| hypothetical protein Kpol_1060p23 [Vanderwaltozyma polyspora DSM
70294]
Length = 1280
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 112/200 (56%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
YQV+ A K+ ++E+ L+ RF+NQSGIIY S CE + E++ +R + YHA
Sbjct: 731 YQVK---AKSKETINEICTLLKGRFKNQSGIIYCHSKNSCEQVAEQISQHKIRCAFYHAG 787
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
++ ++AFG+GIDKP+VR+V H+ + +++E +YQE+GRAGR
Sbjct: 788 IDPAERLQIQKAWQKNQIQVICATVAFGMGIDKPDVRYVFHYTVPRTLEGYYQETGRAGR 847
Query: 152 DGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
DG ++CI Y+ DV L +M+ ++Q L L + SYC + T CRR I
Sbjct: 848 DGLYSYCICYFSFKDVRTLQTMIQKDKNLDRINKQKHLEKLQQVASYCDNVTDCRRHQIL 907
Query: 204 SYFDEAWSDTECRGMCDHCR 223
YF+E + + C CD+C+
Sbjct: 908 KYFNEDFDPSLCEKNCDNCK 927
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV ++AFG+GIDKP+VR+V H+ + +++E +YQ
Sbjct: 800 WQKNQIQVICATVAFGMGIDKPDVRYVFHYTVPRTLEGYYQ 840
>gi|169618104|ref|XP_001802466.1| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
gi|160703551|gb|EAT80652.2| hypothetical protein SNOG_12240 [Phaeosphaeria nodorum SN15]
Length = 1681
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 111/189 (58%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K+ ++++A L+ + +SGIIY S K CE + E+L N G+ YHA +E
Sbjct: 984 KNIINDIAKLIKEKHDKKSGIIYCLSRKSCEQVAEKLSNLGISAFHYHAGMEPAERSAVQ 1043
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+V+HH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 1044 RKWQHNEYHVIVATIAFGMGIDKADVRYVVHHTLPKSLEGYYQETGRAGRDGKRSDCYLY 1103
Query: 162 YRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y+ D L M+ ++Q+ L + L +++ +C ++ CRRA + YF E++ ++
Sbjct: 1104 YQYGDCRSLRKMIDDGEGSWEQKQRLHDMLRSVIQFCENKADCRRAQVLGYFSESFDPSK 1163
Query: 215 CRGMCDHCR 223
C+ CD+CR
Sbjct: 1164 CKSTCDNCR 1172
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Y V +IAFG+GIDK +VR+V+HH L KS+E +YQ
Sbjct: 1046 WQHNEYHVIVATIAFGMGIDKADVRYVVHHTLPKSLEGYYQ 1086
>gi|336265633|ref|XP_003347587.1| SGS1 protein [Sordaria macrospora k-hell]
gi|380096454|emb|CCC06502.1| putative SGS1 protein [Sordaria macrospora k-hell]
Length = 2276
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 118/204 (57%), Gaps = 29/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y+VR+K +++ + +A+L+ ++ Q+GIIYT S K E++ + L + G+R YH
Sbjct: 1418 YYEVRLK---EQNLVARIAELIQEKYDGQTGIIYTLSRKSAENIAKNLEEKHGIRAKHYH 1474
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + + +IAFG+GIDKP+VRFVIH + KS+E +YQE+GRA
Sbjct: 1475 ASITTEEKIKVQHDWQAGDVKVVVATIAFGMGIDKPDVRFVIHQHIPKSLEGYYQETGRA 1534
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMV------FDQQTGLANLYN-IVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ ++Q+ ++ N +V+YC Q CRR +
Sbjct: 1535 GRDGKPSDCYLYFAYGDIQSLRRMIAEGDGDYEQKERQKHMLNMVVNYCESQHTCRREEV 1594
Query: 203 ASYFDEAWSDTECRGMCDHCRGGR 226
YF E + +C+ CD+CR GR
Sbjct: 1595 LRYFGEEFDFRKCKDGCDNCRYGR 1618
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1500 TIAFGMGIDKPDVRFVIHQHIPKSLEGYYQ 1529
>gi|330795187|ref|XP_003285656.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
gi|325084382|gb|EGC37811.1| hypothetical protein DICPUDRAFT_5670 [Dictyostelium purpureum]
Length = 529
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 117/203 (57%), Gaps = 32/203 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y V KP KD ++A+ + +++ ++SGIIY S +CE + +L G++ + YH
Sbjct: 205 YYHVMKKP---KDVSKQMAEFIKKQYPDKSGIIYCLSKYDCEKISGDLNTEYGIKSAYYH 261
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E + +IAFG+GI+KP+VRFV HH + KS+E +YQESGRA
Sbjct: 262 AGMEIHSRNQVQDRWQKGRIKVIVATIAFGMGINKPDVRFVFHHSIPKSLEGYYQESGRA 321
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMV----------FDQQTGLANLYNIVSYCLDQTRCRR 199
GRDG +HCILYY+ D ++ +++ ++ + NL +VSYC + T CRR
Sbjct: 322 GRDGLKSHCILYYKWADKLRIETLIMLSSKENGTHYNLKESKTNLNKMVSYCENDTDCRR 381
Query: 200 AIIASYFDEAWSDTECRGMCDHC 222
++ SYF E + ++C CD+C
Sbjct: 382 SLQLSYFGEKFDKSKCGKTCDNC 404
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFV HH + KS+E +YQ
Sbjct: 287 TIAFGMGINKPDVRFVFHHSIPKSLEGYYQ 316
>gi|322801995|gb|EFZ22532.1| hypothetical protein SINV_04660 [Solenopsis invicta]
Length = 1148
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 86/247 (34%), Positives = 131/247 (53%), Gaps = 38/247 (15%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKDCLDE 65
R ++ +V P VR I H L + M +F + ++ K+C DE
Sbjct: 671 RDNYPKVPTMALTATATPRVRTDILHQLGMTNPKWFMSSFNRPNLRYSIIAKKGKNCSDE 730
Query: 66 LADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SN-------- 113
+ ++ +F+N GI+Y S K+C+D +++ G++ +YHA L SN
Sbjct: 731 IVAMIMTKFKNACGIVYCLSRKDCDDYAAQMKKNGIKALSYHAGLSDVQRSNCQGKWISD 790
Query: 114 ------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRDG+ A CIL+Y D+
Sbjct: 791 EIRVICATIAFGMGIDKPNVRFVIHAALPKSIEGYYQESGRAGRDGETADCILFYNYSDM 850
Query: 168 FKLSSMV-FDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----R 216
++ M+ D T + NL+ +V++C + T CRR++ +YF E + +C
Sbjct: 851 HRIRKMLELDNPSPQVINTHMDNLFKMVAFCENSTDCRRSLQLNYFGEIFDRQQCIMNKI 910
Query: 217 GMCDHCR 223
CD+CR
Sbjct: 911 TACDNCR 917
>gi|302308466|ref|NP_985391.2| AFL159Wp [Ashbya gossypii ATCC 10895]
gi|299790644|gb|AAS53215.2| AFL159Wp [Ashbya gossypii ATCC 10895]
Length = 1323
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 26/192 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K+ L +++ + RF+ Q+GIIY S CE +++ G+R + YHA +E +
Sbjct: 770 KNSLKDISHSIKTRFKGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQ 829
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GIDKP+VRFV H+ + +++E +YQE+GRAGRDG+ ++CI+Y
Sbjct: 830 QQWQSDKIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMY 889
Query: 162 YRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV + SM+ +++ L L ++ YC + T CRR ++ SYF+E +S
Sbjct: 890 YSFRDVRNIQSMIQKDKNLDRENKEKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSSQ 949
Query: 214 ECRGMCDHCRGG 225
EC CD+C+ G
Sbjct: 950 ECSKNCDNCQNG 961
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 8 IAYLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+A W++ QV ++AFG+GIDKP+VRFV H+ + +++E +YQ
Sbjct: 826 LAIQQQWQSDKIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQ 872
>gi|374108619|gb|AEY97525.1| FAFL159Wp [Ashbya gossypii FDAG1]
Length = 1323
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 112/192 (58%), Gaps = 26/192 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K+ L +++ + RF+ Q+GIIY S CE +++ G+R + YHA +E +
Sbjct: 770 KNSLKDISHSIKTRFKGQTGIIYCHSKNSCEQTAAIVQDSGVRCAYYHAGMEPDERLAIQ 829
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GIDKP+VRFV H+ + +++E +YQE+GRAGRDG+ ++CI+Y
Sbjct: 830 QQWQSDKIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQETGRAGRDGKYSYCIMY 889
Query: 162 YRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV + SM+ +++ L L ++ YC + T CRR ++ SYF+E +S
Sbjct: 890 YSFRDVRNIQSMIQKDKNLDRENKEKHLTKLQQVMQYCENTTDCRRQLVLSYFNEQFSSQ 949
Query: 214 ECRGMCDHCRGG 225
EC CD+C+ G
Sbjct: 950 ECSKNCDNCQNG 961
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 3/47 (6%)
Query: 8 IAYLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+A W++ QV ++AFG+GIDKP+VRFV H+ + +++E +YQ
Sbjct: 826 LAIQQQWQSDKIQVICATVAFGMGIDKPDVRFVYHYTVPRTLEGYYQ 872
>gi|320167845|gb|EFW44744.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 1784
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 76/207 (36%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
YQV K K LD++A ++ +++ SGI+Y S K+CE + EL RG+ + YHA
Sbjct: 1033 YQVYKK---DKTTLDDIARMIKKQWPKDSGIVYCLSRKDCETVARELVQRGIAATFYHAG 1089
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
++ +IAFG+GI+KP+VR+V H+ L KS+E +YQESGRAGR
Sbjct: 1090 MDPGDRAVVQRDWIGNRKQVIVATIAFGMGINKPDVRYVFHYSLPKSLEGYYQESGRAGR 1149
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQTGLA-------NLYNIVSYCLDQTRCRRAIIAS 204
DG AHCI+YY D K+ SM+ + NL ++ YC + CRR +
Sbjct: 1150 DGYEAHCIMYYSYGDKSKMESMIEKGDSSAEQKRIHKDNLAKMIMYCENVVECRRVQQLA 1209
Query: 205 YFDEAWSDTECRGMCDHCRGGRRDAKR 231
YF E + C+ CD+CR +R
Sbjct: 1210 YFGEKFDRALCKRTCDNCRSSTHYVER 1236
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 19/37 (51%), Positives = 27/37 (72%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GI+KP+VR+V H+ L KS+E +YQ
Sbjct: 1106 RKQVIVATIAFGMGINKPDVRYVFHYSLPKSLEGYYQ 1142
>gi|358387252|gb|EHK24847.1| hypothetical protein TRIVIDRAFT_212358 [Trichoderma virens Gv29-8]
Length = 1658
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 69/202 (34%), Positives = 117/202 (57%), Gaps = 26/202 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++ ++A L++ ++ N +GI+YT S K+ ED+ ++L + G+ YHA
Sbjct: 984 YYEVRPK-SSNPVVTQQIAALINSKYPNVTGIVYTISRKQAEDVAQKLSDNGITARHYHA 1042
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VR+VIHH + KS+E +YQE+GRAG
Sbjct: 1043 AITPTEKVEVQTAWQKGQVKVVVATIAFGMGIDKPDVRYVIHHGIPKSLEGYYQETGRAG 1102
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL+Y D+ L ++ D ++ +A L + ++C ++ CRR +
Sbjct: 1103 RDGKPSDCILFYGKADIRVLKKLIMDGDGSKDQKERQMAMLNRVTAFCDNKADCRRTEVL 1162
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E ++ ++C CD+C+ G
Sbjct: 1163 RYFGEDFTPSQCHKTCDNCQAG 1184
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E +YQ
Sbjct: 1067 TIAFGMGIDKPDVRYVIHHGIPKSLEGYYQ 1096
>gi|380491813|emb|CCF35054.1| RecQ family ATP-dependent DNA helicase [Colletotrichum higginsianum]
Length = 1601
Score = 144 bits (362), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 115/202 (56%), Gaps = 29/202 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K +K+ + ++ADL+ ++ Q GIIYT S K E + E+LR++ G++ + YHA
Sbjct: 911 YEVRRK---EKELIHKIADLIMSKYDGQCGIIYTLSRKTSEQVAEKLRSQYGVKANHYHA 967
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 968 QMTPEDRIRVQREWQADKIHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAG 1027
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG + CIL++ DV L M+ D + L + ++C ++ CRR I
Sbjct: 1028 RDGNPSDCILFFGYQDVATLKKMIADGEGSEVQKERQRIMLNRVTAFCDNRENCRRVEIL 1087
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E ++ +C CD+CR G
Sbjct: 1088 RYFGEVFNSDDCEKTCDNCRAG 1109
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 991 ATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQ 1021
>gi|241952456|ref|XP_002418950.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
gi|223642289|emb|CAX44258.1| ATP-dependent helicase, putative [Candida dubliniensis CD36]
Length = 1164
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/253 (33%), Positives = 125/253 (49%), Gaps = 44/253 (17%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN-------------FYQVRIKPA 57
L ++ F +V I VR I H L M+N FY+++ K
Sbjct: 589 LGFFKDKFPKVPIMALTATANEKVRMDILHNLK--MDNPVLLKQSFNRTNLFYEIKWKSG 646
Query: 58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---- 113
+ L E+ D + RF+ ++GIIY S + CE +L GL+ S YHA + ++
Sbjct: 647 ---NYLLEIKDYILSRFKGKTGIIYCHSKQSCEQTSMKLNEYGLKTSFYHAGMSADSRFN 703
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VRFVIH L +++E +YQE+GRAGRDG + C+
Sbjct: 704 IQKRWQESKIQVICATIAFGMGIDKPDVRFVIHLFLPRTLEGYYQETGRAGRDGNYSECV 763
Query: 160 LYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
+YY D L S++ ++ LA L +V YC + T CRR + YF+E +
Sbjct: 764 MYYSYKDARSLQSLIQRDEELSELGKENHLAKLRQVVQYCENTTDCRRKQVLQYFNETFD 823
Query: 212 DTECRGMCDHCRG 224
C+ CD+CR
Sbjct: 824 PVNCKKQCDNCRN 836
>gi|344302418|gb|EGW32692.1| hypothetical protein SPAPADRAFT_49652 [Spathaspora passalidarum
NRRL Y-27907]
Length = 1278
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 72/201 (35%), Positives = 109/201 (54%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ K A LD + D + R+F+N++GIIY S + CE + L GL + YHA
Sbjct: 737 FYEVQWKNANH---LDVIKDYIFRKFKNKTGIIYCHSKQSCEQTSQRLNQLGLHSAYYHA 793
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ S +IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAG
Sbjct: 794 GMSSEDRIEVQTQWQENKVYVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 853
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ + C++++ D L SM+ +++ + L +V YC + CRR +
Sbjct: 854 RDGKPSECLMFFNTRDAHHLRSMIIRDKSLNKMSRESHMVKLKQVVQYCENVIDCRRKQV 913
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
YF+E + C CD+CR
Sbjct: 914 LHYFNETFDPKLCHQQCDNCR 934
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + +S+E +YQ
Sbjct: 818 TIAFGMGIDKPDVRFVIHLFIPRSLEGYYQ 847
>gi|310790854|gb|EFQ26387.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 1602
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 114/202 (56%), Gaps = 29/202 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K +K+ + ++ADL+ ++ Q GIIYT S K E + E+LR++ ++ S YHA
Sbjct: 916 YEVRRK---EKELIHKIADLIMSKYNGQCGIIYTLSRKTSEQVAEKLRSQYNIKASHYHA 972
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 973 QMTPEDRIRVQREWQADKIHVVVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAG 1032
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG + CIL++ DV L M+ D + L + ++C ++ CRR I
Sbjct: 1033 RDGNPSDCILFFGYQDVATLKKMIADGEGSETQKERQRIMLNRVTAFCDNRENCRRVEIL 1092
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF E ++ +C CD+CR G
Sbjct: 1093 RYFGEVFNADDCEKTCDNCRAG 1114
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 996 ATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQ 1026
>gi|115399192|ref|XP_001215185.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192068|gb|EAU33768.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1367
Score = 143 bits (360), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 119/201 (59%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHA 108
Y+VR KP+ + + L +A++++ ++ NQSGIIY S CE + + LR + G++ YHA
Sbjct: 905 YEVRPKPS-KNELLASIANIITTKYPNQSGIIYCLSRDSCEKVAKSLREDYGIKAEHYHA 963
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + +IAFG+GIDKP+VR+VIHH L KS+E +YQE+GRAG
Sbjct: 964 GMKPDERNQVQHGWQAGRSHVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQETGRAG 1023
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C +YY D ++ M+ D+ G L+N+V YC +++ CRR I
Sbjct: 1024 RDGKRSGCYMYYCYKDAMTITRMI-DRGEGSKQQKSRQRQMLHNVVQYCENKSDCRRVQI 1082
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1083 LAYFNEYFRREDCNSSCDNCK 1103
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R+ +IAFG+GIDKP+VR+VIHH L KS+E +YQ
Sbjct: 981 RSHVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQ 1017
>gi|238883901|gb|EEQ47539.1| hypothetical protein CAWG_06119 [Candida albicans WO-1]
Length = 1195
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++++K + +CL E+ D + RF +SGIIY S + CE +L GL+ S YHA
Sbjct: 669 FYEIKLK---KSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHA 725
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ ++ +IAFG+GIDKP+VRFVIH L +++E +YQE+GRAG
Sbjct: 726 GMSADKRFNIQKRWQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAG 785
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG + C++YY D L +++ +++ LA L ++ YC + T CRR +
Sbjct: 786 RDGNFSECVMYYCYKDARSLQNLIQRDEELSESGRESHLAKLRQVIQYCENTTDCRRKQV 845
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
YF+E + C CD+CR
Sbjct: 846 LQYFNETFDPANCHKQCDNCR 866
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV +IAFG+GIDKP+VRFVIH L +++E +YQ
Sbjct: 739 WQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQ 779
>gi|68477651|ref|XP_717138.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
gi|68477814|ref|XP_717059.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438756|gb|EAK98082.1| hypothetical protein CaO19.12795 [Candida albicans SC5314]
gi|46438838|gb|EAK98163.1| hypothetical protein CaO19.5335 [Candida albicans SC5314]
Length = 1189
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 112/201 (55%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++++K + +CL E+ D + RF +SGIIY S + CE +L GL+ S YHA
Sbjct: 663 FYEIKLK---KSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHA 719
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ ++ +IAFG+GIDKP+VRFVIH L +++E +YQE+GRAG
Sbjct: 720 GMSADKRFNIQKRWQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAG 779
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG + C++YY D L +++ +++ LA L ++ YC + T CRR +
Sbjct: 780 RDGNFSECVMYYCYKDARSLQNLIQRDEELSESGRESHLAKLRQVIQYCENTTDCRRKQV 839
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
YF+E + C CD+CR
Sbjct: 840 LQYFNETFDPANCHKQCDNCR 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV +IAFG+GIDKP+VRFVIH L +++E +YQ
Sbjct: 733 WQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQ 773
>gi|159129033|gb|EDP54147.1| RecQ family helicase MusN [Aspergillus fumigatus A1163]
Length = 1563
Score = 142 bits (359), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 27/200 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L+ +AD++ + N+SGIIY S K CE + E L ++ +R YHA
Sbjct: 935 YEVRQK-TKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHA 993
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S+ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 994 GMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1053
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG+ + C LYY D + SM+ + G L N++ YCL+ CRR I
Sbjct: 1054 RDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQRQMLRNVMQYCLNLADCRRVQIL 1113
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+CR
Sbjct: 1114 AYFNEYFRPIDCNKSCDNCR 1133
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1007 WQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1047
>gi|123426519|ref|XP_001307056.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121888663|gb|EAX94126.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1279
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 74/214 (34%), Positives = 119/214 (55%), Gaps = 28/214 (13%)
Query: 37 VIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRR-FRNQSGIIYTTSIKECEDLREE 95
+ H ++ NF +V K + C +++ + + ++ + N SGII+ + + E++
Sbjct: 754 IFHQTFNRPNINF-EVHAKEGTTEGCYNQIVNWIYQKGYDNASGIIFCMTTRTTEEMSIY 812
Query: 96 LRNRGLRVSAYHAKL---------------ESNV---SIAFGLGIDKPNVRFVIHHCLSK 137
L RGLR YH K+ E N+ ++AFG+GI+KP+VRFVIHH + K
Sbjct: 813 LNQRGLRTLHYHGKMDMEHRKDTQDRWMRNEINIVVATLAFGMGINKPDVRFVIHHSIPK 872
Query: 138 SMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVS 189
S+E +YQE+GR+GRDG+ CIL Y D+ KL ++ + G + LY +
Sbjct: 873 SIEEYYQEAGRSGRDGKKTDCILLYSSADIDKLLYIICENTPGSQELDRNKVDMLYKMEE 932
Query: 190 YCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
YCL++ CRR+++ YF E ++ EC MCD+CR
Sbjct: 933 YCLNKKDCRRSLLLQYFGEQFNPEECHEMCDNCR 966
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH + KS+E +YQ
Sbjct: 850 TLAFGMGINKPDVRFVIHHSIPKSIEEYYQ 879
>gi|146322807|ref|XP_749627.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
gi|129556812|gb|EAL87589.2| RecQ family helicase MusN [Aspergillus fumigatus Af293]
Length = 1563
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 113/200 (56%), Gaps = 27/200 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L+ +AD++ + N+SGIIY S K CE + E L ++ +R YHA
Sbjct: 935 YEVRQK-TKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHA 993
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S+ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 994 GMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1053
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG+ + C LYY D + SM+ + G L N++ YCL+ CRR I
Sbjct: 1054 RDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQRQMLRNVMQYCLNLADCRRVQIL 1113
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+CR
Sbjct: 1114 AYFNEYFRPIDCNKSCDNCR 1133
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1007 WQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1047
>gi|392587356|gb|EIW76690.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 898
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 127/251 (50%), Gaps = 38/251 (15%)
Query: 11 LNLWRTSFYQVSI-AFGLGIDKPNVRFVIHHCLSKS----MENF------YQVRIKPAAQ 59
LN+ R + V I A D+ +R + K M++F Y VR KP +
Sbjct: 326 LNVLRNKWPNVPIMALTATADETAIRDITTQLQLKDEVKLMQSFNRPNLSYTVRPKPNNK 385
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESNV---- 114
K E+A + R N SG++Y S +CE++ +LR+ GL YHA +++
Sbjct: 386 KQATHEIATFIKSRHPNSSGVVYCWSRNDCEEVASQLRDDFGLSAHYYHAGIDTATRPVI 445
Query: 115 --------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH L K M+ +YQE+GRAGRDG + C+L
Sbjct: 446 QSDWLSGKFKIVVATIAFGMGIDKPDVRFVIHHSLPKDMDGYYQETGRAGRDGLQSDCVL 505
Query: 161 YYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
++ D+ SSMV +++ A L + +YC ++ CRR ++ +F E +
Sbjct: 506 FFSNKDLMARSSMVQNDSEKSAEEKERQAAALRAVATYCSNEVECRRTMVLRHFGEKFDP 565
Query: 213 TECRGMCDHCR 223
C CD+CR
Sbjct: 566 ANCHKQCDNCR 576
>gi|340522439|gb|EGR52672.1| hypothetical protein TRIREDRAFT_102458 [Trichoderma reesei QM6a]
Length = 1690
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 75/223 (33%), Positives = 122/223 (54%), Gaps = 29/223 (13%)
Query: 31 KPNVRFVIHHCLSKSMEN---FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIK 87
K N+R S+S +Y+VR K + ++A L+ ++ N +GIIYT S K
Sbjct: 989 KHNLRMKNCQVFSQSFNRPNLYYEVRPK-GSNPVVTQQIAALIKAKYPNVTGIIYTISRK 1047
Query: 88 ECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRF 129
+ ED+ ++L G+ YHA++ + +IAFG+GIDKP+VR+
Sbjct: 1048 QAEDVAQKLCEHGITARHYHAQITPSEKVEVQTAWQKGQIKVVVATIAFGMGIDKPDVRY 1107
Query: 130 VIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLA 182
VIHH + KS+E +YQE+GRAGRDG+ + CIL+Y D+ L ++ D ++ +
Sbjct: 1108 VIHHGIPKSLEGYYQETGRAGRDGKPSDCILFYGKGDIRVLKKLILDGEGNNEQKERQMV 1167
Query: 183 NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
L + ++C ++ CRR + YF E +S ++C CD+C+ G
Sbjct: 1168 MLNRVTAFCDNKADCRRTEVLRYFGEDFSPSQCNKTCDNCQAG 1210
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E +YQ
Sbjct: 1093 TIAFGMGIDKPDVRYVIHHGIPKSLEGYYQ 1122
>gi|440468642|gb|ELQ37793.1| RecQ helicase MUSN [Magnaporthe oryzae Y34]
gi|440478855|gb|ELQ59654.1| RecQ helicase MUSN [Magnaporthe oryzae P131]
Length = 1780
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL-RNRGLRVSAYH 107
+Y VR K K+ L +A+L+ R +Q+GIIYT + K E++ ++L + G+ AYH
Sbjct: 1074 YYDVRPK---GKNLLQSIAELIQERHADQTGIIYTLARKSSENIAKKLVQTYGISAEAYH 1130
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E++ +IAFG+GIDKP+VRFVIH L KS+E +YQE+GRA
Sbjct: 1131 AGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRA 1190
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYN-IVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ + Q+ A + N ++ YC ++ CRR I
Sbjct: 1191 GRDGEKSDCYLYFGYGDISTLRKMIKEGEGSDQQKERQAEMLNRVIEYCENKRDCRRVEI 1250
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
YF E + EC CD+CR G
Sbjct: 1251 LRYFGERFDKNECDASCDNCRDG 1273
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 1155 ATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQ 1185
>gi|389625891|ref|XP_003710599.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
gi|351650128|gb|EHA57987.1| RecQ helicase MUSN [Magnaporthe oryzae 70-15]
Length = 1780
Score = 142 bits (358), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 78/203 (38%), Positives = 115/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL-RNRGLRVSAYH 107
+Y VR K K+ L +A+L+ R +Q+GIIYT + K E++ ++L + G+ AYH
Sbjct: 1074 YYDVRPK---GKNLLQSIAELIQERHADQTGIIYTLARKSSENIAKKLVQTYGISAEAYH 1130
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E++ +IAFG+GIDKP+VRFVIH L KS+E +YQE+GRA
Sbjct: 1131 AGMETDKKTDIQRKWQRGTIKVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRA 1190
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYN-IVSYCLDQTRCRRAII 202
GRDG+ + C LY+ D+ L M+ + Q+ A + N ++ YC ++ CRR I
Sbjct: 1191 GRDGEKSDCYLYFGYGDISTLRKMIKEGEGSDQQKERQAEMLNRVIEYCENKRDCRRVEI 1250
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
YF E + EC CD+CR G
Sbjct: 1251 LRYFGERFDKNECDASCDNCRDG 1273
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 1155 ATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQ 1185
>gi|67523261|ref|XP_659691.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|8101762|gb|AAF72650.1|AF259396_1 RecQ helicase MUSN [Emericella nidulans]
gi|40745763|gb|EAA64919.1| hypothetical protein AN2087.2 [Aspergillus nidulans FGSC A4]
gi|259487457|tpe|CBF86151.1| TPA: Putative uncharacterized proteinRecQ helicase MUSN ;
[Source:UniProtKB/TrEMBL;Acc:Q9P8H3] [Aspergillus
nidulans FGSC A4]
Length = 1534
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 28/203 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHA 108
Y+VR K + LD +AD + +RN+ GI+Y S CE + E LR N ++ YHA
Sbjct: 903 YEVRRK-GKHAELLDSIADTIKSTYRNKCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHA 961
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 962 GLDAETRARTQQRWQAGDVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1021
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF------DQQTGLAN--LYNIVSYCLDQTRCRRAII 202
RDG+ + C LY+ DV + SM+ D Q G L ++V YC + CRR I
Sbjct: 1022 RDGRRSGCYLYFSHRDVSTMQSMIEKNEDSDDVQKGRQTRMLNDVVKYCENANDCRRVQI 1081
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
+YF E++ +C CD+C+ G
Sbjct: 1082 LAYFSESFKRQDCNASCDNCKSG 1104
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 985 ATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1015
>gi|281206277|gb|EFA80466.1| ATP-dependent DNA helicase RecQ family protein [Polysphondylium
pallidum PN500]
Length = 842
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/256 (34%), Positives = 127/256 (49%), Gaps = 49/256 (19%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENF-------------YQVRIKPA 57
L+ +R F + I P V I LS M N Y+VR K
Sbjct: 540 LSKFREMFPNIPIVALTATATPKVELDIKQQLS--MHNTINIRGSFIRSNLKYEVRKKST 597
Query: 58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---- 113
+ C +++ ++R +N SGI+Y ++I ECE L E L +RGL V YHA L +
Sbjct: 598 EPEFCFNDIYHFVNRNHKNSSGIVYCSTIAECESLCEYLTDRGLSVDFYHASLNAAQRVD 657
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+ RFVIHH + S+E++YQ++GRAGRDG+++ CI
Sbjct: 658 TQERWITGKFKIVCTTIAFGMGIDKPDTRFVIHHSIPSSIESYYQQTGRAGRDGKLSDCI 717
Query: 160 LYYRLPDV---FKLSSMVFDQQ----------TGLANLYNIVSYCLDQTRCRRAIIASYF 206
LYY D+ K+S+M Q + N+ + SYC+ + CRR + YF
Sbjct: 718 LYYNKNDIRKMLKISTMGIVAQSHEEYQKIMESKTENIDTVTSYCVG-SECRRVSLMEYF 776
Query: 207 DEAWSDTECRGMCDHC 222
E C+ MCD+C
Sbjct: 777 GEETK--PCKTMCDNC 790
>gi|198454689|ref|XP_001359676.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
gi|198132910|gb|EAL28826.2| GA19957 [Drosophila pseudoobscura pseudoobscura]
Length = 1349
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 31/212 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
++ P +D+++ + + N SGIIY S KEC+++ +++ G+R AYHA L
Sbjct: 787 KVLPKKGASTIDDMSAYIRTKPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTD 846
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+ +IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG+
Sbjct: 847 SEREGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGE 906
Query: 155 IAHCILYYRLPDVFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
+A CILYY D+ +L M+ ++ + NLY IV YC + T CRRA YF
Sbjct: 907 VADCILYYNYSDMLRLKKMMDGDKALQYNVKKMHIDNLYRIVGYCENITDCRRAQQLDYF 966
Query: 207 DEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
E ++ +C CD+C G +R + VD
Sbjct: 967 GEHFTSEQCLENRATACDNC-GNKRAYQPVDA 997
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ +V +IAFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 856 WLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 896
>gi|390357198|ref|XP_781064.3| PREDICTED: uncharacterized protein LOC575579 [Strongylocentrotus
purpuratus]
Length = 1391
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 121/214 (56%), Gaps = 37/214 (17%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA---- 108
R++ ++ + L++ +F+ +SGI+Y S ECE + ++L N G++ S YHA
Sbjct: 979 RVEKKQPSKMIENITKLINSQFKGKSGIVYCLSRNECEKVADDLSNAGIKASPYHAGQSD 1038
Query: 109 KLESNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
K S V +IAFG+GIDK +VRFVIH+ + KS+E +YQE+GRAGRDG
Sbjct: 1039 KERSTVQTRWINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEGYYQEAGRAGRDGG 1098
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTG---------LANLYNIVSYCLDQTRCRRAIIASY 205
+AHC+LY+ DV +L M+ ++ G + NLY +V YC ++ CRR I+ SY
Sbjct: 1099 LAHCVLYFSYQDVTRLRRMI--EKNGDNYNATKVHVDNLYGMVQYCDNKADCRRVIMLSY 1156
Query: 206 FDEAWSDTE-CR----GMCDHCRGGRRDAKRVDV 234
F E D CR CD+C+ DA VDV
Sbjct: 1157 FGETGYDRAICRRRRETACDNCQS---DALFVDV 1187
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Y+V +IAFG+GIDK +VRFVIH+ + KS+E +YQ
Sbjct: 1048 WINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEGYYQ 1088
>gi|195157038|ref|XP_002019403.1| GL12253 [Drosophila persimilis]
gi|194115994|gb|EDW38037.1| GL12253 [Drosophila persimilis]
Length = 1349
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/212 (37%), Positives = 118/212 (55%), Gaps = 31/212 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
++ P +D+++ + + N SGIIY S KEC+++ +++ G+R AYHA L
Sbjct: 787 KVLPKKGASTIDDMSAYIRTKPPNSSGIIYCLSRKECDEVAKKMCKDGVRAVAYHAGLTD 846
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+ +IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG+
Sbjct: 847 SEREGRQKDWLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGE 906
Query: 155 IAHCILYYRLPDVFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
+A CILYY D+ +L M+ ++ + NLY IV YC + T CRRA YF
Sbjct: 907 VADCILYYNYSDMLRLKKMMDGDKALQYNVKKMHIDNLYRIVGYCENITDCRRAQQLDYF 966
Query: 207 DEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
E ++ +C CD+C G +R + VD
Sbjct: 967 GEHFTSEQCLENRATACDNC-GNKRAYQPVDA 997
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T+ +V +IAFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 856 WLTNKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 896
>gi|388853955|emb|CCF52453.1| related to SGS1-DNA helicase [Ustilago hordei]
Length = 1290
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 110/200 (55%), Gaps = 27/200 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
YQVR KP ++E++ L+ + Q GIIY S + CE + +L + G+ YHA
Sbjct: 620 YQVRKKPKTNVKAMEEISSLILTSHKGQCGIIYCFSRESCETVAHDLSTQYGISAHHYHA 679
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
KL ++ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 680 KLSADDRAMVQQRWQKNEFQVIVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQETGRAG 739
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CILYY D+ K+ SM+ ++ L +L I +C ++ CRR +
Sbjct: 740 RDGKQSVCILYYSFGDISKMRSMIEKEEGKTQEAKDRALESLDQISRFCKNEIDCRRVQV 799
Query: 203 ASYFDEAWSDTECRGMCDHC 222
YF E +S C CD+C
Sbjct: 800 LRYFGEDFSPEGCASTCDNC 819
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + +QV +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 693 WQKNEFQVIVATIAFGMGIDKPDVRFVIHHSVPKSLEGYYQ 733
>gi|119480183|ref|XP_001260120.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
gi|119408274|gb|EAW18223.1| RecQ family helicase MusN [Neosartorya fischeri NRRL 181]
Length = 1564
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 113/200 (56%), Gaps = 27/200 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L+ +AD++ + N+SGIIY S K CE + E L ++ +R YHA
Sbjct: 937 YEVRQK-TKSAEVLENIADIIKTSYPNKSGIIYCLSRKTCETVAEALTSQHNIRAEYYHA 995
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S+ +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 996 GMDSSKRAEVQEWWQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1055
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG+ + C LYY D + SM+ + G L N++ YCL+ CRR I
Sbjct: 1056 RDGKRSGCYLYYSYRDATSIMSMIDKGEGGKQQKNRQRQMLRNVMQYCLNLADCRRVQIL 1115
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1116 AYFNEYFRQNDCNKSCDNCK 1135
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1009 WQSGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1049
>gi|320581820|gb|EFW96039.1| ATP-dependent helicase [Ogataea parapolymorpha DL-1]
Length = 1277
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 128/249 (51%), Gaps = 34/249 (13%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPA--------AQKDC 62
L+ ++T + ++ + +VR I H L+ F++ + +K
Sbjct: 675 LSYFKTEYPEIPMMALTATANEHVRMDIIHNLNLKHPKFFKQSFNRSNLYYEVLPKKKTV 734
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------- 113
++E+A L++R+++N +GIIY S CE L + G++ YHA + +
Sbjct: 735 VEEIAQLINRKYKNMTGIIYCHSKNSCEQTATRLADYGIKCDFYHAGMTQDDRQRVQLGW 794
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+IAFG+GIDKP+VRFVIH L +++E +YQE+GRAGRDG+ + CI+YY +
Sbjct: 795 QTNEIQVICATIAFGMGIDKPDVRFVIHLTLPRNLEGYYQETGRAGRDGKHSDCIMYYSM 854
Query: 165 PDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D L M+ F+++ + L + YC + T CRR + YF+E ++ +C
Sbjct: 855 RDARTLQGMIMRDKELDRFNKEQHVNKLRQVTQYCENTTDCRRQQVLQYFNETFNRKDCH 914
Query: 217 GMCDHCRGG 225
CD+C G
Sbjct: 915 KQCDNCING 923
>gi|212529002|ref|XP_002144658.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
gi|210074056|gb|EEA28143.1| RecQ family helicase MusN [Talaromyces marneffei ATCC 18224]
Length = 1573
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 71/201 (35%), Positives = 114/201 (56%), Gaps = 28/201 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL-RNRGLRVSAYHA 108
Y V K + D + ++AD++ +R ++GI+Y S K+CE + +EL + ++ + YHA
Sbjct: 908 YDVLPKKGSAPDIISQIADIIETSYRRKAGIVYCLSRKDCEKVAQELSQGYNIKATHYHA 967
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 968 GMPSEERTSVQRDWQAGRYDVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAG 1027
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAII 202
RDG+ + C L+Y D + +Q G L ++V +C +Q+ CRR I
Sbjct: 1028 RDGKRSGCYLFYSYRDTAAQKRFI-EQSEGDWQQKNRQRQMLRHVVQFCENQSDCRRVQI 1086
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E++S ++C CD+C+
Sbjct: 1087 LAYFNESFSVSDCHRTCDNCK 1107
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 981 WQAGRYDVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQ 1021
>gi|50307299|ref|XP_453628.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642762|emb|CAH00724.1| KLLA0D12694p [Kluyveromyces lactis]
Length = 1367
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV K +K+ + ++ D++ +F+NQ+GIIY S CE ++ G++ + YHA
Sbjct: 793 FYQVLKK---EKNSIFQMCDMIRTKFKNQTGIIYCHSKNSCEQTSALMQKNGVKCAFYHA 849
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 850 GMDPDERFQVQQDWQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQETGRAG 909
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG + CI+YY DV + +M+ +++ L L ++ YC ++T CRR ++
Sbjct: 910 RDGNFSQCIMYYSFRDVRTIQTMIQKDKNLDMINKEKHLDKLQQVMQYCDNRTDCRRQLV 969
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + +C CD+C+
Sbjct: 970 LSYFNEQFDPKDCGKNCDNCKNS 992
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 863 WQADRVQVICATVAFGMGIDKPDVRFVFHFTVPRTLEGYYQ 903
>gi|453080950|gb|EMF09000.1| ATP-dependent DNA helicase [Mycosphaerella populorum SO2202]
Length = 1518
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 81/226 (35%), Positives = 120/226 (53%), Gaps = 30/226 (13%)
Query: 27 LGIDKPNVRFVIHHCLSKSMEN-FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTS 85
LG++K N S + EN +Y+VR KP K+ + +AD++ ++GIIY S
Sbjct: 806 LGMEKNNPDKCQVFTQSFNRENLYYEVRPKPKG-KEGISAMADIIKDSHPRETGIIYCLS 864
Query: 86 IKECEDLREEL-RNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
CED+ + L + +R YHA L+ + +IAFG+GIDK N
Sbjct: 865 RANCEDIAKALQKTHKIRAQHYHAGLKGSEKSMVQEEWQAGRIKVIVATIAFGMGIDKSN 924
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--- 183
VRFVIHH + KS+E +YQE+GRAGRDG + C L Y D KL M+ D + +
Sbjct: 925 VRFVIHHTIPKSLEGYYQETGRAGRDGNPSRCYLLYGYGDAGKLRRMIDDPKNEGSREVK 984
Query: 184 ------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
L ++ YC +++ CRR + SYF+E + +C G CD+C+
Sbjct: 985 DMQHQMLRKMIQYCENRSDCRRVQVLSYFNERFDKADCHGGCDNCQ 1030
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFVIHH + KS+E +YQ
Sbjct: 913 TIAFGMGIDKSNVRFVIHHTIPKSLEGYYQ 942
>gi|395330106|gb|EJF62490.1| ATP-dependent RNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 582
Score = 141 bits (355), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 78/200 (39%), Positives = 112/200 (56%), Gaps = 27/200 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + K C+DE+A L+ RF +GIIY S +CE++ +ELR R L +HA
Sbjct: 274 YEVRPK-KSHKACVDEIAALIQTRFPTHTGIIYCHSRDKCEEVAKELRERYKLNAKHFHA 332
Query: 109 KL-------------ESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L E V ++AFG+GIDK +VR+VIHH L ++ N+YQE+GRAG
Sbjct: 333 GLADCDKRRVQREWSEGEVLIIVATVAFGMGIDKADVRYVIHHTLPATLANYYQETGRAG 392
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIA 203
RDG+ AHCIL+Y DV M+ + + +++V YC + RCRR +
Sbjct: 393 RDGRPAHCILFYSYGDVTSRLEMIRKDEKPEEERRWMEEDFWSVVRYCSNDVRCRRQQVL 452
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+F E + CR +CD+CR
Sbjct: 453 DFFGEKFDPALCRDLCDNCR 472
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK +VR+VIHH L ++ N+YQ
Sbjct: 356 ATVAFGMGIDKADVRYVIHHTLPATLANYYQ 386
>gi|443898809|dbj|GAC76143.1| hypothetical protein PANT_19d00137 [Pseudozyma antarctica T-34]
Length = 1364
Score = 140 bits (354), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 112/200 (56%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
YQVR KP + L+E++ L+ ++Q GIIY S + CE + +L + G+ YHA
Sbjct: 851 YQVRPKPGNK--VLEEISSLILTSHKDQCGIIYCFSRESCETVAHDLSTKYGISAHHYHA 908
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
KL ++ +IAFG+GIDKP+VRFVIHH KS+E +YQE+GRAG
Sbjct: 909 KLSADDRAMVQQKWQQNKFRVIVATIAFGMGIDKPDVRFVIHHSAPKSLEGYYQETGRAG 968
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CILYY D+ K+ SM+ ++ + +L +I +C ++ CRR +
Sbjct: 969 RDGKSSVCILYYNYADINKMKSMIEKEEDKSPEAKERAIQSLDDIARFCNNKIECRRVQV 1028
Query: 203 ASYFDEAWSDTECRGMCDHC 222
YF E +S C CD+C
Sbjct: 1029 LRYFGETFSAAMCHNTCDNC 1048
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + ++V +IAFG+GIDKP+VRFVIHH KS+E +YQ
Sbjct: 922 WQQNKFRVIVATIAFGMGIDKPDVRFVIHHSAPKSLEGYYQ 962
>gi|195396248|ref|XP_002056744.1| GJ10048 [Drosophila virilis]
gi|194143453|gb|EDW59856.1| GJ10048 [Drosophila virilis]
Length = 1324
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 93/263 (35%), Positives = 133/263 (50%), Gaps = 40/263 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVR------FVIHHC---LSKSMENFYQVRIKPAAQKD 61
L + R F V P VR + HC LS + + ++ P
Sbjct: 715 LGILRKRFPNVPSMALTATATPRVRQDILQQLNLTHCKWFLSSFNRSNLRYQVLPKKGAS 774
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-----ESN--- 113
LD++ + R SGIIY S KEC+++ +++ G+R AYHA L ES
Sbjct: 775 TLDDIRSFIQTRAVTASGIIYCLSRKECDEVAQKMCAVGIRAVAYHAGLTDAARESRQKD 834
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG+IA CILYY
Sbjct: 835 WITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYN 894
Query: 164 LPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+ +L M+ ++ + NL+ IV YC + T CRRA YF E ++ +C
Sbjct: 895 YSDMLRLKKMMDADRALQYHVKKIHIDNLHRIVGYCENITDCRRAQQLDYFGEHFTSEQC 954
Query: 216 ----RGMCDHCRGGRRDAKRVDV 234
R CD+C +R K++D
Sbjct: 955 LENRRTACDNCL-KKRSFKQIDA 976
>gi|9945008|gb|AAG03075.1|AF294728_1 Sgs1p [Candida albicans]
Length = 1189
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 111/201 (55%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++++K + +CL E+ D + RF +SGIIY S + CE +L GL+ S YHA
Sbjct: 663 FYEIKLK---KSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHA 719
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ ++ +IAFG+GIDKP+VRFVIH L +++E +YQE+GRAG
Sbjct: 720 GMSADKRFNIQKRWQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAG 779
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
DG + C++YY D L +++ +++ LA L ++ YC + T CRR +
Sbjct: 780 HDGNFSECVMYYCYKDARSLQNLIQRDEELSESGRESHLAKLRQVIQYCENTTDCRRKQV 839
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
YF+E + C CD+CR
Sbjct: 840 LQYFNETFDPANCHKQCDNCR 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV +IAFG+GIDKP+VRFVIH L +++E +YQ
Sbjct: 733 WQENKIQVICATIAFGMGIDKPDVRFVIHLYLPRTLEGYYQ 773
>gi|261289349|ref|XP_002603118.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
gi|229288434|gb|EEN59129.1| hypothetical protein BRAFLDRAFT_198907 [Branchiostoma floridae]
Length = 666
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 126/252 (50%), Gaps = 39/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFY---------QVRIKPAAQKD 61
L + R SF V + P VR I H L + ++ + P K
Sbjct: 171 LCVLRKSFPGVPMMALTATATPRVRRDILHQLGMTDPRWFVQSFNRTNLHYSVMPKKVKS 230
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
E+ +L++ RFR+++GI+Y S KECE + +EL G AYHA +
Sbjct: 231 ATKEVLELINSRFRSKTGIVYCLSRKECETVSDELCRNGTSACAYHAGMSDKERARIQDL 290
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+IAFG+GIDKP+VRFVIH+ L KS+E +YQESGRAGRDG+ + CIL+Y
Sbjct: 291 WPEHYKVICATIAFGMGIDKPDVRFVIHYSLPKSVEGYYQESGRAGRDGEASDCILFYNY 350
Query: 165 PDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC- 215
D ++ ++ ++ + NL +V YC +++ CRRA + YF E + E
Sbjct: 351 HDKMRMQKLIHMDKEATYESRKVHMDNLLRMVQYCENESDCRRAQLLHYFGETDFNPELC 410
Query: 216 ----RGMCDHCR 223
R CD+C+
Sbjct: 411 TSDPRTTCDNCK 422
>gi|378733670|gb|EHY60129.1| bloom syndrome protein [Exophiala dermatitidis NIH/UT8656]
Length = 1681
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 87/251 (34%), Positives = 123/251 (49%), Gaps = 42/251 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN-------------FYQVRIKPA 57
L +R+ F V + NV+F + L MEN Y+VR K
Sbjct: 983 LGEFRSRFNAVPVMALTATATENVKFDVMQVLG--MENCEVFTQSFNRPNLTYEVRPK-G 1039
Query: 58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN--- 113
+ LD +ADL+ + Q+GI+Y S K CE + +LR + YHA + S
Sbjct: 1040 KGRAVLDSIADLIKSTYDGQAGIVYCLSRKNCESVATQLRKEYHIEAQHYHAGIPSGKRI 1099
Query: 114 ---------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC 158
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG + C
Sbjct: 1100 EIQQKWQEGEFNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAGRDGNQSGC 1159
Query: 159 ILYYRLPDVFKLSSMVFD-----QQTGLAN--LYNIVSYCLDQTRCRRAIIASYFDEAWS 211
LYY D L M+ + QQ L N+V +C +++ CRR + YF+E +
Sbjct: 1160 YLYYGYGDTASLKHMIENGDGSPQQKEHQKQLLRNVVQFCENRSDCRRLQVLDYFNERFD 1219
Query: 212 DTECRGMCDHC 222
+CR CD+C
Sbjct: 1220 PRDCRNGCDNC 1230
>gi|194744401|ref|XP_001954683.1| GF16620 [Drosophila ananassae]
gi|190627720|gb|EDV43244.1| GF16620 [Drosophila ananassae]
Length = 1512
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 125/252 (49%), Gaps = 41/252 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVI------HHC---LSKSMENFYQVRIKPAAQKD 61
L + + F V P VR I HC LS + + ++ P
Sbjct: 836 LGILKKRFPNVPTIALTATATPRVRLDILAQLNLKHCKWFLSSFNRSNLRYKVMPKKGAS 895
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
LD+++ + + + SGIIY S KEC+D+ +++ G+R AYHA L N
Sbjct: 896 TLDDISGYIRSKPAHSSGIIYCLSRKECDDVAKKMCKDGVRAVAYHAGLTDNERETRQKD 955
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFV+H+ L KS+E FYQE+GRAGRDG++A CILYY
Sbjct: 956 WLTGKLRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGFYQEAGRAGRDGEVADCILYYN 1015
Query: 164 LPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
D+ ++ M+ D L NL IV YC + CRRA YF E ++ +
Sbjct: 1016 YADMLRIKKML-DADKALQYNVKKMHIDNLNRIVGYCENLMDCRRAQQLDYFGEHFTSEQ 1074
Query: 215 C----RGMCDHC 222
C + CD+C
Sbjct: 1075 CLENRQTACDNC 1086
>gi|189200787|ref|XP_001936730.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983829|gb|EDU49317.1| ATP-dependent DNA helicase hus2/rqh1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1420
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/189 (39%), Positives = 108/189 (57%), Gaps = 25/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ +D +ADL+ ++ +SGIIY S K CE + ++L G+R YHA ++S
Sbjct: 730 RGVIDSIADLIKEKYTGKSGIIYCLSRKTCEQVAQKLSETGIRAYHYHAGMDSADRSDVQ 789
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK +VR+VIHH L KS+E +YQE+GRAGRDG+ + C LY
Sbjct: 790 RKWQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQETGRAGRDGKRSECYLY 849
Query: 162 YRLPDVFKLSSMV------FDQQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
Y D L M+ +Q+ L + L +V YC ++ CRRA + YF EA+ ++
Sbjct: 850 YLYADSRILRKMIDEGEGSREQKQRLNDMLRTVVQYCENKADCRRAQVLGYFSEAFDASK 909
Query: 215 CRGMCDHCR 223
C CD+CR
Sbjct: 910 CNNTCDNCR 918
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Y V +IAFG+GIDK +VR+VIHH L KS+E +YQ
Sbjct: 792 WQKNEYHVIVATIAFGMGIDKADVRYVIHHSLPKSLEGYYQ 832
>gi|448524540|ref|XP_003871523.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis Co 90-125]
gi|380353345|emb|CCG26101.1| Sgs1 RecQ-related DNA helicase [Candida orthopsilosis]
Length = 1068
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 115/202 (56%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K + L+ + D + R++N+ GIIY S + CE +L + GL+ S YHA
Sbjct: 751 YYEIRWKSG---NYLESMKDYILSRYKNKCGIIYCHSKQSCEQTSAKLNSFGLKTSFYHA 807
Query: 109 --------KLESN----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K+++N +IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAG
Sbjct: 808 GMTPEDRFKIQTNWQKNKIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 867
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CI+YY D L +M+ ++ LA L +V YC + T CRR +
Sbjct: 868 RDGKPSECIMYYCYKDARSLQNMIHRDADLTEEGKENHLAKLRQVVQYCENTTDCRRKQV 927
Query: 203 ASYFDEAWSDTECRGMCDHCRG 224
YF+E ++ C+ CD+C+
Sbjct: 928 LHYFNETFNPINCKKQCDNCKN 949
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Q+ +IAFG+GIDKP+VRFVIH + +S+E +YQ
Sbjct: 821 WQKNKIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQ 861
>gi|452978196|gb|EME77960.1| hypothetical protein MYCFIDRAFT_216933 [Pseudocercospora fijiensis
CIRAD86]
Length = 1607
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 76/202 (37%), Positives = 108/202 (53%), Gaps = 27/202 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYHA 108
Y V KP ++D + +A+++ + +GIIY S K CED+ L N ++ YHA
Sbjct: 909 YSVLPKPKGKQD-VQSMAEVIKKDHAKDTGIIYCLSRKNCEDIAAALVNEHRIKAKHYHA 967
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDK NVRFVIHH + KS+E +YQE+GRAG
Sbjct: 968 GMDSIAKADVQKEWQAGHVHVIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYYQETGRAG 1027
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIA 203
RDG+ + C LYY D KL M+ D + L +V YC +++ CRR +
Sbjct: 1028 RDGKPSACYLYYGYGDAGKLRKMIDDGEGNWDQKDRQHQMLSKMVQYCENKSDCRRVQVL 1087
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
YF EA+ +C G CD+C G
Sbjct: 1088 GYFGEAFEPEDCLGGCDNCTSG 1109
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ V +IAFG+GIDK NVRFVIHH + KS+E +YQ
Sbjct: 981 WQAGHVHVIVATIAFGMGIDKSNVRFVIHHSIPKSLEGYYQ 1021
>gi|449304030|gb|EMD00038.1| hypothetical protein BAUCODRAFT_63664, partial [Baudoinia
compniacensis UAMH 10762]
Length = 533
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 113/201 (56%), Gaps = 27/201 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL-RNRGLRVSAYH 107
+Y+VR K + KD L+ +A L+ R R QSGIIY S K CED+ +L + ++ + YH
Sbjct: 235 YYEVRPKESKGKD-LESIATLIKERHRGQSGIIYCLSRKNCEDMAADLVKQHKVKAAHYH 293
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L S +IAFG+GIDK +VRFVIH+ + KS+E +YQE+GRA
Sbjct: 294 AGLTSEQRSKAQKQWQSGTYHVIVATIAFGMGIDKADVRFVIHNSIPKSLEGYYQETGRA 353
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAII 202
GRDG+ + C L+Y D KL M+ D + L +V +C +++ CRR +
Sbjct: 354 GRDGKHSGCYLFYGYSDAGKLRRMIDDGEGSHEQKDRQHQMLRKMVQFCENRSDCRRVQV 413
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF E + EC+ CD+C+
Sbjct: 414 LAYFSEVFHQDECQNQCDNCK 434
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ Y V +IAFG+GIDK +VRFVIH+ + KS+E +YQ
Sbjct: 308 WQSGTYHVIVATIAFGMGIDKADVRFVIHNSIPKSLEGYYQ 348
>gi|354548256|emb|CCE44993.1| hypothetical protein CPAR2_407960 [Candida parapsilosis]
Length = 1080
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K + L+ + D + R++N+ GIIY S + CE +L + GL+ S YHA
Sbjct: 762 YYEIRWKSG---NYLESMKDYILSRYKNKCGIIYCHSKQSCEQTSAKLNSFGLKTSFYHA 818
Query: 109 --------KLESN----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K+++N +IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAG
Sbjct: 819 GMSPEDRFKIQTNWQKNKIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 878
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CI+YY D L +M+ ++ LA L +V YC + T CRR +
Sbjct: 879 RDGKPSECIMYYCYKDARSLQNMIHRDADLTEEGKENHLAKLRQVVQYCENTTDCRRKQV 938
Query: 203 ASYFDEAWSDTECRGMCDHCRG 224
YF+E + C+ CD+C+
Sbjct: 939 LHYFNETFDPINCKKQCDNCKN 960
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + Q+ +IAFG+GIDKP+VRFVIH + +S+E +YQ
Sbjct: 832 WQKNKIQLICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQ 872
>gi|358367182|dbj|GAA83801.1| RecQ family helicase MusN [Aspergillus kawachii IFO 4308]
Length = 1549
Score = 139 bits (351), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VRIK + L +AD + + N+SGI+Y S K CE + LR+ ++ YHA
Sbjct: 918 YEVRIKKKGT-EVLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHA 976
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 977 GMDSGERAKIQQAWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1036
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LYY D +SSM+ D+ G L+N+V YC +++ CRR I
Sbjct: 1037 RDGKRSGCYLYYCYKDTSTISSMI-DKGEGSKQQKNRQRQMLHNVVQYCENRSDCRRVQI 1095
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1096 LAYFNEYFRRQDCNASCDNCK 1116
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
RT +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 994 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1030
>gi|323303418|gb|EGA57213.1| Sgs1p [Saccharomyces cerevisiae FostersB]
Length = 1423
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|326431575|gb|EGD77145.1| RecQ5 [Salpingoeca sp. ATCC 50818]
Length = 1451
Score = 139 bits (350), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 112/203 (55%), Gaps = 26/203 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K ++ K C++E+ + RFRN+ GI+Y S KECE + + L G + YHA
Sbjct: 916 FYEVRKK-SSYKKCVEEIGKEIRTRFRNKCGIVYCLSRKECETVSQALNQSGHKSLFYHA 974
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFV H L KSME +YQE+GRAG
Sbjct: 975 GMDPADREAYQDQWQSGKVNIMCATIAFGMGIDKPDVRFVFHFSLPKSMEGYYQEAGRAG 1034
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ A C+LYY D K ++ ++Q + +NL +V YC + CRR
Sbjct: 1035 RDGKPAVCVLYYNYGDKAKHMRLIDIGEGSYEQKEQHRSNLNQVVQYCENFQDCRRVQQL 1094
Query: 204 SYFDEAWSDTECRGMCDHCRGGR 226
+YF E + +CR CD C+ R
Sbjct: 1095 AYFGEDFDKRDCRNNCDVCKSRR 1117
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/46 (52%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 9 AYLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
AY + W++ + +IAFG+GIDKP+VRFV H L KSME +YQ
Sbjct: 983 AYQDQWQSGKVNIMCATIAFGMGIDKPDVRFVFHFSLPKSMEGYYQ 1028
>gi|403216335|emb|CCK70832.1| hypothetical protein KNAG_0F01640 [Kazachstania naganishii CBS 8797]
Length = 1373
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ K K+ + E+ D + R+FRNQ+GIIY S CE +L+ ++ + YHA
Sbjct: 819 FYEVKKK---SKNTIYEICDEIKRKFRNQTGIIYCHSKNSCEQTATQLQRNRIKCAYYHA 875
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 876 GLEPEERFKIQKSWQTDEIQVICATVAFGMGIDKPDVRFVYHFTIPRTLEGYYQETGRAG 935
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ ++C Y+ D+ + +M+ +++ LA L ++ YC + T CRR ++
Sbjct: 936 RDGKYSYCTTYFSFRDIRNMQTMIQKDENLDRENKEKHLAKLQQVLGYCDNMTDCRRKLV 995
Query: 203 ASYFDEAWSDTECRGMCDHCRG 224
SYF+E + C CD+C+
Sbjct: 996 LSYFNEDFDAALCHKNCDNCKN 1017
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 889 WQTDEIQVICATVAFGMGIDKPDVRFVYHFTIPRTLEGYYQ 929
>gi|323307639|gb|EGA60904.1| Sgs1p [Saccharomyces cerevisiae FostersO]
Length = 1396
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|71017581|ref|XP_759021.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
gi|46098743|gb|EAK83976.1| hypothetical protein UM02874.1 [Ustilago maydis 521]
Length = 1291
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 114/199 (57%), Gaps = 28/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
YQVR KP ++ +DE+A + +++ GI+Y S + CE + ++L+ G+ YHAK
Sbjct: 616 YQVRKKPKSK--LIDEIASFILTSHKDECGIVYCFSRESCETVADDLKKHGITAHHYHAK 673
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAGR
Sbjct: 674 LGKDDRSKVQQRWKNGEYKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGR 733
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQT-------GLANLYNIVSYCLDQTRCRRAIIAS 204
DG + CILYY DV ++ +M+ ++ + +L + +C ++ CRR +
Sbjct: 734 DGLDSVCILYYSWTDVRRMENMMLSEEKSQEAIDRSIDSLREMQRFCENEIECRRVQVLR 793
Query: 205 YFDEA-WSDTECRGMCDHC 222
YF E+ ++ +CR CD+C
Sbjct: 794 YFGESGFTSEQCRSTCDNC 812
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 39/56 (69%), Gaps = 5/56 (8%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDEL 66
W+ Y+V +IAFG+GIDKP+VRFVIHH L KS+E +YQ + A +D LD +
Sbjct: 686 WKNGEYKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGR--AGRDGLDSV 739
>gi|256271606|gb|EEU06648.1| Sgs1p [Saccharomyces cerevisiae JAY291]
Length = 1447
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|392297356|gb|EIW08456.1| Sgs1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1341
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 770 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 826
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 827 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 886
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 887 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 946
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 947 LSYFNEDFDSKLCHKNCDNCRNS 969
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 840 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 880
>gi|259148775|emb|CAY82020.1| Sgs1p [Saccharomyces cerevisiae EC1118]
Length = 1447
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|6323844|ref|NP_013915.1| Sgs1p [Saccharomyces cerevisiae S288c]
gi|464912|sp|P35187.1|SGS1_YEAST RecName: Full=ATP-dependent helicase SGS1; AltName: Full=Helicase
TPS1
gi|349194|gb|AAA35167.1| bps. 390..881 = homology to E.coli recQ; bps. 414..430 = ATP binding
site [Saccharomyces cerevisiae]
gi|642282|emb|CAA87811.1| Tps1p [Saccharomyces cerevisiae]
gi|726279|gb|AAB60289.1| Sgs1p [Saccharomyces cerevisiae]
gi|285814193|tpg|DAA10088.1| TPA: Sgs1p [Saccharomyces cerevisiae S288c]
Length = 1447
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|365763903|gb|EHN05429.1| Sgs1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1314
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|151945893|gb|EDN64125.1| Nucleolar DNA helicase of the RecQ family involved in maintenance of
genome integrity [Saccharomyces cerevisiae YJM789]
Length = 1447
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|367009466|ref|XP_003679234.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
gi|359746891|emb|CCE90023.1| hypothetical protein TDEL_0A06910 [Torulaspora delbrueckii]
Length = 1364
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 115/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++ K K+ + E+ D + RFRNQ+GIIY S CE +++ G++ + YHA
Sbjct: 807 FYEILKK---TKNSIFEICDTIKIRFRNQTGIIYCHSKNSCEQTAAQMQRSGIKCAFYHA 863
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 864 GMEPDDRLTIQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 923
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ ++C+ Y+ DV + +M+ +++ L L ++SYC ++T CRR ++
Sbjct: 924 RDGKFSYCMAYFSFRDVRTIQTMIQKDKNLDRENKEKHLNKLQQVMSYCDNETDCRRKLV 983
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 984 LSYFNEDFDSKLCGKNCDNCRNS 1006
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 877 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 917
>gi|349580478|dbj|GAA25638.1| K7_Sgs1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1447
Score = 139 bits (350), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|323336083|gb|EGA77356.1| Sgs1p [Saccharomyces cerevisiae Vin13]
Length = 1447
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|190408415|gb|EDV11680.1| ATP-dependent helicase SGS1 [Saccharomyces cerevisiae RM11-1a]
Length = 1447
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 114/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + E+ D + RF+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 876 YYEVNKK---TKNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 933 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 992
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 993 RDGNYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1052
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1053 LSYFNEDFDSKLCHKNCDNCRNS 1075
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 946 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 986
>gi|367001388|ref|XP_003685429.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
gi|357523727|emb|CCE62995.1| hypothetical protein TPHA_0D03600 [Tetrapisispora phaffii CBS 4417]
Length = 1280
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 76/230 (33%), Positives = 122/230 (53%), Gaps = 33/230 (14%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q+ I LG+ P ++ +++ + Y +R K K+ ++E+ + F+NQSG
Sbjct: 719 QLDIINNLGVRNP---LLLKQSFNRTNLD-YIIRTK---SKNTVNEICSSLKTDFKNQSG 771
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLG 121
IIY S CE + +++ ++ +R + YHA + + ++AFG+G
Sbjct: 772 IIYCNSKISCEQVAQQIASQKIRTAFYHAGMTPSERLKIQKAWQNNQVQVICATVAFGMG 831
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQT-- 179
IDKP+VRFVIH + +++E +YQE+GRAGRDG A CI Y+ DV L +M+ ++
Sbjct: 832 IDKPDVRFVIHFTIPRTLEGYYQETGRAGRDGLPAQCITYFSFKDVRSLQTMIQRDKSLN 891
Query: 180 ------GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
L L +VSYC + T CRR + YF+E + C CD+CR
Sbjct: 892 KENKLKHLEKLQQVVSYCDNVTTCRRQQVLKYFNEDIDPSVCLKQCDNCR 941
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV ++AFG+GIDKP+VRFVIH + +++E +YQ
Sbjct: 814 WQNNQVQVICATVAFGMGIDKPDVRFVIHFTIPRTLEGYYQ 854
>gi|350631262|gb|EHA19633.1| RecQ family helicase MusN [Aspergillus niger ATCC 1015]
Length = 1452
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VRIK + L +AD + + N+SGI+Y S K CE + LR+ ++ YHA
Sbjct: 835 YEVRIKKKG-TELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHA 893
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 894 GMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 953
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LYY D +SSM+ D+ G L+N+V YC +++ CRR I
Sbjct: 954 RDGKRSGCYLYYCYKDTSTISSMI-DKGEGSKQQKNRQRQMLHNVVQYCENRSDCRRVQI 1012
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1013 LAYFNEYFRRQDCNASCDNCK 1033
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
RT +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 911 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 947
>gi|401626200|gb|EJS44156.1| sgs1p [Saccharomyces arboricola H-6]
Length = 1463
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 68/203 (33%), Positives = 115/203 (56%), Gaps = 29/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V+ K K+ + E+ D + F+NQ+GIIY S K CE +++ G++ + YHA
Sbjct: 889 YYEVKKK---TKNTIFEICDAVKSNFKNQTGIIYCHSKKSCEQTSAQMQKNGIKCAYYHA 945
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 946 GMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAG 1005
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ ++CI Y+ D+ + +M+ +++ L L +++YC + T CRR ++
Sbjct: 1006 RDGKYSYCITYFSFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLV 1065
Query: 203 ASYFDEAWSDTECRGMCDHCRGG 225
SYF+E + C CD+CR
Sbjct: 1066 LSYFNEDFDSKLCHKNCDNCRNS 1088
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 959 WQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQ 999
>gi|374375555|ref|ZP_09633213.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
gi|373232395|gb|EHP52190.1| ATP-dependent DNA helicase RecQ [Niabella soli DSM 19437]
Length = 751
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 81/204 (39%), Positives = 114/204 (55%), Gaps = 26/204 (12%)
Query: 43 SKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLR 102
S + +N Y I P K +E + +N+SGIIYT + K E+L + L G++
Sbjct: 224 SFNRDNLY-YEIVPKVSKKQTNESMVRFIKGMKNKSGIIYTLNRKTTEELADILMANGIK 282
Query: 103 VSAYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
AYHA L+S + +IAFG+GIDKP++RFVIH+ +SKS+EN+YQ
Sbjct: 283 AVAYHAGLDSKLRAERQDQFLNEDVQVIVATIAFGMGIDKPDIRFVIHYNISKSIENYYQ 342
Query: 145 ESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRR 199
E+GRAGRDG C+LYY DV KL ++ D+ + G A L N + CRR
Sbjct: 343 ETGRAGRDGLEGKCLLYYSHKDVSKLEHLMRDKPLSEREVG-AQLINETVAFAESGVCRR 401
Query: 200 AIIASYFDEAWSDTECRGMCDHCR 223
+I SYF E ++ C G+CD+CR
Sbjct: 402 KVILSYFGEQYTVENC-GLCDNCR 424
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 29/30 (96%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP++RFVIH+ +SKS+EN+YQ
Sbjct: 313 TIAFGMGIDKPDIRFVIHYNISKSIENYYQ 342
>gi|317032832|ref|XP_001394458.2| recQ family helicase MusN [Aspergillus niger CBS 513.88]
Length = 1460
Score = 138 bits (348), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VRIK + L +AD + + N+SGI+Y S K CE + LR+ ++ YHA
Sbjct: 829 YEVRIKKKGT-ELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHA 887
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 888 GMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 947
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LYY D +SSM+ D+ G L+N+V YC +++ CRR I
Sbjct: 948 RDGKRSGCYLYYCYKDTSTISSMI-DKGEGSKQQKNRQRQMLHNVVQYCENRSDCRRVQI 1006
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1007 FAYFNEYFRRQDCNASCDNCK 1027
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
RT +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 905 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 941
>gi|134079141|emb|CAK45953.1| unnamed protein product [Aspergillus niger]
Length = 1548
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 114/201 (56%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VRIK + L +AD + + N+SGI+Y S K CE + LR+ ++ YHA
Sbjct: 917 YEVRIKKKG-TELLASIADTIKTSYANKSGIVYCLSRKTCEKVASGLRDDYRIKAEHYHA 975
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 976 GMDSAERAKIQQDWQAGRTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1035
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LYY D +SSM+ D+ G L+N+V YC +++ CRR I
Sbjct: 1036 RDGKRSGCYLYYCYKDTSTISSMI-DKGEGSKQQKNRQRQMLHNVVQYCENRSDCRRVQI 1094
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1095 FAYFNEYFRRQDCNASCDNCK 1115
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
RT +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 993 RTHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1029
>gi|346322515|gb|EGX92114.1| RecQ family helicase MusN [Cordyceps militaris CM01]
Length = 1700
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 76/203 (37%), Positives = 111/203 (54%), Gaps = 26/203 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K A ++ +ADL+ + +GI+Y S K E++ ++L G+ YHA
Sbjct: 1019 FYEVRPKGTAASS-IETIADLIHSHYAGLTGIVYALSRKGTENVAKKLGEAGISAYHYHA 1077
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 1078 GMTPPEKVSVQKKWQKGDVKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAG 1137
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-----QQTG--LANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL Y D+ L M+ D QQ + L + S+C +Q CRR +
Sbjct: 1138 RDGKPSDCILLYGKRDITVLKKMITDGEGNQQQKDRQMEMLNRVASFCDNQWDCRRTEVL 1197
Query: 204 SYFDEAWSDTECRGMCDHCRGGR 226
YF E +S +C+ CD+C+ G+
Sbjct: 1198 RYFGEDFSAAQCQKNCDNCQSGK 1220
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 1102 TIAFGMGIDKPDVRFVIHHGLPKSLEGYYQ 1131
>gi|425778070|gb|EKV16215.1| RecQ family helicase MusN [Penicillium digitatum Pd1]
gi|425780607|gb|EKV18613.1| RecQ family helicase MusN [Penicillium digitatum PHI26]
Length = 1426
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 27/202 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L +A+ +S +RNQ GIIY S K CE E+LR + L+ AYHA
Sbjct: 775 YEVRSK-GKNDEVLASMAETISSSYRNQCGIIYCLSRKTCEKTAEDLRTKYRLKAQAYHA 833
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDK +VRFV+HH + KS+E +YQE+GRAG
Sbjct: 834 GMSATAKTEAQRNWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAG 893
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-----FDQQTGLAN--LYNIVSYCLDQTRCRRAIIA 203
RDG+ + C LY+ D L M+ QQ G L N+V +C +++ CRR +
Sbjct: 894 RDGKRSGCYLYFGYKDTATLKRMIDAGDGNGQQKGRQKQMLRNVVQFCENRSDCRRVQVL 953
Query: 204 SYFDEAWSDTECRGMCDHCRGG 225
+YF E + +C CD+C+ G
Sbjct: 954 AYFAEYFRQEDCNNTCDNCKSG 975
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 1 MFALLYTIAYLN--LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
M A T A N + R +IAFG+GIDK +VRFV+HH + KS+E +YQ
Sbjct: 835 MSATAKTEAQRNWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQ 887
>gi|343961323|dbj|BAK62251.1| ATP-dependent DNA helicase Q1 [Pan troglodytes]
Length = 274
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 59/103 (57%), Positives = 76/103 (73%)
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQT 179
+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD A CILYY D+F++SSMV +
Sbjct: 1 MGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMVVMENV 60
Query: 180 GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
G LY +VSYC + ++CRR ++A +FD W+ C MCD+C
Sbjct: 61 GQQKLYEMVSYCQNISKCRRVLMAQHFDGVWNSEACNKMCDNC 103
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/25 (80%), Positives = 24/25 (96%)
Query: 27 LGIDKPNVRFVIHHCLSKSMENFYQ 51
+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct: 1 MGIDKPDVRFVIHHSMSKSMENYYQ 25
>gi|424842508|ref|ZP_18267133.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
gi|395320706|gb|EJF53627.1| ATP-dependent DNA helicase RecQ [Saprospira grandis DSM 2844]
Length = 737
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 27/200 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ K ++D L + + + N+SGIIY + K E++ + L ++ + YHA
Sbjct: 213 FYEVQPK-GKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVNDIKAAPYHA 271
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE+ + +IAFG+GIDKP+VRFVIH+ + KS+EN+YQE+GRAG
Sbjct: 272 GLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQETGRAG 331
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDGQ AHC+ +Y D+ +L + D+ + G L +++Y + T CRR + Y
Sbjct: 332 RDGQHAHCLTFYSYKDILRLEKFLRDKPVAEREMGAQLLAEMIAYA-ETTACRRRFLLHY 390
Query: 206 FDEAWSDTECR--GMCDHCR 223
F E + D CR MCD+C+
Sbjct: 391 FGEKYKDEVCRRDQMCDNCK 410
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+EN+YQ
Sbjct: 296 TIAFGMGIDKPDVRFVIHYDIPKSIENYYQ 325
>gi|242764771|ref|XP_002340840.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
gi|218724036|gb|EED23453.1| RecQ family helicase MusN [Talaromyces stipitatus ATCC 10500]
Length = 1574
Score = 137 bits (346), Expect = 2e-30, Method: Composition-based stats.
Identities = 71/202 (35%), Positives = 114/202 (56%), Gaps = 30/202 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--YH 107
Y V K + D + ++AD++ ++ ++GI+Y S K+CE + +EL ++G ++ A YH
Sbjct: 907 YDVLPKKGSAPDIISQIADIIQTSYKRKAGIVYCLSRKDCEKVAQEL-SKGYKIKATHYH 965
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRA
Sbjct: 966 AGMASAERTAVQRDWQSGKYDVIVATIAFGMGIDKPDVRFVIHHTMPKSLEGYYQETGRA 1025
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAI 201
GRDG+ + C L+Y D + +Q G L ++V +C +Q+ CRR
Sbjct: 1026 GRDGKRSGCYLFYSYRDTAAQKRFI-EQSDGDWQQKNRQRQMLRHVVQFCENQSDCRRVQ 1084
Query: 202 IASYFDEAWSDTECRGMCDHCR 223
I +YF+E++ +C CD+C+
Sbjct: 1085 ILAYFNESFRAGDCHRTCDNCK 1106
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ Y V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 980 WQSGKYDVIVATIAFGMGIDKPDVRFVIHHTMPKSLEGYYQ 1020
>gi|379729697|ref|YP_005321893.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
gi|378575308|gb|AFC24309.1| ATP-dependent DNA helicase RecQ [Saprospira grandis str. Lewin]
Length = 737
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 114/200 (57%), Gaps = 27/200 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V+ K ++D L + + + N+SGIIY + K E++ + L ++ + YHA
Sbjct: 213 FYEVQPK-GKKEDVLRRIVQFIKDKAPNESGIIYVQNRKTTEEVAKVLSVNDIKAAPYHA 271
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE+ + +IAFG+GIDKP+VRFVIH+ + KS+EN+YQE+GRAG
Sbjct: 272 GLEAKLRSDTQDAFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSIENYYQETGRAG 331
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDGQ AHC+ +Y D+ +L + D+ + G L +++Y + T CRR + Y
Sbjct: 332 RDGQHAHCLTFYSYKDILRLEKFLRDKPVAEREMGAQLLAEMIAYA-ETTACRRRFLLHY 390
Query: 206 FDEAWSDTECR--GMCDHCR 223
F E + D CR MCD+C+
Sbjct: 391 FGEKYKDEVCRRDQMCDNCK 410
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+EN+YQ
Sbjct: 296 TIAFGMGIDKPDVRFVIHYDIPKSIENYYQ 325
>gi|195112008|ref|XP_002000568.1| GI22449 [Drosophila mojavensis]
gi|193917162|gb|EDW16029.1| GI22449 [Drosophila mojavensis]
Length = 1409
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 131/263 (49%), Gaps = 40/263 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVR------FVIHHC---LSKSMENFYQVRIKPAAQKD 61
L + R F V P VR + HC LS + ++ P
Sbjct: 797 LGILRKRFPNVPTMALTATATPRVRQDILQQLNLTHCKWFLSSFNRRNLRYQVLPKKGVS 856
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------- 114
LD++ + + R SGIIY S KEC+++ +++ G+R +YHA L V
Sbjct: 857 TLDDMRNFIQSRPATASGIIYCLSRKECDEVAKKMCAVGIRALSYHAGLTDVVRESRQKD 916
Query: 115 -----------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG+IA CILYY
Sbjct: 917 WITNKVRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGEIADCILYYN 976
Query: 164 LPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+ +L M+ ++ + NL IV YC + T CRRA YF E ++ +C
Sbjct: 977 YSDMQRLKKMMDADRALQYHVKKIHIENLNRIVGYCENITDCRRAQQLDYFGEHFTSEQC 1036
Query: 216 ----RGMCDHCRGGRRDAKRVDV 234
R CD+C +R K++D
Sbjct: 1037 LEDRRTACDNCL-KKRTYKQIDA 1058
>gi|400595361|gb|EJP63166.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 1678
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 112/203 (55%), Gaps = 26/203 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + ++ +A+L+ ++ +GI+Y S E L E+LR + + YHA
Sbjct: 1008 YYEVRSK-GSPVSAVETIAELIHSKYAGLTGIVYALSRAGTEKLAEKLRKQRISAQHYHA 1066
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 1067 GMTAPDKVSVQTRWQQGAVKVVVATIAFGMGIDKPDVRFVIHHGLPKSLEGYYQETGRAG 1126
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ + CIL Y D+ L M+ D ++ + L + ++C ++ CRR +
Sbjct: 1127 RDGKPSDCILLYARRDIAVLRKMITDGEGNAEQKERQMQMLNQVAAFCDNEWDCRRTEVL 1186
Query: 204 SYFDEAWSDTECRGMCDHCRGGR 226
YF E +S +CR CD+C+ G+
Sbjct: 1187 RYFGEEFSAAQCRKNCDNCQSGK 1209
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 1091 TIAFGMGIDKPDVRFVIHHGLPKSLEGYYQ 1120
>gi|343429696|emb|CBQ73268.1| related to SGS1-DNA helicase [Sporisorium reilianum SRZ2]
Length = 1258
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 110/199 (55%), Gaps = 28/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
YQVR KP ++ +D++A + +++ GI+Y S + CE + +L G+ YHA+
Sbjct: 551 YQVRSKPRSK--AVDDIASFILASHKDECGIVYCLSRETCETVAADLIKHGISAHHYHAR 608
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L+ + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAGR
Sbjct: 609 LQKDDRAMVQDKWQSNEFKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAGR 668
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAIIA 203
DG+ + CILYY DV K+ MV ++ L +L + +C + CRR +
Sbjct: 669 DGKSSACILYYSYGDVLKIEKMVRGEEDKSQDAIDRSLDSLRMMQMFCENVIECRRVQVL 728
Query: 204 SYFDEAWSDTECRGMCDHC 222
YF E +S +C CD+C
Sbjct: 729 RYFGEDFSADQCHSTCDNC 747
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 34/41 (82%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+++ ++V +IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 621 WQSNEFKVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 661
>gi|345494123|ref|XP_001606008.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1223
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 125/253 (49%), Gaps = 39/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKS-----MENFYQVRIK----PAAQKD 61
L + R + V P VR I H L M +F + ++ K+
Sbjct: 631 LQVLRVKYPNVPTMALTATATPRVRTDILHQLGMQSPKWFMSSFNRPNLRYSVISKKGKN 690
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
DE+ L+ +F++ GI+Y S +C+ E+++ G++ YHA L
Sbjct: 691 ASDEVIGLIKAKFKDDCGIVYCLSRNDCDTYAEQMKINGIKAMGYHAGLSDKQRSDIQGR 750
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKPNVRFVIH L KS+E +YQESGRAGRD + A CIL+Y
Sbjct: 751 WISEQIKVVCATIAFGMGIDKPNVRFVIHASLPKSIEGYYQESGRAGRDSENAECILFYN 810
Query: 164 LPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D+++ M+ Q+T + NL+ +V++C + T CRRA+ +YF E + C
Sbjct: 811 YADMYRHRKMIEMDVASNKTAQKTHMDNLFKMVTFCENTTDCRRALQLNYFGELFDREIC 870
Query: 216 ----RGMCDHCRG 224
+ CD+CR
Sbjct: 871 IANKQTACDNCRN 883
>gi|225563190|gb|EEH11469.1| RecQ family helicase MusN [Ajellomyces capsulatus G186AR]
Length = 1559
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 40/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ + E F Y+VR KP
Sbjct: 839 LGNTRTRFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKG- 897
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN----- 113
+ +D +A+ + + Q+GIIY S + CE + E+LR + + YHA L +
Sbjct: 898 TNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISI 957
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 958 QTDWQSGKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYL 1017
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + +M+ D+ G L ++V +C +++ CRR I +YF+E +
Sbjct: 1018 YYGFQDTATIRNMI-DKGEGSNEQKSRQRQMLRHVVQFCENRSDCRRVQILAYFNEKFKK 1076
Query: 213 TECRGMCDHCRGG 225
C CD+C+ G
Sbjct: 1077 ENCNRSCDNCKAG 1089
>gi|269859903|ref|XP_002649675.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066870|gb|EED44340.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 28/196 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD + ++ + + GIIY TS KECE + EEL +R L+++ YH L
Sbjct: 474 RVLPKTATTILD-IVSFINSHYADSPGIIYCTSKKECEKMAEEL-SRDLKITYYHGGLSK 531
Query: 113 ---------------NV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
N+ ++AFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG
Sbjct: 532 YDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGL 591
Query: 155 IAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
+ CILYY D ++ ++ +Q L+N+V YC ++ CRR + YF
Sbjct: 592 ESICILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVKYCENKVECRRKQVLKYF 651
Query: 207 DEAWSDTECRGMCDHC 222
+E +S C CD+C
Sbjct: 652 NEEFSSDMCNKTCDNC 667
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Y + ++AFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 541 WNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQ 581
>gi|269861548|ref|XP_002650477.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
gi|220066069|gb|EED43580.1| ATP-dependent DNA helicase recQ [Enterocytozoon bieneusi H348]
Length = 793
Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 108/196 (55%), Gaps = 28/196 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD + ++ + + GIIY TS KECE + EEL +R L+++ YH L
Sbjct: 474 RVLPKTATTILD-IVSFINSHYADSPGIIYCTSKKECEKMAEEL-SRDLKITYYHGGLSK 531
Query: 113 ---------------NV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
N+ ++AFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG
Sbjct: 532 YDRIRIQEQWNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQETGRAGRDGL 591
Query: 155 IAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
+ CILYY D ++ ++ +Q L+N+V YC ++ CRR + YF
Sbjct: 592 ESICILYYSYADTKVINFLITRSYNTTAEQKQRQKEELFNVVKYCENKVECRRKQVLKYF 651
Query: 207 DEAWSDTECRGMCDHC 222
+E +S C CD+C
Sbjct: 652 NEEFSSDMCNKTCDNC 667
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Y + ++AFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 541 WNNKTYNIIIATVAFGMGIDKPDVRFVIHYSLPKSLEGYYQ 581
>gi|154281633|ref|XP_001541629.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150411808|gb|EDN07196.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1557
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 40/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ + E F Y+VR KP
Sbjct: 839 LGNTRTRFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKG- 897
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN----- 113
+ +D +A+ + + Q+GIIY S + CE + E+LR + + YHA L +
Sbjct: 898 TNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISI 957
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 958 QTDWQSGKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYL 1017
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + +M+ D+ G L ++V +C +++ CRR I +YF+E +
Sbjct: 1018 YYGFQDTATIRNMI-DKGEGSNEQKSRQRQMLRHVVQFCENRSDCRRVQILAYFNEKFKK 1076
Query: 213 TECRGMCDHCRGG 225
C CD+C+ G
Sbjct: 1077 ENCNRSCDNCKAG 1089
>gi|325093139|gb|EGC46449.1| RecQ family helicase MusN [Ajellomyces capsulatus H88]
Length = 1559
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 40/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ + E F Y+VR KP
Sbjct: 839 LGNTRTRFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKG- 897
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN----- 113
+ +D +A+ + + Q+GIIY S + CE + E+LR + + YHA L +
Sbjct: 898 TNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISI 957
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 958 QTDWQSGKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYL 1017
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + +M+ D+ G L ++V +C +++ CRR I +YF+E +
Sbjct: 1018 YYGFQDTATIRNMI-DKGEGSNEQKSRQRQMLRHVVQFCENRSDCRRVQILAYFNEKFKK 1076
Query: 213 TECRGMCDHCRGG 225
C CD+C+ G
Sbjct: 1077 ENCNRSCDNCKAG 1089
>gi|240275770|gb|EER39283.1| RecQ family helicase MusN [Ajellomyces capsulatus H143]
Length = 1559
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 128/253 (50%), Gaps = 40/253 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ + E F Y+VR KP
Sbjct: 839 LGNTRTRFPGIPLMALTATATENVKVDVIHNLGMRDAEVFVQSFNRPNLIYEVRQKPKG- 897
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN----- 113
+ +D +A+ + + Q+GIIY S + CE + E+LR + + YHA L +
Sbjct: 898 TNVVDGIAETIKTSYNGQAGIIYCLSRQSCERVAEQLRETHKINAAHYHAGLPAEDRISI 957
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 958 QTDWQSGKCSVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGKRSGCYL 1017
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + +M+ D+ G L ++V +C +++ CRR I +YF+E +
Sbjct: 1018 YYGFQDTATIRNMI-DKGEGSNEQKSRQRQMLRHVVQFCENRSDCRRVQILAYFNEKFKK 1076
Query: 213 TECRGMCDHCRGG 225
C CD+C+ G
Sbjct: 1077 ENCNRSCDNCKAG 1089
>gi|320593232|gb|EFX05641.1| DNA/RNA helicase [Grosmannia clavigera kw1407]
Length = 1854
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/256 (33%), Positives = 128/256 (50%), Gaps = 41/256 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLS-----------KSMENFYQVRIKPAAQ 59
L R F V + PNV I H LS +Y++R K
Sbjct: 1091 LGEVRRRFPSVPVMALTATATPNVIVDIKHNLSIDGCKVFSQSFNRPNLYYEIREK---G 1147
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
K ++ +A+L+ ++ Q+GI+YT S K + ++LR++ G+ YHA + ++
Sbjct: 1148 KGAVENIAELIQSQYSGQTGIVYTLSQKSTVSIADKLRDKFGISAHHYHAGIPADEKTRI 1207
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAGRDG + C L
Sbjct: 1208 QRDWQKGRIKIVVATIAFGMGIDKPDVRFVIHHYLPKSLEGYYQETGRAGRDGIHSDCFL 1267
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y+ D+ L + D + A L +V +C ++ CRR+ I YF E + +
Sbjct: 1268 YFSYGDIKNLRKFIADSEGSEAQKARQREMLNRMVDFCENKRDCRRSEILRYFGENFEQS 1327
Query: 214 ECRGMCDHCR-GGRRD 228
C G CD+C+ GG+ D
Sbjct: 1328 GCGGTCDNCKYGGKFD 1343
>gi|312373074|gb|EFR20899.1| hypothetical protein AND_18334 [Anopheles darlingi]
Length = 1384
Score = 137 bits (344), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 106/188 (56%), Gaps = 30/188 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------- 114
E+ +L+ +F +GI+Y S KEC+ L + R G++ +YHA L +
Sbjct: 814 EMINLIKAKFARDTGIVYCLSKKECDQLATDFRKAGIKAKSYHAGLTDTIREATQKEWIG 873
Query: 115 --------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD 166
+IAFG+GIDKP+VR+V+H+C+ KS+E +YQESGRAGRDG+IA CILYY D
Sbjct: 874 DRIKVVCATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQESGRAGRDGEIATCILYYNYSD 933
Query: 167 VFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG- 217
+ + M+ + +Q + NL +V+YC + T CRR YF E ++ +C
Sbjct: 934 MQRYRKMMDNDTSISFEAKQIHMNNLLRMVNYCENVTDCRRTQQLEYFAEYFTSEQCLSN 993
Query: 218 ---MCDHC 222
CD+C
Sbjct: 994 RDTACDNC 1001
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 28/31 (90%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V+H+C+ KS+E +YQ
Sbjct: 881 ATIAFGMGIDKPDVRYVLHYCMPKSIEGYYQ 911
>gi|255932597|ref|XP_002557855.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582474|emb|CAP80660.1| Pc12g10330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1511
Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 73/201 (36%), Positives = 111/201 (55%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L +A+ ++ ++NQ GIIY S K C+ + E+L+ + L+ AYHA
Sbjct: 849 YEVRSK-GKNDEVLASMAETITSSYQNQCGIIYCLSRKTCDKVAEDLQKKYHLKALAYHA 907
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + V +IAFG+GIDK +VRFV+HH + KS+E +YQE+GRAG
Sbjct: 908 GMSAKVKSEAQRKWQMGRVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQETGRAG 967
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LY+ D L M+ D G L N+V YC +++ CRR +
Sbjct: 968 RDGKRSGCYLYFGYKDTATLKRMI-DAGDGNGQQKARQKQMLRNVVQYCENRSDCRRVQV 1026
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF E + +C CD+C+
Sbjct: 1027 LAYFAEYFRREDCNNTCDNCK 1047
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/37 (54%), Positives = 27/37 (72%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDK +VRFV+HH + KS+E +YQ
Sbjct: 925 RVHIIVATIAFGMGIDKADVRFVMHHSIPKSLEGYYQ 961
>gi|327402848|ref|YP_004343686.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
gi|327318356|gb|AEA42848.1| ATP-dependent DNA helicase RecQ [Fluviicola taffensis DSM 16823]
Length = 726
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K +K+ + + R+ +SGIIY S K+ E+ E L+ G+ AYHA
Sbjct: 210 YYEIRAKQNVEKEIIKYI-----RQREGKSGIIYCLSRKKVEETAELLQVNGINALAYHA 264
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 265 GLDATTRARHQDMFLMEEVDVIVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 324
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG + CI +Y D+ KL V +Q+ G L IVSY + + CRR I Y
Sbjct: 325 RDGGVGECITFYSYKDIEKLEKFLQGKPVSEQEIGKQLLSEIVSYS-ETSVCRRKFILHY 383
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E + + C MCD+C+ R
Sbjct: 384 FGEEFDEQGCHEMCDNCKFPRE 405
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 289 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 318
>gi|302653064|ref|XP_003018365.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
gi|291182004|gb|EFE37720.1| RecQ family helicase MusN [Trichophyton verrucosum HKI 0517]
Length = 1341
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/252 (34%), Positives = 129/252 (51%), Gaps = 39/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L R + V + PNV+ VIH+ K E F Y+VR K AQ
Sbjct: 858 LGTMREKYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQ 917
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
D L ++ADL++ + ++ GIIY S K CE + +L ++ G++ + YHA L S
Sbjct: 918 -DALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTV 976
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK +VRFVIHH + +S+E +YQE+GRAGRDG+ + C L
Sbjct: 977 QRDWQSGKHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYL 1036
Query: 161 YYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + M+ +Q L ++ +C + T CRRA I +YFDE +
Sbjct: 1037 YYAYYDSTSIGYMIKKNKETTHEQKQRQRQMLRHVTQFCENITDCRRAQILAYFDEKFKR 1096
Query: 213 TECRGMCDHCRG 224
+C CD+C+
Sbjct: 1097 EDCNRTCDNCKS 1108
>gi|226292234|gb|EEH47654.1| ATP-dependent DNA helicase Q1 [Paracoccidioides brasiliensis Pb18]
Length = 1550
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 38/230 (16%)
Query: 33 NVRF-VIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
NV+ VIH+ ++ E F Y+VR KP + ++ +A+ ++ + Q+GII
Sbjct: 871 NVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAETINESYSGQAGII 929
Query: 82 YTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLGI 122
Y S + CE + +LR++ ++ + YHA L S +IAFG+GI
Sbjct: 930 YCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGI 989
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------FD 176
DK +VRFVIHH + KS+E +YQE+GRAGRDG+ + C LYY D L M+ F+
Sbjct: 990 DKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGSFE 1049
Query: 177 QQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
Q+ L ++V +C +++ CRR I +YF+E + C CD+C+ G
Sbjct: 1050 QKKRQRQMLRHVVQFCENESDCRRVQILAYFNEKFEPENCNRSCDNCKSG 1099
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ Y V +IAFG+GIDK +VRFVIHH + KS+E +YQ
Sbjct: 971 WQSGKYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQ 1011
>gi|50557416|ref|XP_506116.1| YALI0F31977p [Yarrowia lipolytica]
gi|49651986|emb|CAG78930.1| YALI0F31977p [Yarrowia lipolytica CLIB122]
Length = 1300
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 76/234 (32%), Positives = 122/234 (52%), Gaps = 41/234 (17%)
Query: 28 GIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIK 87
G +PN RF ++ +Y+VR+K K+ E+ D++ R+R Q+GIIY S K
Sbjct: 684 GCLRPNRRFFKQSFNRPNL--YYEVRLK---TKNFQQEITDMLRGRYRGQTGIIYCHSKK 738
Query: 88 ECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRF 129
CE E L+ G++ YHA +E+ +IAFG+GIDK +VR+
Sbjct: 739 LCETTSEFLKEAGIKADFYHAGMETEQRTYVQGNWQSGKIQVVCATIAFGMGIDKADVRY 798
Query: 130 VIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD----VFKLSSMVFDQQTGLAN-- 183
VIH + ++ME +YQE+GRAGRDG + CI+Y+ D +F +++ F + G +
Sbjct: 799 VIHCTVPRNMEGYYQETGRAGRDGLPSKCIVYFSQKDARQMLFNIANDEFLGENGKVDWA 858
Query: 184 ------------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
+ +++YC ++ CRR + YF+E + CR CD+C+ G
Sbjct: 859 LTQRQRTHHRELMQGVINYCENRVDCRRVQVLRYFNETFDPKLCRNSCDNCQYG 912
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ QV +IAFG+GIDK +VR+VIH + ++ME +YQ
Sbjct: 773 WQSGKIQVVCATIAFGMGIDKADVRYVIHCTVPRNMEGYYQ 813
>gi|302509478|ref|XP_003016699.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
gi|291180269|gb|EFE36054.1| RecQ family helicase MusN [Arthroderma benhamiae CBS 112371]
Length = 1441
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 129/251 (51%), Gaps = 39/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L R + V + PNV+ VIH+ K E F Y+VR K AQ
Sbjct: 829 LGTMREKYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQ 888
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
D L ++ADL++ + ++ GIIY S K CE + +L ++ G++ + YHA L S
Sbjct: 889 -DALKDIADLITNDYPDKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTV 947
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK +VRFVIHH + +S+E +YQE+GRAGRDG+ + C L
Sbjct: 948 QRDWQSGKHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYL 1007
Query: 161 YYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + M+ +Q L ++ +C + T CRRA I +YFDE +
Sbjct: 1008 YYAYYDSTSIGYMIKKNKETTHEQKQRQRQMLRHVTQFCENITDCRRAQILAYFDEKFKR 1067
Query: 213 TECRGMCDHCR 223
+C CD+C+
Sbjct: 1068 EDCNRTCDNCK 1078
>gi|367043916|ref|XP_003652338.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
gi|346999600|gb|AEO66002.1| hypothetical protein THITE_2113711 [Thielavia terrestris NRRL 8126]
Length = 1637
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 84/257 (32%), Positives = 127/257 (49%), Gaps = 35/257 (13%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLS-KSMENFYQVRIKPAAQKDCLDE---- 65
L +R +F V + NV I H LS + E F Q +P + +++
Sbjct: 858 LGQFRLAFTGVPVMALTATATSNVIADIKHNLSMEGCEVFSQSFNRPNLYYEVIEKQTRF 917
Query: 66 ---LADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN-------- 113
+ +++++++ QSGI+YT S K E L + G++ YHA ++
Sbjct: 918 IQGMGEMITKKYPGQSGIVYTLSRKSAEGTASTLATKHGIKARYYHAMMDPESKAEVQRK 977
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDKP+VRFVIH L KS+E +YQE+GRAGRDGQ + C LY+
Sbjct: 978 WQEGEIHVVVATIAFGMGIDKPDVRFVIHQNLPKSLEGYYQETGRAGRDGQPSDCYLYFS 1037
Query: 164 LPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
DV L M+ +++ A L +V+YC CRR I YF E + +C
Sbjct: 1038 YGDVPALRRMINEDKDKPKEEKERQHAMLNRMVTYCESTHTCRRVQILQYFGERFDAAQC 1097
Query: 216 RGMCDHCRGGRRDAKRV 232
CD+CR G+++ V
Sbjct: 1098 NDKCDNCRNGKKNGAAV 1114
>gi|225681066|gb|EEH19350.1| ATP-dependent DNA helicase hus2/rqh1 [Paracoccidioides brasiliensis
Pb03]
Length = 1550
Score = 136 bits (343), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 125/230 (54%), Gaps = 38/230 (16%)
Query: 33 NVRF-VIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
NV+ VIH+ ++ E F Y+VR KP + ++ +A+ ++ + Q+GII
Sbjct: 871 NVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAETINESYSGQAGII 929
Query: 82 YTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLGI 122
Y S + CE + +LR++ ++ + YHA L S +IAFG+GI
Sbjct: 930 YCLSRRSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGI 989
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------FD 176
DK +VRFVIHH + KS+E +YQE+GRAGRDG+ + C LYY D L M+ F+
Sbjct: 990 DKADVRFVIHHTMPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGSFE 1049
Query: 177 QQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
Q+ L ++V +C +++ CRR I +YF+E + C CD+C+ G
Sbjct: 1050 QKKRQRQMLRHVVQFCENESDCRRVQILAYFNEKFEPENCNRSCDNCKSG 1099
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ Y V +IAFG+GIDK +VRFVIHH + KS+E +YQ
Sbjct: 971 WQSGKYNVIVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQ 1011
>gi|390599702|gb|EIN09098.1| ATP-dependent DNA helicase [Punctularia strigosozonata HHB-11173
SS5]
Length = 828
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/218 (36%), Positives = 112/218 (51%), Gaps = 33/218 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG---LRVSAY 106
Y+V KPAA KD L +A + +QSGI+Y K+ ED+ LR ++ Y
Sbjct: 345 YKVLPKPAASKDVLKVMAQYILTNHADQSGIVYCYRKKDTEDVAAGLREHSDSRIKTGVY 404
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +IAFGLGIDK +VRFV+HH +SKS++ +YQE+GR
Sbjct: 405 HADIGDTAKEQLHTRWRKGEIKIVCATIAFGLGIDKGDVRFVLHHSMSKSLDGYYQETGR 464
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDG+ A C+LYYR D LS++V+ Q+ GL L ++ + D CR+ + A +F
Sbjct: 465 AGRDGKDASCVLYYRPQDASSLSALVYGQRDGLDKLSQMLRFAHDVEECRKILFAKHFSA 524
Query: 209 A-------WSDTECR-----GMCDHCRGGRRDAKRVDV 234
+ W + G CD+C D R DV
Sbjct: 525 SSQLSLSEWQEGGSSVLQRCGHCDNCTRPPEDVDRRDV 562
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR ++ +IAFGLGIDK +VRFV+HH +SKS++ +YQ
Sbjct: 420 WRKGEIKIVCATIAFGLGIDKGDVRFVLHHSMSKSLDGYYQ 460
>gi|403364021|gb|EJY81760.1| ATP-dependent DNA helicase, RecQ family protein [Oxytricha
trifallax]
Length = 923
Score = 136 bits (343), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 112/209 (53%), Gaps = 27/209 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLM-SRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
Y++R K +K+ +++ L+ R++ QSGIIY S ECE+L EL ++ YH
Sbjct: 546 LYEIRDKAKIKKNIAEDIIMLLRDRKYVYQSGIIYCLSRTECEELCRELSEFDVKCDYYH 605
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
AK+ N +IAFGLGI+K +VRFVIH + KS+EN+ QE GRA
Sbjct: 606 AKMNENERRIIQQRWMRNEIHIIIATIAFGLGINKRDVRFVIHTTIPKSLENYAQECGRA 665
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAI 201
GRDG+ A+CILYY D +L + A LY I+ +C + CRR I
Sbjct: 666 GRDGENANCILYYSYADRKRLEFFIISNTENTAGRKNENLHALYKILEFCEEPYLCRRKI 725
Query: 202 IASYFDEAWSDTECRGMCDHCRGGRRDAK 230
+ +Y E + +C MCD+CR G R A+
Sbjct: 726 LLNYLGEDFKSKKCNNMCDNCRKGLRVAE 754
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFGLGI+K +VRFVIH + KS+EN+ Q
Sbjct: 630 ATIAFGLGINKRDVRFVIHTTIPKSLENYAQ 660
>gi|327303226|ref|XP_003236305.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
gi|326461647|gb|EGD87100.1| ATP-dependent DNA helicase [Trichophyton rubrum CBS 118892]
Length = 1556
Score = 136 bits (342), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 88/251 (35%), Positives = 128/251 (50%), Gaps = 39/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L R + V + PNV+ VIH+ K E F Y+VR K AQ
Sbjct: 858 LGTMREKYSGVPVMALTATATPNVQVDVIHNLRMKGCEVFTQSFNRPNLTYEVRKKGRAQ 917
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
D L ++ADL++ + + GIIY S K CE + +L ++ G++ + YHA L S
Sbjct: 918 -DALKDIADLITNDYPEKCGIIYCLSRKTCERVAMQLSSKFGVKAAHYHAGLSSKDRFTV 976
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK +VRFVIHH + +S+E +YQE+GRAGRDG+ + C L
Sbjct: 977 QRDWQSGKHNVIVATIAFGMGIDKADVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYL 1036
Query: 161 YYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + M+ +Q L ++ +C + T CRRA I +YFDE +
Sbjct: 1037 YYAYYDSTSIGYMIKKNKETTHEQKQRQRQMLRHVTQFCENITDCRRAQILAYFDEKFKR 1096
Query: 213 TECRGMCDHCR 223
+C CD+C+
Sbjct: 1097 EDCNRTCDNCK 1107
>gi|66802111|ref|XP_629849.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|60463228|gb|EAL61421.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 1259
Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats.
Identities = 73/214 (34%), Positives = 116/214 (54%), Gaps = 35/214 (16%)
Query: 41 CLSKSMEN---FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR 97
C +S YQV K K +D+++ + + ++SGI+Y S +CE++ + LR
Sbjct: 711 CFKQSFNRPNLIYQVLKK---TKQVVDDMSKFIHSTYPDKSGIVYCISKYDCENVAKRLR 767
Query: 98 NRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSM 139
+ + YHA LE++ +IAFG+GI+K +VRFVIHH + KS+
Sbjct: 768 ELKISAAHYHAGLENDERAKVQANWQKGRIKVIVATIAFGMGINKADVRFVIHHSVPKSL 827
Query: 140 ENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---FDQQTGLA--------NLYNIV 188
E +YQESGRAGRDG I+HC+LY+ D + ++ F G + +L +V
Sbjct: 828 EGYYQESGRAGRDGGISHCLLYFSWADKLRNDLLIQNSFTSGQGSSHNTRETRDSLNKMV 887
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+YC ++T CRR + +YF E + + C+ CD+C
Sbjct: 888 NYCENETDCRRQLQLAYFGENFEKSGCKKTCDNC 921
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+K +VRFVIHH + KS+E +YQ
Sbjct: 803 TIAFGMGINKADVRFVIHHSVPKSLEGYYQ 832
>gi|149239801|ref|XP_001525776.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449899|gb|EDK44155.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1317
Score = 136 bits (342), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
Y+++ K +KD L+++ + RF +GI++ S + CED +L GL YHA
Sbjct: 999 LYEIKWK---KKDYLEDIKTYIMTRFPRSTGILFCNSKQACEDTSSKLNELGLSTGFYHA 1055
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAG
Sbjct: 1056 GMSTEDRFQAQHLWQTGKTRIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAG 1115
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CILYY D L +++ ++ LA L +V YC + T CRR +
Sbjct: 1116 RDGKASECILYYCYRDARSLQNLIHRDENLTEEGKENHLAKLRQVVQYCENTTDCRRQQV 1175
Query: 203 ASYFDEAWSDTECRGMCDHCRG 224
YF+E+++ +C+ CD+C+
Sbjct: 1176 LHYFNESFNPVDCKKQCDNCKN 1197
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW+T ++ +IAFG+GIDKP+VRFVIH + +S+E +YQ
Sbjct: 1068 LWQTGKTRIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQ 1109
>gi|452838315|gb|EME40256.1| hypothetical protein DOTSEDRAFT_179253 [Dothistroma septosporum
NZE10]
Length = 1189
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 111/200 (55%), Gaps = 27/200 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y+VR+K + D L +A L+ Q+GIIY S K+CE++ L+++ G++ YH
Sbjct: 507 YYEVRMKGKGKND-LASIASLIKDDHPKQTGIIYCFSRKDCENMANALQSQHGIKAHHYH 565
Query: 108 AKLE----SNV--------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E +NV +IAFG+GIDKPNVRFVIHH + KS+E +YQE+GRA
Sbjct: 566 AGMEGPEKANVQKEWQAGRYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYYQETGRA 625
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-------LYNIVSYCLDQTRCRRAII 202
GRDG+ + C L+Y D K + D + L + YC +++ CRR +
Sbjct: 626 GRDGKPSSCYLFYGFGDASKQKRFIDDGEGSHEQKERQRQMLKKMTQYCDNRSDCRRVQV 685
Query: 203 ASYFDEAWSDTECRGMCDHC 222
YF E + +C G CD+C
Sbjct: 686 LGYFSERFDPEDCDGGCDNC 705
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y V +IAFG+GIDKPNVRFVIHH + KS+E +YQ
Sbjct: 580 WQAGRYHVIVATIAFGMGIDKPNVRFVIHHTIPKSLEGYYQ 620
>gi|324516572|gb|ADY46570.1| ATP-dependent DNA helicase Q1, partial [Ascaris suum]
Length = 430
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/157 (45%), Positives = 97/157 (61%), Gaps = 32/157 (20%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
++ F G ++PN+ +Y+VR KP++ + LDEL L++ RF QSGII
Sbjct: 266 AVVFRAGFNRPNL--------------YYEVRNKPSSSEQFLDELVSLINDRFDGQSGII 311
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S KECEDL LR+R ++ + YHA LES+ ++AFG+GID
Sbjct: 312 YCFSRKECEDLTHALRSRKIKAAHYHAYLESDKRSRTHERWIGGEVDVIVATVAFGMGID 371
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
K +VR+VIHH ++KSMEN+YQESGRAGRDG+ A CIL
Sbjct: 372 KTDVRYVIHHSMAKSMENYYQESGRAGRDGKQATCIL 408
>gi|194901954|ref|XP_001980516.1| GG17198 [Drosophila erecta]
gi|190652219|gb|EDV49474.1| GG17198 [Drosophila erecta]
Length = 1457
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/205 (38%), Positives = 108/205 (52%), Gaps = 32/205 (15%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD+++ + + + SGIIY S KEC++ + + G+R AYHA L
Sbjct: 905 RVLPKKGASTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKRMCKDGVRAVAYHAGLTD 964
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG
Sbjct: 965 TEREGRQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGD 1024
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASY 205
+A CILYY D+ ++ M+ D L NLY IV YC + T CRRA Y
Sbjct: 1025 VADCILYYNYADMLRIKKMM-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDY 1083
Query: 206 FDEAWSDTEC----RGMCDHCRGGR 226
F E ++ +C CD+C R
Sbjct: 1084 FGEHFTSEQCLANKETACDNCLNKR 1108
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V +IAFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 974 WLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 1014
>gi|157104176|ref|XP_001648286.1| blooms syndrome DNA helicase [Aedes aegypti]
gi|108880401|gb|EAT44626.1| AAEL004039-PA [Aedes aegypti]
Length = 1406
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 128/252 (50%), Gaps = 40/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENFY---------QVRIKPAAQK 60
L++ R F + I P VR VI KS ++ + ++P
Sbjct: 820 LSVLREQFPSIPIMALTATANPRVRVDVIKQLRLKSDTKWFLCSFNRPNLKYIVRPKQGV 879
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------- 113
E+ DL+ +++ SGI+Y + K+C+ L E+++ G+ +YHA L +
Sbjct: 880 ATKQEIIDLIKKKYPRASGIVYCLAKKDCDQLAAEMKSAGISAKSYHAGLSDSQRESTQK 939
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIHH + KS+E +YQE+GRAGRDG + CILYY
Sbjct: 940 DWIADKTKVVCATIAFGMGIDKPDVRYVIHHSIPKSIEGYYQEAGRAGRDGDFSTCILYY 999
Query: 163 RLPDVFKLSSMV-FD-------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
D+ + M+ FD ++ + NL+ +V YC + T CRR+ +YF E ++ +
Sbjct: 1000 NYSDMLRFRKMMDFDSSIPFEAKKVHVNNLFRMVDYCENVTDCRRSQQLNYFAEHFTREQ 1059
Query: 215 C----RGMCDHC 222
C CD+C
Sbjct: 1060 CLENRATACDNC 1071
>gi|428173190|gb|EKX42094.1| BLM RecQ DNA helicase family member, partial [Guillardia theta
CCMP2712]
Length = 412
Score = 135 bits (341), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/221 (35%), Positives = 114/221 (51%), Gaps = 38/221 (17%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYT 83
F ++PN+R Y+VR K +K + +A + + ++GIIY
Sbjct: 208 TFMQSFNRPNLR--------------YEVRKK--EKKKSAENIATFIKENYPGETGIIYC 251
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKP 125
S CE++ +++ ++ YHA L+ +IAFG+GI+KP
Sbjct: 252 LSKNRCEEMAAKMQEFKIKALPYHAGLDDQTRKFNQDQWSNDKTHVIVATIAFGMGINKP 311
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF---KLSSMVFDQQTGL- 181
+VRFVIH L KSME +YQESGRAGRDG+I+HCILYY D K++ FD++ +
Sbjct: 312 DVRFVIHESLPKSMEGYYQESGRAGRDGKISHCILYYSYSDKLVHDKMAQDDFDKKENVR 371
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
NL +V YC Q CRR + YF E + +C CD+C
Sbjct: 372 NNLNKMVEYCETQFTCRRQLQLHYFGENFGPDKCGKTCDNC 412
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+T +IAFG+GI+KP+VRFVIH L KSME +YQ
Sbjct: 294 KTHVIVATIAFGMGINKPDVRFVIHESLPKSMEGYYQ 330
>gi|344231853|gb|EGV63732.1| ATP-dependent DNA helicase [Candida tenuis ATCC 10573]
Length = 1031
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 131/258 (50%), Gaps = 40/258 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLS-KSMENF----------YQVRIKPAAQ 59
++++R ++ + I VR I H L+ KS + F Y++R+K A
Sbjct: 505 MSIFRQNYPDIPIMALTATANDKVRLDILHLLNMKSPKVFKQSFNRINLYYEIRMKKAG- 563
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
++++ D + +++NQ+GIIY S + CE + +L G+ + YHA + +
Sbjct: 564 --FVEDIRDTILAKYKNQTGIIYCHSKQSCEQISMKLNQFGIESAFYHAGMSTEDRFEVQ 621
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKPNVRFVIH L +++E +YQE+GRAGRDG + CI+Y
Sbjct: 622 DSWQQERLRVICATIAFGMGIDKPNVRFVIHSFLPRNLEGYYQETGRAGRDGLHSDCIMY 681
Query: 162 YRLPDVFKLSSMV-----FDQQTG---LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L M+ ++Q T L+ L ++ YC + CRR + YF+E +
Sbjct: 682 YSYKDARNLQLMIQKDEEYNQATKDNHLSKLRQVIQYCENNHDCRRRQVLQYFNENFDPK 741
Query: 214 ECRGMCDHCRGGRRDAKR 231
+C+ CD C + R
Sbjct: 742 DCQKQCDSCNNNGSEISR 759
>gi|170042287|ref|XP_001848863.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
gi|167865792|gb|EDS29175.1| ATP-dependent DNA helicase hus2 [Culex quinquefasciatus]
Length = 1437
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/259 (32%), Positives = 133/259 (51%), Gaps = 59/259 (22%)
Query: 7 TIAYLNLWRTSFYQVSI----AFGLG---------IDKPNVRFVIHHCLSKSMENFYQVR 53
TI + L T+ +V I GLG ++PN++++I
Sbjct: 852 TIPVMALTATANPRVRIDVLKQLGLGRNTKWFLCSFNRPNLKYII--------------- 896
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL--- 110
+P E+ +L+ ++F +GI+Y S K+C+ L E+R G++ +YHA L
Sbjct: 897 -RPKQGVATKAEIMELIKKKFPRATGIVYCLSKKDCDQLSAEMRCAGIKAKSYHAGLGDA 955
Query: 111 --ESN-------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
E+ +IAFG+GIDKP+VR+VIHH + KS+E +YQE+GRAGRDG++
Sbjct: 956 EREATQKDWITDKIKVVCATIAFGMGIDKPDVRYVIHHSMPKSIEGYYQEAGRAGRDGEL 1015
Query: 156 AHCILYYRLPDVFKL-------SSMVFD-QQTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
A C+L+Y D+ + SS+ F+ +Q L NL+ +V+YC + CRR YF
Sbjct: 1016 ATCVLFYNYSDMLRYRKMMDHDSSIPFEAKQVHLHNLFRMVNYCENVADCRRTQQLDYFA 1075
Query: 208 EAWSDTEC----RGMCDHC 222
E ++ +C CD+C
Sbjct: 1076 EHFTREQCLENRASACDNC 1094
>gi|195501810|ref|XP_002097953.1| GE10090 [Drosophila yakuba]
gi|194184054|gb|EDW97665.1| GE10090 [Drosophila yakuba]
Length = 1490
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 79/202 (39%), Positives = 110/202 (54%), Gaps = 32/202 (15%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-- 113
P LD+++ + + + SGIIY S KEC++ +++ G+R AYHA L +
Sbjct: 941 PKKGTSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDGVRSVAYHAGLTDSER 1000
Query: 114 ----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG +A
Sbjct: 1001 EGRQKDWLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVAE 1060
Query: 158 CILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASYFDE 208
CILYY D+ +L M+ D L NLY IV YC + T CRRA YF E
Sbjct: 1061 CILYYNYADMLRLKKMM-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGE 1119
Query: 209 AWSDTEC---RGM-CDHCRGGR 226
++ +C +G CD+C R
Sbjct: 1120 HFTSEQCLENKGTACDNCLNKR 1141
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V +IAFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 1007 WLTGKIRVICATIAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 1047
>gi|150866421|ref|XP_001386017.2| ATP-dependent DNA helicase [Scheffersomyces stipitis CBS 6054]
gi|149387677|gb|ABN67988.2| ATP-dependent DNA helicase, partial [Scheffersomyces stipitis CBS
6054]
Length = 1148
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 127/253 (50%), Gaps = 44/253 (17%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN-------------FYQVRIKPA 57
+ L++ + V I VR I H L MEN +Y+++ K A
Sbjct: 618 MGLFKERYPNVPIMALTATANEKVRLDIVHNLK--MENAVLLKQSFNRTNLYYEIKWKAA 675
Query: 58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---- 113
+ ++ + D + + N++GIIY S + CE +L + GL + YHA +
Sbjct: 676 ---NYVEWIKDYILKNQNNKTGIIYCHSKQSCEQTSAKLNSFGLHTAFYHAGMSPQDRFD 732
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VR+VIH + +S+E +YQE+GRAGRDG+ + CI
Sbjct: 733 IQSQWQTGRIQLICATIAFGMGIDKPDVRYVIHLFIPRSLEGYYQETGRAGRDGKQSDCI 792
Query: 160 LYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
++Y D L SM+ ++ LA L +V YC + T CRR + YF+E++S
Sbjct: 793 MFYSYKDARSLQSMIQRDEELTKEGKENHLAKLRQVVQYCENTTDCRRQQVLQYFNESFS 852
Query: 212 DTECRGMCDHCRG 224
+CR CD+C+
Sbjct: 853 PADCRKQCDNCQN 865
>gi|440913178|gb|ELR62661.1| Bloom syndrome protein [Bos grunniens mutus]
Length = 1430
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 31/175 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + E L+N GL AYHA L +
Sbjct: 890 DCLE----WIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSARDEVQH 945
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HCIL+
Sbjct: 946 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILF 1005
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE 208
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E
Sbjct: 1006 YTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGE 1060
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 958 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 988
>gi|297487976|ref|XP_002696629.1| PREDICTED: Bloom syndrome protein [Bos taurus]
gi|296475516|tpg|DAA17631.1| TPA: Bloom syndrome, RecQ helicase-like [Bos taurus]
Length = 1430
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 31/175 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + E L+N GL AYHA L +
Sbjct: 890 DCLE----WIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSARDEVQH 945
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HCIL+
Sbjct: 946 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILF 1005
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE 208
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E
Sbjct: 1006 YTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGE 1060
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 958 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 988
>gi|449550071|gb|EMD41036.1| hypothetical protein CERSUDRAFT_149672 [Ceriporiopsis subvermispora
B]
Length = 645
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 112/196 (57%), Gaps = 29/196 (14%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLES----- 112
++D + ++A+ + ++ ++GIIY S ECE + + L R + AYHA++
Sbjct: 193 ERDSIHKIAESIQEKYSGETGIIYCRSRSECEKVAKTLTERYNISTEAYHARVPQLAKRD 252
Query: 113 -------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+ AFG+GIDKP+VRFVIH+C+ +S+E +YQE+GRAGRDG+ + CI
Sbjct: 253 VLQAWQNGSCQVVAATTAFGMGIDKPDVRFVIHNCVPRSLEGYYQETGRAGRDGKPSDCI 312
Query: 160 LYYRLPDVFKLSSMVFDQQTGLAN---------LYNIVSYCLDQTRCRRAIIASYFDEAW 210
LYYR D L + V +++ GL+ + +V YC + T CRR + +YF+E +
Sbjct: 313 LYYRYRDGESLFAAVRNKE-GLSTEGKRAAQEGIRQVVEYCQNVTDCRRCQLLTYFEEIF 371
Query: 211 SDTECRGMCDHCRGGR 226
+C G CD+CR R
Sbjct: 372 DSRDCNGHCDNCRDSR 387
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L W+ QV + AFG+GIDKP+VRFVIH+C+ +S+E +YQ
Sbjct: 254 LQAWQNGSCQVVAATTAFGMGIDKPDVRFVIHNCVPRSLEGYYQ 297
>gi|134109345|ref|XP_776787.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259467|gb|EAL22140.1| hypothetical protein CNBC2780 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1217
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 80/224 (35%), Positives = 119/224 (53%), Gaps = 35/224 (15%)
Query: 41 CLSKSMEN---FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR 97
CL +S Y+VR K ++ + E+ + + SGI+Y S CE+L ++LR
Sbjct: 579 CLRQSFNRPNLHYEVRPKTSS---VIQEIVAFVHTQEARASGIVYCNSRDNCENLAKKLR 635
Query: 98 -NRGLRVSAYHA-----------------KLESNV-SIAFGLGIDKPNVRFVIHHCLSKS 138
+ GLR YHA K E V +IAFG+GIDKP+VR+VIHH L +S
Sbjct: 636 EDHGLRAYHYHAGMTKENRRKMQEGWQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRS 695
Query: 139 MENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL---------ANLYNIVS 189
+E +YQE+GRAGRDG + CILYY D K+ + DQ+ L A++ ++
Sbjct: 696 LEGYYQETGRAGRDGNPSTCILYYSFKDGKKILGQI-DQEKDLTRDQKERQKASMQEVLR 754
Query: 190 YCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
YC ++ CRR+ + ++F+E + C CD C G R+ R +
Sbjct: 755 YCNNKVDCRRSQVLAFFNETFDAANCNQGCDVCLGRDRNVFRTE 798
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +++ +IAFG+GIDKP+VR+VIHH L +S+E +YQ
Sbjct: 661 WQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQ 701
>gi|159465525|ref|XP_001690973.1| hypothetical protein CHLREDRAFT_128016 [Chlamydomonas reinhardtii]
gi|158279659|gb|EDP05419.1| predicted protein [Chlamydomonas reinhardtii]
Length = 489
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 108/193 (55%), Gaps = 29/193 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR KPAA D + + + R +SGI+Y + K+CE L +L G+R YH
Sbjct: 207 FYEVRPKPAAAADMTAAIVAWIREHYPRGESGIVYCLTRKDCEALAADLAAAGIRARHYH 266
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E +IAFG+GI+KP+VRFVIHH LSKS+EN+YQESGRA
Sbjct: 267 ADMEPGPREAAHTAWSAGRVQVMVATIAFGMGINKPDVRFVIHHSLSKSVENYYQESGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG A C+L+YR + S G +L+ Q CRRA+I +F EA
Sbjct: 327 GRDGLPARCLLFYRCAATSRPSPTTLLTCGGGGHLH--------QAGCRRALIHRHFAEA 378
Query: 210 WSDTECRGMCDHC 222
SD CRGMCD+C
Sbjct: 379 PSD--CRGMCDNC 389
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIHH LSKS+EN+YQ
Sbjct: 281 WSAGRVQVMVATIAFGMGINKPDVRFVIHHSLSKSVENYYQ 321
>gi|119913638|ref|XP_613809.3| PREDICTED: Bloom syndrome protein [Bos taurus]
Length = 1430
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 31/175 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + E L+N GL AYHA L +
Sbjct: 890 DCLE----WIRKHHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSARDEVQH 945
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HCIL+
Sbjct: 946 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILF 1005
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE 208
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E
Sbjct: 1006 YTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGE 1060
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 958 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 988
>gi|168052509|ref|XP_001778692.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669907|gb|EDQ56485.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 521
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/254 (33%), Positives = 125/254 (49%), Gaps = 59/254 (23%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + L KS K CL+++ + R N+SGIIY
Sbjct: 196 IIFRQTFNRPNLRYEV---LPKS--------------KKCLEDIDKFIRERHPNESGIIY 238
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + E+LR G +V+ YH +++ + ++AFG+GI+K
Sbjct: 239 CLSRSDCEKVTEKLREFGHKVAFYHGQMDPDERSYVQRMWSKDEVNIICATVAFGMGINK 298
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ------- 177
P+VRFVIHH L KS+E ++QESGRAGRD A CILYY D +L M+
Sbjct: 299 PDVRFVIHHSLPKSLEGYHQESGRAGRDNLPASCILYYTYADSIRLKHMLTQGAAELGST 358
Query: 178 ---------------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD-TECRGMCDH 221
T L NL ++ YC + CRR++ ++F E D + C+G CD+
Sbjct: 359 GSSFRNHNTVTSNQLSTNLDNLNRMIGYCQNDIDCRRSLQLAHFGEMDFDVSSCKGTCDN 418
Query: 222 C-RGGRRDAKRVDV 234
C R G + DV
Sbjct: 419 CARMGNSGSVEEDV 432
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 289 TVAFGMGINKPDVRFVIHHSLPKSLEGYHQ 318
>gi|237830999|ref|XP_002364797.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211962461|gb|EEA97656.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221507678|gb|EEE33282.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 932
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 81/204 (39%), Positives = 112/204 (54%), Gaps = 34/204 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--Y 106
FY V KP ++ + +AD + + F QSGI+Y S KE E L L+ R R+S Y
Sbjct: 387 FYHVVHKPKTSEEQIRLIADFI-KAFNGQSGILYCLSRKEAETLCVALK-RDFRISCAFY 444
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H L++N ++AFG+GI+K +VRFV+HH L KS++N+YQE+GR
Sbjct: 445 HGDLDANSRLEIHRQWSTGYISVVVATVAFGMGINKADVRFVVHHSLPKSLDNYYQETGR 504
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYC----------LDQTRCR 198
AGRDG AHC+L YR DV + S MV+ + +GL LY +V +C RCR
Sbjct: 505 AGRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRFCSGLEPLRSGTWSGRRCR 564
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R I ++F +A C MCD C
Sbjct: 565 REAICAHFGDA--AVSCERMCDQC 586
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T + V ++AFG+GI+K +VRFV+HH L KS++N+YQ
Sbjct: 460 WSTGYISVVVATVAFGMGINKADVRFVVHHSLPKSLDNYYQ 500
>gi|444722124|gb|ELW62827.1| Bloom syndrome protein [Tupaia chinensis]
Length = 1266
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 130/262 (49%), Gaps = 41/262 (15%)
Query: 6 YTIAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQK-DCLD 64
YT+ L Q I L I +P V ++ +Y + KP DCLD
Sbjct: 632 YTVMALTATANPRVQKDILTQLKILRPQV---FSMSFNRHNLKYYVLPKKPKKVAFDCLD 688
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------- 113
+ + SGIIY S EC+ + + LR GL AYHA L +
Sbjct: 689 ----WIRKHHPYDSGIIYCLSRHECDTMADTLRKDGLAALAYHAGLSDSSRDEVQHKWIN 744
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y
Sbjct: 745 QDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYH 804
Query: 166 DVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CR 216
DV +L ++ ++ G NLY++V YC + T CRR + +YF E + + C+
Sbjct: 805 DVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCK 864
Query: 217 G----MCDHCRGGRRDAKRVDV 234
CD+C R+D K DV
Sbjct: 865 EYPEVSCDNC-CKRKDYKTRDV 885
>gi|260949491|ref|XP_002619042.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
gi|238846614|gb|EEQ36078.1| hypothetical protein CLUG_00201 [Clavispora lusitaniae ATCC 42720]
Length = 1408
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSM----------ENFYQVRIKPAAQ 59
++L++ F +V I VR ++HH K++ FY+VR KP
Sbjct: 821 MSLFKEKFPEVPIMALTATANEKVRLDIVHHLRMKNLVLLKQSFNRTNLFYEVRNKPP-- 878
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ + + D + + ++GIIY S + CE ++L + G++ YHA ++ N
Sbjct: 879 -NLYEWIRDYVMGKMAGKTGIIYCHSKQSCETTAQKLNDWGIKCMYYHAGMDPNERFDVQ 937
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + KS+E +YQE+GRAGRDG+ + CI++
Sbjct: 938 TQWQHNKIQLICATIAFGMGIDKPDVRFVIHMYIPKSLEGYYQETGRAGRDGKESECIMF 997
Query: 162 YRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L S++ +++ L+ L +V YC ++T CRR + +F+E++
Sbjct: 998 YSYKDARALQSLIQRDRNLEESARESHLSKLRQVVQYCENKTDCRRKQVLHFFNESFDPA 1057
Query: 214 ECRGMCDHC 222
C CD+C
Sbjct: 1058 NCARKCDNC 1066
>gi|301096912|ref|XP_002897552.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
gi|262107012|gb|EEY65064.1| bloom syndrome protein, DEAD/DEAH box helicase [Phytophthora
infestans T30-4]
Length = 400
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/210 (34%), Positives = 117/210 (55%), Gaps = 29/210 (13%)
Query: 50 YQVRIKP-AAQKDCLDELADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYH 107
++VR KP K LD L L+S+ + + GI+Y + ++CE++ L + GL YH
Sbjct: 188 FEVRDKPRGGDKKALDALYQLISKTYPPDAVGIVYCMTKQDCENVANYLFDHGLSADFYH 247
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + +IA+G+GI+KP+VR+VIH ++KS+E +YQE+GRA
Sbjct: 248 AGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRA 307
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRA 200
GRDG+ + CIL+Y DV K+ +++ Q G+ L ++ YC D T CRR
Sbjct: 308 GRDGKPSQCILFYSPRDVSKMRNILSMPQKGMTKKTRAVHIEKLRSMAEYCEDDTTCRRQ 367
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRRDAK 230
++ SYF + + ++C CD+CR +R A+
Sbjct: 368 LLISYFGQQFQRSDCNQTCDNCRRTQRAAR 397
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IA+G+GI+KP+VR+VIH ++KS+E +YQ
Sbjct: 272 ATIAYGMGINKPDVRYVIHFSVAKSIEGYYQ 302
>gi|440794542|gb|ELR15702.1| ATPdependent DNA helicase, RecQ subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 621
Score = 134 bits (338), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 75/178 (42%), Positives = 103/178 (57%), Gaps = 26/178 (14%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
++SGIIY S KECE + +L+ ++ + YHA L +IA
Sbjct: 357 SESGIIYCLSKKECEAMARKLQAAKIQANFYHAGLSPAKREKVQRKWMAGEFAVMVATIA 416
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD-----VFKLSS 172
FGLGIDK +VRFVIHH L +++E+FYQESGRAGRDG A C+++YR D +LSS
Sbjct: 417 FGLGIDKADVRFVIHHSLPRTIEDFYQESGRAGRDGLNADCVVFYRHSDRPRHTFMQLSS 476
Query: 173 M--VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRGMCDHCRGGRR 227
F +T L + + ++C D TRCRR ++ YF EA++ C GMCD+C G R
Sbjct: 477 CKNAFQARTKLEKMRQLTAWCEDHTRCRRELLLEYFGEAFTGGACCNGMCDNCLFGAR 534
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFGLGIDK +VRFVIHH L +++E+FYQ
Sbjct: 413 ATIAFGLGIDKADVRFVIHHSLPRTIEDFYQ 443
>gi|340914758|gb|EGS18099.1| hypothetical protein CTHT_0061140 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 2325
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 35/217 (16%)
Query: 49 FYQVRIK-PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAY 106
+Y+VR K P +D + +++ ++ QSGIIYT S E L+ + L+V Y
Sbjct: 1569 YYEVRHKGPHYVRD----IGEMIINKYPGQSGIIYTLSRHAAESTAATLKEKFHLKVRHY 1624
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA+++ ++ +IAFG+GIDKP+VRFVIH + KS+E +YQE+GR
Sbjct: 1625 HAQIDPSLKVEIQNEWQSGEIQVVVATIAFGMGIDKPDVRFVIHQNIPKSLEGYYQETGR 1684
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRA 200
AGRDGQ + C LY+ DV L ++ + L L N++ YC + CRR
Sbjct: 1685 AGRDGQGSDCYLYFCWQDVPILRRLINNDPEKLPEEKARQRDLLNNMIMYCESKYACRRV 1744
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRRDA---KRVDV 234
I YF E + +C +CD+CR GR A ++VDV
Sbjct: 1745 QILRYFGEQFDPADCNNLCDNCREGRTGAGGFEKVDV 1781
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 24/43 (55%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W++ QV +IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 1638 NEWQSGEIQVVVATIAFGMGIDKPDVRFVIHQNIPKSLEGYYQ 1680
>gi|342320631|gb|EGU12570.1| Hypothetical Protein RTG_01103 [Rhodotorula glutinis ATCC 204091]
Length = 979
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 84/257 (32%), Positives = 126/257 (49%), Gaps = 50/257 (19%)
Query: 1 MFALLYTIAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQK 60
M +L A L+ + + ++ F + +PN+R Y + KP++ +
Sbjct: 379 MLKILTLPANLSPGNAALPKTTVLFTAPLYRPNLR--------------YAIVPKPSSAQ 424
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL----RNRG-LRVSAYHAKLESN-- 113
LD + D + + +GIIYT S + E+L + + R +G LR + YHA LE
Sbjct: 425 TALDAIVDWILENRKGSTGIIYTLSRADSENLTKGINGHERAKGKLRAAFYHAYLEDAEK 484
Query: 114 -----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIA 156
S +FGLGID PNVRFVIHH L KS+ N+ QESGRAGRDG+ A
Sbjct: 485 QRVHEMWMSGKIQVVVATSASFGLGIDNPNVRFVIHHSLPKSLANYQQESGRAGRDGEPA 544
Query: 157 HCILYYRLPDVFKLSSMVFD--QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW---- 210
C+ ++R D +LSS+ ++ G LY +V + D+ CR+ + YF ++
Sbjct: 545 DCVTFWRAADASRLSSLTYETFHTGGKDKLYEVVRFAEDKKTCRKILFGRYFRNSYDSSV 604
Query: 211 -----SDTECRGMCDHC 222
SDT C CD+C
Sbjct: 605 NTEEDSDTPCE-HCDNC 620
>gi|296813367|ref|XP_002847021.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
gi|238842277|gb|EEQ31939.1| RecQ family helicase MusN [Arthroderma otae CBS 113480]
Length = 1550
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 127/251 (50%), Gaps = 39/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L R + V + PNV+ VIH+ K + F Y+VR K AQ
Sbjct: 854 LGKMRERYTGVPVMALTATATPNVQVDVIHNLHMKGCDVFTQSFNRPNLTYEVRKKGRAQ 913
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
D L ++ADL++ + + GIIY S K CE + +L ++ G++ + YHA L S
Sbjct: 914 -DALKDIADLITTDYSGKCGIIYCLSRKTCERVAMQLSSKFGVKTAHYHAGLSSKERFAV 972
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK NVRFVIHH + +S+E +YQE+GRAGRDG+ + C L
Sbjct: 973 QRDWQSGRHTVIVATIAFGMGIDKANVRFVIHHSIPQSLEGYYQETGRAGRDGKRSECYL 1032
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D ++ M+ + L ++ +C + T CRR I +YFDE +
Sbjct: 1033 YYAYHDSVSINYMINKNKDTTQEQKHRQRQMLRHVTQFCENITDCRRVQILAYFDEKFKR 1092
Query: 213 TECRGMCDHCR 223
+C CD+C+
Sbjct: 1093 EDCNRTCDNCK 1103
>gi|24646066|ref|NP_524319.2| bloom syndrome helicase ortholog [Drosophila melanogaster]
gi|17366114|sp|Q9VGI8.1|BLM_DROME RecName: Full=Bloom syndrome protein homolog; Short=Dmblm; AltName:
Full=Mutagen-sensitive protein 309; AltName: Full=RecQ
helicase homolog
gi|7299503|gb|AAF54691.1| bloom syndrome helicase ortholog [Drosophila melanogaster]
Length = 1487
Score = 134 bits (337), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 114/213 (53%), Gaps = 33/213 (15%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD+++ + + ++ SGIIY S KEC++ +++ G+R +YHA L
Sbjct: 935 RVLPKKGVSTLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTD 994
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
++AFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG
Sbjct: 995 TDRESRQKDWLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGD 1054
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASY 205
+A CILYY D+ ++ M+ D L NLY IV YC + T CRRA Y
Sbjct: 1055 VADCILYYNYSDMLRIKKML-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDY 1113
Query: 206 FDEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
F E ++ +C CD+C +R K VD
Sbjct: 1114 FGEHFTSEQCLENRETACDNCI-NKRAYKAVDA 1145
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V ++AFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 1004 WLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 1044
>gi|395502424|ref|XP_003755581.1| PREDICTED: Bloom syndrome protein [Sarcophilus harrisii]
Length = 1445
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 74/194 (38%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 911 DCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQH 966
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+
Sbjct: 967 KWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGEMSHCLLF 1026
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSD 212
Y DV +L ++ +QT NLY++V YC + CRR + SYF E+ ++
Sbjct: 1027 YNYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCENIIECRRIQLLSYFGESGFNP 1086
Query: 213 TECRG----MCDHC 222
C+ CD+C
Sbjct: 1087 NFCKEYPDVTCDNC 1100
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 980 TIAFGMGIDKPDVRYVIHSSLPKSVEGYYQ 1009
>gi|387791080|ref|YP_006256145.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379653913|gb|AFD06969.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 729
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 114/202 (56%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K K+ L E+ + + ++GIIY S K+ E++ E L G++ YHA
Sbjct: 212 FYEIRPK----KNELKEIIKYIKSQ-NGKAGIIYCLSRKKVEEVAETLNVNGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++N +IAFG+GIDKP+VRFVIH+ + KSME +YQE+GRAG
Sbjct: 267 GLDANTRATTQDKFLMEDVQVIVATIAFGMGIDKPDVRFVIHYDMPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +CI +Y D+ KL+ + D+ + G L ++ Y + + CRR I Y
Sbjct: 327 RDGGEGNCIAFYDQKDIDKLAKFMKDKPVSEREIGTQILKEVIDYA-ESSVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E+++++ C MCD+CR +
Sbjct: 386 FGESYNESSCSNMCDNCRSPKE 407
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KSME +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDMPKSMEGYYQ 320
>gi|345486372|ref|XP_001605988.2| PREDICTED: Bloom syndrome protein homolog [Nasonia vitripennis]
Length = 1211
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 73/185 (39%), Positives = 102/185 (55%), Gaps = 30/185 (16%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
DL+ +F N GIIY S +C++L E L+ G++ +YHA L+ V
Sbjct: 740 DLIKTKFPNDCGIIYCFSRNDCDNLAEALKKEGIQALSYHAGLDDKVRTDRQIQWVSEKV 799
Query: 115 -----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GIDKPNVR+VIH + KS+E +YQESGRAGRDG+ A CIL Y D+ +
Sbjct: 800 KVICATIAFGMGIDKPNVRYVIHATMPKSIEGYYQESGRAGRDGEPADCILLYNYSDMHR 859
Query: 170 LSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----RG 217
+M+ + T L NL+ IV +C + CRRA+ +YF E + C
Sbjct: 860 YRTMMESNEYANKEALKTHLDNLFKIVHFCENMADCRRALQLNYFGEMFDRQLCIANMET 919
Query: 218 MCDHC 222
CD+C
Sbjct: 920 TCDNC 924
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVR+VIH + KS+E +YQ
Sbjct: 805 TIAFGMGIDKPNVRYVIHATMPKSIEGYYQ 834
>gi|426248114|ref|XP_004017810.1| PREDICTED: Bloom syndrome protein [Ovis aries]
Length = 1429
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 101/175 (57%), Gaps = 31/175 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + E L+N GL AYHA L +
Sbjct: 889 DCLE----WIRKYHPHDSGIIYCLSRRECDTMAETLQNDGLAALAYHAGLSDSARDEVQH 944
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HCIL+
Sbjct: 945 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILF 1004
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE 208
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E
Sbjct: 1005 YAYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGE 1059
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 957 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 987
>gi|261195180|ref|XP_002623994.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
gi|239587866|gb|EEQ70509.1| RecQ family helicase MusN [Ajellomyces dermatitidis SLH14081]
Length = 1562
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 126/252 (50%), Gaps = 40/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ E F Y+VR KP
Sbjct: 846 LGNTRTKFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKG- 904
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRN-RGLRVSAYHAKLESN----- 113
+ + +A+ + + ++GIIY S + CE + E+LR+ ++ YHA L SN
Sbjct: 905 TNVVASIAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISI 964
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 965 QRDWQRGKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYL 1024
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + M+ D+ G + L ++V +C + T CRR + +YF+E +
Sbjct: 1025 YYGFQDTASIRHMI-DKGEGSSEQKSRQHRMLRHVVQFCENWTDCRRVQVLTYFNEKFKK 1083
Query: 213 TECRGMCDHCRG 224
C CD+C+
Sbjct: 1084 ENCNRSCDNCKA 1095
>gi|221487894|gb|EEE26126.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 932
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 80/204 (39%), Positives = 112/204 (54%), Gaps = 34/204 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--Y 106
FY V KP ++ + +AD + + F QSGI+Y + KE E L L+ R R+S Y
Sbjct: 387 FYHVVHKPKTSEEQIRLIADFI-KAFNGQSGILYCLTRKEAETLCVALK-RDFRISCAFY 444
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H L++N ++AFG+GI+K +VRFV+HH L KS++N+YQE+GR
Sbjct: 445 HGDLDANSRLEIHRQWSTGYISVVVATVAFGMGINKADVRFVVHHSLPKSLDNYYQETGR 504
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYC----------LDQTRCR 198
AGRDG AHC+L YR DV + S MV+ + +GL LY +V +C RCR
Sbjct: 505 AGRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRFCSGLEPLRSGTWSGRRCR 564
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R I ++F +A C MCD C
Sbjct: 565 REAICAHFGDA--AVSCERMCDQC 586
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T + V ++AFG+GI+K +VRFV+HH L KS++N+YQ
Sbjct: 460 WSTGYISVVVATVAFGMGINKADVRFVVHHSLPKSLDNYYQ 500
>gi|239610645|gb|EEQ87632.1| RecQ family helicase MusN [Ajellomyces dermatitidis ER-3]
gi|327348921|gb|EGE77778.1| RecQ family helicase MusN [Ajellomyces dermatitidis ATCC 18188]
Length = 1562
Score = 134 bits (336), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 126/252 (50%), Gaps = 40/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENF----------YQVRIKPAAQ 59
L RT F + + NV+ VIH+ E F Y+VR KP
Sbjct: 846 LGNTRTKFPGIPLMALTATATENVKVDVIHNLGMHDAEVFVQSFNRPNLIYEVRRKPKG- 904
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRN-RGLRVSAYHAKLESN----- 113
+ + +A+ + + ++GIIY S + CE + E+LR+ ++ YHA L SN
Sbjct: 905 TNVVASIAETIKGSYSGKAGIIYCLSRQSCERVAEQLRDTHKIKAVHYHAGLPSNDRISI 964
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L
Sbjct: 965 QRDWQRGKYNVIVATIAFGMGIDKPDVRFVIHHSMPKSLEGYYQETGRAGRDGERSGCYL 1024
Query: 161 YYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY D + M+ D+ G + L ++V +C + T CRR + +YF+E +
Sbjct: 1025 YYGFQDTASIRHMI-DKGEGSSEQKSRQHRMLRHVVQFCENWTDCRRVQVLTYFNEKFKK 1083
Query: 213 TECRGMCDHCRG 224
C CD+C+
Sbjct: 1084 ENCNRSCDNCKA 1095
>gi|388858117|emb|CCF48354.1| related to RecQ family helicase RecQL1 [Ustilago hordei]
Length = 782
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 109/205 (53%), Gaps = 27/205 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLRVSAY 106
YQV +P K + + D + +SGI+Y S + E + E+ N + Y
Sbjct: 354 YQVVQRPKEAKAASEAIVDYILEHHAGESGIVYCLSRPDTEATAKALTEISNGRIATGHY 413
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L+ +IAFG+GIDKPNVRFVIH C+SKS++ +YQE+GR
Sbjct: 414 HAGLDDASKQLIHTHWRTGQIQVVCATIAFGMGIDKPNVRFVIHACISKSLDGYYQETGR 473
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDGQ + C+L+YR D ++SS V + TG L ++ Y RCRR + A YF +
Sbjct: 474 AGRDGQDSDCVLFYRPQDCVRVSSFVASEPTGQEKLSAMLEYA-QSARCRRWLFAEYFSD 532
Query: 209 AWSDTECR-----GMCDHCRGGRRD 228
+ + + G+CD+C G R+D
Sbjct: 533 MFDKGDAQRQRACGICDNCTGQRQD 557
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/41 (65%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WRT QV +IAFG+GIDKPNVRFVIH C+SKS++ +YQ
Sbjct: 429 WRTGQIQVVCATIAFGMGIDKPNVRFVIHACISKSLDGYYQ 469
>gi|406603614|emb|CCH44869.1| bloom syndrome protein [Wickerhamomyces ciferrii]
Length = 1521
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 69/211 (32%), Positives = 110/211 (52%), Gaps = 29/211 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V K KD + + + +F++Q+GIIY S CE ++L N G++ + YHA
Sbjct: 902 FYEVLNK---DKDHMKHIEMSILGKFKDQTGIIYCHSKNACEQTSDKLINSGIKCAFYHA 958
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDK +VRFVIH L +++E +YQE+GRAG
Sbjct: 959 GMTPEDRLDIQKAWQNGTIKVICATIAFGMGIDKADVRFVIHLTLPRTLEGYYQETGRAG 1018
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++C ++Y D L +M+ ++ L L ++ YC + T CRR +
Sbjct: 1019 RDGNYSYCTMFYGFRDARTLQNMISRDKDLDKAGKEKHLTKLRQVIQYCENSTDCRRQQV 1078
Query: 203 ASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
YF+E + +C CD+C+ G + + D
Sbjct: 1079 LQYFNEQFHKDQCAKNCDNCKKGSDASTKFD 1109
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK +VRFVIH L +++E +YQ
Sbjct: 983 TIAFGMGIDKADVRFVIHLTLPRTLEGYYQ 1012
>gi|348679514|gb|EGZ19330.1| hypothetical protein PHYSODRAFT_491373 [Phytophthora sojae]
Length = 400
Score = 133 bits (335), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 72/210 (34%), Positives = 118/210 (56%), Gaps = 29/210 (13%)
Query: 50 YQVRIKP-AAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
++VR KP + ++ L +L+S+ + R+ GI+Y + ++ ED+ L +RGL YH
Sbjct: 188 FEVRDKPLGSDVKAMEALYELISKTYPRDAVGIVYCMTKQDSEDVANYLFDRGLSADFYH 247
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A + +IA+G+GI+KP+VR+VIH ++KS+E +YQE+GRA
Sbjct: 248 AGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRA 307
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRA 200
GRDG+ + CI++Y D+ K+ S++F Q G+ L + YC D T CRR
Sbjct: 308 GRDGKPSQCIIFYSARDISKMRSILFMPQKGMTKQTRAVHMEKLRAMAEYCEDDTTCRRQ 367
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRRDAK 230
+ SYF + + ++C CD+CR +R A+
Sbjct: 368 QLISYFGQKFQRSDCNRTCDNCRRTQRAAR 397
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IA+G+GI+KP+VR+VIH ++KS+E +YQ
Sbjct: 272 ATIAYGMGINKPDVRYVIHFSVAKSIEGYYQ 302
>gi|295673364|ref|XP_002797228.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282600|gb|EEH38166.1| ATP-dependent DNA helicase Q1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1550
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 124/228 (54%), Gaps = 38/228 (16%)
Query: 33 NVRF-VIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
NV+ VIH+ ++ E F Y+VR KP + ++ +A+ ++ + Q+GII
Sbjct: 870 NVKIDVIHNLGMRNAEVFVQSFNRPNLTYEVRPKPK-NTNVIESIAETINESYSGQAGII 928
Query: 82 YTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLGI 122
Y S + CE + +LR++ ++ + YHA L S +IAFG+GI
Sbjct: 929 YCLSRQSCEKVAAQLRDKYKIKAAHYHAGLPSEERISIQRDWQSGKYNVIVATIAFGMGI 988
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------FD 176
DK +VRFVIHH + KS+E +YQE+GRAGRDG+ + C LYY D L M+ F+
Sbjct: 989 DKADVRFVIHHTIPKSLEGYYQETGRAGRDGKRSGCYLYYGFQDTGPLRHMIDKGEGSFE 1048
Query: 177 QQTGLAN-LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Q+ L ++V +C +++ CRR I +YF+E + C CD+C+
Sbjct: 1049 QKKRQRQMLRHVVQFCENESDCRRVQILAYFNEKFERENCNRSCDNCK 1096
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W++ Y V +IAFG+GIDK +VRFVIHH + KS+E +YQ
Sbjct: 970 WQSGKYNVIVATIAFGMGIDKADVRFVIHHTIPKSLEGYYQ 1010
>gi|195329754|ref|XP_002031575.1| GM26077 [Drosophila sechellia]
gi|194120518|gb|EDW42561.1| GM26077 [Drosophila sechellia]
Length = 1268
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 113/213 (53%), Gaps = 33/213 (15%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD+++ + + + SGIIY S KEC++ +++ G+R +YHA L
Sbjct: 716 RVLPKKGVSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDGIRAVSYHAGLTD 775
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
++AFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG
Sbjct: 776 TERESRQKDWLTGKIRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGD 835
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASY 205
+A CILYY D+ ++ M+ D L NLY IV YC + T CRRA Y
Sbjct: 836 MADCILYYNYSDMLRIKKML-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDY 894
Query: 206 FDEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
F E ++ +C CD+C +R K VD
Sbjct: 895 FGEHFTSEQCLENRETACDNCI-NKRAYKAVDA 926
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V ++AFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 785 WLTGKIRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 825
>gi|367019938|ref|XP_003659254.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
gi|347006521|gb|AEO54009.1| hypothetical protein MYCTH_2296042 [Myceliophthora thermophila ATCC
42464]
Length = 1843
Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats.
Identities = 74/204 (36%), Positives = 108/204 (52%), Gaps = 30/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+YQV K Q + + +L++ RF Q GI+YT S K E + L ++ G++ YH
Sbjct: 1116 YYQVIYK---QSRFIRGMGELINERFPGQCGIVYTLSRKSAEGTAQALVSKHGIKARYYH 1172
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A+++ +IAFG+GIDKP+VRFVIH L KS+E +YQE+GRA
Sbjct: 1173 AQMDPESKLEVQEQWQAGEIHVVVATIAFGMGIDKPDVRFVIHQSLPKSLEGYYQETGRA 1232
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAI 201
GRDG+ + CILY+ D+ L M+ + + + L +V+YC CRR
Sbjct: 1233 GRDGKPSECILYFAYHDIPALRRMINEDKDKDKDEKERQHQMLNRMVNYCETSHTCRRVQ 1292
Query: 202 IASYFDEAWSDTECRGMCDHCRGG 225
I YF E + +C MCD+C G
Sbjct: 1293 ILRYFGERFDAADCNNMCDNCANG 1316
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 1198 TIAFGMGIDKPDVRFVIHQSLPKSLEGYYQ 1227
>gi|110225360|ref|NP_001035992.1| Bloom syndrome protein homolog isoform 2 [Mus musculus]
gi|5921178|sp|O88700.1|BLM_MOUSE RecName: Full=Bloom syndrome protein homolog; Short=mBLM; AltName:
Full=RecQ helicase homolog
gi|3452495|emb|CAB10933.1| BLM protein [Mus musculus]
gi|162318414|gb|AAI57096.1| Bloom syndrome homolog (human) [synthetic construct]
Length = 1416
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 898 SGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 957
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 958 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1017
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1018 DGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNC 1074
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 953 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 983
>gi|148675035|gb|EDL06982.1| Bloom syndrome homolog (human), isoform CRA_a [Mus musculus]
Length = 1420
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 902 SGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 961
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 962 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1021
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1022 DGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNC 1078
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 957 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 987
>gi|148675036|gb|EDL06983.1| Bloom syndrome homolog (human), isoform CRA_b [Mus musculus]
Length = 1417
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 899 SGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 958
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 959 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1018
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1019 DGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNC 1075
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 954 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 984
>gi|3370996|dbj|BAA32001.1| mBlm [Mus musculus]
Length = 1416
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 898 SGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 957
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 958 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1017
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1018 DGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNC 1074
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 953 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 983
>gi|25145561|ref|NP_502390.2| Protein HIM-6 [Caenorhabditis elegans]
gi|28201770|sp|O18017.2|BLM_CAEEL RecName: Full=Bloom syndrome protein homolog; AltName: Full=High
incidence of males protein 6; AltName: Full=RecQ
helicase homolog
gi|20853750|gb|AAM26298.1| RecQ helicase [Caenorhabditis elegans]
gi|22859109|emb|CAB05609.2| Protein HIM-6 [Caenorhabditis elegans]
Length = 988
Score = 133 bits (334), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 112/205 (54%), Gaps = 29/205 (14%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV- 114
P A + ++ + + M + + +SGI+Y S KECE ++ L GL YHA L N+
Sbjct: 450 PKAARSLIN-VVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLR 508
Query: 115 -----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG ++
Sbjct: 509 VSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSY 568
Query: 158 CILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
C++ Y D +L M+ + T L N+ +V+YC + + CRR ++ +F E +
Sbjct: 569 CLMLYSYHDSIRLRRMIEEGNTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVY 628
Query: 211 SDTECRG---MCDHCRGGRRDAKRV 232
+ CR CD C R++A+ +
Sbjct: 629 DEQSCRNSKTPCDICERQRKNAEAI 653
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 525 ATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 555
>gi|226693393|ref|NP_031576.4| Bloom syndrome protein homolog isoform 1 [Mus musculus]
Length = 1419
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 901 SGIIYCLSRRECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 960
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 961 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1020
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1021 DGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNC 1077
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 956 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 986
>gi|255719436|ref|XP_002555998.1| KLTH0H02706p [Lachancea thermotolerans]
gi|238941964|emb|CAR30136.1| KLTH0H02706p [Lachancea thermotolerans CBS 6340]
Length = 1403
Score = 133 bits (334), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 111/201 (55%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V K K+ + ++ + + RF+NQ+GIIY S CE L+ G+ + YHA
Sbjct: 834 YYEVLKK---SKNVVFDICNAVKTRFKNQTGIIYCHSKNSCEQTASLLQRNGINSAYYHA 890
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+E + ++AFG+GIDKP+VRFV H + +++E +YQE+GRAG
Sbjct: 891 GMEPDERLEVQQAWQANRIRIICATVAFGMGIDKPDVRFVYHLTIPRTLEGYYQETGRAG 950
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ + CI+YY DV + +M+ +++ L L ++ YC + CRR ++
Sbjct: 951 RDGKFSFCIMYYTFRDVRTMQTMIQKDKNLDRENKEKHLTKLQQVMQYCENLADCRRQLV 1010
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E + CR CD+C+
Sbjct: 1011 LSYFNENFDSALCRRNCDNCK 1031
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV H + +++E +YQ
Sbjct: 914 ATVAFGMGIDKPDVRFVYHLTIPRTLEGYYQ 944
>gi|343425568|emb|CBQ69103.1| related to RecQ family helicase RecQL1 [Sporisorium reilianum SRZ2]
Length = 791
Score = 133 bits (334), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 72/204 (35%), Positives = 108/204 (52%), Gaps = 27/204 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLRVSA 105
YQV +P + + D + + SGI+Y S + E E+ N ++
Sbjct: 353 LYQVVQRPQQANAAAEAMVDYILQHHAGHSGIVYCLSQADTEATATSLTEISNGRIKTGR 412
Query: 106 YHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESG 147
YHA L+ +IAFG+GIDKP+VRFVIH C+SKS++ +YQE+G
Sbjct: 413 YHAGLDDQSKQAIHTDWRTGRIQVVCATIAFGMGIDKPDVRFVIHACISKSLDGYYQETG 472
Query: 148 RAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
RAGRDGQ + C+L+YR D ++SS+V + TG L ++ Y RCRR + A YF
Sbjct: 473 RAGRDGQNSDCVLFYRPQDAIRMSSLVAGEPTGQEKLSAMLEYA-QSARCRRQLFAEYFS 531
Query: 208 EAWSDTECR-----GMCDHCRGGR 226
+ + ++ + G+CD+C G R
Sbjct: 532 DMFDKSDDQRQRVCGICDNCTGNR 555
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WRT QV +IAFG+GIDKP+VRFVIH C+SKS++ +YQ
Sbjct: 429 WRTGRIQVVCATIAFGMGIDKPDVRFVIHACISKSLDGYYQ 469
>gi|403411346|emb|CCL98046.1| predicted protein [Fibroporia radiculosa]
Length = 862
Score = 132 bits (333), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 76/215 (35%), Positives = 109/215 (50%), Gaps = 30/215 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y V KP + K+ ++ +AD + + + SGIIY S K+ E + E+L R ++ YHA
Sbjct: 389 YSVLPKPMSHKEMMNAMADYIMKHHADHSGIIYCLSKKDAETVSEDLSERRIKTGVYHAD 448
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ + +IAFGLGIDK +VRFV+HH + KS++ YQESGRAGR
Sbjct: 449 IGDSQKETLHQRWRQGLVKVVCATIAFGLGIDKGDVRFVLHHTIPKSVQGLYQESGRAGR 508
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF----- 206
DG A C+LYYR D +LS + ++ A +++I+ + T CR + A YF
Sbjct: 509 DGHDADCVLYYRPQDFTRLSQLTVQEKGSRAKIHDILRFAQTLTECRNILFAKYFSSSSQ 568
Query: 207 -------DEAWSDTECRGMCDHCRGGRRDAKRVDV 234
E E G CD+C G R DV
Sbjct: 569 ISMSSWSTEEKGALEPCGHCDNCTRGSDGFVRRDV 603
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH + KS++ YQ
Sbjct: 461 WRQGLVKVVCATIAFGLGIDKGDVRFVLHHTIPKSVQGLYQ 501
>gi|328864030|gb|EGG13129.1| hypothetical protein MELLADRAFT_46354 [Melampsora larici-populina
98AG31]
Length = 498
Score = 132 bits (333), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 113/202 (55%), Gaps = 28/202 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG-LRVSAYHA 108
Y+VR K K+ +++L +++ + GI+Y S ++CE + +L +RG +R YHA
Sbjct: 223 YEVRNK---TKEAMNDLIRIITVDHAGKCGIVYCFSKRDCEQVASDLVSRGNVRAHHYHA 279
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +N +IAFG+GIDKP+VRFV+H+ L S+E +YQE+GRAG
Sbjct: 280 GMSTNDRQRIQQDWQRGVLQVLCATIAFGMGIDKPDVRFVVHYSLPSSLEGYYQETGRAG 339
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ------QTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG + CIL+Y D + MV + + L N +V++CL++ CRR +
Sbjct: 340 RDGGPSECILFYTYRDFLGIQRMVEQEPNVQQVERRLVNARRVVAFCLNKLDCRRMQVLD 399
Query: 205 YFDEAWSDTECRGMCDHCRGGR 226
YF E +S +CR CD+C G+
Sbjct: 400 YFSEKFSPADCRKTCDNCMRGQ 421
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV +IAFG+GIDKP+VRFV+H+ L S+E +YQ
Sbjct: 293 WQRGVLQVLCATIAFGMGIDKPDVRFVVHYSLPSSLEGYYQ 333
>gi|345564877|gb|EGX47836.1| hypothetical protein AOL_s00083g48 [Arthrobotrys oligospora ATCC
24927]
Length = 1720
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 63/195 (32%), Positives = 105/195 (53%), Gaps = 26/195 (13%)
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------- 113
+ ++ +L+ ++ + GI+Y S +CE + L+ + + YHA L ++
Sbjct: 1096 VQDIINLIQTSYKGKCGIVYCLSKNDCEQVSSHLQKARILANFYHAGLTTDERRNVQKRW 1155
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+I+ C L+Y
Sbjct: 1156 QCGELKVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKISGCYLFYSG 1215
Query: 165 PDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D+ ++ M+ F G + + +YC ++ CRR + YF E + +C+
Sbjct: 1216 NDMMRILKMIETGEGATDFTIDHGKTMVRAVANYCDNKVECRRMQVLRYFAERYDPADCK 1275
Query: 217 GMCDHCRGGRRDAKR 231
CD+C+ G + R
Sbjct: 1276 KTCDNCKSGIKYTPR 1290
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 1166 TIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1195
>gi|255531959|ref|YP_003092331.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
gi|255344943|gb|ACU04269.1| ATP-dependent DNA helicase RecQ [Pedobacter heparinus DSM 2366]
Length = 729
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 78/202 (38%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K +D L E+ + +SGIIY S K+ E++ E L G++ YHA
Sbjct: 212 FYEIRPK----RDVLKEIIRYIKYN-TGKSGIIYCLSRKKVEEVAESLNLNGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE V +IAFG+GIDKP+VRFVIHH + KSME +YQE+GRAG
Sbjct: 267 GLEPKVRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGVCIAFYAQKDVDKLAKFMKDKPVSEREIGTQILKEVIDYA-ESGVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++T C MCD+C+ ++
Sbjct: 386 FGENFNETGCNCMCDNCKKPKK 407
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 14/85 (16%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ------------VRIKPAAQKDCLDELADL 69
+IAFG+GIDKP+VRFVIHH + KSME +YQ V I AQKD +D+LA
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKD-VDKLAKF 349
Query: 70 MSRRFRNQSGIIYTTSIKECEDLRE 94
M + ++ I T +KE D E
Sbjct: 350 MKDKPVSERE-IGTQILKEVIDYAE 373
>gi|148236484|ref|NP_001079095.1| Bloom syndrome protein homolog [Xenopus laevis]
gi|17366056|sp|Q9DEY9.1|BLM_XENLA RecName: Full=Bloom syndrome protein homolog; Short=xBLM; AltName:
Full=RecQ helicase homolog
gi|11120568|gb|AAG30928.1|AF307841_1 Bloom's syndrome-like protein [Xenopus laevis]
Length = 1364
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 131/265 (49%), Gaps = 42/265 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQV---------RIKPAAQKD 61
LN+ R F V + P V+ I + L + + + + P K
Sbjct: 766 LNVLRQKFQSVPMMALTATANPRVKKDILNQLKMTKPQIFTMSFNRDNLKYEVLPKKPKR 825
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + N SGIIY S EC+ + + L+ GL AYHA L +SN
Sbjct: 826 VALDCVEWIKKHHPNDSGIIYCLSRHECDTMADTLQKEGLAALAYHAGLADSNRDYVQHK 885
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+ +HC+L+Y
Sbjct: 886 WINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSHCLLFY 945
Query: 163 RLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDT 213
DV ++ ++ +QT NLY++V YC + CRR + SYF E ++
Sbjct: 946 SYHDVTRIRRLIQMEKDGNSHTKQTHFNNLYSMVHYCENVVECRRMQLLSYFGENNFNPN 1005
Query: 214 ECRG----MCDHCRGGRRDAKRVDV 234
C+ CD+C G+++ K DV
Sbjct: 1006 FCKEHTQVACDNCL-GKKNYKSRDV 1029
>gi|341891934|gb|EGT47869.1| hypothetical protein CAEBREN_30811 [Caenorhabditis brenneri]
Length = 978
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 111/205 (54%), Gaps = 29/205 (14%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV- 114
P A K ++ + + M + + +SGI+Y S KECE ++ L GL YHA L N+
Sbjct: 441 PKAAKSLVN-VVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLR 499
Query: 115 -----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG ++
Sbjct: 500 VSVQKSWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSY 559
Query: 158 CILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
C++ Y D +L M+ + T L N+ +V+YC + + CRR ++ +F E +
Sbjct: 560 CLMLYSYHDSIRLRRMIEEGNTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVY 619
Query: 211 SDTECRG---MCDHCRGGRRDAKRV 232
+ CR CD C R++ + +
Sbjct: 620 DEQSCRNSKTPCDICERQRKNVEAI 644
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + + V +IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 506 WLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 546
>gi|380797039|gb|AFE70395.1| Bloom syndrome protein, partial [Macaca mulatta]
Length = 786
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 37/207 (17%)
Query: 49 FYQVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y + KP DCL+ + + + SGIIY S +EC+ + + L+ GL AYH
Sbjct: 233 YYVLPKKPKKVAFDCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYH 288
Query: 108 AKLESNV-------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
A L + +IAFG+GIDKP+VRFVIH L KSME +YQESGR
Sbjct: 289 AGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGR 348
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC+L+Y DV +L ++ ++ G NLY++V YC + T CRR
Sbjct: 349 AGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRI 408
Query: 201 IIASYFDE-AWSDTECRG----MCDHC 222
+ +YF E ++ C+ CD+C
Sbjct: 409 QLLAYFGENGFNPDFCKKHPDVSCDNC 435
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 314 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 344
>gi|402875293|ref|XP_003901445.1| PREDICTED: Bloom syndrome protein-like [Papio anubis]
Length = 1042
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 79/207 (38%), Positives = 113/207 (54%), Gaps = 37/207 (17%)
Query: 49 FYQVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y + KP DCL+ + + + SGIIY S +EC+ + + L+ GL AYH
Sbjct: 489 YYVLPKKPKKVAFDCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYH 544
Query: 108 AKLESNV-------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
A L + +IAFG+GIDKP+VRFVIH L KSME +YQESGR
Sbjct: 545 AGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGR 604
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC+L+Y DV +L ++ ++ G NLY++V YC + T CRR
Sbjct: 605 AGRDGEISHCLLFYTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRI 664
Query: 201 IIASYFDE-AWSDTECRG----MCDHC 222
+ +YF E ++ C+ CD+C
Sbjct: 665 QLLAYFGENGFNPDFCKKHPDVSCDNC 691
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 570 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 600
>gi|296204062|ref|XP_002749167.1| PREDICTED: Bloom syndrome protein isoform 2 [Callithrix jacchus]
Length = 1415
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLSALAYHAGLSDSARDEIQQ 931
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 932 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 991
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 992 YTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1051
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1052 DFCKKHADVSCDNC 1065
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 944 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 974
>gi|121710174|ref|XP_001272703.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
gi|119400853|gb|EAW11277.1| RecQ family helicase MusN [Aspergillus clavatus NRRL 1]
Length = 1542
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 109/200 (54%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + +D +A+ + + N+SGI+Y S K CE + E L ++ ++ YHA
Sbjct: 915 YEVRQK-GKSSEVMDSIANTIKTSYPNKSGIVYCLSRKACESVAEILASKYKIKADFYHA 973
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ S +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 974 GVASAKRAEVQERWQTGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAG 1033
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C LYY D L SM+ D+ G L N++ YCL+ CRR I
Sbjct: 1034 RDGKRSGCYLYYSYRDYTSLQSMI-DKGEGSNEQKTRQRQMLRNVMQYCLNPADCRRVQI 1092
Query: 203 ASYFDEAWSDTECRGMCDHC 222
+YF+E + +C CD C
Sbjct: 1093 LAYFNEYFRQADCNRSCDVC 1112
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 987 WQTGRVHVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1027
>gi|358054726|dbj|GAA99652.1| hypothetical protein E5Q_06355 [Mixia osmundae IAM 14324]
Length = 768
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 111/220 (50%), Gaps = 35/220 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLR---EELRNRGLRVSAY 106
Y V+ KPA+ ++E+ D + R QSGI+Y S K+ E EE G+ A+
Sbjct: 371 YTVKAKPASPPALVEEMVDFIQEYHRGQSGIVYCLSQKDTETTAQAIEEASKGGIVARAF 430
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA LE +IAFGLG+D P+ RFV HH LSK+++ + QESGR
Sbjct: 431 HAGLEDAEKERCHRKWRNKSIQVICATIAFGLGVDSPDCRFVFHHSLSKNLDAYLQESGR 490
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
+GRDG+ A C+L+YR D+ +++S+V + G L ++SY D CR+ I A YF +
Sbjct: 491 SGRDGRDASCVLWYRSQDIPRMASLVATDRDGSRKLGTMISYASDLKTCRKLIFARYFAD 550
Query: 209 --------------AWSDTECRGMCDHCRGGRRDAKRVDV 234
++ E G CD+C D VD+
Sbjct: 551 THGSAMGFAANSRTGIAEAEACGHCDNCLRSPGDVSTVDI 590
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV +IAFGLG+D P+ RFV HH LSK+++ + Q
Sbjct: 446 WRNKSIQVICATIAFGLGVDSPDCRFVFHHSLSKNLDAYLQ 486
>gi|440636643|gb|ELR06562.1| hypothetical protein GMDG_08035 [Geomyces destructans 20631-21]
Length = 1823
Score = 132 bits (332), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 112/199 (56%), Gaps = 27/199 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR KP ++ + + ++++++++ Q+GIIY S K CE + +EL R ++ YHA
Sbjct: 1085 YEVRPKPK-HEELMKSIVEIITKKYKGQTGIIYALSRKNCEKVADELSTRYNIKACHYHA 1143
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +IAFG+GIDK NVRFVIH + KS+E +YQE+GRAG
Sbjct: 1144 ALKPIEKKRVQQDWQAGKWQVIVATIAFGMGIDKANVRFVIHQTMPKSLEGYYQETGRAG 1203
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYNIVS-YCLDQTRCRRAIIA 203
RDG+++ C LYY D L + D Q+ ++ N +S +C ++ CRR +
Sbjct: 1204 RDGKLSGCYLYYGYQDTTVLRKFIEDGDGSHEQKDRQRSMLNRMSQFCENRVDCRRVEVL 1263
Query: 204 SYFDEAWSDTECRGMCDHC 222
+YF E + +C G CD+C
Sbjct: 1264 AYFGERFQKEDCNGTCDNC 1282
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +QV +IAFG+GIDK NVRFVIH + KS+E +YQ
Sbjct: 1157 WQAGKWQVIVATIAFGMGIDKANVRFVIHQTMPKSLEGYYQ 1197
>gi|379642609|ref|NP_001243837.1| Bloom syndrome, RecQ helicase-like [Xenopus (Silurana) tropicalis]
Length = 1327
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 88/265 (33%), Positives = 130/265 (49%), Gaps = 42/265 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
LN+ R F V + P V+ I + L + + + + P K
Sbjct: 730 LNMLRQKFQSVPMMALTATANPRVQKDILNQLKMTKPQIFTMSFNRDNLKYDVLPKKPKR 789
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + N SGIIY S EC+ + + L+ GL AYHA L +SN
Sbjct: 790 VALDCVEWIKKYHPNDSGIIYCLSRHECDTMADTLQKGGLAALAYHAGLADSNRDYVQHK 849
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+I+HC+L+Y
Sbjct: 850 WINQDDCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCLLFY 909
Query: 163 RLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-----A 209
DV ++ ++ +QT NLY++V YC + CRR + +YF E
Sbjct: 910 SYSDVTRIRRLIQMEKDGNSHTKQTHFNNLYSMVHYCENVVECRRMQLLAYFGENNFNPN 969
Query: 210 WSDTECRGMCDHCRGGRRDAKRVDV 234
+ R CD+C GR++ K +V
Sbjct: 970 FCKENTRVSCDNCL-GRKEFKSRNV 993
>gi|383420697|gb|AFH33562.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQ 931
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 932 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 991
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 992 YTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1051
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1052 DFCKKHPDVSCDNC 1065
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 944 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 974
>gi|109082375|ref|XP_001097543.1| PREDICTED: Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQ 931
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 932 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 991
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 992 YTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1051
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1052 DFCKKHPDVSCDNC 1065
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 944 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 974
>gi|355692996|gb|EHH27599.1| Bloom syndrome protein [Macaca mulatta]
Length = 1416
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQ 931
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 932 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 991
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 992 YTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1051
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1052 DFCKKHPDVSCDNC 1065
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 944 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 974
>gi|374853612|dbj|BAL56515.1| ATP-dependent DNA helicase RecQ [uncultured Bacteroidetes
bacterium]
Length = 717
Score = 132 bits (331), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 114/208 (54%), Gaps = 24/208 (11%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+YQ+ K + Q L E+ + R Q+GI+Y S + ED+ L+ G++ YHA
Sbjct: 205 YYQITPKRSHQA-TLKEIVQYIRSR-PGQAGIVYCHSRRRVEDVANILQANGIKALPYHA 262
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VRFVIH + KS+EN+YQE+GRAG
Sbjct: 263 GMDAATRTRNQDAFLNEEIQVIVATIAFGMGIDKPDVRFVIHFDVPKSIENYYQETGRAG 322
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD----QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
RDG A CILYY D+ KL + D ++ + L ++Y + +CRR + YF
Sbjct: 323 RDGLPADCILYYDYNDILKLDRFLKDKPASEREAIVFLLQEMAYFCETGQCRRKFLLQYF 382
Query: 207 DEAWSDTECRGMCDHCRGGRRDAKRVDV 234
E++ +C GMCD+CR ++ + D+
Sbjct: 383 GESYDTHKCNGMCDNCRYPKQSIEGKDI 410
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + KS+EN+YQ
Sbjct: 287 TIAFGMGIDKPDVRFVIHFDVPKSIENYYQ 316
>gi|403258502|ref|XP_003921799.1| PREDICTED: Bloom syndrome protein [Saimiri boliviensis boliviensis]
Length = 1499
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQ 931
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 932 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 991
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSD 212
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E ++
Sbjct: 992 YTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1051
Query: 213 TECRG----MCDHC 222
C+ CD+C
Sbjct: 1052 DFCKEHPDVSCDNC 1065
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 944 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 974
>gi|355778305|gb|EHH63341.1| Bloom syndrome protein [Macaca fascicularis]
Length = 1338
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 856 DCLE----WIRKHYPYDSGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQ 911
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+
Sbjct: 912 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLF 971
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 972 YTYHDVTRLKRLIIMEKDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1031
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1032 DFCKKHPDVSCDNC 1045
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 924 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 954
>gi|375149593|ref|YP_005012034.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
gi|361063639|gb|AEW02631.1| ATP-dependent DNA helicase RecQ [Niastella koreensis GR20-10]
Length = 763
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 100/172 (58%), Gaps = 25/172 (14%)
Query: 74 FRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------S 115
+ +SGIIYT + K E+L + L G++ AYHA L+S + +
Sbjct: 266 MKGKSGIIYTLNRKTTEELADMLMANGIKAVAYHAGLDSKLRAERQDLFLNEDVQVIVAT 325
Query: 116 IAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF 175
IAFG+GIDKP++RFVIH + KS+EN+YQE+GRAGRDG CILYY DV KL ++
Sbjct: 326 IAFGMGIDKPDIRFVIHFNIPKSIENYYQETGRAGRDGLEGKCILYYSHKDVSKLEHLMR 385
Query: 176 DQ-----QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
D+ + G + V+Y + CRR I+ SYF E +S+ C G CD+C
Sbjct: 386 DKPLSEREVGAQLISETVAYS-ESGVCRRKILMSYFGEEYSEPNC-GQCDNC 435
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP++RFVIH + KS+EN+YQ
Sbjct: 325 TIAFGMGIDKPDIRFVIHFNIPKSIENYYQ 354
>gi|448111284|ref|XP_004201806.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359464795|emb|CCE88500.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1430
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 127/249 (51%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHC-------LSKSMEN---FYQVRIKPAAQ 59
++L++ F QV + VR ++HH L +S FY+++ K A
Sbjct: 898 MSLFKQQFPQVPVMALTATANEKVRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAA-- 955
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ LD + D + + +N++GIIY S + CE + L G+R S YHA L
Sbjct: 956 -NFLDWIRDYILTKQQNKTGIIYCHSKQSCEVTSDRLNQWGVRCSYYHAGLSPTERFQIQ 1014
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAGRDG + CI++
Sbjct: 1015 TDWQQNRIQVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMF 1074
Query: 162 YRLPDVFKLSSMV-----FD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L +M+ D +++ LA L +V YC + + CRR + YF+E +
Sbjct: 1075 YSYKDARSLQNMIQRDSELDREGKESHLAKLRQVVQYCENTSDCRRKQVLHYFNERFDPA 1134
Query: 214 ECRGMCDHC 222
C CD+C
Sbjct: 1135 HCARKCDNC 1143
>gi|298705316|emb|CBJ49006.1| DNA helicase recq1, putative [Ectocarpus siliculosus]
Length = 678
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/179 (40%), Positives = 100/179 (55%), Gaps = 20/179 (11%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+V KP A K+ L+ LA L+ +R Q+GI+Y S KE D+ L RG+ + YHA
Sbjct: 187 YEVVEKPEAAKESLELLASLIKDSYRGQAGIVYAFSRKEASDVAAGLGARGVPAAFYHAG 246
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
E +IAFG+GI+ VRFV+H LSKS+EN+YQESGRAGR
Sbjct: 247 QEERERSRVQQAWMRGDVPVIVATIAFGMGINHLEVRFVVHFSLSKSLENYYQESGRAGR 306
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQTG--LANLYNIVSYCLDQTRCRRAIIASYFDE 208
DG+ + C+++YR DV + +++ Q LA L+ +V YC CRR +IA E
Sbjct: 307 DGKPSRCVVFYRPSDVSRQATLSCQDQGSQPLATLHKMVRYCQTMATCRRTMIAEALGE 365
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+ VRFV+H LSKS+EN+YQ
Sbjct: 269 ATIAFGMGINHLEVRFVVHFSLSKSLENYYQ 299
>gi|67605840|ref|XP_666710.1| DEAD/DEAH box helicase [Cryptosporidium hominis TU502]
gi|54657750|gb|EAL36476.1| DEAD/DEAH box helicase [Cryptosporidium hominis]
Length = 990
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 52/235 (22%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLM-SRRFRNQSGIIYT 83
F L D+PN++ Y+VR K ++K L+E+ +L+ S RF + IIY
Sbjct: 429 FSLSFDRPNLK--------------YEVRAKSGSKKKMLNEICELLRSPRFCRSTSIIYC 474
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKP 125
S ECE++ ++L G+ + YH ++ + +IAFG+GI+K
Sbjct: 475 LSRNECEEVSKDLNKEGISATYYHGSMKEDKRNLAQRRWMNDEKQVMVATIAFGMGINKK 534
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV----------- 174
+VR VIH + KS+EN+YQESGRAGRDG + CILYY DV +L ++
Sbjct: 535 DVRLVIHLSMPKSLENYYQESGRAGRDGLESKCILYYSYKDVSRLQTLAGVNIEKPSKKY 594
Query: 175 -------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ ++ + L +V YC +Q +CRR +I S+F E + +C+ CD+C
Sbjct: 595 YTSKNNSSNNKSTIDGLLGMVKYCEEQYKCRRTMILSHFGEDFKG-KCKVKCDNC 648
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+K +VR VIH + KS+EN+YQ
Sbjct: 513 WMNDEKQVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQ 553
>gi|402225561|gb|EJU05622.1| ATP-dependent DNA helicase, partial [Dacryopinax sp. DJM-731 SS1]
Length = 476
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 103/199 (51%), Gaps = 28/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y VR KP + + + ++ RN +GIIY S K+CE++ ELR+ GL YHA
Sbjct: 188 YSVRKKPPG--NLVANIYGFINSCHRNDAGIIYCLSRKKCEEVAAELRDTFGLPARHYHA 245
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ N +IAFG+GIDKP+VR+VIHH L KS+E +YQE+GRAG
Sbjct: 246 GMNKNDRLRTQESWKHNEFKVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQETGRAG 305
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA-------NLYNIVSYCLDQTRCRRAIIA 203
RDG + CILYY D + + +L +V YC + T CRR +
Sbjct: 306 RDGNDSVCILYYHYGDTALFKKFIDESDASPEQKERQRMDLQRVVQYCQNITDCRRTQVL 365
Query: 204 SYFDEAWSDTECRGMCDHC 222
YFDE ++ C CD+C
Sbjct: 366 QYFDEEFAPENCHKSCDNC 384
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + ++V +IAFG+GIDKP+VR+VIHH L KS+E +YQ
Sbjct: 259 WKHNEFKVIVATIAFGMGIDKPDVRYVIHHSLPKSLEGYYQ 299
>gi|392344358|ref|XP_003748936.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S KEC+ + + L+ GL AYHA L + +IAF
Sbjct: 881 SGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 940
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFV+H L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 941 GMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1000
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1001 DGNYHTRETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKHPDVSCDNC 1057
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H L KS+E +YQ
Sbjct: 936 ATIAFGMGIDKPDVRFVVHASLPKSVEGYYQ 966
>gi|392337763|ref|XP_003753349.1| PREDICTED: Bloom syndrome protein homolog [Rattus norvegicus]
Length = 1401
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 102/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S KEC+ + + L+ GL AYHA L + +IAF
Sbjct: 881 SGIIYCLSRKECDTMADTLQREGLAALAYHAGLSDSARDEVQHKWINQDNCQVICATIAF 940
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFV+H L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 941 GMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMMEK 1000
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G + NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1001 DGNYHTRETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKHPDVSCDNC 1057
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H L KS+E +YQ
Sbjct: 936 ATIAFGMGIDKPDVRFVVHASLPKSVEGYYQ 966
>gi|66475914|ref|XP_627773.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
gi|32399019|emb|CAD98259.1| DEAD/DEAH box helicase [Cryptosporidium parvum]
gi|46229189|gb|EAK90038.1| RecQ bloom helicase (RNA helicase+hrdc) [Cryptosporidium parvum
Iowa II]
Length = 990
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 78/235 (33%), Positives = 122/235 (51%), Gaps = 52/235 (22%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLM-SRRFRNQSGIIYT 83
F L D+PN++ Y+VR K ++K L+E+ +L+ S RF + IIY
Sbjct: 429 FSLSFDRPNLK--------------YEVRAKSGSKKKMLNEICELLRSPRFCRSTSIIYC 474
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKP 125
S ECE++ ++L G+ + YH ++ + +IAFG+GI+K
Sbjct: 475 LSRNECEEVSKDLNKEGISATYYHGSMKEDKRNLAQRRWMNDEKQVMVATIAFGMGINKK 534
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV----------- 174
+VR VIH + KS+EN+YQESGRAGRDG + CILYY DV +L ++
Sbjct: 535 DVRLVIHLSMPKSLENYYQESGRAGRDGLESKCILYYSYKDVSRLQTLAGVNIEKPSKKY 594
Query: 175 -------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ ++ + L +V YC +Q +CRR +I S+F E + +C+ CD+C
Sbjct: 595 YTSKNNSSNNKSTIDGLLGMVKYCEEQYKCRRTMILSHFGEDFKG-KCKVKCDNC 648
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 28/41 (68%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+K +VR VIH + KS+EN+YQ
Sbjct: 513 WMNDEKQVMVATIAFGMGINKKDVRLVIHLSMPKSLENYYQ 553
>gi|308801525|ref|XP_003078076.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
gi|116056527|emb|CAL52816.1| DNA helicase isolog (ISS) [Ostreococcus tauri]
Length = 1174
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/209 (38%), Positives = 110/209 (52%), Gaps = 46/209 (22%)
Query: 60 KDCLDELADLMSRR--FRN---QSGIIYTTSIKECEDLREEL----RNRG--------LR 102
K + E+ D++ +R RN Q GIIY S +CE + EL R+ G L+
Sbjct: 555 KQMISEIKDVIVKRGLMRNKRVQCGIIYCFSQADCEKIASELNKVDRSAGDHTRFPKRLK 614
Query: 103 VSAYHAKL---------------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
YHA L E N+ ++AFG+GI+KPNVRFV HH + KS+E ++Q
Sbjct: 615 AVPYHAGLPEATRKKHQEMWQRDEVNIICATVAFGMGINKPNVRFVFHHSMPKSLEAYHQ 674
Query: 145 ESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLD 193
ESGRAGRDG+ CIL+Y D K SM+ D Q L +L +VSYC +
Sbjct: 675 ESGRAGRDGEHGLCILFYSWGDASKARSMLMDSARKERAQPAVLQNNLDSLNTMVSYCEN 734
Query: 194 QTRCRRAIIASYFDEAWSDTECRGMCDHC 222
CRR + ++FDE + + CRGMCD C
Sbjct: 735 MADCRRTQLMAHFDERFERSRCRGMCDSC 763
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV HH + KS+E ++Q
Sbjct: 644 ATVAFGMGINKPNVRFVFHHSMPKSLEAYHQ 674
>gi|429961617|gb|ELA41162.1| RecQ family ATP-dependent DNA helicase [Vittaforma corneae ATCC
50505]
Length = 733
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 72/192 (37%), Positives = 105/192 (54%), Gaps = 27/192 (14%)
Query: 57 AAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL---ESN 113
+ K L ++ + + N GIIY TS K+CE++ E+L N L+ + YHA L E N
Sbjct: 371 SKTKKSLTDIVSFVHTYYPNSPGIIYCTSKKDCEEMSEKL-NEHLKTTFYHAGLSKRERN 429
Query: 114 ---------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC 158
+IAFG+GIDK +VRFVIH+ L KS+E +YQE+GRAGRDG + C
Sbjct: 430 KVQEMWNDGTIKIIVATIAFGMGIDKSDVRFVIHYSLPKSLEGYYQETGRAGRDGLESVC 489
Query: 159 ILYYRLPDVFKLSSMVFDQQTGLANLYN--------IVSYCLDQTRCRRAIIASYFDEAW 210
ILYY D + ++ + ++ N +V YC ++T CRR ++ S+F E +
Sbjct: 490 ILYYNYGDTKTIEFLIANNHNATSDQKNRQREELKYVVQYCENKTDCRRKLVLSHFGENF 549
Query: 211 SDTECRGMCDHC 222
EC CD+C
Sbjct: 550 DPAECNKTCDNC 561
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK +VRFVIH+ L KS+E +YQ
Sbjct: 445 ATIAFGMGIDKSDVRFVIHYSLPKSLEGYYQ 475
>gi|242214076|ref|XP_002472863.1| predicted protein [Postia placenta Mad-698-R]
gi|220728069|gb|EED81971.1| predicted protein [Postia placenta Mad-698-R]
Length = 452
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 109/200 (54%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR+K +K DE+ D + + +N+SG+IY +S +CE++ + LR++ GL+ YHA
Sbjct: 210 YEVRLK---KKKVTDEIVDFIVTKHKNESGVIYCSSKVKCEEVAKNLRDKYGLKARHYHA 266
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +IA G+GIDK NVRFVIH+ + S+E +YQE+GRAG
Sbjct: 267 GLDDRDRTVTMQEWKRGDFKIVVATIALGMGIDKGNVRFVIHYAMPSSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKL-------SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ A CILYY D + S +++ ++ +C++ CRR +
Sbjct: 327 RDGKPADCILYYSGSDAHPVWRRINEESIPETEKEKQRDTFRRVIQFCVNNVDCRRRQVL 386
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 387 GFFGEVFDSASCRKGCDNCR 406
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +++ +IA G+GIDK NVRFVIH+ + S+E +YQ
Sbjct: 280 WKRGDFKIVVATIALGMGIDKGNVRFVIHYAMPSSLEGYYQ 320
>gi|301768849|ref|XP_002919837.1| PREDICTED: Bloom syndrome protein-like [Ailuropoda melanoleuca]
gi|281350343|gb|EFB25927.1| hypothetical protein PANDA_008500 [Ailuropoda melanoleuca]
Length = 1423
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 884 DCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQH 939
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+
Sbjct: 940 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLF 999
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G + NLY++V YC + T CRR + +YF E +
Sbjct: 1000 YTYHDVTRLKRLILMEKEGNHHTRETHINNLYSMVHYCENITECRRIQLLAYFGEKGFNP 1059
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1060 DFCKKYPDVSCDNC 1073
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 952 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 982
>gi|448097267|ref|XP_004198627.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
gi|359380049|emb|CCE82290.1| Piso0_002008 [Millerozyma farinosa CBS 7064]
Length = 1415
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 127/249 (51%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHC-------LSKSMEN---FYQVRIKPAAQ 59
++L++ F QV + VR ++HH L +S FY+++ K A
Sbjct: 889 MSLFKQQFPQVPVIALTATANEKVRMDIVHHLQMSDPVLLKQSFNRTNLFYEIKWKAA-- 946
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ LD + D + + +N++GIIY S + CE + L G+R S YHA L
Sbjct: 947 -NFLDWIRDYILTKQQNKTGIIYCHSKQSCEVTADRLNQWGVRCSYYHAGLSPTERFQIQ 1005
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAGRDG + CI++
Sbjct: 1006 TDWQQNRIQVICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGLPSECIMF 1065
Query: 162 YRLPDVFKLSSMV-----FD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L +M+ D +++ LA L +V YC + + CRR + YF+E +
Sbjct: 1066 YSYKDARSLQNMIQRDSELDREGKESHLAKLRQVVQYCENTSDCRRKQVLHYFNERFDPA 1125
Query: 214 ECRGMCDHC 222
C CD+C
Sbjct: 1126 HCARKCDNC 1134
>gi|301106430|ref|XP_002902298.1| bloom syndrome protein [Phytophthora infestans T30-4]
gi|262098918|gb|EEY56970.1| bloom syndrome protein [Phytophthora infestans T30-4]
Length = 1022
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 113/207 (54%), Gaps = 37/207 (17%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL--------RNRGL 101
Y VR K + + E+AD + R+ + SGIIY S K+CE E+L +
Sbjct: 418 YDVRKKTSK---FMSEIADFV-RKHIDDSGIIYCLSKKDCEQTAEKLIKALGFEHTRKAS 473
Query: 102 RVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFY 143
++S YHA LE+ ++AFG+GI+KP+VR+VIHH + +S+ ++Y
Sbjct: 474 QISFYHAGLEAGDRAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYY 533
Query: 144 QESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTR 196
QE+GRAGRDG++A+CILYY D+ + ++ + L NL + +C +Q
Sbjct: 534 QEAGRAGRDGEVANCILYYSFLDLTRRRKLITKDRDNMQHRNVHLQNLRRMTEFCENQVE 593
Query: 197 CRRAIIASYFDEAWSDTECRGMCDHCR 223
CRR + YF E +S +C G CD+C+
Sbjct: 594 CRRTSLLEYFGEHFSSEQCHGTCDNCK 620
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VR+VIHH + +S+ ++YQ
Sbjct: 504 ATVAFGMGINKPDVRYVIHHTIPQSVTHYYQ 534
>gi|145344767|ref|XP_001416896.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577122|gb|ABO95189.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 470
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 79/209 (37%), Positives = 105/209 (50%), Gaps = 46/209 (22%)
Query: 60 KDCLDELADL-----MSRRFRNQSGIIYTTSIKECEDLREELRN------------RGLR 102
K ++E+ +L + R R Q GIIY S +CE + EL + LR
Sbjct: 236 KQMVNEIKNLIVSRKLMRNNRVQCGIIYCFSQADCEKIATELNKIDRSVGDRERFPKRLR 295
Query: 103 VSAYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
YHA L NV ++AFG+GI+KPNVRFV HH + KS+E ++Q
Sbjct: 296 AVPYHAGLADNVRKKHQEMWQRDEVNIICATVAFGMGINKPNVRFVFHHSMPKSLEAYHQ 355
Query: 145 ESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYNIVSYCLD 193
ESGRAGRDG CIL+Y D K SM+ D Q L +L +VSYC +
Sbjct: 356 ESGRAGRDGDHGLCILFYSWGDASKARSMLIDSARRERAQPAVLQNNLESLNTMVSYCEN 415
Query: 194 QTRCRRAIIASYFDEAWSDTECRGMCDHC 222
CRR + ++FDE + + CRGMCD C
Sbjct: 416 LADCRRTQLMAHFDERFERSHCRGMCDSC 444
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV HH + KS+E ++Q
Sbjct: 325 ATVAFGMGINKPNVRFVFHHSMPKSLEAYHQ 355
>gi|406699602|gb|EKD02803.1| hypothetical protein A1Q2_02878 [Trichosporon asahii var. asahii
CBS 8904]
Length = 929
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K QK+ L+++ + + + + SGI+Y +S ++CE + +ELR++ +R YHA
Sbjct: 382 YEVRPK---QKNVLEKIVNFIKTQTQGVSGIVYCSSREKCEIIAKELRDKDIRAWHYHAG 438
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ +IAFG+GIDKP+VR+VIHH L +S+E +YQE+GRAGR
Sbjct: 439 MTKGDRRKIQEGWQEHKFEVIVATIAFGMGIDKPDVRYVIHHSLPRSLEGYYQETGRAGR 498
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAIIA 203
DG+ + CILYY D + +++ + Q L ++ +C ++T CRR I
Sbjct: 499 DGKNSTCILYYTYADSKTVLNLINNDQNLSRPQKERQTDALKEVLRFCHNKTDCRRTQIL 558
Query: 204 SYFDEAWSDTECRGMCDHC 222
++F+E+++ C CD C
Sbjct: 559 AFFNESFNAANCNQGCDVC 577
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ ++V +IAFG+GIDKP+VR+VIHH L +S+E +YQ
Sbjct: 451 WQEHKFEVIVATIAFGMGIDKPDVRYVIHHSLPRSLEGYYQ 491
>gi|254583105|ref|XP_002499284.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
gi|238942858|emb|CAR31029.1| ZYRO0E08250p [Zygosaccharomyces rouxii]
Length = 1294
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 65/189 (34%), Positives = 107/189 (56%), Gaps = 26/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K+ + E+ + ++ RF NQ+GIIY S CE +++ G+R + YHA +E +
Sbjct: 767 KNTIAEICESINTRFANQTGIIYCHSKNSCEQTAAQIQRNGIRCAFYHAGMEPDERSDVQ 826
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GIDK +VRFV H+ + +++E +YQE+GRAGRDG+ + CI Y
Sbjct: 827 RAWQNDDLQVICATVAFGMGIDKADVRFVYHYTVPRTLEGYYQETGRAGRDGKPSFCITY 886
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV + +M+ +++ L L N++ YC + CRR ++ SYF+E +
Sbjct: 887 YTFRDVRSIQTMIQKDKNLDKDNKEKHLNKLQNVMMYCENGLDCRRKLVLSYFNEEFDAK 946
Query: 214 ECRGMCDHC 222
+C CD+C
Sbjct: 947 DCHKNCDNC 955
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV ++AFG+GIDK +VRFV H+ + +++E +YQ
Sbjct: 829 WQNDDLQVICATVAFGMGIDKADVRFVYHYTVPRTLEGYYQ 869
>gi|401887675|gb|EJT51654.1| hypothetical protein A1Q1_07066 [Trichosporon asahii var. asahii
CBS 2479]
Length = 929
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 114/199 (57%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K QK+ L+++ + + + + SGI+Y +S ++CE + +ELR++ +R YHA
Sbjct: 382 YEVRPK---QKNVLEKIVNFIKTQTQGVSGIVYCSSREKCEIIAKELRDKDIRAWHYHAG 438
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ +IAFG+GIDKP+VR+VIHH L +S+E +YQE+GRAGR
Sbjct: 439 MTKGDRRKIQEGWQEHKFEVIVATIAFGMGIDKPDVRYVIHHSLPRSLEGYYQETGRAGR 498
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAIIA 203
DG+ + CILYY D + +++ + Q L ++ +C ++T CRR I
Sbjct: 499 DGKNSTCILYYTYADSKTVLNLINNDQNLSRPQKERQTDALKEVLRFCHNKTDCRRTQIL 558
Query: 204 SYFDEAWSDTECRGMCDHC 222
++F+E+++ C CD C
Sbjct: 559 AFFNESFNAANCNQGCDVC 577
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ ++V +IAFG+GIDKP+VR+VIHH L +S+E +YQ
Sbjct: 451 WQEHKFEVIVATIAFGMGIDKPDVRYVIHHSLPRSLEGYYQ 491
>gi|397472473|ref|XP_003807768.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan paniscus]
gi|397472475|ref|XP_003807769.1| PREDICTED: Bloom syndrome protein isoform 2 [Pan paniscus]
Length = 1417
Score = 131 bits (329), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 975
>gi|410261436|gb|JAA18684.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 975
>gi|410346341|gb|JAA40688.1| Bloom syndrome, RecQ helicase-like [Pan troglodytes]
Length = 1417
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 975
>gi|291410501|ref|XP_002721547.1| PREDICTED: Bloom syndrome protein [Oryctolagus cuniculus]
Length = 1414
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 53/258 (20%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNV--------RFVIHHCLSKSME----NFYQVRIKPAA 58
+N+ R F V + P V + V S S +Y + KP
Sbjct: 816 MNMLRQKFPSVPVMALTATANPRVQKDILTQLKIVRPQVFSMSFNRHNLKYYVLPKKPKK 875
Query: 59 QK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--- 114
DCL+ + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 876 VAFDCLE----WIRKHHPYDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDE 931
Query: 115 ----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC 158
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC
Sbjct: 932 VQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHC 991
Query: 159 ILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-- 208
+L+Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E
Sbjct: 992 VLFYTYHDVTRLKRLILMEKDGNQHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENG 1051
Query: 209 -------AWSDTECRGMC 219
+SD C C
Sbjct: 1052 FNPNFCKKYSDVSCDNCC 1069
>gi|114658901|ref|XP_510594.2| PREDICTED: Bloom syndrome protein isoform 2 [Pan troglodytes]
gi|332844655|ref|XP_003314898.1| PREDICTED: Bloom syndrome protein isoform 1 [Pan troglodytes]
Length = 1417
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 975
>gi|5281068|gb|AAD41441.1|U92536_1 RECQ helicase homolog [Drosophila melanogaster]
Length = 1487
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 33/213 (15%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD+++ + + ++ SGIIY S KEC++ +++ G+R +YHA L
Sbjct: 935 RVLPKKGVSTLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGVRAVSYHAGLTD 994
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
++AFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG
Sbjct: 995 TDRESRQKDWLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGD 1054
Query: 155 IAHCILYYRLPDVFKLSSMVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASY 205
+A CILYY D+ ++ M+ D L NLY IV YC + T CRRA Y
Sbjct: 1055 VADCILYYNYSDMLRIKKML-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDY 1113
Query: 206 FDEAWSDTEC----RGMCDHCRGGRRDAKRVDV 234
F ++ +C CD+C +R K VD
Sbjct: 1114 FGGHFTSEQCLENRETACDNCI-NKRAYKAVDA 1145
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V ++AFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 1004 WLTGKMRVICATVAFGMGIDKPDVRFVLHYSLPKSIEGYYQ 1044
>gi|308452165|ref|XP_003088938.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
gi|308244257|gb|EFO88209.1| hypothetical protein CRE_17749 [Caenorhabditis remanei]
Length = 1020
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/205 (34%), Positives = 110/205 (53%), Gaps = 29/205 (14%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV- 114
P A K ++ + + M + + +SGI+Y S KECE ++ L GL YHA L +
Sbjct: 484 PKAAKSLIN-VVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDGLR 542
Query: 115 -----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG ++
Sbjct: 543 VSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSY 602
Query: 158 CILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
C++ Y D +L M+ + T L N+ +V+YC + + CRR ++ +F E +
Sbjct: 603 CLMLYSYHDSIRLRRMIEEGNTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVY 662
Query: 211 SDTECRG---MCDHCRGGRRDAKRV 232
+ CR CD C R++ + +
Sbjct: 663 DEQSCRNSKTPCDVCERQRKNPEAI 687
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 559 ATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 589
>gi|385301828|gb|EIF45990.1| atp-dependent helicase [Dekkera bruxellensis AWRI1499]
Length = 358
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 64/190 (33%), Positives = 107/190 (56%), Gaps = 26/190 (13%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----- 113
+K+ + +A+L+++++ N +GIIY S CE E+L G++ YHA + +
Sbjct: 149 KKNTVQRIAELINKKYTNYTGIIYCHSKNSCEHTSEKLCAFGIKCDFYHAGMSTEDRSRV 208
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIH + +++E +YQE+GRAGRDG+ + C++
Sbjct: 209 QMAWQHDQIKVICATIAFGMGIDKPDVRFVIHLTMPRNLEGYYQETGRAGRDGKHSDCLM 268
Query: 161 YYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
YY + D L +++ ++ LA L ++ YC + T CRR + YF+E++
Sbjct: 269 YYSMRDAMTLQNLIQRDRELDRDSKEQHLAKLRQVIQYCENTTDCRRQQVLQYFNESFDR 328
Query: 213 TECRGMCDHC 222
C CD+C
Sbjct: 329 KNCHKQCDNC 338
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + +++E +YQ
Sbjct: 222 ATIAFGMGIDKPDVRFVIHLTMPRNLEGYYQ 252
>gi|149276388|ref|ZP_01882532.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
gi|149232908|gb|EDM38283.1| putative ATP-dependent DNA helicase [Pedobacter sp. BAL39]
Length = 729
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K +D + E+ + +SGIIY S K+ E++ E L G++ YHA
Sbjct: 212 FYEIRPK----RDVIKEIIRYIKYN-TGKSGIIYCLSRKKVEEVAESLNLNGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE V +IAFG+GIDKP+VRFVIHH + KSME +YQE+GRAG
Sbjct: 267 GLEPKVRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGVCIAFYAQKDVDKLAKFMKDKPVSEREIGTQILKEVIDYA-ESGVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++T C MCD+C+ ++
Sbjct: 386 FGENFNETGCNCMCDNCKKPKQ 407
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 14/85 (16%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ------------VRIKPAAQKDCLDELADL 69
+IAFG+GIDKP+VRFVIHH + KSME +YQ V I AQKD +D+LA
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSMEGYYQETGRAGRDGGEGVCIAFYAQKD-VDKLAKF 349
Query: 70 MSRRFRNQSGIIYTTSIKECEDLRE 94
M + ++ I T +KE D E
Sbjct: 350 MKDKPVSERE-IGTQILKEVIDYAE 373
>gi|354683879|gb|AER35068.1| ATP-dependent DNA helicase [Dictyostelium lacteum]
Length = 748
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 52/224 (23%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
YQVR+K + L ++ +S+++ +SGIIY + K+CE + E L +RGL YHA
Sbjct: 483 IYQVRLKSQDSQSVLTDIYAYISKKYPKESGIIYCATTKDCEIISEYLSSRGLDTCFYHA 542
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ + +IAFG+GIDK N RFVIHH + +S+E +YQ++GRAG
Sbjct: 543 SLKPSQRIQLQNDWTEGRFKVVCTTIAFGMGIDKSNTRFVIHHTIPQSIEAYYQQTGRAG 602
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--DQQTGLAN------------------------- 183
RDGQ + CILYY D+ L ++ D++T L+
Sbjct: 603 RDGQTSDCILYYSKFDLILLKKLMANSDKRTKLSKEPFQDEVYPDETDEDPEEILKQLQA 662
Query: 184 -----LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L N+VS+C++ CRR + YF E C+ CD+C
Sbjct: 663 NKNDMLDNMVSFCVNTKECRRVSLLKYFSEQ--SKPCKTNCDNC 704
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 31/47 (65%), Gaps = 3/47 (6%)
Query: 8 IAYLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
I N W ++V +IAFG+GIDK N RFVIHH + +S+E +YQ
Sbjct: 550 IQLQNDWTEGRFKVVCTTIAFGMGIDKSNTRFVIHHTIPQSIEAYYQ 596
>gi|336375158|gb|EGO03494.1| hypothetical protein SERLA73DRAFT_83518 [Serpula lacrymans var.
lacrymans S7.3]
Length = 712
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 33/206 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG---LRVSAY 106
Y V KP++ ++ + + + + R++SGI+Y ++ K+ E + E L ++ Y
Sbjct: 230 YAVLPKPSSTTQVIEAMVEYILEKHRDESGIVYCSTKKDTESVAENLHQISGGVIKAGVY 289
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H+++ +IAFGLGIDK NVRFV+HH +SKS++ FYQESGR
Sbjct: 290 HSEVPDGKKEQLHRQWRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQESGR 349
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD- 207
AGRDG+ + CILYYR D K SS+ A LY+++ + D CR+ + A YF
Sbjct: 350 AGRDGKASDCILYYRPQDATKQSSITSKDAESQAKLYDVLRFVQDLQECRKILFARYFSA 409
Query: 208 ------EAWSDTECR-----GMCDHC 222
+W+ E G CD+C
Sbjct: 410 SADLSMASWTTEESDAFERCGHCDNC 435
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV +IAFGLGIDK NVRFV+HH +SKS++ FYQ
Sbjct: 305 WRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQ 345
>gi|401412075|ref|XP_003885485.1| hypothetical protein NCLIV_058800 [Neospora caninum Liverpool]
gi|325119904|emb|CBZ55457.1| hypothetical protein NCLIV_058800 [Neospora caninum Liverpool]
Length = 962
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/220 (38%), Positives = 117/220 (53%), Gaps = 38/220 (17%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
FY V KP ++ + +AD + R F QSGI+Y S KE E L L++ + + YH
Sbjct: 390 FYHVVHKPKTSEEQIRLIADFI-RAFNGQSGILYCLSRKEAEILCVALKHDFQISCAFYH 448
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
L++N ++AFG+GI+K +VRFV+HH L KS++N+YQE+GRA
Sbjct: 449 GDLDANSRLEIHRQWSAGYVSVVVATVAFGMGINKADVRFVVHHSLPKSVDNYYQETGRA 508
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLD----------QTRCRR 199
GRDG AHC+L YR DV + S MV+ + +GL LY +V +C RCRR
Sbjct: 509 GRDGSPAHCLLLYRPSDVSRQSVMVYWEPSGLRLLYEMVRFCSGLEPLSSDAWRGGRCRR 568
Query: 200 AIIASYFDEAWSDTECRGMCDHC------RGGRRDAKRVD 233
I ++F +A C MCD C G R +A VD
Sbjct: 569 EAICAHFGDAA--VSCERMCDRCAVTQLSPGERSNAVAVD 606
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + V ++AFG+GI+K +VRFV+HH L KS++N+YQ
Sbjct: 463 WSAGYVSVVVATVAFGMGINKADVRFVVHHSLPKSVDNYYQ 503
>gi|345798304|ref|XP_003434427.1| PREDICTED: Bloom syndrome protein [Canis lupus familiaris]
Length = 1420
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 109/194 (56%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 879 DCLE----WIRKYHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQH 934
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+
Sbjct: 935 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLF 994
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E+ +
Sbjct: 995 YTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGESGFNP 1054
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1055 DFCKKYPDVSCDNC 1068
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 947 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 977
>gi|348680141|gb|EGZ19957.1| hypothetical protein PHYSODRAFT_312852 [Phytophthora sojae]
Length = 1112
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 108/194 (55%), Gaps = 34/194 (17%)
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREEL--------RNRGLRVSAYHAKLESN- 113
+ E+AD + R+ + SGIIY S K+CE ++L + ++S YHA LE
Sbjct: 516 MTEIADYV-RKHIDDSGIIYCLSKKDCEQTADKLIKALGFEHTRKASQISFYHAGLEPED 574
Query: 114 -----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIA 156
++AFG+GI+KP+VR+VIHH + +S+ ++YQE+GRAGRDG++A
Sbjct: 575 RAYRHHEWSKGKIKLICATVAFGMGINKPDVRYVIHHTIPQSVTHYYQEAGRAGRDGEVA 634
Query: 157 HCILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEA 209
+CILYY D+ + ++ + L NL + +C +Q CRR + YF E
Sbjct: 635 NCILYYSFLDLTRRRKLITKDRDNMQHRNVHLQNLRRMTEFCENQVECRRTSLLEYFGEH 694
Query: 210 WSDTECRGMCDHCR 223
+S +CRG CD+C+
Sbjct: 695 FSSDQCRGTCDNCK 708
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VR+VIHH + +S+ ++YQ
Sbjct: 592 ATVAFGMGINKPDVRYVIHHTIPQSVTHYYQ 622
>gi|336388103|gb|EGO29247.1| hypothetical protein SERLADRAFT_445074 [Serpula lacrymans var.
lacrymans S7.9]
Length = 562
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/206 (34%), Positives = 108/206 (52%), Gaps = 33/206 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG---LRVSAY 106
Y V KP++ ++ + + + + R++SGI+Y ++ K+ E + E L ++ Y
Sbjct: 228 YAVLPKPSSTTQVIEAMVEYILEKHRDESGIVYCSTKKDTESVAENLHQISGGVIKAGVY 287
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H+++ +IAFGLGIDK NVRFV+HH +SKS++ FYQESGR
Sbjct: 288 HSEVPDGKKEQLHRQWRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQESGR 347
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD- 207
AGRDG+ + CILYYR D K SS+ A LY+++ + D CR+ + A YF
Sbjct: 348 AGRDGKASDCILYYRPQDATKQSSITSKDAESQAKLYDVLRFVQDLQECRKILFARYFSA 407
Query: 208 ------EAWSDTECR-----GMCDHC 222
+W+ E G CD+C
Sbjct: 408 SADLSMASWTTEESDAFERCGHCDNC 433
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV +IAFGLGIDK NVRFV+HH +SKS++ FYQ
Sbjct: 303 WRQGDVQVVCATIAFGLGIDKGNVRFVLHHTMSKSLDGFYQ 343
>gi|268535576|ref|XP_002632923.1| C. briggsae CBR-HIM-6 protein [Caenorhabditis briggsae]
Length = 395
Score = 130 bits (328), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 105/194 (54%), Gaps = 28/194 (14%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV- 114
P A K ++ + + M + + +SGI+Y S KECE ++ L GL YHA L N+
Sbjct: 202 PKAAKSLIN-VVEKMKQLYPGKSGIVYCLSRKECETVQMMLTKAGLSAEVYHAGLNDNLR 260
Query: 115 -----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRDG ++
Sbjct: 261 VSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRDGMPSY 320
Query: 158 CILYYRLPDVFKLSSMVFDQQTG------LANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
C++ Y D +L M+ T L N+ +V+YC + + CRR ++ +F E +
Sbjct: 321 CLMLYSYHDSIRLRRMIEGNTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEHFGEVYD 380
Query: 212 DTECRG---MCDHC 222
+ CR CD C
Sbjct: 381 EQSCRNSKTPCDVC 394
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 278 TIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 307
>gi|392585074|gb|EIW74415.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 885
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/215 (36%), Positives = 113/215 (52%), Gaps = 32/215 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLRVSAY 106
Y V KPAA KD L +AD + +++SGIIY K+ E++ + EL ++ Y
Sbjct: 357 YTVLPKPAASKDVLTVMADYIRFNHKDESGIIYCLKRKDAENVAQVLHELSKGQIKTGVY 416
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA++ +IAFGLGIDK NVRFVIHH +K+++ +YQESGR
Sbjct: 417 HAEVGDAEKEHLHKQWRSGAVQVVCATIAFGLGIDKGNVRFVIHH--TKTLDGYYQESGR 474
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD- 207
AGRDG A C+LYYR D +S+ F + G + L +++++ D CR+ + A YF
Sbjct: 475 AGRDGADADCVLYYRPQDAAHQASVSFSDKDGPSKLRDMLAFAQDLQECRKILFAKYFSA 534
Query: 208 ------EAWSDTECRGM--CDHCRGGRRDAKRVDV 234
AW+ E + C HC R + +DV
Sbjct: 535 SSELQMSAWTTAEKGSLDRCGHCDNCTRSPETLDV 569
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR+ QV +IAFGLGIDK NVRFVIHH +K+++ +YQ
Sbjct: 432 WRSGAVQVVCATIAFGLGIDKGNVRFVIHH--TKTLDGYYQ 470
>gi|410960520|ref|XP_003986837.1| PREDICTED: Bloom syndrome protein [Felis catus]
Length = 1428
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 108/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 888 DCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQH 943
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+
Sbjct: 944 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLF 1003
Query: 162 YRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y DV +L ++ ++ G NLY++V YC + T CRR + +YF E +
Sbjct: 1004 YTYHDVTRLKRLILMEKDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNP 1063
Query: 214 E-CRG----MCDHC 222
+ C+ CD+C
Sbjct: 1064 DFCKKYPDVSCDNC 1077
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 956 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 986
>gi|344284334|ref|XP_003413923.1| PREDICTED: Bloom syndrome protein [Loxodonta africana]
Length = 1429
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 100/177 (56%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + E L+ GL AYHA L ++AF
Sbjct: 902 SGIIYCLSRRECDTMAETLKKNGLAALAYHAGLSDCARDEVQHKWINQDGCQVICATVAF 961
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 962 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILTEK 1021
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
G NLY++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 1022 DGNQHTKETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPYFCKKYPEVSCDNC 1078
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 957 ATVAFGMGIDKPDVRFVIHASLPKSVEGYYQ 987
>gi|223997914|ref|XP_002288630.1| probable DNA helicase [Thalassiosira pseudonana CCMP1335]
gi|220975738|gb|EED94066.1| probable DNA helicase [Thalassiosira pseudonana CCMP1335]
Length = 518
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 81/217 (37%), Positives = 118/217 (54%), Gaps = 39/217 (17%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRN-------RGLR 102
Y+VR K +D +AD ++ R RN SG+IY S K+CE L ++L N R +R
Sbjct: 188 YEVRRK---DNKTVDTIADYIAER-RNDSGVIYCLSRKDCETLSDKLNNKLREKGFRDVR 243
Query: 103 VSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
VS YHA+L+ +IAFG+GIDKP+VR+V+H+ + KS+ ++YQ
Sbjct: 244 VSYYHAELDQRERHQRHHAWSLGHISVLCATIAFGMGIDKPDVRYVMHYSMPKSITHYYQ 303
Query: 145 ESGRAGRDGQIAHCILYYRLPDVFKLSSMV-----FDQQT-----GLANLYNIVSYCLDQ 194
ESGRAGRDG A CIL+Y D L M+ +Q++ + +LY + YC +
Sbjct: 304 ESGRAGRDGGNADCILFYAYKDKKTLEMMIRKAAGHNQRSQATLRKIDHLYTCLRYCENT 363
Query: 195 TRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKR 231
CRR + +F E + +C CD+CR G + KR
Sbjct: 364 FECRRTLQLQFFGEMFEKHKCNKTCDNCRLGLVEEKR 400
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V+H+ + KS+ ++YQ
Sbjct: 273 ATIAFGMGIDKPDVRYVMHYSMPKSITHYYQ 303
>gi|392575674|gb|EIW68807.1| hypothetical protein TREMEDRAFT_12143, partial [Tremella
mesenterica DSM 1558]
Length = 663
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 105/178 (58%), Gaps = 21/178 (11%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR--NRG-LRVSAY 106
Y+V KP++ K ++ + + + R+ SGIIY S K+ E + +ELR +RG ++ Y
Sbjct: 308 YKVLPKPSSAKAAIERIGNWIQRKHPGDSGIIYCLSKKDTETVADELREWSRGQIKTGVY 367
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA ++ +IAFGLGIDK +VR+VIHH +SKS++ +YQE+GR
Sbjct: 368 HAGVDDAAKEGIHLDWRKGRINCICATIAFGLGIDKGDVRYVIHHSMSKSLDGYYQETGR 427
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
AGRDG+ + C+L+YR D +LSS+++ G A L+ ++ + D CR+ A YF
Sbjct: 428 AGRDGKDSDCVLFYRGQDASRLSSLIYGDVDGTAKLHEMLRFAQDLKTCRKVAFAKYF 485
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFGLGIDK +VR+VIHH +SKS++ +YQ
Sbjct: 393 ATIAFGLGIDKGDVRYVIHHSMSKSLDGYYQ 423
>gi|432093931|gb|ELK25783.1| Bloom syndrome protein [Myotis davidii]
Length = 1296
Score = 130 bits (327), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 113/207 (54%), Gaps = 37/207 (17%)
Query: 49 FYQVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y + KP DCL+ + + + SGIIY S +EC+ + + L+ GL AYH
Sbjct: 745 YYVLPKKPKKVAFDCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKNGLPALAYH 800
Query: 108 AKLESNV-------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
A L + +IAFG+GIDKP+VRFVIH L KS+E +YQESGR
Sbjct: 801 AGLSDSARDEVQHKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGR 860
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC+L+Y DV +L ++ ++ G NLY++V YC + T CRR
Sbjct: 861 AGRDGEISHCLLFYTYYDVTRLKRLILMEKDGNHHTRETHFNNLYSMVHYCENITECRRI 920
Query: 201 IIASYFDE-AWSDTECRG----MCDHC 222
+ +YF E ++ C+ CD+C
Sbjct: 921 QLLAYFGEIGFNPDFCKKHPEVSCDNC 947
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 826 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 856
>gi|410931710|ref|XP_003979238.1| PREDICTED: ATP-dependent DNA helicase Q1-like [Takifugu rubripes]
Length = 415
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 55/104 (52%), Positives = 75/104 (72%)
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQT 179
+GIDKP+VRFVIHH +SKS+EN+YQESGRAGRD A C++Y+ D+F++S+MV +
Sbjct: 1 MGIDKPDVRFVIHHTISKSIENYYQESGRAGRDDCPADCVIYFGFSDIFRISTMVVMENV 60
Query: 180 GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
G L ++ YC RCRR+++A +FDE W D C+ MCD CR
Sbjct: 61 GQQKLRQMLDYCQSIDRCRRSLMAVHFDEVWDDEGCQQMCDTCR 104
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%), Gaps = 1/36 (2%)
Query: 27 LGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDC 62
+GIDKP+VRFVIHH +SKS+EN+YQ + A + DC
Sbjct: 1 MGIDKPDVRFVIHHTISKSIENYYQESGR-AGRDDC 35
>gi|294658176|ref|XP_460513.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
gi|202952930|emb|CAG88826.2| DEHA2F03388p [Debaryomyces hansenii CBS767]
Length = 1367
Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/249 (31%), Positives = 126/249 (50%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHC-------LSKSMEN---FYQVRIKPAAQ 59
+N ++ ++ +V + VR +IHH L +S FY+++ K +
Sbjct: 776 MNYFKHNYPKVPVMALTATANEKVRMDIIHHLKMDNPILLKQSFNRLNLFYEIKWKTS-- 833
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ L+ + + + + N++GIIY S + CE E+L G+ S YHA L
Sbjct: 834 -NTLEWIKNYILTKQVNKTGIIYCHSKQSCEHTSEKLNEWGVNASYYHAGLSPTDRFEIQ 892
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VR+VIH + +++E +YQE+GRAGRDG + CI++
Sbjct: 893 NKWQQNELQIICATIAFGMGIDKPDVRYVIHLFIPRTLEGYYQETGRAGRDGAYSECIMF 952
Query: 162 YRLPDVFKLSSMV-----FD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L +M+ D ++ LA L +V YC + T CRR + YF+E ++
Sbjct: 953 YSYKDARSLQNMIQRDEELDREGKENHLAKLRQVVQYCENTTDCRRKQVLHYFNEQFNPI 1012
Query: 214 ECRGMCDHC 222
C CD+C
Sbjct: 1013 TCNKKCDNC 1021
>gi|431795569|ref|YP_007222473.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
gi|430786334|gb|AGA76463.1| ATP-dependent DNA helicase RecQ [Echinicola vietnamensis DSM 17526]
Length = 725
Score = 130 bits (327), Expect = 5e-28, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 118/204 (57%), Gaps = 30/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR P A+ D L + + + +SGIIY S K+ E++ E L+ G+ + YHA
Sbjct: 207 FYEVR--PKAKSDTKKHLIKYVKSQ-KGKSGIIYCLSRKKVEEIAELLKVNGINAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LES + +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLESAMRIKNQDDFLNEEVDVVVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++Y+ D+ KL V +++ L + +Y + + CRR ++ Y
Sbjct: 324 RDGLEGHCLMFYKYEDIVKLEKFNKDKPVNERENAKVLLQEMAAYA-ESSVCRRRVLLHY 382
Query: 206 FDEAWSDTECRGMCDHCRGGRRDA 229
F E+ ++ +C G CD+C+ +RDA
Sbjct: 383 FGESLNE-DC-GFCDNCK-KKRDA 403
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|325103763|ref|YP_004273417.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
gi|324972611|gb|ADY51595.1| ATP-dependent DNA helicase RecQ [Pedobacter saltans DSM 12145]
Length = 728
Score = 130 bits (327), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 109/202 (53%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K KD + + + +SGI+Y S K+ E++ L G+R YHA
Sbjct: 212 FYEVRPKGNVFKDIIKYI-----KNNPGKSGIVYCLSRKKVEEVANALEINGIRSLPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ V +IAFG+GIDKP+VR+VIHH + KSME +YQE+GRAG
Sbjct: 267 GLDAKVRADTQDKFLMEEVDVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +CI +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGYCIAFYSEKDVDKLAKFMKDKPVSEREIGTQILKEVIDYS-ESAVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C MCD+CR ++
Sbjct: 386 FGENFNEAGCGEMCDNCRAQKQ 407
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KSME +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHHDIPKSMEGYYQ 320
>gi|409098551|ref|ZP_11218575.1| ATP-dependent DNA helicase RecQ [Pedobacter agri PB92]
Length = 729
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 77/202 (38%), Positives = 108/202 (53%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K +D E+ + +SGIIY S K+ E++ E L G+ YHA
Sbjct: 212 FYEIRPK----RDITKEIIKYIKSN-PGKSGIIYCLSRKKVEEVAEALNLNGISALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE V +IAFG+GIDKP+VRFVIHH + KSME +YQE+GRAG
Sbjct: 267 GLEPKVRAETQDKFLMEDAEVIVATIAFGMGIDKPDVRFVIHHDVPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGVCIAFYAQKDVDKLAKFMKDKPVSEREIGTQILKEVIDYA-ESGVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++T C MCD+C+ ++
Sbjct: 386 FGENFNETGCNCMCDNCKKPKK 407
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 38/85 (44%), Positives = 49/85 (57%), Gaps = 14/85 (16%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ------------VRIKPAAQKDCLDELADL 69
+IAFG+GIDKP+VRFVIHH + KSME +YQ V I AQKD +D+LA
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDVPKSMEGYYQETGRAGRDGGEGVCIAFYAQKD-VDKLAKF 349
Query: 70 MSRRFRNQSGIIYTTSIKECEDLRE 94
M + ++ I T +KE D E
Sbjct: 350 MKDKPVSERE-IGTQILKEVIDYAE 373
>gi|395747150|ref|XP_002825880.2| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Pongo abelii]
Length = 1398
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 871 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDDCQVICATIAF 930
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KSME +YQESGRAGRDG+++HC+L+Y DV +L ++ ++
Sbjct: 931 GMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEMSHCLLFYTYHDVTRLKRLIMMEK 990
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 991 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1047
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KSME +YQ
Sbjct: 926 ATIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 956
>gi|403215321|emb|CCK69820.1| hypothetical protein KNAG_0D00680 [Kazachstania naganishii CBS
8797]
Length = 881
Score = 130 bits (326), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 70/200 (35%), Positives = 107/200 (53%), Gaps = 28/200 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQ P K + + + + FR QSGIIY S CE L L+ G+ YHA
Sbjct: 430 FYQS--IPKNNKTSIPLIVNSLKTVFRGQSGIIYCHSKIACEKLTALLKKEGINCRFYHA 487
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDK +VRFV H+ + +++EN+YQE+GRAG
Sbjct: 488 GMDTTDRELVQRGWQANQIQVIIATIAFGMGIDKSDVRFVFHYTVPRTLENYYQETGRAG 547
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-----FDQQTGLA---NLYNIVSYCLDQTRCRRAII 202
RDG+ ++CI +Y D+ L M+ D+ L NL ++++C + CRR +I
Sbjct: 548 RDGKFSYCITFYSFADIRTLQKMIQRDRKLDKSNKLKQLENLQQVMNFCDNMIDCRRKLI 607
Query: 203 ASYFDEAWSDTECRGMCDHC 222
SYF+E++ +C CD+C
Sbjct: 608 LSYFNESFDVKDCNNNCDNC 627
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV +IAFG+GIDK +VRFV H+ + +++EN+YQ
Sbjct: 501 WQANQIQVIIATIAFGMGIDKSDVRFVFHYTVPRTLENYYQ 541
>gi|209882405|ref|XP_002142639.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
gi|209558245|gb|EEA08290.1| ATP-dependent DNA helicase, RecQ family protein [Cryptosporidium
muris RN66]
Length = 997
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 118/237 (49%), Gaps = 52/237 (21%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
+ F L D+PN+R Y+VR K + + E+ +++S+ F + + IIY
Sbjct: 410 VVFALSFDRPNLR--------------YEVRPKIGNKAKLVKEVTEIISK-FSHSTCIIY 454
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S ECED+ +EL G+ + YH ++ ++AFG+GI+K
Sbjct: 455 CLSRSECEDICKELIKNGISATYYHGSMKDEKRNIAQKQWMSDEKQVMVATVAFGMGINK 514
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---------- 174
+VR VIH + KS+EN+YQESGRAGRDG + CILYY DV +L ++
Sbjct: 515 KDVRLVIHLSMPKSLENYYQESGRAGRDGMESLCILYYSYKDVVRLQALTDINVENSNKK 574
Query: 175 ----FDQQ----TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
D + L L IV YC +Q CRR+II +F E + CR CD+CR
Sbjct: 575 YRRNNDSKNRGDNSLHALLGIVKYCEEQYECRRSIILRHFGEIFGGL-CRVQCDNCR 630
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GI+K +VR VIH + KS+EN+YQ
Sbjct: 494 WMSDEKQVMVATVAFGMGINKKDVRLVIHLSMPKSLENYYQ 534
>gi|256419821|ref|YP_003120474.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
gi|256034729|gb|ACU58273.1| ATP-dependent DNA helicase RecQ [Chitinophaga pinensis DSM 2588]
Length = 733
Score = 129 bits (325), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 114/203 (56%), Gaps = 28/203 (13%)
Query: 49 FYQVRIKPAAQKD-CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y++R P +KD + E+ + + + +SGIIYT + K E+L + L ++ AYH
Sbjct: 213 YYEIR--PKRKKDQTIREIVKFIHQH-KGKSGIIYTLNRKTTEELADMLVANNIKAVAYH 269
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L++ +IAFG+GIDKP+VRFVIH+ + KS+EN+YQE+GRA
Sbjct: 270 AGLDAGTRAQRQDMFLHEDVDVIVATIAFGMGIDKPDVRFVIHYNIPKSLENYYQETGRA 329
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG C+ +Y DV KL ++ D+ + G + V+Y + + CRR +I
Sbjct: 330 GRDGLEGICVCFYSYKDVQKLEHLMRDKPLSEREMGAQLINETVAYA-ESSACRRKVILH 388
Query: 205 YFDEAWSDTECRGMCDHCRGGRR 227
YF E + +++C CD+CR +
Sbjct: 389 YFGEKYEESQCNNACDNCRNPKE 411
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+EN+YQ
Sbjct: 295 TIAFGMGIDKPDVRFVIHYNIPKSLENYYQ 324
>gi|223998386|ref|XP_002288866.1| probable atp-dependent DNA helicase Q5 [Thalassiosira pseudonana
CCMP1335]
gi|220975974|gb|EED94302.1| probable atp-dependent DNA helicase Q5 [Thalassiosira pseudonana
CCMP1335]
Length = 515
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 116/205 (56%), Gaps = 31/205 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y V+ KP + ++++ D + NQ+GIIYT S KE +++ ++L ++G+ AYH+
Sbjct: 226 YSVKTKPDGKDAIVNDMVDFIKTNHSNQAGIIYTFSRKEADNVADQLCDKGIIARAYHSD 285
Query: 110 L---------------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ E+ V +IAFGLGI+KP+VRFV+HH +SKS+E +YQESGRAGR
Sbjct: 286 VADARKDNIHRSWMRNETQVVVATIAFGLGINKPDVRFVLHHSISKSLEAYYQESGRAGR 345
Query: 152 DGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCL---DQTRCRRAIIASYFDE 208
DGQ A C+LYY DV K+ M+ + G +++V Y D + CR AI+ + E
Sbjct: 346 DGQPADCVLYYSPKDVPKMLGMIHG-EAGEPTFWHMVRYGQAHGDDSLCRLAIL-NILGE 403
Query: 209 AWSDTECRGM------CDHCRGGRR 227
A DT GM D C +R
Sbjct: 404 A--DTSQAGMERLERLADQCATTKR 426
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 16 TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
T +IAFGLGI+KP+VRFV+HH +SKS+E +YQ
Sbjct: 303 TQVVVATIAFGLGINKPDVRFVLHHSISKSLEAYYQ 338
>gi|190348308|gb|EDK40739.2| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC
6260]
Length = 1176
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHC-------LSKSMEN---FYQVRIKPAAQ 59
+N+++ + + + VR +IHH L +S FY+++ K
Sbjct: 669 MNMFKQQYPNIPLMALTATANEKVRMDIIHHLNMTEPVLLKQSFNRTNLFYEIKRK---N 725
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ L+ + D + ++ + +GIIY S + CE E+L GL+ S YHA +
Sbjct: 726 GNYLEWIRDYIVAKYAHNTGIIYCHSKQSCEQTSEKLNMWGLKTSFYHAGMGPTERFDIQ 785
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAGRDG+ + CI++
Sbjct: 786 KKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMF 845
Query: 162 YRLPDVFKLSSMV-----FDQQT---GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L SM+ D+++ L L +V YC + T CRR + YF+E +
Sbjct: 846 YSYKDARSLQSMIQRDSDLDRESRENHLNKLRQVVQYCENTTDCRRKQVLHYFNEHFDPL 905
Query: 214 ECRGMCDHC 222
+C CD+C
Sbjct: 906 QCSKKCDNC 914
>gi|365987708|ref|XP_003670685.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
gi|343769456|emb|CCD25442.1| hypothetical protein NDAI_0F01230 [Naumovozyma dairenensis CBS 421]
Length = 1110
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 68/201 (33%), Positives = 107/201 (53%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V K KD +DE+ D + F QSGIIY S CE + +L+N +R YHA
Sbjct: 672 FYEVLRK---DKDSIDEMIDAIKYHFTEQSGIIYCHSKNSCEKVALQLQNNQIRCGYYHA 728
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + ++AFG+GIDK +VRF+ H + +++E +YQE+GRAG
Sbjct: 729 GMDPDERMMIQRDWQRNKLQVICATVAFGMGIDKSDVRFIYHFTVPRTLEGYYQETGRAG 788
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG+ ++CI YY + DV + M+ ++ L ++ YC + CRR ++
Sbjct: 789 RDGKPSYCIGYYSMKDVRAIQKMIQKDSSLDKISREKHFDKLQEVMKYCENIKECRRKLV 848
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
SYF+E + C CD+C+
Sbjct: 849 LSYFNEEFDRNLCHENCDNCK 869
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + QV ++AFG+GIDK +VRF+ H + +++E +YQ
Sbjct: 742 WQRNKLQVICATVAFGMGIDKSDVRFIYHFTVPRTLEGYYQ 782
>gi|258574619|ref|XP_002541491.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
gi|237901757|gb|EEP76158.1| hypothetical protein UREG_01007 [Uncinocarpus reesii 1704]
Length = 1432
Score = 129 bits (325), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 127/255 (49%), Gaps = 38/255 (14%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENFYQVRIKP-----AAQKDCLD 64
L +R F V + NV VIH+ + E F Q +P K D
Sbjct: 776 LGEFRREFRGVPLMALTATATKNVEVDVIHNLGMQGCETFTQSFNRPNLTYEVRTKVNYD 835
Query: 65 ELADLMSRRFR---NQSGIIYTTSIKECEDLREELR-NRGLRVSAYHAKLESN------- 113
E + +SR ++GIIY S K CE L +LR +R + YHA ++++
Sbjct: 836 ETLESISRIIDFHYGKTGIIYCLSRKNCERLATDLRVKHQIRATHYHAGMDADQRIDVQR 895
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C L+Y
Sbjct: 896 KWQSGEHQVIVATIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGKRSECFLFY 955
Query: 163 RLPDVFKLSSMVFDQQTGLAN----------LYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
D + ++ D ++G + L +++ +C +++ CRR I +YF E +
Sbjct: 956 GYRDAIAIRKIIDDDKSGKKDGQQKERQHQMLQHVIQFCQNKSDCRRVQILAYFSEDFKR 1015
Query: 213 TECRGMCDHCRGGRR 227
CR CD+C+ G +
Sbjct: 1016 ENCRLSCDNCQSGSK 1030
>gi|242219722|ref|XP_002475637.1| predicted protein [Postia placenta Mad-698-R]
gi|220725158|gb|EED79158.1| predicted protein [Postia placenta Mad-698-R]
Length = 457
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 109/200 (54%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR+K +K DE+ + + + +N+SG+IY +S +CE++ + LR++ GL+ YHA
Sbjct: 215 YEVRLK---KKKVTDEIVNFIVTKHKNESGVIYCSSKVKCEEVAKNLRDKYGLKARHYHA 271
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +IA G+GIDK NVRFVIH+ + S+E +YQE+GRAG
Sbjct: 272 GLDDRDRTVTMQEWKRGDFKIIVATIALGMGIDKGNVRFVIHYAMPSSLEGYYQETGRAG 331
Query: 151 RDGQIAHCILYYRLPDVFKL-------SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG+ A CILYY D + S +++ ++ +C++ CRR +
Sbjct: 332 RDGKPADCILYYSGSDAHPVWRRINEESIPETEKEKQRDTFRRVIQFCVNNVDCRRRQVL 391
Query: 204 SYFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 392 GFFGEVFDSASCRKGCDNCR 411
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +++ +IA G+GIDK NVRFVIH+ + S+E +YQ
Sbjct: 285 WKRGDFKIIVATIALGMGIDKGNVRFVIHYAMPSSLEGYYQ 325
>gi|398390493|ref|XP_003848707.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
gi|339468582|gb|EGP83683.1| ATP-dependent DNA helicase RecQ [Zymoseptoria tritici IPO323]
Length = 1455
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 114/203 (56%), Gaps = 30/203 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
+Y+VR K + D ++ +A+L+ Q+GIIY S K+CE + E LR + ++ YH
Sbjct: 796 YYEVRKKAKGKGD-IESIANLIKEDHHKQTGIIYCFSRKDCEGMAEALRKQHSIKAHHYH 854
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L+S +IAFG+GIDK NVRFVIHH + KS+E +YQE+GRA
Sbjct: 855 AGLKSEEKSQVQKKWQAGTYHVIVATIAFGMGIDKGNVRFVIHHTIPKSLEGYYQETGRA 914
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMV---------FDQQTGLANLYNI-VSYCLDQTRCRR 199
GRDG + C L+Y D K+ M+ ++Q+ +++ + + +C +++ CRR
Sbjct: 915 GRDGLDSACYLFYGYGDATKVRRMIDKDDENTTSWEQKQRQHHMFRLMIQFCENKSDCRR 974
Query: 200 AIIASYFDEAWSDTECRGMCDHC 222
+ YF+E ++ +C CD+C
Sbjct: 975 VQVLRYFNEPFNKVDCEAKCDNC 997
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%), Gaps = 5/54 (9%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLD 64
W+ Y V +IAFG+GIDK NVRFVIHH + KS+E +YQ + A +D LD
Sbjct: 869 WQAGTYHVIVATIAFGMGIDKGNVRFVIHHTIPKSLEGYYQETGR--AGRDGLD 920
>gi|119193364|ref|XP_001247288.1| hypothetical protein CIMG_01059 [Coccidioides immitis RS]
gi|392863466|gb|EAS35781.2| RecQ family ATP-dependent DNA helicase [Coccidioides immitis RS]
Length = 1569
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 31/207 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR+K +D L+ +A ++ + ++GIIY S K CE + ++L + ++ + YHA
Sbjct: 912 YEVRVK-GNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHA 969
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 970 GMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAG 1029
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN----------LYNIVSYCLDQTRCRRA 200
RDG+ + C L+Y DV + ++ D++ G + L ++V +C +++ CRR
Sbjct: 1030 RDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRV 1089
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRR 227
I +YF E + C CD+C+ G +
Sbjct: 1090 QILAYFSENFKRENCMRTCDNCQSGSK 1116
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 983 WQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQ 1023
>gi|302832866|ref|XP_002947997.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
gi|300266799|gb|EFJ50985.1| hypothetical protein VOLCADRAFT_57553 [Volvox carteri f.
nagariensis]
Length = 646
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 114/212 (53%), Gaps = 40/212 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+V KPAA D + + + R + R +SGI+Y + K+CE + EL G+ YH
Sbjct: 246 FYEVLPKPAAAADAIAAIVAWIHRHYPRGESGIVYCLTRKDCETVASELAAGGVSARHYH 305
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ----- 144
A +E ++AFG+GI+KP+VRFV+HH LSKS+EN+YQ
Sbjct: 306 ADMEPGPREAAHAAWSAGKVQVMVATVAFGMGINKPDVRFVVHHSLSKSLENYYQAGSRL 365
Query: 145 -ESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYC------------ 191
ESGRAGRDG A C+++YR D + +++V + T ANL ++ Y
Sbjct: 366 IESGRAGRDGLPARCLMFYRFSDALRQAAIVCFEPTWEANLNAMMLYAAAAVPGSGSGDS 425
Query: 192 -LDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ CRRAII +F EA ECR MCD+C
Sbjct: 426 GDGGSSCRRAIIQRHFAEA--PAECRCMCDNC 455
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/42 (57%), Positives = 32/42 (76%), Gaps = 3/42 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQV 52
W QV ++AFG+GI+KP+VRFV+HH LSKS+EN+YQ
Sbjct: 320 WSAGKVQVMVATVAFGMGINKPDVRFVVHHSLSKSLENYYQA 361
>gi|303312131|ref|XP_003066077.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
gi|240105739|gb|EER23932.1| DNA helicase recq1, putative [Coccidioides posadasii C735 delta
SOWgp]
Length = 1310
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 31/207 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR+K +D L+ +A ++ + ++GIIY S K CE + ++L + ++ + YHA
Sbjct: 653 YEVRVK-GNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHA 710
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 711 GMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAG 770
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN----------LYNIVSYCLDQTRCRRA 200
RDG+ + C L+Y DV + ++ D++ G + L ++V +C +++ CRR
Sbjct: 771 RDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRV 830
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRR 227
I +YF E + C CD+C+ G +
Sbjct: 831 QILAYFSENFKRENCMRTCDNCQSGSK 857
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 724 WQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQ 764
>gi|348580071|ref|XP_003475802.1| PREDICTED: Bloom syndrome protein-like [Cavia porcellus]
Length = 1405
Score = 129 bits (324), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 99/177 (55%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------------VSIAF 118
SGIIY S EC+ + + L+ GL AYHA L +IAF
Sbjct: 877 SGIIYCLSRWECDTMADTLQKDGLAALAYHAGLSDAARDEVQHKWINQDGCQVICATIAF 936
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 937 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 996
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
++T NLY++V YC + T CRR + +YF E + E CR CD+C
Sbjct: 997 DGNRHTKETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPEFCRKHPDVSCDNC 1053
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 932 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 962
>gi|320040058|gb|EFW21992.1| RecQ helicase MUSN [Coccidioides posadasii str. Silveira]
Length = 1569
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 116/207 (56%), Gaps = 31/207 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR+K +D L+ +A ++ + ++GIIY S K CE + ++L + ++ + YHA
Sbjct: 912 YEVRVK-GNHEDVLENIAKIIDFHY-GKTGIIYCLSRKNCEKVAKDLCTKYHVKATHYHA 969
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAG
Sbjct: 970 GMAPDDRIRVQREWQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQETGRAG 1029
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN----------LYNIVSYCLDQTRCRRA 200
RDG+ + C L+Y DV + ++ D++ G + L ++V +C +++ CRR
Sbjct: 1030 RDGKRSECFLFYGYRDVVAIRKIIDDEKNGRKDRQQKDRQHQMLQHVVQFCQNKSDCRRV 1089
Query: 201 IIASYFDEAWSDTECRGMCDHCRGGRR 227
I +YF E + C CD+C+ G +
Sbjct: 1090 QILAYFSENFKRENCMRTCDNCQSGSK 1116
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ + V +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct: 983 WQDGKHNVIVATIAFGMGIDKPDVRFVIHHTIPKSLEGYYQ 1023
>gi|119622512|gb|EAX02107.1| Bloom syndrome, isoform CRA_a [Homo sapiens]
Length = 1392
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 865 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 924
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 925 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 984
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 985 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1041
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 920 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 950
>gi|345315332|ref|XP_001515695.2| PREDICTED: Bloom syndrome protein [Ornithorhynchus anatinus]
Length = 865
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 105/189 (55%), Gaps = 33/189 (17%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + LR GL AYHA L + +IAF
Sbjct: 310 SGIIYCLSRRECDTMALTLRKDGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATIAF 369
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 370 GMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYSYHDVIRLKRLILMEK 429
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHCRGG 225
+QT NLY++V YC + CRR + SYF E ++ C+ CD+C
Sbjct: 430 DGNSHTRQTHFNNLYSMVHYCENIAECRRIQLLSYFGENGFNPNFCKEHLDVACDNC-CQ 488
Query: 226 RRDAKRVDV 234
++D K DV
Sbjct: 489 KKDYKSRDV 497
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 365 ATIAFGMGIDKPDVRYVIHASLPKSVEGYYQ 395
>gi|4557365|ref|NP_000048.1| Bloom syndrome protein [Homo sapiens]
gi|1705486|sp|P54132.1|BLM_HUMAN RecName: Full=Bloom syndrome protein; AltName: Full=DNA helicase,
RecQ-like type 2; Short=RecQ2; AltName: Full=RecQ
protein-like 3
gi|1072122|gb|AAA87850.1| Bloom's syndrome protein [Homo sapiens]
gi|58003498|gb|AAW62255.1| Bloom syndrome [Homo sapiens]
gi|62739395|gb|AAH93622.1| Bloom syndrome [Homo sapiens]
gi|75517719|gb|AAI01568.1| Bloom syndrome [Homo sapiens]
gi|92096020|gb|AAI15033.1| Bloom syndrome [Homo sapiens]
gi|92097932|gb|AAI15031.1| Bloom syndrome [Homo sapiens]
gi|119622513|gb|EAX02108.1| Bloom syndrome, isoform CRA_b [Homo sapiens]
Length = 1417
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 975
>gi|332238724|ref|XP_003268551.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein [Nomascus
leucogenys]
Length = 1417
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 975
>gi|196013025|ref|XP_002116374.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
gi|190580965|gb|EDV21044.1| hypothetical protein TRIADDRAFT_30770 [Trichoplax adhaerens]
Length = 752
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 108/190 (56%), Gaps = 32/190 (16%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SNV------ 114
E+ +++ +FRN+SGI+Y S EC+ + LR G+ +YHA L+ +NV
Sbjct: 311 EIIKIVNSQFRNESGIVYCLSRNECDRVSSTLREAGIAALSYHAGLDAKERTNVQKRWIT 370
Query: 115 ---------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDK +VRFVIH+ L KS E +YQESGRAGRDG +A CIL+Y
Sbjct: 371 ENRCKIVCATIAFGMGIDKADVRFVIHYSLPKSTEGYYQESGRAGRDGMLAKCILFYTYG 430
Query: 166 DVFKLSSMVF-----DQQTG---LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CR 216
D ++ M+ +Q+T L NLY +V YC + + CRR + YF E+ E CR
Sbjct: 431 DACRIRRMINSERDQNQETKRVHLDNLYRMVQYCENVSDCRRVQLLEYFGESTFKRETCR 490
Query: 217 G----MCDHC 222
CD+C
Sbjct: 491 NNRATSCDNC 500
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK +VRFVIH+ L KS E +YQ
Sbjct: 380 TIAFGMGIDKADVRFVIHYSLPKSTEGYYQ 409
>gi|189054874|dbj|BAG36927.1| unnamed protein product [Homo sapiens]
Length = 1417
Score = 129 bits (324), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 890 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQGGCQVICATIAF 949
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 950 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 1009
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
G NLY++V YC + T CRR + +YF E + + C+ CD+C
Sbjct: 1010 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1066
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 945 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 975
>gi|395861752|ref|XP_003803142.1| PREDICTED: Bloom syndrome protein [Otolemur garnettii]
Length = 1389
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 106/189 (56%), Gaps = 33/189 (17%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------------VSIAF 118
SGIIY S +EC+ + LR GL AYHA L + ++AF
Sbjct: 880 SGIIYCLSRRECDTMAGTLRKDGLAALAYHAGLSDSERDEVQHKWINQDGCQVICATVAF 939
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+++HC+L+Y DV +L ++
Sbjct: 940 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEMSHCLLFYTYHDVTRLKRLIMMEK 999
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHCRGG 225
++T NLY++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 1000 DGNHHTKETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKYPDVSCDNC-CK 1058
Query: 226 RRDAKRVDV 234
R+D K DV
Sbjct: 1059 RKDYKIRDV 1067
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 935 ATVAFGMGIDKPDVRFVIHASLPKSVEGYYQ 965
>gi|426380348|ref|XP_004056835.1| PREDICTED: Bloom syndrome protein [Gorilla gorilla gorilla]
Length = 1377
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 850 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 909
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 910 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 969
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
G NLY++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 970 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 1026
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 905 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 935
>gi|409046313|gb|EKM55793.1| hypothetical protein PHACADRAFT_95968 [Phanerochaete carnosa
HHB-10118-sp]
Length = 620
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 107/199 (53%), Gaps = 29/199 (14%)
Query: 64 DELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---------- 113
D++A +++ ++R ++GIIY +S +CE ++LR G+ YHA L +
Sbjct: 319 DDIARMINSQYRGKTGIIYYSSRDKCETFAKQLRKAGIVAEHYHASLPVSEKERVQQQWQ 378
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH L S+ ++YQE+GRAGRDG + CILYY
Sbjct: 379 AGHVKVIVATIAFGMGIDKPDVRFVIHCSLPNSLSDYYQETGRAGRDGLPSDCILYYHYS 438
Query: 166 DVFKLSSMVFDQ----------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D + ++ + ++ +V YCL+ CRR + +YFDE + +C
Sbjct: 439 DAHFIMRRAREEAWERRNADHADNAIEHIRRVVQYCLNAVNCRRQQVLAYFDEQFDPEDC 498
Query: 216 RGMCDHCRGGRRDAKRVDV 234
CD+C+ + A VDV
Sbjct: 499 HDFCDNCK-DKTPAIAVDV 516
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +V +IAFG+GIDKP+VRFVIH L S+ ++YQ
Sbjct: 377 WQAGHVKVIVATIAFGMGIDKPDVRFVIHCSLPNSLSDYYQ 417
>gi|219518767|gb|AAI43281.1| BLM protein [Homo sapiens]
Length = 1042
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 72/177 (40%), Positives = 101/177 (57%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 515 SGIIYCLSRRECDTMADTLQRDGLAALAYHAGLSDSARDEVQQKWINQDGCQVICATIAF 574
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++
Sbjct: 575 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEK 634
Query: 179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
G NLY++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 635 DGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 691
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 570 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 600
>gi|116180606|ref|XP_001220152.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
gi|88185228|gb|EAQ92696.1| hypothetical protein CHGG_00931 [Chaetomium globosum CBS 148.51]
Length = 1451
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 84/252 (33%), Positives = 121/252 (48%), Gaps = 39/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN---FYQVRIKPAAQKDCLDELA 67
L +R +F V + NV + H LS MEN F Q +P + + + A
Sbjct: 724 LGTFRAAFPGVPVMALTATATKNVMADVKHNLS--MENCEIFTQSFNRPNLYYEVIPKAA 781
Query: 68 -------DLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESNV----- 114
L++ ++ Q GI+Y S K E L + ++ YHA+++
Sbjct: 782 RFIGGMGKLITTKYPGQCGIVYCLSRKSAEGTATALVTKHNIKARYYHAQMDPEAKVEVQ 841
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + KS+E +YQE+GRAGRDG + C LY
Sbjct: 842 EKWQKGEVHVVVATIAFGMGIDKPDVRFVIHQNMPKSLEGYYQETGRAGRDGNPSDCYLY 901
Query: 162 YRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
+ D+ L MV +++ A + +VSYC CRR I YFDEA++
Sbjct: 902 FAYSDIPTLRRMVNEDRDKQPAEKERQHAMINRMVSYCESSYACRRVQILRYFDEAFNAK 961
Query: 214 ECRGMCDHCRGG 225
EC MCD+C G
Sbjct: 962 ECGSMCDNCVAG 973
>gi|19114004|ref|NP_593092.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe 972h-]
gi|1175484|sp|Q09811.1|HUS2_SCHPO RecName: Full=ATP-dependent DNA helicase hus2/rqh1
gi|1019410|emb|CAA91177.1| RecQ type DNA helicase Rqh1 [Schizosaccharomyces pombe]
gi|1684754|emb|CAA70577.1| DNA-helicase [Schizosaccharomyces pombe]
Length = 1328
Score = 129 bits (323), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 105/200 (52%), Gaps = 30/200 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYH 107
FY+++ K KD EL +S ++SGIIY S CE + +LRN GL+ YH
Sbjct: 719 FYEIKPK----KDLYTELYRFISNGHLHESGIIYCLSRTSCEQVAAKLRNDYGLKAWHYH 774
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A LE +IAFG+G+DK +VRFVIHH KS+E +YQE+GRA
Sbjct: 775 AGLEKVERQRIQNEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQETGRA 834
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVF----DQQTGLAN---LYNIVSYCLDQTRCRRAII 202
GRDG+ AHCI++Y D ++ D +T L ++ +C ++T CRR +
Sbjct: 835 GRDGKPAHCIMFYSYKDHVTFQKLIMSGDGDAETKERQRQMLRQVIQFCENKTDCRRKQV 894
Query: 203 ASYFDEAWSDTECRGMCDHC 222
+YF E + CR CD C
Sbjct: 895 LAYFGENFDKVHCRKGCDIC 914
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 32/43 (74%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W++ Y++ +IAFG+G+DK +VRFVIHH KS+E +YQ
Sbjct: 787 NEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQ 829
>gi|397779827|ref|YP_006544300.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396938329|emb|CCJ35584.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 780
Score = 128 bits (322), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 122/245 (49%), Gaps = 36/245 (14%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFY-------QVRIKPAAQKDCL 63
L++ + F +V + P VR I LS + Y +R A +KD
Sbjct: 193 LSVLKEQFPEVPMIALTATAIPEVRQDIIRQLSLADPAVYVGSSNRENLRYTVAGKKDAY 252
Query: 64 DELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN---------- 113
+L D + R N+SGI+Y +S K E++ E LRN G+R YHA L N
Sbjct: 253 PQLIDYL-RSNPNRSGIVYFSSKKRTEEIAERLRNDGVRALPYHADLPDNYRHRVQEQFI 311
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+ AFG+GIDKP+VRFVIH+ + KS+E + QE+GRAGRDG+ + CIL+Y
Sbjct: 312 RDEIDVVCATNAFGMGIDKPDVRFVIHYDMPKSLEAYAQETGRAGRDGEASDCILFYSPG 371
Query: 166 DVFKLSSMVFDQQTGLANLY--------NIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
D K M+ +LY ++ ++C + TRCRR + YF E ++ C G
Sbjct: 372 DRRKNQVMLERDSLDRPDLYPVAVQKLNDMAAFC-ETTRCRREYLLRYFGETFTGVPC-G 429
Query: 218 MCDHC 222
CD C
Sbjct: 430 GCDIC 434
>gi|221044460|dbj|BAH13907.1| unnamed protein product [Homo sapiens]
Length = 519
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 112/207 (54%), Gaps = 37/207 (17%)
Query: 49 FYQVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y + KP DCL+ + + SGIIY S +EC+ + + L+ GL AYH
Sbjct: 51 YYVLPKKPKKVAFDCLE----WIRKHHPYDSGIIYCLSRRECDTMADTLQRDGLAALAYH 106
Query: 108 AKLESNV-------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
A L + +IAFG+GIDKP+VRFVIH L KS+E +YQESGR
Sbjct: 107 AGLSDSARDEVQQKWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGR 166
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC+L+Y DV +L ++ ++ G NLY++V YC + T CRR
Sbjct: 167 AGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLYSMVHYCENITECRRI 226
Query: 201 IIASYFDE-AWSDTECRG----MCDHC 222
+ +YF E ++ C+ CD+C
Sbjct: 227 QLLAYFGENGFNPDFCKKHPDVSCDNC 253
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 132 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 162
>gi|126273765|ref|XP_001368666.1| PREDICTED: Bloom syndrome protein [Monodelphis domestica]
Length = 1401
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/206 (37%), Positives = 113/206 (54%), Gaps = 37/206 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL +YHA L +
Sbjct: 861 DCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALSYHAGLSDSARDEVQH 916
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+
Sbjct: 917 KWINQDGCQVICATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQESGRAGRDGEMSHCLLF 976
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSD 212
Y DV +L ++ +QT NLY++V YC + CRR + SYF E ++
Sbjct: 977 YNYHDVTRLKRLILMEKDGNSHTRQTHFNNLYSMVHYCENIIECRRIQLLSYFGENGFNP 1036
Query: 213 TECRG----MCDHCRGGRRDAKRVDV 234
C+ CD+C ++D K DV
Sbjct: 1037 NFCKEYPDVTCDNC-CKKKDYKTRDV 1061
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 929 ATIAFGMGIDKPDVRYVIHSSLPKSVEGYYQ 959
>gi|146413823|ref|XP_001482882.1| hypothetical protein PGUG_04837 [Meyerozyma guilliermondii ATCC
6260]
Length = 1176
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 126/249 (50%), Gaps = 40/249 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHC-------LSKSMEN---FYQVRIKPAAQ 59
+N+++ + + + VR +IHH L +S FY+++ K
Sbjct: 669 MNMFKQQYPNIPLMALTATANEKVRMDIIHHLNMTEPVLLKQSFNRTNLFYEIKRK---N 725
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
+ L+ + D + ++ + +GIIY S + CE E+L GL+ S YHA +
Sbjct: 726 GNYLEWIRDYIVAKYAHNTGIIYCHSKQLCEQTSEKLNMWGLKTSFYHAGMGPTERFDIQ 785
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH + +S+E +YQE+GRAGRDG+ + CI++
Sbjct: 786 KKWQDGSVKIICATIAFGMGIDKPDVRFVIHLFIPRSLEGYYQETGRAGRDGKPSECIMF 845
Query: 162 YRLPDVFKLSSMV-----FDQQT---GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
Y D L SM+ D+++ L L +V YC + T CRR + YF+E +
Sbjct: 846 YSYKDARSLQSMIQRDSDLDRESRENHLNKLRQVVQYCENTTDCRRKQVLHYFNEHFDPL 905
Query: 214 ECRGMCDHC 222
+C CD+C
Sbjct: 906 QCSKKCDNC 914
>gi|83767361|dbj|BAE57500.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 809
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L +AD + + N+SGI+Y S C+ + + LR+ ++ YHA
Sbjct: 459 YEVRQKKKGN-ELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHA 517
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 518 GMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAG 577
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C +YY D ++ M+ D G L N+V +C +++ CRR I
Sbjct: 578 RDGKRSGCYMYYCYRDSMTITRMI-DSSDGSKQQKNRQRQMLRNVVQFCENKSDCRRVQI 636
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 637 LAYFNEHFRREDCNASCDNCK 657
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R+ +IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 535 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 571
>gi|389746803|gb|EIM87982.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 523
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 42/219 (19%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
++PN+ + + L + NF +V +A + Q+GI+Y C
Sbjct: 209 NRPNLHYTV---LPRPGRNFTKV-------------IASYIKGSHPKQAGIVYCIGRSTC 252
Query: 90 EDLREELRNRGLRVSAYHAKL---------------ESNV---SIAFGLGIDKPNVRFVI 131
E + ELR GL S +H + ES++ +IAFG+GI KPNVRF+I
Sbjct: 253 ERVAAELRGYGLSASHFHGAMLDSEKQYTMESWLSGESDIVVATIAFGMGIHKPNVRFII 312
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ--------QTGLAN 183
HH L S+ N+YQE+GRAGRDG A CILYY D L S + D+ Q L
Sbjct: 313 HHGLPSSLTNYYQETGRAGRDGLPADCILYYSWKDCAFLLSRIQDKPNLREEDRQRQLHE 372
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ ++ + L++T CRR I +FDE ++ C G CD+C
Sbjct: 373 VEQVIHFVLNETDCRRVQILQHFDEQFNRHACNGTCDNC 411
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 48/92 (52%), Gaps = 29/92 (31%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK------PA------AQKDCLDELADL 69
+IAFG+GI KPNVRF+IHH L S+ N+YQ + PA + KDC A L
Sbjct: 296 TIAFGMGIHKPNVRFIIHHGLPSSLTNYYQETGRAGRDGLPADCILYYSWKDC----AFL 351
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
+SR I++ +LREE R R L
Sbjct: 352 LSR-------------IQDKPNLREEDRQRQL 370
>gi|449329518|gb|AGE95789.1| ATP-dependent DNA helicase [Encephalitozoon cuniculi]
Length = 766
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K + + LD +A + F + GIIY TS KECE + E+LR + + + YHA
Sbjct: 434 YEVRAKTSTVE--LD-IASFVQTHFPDCCGIIYCTSKKECEMISEKLR-KYMGTAFYHAG 489
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L N +IAFG+GIDK +VRFVIH+C+ KS+E +YQE+GRAGR
Sbjct: 490 LSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 549
Query: 152 DGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + C+L+Y D K+S M+ ++Q Q +L ++ +C ++T CRR + +
Sbjct: 550 DGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDLEAVIQFCENKTDCRRMQVLA 609
Query: 205 YFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 610 HFGERFDPQMCRKTCDNCR 628
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIH+C+ KS+E +YQ
Sbjct: 502 WNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQ 542
>gi|67468457|ref|XP_650264.1| recQ family helicase [Entamoeba histolytica HM-1:IMSS]
gi|56466865|gb|EAL44882.1| recQ family helicase, putative [Entamoeba histolytica HM-1:IMSS]
gi|449710010|gb|EMD49159.1| recQ family helicase [Entamoeba histolytica KU27]
Length = 774
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 52/234 (22%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-PAAQKDCLDELADLMSRRFRNQSGI 80
+I F ++PN+R Y+ R+K P + D + ++ NQ GI
Sbjct: 565 AIVFNQTFNRPNLR--------------YETRVKSPKVEVDIAHYI-----QQHPNQCGI 605
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
++ S K+CE L + L N G+R + YHA L++ ++AFG+GI
Sbjct: 606 VFCLSKKDCESLSKFLINYGIRATHYHAGLDAKRRKKVQNDWMNGTFLVVCATVAFGMGI 665
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL---------SSM 173
DKP+VRFVIH + S+E ++QESGRAGRDG+ + CI+Y+ + D+ ++ + +
Sbjct: 666 DKPDVRFVIHQTMPSSIEQYFQESGRAGRDGKPSDCIIYFSMKDIARVEWLKRDMGKNEL 725
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
QQ + + N+ C+ + CRR I YFDE++++ +C G CD+C ++
Sbjct: 726 TASQQQSINAMVNL---CI-TSECRRKIQLMYFDESFNEEKCTG-CDNCERKKK 774
>gi|238487580|ref|XP_002375028.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
gi|317143477|ref|XP_001819502.2| recQ family helicase MusN [Aspergillus oryzae RIB40]
gi|220699907|gb|EED56246.1| RecQ family helicase MusN [Aspergillus flavus NRRL3357]
Length = 1524
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L +AD + + N+SGI+Y S C+ + + LR+ ++ YHA
Sbjct: 906 YEVRQKKKGN-ELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHA 964
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 965 GMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAG 1024
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C +YY D ++ M+ D G L N+V +C +++ CRR I
Sbjct: 1025 RDGKRSGCYMYYCYRDSMTITRMI-DSSDGSKQQKNRQRQMLRNVVQFCENKSDCRRVQI 1083
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 1084 LAYFNEHFRREDCNASCDNCK 1104
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R+ +IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 982 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 1018
>gi|149690733|ref|XP_001502766.1| PREDICTED: Bloom syndrome protein [Equus caballus]
Length = 1421
Score = 128 bits (321), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 100/177 (56%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S +EC+ + + L+ GL AYHA L + +IAF
Sbjct: 896 SGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDAVQHKWINQDGCQVICATIAF 955
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++
Sbjct: 956 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILMEK 1015
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
++T NLY++V YC + CRR + +YF E ++ C+ CD+C
Sbjct: 1016 DGNHHTKETHFNNLYSMVHYCENIAECRRIQLLAYFGEHGFNPDFCKKYPDVSCDNC 1072
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 951 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 981
>gi|449471881|ref|XP_004175079.1| PREDICTED: LOW QUALITY PROTEIN: Bloom syndrome protein homolog
[Taeniopygia guttata]
Length = 1069
Score = 127 bits (320), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/206 (38%), Positives = 112/206 (54%), Gaps = 36/206 (17%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------ 113
DCL+ + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 605 DCLE----WIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQQ 660
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+
Sbjct: 661 KWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLF 720
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSD 212
Y DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 721 YSYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVECRRVQLLAYFGETNFNP 780
Query: 213 TECRG----MCDHCRGGRRDAKRVDV 234
T C+ +CD+C + R DV
Sbjct: 781 TFCKDHPEVICDNCSRKKDYKSRNDV 806
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 673 ATIAFGMGIDKPDVRYVIHASLPKSIEGYYQ 703
>gi|123494203|ref|XP_001326459.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909374|gb|EAY14236.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1081
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 114/217 (52%), Gaps = 33/217 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V K ++ L + + +RN +GI++ S E E + + ++ GL YHA
Sbjct: 574 FYEVMKKETGFREAA--LKWIEEKNYRNSTGIVFCMSTAETEQIAKFFQDNGLSAKFYHA 631
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K++ N ++AFG+GIDKP+VR+VIH + KS+E +YQESGRAG
Sbjct: 632 KMDKNDRKMTQIEWTKGRVKVIVATLAFGMGIDKPDVRYVIHMTMPKSLEEYYQESGRAG 691
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF--DQQTGLAN-----------LYNIVSYCLDQTRC 197
RDG+ +H +L + + D K+ M+ DQ TG L ++ Y +++ C
Sbjct: 692 RDGKQSHALLMFSMGDKSKVHRMITMADQNTGETKSRERIEVEDQLLNHMTEYGIEKMTC 751
Query: 198 RRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
RR ++ YF E + C CD+C+ ++ +++D+
Sbjct: 752 RRVLLLRYFGENFDPKNCNTTCDNCQRRMKNHEKIDI 788
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VR+VIH + KS+E +YQ
Sbjct: 655 ATLAFGMGIDKPDVRYVIHMTMPKSLEEYYQ 685
>gi|391864070|gb|EIT73368.1| ATP-dependent DNA helicase [Aspergillus oryzae 3.042]
Length = 1174
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K + L +AD + + N+SGI+Y S C+ + + LR+ ++ YHA
Sbjct: 556 YEVRQKKKGN-ELLASIADTIKSSYHNKSGIVYCLSRDTCQKVAKSLRDDYRIKAEHYHA 614
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ + +IAFG+GIDKP+VRFVIHH L KS+E +YQE+GRAG
Sbjct: 615 GMKPDERAEVQQRWQAGRSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQETGRAG 674
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAII 202
RDG+ + C +YY D ++ M+ D G L N+V +C +++ CRR I
Sbjct: 675 RDGKRSGCYMYYCYRDSMTITRMI-DSSDGSKQQKNRQRQMLRNVVQFCENKSDCRRVQI 733
Query: 203 ASYFDEAWSDTECRGMCDHCR 223
+YF+E + +C CD+C+
Sbjct: 734 LAYFNEHFRREDCNASCDNCK 754
Score = 56.6 bits (135), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R+ +IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 632 RSHVIVATIAFGMGIDKPDVRFVIHHSLPKSLEGYYQ 668
>gi|303390001|ref|XP_003073232.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
gi|303302377|gb|ADM11872.1| ATP-dependent DNA helicase [Encephalitozoon intestinalis ATCC
50506]
Length = 762
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 114/199 (57%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K + + LD + + F + GIIY TS KECE + E+L+ + ++ + YHA
Sbjct: 430 YEVRAKTSTVE--LD-IVSFVQTHFPDCCGIIYCTSKKECEMISEKLK-KHMKTAFYHAG 485
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L N +IAFG+GIDK +VRFVIH+C+ KS+E +YQE+GRAGR
Sbjct: 486 LSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 545
Query: 152 DGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + C+L+Y D K+S M+ ++Q Q +L ++ +C ++T CRR + +
Sbjct: 546 DGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQKEDLEAVIQFCENKTDCRRMQVLA 605
Query: 205 YFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 606 HFGEKFDPQLCRKTCDNCR 624
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIH+C+ KS+E +YQ
Sbjct: 498 WNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQ 538
>gi|392567504|gb|EIW60679.1| ATP-dependent DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 553
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 74/211 (35%), Positives = 118/211 (55%), Gaps = 32/211 (15%)
Query: 42 LSKSMENF-YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR- 99
LS + +N Y+VR+K +KD + ++A + +GI+Y TS CE++ + LR +
Sbjct: 199 LSFNRQNLDYEVRLK---KKDPVGDMAAYILENHPRDTGIVYCTSRDRCEEVAKMLREKY 255
Query: 100 GLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMEN 141
L YHA++ +IAFG+GIDK VRFVIH + S++
Sbjct: 256 NLSARHYHAQVADGDKNRVQELWSSGEVQIIVATIAFGMGIDKAEVRFVIHFSIPGSLKA 315
Query: 142 FYQESGRAGRDGQIAHCILYYRLPDVF-KLSSMVFDQ--------QTGLANLYNIVSYCL 192
+YQE+GRAGRDG++AHCILYY + F ++ ++ D+ Q L +L +++ YC
Sbjct: 316 YYQETGRAGRDGKLAHCILYYSQAEYFGRMDRIIKDKDIKTDIERQWQLDDLKHVMRYCT 375
Query: 193 DQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
++ RCRR + +YF E + CR +C++CR
Sbjct: 376 NEVRCRRQQVLAYFGEEFDPAHCRQLCNNCR 406
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW + Q+ +IAFG+GIDK VRFVIH + S++ +YQ
Sbjct: 277 LWSSGEVQIIVATIAFGMGIDKAEVRFVIHFSIPGSLKAYYQ 318
>gi|255072509|ref|XP_002499929.1| predicted protein [Micromonas sp. RCC299]
gi|226515191|gb|ACO61187.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 454
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/221 (32%), Positives = 113/221 (51%), Gaps = 52/221 (23%)
Query: 54 IKPAAQKDCLDELADLMSRRFRN------QSGIIYTTSIKECEDLREELR---------N 98
+KP KD + ++ L+ +F N Q GI+Y S K+CE + E L
Sbjct: 222 VKPKT-KDIVKDMKALIHDKFTNHRNGKVQCGIVYCFSQKDCEKMAESLTCKPNDDKRWP 280
Query: 99 RGLRVSAYHAKLESN-------------------------VSIAFGLGIDKPNVRFVIHH 133
+GL YHA + ++AFG+GI+KP+VRFV HH
Sbjct: 281 KGLLALPYHAGMTDTDRKTGVPKRELHQRMWSDGKVPIICATVAFGMGINKPDVRFVFHH 340
Query: 134 CLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLA 182
+ KS+E ++QESGRAGRDG ++C L+Y+ D K+ +++ D ++ L
Sbjct: 341 SIPKSLEGYHQESGRAGRDGGKSYCTLFYQAGDAVKMRALLQDSAKETRAPPEVLRSNLE 400
Query: 183 NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +YC +QT CRR ++ +FDE + +C+GMCD+C+
Sbjct: 401 AMSYLEAYCTNQTTCRRTLLLGHFDEKFDAVKCKGMCDNCQ 441
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFV HH + KS+E ++Q
Sbjct: 321 ATVAFGMGINKPDVRFVFHHSIPKSLEGYHQ 351
>gi|88603641|ref|YP_503819.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
gi|88189103|gb|ABD42100.1| ATP-dependent DNA helicase RecQ [Methanospirillum hungatei JF-1]
Length = 606
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 83/251 (33%), Positives = 126/251 (50%), Gaps = 40/251 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSK----------SMENFYQVRIKPAAQK 60
L++ R +F V I P+VR I LS + EN +K ++
Sbjct: 160 LSIIRRTFADVPIIALTATATPSVRSDIISELSLHNPAVFVGSFNRENLIYRIVK---KE 216
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
D +L + + +N+SGI+Y S ++ DL L+ G YHA L +V
Sbjct: 217 DGEQQLVQFL-KSHQNESGIVYCFSKRQVTDLARVLQKNGFSALPYHADLPKSVRHETQD 275
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
++AFG+GI+KP+VRFV+H L K++E++YQE+GRAGRDG A C+L Y
Sbjct: 276 RFLRDEVRIIVATVAFGMGINKPDVRFVVHFDLPKNLEHYYQETGRAGRDGDPAECLLLY 335
Query: 163 RLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR 216
D K+ ++ ++Q L L+ +V YC + CRRA++ +YF E+W C
Sbjct: 336 SRGDFRKIEYLIEQMAEGTERQVSLRKLHEMVGYC-ESRACRRAVLLTYFGESWDKPSC- 393
Query: 217 GMCDHCRGGRR 227
G CD C GR+
Sbjct: 394 GNCDSCHSGRK 404
>gi|297849458|ref|XP_002892610.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
gi|297338452|gb|EFH68869.1| DNA helicase [Arabidopsis lyrata subsp. lyrata]
Length = 1189
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/202 (34%), Positives = 103/202 (50%), Gaps = 39/202 (19%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CL+++ + ++ GIIY S +CE + E L+ G + + YH +E
Sbjct: 655 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKTAFYHGSMEPEQRAFIQ 714
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 715 TQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 774
Query: 162 YRLPDVFKLSSMV----FDQ-----------------QTGLANLYNIVSYCLDQTRCRRA 200
Y D ++ M+ DQ +T NL +VSYC ++ CRR
Sbjct: 775 YGYGDYIRVKHMISQGGVDQSPMATGYNRVASLGRILETNTENLLRMVSYCENEVECRRF 834
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ +F E + T C+ CD+C
Sbjct: 835 LQLVHFGEKFDSTNCKKTCDNC 856
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 727 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 757
>gi|146165477|ref|XP_001015163.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila]
gi|146145471|gb|EAR94918.2| ATP-dependent DNA helicase, RecQ family protein [Tetrahymena
thermophila SB210]
Length = 1198
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 71/203 (34%), Positives = 109/203 (53%), Gaps = 31/203 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--Y 106
+Y V P QK ++ + + + +F QSGIIY + K+ E+L +L N +++A Y
Sbjct: 601 YYDVVRIP--QKVTIEHMVNFIKEKFNKQSGIIYCCTKKDSEELASKL-NIQYKINAAYY 657
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H + +IAFG+GIDK +VRFVIH+ SKS+EN+YQE+GR
Sbjct: 658 HGSMNDKEKEQVQQLWMSNDIQVICATIAFGMGIDKHDVRFVIHYTFSKSIENYYQEAGR 717
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC +YY D L ++ + + +A+L ++ YC D CRR
Sbjct: 718 AGRDGKISHCRIYYSPKDKNSLVFLITNNEGSNKQKKEECMAHLSKMIRYCEDTINCRRV 777
Query: 201 IIASYFDEAWSDTECRGMCDHCR 223
+ ++ E + C MCD+CR
Sbjct: 778 LQLAHLGEKFEPKFCNKMCDNCR 800
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 33/42 (78%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW ++ QV +IAFG+GIDK +VRFVIH+ SKS+EN+YQ
Sbjct: 672 LWMSNDIQVICATIAFGMGIDKHDVRFVIHYTFSKSIENYYQ 713
>gi|410080512|ref|XP_003957836.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
gi|372464423|emb|CCF58701.1| hypothetical protein KAFR_0F01050 [Kazachstania africana CBS 2517]
Length = 873
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 28/200 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V P +K ++A + F++QSGI+Y S CE + L G++ S YHA
Sbjct: 430 FYEVL--PKDKKIVTSQIASYILNDFKSQSGIVYCHSKDTCEKVSMALTQMGVKASFYHA 487
Query: 109 KL------------ESN------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +SN ++AFG+GIDK +VRFVIH+ + +S+E +YQE+GRAG
Sbjct: 488 GMTNKQRDHVQKLWQSNRYQVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQETGRAG 547
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RDG ++CI +Y DV L ++ ++ T L L ++++YC + CRR I
Sbjct: 548 RDGNFSYCITFYSFNDVRSLQKLIQTDKGLNKENKLTHLDKLQHVMAYCENTINCRRKQI 607
Query: 203 ASYFDEAWSDTECRGMCDHC 222
SYF+E + C CD+C
Sbjct: 608 LSYFNEEFDVNLCHKNCDNC 627
Score = 53.5 bits (127), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 34/42 (80%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW+++ YQV ++AFG+GIDK +VRFVIH+ + +S+E +YQ
Sbjct: 500 LWQSNRYQVICATVAFGMGIDKADVRFVIHYTVPRSLEGYYQ 541
>gi|347829887|emb|CCD45584.1| hypothetical protein [Botryotinia fuckeliana]
Length = 1775
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 28/201 (13%)
Query: 49 FYQVRIK--PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K + E+ ++S ++NQSGIIY S CE++ ++LR +G+R +
Sbjct: 1111 YYEVRRKTGKGSTAAMFSEITKMLSVDYKNQSGIIYCLSRDNCEEVAKKLREQGIRAHHF 1170
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +IAFG+GIDK NVRFVIH+CL K++E +YQE+GR
Sbjct: 1171 HAHMTPEEKKDTQHRWQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETGR 1230
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL-------ANLYNIVSYCLDQTRCRRAI 201
AGRDG+ A C LYY D M+ + G L +V +C ++ CRR
Sbjct: 1231 AGRDGKPAACFLYYGFQDSQIYKKMIEKGEGGPDVKTEQRQMLEAMVRFCDNRIDCRRVQ 1290
Query: 202 IASYFDEAWSDTECRGMCDHC 222
+ YF E + +C G CD C
Sbjct: 1291 LLRYFGETFRREDC-GNCDTC 1310
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV +IAFG+GIDK NVRFVIH+CL K++E +YQ
Sbjct: 1186 WQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQ 1226
>gi|298708608|emb|CBJ26095.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1537
Score = 127 bits (319), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 76/209 (36%), Positives = 113/209 (54%), Gaps = 40/209 (19%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL---------RNRG 100
Y++R K AA LDE+A +M + F QSGI+Y S K+CE + L +RG
Sbjct: 792 YEIRPKKAA---VLDEIAKVM-QSFPGQSGIVYCLSRKDCEKVASGLLKKLSETTGGHRG 847
Query: 101 -LRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMEN 141
RV YHA + +IAFG+GI+KP+VR+VIHH + K++ +
Sbjct: 848 RFRVDFYHADRTAAEKARVHREWSAGRIHLICATIAFGMGINKPDVRYVIHHSMPKTLTH 907
Query: 142 FYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLD 193
FYQESGRAGRDG + CI+++ D +L +MV +Q+ L +Y V +C++
Sbjct: 908 FYQESGRAGRDGLDSKCIVFFAYRDKARLENMVNRDKSLPFQRRQSNLQEVYKCVRFCIN 967
Query: 194 QTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ CRR +I +F E + C+ CD+C
Sbjct: 968 EVECRRVLILEFFGEHFPRGRCKATCDNC 996
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 33/44 (75%), Gaps = 2/44 (4%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLD 64
+IAFG+GI+KP+VR+VIHH + K++ +FYQ + A +D LD
Sbjct: 880 ATIAFGMGINKPDVRYVIHHSMPKTLTHFYQESGR--AGRDGLD 921
>gi|154324014|ref|XP_001561321.1| hypothetical protein BC1G_00406 [Botryotinia fuckeliana B05.10]
Length = 1677
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 106/201 (52%), Gaps = 28/201 (13%)
Query: 49 FYQVRIK--PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K + E+ ++S ++NQSGIIY S CE++ ++LR +G+R +
Sbjct: 1014 YYEVRRKTGKGSTAAMFSEITKMLSVDYKNQSGIIYCLSRDNCEEVAKKLREQGIRAHHF 1073
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +IAFG+GIDK NVRFVIH+CL K++E +YQE+GR
Sbjct: 1074 HAHMTPEEKKDTQHKWQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQETGR 1133
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL-------ANLYNIVSYCLDQTRCRRAI 201
AGRDG+ A C LYY D M+ + G L +V +C ++ CRR
Sbjct: 1134 AGRDGKPAACFLYYGFQDSQIYKKMIEKGEGGPDVKTEQRQMLEAMVRFCDNRIDCRRVQ 1193
Query: 202 IASYFDEAWSDTECRGMCDHC 222
+ YF E + +C G CD C
Sbjct: 1194 LLRYFGETFRREDC-GNCDTC 1213
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV +IAFG+GIDK NVRFVIH+CL K++E +YQ
Sbjct: 1089 WQIGSIQVVVATIAFGMGIDKQNVRFVIHYCLPKTLEGYYQ 1129
>gi|432332157|ref|YP_007250300.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
gi|432138866|gb|AGB03793.1| ATP-dependent DNA helicase RecQ [Methanoregula formicicum SMSP]
Length = 611
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/200 (37%), Positives = 109/200 (54%), Gaps = 28/200 (14%)
Query: 48 NFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
N +R + +K+ L LAD + + R +SGI+Y S E E + +L+ RG +AYH
Sbjct: 200 NRKNLRYRVVPKKNPLVFLADYLGQ-HREESGIVYCLSRSETETVAGDLQQRGFSAAAYH 258
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L ++AFG+GIDKP+VRFVIH+ L K++E +YQE+GRA
Sbjct: 259 AGLSRQERERVQESFIRDRVQVVCATVAFGMGIDKPDVRFVIHYDLPKTLEGYYQETGRA 318
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAII 202
GRDGQ + C+L Y D ++ S++ +G LA L ++ YC + T CRR +
Sbjct: 319 GRDGQYSECVLLYSRGDYARIRSLLEQGDSGGQHLKVSLAKLRDMQEYC-ETTGCRRKFL 377
Query: 203 ASYFDEAWSDTECRGMCDHC 222
+YF E + + C G CD C
Sbjct: 378 LTYFGEDYPEENC-GSCDTC 396
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH+ L K++E +YQ
Sbjct: 283 ATVAFGMGIDKPDVRFVIHYDLPKTLEGYYQ 313
>gi|407035712|gb|EKE37810.1| recQ family helicase, putative [Entamoeba nuttalli P19]
Length = 774
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 74/234 (31%), Positives = 123/234 (52%), Gaps = 52/234 (22%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-PAAQKDCLDELADLMSRRFRNQSGI 80
+I F ++PN+R Y+ R+K P + D + ++ NQ GI
Sbjct: 565 AIVFNQTFNRPNLR--------------YETRVKSPKVEVDIAHYI-----QQHPNQCGI 605
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
++ S K+CE L + L N G+R + YHA L++ ++AFG+GI
Sbjct: 606 VFCLSKKDCESLSKFLVNYGIRATHYHAGLDAKRRKKVQNDWMNGTFLVVCATVAFGMGI 665
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD------ 176
DKP+VRFVIH + S+E ++QE+GRAGRDG+ + CI+Y+ + D+ ++ + D
Sbjct: 666 DKPDVRFVIHQTMPSSIEQYFQEAGRAGRDGKPSDCIIYFNMKDISRVEWLKRDMGKNEL 725
Query: 177 ---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
QQ + + N+ C+ + CRR I YFDE++++ +C G CD+C ++
Sbjct: 726 TSSQQQSINAMVNL---CI-TSECRRKIQLMYFDESFNEEKCTG-CDNCERKKK 774
>gi|449015395|dbj|BAM78797.1| ATP-dependent DNA helicase RecQ [Cyanidioschyzon merolae strain 10D]
Length = 1603
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 77/204 (37%), Positives = 110/204 (53%), Gaps = 32/204 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSA--Y 106
Y+V +K K ++ +A+ + R SGIIY S +ECED+ + LR R R++A Y
Sbjct: 983 YEVYLKGPRSK-TVEWIAEFIQNEMPRGASGIIYCFSKQECEDVAKALR-RQFRIAAEHY 1040
Query: 107 HAKL--ESNV----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L ES + +IAFG+GIDKP+VRFVIH+ + K++E FYQESGR
Sbjct: 1041 HAGLTDESRIAVQQRWMRRATQVIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQESGR 1100
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN---------LYNIVSYCLDQTRCRR 199
AGRDGQ A I+ + D +L M+ GL + + ++CLD CRR
Sbjct: 1101 AGRDGQPARSIVLFSHADQRRLIGMIDKNSNGLTRAALSLQKDAVKRMAAWCLDDVSCRR 1160
Query: 200 AIIASYFDEAWSDTECRGMCDHCR 223
+ ++F E + C CD+CR
Sbjct: 1161 VTVLAHFGERFDRRACSPPCDNCR 1184
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/47 (53%), Positives = 32/47 (68%), Gaps = 3/47 (6%)
Query: 8 IAYLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
IA W QV +IAFG+GIDKP+VRFVIH+ + K++E FYQ
Sbjct: 1050 IAVQQRWMRRATQVIVATIAFGMGIDKPDVRFVIHYTMPKNVEGFYQ 1096
>gi|374385551|ref|ZP_09643054.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
gi|373225253|gb|EHP47587.1| ATP-dependent DNA helicase RecQ [Odoribacter laneus YIT 12061]
Length = 735
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 73/197 (37%), Positives = 107/197 (54%), Gaps = 30/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K KD + + ++ +SGIIY S K+ E+L E L G++ + YHA
Sbjct: 222 YYEVRPKNDPTKDIIKFI-----KKHEGKSGIIYCLSRKKVEELAEVLCINGIKAAPYHA 276
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 277 GMDATTRSANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 336
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI YY D+ KL + +Q+ G L VSY + + CRR ++ Y
Sbjct: 337 RDGGEGICITYYSYKDIQKLEKFMQGKPIAEQEIGKQLLMETVSYA-ETSLCRRKVLLHY 395
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C G CD+C
Sbjct: 396 FGEDFDEDNC-GCCDNC 411
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 301 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 330
>gi|53133486|emb|CAG32072.1| hypothetical protein RCJMB04_17c23 [Gallus gallus]
Length = 1183
Score = 127 bits (319), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
LN+ R F+ V + P V+ I + L + + + P K
Sbjct: 585 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 644
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 645 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKK 704
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+Y
Sbjct: 705 WVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFY 764
Query: 163 RLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDT 213
DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 765 SYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPN 824
Query: 214 ECRG----MCDHC 222
C+ +CD+C
Sbjct: 825 FCKDHPEVICDNC 837
>gi|164655522|ref|XP_001728890.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
gi|159102778|gb|EDP41676.1| hypothetical protein MGL_3884 [Malassezia globosa CBS 7966]
Length = 841
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/200 (35%), Positives = 109/200 (54%), Gaps = 29/200 (14%)
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN------- 113
L+ +A ++ + N+ GIIY S ++CE++ +L N+ G++ +HA L
Sbjct: 406 TLETIAAIIQKHHANECGIIYCLSRRDCENVSTDLGNKYGIQARHFHAGLNIEDKLRIQE 465
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDK +VRFVIHH + KS+E +YQE+GRAGRDG+ + CIL++
Sbjct: 466 GWEAGTFKVIVATIAFGMGIDKADVRFVIHHSMPKSLEGYYQETGRAGRDGKWSDCILFW 525
Query: 163 RLPDVFKLSSMVFDQQTGLA--------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE 214
+ D KL +M+ + A +LY + ++C T CRR I YF E +
Sbjct: 526 SMEDSRKLEAMIDESPDASAEQKRLQIKSLYQVRTFCESLTECRRTNILKYFGEKFDPKL 585
Query: 215 CRGMCDHCRGGRRDAKRVDV 234
C CD+C+ R A VD+
Sbjct: 586 CHASCDNCQ--RSPAHCVDM 603
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIHH + KS+E +YQ
Sbjct: 467 WEAGTFKVIVATIAFGMGIDKADVRFVIHHSMPKSLEGYYQ 507
>gi|307105709|gb|EFN53957.1| hypothetical protein CHLNCDRAFT_25381, partial [Chlorella
variabilis]
Length = 498
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 102/193 (52%), Gaps = 24/193 (12%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFR-NQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR KPA +K+ + E+A + + SGIIY + K+ E L +ELR G+ YH
Sbjct: 311 FYEVRQKPAKEKELVAEMAAWIQGNYPAGDSGIIYVLTRKDAESLADELRGAGVSCQGYH 370
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A +E +IAFG+GI+ P+VRFVIHH L + ESGRA
Sbjct: 371 ADMEPARRERVHLQWSQGRVQVIVATIAFGMGINNPHVRFVIHHTLRQGRPR--AESGRA 428
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
GRDG AHC LYYR D + +++V + L ++ Y T CRRA++ +F EA
Sbjct: 429 GRDGLPAHCRLYYRFGDYLRQAAVVTMESNWEPCLKGMLQYAAAPT-CRRALLCRHFGEA 487
Query: 210 WSDTECRGMCDHC 222
C GMCD C
Sbjct: 488 --PARCAGMCDRC 498
Score = 40.0 bits (92), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/35 (51%), Positives = 23/35 (65%), Gaps = 3/35 (8%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKS 45
W QV +IAFG+GI+ P+VRFVIHH L +
Sbjct: 385 WSQGRVQVIVATIAFGMGINNPHVRFVIHHTLRQG 419
>gi|56753111|gb|AAW24765.1| SJCHGC03007 protein [Schistosoma japonicum]
Length = 120
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 56/105 (53%), Positives = 77/105 (73%), Gaps = 1/105 (0%)
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQT 179
+GIDK +VRFVIH SKS+EN+YQESGRAGRD A CIL +R D+F+L+SMV ++T
Sbjct: 1 MGIDKADVRFVIHFSSSKSLENYYQESGRAGRDSNPADCILMWRFSDLFRLASMVSSERT 60
Query: 180 GLANLYNIVSYCLDQTRCRRAIIASYF-DEAWSDTECRGMCDHCR 223
G+ LY +V YC+D +CRR +I+ + D +WS +CR CD+C+
Sbjct: 61 GIVKLYKMVEYCIDSDKCRRYLISKHLGDASWSSDDCRNACDNCK 105
Score = 40.4 bits (93), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/25 (68%), Positives = 21/25 (84%)
Query: 27 LGIDKPNVRFVIHHCLSKSMENFYQ 51
+GIDK +VRFVIH SKS+EN+YQ
Sbjct: 1 MGIDKADVRFVIHFSSSKSLENYYQ 25
>gi|290490724|dbj|BAI79322.1| BLM helicase [Gallus gallus]
Length = 1380
Score = 127 bits (318), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
LN+ R F+ V + P V+ I + L + + + P K
Sbjct: 782 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 841
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 842 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKK 901
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+Y
Sbjct: 902 WVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFY 961
Query: 163 RLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDT 213
DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 962 SYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPN 1021
Query: 214 ECRG----MCDHC 222
C+ +CD+C
Sbjct: 1022 FCKDHPEVICDNC 1034
>gi|347800747|ref|NP_001007088.2| Bloom syndrome protein homolog [Gallus gallus]
Length = 1380
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 124/253 (49%), Gaps = 41/253 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
LN+ R F+ V + P V+ I + L + + + P K
Sbjct: 782 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 841
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 842 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKK 901
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+Y
Sbjct: 902 WVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFY 961
Query: 163 RLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDT 213
DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 962 SYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPN 1021
Query: 214 ECRG----MCDHC 222
C+ +CD+C
Sbjct: 1022 FCKDHPEVICDNC 1034
>gi|373957711|ref|ZP_09617671.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
gi|373894311|gb|EHQ30208.1| ATP-dependent DNA helicase RecQ [Mucilaginibacter paludis DSM
18603]
Length = 731
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR A+++ L E+ + ++ +SGIIY S K+ E++ E L G++ YHA
Sbjct: 213 FYEVR----AKRNVLKEIVRFV-KQHTGKSGIIYCLSRKKVEEVAEALSLNGVKALPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ V +IAFG+GIDKP+VR+VIHH + KSME +YQE+GRAG
Sbjct: 268 GLDAKVRADTQDRFLMEDVDVIVATIAFGMGIDKPDVRYVIHHDVPKSMEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y D+ KL + D+ + G L ++ Y + CRR I Y
Sbjct: 328 RDGGEGVCLAFYSEKDIDKLQKFMKDKPVAEREIGTQILKEVIDYA-ESAVCRRKQILHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C MCD+C ++
Sbjct: 387 FGENFNEAGCNCMCDNCSATKQ 408
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KSME +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHHDVPKSMEGYYQ 321
>gi|154150635|ref|YP_001404253.1| ATP-dependent DNA helicase RecQ [Methanoregula boonei 6A8]
gi|153999187|gb|ABS55610.1| ATP-dependent DNA helicase, RecQ family [Methanoregula boonei 6A8]
Length = 451
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 36/227 (15%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I+ LG+ KP FV C EN IK +K+ L +LAD+ R +N+SGI+Y
Sbjct: 198 ISRQLGLVKPQ-SFVGSFC----RENLEYRVIK---KKNPLVQLADICCRH-KNESGIVY 248
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDK 124
S KE E+ +L+ RG AYHA L V ++AFG+GIDK
Sbjct: 249 CLSKKETEECAADLKKRGFTALAYHAGLSRPVREAVQDAFLKNTSRIVCATVAFGMGIDK 308
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV-----FDQQT 179
P+VRFV+H+ L KS+E +YQE+GRAGRDG+ A C+L Y D ++ M+ +Q +
Sbjct: 309 PDVRFVVHYDLPKSVEGYYQETGRAGRDGKPAECVLLYSRGDAVRIRYMLDHDGAGEQAS 368
Query: 180 GLA--NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
+A L ++ YC + CRR + +YF E + C G CD C G
Sbjct: 369 RIAQKKLRDMTGYC-ETIGCRRNFLLAYFGEQPARKNC-GSCDACTG 413
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV+H+ L KS+E +YQ
Sbjct: 298 ATVAFGMGIDKPDVRFVVHYDLPKSVEGYYQ 328
>gi|219111971|ref|XP_002177737.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410622|gb|EEC50551.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 504
Score = 127 bits (318), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 116/218 (53%), Gaps = 41/218 (18%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---------NRG 100
Y+VR K L+ +AD ++ R + +SG++Y S K+CE ++L+ NR
Sbjct: 213 YEVRKKDG---QTLEVIADYIASRPK-ESGVVYCLSRKDCEKTSQKLQEIARQRPGCNR- 267
Query: 101 LRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENF 142
+R+S YHA L+ + ++AFG+GIDKP+VR+VIH+ + KS+ ++
Sbjct: 268 IRISFYHADLDPHEREQRHREWSNGGVSVLCATVAFGMGIDKPDVRYVIHYSMPKSITHY 327
Query: 143 YQESGRAGRDGQIAHCILYYRLPD-------VFKLSSMVFDQQT--GLANLYNIVSYCLD 193
YQESGRAGRDG A CILYY D + K S Q T + LY V YC D
Sbjct: 328 YQESGRAGRDGDDADCILYYHYKDKKILENLITKSSKNPHSQTTRRQIDQLYGCVQYCED 387
Query: 194 QTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKR 231
RCRR + +F E + +C CD+C+ GR +R
Sbjct: 388 LFRCRRTMQLEFFGEHFERGKCNKTCDNCKAGRTPDRR 425
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VR+VIH+ + KS+ ++YQ
Sbjct: 299 ATVAFGMGIDKPDVRYVIHYSMPKSITHYYQ 329
>gi|426200367|gb|EKV50291.1| hypothetical protein AGABI2DRAFT_64426 [Agaricus bisporus var.
bisporus H97]
Length = 648
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 115/232 (49%), Gaps = 46/232 (19%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F ++PN+++ I K+M L E+ + + + N +G+IY
Sbjct: 234 FTQSFNRPNLKYFIKAKKKKNM----------------LPEIVEFIKKEHPNHTGVIYCL 277
Query: 85 SIKECEDLREELRNRGLRVSAYHAKL---ESN---------------VSIAFGLGIDKPN 126
+ K C+ L E+L+ G+ + +HA L E N +IAFG+GIDK +
Sbjct: 278 ARKSCQLLAEQLQKEGVAANFFHAGLSKEEKNRLLESWKADKFHVMVATIAFGMGIDKAD 337
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLY- 185
VRFVIHH L KS+ +YQE+GRAGRDG++A C+LYY PD K+ M+ + L
Sbjct: 338 VRFVIHHDLPKSLSGYYQETGRAGRDGKLADCVLYYWFPDFKKICWMIDQDKEREEALTP 397
Query: 186 -----------NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
+V YC + + CRR + +F + ++ +C+ CD+C R
Sbjct: 398 EAKKRQKDAAREVVKYCTNISECRRVQVLRHFGQEFNQHDCKAGCDNCLDNR 449
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L W+ + V +IAFG+GIDK +VRFVIHH L KS+ +YQ
Sbjct: 312 LESWKADKFHVMVATIAFGMGIDKADVRFVIHHDLPKSLSGYYQ 355
>gi|390598243|gb|EIN07641.1| ATP-dependent DNA helicase [Punctularia strigosozonata HHB-11173
SS5]
Length = 521
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 109/202 (53%), Gaps = 31/202 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHA 108
Y++R K + + ++A + N+SGIIY S +CE++ +ELR N L +HA
Sbjct: 212 YEIRQKGSK---VVADIAAYIKSTHPNESGIIYCLSRNKCEEIAQELRDNYALSARHFHA 268
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VRFVIHH L KSME +YQE+GRAG
Sbjct: 269 AMSDEDKHNAQKAWQEGEGEIIVATIAFGMGIDKPDVRFVIHHHLPKSMEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAII 202
RD A C+LY+ D+ L M+ ++Q L L +V +C ++ CRR+++
Sbjct: 329 RDRLPADCVLYFTYKDIAILKKMISESEGVVEEEKQRQLDQLEEVVKFCQNKQHCRRSLM 388
Query: 203 ASYFDEA-WSDTECRGMCDHCR 223
YF + + +CR CD+CR
Sbjct: 389 LRYFGQPDFDPKDCRKFCDNCR 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/31 (74%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KSME +YQ
Sbjct: 292 ATIAFGMGIDKPDVRFVIHHHLPKSMEGYYQ 322
>gi|299473691|emb|CBN78084.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 645
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 113/206 (54%), Gaps = 33/206 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSG---IIYTTSIKECEDLREELRNRGLRVSAY 106
++V KP D ++ +AD + ++ G +++ S+ E L + LR + + Y
Sbjct: 427 FRVEEKPDKINDAMEYVADFIKKQNSKNGGRCAMVFPLSVMETSALSDFLRKKKISADYY 486
Query: 107 HA---------------KLESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + E +V +IA+G+GIDKP+VR+V+H ++KS+E +YQE+GR
Sbjct: 487 HAGQGAAERKSVQGSWQRGEISVVCATIAYGMGIDKPDVRYVVHMSIAKSVEGYYQEAGR 546
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLAN------LYNIVSYCLDQTR 196
AGRDG+ A C++ +R PDV K+ ++V ++T A L + YCL++
Sbjct: 547 AGRDGRRAECLMLFRGPDVSKMKNLVMGFGKRRARRTSAATTRQLDMLERMKDYCLEEGV 606
Query: 197 CRRAIIASYFDEAWSDTECRGMCDHC 222
CRR +A YF E + + C GMCDHC
Sbjct: 607 CRRKFLARYFGEEYKASMCNGMCDHC 632
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IA+G+GIDKP+VR+V+H ++KS+E +YQ
Sbjct: 512 ATIAYGMGIDKPDVRYVVHMSIAKSVEGYYQ 542
>gi|71021179|ref|XP_760820.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
gi|46100194|gb|EAK85427.1| hypothetical protein UM04673.1 [Ustilago maydis 521]
Length = 748
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 27/203 (13%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLRVSAY 106
Y+V +P K + + D + + SGI+Y S + + + EL + + Y
Sbjct: 352 YKVVQRPQQTKAAAEAIVDYILQNHAGHSGIVYCLSQADTQATAKALSELSSGRIATGCY 411
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L+ +IAFG+GIDKP+VRFVIH C+SKS++ +YQE+GR
Sbjct: 412 HAGLDDASKHMIHTDWRTGRIQVVCATIAFGMGIDKPDVRFVIHACISKSIDGYYQETGR 471
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDGQ + C+L+YR D ++SS+V + TG L ++ Y RCRR + A YF +
Sbjct: 472 AGRDGQDSDCVLFYRPQDAIRMSSLVAGEPTGREKLAAMLEYA-QSARCRRQLFAEYFSD 530
Query: 209 AW--SDTECR---GMCDHCRGGR 226
+ D + + G CD+C G R
Sbjct: 531 MFEKGDDQAQQVCGTCDNCTGNR 553
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WRT QV +IAFG+GIDKP+VRFVIH C+SKS++ +YQ
Sbjct: 427 WRTGRIQVVCATIAFGMGIDKPDVRFVIHACISKSIDGYYQ 467
>gi|302678065|ref|XP_003028715.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
gi|300102404|gb|EFI93812.1| hypothetical protein SCHCODRAFT_70092 [Schizophyllum commune H4-8]
Length = 788
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 105/206 (50%), Gaps = 35/206 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG---LRVSAY 106
Y V KPA+ LD + D + SGIIY S +E E + E LR + +R Y
Sbjct: 302 YAVVPKPASADALLDLMKDFILSHHPGASGIIYCRSKQEAESVAEGLRKKSEGRIRTGVY 361
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA N +IAFGLGIDK +VRFV+HH SK+++ FYQESGR
Sbjct: 362 HADKPDNEKENLHVQWRSGRIQVVCATIAFGLGIDKGDVRFVLHH--SKTLDGFYQESGR 419
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF-- 206
AGRDG+ + C+LYY+ D +L+ + G+ L +++S+ D T CR+ A YF
Sbjct: 420 AGRDGKDSDCVLYYKPQDASELAKFAATAKDGMEKLRSMLSFVQDLTTCRKVQFARYFSH 479
Query: 207 -----DEAWSDTECR-----GMCDHC 222
+ +WS E G CD+C
Sbjct: 480 SAQVSESSWSTEEADVNDPCGSCDNC 505
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR+ QV +IAFGLGIDK +VRFV+HH SK+++ FYQ
Sbjct: 377 WRSGRIQVVCATIAFGLGIDKGDVRFVLHH--SKTLDGFYQ 415
>gi|402471219|gb|EJW05076.1| RecQ family ATP-dependent DNA helicase [Edhazardia aedis USNM 41457]
Length = 1768
Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 75/228 (32%), Positives = 113/228 (49%), Gaps = 42/228 (18%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F + ++PN+ + + +SK ++ E+ +S + SGIIY
Sbjct: 1252 FAMSFNRPNLVYFVRKKMSKDVDT----------------EIVSFISTHYPESSGIIYCL 1295
Query: 85 SIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLGIDKP 125
S K+CE + E ++ GL+ YHA L N +IAFG+GIDK
Sbjct: 1296 SQKDCEMISERYNDKYGLKTRFYHAGLSKNERIETQNAWNENKFLIIVATIAFGMGIDKK 1355
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG----- 180
+VRFVIH+ L KS+E +YQE+GRAGRDG + CIL+Y D L M+ +TG
Sbjct: 1356 DVRFVIHYSLPKSLEGYYQETGRAGRDGLNSTCILFYSFKDKKILEFMIDHSKTGSNKKL 1415
Query: 181 -LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
L ++ YC + + CRR I+ + E ++ EC CD+C +R
Sbjct: 1416 QRLELQKVIDYCENTSMCRRDIVLKHLGEHFTG-ECNKTCDNCMKIKR 1462
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 22/43 (51%), Positives = 31/43 (72%), Gaps = 3/43 (6%)
Query: 12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
N W + + + +IAFG+GIDK +VRFVIH+ L KS+E +YQ
Sbjct: 1332 NAWNENKFLIIVATIAFGMGIDKKDVRFVIHYSLPKSLEGYYQ 1374
>gi|242013217|ref|XP_002427311.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
gi|212511652|gb|EEB14573.1| blooms syndrome DNA helicase, putative [Pediculus humanus corporis]
Length = 1152
Score = 126 bits (317), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 122/248 (49%), Gaps = 40/248 (16%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENFYQV--------RIKPAAQKDCLDE 65
R ++ V+I P VR ++H KS + F +K K L +
Sbjct: 558 RENYPNVNIMALTATATPRVRIDILHQLKVKSPKWFLSSFNRSNLCYAVKEKKGKSTLKD 617
Query: 66 LADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------ 113
+A L+ + F +GIIY S KECED+ +L+ G+ YHA L
Sbjct: 618 IAALIQQEFSRDTGIIYCFSRKECEDVARDLKVHGIGAIPYHAGLNDTERTKAQNLWMNG 677
Query: 114 ------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+IAFG+GIDK +VR+V H+ L KS+E +YQESGRAGRDG+ A CILYY D
Sbjct: 678 KVKVVCATIAFGMGIDKLDVRYVFHYSLPKSIEGYYQESGRAGRDGEKATCILYYSYRDK 737
Query: 168 FKLSSMV-FDQ--------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC--- 215
++ ++ DQ + + NLY +V++ + T CRR++ +YF E + C
Sbjct: 738 HRMLKLINMDQSMSNMAAKKVHIDNLYRVVAFAENVTDCRRSLQLNYFGEKFDRKVCIEN 797
Query: 216 -RGMCDHC 222
CD+C
Sbjct: 798 RETACDNC 805
>gi|405119097|gb|AFR93870.1| ATP-dependent DNA helicase hus2/rqh1 [Cryptococcus neoformans var.
grubii H99]
Length = 934
Score = 126 bits (317), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 113/212 (53%), Gaps = 32/212 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHA 108
Y+VR K ++ + E+ + + SGI+Y S CE+L ++LR + GLR YHA
Sbjct: 309 YEVRPKTSS---VIQEIVAFVRTQEARASGIVYCNSRDNCENLAKKLREDHGLRAYHYHA 365
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ +IAFG+GIDKP+VR+VIHH L +S+E +YQE+GRAG
Sbjct: 366 GMTKENRRKMQEGWQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQETGRAG 425
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGL---------ANLYNIVSYCLDQTRCRRAI 201
RDG + CILYY D K+ + DQ+ L A++ ++ YC ++ CRR+
Sbjct: 426 RDGNPSTCILYYAFKDGKKILGQI-DQEKDLTRDQKERQKASMQEVLRYCNNKVDCRRSQ 484
Query: 202 IASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
+ ++F+E + C CD C G R+ R +
Sbjct: 485 VLAFFNETFDAANCHQGCDVCLGRDRNVFRTE 516
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +++ +IAFG+GIDKP+VR+VIHH L +S+E +YQ
Sbjct: 379 WQDHKFEIMVATIAFGMGIDKPDVRYVIHHHLPRSLEGYYQ 419
>gi|19074536|ref|NP_586042.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
gi|19069178|emb|CAD25646.1| ATP-DEPENDENT DNA HELICASE [Encephalitozoon cuniculi GB-M1]
Length = 766
Score = 126 bits (316), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 113/199 (56%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K + + LD +A + F + GIIY TS KECE + E+L + + + YHA
Sbjct: 434 YEVRAKTSTVE--LD-IASFVQTHFPDCCGIIYCTSKKECEMISEKL-GKYMGTAFYHAG 489
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L N +IAFG+GIDK +VRFVIH+C+ KS+E +YQE+GRAGR
Sbjct: 490 LSKNERNSVQEKWNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 549
Query: 152 DGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + C+L+Y D K+S M+ ++Q Q +L ++ +C ++T CRR + +
Sbjct: 550 DGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDLEAVIQFCENKTDCRRMQVLA 609
Query: 205 YFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 610 HFGERFDPQMCRKTCDNCR 628
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIH+C+ KS+E +YQ
Sbjct: 502 WNRGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQ 542
>gi|396081744|gb|AFN83359.1| ATP-dependent DNA helicase [Encephalitozoon romaleae SJ-2008]
Length = 765
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 74/199 (37%), Positives = 113/199 (56%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K + + LD + + F + GIIY TS KECE + ++L+ + ++ + YHA
Sbjct: 433 YEVRAKTSTVE--LD-IVSFVQTHFPDCCGIIYCTSKKECEMISDKLK-KYMKTAFYHAG 488
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L N +IAFG+GIDK +VRFVIH+C+ KS+E +YQE+GRAGR
Sbjct: 489 LSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 548
Query: 152 DGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + C+L+Y D K+S M+ ++Q Q +L ++ +C ++T CRR +
Sbjct: 549 DGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDLEAVIQFCENKTDCRRMQVLG 608
Query: 205 YFDEAWSDTECRGMCDHCR 223
+F E + CR CD+CR
Sbjct: 609 HFGEKFDPQMCRKTCDNCR 627
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIH+C+ KS+E +YQ
Sbjct: 501 WNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQ 541
>gi|326800755|ref|YP_004318574.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
gi|326551519|gb|ADZ79904.1| ATP-dependent DNA helicase RecQ [Sphingobacterium sp. 21]
Length = 729
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 108/201 (53%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ + E+ + ++SGIIY S K+ E++ E L G+ YHA
Sbjct: 212 YYEVRPK----KNVVKEIVKFIKNN-PSKSGIIYCLSRKKVEEIAEVLNINGISALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VR+VIHH + KSME +YQE+GRAG
Sbjct: 267 GLDAKTRAETQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL+ + D+ + G L ++ Y + + CRR I Y
Sbjct: 327 RDGGEGVCIAFYSEKDIEKLTKFMKDKPVSEREIGTQILKEVIDYS-ESSVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGR 226
F E +++ C MCD+C R
Sbjct: 386 FGENFNEAGCNNMCDNCNSHR 406
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KSME +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHHDIPKSMEGYYQ 320
>gi|219853011|ref|YP_002467443.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
gi|219547270|gb|ACL17720.1| ATP-dependent DNA helicase RecQ [Methanosphaerula palustris E1-9c]
Length = 606
Score = 126 bits (316), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 71/175 (40%), Positives = 99/175 (56%), Gaps = 27/175 (15%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R +++SGIIY S KE E++ +LR RG AYHA L V
Sbjct: 224 RHQHESGIIYCMSKKETEEVARDLRRRGYNAQAYHAGLSKQVRTKVQDGFIKNTITIVCA 283
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
+IAFG+GIDKP+VRFVIH+ + K++E++YQE+GRAGRDG+ + C+L+Y D+ ++ SM+
Sbjct: 284 TIAFGMGIDKPDVRFVIHYDIPKTVESYYQETGRAGRDGRPSECVLFYSRGDIARVRSML 343
Query: 175 -FDQQT------GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
D T L L + YC + CRR + SYF E D C CD+C
Sbjct: 344 EHDHMTERNLRASLRKLQEMTEYC-EAITCRRRFLLSYFGEESPDEHCTS-CDNC 396
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 28/31 (90%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + K++E++YQ
Sbjct: 283 ATIAFGMGIDKPDVRFVIHYDIPKTVESYYQ 313
>gi|50288805|ref|XP_446832.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526141|emb|CAG59763.1| unnamed protein product [Candida glabrata]
Length = 718
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 66/181 (36%), Positives = 96/181 (53%), Gaps = 25/181 (13%)
Query: 69 LMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------------- 113
L+ F QSGIIY S CE + +EL + YHA +N
Sbjct: 315 LLKTEFHGQSGIIYCNSKASCEKVSKELNQANISSEFYHAGKTANSRLNTQRKWQQGTIQ 374
Query: 114 ---VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL 170
+IAFG+GIDK NVRFV H+ + +SME +YQE+GRAGRDG + CIL++ L DV +L
Sbjct: 375 VVCATIAFGMGIDKENVRFVFHYDIPRSMEGYYQETGRAGRDGNPSKCILFFCLQDVNRL 434
Query: 171 SSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
++ ++ L L +++ YC ++ CRR I YF+E + + C CD+C+
Sbjct: 435 QILIQRENVSALQKEHNLKKLQDVLVYCHNKVDCRRLQILEYFNEEFFPSNCMKTCDNCK 494
Query: 224 G 224
Sbjct: 495 N 495
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ QV +IAFG+GIDK NVRFV H+ + +SME +YQ
Sbjct: 368 WQQGTIQVVCATIAFGMGIDKENVRFVFHYDIPRSMEGYYQ 408
>gi|237842165|ref|XP_002370380.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|211968044|gb|EEB03240.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii ME49]
gi|221502834|gb|EEE28548.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii VEG]
Length = 1626
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 44/224 (19%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
S+ F + I++PN+ F +VR K +++ D L S RN++GII
Sbjct: 827 SVDFRMSINRPNL--------------FLEVREK--SRQTIYDIHRLLSSPALRNEAGII 870
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y SIK+CE + L + +R + YHAK+ S ++AFGLG+D
Sbjct: 871 YCLSIKDCEVVASHLISLDIRAAPYHAKMASRRRQETQAAWMAGDIAVIVSTVAFGLGVD 930
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--- 180
+P+VRFV HH + S+E +YQE GRAGRDG + CIL+Y DV ++S ++ + G
Sbjct: 931 RPDVRFVFHHSMPPSLERYYQEIGRAGRDGYASRCILFYSPGDVQRVSKLLVRPKRGSGG 990
Query: 181 -------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
L L +V +C CRR ++ FDE +T G
Sbjct: 991 ERGEKGRLGRLEKMVHFCEASVECRRQLLLHAFDEELCETAPTG 1034
>gi|178056740|ref|NP_001116556.1| Bloom syndrome protein [Sus scrofa]
gi|168084100|dbj|BAG09489.1| Bloom syndrome protein [Sus scrofa]
Length = 1426
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 106/194 (54%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
DCL+ + + + SGIIY S +EC+ + + L+ GL AYHA L +
Sbjct: 889 DCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYHAGLSDSARDEVQH 944
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+I+ C+L+
Sbjct: 945 KWINQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISQCLLF 1004
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSD 212
Y DV +L ++ ++T NLY++V YC + CRR + +YF E ++
Sbjct: 1005 YTYHDVTRLKRLILMEKDGNHHTKETHFNNLYSMVHYCENIAECRRIQLLAYFGENEFNP 1064
Query: 213 TECRG----MCDHC 222
C+ CD+C
Sbjct: 1065 NFCKKYPDVSCDNC 1078
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 957 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 987
>gi|410907219|ref|XP_003967089.1| PREDICTED: Bloom syndrome protein homolog [Takifugu rubripes]
Length = 1392
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 83/253 (32%), Positives = 127/253 (50%), Gaps = 41/253 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSME-----NFYQVRIK----PAAQKD 61
L+ R F QV + P V+ IH+ L+ + +F + +K P K
Sbjct: 790 LHELRKKFPQVPMMALTATATPRVQKDIHNQLNMNRPQVFTMSFNRTNLKYAVLPKKPKK 849
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
++ + + + SGIIY S +C+ + E L+ GL +YHA L
Sbjct: 850 VDEDCISWIKKHYPRDSGIIYCLSRNDCDAMAESLQRAGLLALSYHAGLSDGNREYVQTK 909
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+I+HCIL+Y
Sbjct: 910 WINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCILFY 969
Query: 163 RLPDVFKLSSMVF-----DQQTGLA---NLYNIVSYCLDQTRCRRAIIASYFDE-AWSDT 213
DV ++ ++ D QT NL+++V +C + CRR + +YF E ++ +
Sbjct: 970 SYADVHRIKRIISMDREGDSQTKATHYNNLHSMVHFCENSMECRRIQLLAYFGELKFNRS 1029
Query: 214 ECRG----MCDHC 222
C+ CD+C
Sbjct: 1030 FCKEHADVSCDNC 1042
>gi|223558023|gb|ACM91029.1| ATP-dependent DNA helicase RecQ [uncultured bacterium URE4]
Length = 731
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 75/197 (38%), Positives = 108/197 (54%), Gaps = 30/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +KD + R+ +SGIIY S K+ E+L + L G++ YHA
Sbjct: 213 YYEVRDKVDTEKDIIR-----FIRQNPGKSGIIYCLSRKKVEELAQLLSINGIQALPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 268 GLDAKTRAENQDRFLMEDIQVIVATIAFGMGIDKPDVRFVIHYDIPKSIEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDGQ CI YY D+ KL V +Q+ G L V+Y + ++CRR ++ +Y
Sbjct: 328 RDGQEGLCITYYSYKDIQKLEKFMQGKPVAEQEIGKQLLAETVAYA-ESSQCRRKLLLNY 386
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C G CD+C
Sbjct: 387 FGEDYPQDNC-GCCDNC 402
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHYDIPKSIEGYYQ 321
>gi|409082538|gb|EKM82896.1| hypothetical protein AGABI1DRAFT_104723 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 682
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/223 (32%), Positives = 111/223 (49%), Gaps = 37/223 (16%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F ++PN+++ I K+M L E+ + + + N +G+IY
Sbjct: 292 FTQSFNRPNLKYFIKAKKKKNM----------------LPEIVEFIKKEHPNHTGVIYCL 335
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLES---------NVSIAFGLGIDKPNVRFVIHHCL 135
+ K C+ L E+L+ GL + LES +IAFG+GIDK +VRFVIHH L
Sbjct: 336 ARKSCQLLAEQLQKEGLSKEEKNRLLESWKADKFHVMVATIAFGMGIDKADVRFVIHHDL 395
Query: 136 SKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLY---------- 185
KS+ +YQE+GRAGRDG++A C+LYY PD K+ M+ + L
Sbjct: 396 PKSLSGYYQETGRAGRDGKLADCVLYYWFPDFKKICWMIDQDKEREEALTPEAKKRQKDA 455
Query: 186 --NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
+V YC + + CRR + +F + ++ C+ CD+C R
Sbjct: 456 AREVVKYCTNISECRRVQVLRHFGQEFNQHNCKAGCDNCLDNR 498
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 30/44 (68%), Gaps = 3/44 (6%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L W+ + V +IAFG+GIDK +VRFVIHH L KS+ +YQ
Sbjct: 361 LESWKADKFHVMVATIAFGMGIDKADVRFVIHHDLPKSLSGYYQ 404
>gi|189527306|ref|XP_701357.3| PREDICTED: Bloom syndrome protein homolog, partial [Danio rerio]
Length = 1261
Score = 125 bits (314), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 72/207 (34%), Positives = 112/207 (54%), Gaps = 32/207 (15%)
Query: 48 NFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
N + + P K +E + + + SGI+Y S +C+ L + L+ G+ AYH
Sbjct: 871 NNLKYSVLPKKPKKVDEECIQWIKKYYPRDSGIVYCLSRNDCDTLADSLQRAGIAALAYH 930
Query: 108 AKLESN-------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
A L + +IAFG+GIDKP+VR+VIH L KS+E +YQESGR
Sbjct: 931 AGLSDSDREYVQNKWINQDGCQVMCATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGR 990
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQ---TGLANLYNIVSYCLDQTRCRRA 200
AGRDG+I+HC+L+Y DV ++ ++ +QQ T + NL+++V +C + CRR
Sbjct: 991 AGRDGEISHCVLFYSYSDVIRIKRLIAMDKDGNQQSKATHINNLHSMVHFCENVAECRRI 1050
Query: 201 IIASYFDEAWSDTE-CRG----MCDHC 222
+ +YF E +T C+ +CD+C
Sbjct: 1051 QLLAYFGEHTFNTSFCKEHPEVICDNC 1077
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 956 ATIAFGMGIDKPDVRYVIHASLPKSVEGYYQ 986
>gi|170102104|ref|XP_001882268.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642640|gb|EDR06895.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 570
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 81/219 (36%), Positives = 114/219 (52%), Gaps = 37/219 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECE----DLREELRNRGLRVSA 105
Y+V KPA + + D + N +GI+Y S KE E L+E +NR +R
Sbjct: 239 YKVLAKPAKSAEMYQLMVDYILEHHPNDTGIVYCFSRKESEIVAQQLKELSQNR-IRTGT 297
Query: 106 YHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESG 147
YHA + + +IAFGLGIDK +VRFVIHH SKS+E FYQESG
Sbjct: 298 YHADVAAAQKESLHKAWRNGSVRVVCATIAFGLGIDKGDVRFVIHH--SKSLEGFYQESG 355
Query: 148 RAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
RAGRDG+ + CILYYR D L SMV ++ G + + +++ + D +CR+ A+YF
Sbjct: 356 RAGRDGKDSDCILYYRPQDGTNLVSMVATERDGQSKILSMLEFAEDVEQCRKIQFATYFS 415
Query: 208 E-------AWSDTECR-----GMCDHCRGGRRDAKRVDV 234
+ +WS ++ G CD+C + R DV
Sbjct: 416 QSSNLSIASWSTSDASALQRCGHCDNCIRPQDTVHRSDV 454
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFVIHH SKS+E FYQ
Sbjct: 314 WRNGSVRVVCATIAFGLGIDKGDVRFVIHH--SKSLEGFYQ 352
>gi|221482271|gb|EEE20626.1| DEAD/DEAH box helicase, putative [Toxoplasma gondii GT1]
Length = 1625
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/224 (33%), Positives = 112/224 (50%), Gaps = 44/224 (19%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
S+ F + I++PN+ F +VR K +++ D L S RN++GII
Sbjct: 826 SVDFRMSINRPNL--------------FLEVREK--SRQTIYDIHRLLSSPALRNEAGII 869
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y SIK+CE + L + +R + YHAK+ S ++AFGLG+D
Sbjct: 870 YCLSIKDCEVVASHLISLEIRAAPYHAKMASRRRQETQAAWMAGDIAVIVSTVAFGLGVD 929
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--- 180
+P+VRFV HH + S+E +YQE GRAGRDG + CIL+Y DV ++S ++ + G
Sbjct: 930 RPDVRFVFHHSMPPSLERYYQEIGRAGRDGYASRCILFYSPGDVQRVSKLLVRPKRGSGG 989
Query: 181 -------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
L L +V +C CRR ++ FDE +T G
Sbjct: 990 ERGEKGRLGRLEKMVHFCEASVECRRQLLLHAFDEELCETAPTG 1033
>gi|358054510|dbj|GAA99436.1| hypothetical protein E5Q_06135 [Mixia osmundae IAM 14324]
Length = 1229
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 108/200 (54%), Gaps = 29/200 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+VR K K + +++DL+ R F GIIY S K+CED+ E L+ + G++ YHA
Sbjct: 698 YEVRPK---GKLIIKDISDLIKRDFAGLCGIIYCLSKKQCEDIAEALKTQHGVKAHHYHA 754
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDK NVRFV+H +S S+E +YQE+GRAG
Sbjct: 755 GMAKDDRIRIQADWQRGKIHVVCATIAFGMGIDKANVRFVLHFTISGSLEAYYQETGRAG 814
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + CILY+ D L ++ +Q A++ ++V Y + CRR +
Sbjct: 815 RDGGDSVCILYFNFNDTRLLYRLIDTGEGSHEQKQRQRAHVQDMVKYAFNTIDCRRTQVL 874
Query: 204 SYFDEAWSDTECRGMCDHCR 223
YF E ++ +C CD+CR
Sbjct: 875 QYFGETFAREQCHATCDNCR 894
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFV+H +S S+E +YQ
Sbjct: 778 ATIAFGMGIDKANVRFVLHFTISGSLEAYYQ 808
>gi|365961574|ref|YP_004943141.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
gi|365738255|gb|AEW87348.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium columnare ATCC
49512]
Length = 731
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 113/212 (53%), Gaps = 34/212 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
FY+VR K + AD++ ++ + +SG+IY S K+ E++ E L+ G+ Y
Sbjct: 212 FYEVRTKTKNVE------ADIIRFIKQHKGKSGVIYCLSRKKVEEIAEVLKVNGISAVPY 265
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 266 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGR 325
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ YY DV KL + +Q+ G A L +VSY + + RR +
Sbjct: 326 AGRDGGEGHCLAYYSYKDVEKLEKFMAGKPIAEQEVGFALLQEVVSYA-ETSMSRRKFLL 384
Query: 204 SYFDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
YF E + + G M D+ R ++ + D
Sbjct: 385 HYFGETFDNETGEGGDMDDNMRNPKKKTEAKD 416
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|17366086|sp|Q9I920.1|BLM_CHICK RecName: Full=Bloom syndrome protein homolog; AltName: Full=RecQ
helicase homolog
gi|8567899|dbj|BAA96742.1| Gd BLM [Gallus gallus]
Length = 1142
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 85/265 (32%), Positives = 129/265 (48%), Gaps = 42/265 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
LN+ R F+ V + P V+ I + L + + + P K
Sbjct: 544 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 603
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------- 113
+ + + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 604 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSNRDLVQKK 663
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +Y ESGRAGRDG+++HC+L+Y
Sbjct: 664 WVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYHESGRAGRDGEMSHCLLFY 723
Query: 163 RLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDT 213
DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 724 SYSDVTRLRRLILMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPN 783
Query: 214 ECRG----MCDHCRGGRRDAKRVDV 234
C+ +CD+C ++D K +V
Sbjct: 784 FCKDHPEVICDNC-STKKDYKSRNV 807
>gi|213408509|ref|XP_002175025.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
gi|212003072|gb|EEB08732.1| ATP-dependent DNA helicase hus2/rqh1 [Schizosaccharomyces japonicus
yFS275]
Length = 1283
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 103/195 (52%), Gaps = 28/195 (14%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLES 112
IKP +KD E+ +S +QSGIIY S CE + +LRN GL+ YHA L+
Sbjct: 682 IKP--KKDVFAEMHRFISNGRLDQSGIIYCLSRTSCEQVAAKLRNEYGLKAWHYHAGLDK 739
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+IAFG+G+DK +VR+VIHH KS+E +YQE+GRAGRDG+
Sbjct: 740 AERQRIQSSWQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFPKSLEGYYQETGRAGRDGK 799
Query: 155 IAHCILYYRLPDVFKLSSMVF----DQQTGLAN---LYNIVSYCLDQTRCRRAIIASYFD 207
AHCI++Y D ++ D +T L ++ +C +++ CRR I SYF
Sbjct: 800 PAHCIMFYSYKDSITFQKLITSGEGDAETKERQRQMLRQVIQFCENKSDCRRKQILSYFG 859
Query: 208 EAWSDTECRGMCDHC 222
E++ C CD C
Sbjct: 860 ESFDKALCNRGCDIC 874
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y+V +IAFG+G+DK +VR+VIHH KS+E +YQ
Sbjct: 749 WQAGIYKVIVATIAFGMGVDKGDVRYVIHHSFPKSLEGYYQ 789
>gi|227540043|ref|ZP_03970092.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
gi|227240118|gb|EEI90133.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33300]
Length = 729
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ + E+ + + ++GI+Y S K+ E++ E L G++ YHA
Sbjct: 212 YYEVRTK----KNVVKEIVRFI-KNNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VR+VIHH + KSME +YQE+GRAG
Sbjct: 267 GLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGVCVTFYSEKDVEKLTKFMKDKPVSEREIGTQILKEVIDYS-ESAVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + + C MCD+C+
Sbjct: 386 FGENFDEAGCNNMCDNCK 403
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KSME +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHHDIPKSMEGYYQ 320
>gi|390945503|ref|YP_006409263.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
gi|390422072|gb|AFL76578.1| ATP-dependent DNA helicase RecQ [Alistipes finegoldii DSM 17242]
Length = 730
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 32/207 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K +D + + ++ +SGIIY S K+ E+L E L G++ AYHA
Sbjct: 213 YYEIRPKHNVDRDIIRFI-----KQNEGKSGIIYCLSRKKVEELTELLVANGIKALAYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 268 GMDAATRAANQDHFLMERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+ +Y D+ KL + +Q+ G L VSY + + CRR + Y
Sbjct: 328 RDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEIGKLLLLETVSYA-ESSMCRRKTLLHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGRR--DAK 230
F E +++ C G CD+CR R DAK
Sbjct: 387 FGEEYTEENC-GNCDNCRNPRPKIDAK 412
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 283 MERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|326936299|ref|XP_003214193.1| PREDICTED: Bloom syndrome protein homolog [Meleagris gallopavo]
Length = 587
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 107/194 (55%), Gaps = 36/194 (18%)
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN------ 113
DCL+ + + + SGIIY S EC+ L+ GL AYHA L +SN
Sbjct: 51 DCLE----WIKKYHPHDSGIIYCLSRHECDTTAAMLQKEGLAALAYHAGLTDSNRDLVQK 106
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+++HC+L+
Sbjct: 107 KWVNQEGCQVICATIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLF 166
Query: 162 YRLPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSD 212
Y DV +L ++ +QT NLY++V YC + CRR + +YF E ++
Sbjct: 167 YSYSDVTRLRRLILMEKDGNSQTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNP 226
Query: 213 TECRG----MCDHC 222
C+ +CD+C
Sbjct: 227 NFCKDHPEVICDNC 240
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 119 ATIAFGMGIDKPDVRYVIHASLPKSIEGYYQ 149
>gi|300771774|ref|ZP_07081645.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
gi|300761160|gb|EFK57985.1| ATP-dependent helicase RecQ [Sphingobacterium spiritivorum ATCC
33861]
Length = 729
Score = 125 bits (313), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ + E+ + + ++GI+Y S K+ E++ E L G++ YHA
Sbjct: 212 YYEVRTK----KNVVKEIVRFI-KNNSGKTGIVYCLSRKKVEEIAEVLNINGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VR+VIHH + KSME +YQE+GRAG
Sbjct: 267 GLDAKTRADTQDKFLMEDVEVIVATIAFGMGIDKPDVRYVIHHDIPKSMEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y DV KL+ + D+ + G L ++ Y + CRR I Y
Sbjct: 327 RDGGEGVCVTFYSEKDVEKLTKFMKDKPVSEREIGTQILKEVIDYS-ESAVCRRKQILHY 385
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + + C MCD+C+
Sbjct: 386 FGENFDEAGCNNMCDNCK 403
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KSME +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHHDIPKSMEGYYQ 320
>gi|294672822|ref|YP_003573438.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473845|gb|ADE83234.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 722
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 108/198 (54%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + ++ +SGIIY S K+ E+L E LR G++ +AYH
Sbjct: 207 YYEVRPKTANVDKDIIKFI-----KQHPGKSGIIYCLSRKKVEELAEILRVNGIKAAAYH 261
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L+SN +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRA
Sbjct: 262 AGLDSNTRSNTQDEFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRA 321
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG C+ +Y D+ KL V +Q G L +Y + + CRR ++
Sbjct: 322 GRDGGEGICLAFYSYKDLQKLDKFMEGKPVAEQDIGRQLLVETAAYA-ETSVCRRKMLLH 380
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + C G CD+C
Sbjct: 381 YFGETYEKDNC-GNCDNC 397
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 287 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 316
>gi|110636721|ref|YP_676928.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
gi|110279402|gb|ABG57588.1| ATP-dependent DNA helicase RecQ [Cytophaga hutchinsonii ATCC 33406]
Length = 725
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 75/201 (37%), Positives = 109/201 (54%), Gaps = 29/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K +K +L + R + QSGIIY S K+ E++ E LR ++ YHA
Sbjct: 211 FYEVRPKGDTKK----KLIKFIKAR-KGQSGIIYCLSRKKVEEIAELLRVNDVKALPYHA 265
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE V +IAFG+GIDKP+VRFV+H+ KS+E +YQE+GRAG
Sbjct: 266 GLEPAVRMGNQDAFLNEDADVIVATIAFGMGIDKPDVRFVVHYDTPKSLEGYYQETGRAG 325
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD----QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
RDG HC+++Y + D+ KL D ++ L N +S + + CRR + YF
Sbjct: 326 RDGNEGHCLMFYSMNDIIKLEKFNKDKTVTERENARQLLNEMSSYAESSVCRRKQLLFYF 385
Query: 207 DEAWSDTECRGMCDHCRGGRR 227
E +D +C G CD+C+ +
Sbjct: 386 GENLAD-DC-GFCDNCKNKKE 404
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ KS+E +YQ
Sbjct: 290 TIAFGMGIDKPDVRFVVHYDTPKSLEGYYQ 319
>gi|334366676|ref|ZP_08515601.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
gi|313157180|gb|EFR56610.1| ATP-dependent DNA helicase RecQ family protein [Alistipes sp. HGB5]
Length = 730
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 32/207 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K +D + + ++ +SGIIY S K+ E+L E L G++ AYHA
Sbjct: 213 YYEIRPKHNVDRDIIRFI-----KQNEGKSGIIYCLSRKKVEELTELLVANGIKALAYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 268 GMDAATRAANQDHFLMERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+ +Y D+ KL + +Q+ G L VSY + + CRR + Y
Sbjct: 328 RDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEIGKLLLQETVSYA-ESSMCRRKTLLHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGRR--DAK 230
F E +++ C G CD+CR R DAK
Sbjct: 387 FGEEYTEENC-GNCDNCRNPRPKIDAK 412
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 283 MERADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|302692420|ref|XP_003035889.1| hypothetical protein SCHCODRAFT_50616 [Schizophyllum commune H4-8]
gi|300109585|gb|EFJ00987.1| hypothetical protein SCHCODRAFT_50616, partial [Schizophyllum
commune H4-8]
Length = 474
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 29/192 (15%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL--------- 110
K + +A ++ +SGIIYT S K E E+LR G+ YHA +
Sbjct: 254 KQKMSTIAKWINETHPGESGIIYTLSKKNAEVGAEQLRKEGVSAEYYHAGMTDEDRKTVY 313
Query: 111 ---ESN------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+SN +IAFG+GIDK +VRFVIHH + KS++ +YQE+GRAGRDGQ + C+L+
Sbjct: 314 MNWKSNRTQVMVATIAFGMGIDKADVRFVIHHSIPKSLDGYYQETGRAGRDGQPSDCVLH 373
Query: 162 YRLPD---VFKLSSMVFDQQTGLA--------NLYNIVSYCLDQTRCRRAIIASYFDEAW 210
Y+ D +FK+ DQ L ++ YC D ++CRR I +F E +
Sbjct: 374 YQYKDANTIFKMIREPKDQPPLPPAVVRRQEEALRAVILYCNDISQCRRVHILRFFGETF 433
Query: 211 SDTECRGMCDHC 222
C+ MCD+C
Sbjct: 434 EQKTCKKMCDNC 445
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/45 (53%), Positives = 35/45 (77%), Gaps = 4/45 (8%)
Query: 10 YLNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
Y+N W+++ QV +IAFG+GIDK +VRFVIHH + KS++ +YQ
Sbjct: 313 YMN-WKSNRTQVMVATIAFGMGIDKADVRFVIHHSIPKSLDGYYQ 356
>gi|401827051|ref|XP_003887618.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
gi|392998624|gb|AFM98637.1| ATP-dependent DNA helicase RecQ [Encephalitozoon hellem ATCC 50504]
Length = 766
Score = 124 bits (312), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/199 (36%), Positives = 113/199 (56%), Gaps = 29/199 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR K + + LD + + F + GIIY TS KECE + + L+ + ++ + YHA
Sbjct: 434 YEVRAKTSTVE--LD-IVSFVQTHFPDCCGIIYCTSKKECEMISDRLK-KYMKTAFYHAG 489
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L N +IAFG+GIDK +VRFVIH+C+ KS+E +YQE+GRAGR
Sbjct: 490 LSKNERNSVQEKWNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQETGRAGR 549
Query: 152 DGQIAHCILYYRLPDVFKLSSMV------FDQ-QTGLANLYNIVSYCLDQTRCRRAIIAS 204
DG + C+L+Y D K+S M+ ++Q Q +L ++ +C ++T CRR + +
Sbjct: 550 DGLESVCVLFYTYGDKKKISFMIEKGDGGYEQKQRQREDLEAVIQFCENKTDCRRMQVLA 609
Query: 205 YFDEAWSDTECRGMCDHCR 223
+F E + C+ CD+CR
Sbjct: 610 HFGEKFDPQMCKKTCDNCR 628
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W ++V +IAFG+GIDK +VRFVIH+C+ KS+E +YQ
Sbjct: 502 WNKGEFKVIVATIAFGMGIDKKDVRFVIHYCIPKSLEGYYQ 542
>gi|407860729|gb|EKG07462.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 102/190 (53%), Gaps = 27/190 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------- 113
+ DL+ RF +S GI+Y S K+CE++ EL G+R S YHA+
Sbjct: 452 VVDLIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEASGKNEKQERWTKDE 511
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
+IAFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG ++ CIL D
Sbjct: 512 LQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLLSECILLCSPSDKQ 571
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-------GM 218
+ M++ D +T +++LY +V+Y ++ CRR YF E + C
Sbjct: 572 RHEQMIYGSNDWKTSMSSLYRMVAYTMNDVHCRRMQQLGYFGEDMDEHYCLKQPEGSVAT 631
Query: 219 CDHCRGGRRD 228
CD+C R D
Sbjct: 632 CDNCASKRSD 641
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 507 WTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 547
>gi|404449892|ref|ZP_11014879.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
gi|403764371|gb|EJZ25272.1| ATP-dependent DNA helicase RecQ [Indibacter alkaliphilus LW1]
Length = 726
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P + + ++ + + + +SGIIY S K+ E++ L+ G++ + YHA
Sbjct: 207 YYEVR--PKVKNETKKQIIKYIKSQ-KGKSGIIYCLSRKKVEEIANLLKVNGIKAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE NV +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLEQNVRVKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++Y+ D+ KL V +++ L + +Y + + CRR + Y
Sbjct: 324 RDGLEGHCLMFYKYDDIVKLEKFNKDKPVTERENAKILLQEMAAYA-ESSICRRKFLLHY 382
Query: 206 FDEAWSDTECRGMCDHCR 223
F E D +C G CD+C+
Sbjct: 383 FGEMLED-DC-GHCDNCK 398
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|115486585|ref|NP_001068436.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|77552472|gb|ABA95269.1| ATP-dependent DNA helicase, RecQ family protein, expressed [Oryza
sativa Japonica Group]
gi|113645658|dbj|BAF28799.1| Os11g0672700 [Oryza sativa Japonica Group]
gi|125535256|gb|EAY81804.1| hypothetical protein OsI_36975 [Oryza sativa Indica Group]
gi|125568785|gb|EAZ10300.1| hypothetical protein OsJ_00135 [Oryza sativa Japonica Group]
Length = 588
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 102/185 (55%), Gaps = 27/185 (14%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKL----ESNV----- 114
+L DL+ RF N SGI+Y S EC D + LR + ++ + YHA L SNV
Sbjct: 396 QLGDLLKERFMNMSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRSNVQGKWH 455
Query: 115 ---------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQESGRAGRD AHCI+ Y+
Sbjct: 456 SGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNLPAHCIVLYQKK 515
Query: 166 DVFKLSSMVFDQ--------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
D+ ++ M+ + + + + +YC +T CRR + +F E + C+
Sbjct: 516 DLGRIVCMLRNSGNFKSESFKVAMEQAKKMQTYCELKTECRRQTLLGHFGEQYDRQRCKH 575
Query: 218 MCDHC 222
C C
Sbjct: 576 GCSPC 580
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + +V +IAFG+GIDKP+VRFVIH+ +SKS+E++YQ
Sbjct: 454 WHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQ 494
>gi|327265368|ref|XP_003217480.1| PREDICTED: Bloom syndrome protein homolog [Anolis carolinensis]
Length = 1383
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/177 (40%), Positives = 96/177 (54%), Gaps = 32/177 (18%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAF 118
SGIIY S EC+ + L+ GL AYHA L +IAF
Sbjct: 869 SGIIYCLSRYECDSMASNLQKAGLSALAYHAGLPDETRDIVQQKWINQDGCQIICATIAF 928
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKP+VRFVIH L KS+E +YQESGRAGRDG+ +HC+L+Y DV +L ++
Sbjct: 929 GMGIDKPDVRFVIHASLPKSIEGYYQESGRAGRDGERSHCLLFYSYSDVTRLRRLILMEK 988
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
+QT NLY++V YC + CRR + +YF E + + C+ CD+C
Sbjct: 989 DGNSHTRQTHFNNLYSMVHYCENVVECRRIQLLAYFGETGFNPKFCKEYPEVSCDNC 1045
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 924 ATIAFGMGIDKPDVRFVIHASLPKSIEGYYQ 954
>gi|395645903|ref|ZP_10433763.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
gi|395442643|gb|EJG07400.1| ATP-dependent DNA helicase RecQ [Methanofollis liminatans DSM 4140]
Length = 724
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIA 117
N SGIIY S K EDL E L G SAYHA L V ++A
Sbjct: 227 NDSGIIYCLSRKATEDLAETLVEHGHMASAYHAGLLPEVRKKVQEAFIKDDISIICATVA 286
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF-- 175
FG+GIDKP+VR+VIHH L KS+E +YQESGRAGRDGQ CIL Y D+ K+ ++
Sbjct: 287 FGMGIDKPDVRYVIHHDLPKSVEAYYQESGRAGRDGQPGECILLYSRGDLAKVRYLLEHD 346
Query: 176 ---DQQTGLA--NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++Q+G+A + +V YC + CRR + +YF E + C CD+C
Sbjct: 347 DQDEEQSGIAFKKMQEVVDYC-ETNSCRRKYLLAYFGEEYPGETCDA-CDNC 396
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VR+VIHH L KS+E +YQ
Sbjct: 284 TVAFGMGIDKPDVRYVIHHDLPKSVEAYYQ 313
>gi|357167600|ref|XP_003581242.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Brachypodium
distachyon]
Length = 1126
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 118/239 (49%), Gaps = 56/239 (23%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
+ F ++PN+R+++ + K+ K CL+++ + + + GIIY
Sbjct: 553 VVFRQSFNRPNLRYIV---MPKT--------------KKCLEDIDNFIRASHHKECGIIY 595
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLES---------------NV---SIAFGLGIDK 124
S +CE + +LR G + S YH ++ N+ ++AFG+GI+K
Sbjct: 596 CLSRMDCEKVAAKLREYGHKASHYHGSMDPLDRTEIQRQWSRDKINIICATVAFGMGINK 655
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----VFDQQTG 180
P+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LYY D ++ M V +Q+T
Sbjct: 656 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYNYSDYIRVKHMITQGVVEQETS 715
Query: 181 LA-----------------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ NL +VSYC + CRR + +F E + + C CD+C
Sbjct: 716 MPRGGSLSSHRQALETHKENLLCMVSYCENDVDCRRLLQLIHFGETFDPSCCAKTCDNC 774
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 645 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 675
>gi|145478455|ref|XP_001425250.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392319|emb|CAK57852.1| unnamed protein product [Paramecium tetraurelia]
Length = 667
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 112/213 (52%), Gaps = 29/213 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
Y+V+++ ++ + E+ + ++ + QSGIIY + EC+ L + L G+ YHA
Sbjct: 60 IYEVKLREEFKR-TVQEIKEFINLTYPKQSGIIYCLTQSECQTLSQSLIQHGIGSDFYHA 118
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L N ++AFG+GIDK + RFVIH + KS+EN+YQESGRAG
Sbjct: 119 GLTENERHRIHKNWLMNEVQVIVATVAFGMGIDKKDCRFVIHFQMPKSIENYYQESGRAG 178
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANL---YNI------VSYCLDQTRCRRAI 201
RDG+ AHC+L+Y D +K + + D T + YN+ +C D+ +CRR +
Sbjct: 179 RDGKQAHCLLFYNNSD-YKTNLCLMDLNTEMTTPMKKYNVKKLDQMQQFCYDRVQCRRVL 237
Query: 202 IASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
SY E + T C CD+C +++D+
Sbjct: 238 QLSYLGENFDKTLCNKKCDNCLRDDEMTEKIDL 270
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + QV ++AFG+GIDK + RFVIH + KS+EN+YQ
Sbjct: 132 WLMNEVQVIVATVAFGMGIDKKDCRFVIHFQMPKSIENYYQ 172
>gi|390336039|ref|XP_780247.3| PREDICTED: Bloom syndrome protein homolog, partial
[Strongylocentrotus purpuratus]
Length = 634
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 100/177 (56%), Gaps = 33/177 (18%)
Query: 88 ECEDLREELRNRGLRVSAYHA----KLESNV--------------SIAFGLGIDKPNVRF 129
ECE + ++L N G++ S YHA K S V +IAFG+GIDK +VRF
Sbjct: 60 ECEKVADDLSNAGIKASPYHAGQSDKERSTVQTRWINGQYKVVCATIAFGMGIDKADVRF 119
Query: 130 VIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-------QTGLA 182
VIH+ + KS+E +YQE+GRAGRDG +AHC+LY+ DV +L M+ + +
Sbjct: 120 VIHYSMPKSIEGYYQEAGRAGRDGGLAHCVLYFSYQDVTRLRRMIEKNGDNYNATKVHVD 179
Query: 183 NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CR----GMCDHCRGGRRDAKRVDV 234
NLY +V YC ++ CRR I+ SYF E D CR CD+C+ DA VDV
Sbjct: 180 NLYGMVQYCDNKADCRRVIMLSYFGETGYDRAICRRRRETACDNCQS---DALFVDV 233
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Y+V +IAFG+GIDK +VRFVIH+ + KS+E +YQ
Sbjct: 94 WINGQYKVVCATIAFGMGIDKADVRFVIHYSMPKSIEGYYQ 134
>gi|406659948|ref|ZP_11068084.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
gi|405556351|gb|EKB51290.1| ATP-dependent DNA helicase recQ [Cecembia lonarensis LW9]
Length = 726
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 70/200 (35%), Positives = 112/200 (56%), Gaps = 33/200 (16%)
Query: 49 FYQVR--IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR IK +K + + + + +SGIIY S K+ E++ + L+ G++ + Y
Sbjct: 207 YYEVRPKIKNETKKQIIKYI-----KSHKGKSGIIYCLSRKKVEEIADLLKVNGIKAAPY 261
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L+ +V +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GR
Sbjct: 262 HAGLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGR 321
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+++YR D+ KL V +++ L + +Y + + CRR +
Sbjct: 322 AGRDGLEGHCLMFYRYEDIIKLEKFNKDKPVTERENAKVLLQEMAAYA-ESSICRRKFLL 380
Query: 204 SYFDEAWSDTECRGMCDHCR 223
YF E D +C G CD+C+
Sbjct: 381 HYFGELLED-DC-GFCDNCK 398
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|224025973|ref|ZP_03644339.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
gi|224019209|gb|EEF77207.1| hypothetical protein BACCOPRO_02724 [Bacteroides coprophilus DSM
18228]
Length = 727
Score = 124 bits (311), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 31/209 (14%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A +D + + R+ +SGIIY S K+ E+L E L+ G++ YH
Sbjct: 211 YYEVRAKTANVDRDIIKFI-----RQNEEKSGIIYCLSRKKVEELAEVLQANGIKARPYH 265
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRA
Sbjct: 266 AGMDSATRSANQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRA 325
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR I+
Sbjct: 326 GRDGGEGQCITFYSNKDLQKLEKFMQGKPVSEQEIGKQLLLETAAYA-ESSVCRRKILLH 384
Query: 205 YFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
YF E +++ C G CD+C ++ + D
Sbjct: 385 YFGEEYTEDNC-GNCDNCLNPKKQVEAQD 412
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDVPKSLEGYYQ 320
>gi|325280334|ref|YP_004252876.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
gi|324312143|gb|ADY32696.1| ATP-dependent DNA helicase RecQ [Odoribacter splanchnicus DSM
20712]
Length = 727
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K Q D ++ + + +SGIIY S K+ E+L E L G++ + YHA
Sbjct: 211 YYEVRPK---QGDVTKDIIKFI-KNHEGKSGIIYCLSRKKVEELAEVLSINGIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++++ +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDASTRSTNQDRFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ YY D+ KL + +Q+ G L V+Y + + CRR ++ Y
Sbjct: 327 RDGGEGICLTYYSFKDIQKLEKFMQGKPIAEQEIGKQLLMETVAYA-ETSLCRRKVLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C G CD+C
Sbjct: 386 FGETYEEDNC-GCCDNC 401
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|291514588|emb|CBK63798.1| ATP-dependent DNA helicase RecQ [Alistipes shahii WAL 8301]
Length = 730
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 110/201 (54%), Gaps = 30/201 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K D + + ++ +SGIIY S K+ E+L E L G+R AYHA
Sbjct: 213 YYEIRPKHNVDHDIIRFI-----KQNEGKSGIIYCLSRKKVEELTELLVANGIRALAYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++++ +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 268 GMDASTRAANQDDFLMERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+ +Y D+ KL + +Q+ G L VSY + + CRR + Y
Sbjct: 328 RDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEIGKLLLLETVSYA-ESSMCRRKTLLHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGR 226
F E +++ C G CD+CR +
Sbjct: 387 FGEDYTEDNC-GNCDNCRNPK 406
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 283 MERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|395324100|gb|EJF56547.1| ATP-dependent DNA helicase [Dichomitus squalens LYAD-421 SS1]
Length = 817
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 112/207 (54%), Gaps = 37/207 (17%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL---RNRGLRVSAY 106
Y V KP++ ++++ D + RN +GI+Y + K+CE + E+L + +R Y
Sbjct: 322 YAVLPKPSSGTGSIEKMRDYILTHHRNDTGIVYCLTRKDCESVAEDLMRLSDGAIRTGVY 381
Query: 107 HAKL-------------ESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + E V +IAFGLGIDK +VRFV+HH SKS++ FYQESGR
Sbjct: 382 HADVADAKKEALHRQWREGKVKVVCATIAFGLGIDKGDVRFVVHH--SKSLDGFYQESGR 439
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF-- 206
AGRDG+ A C+LYYR D +++S+ +++ G ++++ D CR+ A YF
Sbjct: 440 AGRDGKDADCVLYYRTQDAMRIASLTCNERGGQDKALAMLAFASDLEECRKIQFAQYFNK 499
Query: 207 -----------DEAWSDTECRGMCDHC 222
+E ++T C G CD+C
Sbjct: 500 SSKMSLSFFRTEEEDANTRC-GHCDNC 525
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH SKS++ FYQ
Sbjct: 397 WREGKVKVVCATIAFGLGIDKGDVRFVVHH--SKSLDGFYQ 435
>gi|431920255|gb|ELK18290.1| Bloom syndrome protein [Pteropus alecto]
Length = 1272
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 120/231 (51%), Gaps = 42/231 (18%)
Query: 34 VRFVIH--HCLSKSMENFYQ--VRIKPAAQK-DCLDELADLMSRRFRNQSGI-----IYT 83
RFVI HC+S+ +F Q R+ QK + +A + R Q I I
Sbjct: 798 ARFVIDEAHCVSQWGHDFRQDYKRMNMLRQKFPSVPVMALTATANLRVQKDILTQLKILR 857
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------SIAFGLGIDK 124
++EC+ + + L+ GL AYHA L + ++AFG+GIDK
Sbjct: 858 PQVRECDTMADTLQKNGLAALAYHAGLSDSARDEVQHKWINQDGCQVICATVAFGMGIDK 917
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--------D 176
P+VRFVIH L KS+E +YQESGRAGRDG+++HC+L+Y DV +L ++
Sbjct: 918 PDVRFVIHASLPKSVEGYYQESGRAGRDGEVSHCLLFYTYYDVTRLKRLILMEKDGNHHT 977
Query: 177 QQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
++T NLY++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 978 KETHFNNLYSMVHYCENITECRRIQLLAYFGEIGFNPDFCKKYPDVSCDNC 1028
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 907 ATVAFGMGIDKPDVRFVIHASLPKSVEGYYQ 937
>gi|123494887|ref|XP_001326616.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
gi|121909533|gb|EAY14393.1| ATP-dependent DNA helicase, RecQ family protein [Trichomonas
vaginalis G3]
Length = 1447
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 64/205 (31%), Positives = 110/205 (53%), Gaps = 32/205 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+V K KD + + + + + N +GII+ + E +L + + +G + YH
Sbjct: 560 FYEVIQKEENSKD--EMIRWIKAHGYENSTGIIFCMTTPETVNLSQYMNTKGFNTAYYHG 617
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
K+E+ ++AFG+GIDKP+VR+VIH + +S+E +YQESGRAG
Sbjct: 618 KMENADRKKVQEMWMNNQIRVIVATLAFGMGIDKPDVRYVIHMTMPRSLEAYYQESGRAG 677
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV--FDQQTGLAN----------LYNIVSYCLDQTRCR 198
RDG+ +HC+L++ + D ++ ++ + + + N L ++ Y LD+T CR
Sbjct: 678 RDGKQSHCLLFFSMGDKARVHRLISYTESEEQIKNKDRLEVEENLLEHMAEYGLDKTTCR 737
Query: 199 RAIIASYFDEAWSDTECRGMCDHCR 223
R ++ SYF E + C CD+C+
Sbjct: 738 RVLLLSYFGEQFDPDNCGMTCDNCQ 762
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 17/113 (15%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKP---AAQKDCLDELADLMSRRFRNQS 78
++AFG+GIDKP+VR+VIH + +S+E +YQ + Q CL L M + R
Sbjct: 642 TLAFGMGIDKPDVRYVIHMTMPRSLEAYYQESGRAGRDGKQSHCL--LFFSMGDKARVHR 699
Query: 79 GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVI 131
I YT S E+++N+ R+ LE G+DK R V+
Sbjct: 700 LISYTES-------EEQIKNKD-RLEVEENLLEHMAE----YGLDKTTCRRVL 740
>gi|404406052|ref|ZP_10997636.1| ATP-dependent DNA helicase RecQ [Alistipes sp. JC136]
Length = 730
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 32/207 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K +D + + ++ +SGIIY S K+ E+L E L G+R AYHA
Sbjct: 213 YYEIRPKRNVDRDIIRFI-----KQNEGKSGIIYCLSRKKVEELTELLVANGIRALAYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 268 GMDAVTRAANQDDFLMERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+ +Y D+ KL + +Q+ G L VSY + + CRR + Y
Sbjct: 328 RDGGEGYCLTFYSYKDIQKLEKFMQGKPIAEQEIGKLLLLETVSYA-ESSMCRRKTLLHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGRR--DAK 230
F E +++ C G CD+CR + DAK
Sbjct: 387 FGEDYTEDNC-GNCDNCRNPKPKVDAK 412
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 283 MERVEVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|443900420|dbj|GAC77746.1| ATP-dependent DNA helicase [Pseudozyma antarctica T-34]
Length = 800
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 27/206 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLRVSA 105
Y+V +P + + D + GI+Y S + E + + EL +R +
Sbjct: 355 LYRVVQRPQQAQAASQAIVDYILAHHAGHCGIVYCLSQSDTEAMAKALMELSSRRIATGT 414
Query: 106 YHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESG 147
YHA L+ +IAFG+GIDKP+VRFVIH C+SKS++ +YQE+G
Sbjct: 415 YHAGLDDASKQRIHTDWRKGRIQVVCATIAFGMGIDKPDVRFVIHACISKSLDAYYQETG 474
Query: 148 RAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
RAGRDG+ + C+L+YR D ++SS+V + TG L ++ Y RCRR + A YF
Sbjct: 475 RAGRDGKTSDCLLFYRPQDAIRMSSLVASEPTGQEKLSAMLEYA-QSARCRRQLFADYFS 533
Query: 208 EAWSDTECR-----GMCDHCRGGRRD 228
+ + + + +CD+C R+D
Sbjct: 534 DMFEKGDAQRQRSCAICDNCTEHRQD 559
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV +IAFG+GIDKP+VRFVIH C+SKS++ +YQ
Sbjct: 431 WRKGRIQVVCATIAFGMGIDKPDVRFVIHACISKSLDAYYQ 471
>gi|384487467|gb|EIE79647.1| hypothetical protein RO3G_04352 [Rhizopus delemar RA 99-880]
Length = 692
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 75/204 (36%), Positives = 107/204 (52%), Gaps = 39/204 (19%)
Query: 57 AAQKDCL---------DELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNR-GLRVS 104
A QKD + + LAD+ ++ +SGIIY S K+CE + E LR G+
Sbjct: 338 AVQKDVIHNLKRKGKRNHLADINEFIKQHYTESGIIYCISRKDCEQVAEALRTTYGVSTK 397
Query: 105 AYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YH K+ S+ +IAFG+GIDKP+VR+V+H + S+E +YQE+
Sbjct: 398 HYHGKMTSSERSEVQSEWQTGKIRVIVATIAFGMGIDKPDVRYVVHFSMPSSLEGYYQET 457
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL--------ANLYNIVSYCLDQTRCR 198
GRAGRDG A C LYY D+ + + + DQ G NL ++ YC ++ CR
Sbjct: 458 GRAGRDGLPAICRLYYSFSDM-RTHNFLIDQGEGSWQQKQRQRDNLNTMMRYCDNKADCR 516
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R I SYF E ++ C+ MCD+C
Sbjct: 517 RKQILSYFGERFNPAHCQKMCDNC 540
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T +V +IAFG+GIDKP+VR+V+H + S+E +YQ
Sbjct: 415 WQTGKIRVIVATIAFGMGIDKPDVRYVVHFSMPSSLEGYYQ 455
>gi|261330758|emb|CBH13743.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei gambiense DAL972]
Length = 1548
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 26/183 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN---------- 113
+A+++ + F +S GI+Y S K+CE++ LR G+R S YHA E N
Sbjct: 675 VAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADASEKNEKQEQWTRDE 734
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
++AFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG + C L + D
Sbjct: 735 LQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFAAGDRQ 794
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG------MC 219
+ M+ D QT + +L ++V Y L+ CRR SYF E SD C +C
Sbjct: 795 RHEQMICGSKDSQTSMLSLCHMVGYTLNDVHCRRMQQLSYFGEHVSDHFCLTAPGDVEIC 854
Query: 220 DHC 222
D+C
Sbjct: 855 DNC 857
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV ++AFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 730 WTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQ 770
>gi|72393397|ref|XP_847499.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma brucei TREU927]
gi|62359597|gb|AAX80030.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei]
gi|70803529|gb|AAZ13433.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
brucei brucei strain 927/4 GUTat10.1]
Length = 1548
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 71/183 (38%), Positives = 101/183 (55%), Gaps = 26/183 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN---------- 113
+A+++ + F +S GI+Y S K+CE++ LR G+R S YHA E N
Sbjct: 675 VAEIIKKNFPPRSCGIVYCISKKDCEEMAAVLRKEGIRASYYHADASEKNEKQEQWTRDE 734
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
++AFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG + C L + D
Sbjct: 735 LQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLSSKCFLLFAAGDRQ 794
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG------MC 219
+ M+ D QT + +L ++V Y L+ CRR SYF E SD C +C
Sbjct: 795 RHEQMICGSKDSQTSMLSLCHMVGYTLNDVHCRRMQQLSYFGEHVSDHFCLTAPGDVEIC 854
Query: 220 DHC 222
D+C
Sbjct: 855 DNC 857
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/41 (51%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV ++AFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 730 WTRDELQVLCATVAFGMGINKPDVRFVIHAAMPKSIEGYYQ 770
>gi|449543657|gb|EMD34632.1| hypothetical protein CERSUDRAFT_116806 [Ceriporiopsis subvermispora
B]
Length = 806
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 78/209 (37%), Positives = 106/209 (50%), Gaps = 31/209 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---NRGLRVSAY 106
Y V KP+ + + D + RN +GIIY S KE E + E+L + ++ Y
Sbjct: 357 YTVFPKPSDTGQVIQVMKDYILEHHRNHTGIIYCLSRKEAETVAEKLEALSDGMIKTGYY 416
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L +IAFGLGIDK VRFV+HH +SKS+++FYQESGR
Sbjct: 417 HADLAPERRAQLHRQWRAGTVQVVCATIAFGLGIDKKEVRFVLHHSISKSLDHFYQESGR 476
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF-- 206
AGRDG+ A C+LYYR D+ +L SM ++ + A L +V + D CR+ A YF
Sbjct: 477 AGRDGKDADCVLYYRPQDLNRLLSMTWNDRVP-AKLLAMVRFAQDIEECRKIQFAKYFSA 535
Query: 207 -----DEAWSDTECR--GMCDHCRGGRRD 228
+W+ E C HC RRD
Sbjct: 536 SSNLSMSSWTTEEADVLAPCGHCDNCRRD 564
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR QV +IAFGLGIDK VRFV+HH +SKS+++FYQ
Sbjct: 432 WRAGTVQVVCATIAFGLGIDKKEVRFVLHHSISKSLDHFYQ 472
>gi|402220569|gb|EJU00640.1| ATP-dependent DNA helicase [Dacryopinax sp. DJM-731 SS1]
Length = 725
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 34/219 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR--NRG-LRVSAY 106
Y V KP + + +AD + R +SGI+Y S K+ + + + + ++G +R Y
Sbjct: 238 YSVLPKPPSAAGAIQAMADYILAHHRGESGIVYCLSKKDTQTVADGIAQASKGKIRTGVY 297
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA +E +IAFGLGIDK +VRFV+HH +SKS++ FYQESGR
Sbjct: 298 HADVEDAEKEGIHRRWRTGQVQVVCATIAFGLGIDKGDVRFVLHHSMSKSLDGFYQESGR 357
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD- 207
AGRDG+ A C+LYYR D +LSS++ + G ++ + + T CR+ + A YF
Sbjct: 358 AGRDGKHADCVLYYRGQDATRLSSLICGEVEGQEKCMFMLRFAQNLTDCRKLLFARYFSA 417
Query: 208 ------EAWSDTECR------GMCDHCRGGRRDAKRVDV 234
AW D G CD+C R DV
Sbjct: 418 SSELATAAWEDPSAPASLAPCGHCDNCLRPPSTVSRKDV 456
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/41 (63%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WRT QV +IAFGLGIDK +VRFV+HH +SKS++ FYQ
Sbjct: 313 WRTGQVQVVCATIAFGLGIDKGDVRFVLHHSMSKSLDGFYQ 353
>gi|147919945|ref|YP_686301.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
gi|110621697|emb|CAJ36975.1| ATP-dependent DNA helicase [Methanocella arvoryzae MRE50]
Length = 605
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 125/249 (50%), Gaps = 45/249 (18%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLS-----KSMENF------YQVRIKPAAQ 59
L+L ++ F +V + P VR I L K + +F Y+VR K A
Sbjct: 162 LSLLKSKFPKVPMIALTASAIPEVREDIASQLKLVSPKKYLGSFNRINLRYEVREKKDAT 221
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV----- 114
L +A R R +SGI+Y + K E+L E+LR G++ YHA L V
Sbjct: 222 AQILSYIA-----RNRGKSGIVYCLARKTTEELAEKLRRAGIKALPYHADLPDTVRSATQ 276
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GIDKP+VR+VIH+ + K++E +YQE+GRAGRDG+ + CI++
Sbjct: 277 EKFVRDDVEVVCATVAFGMGIDKPDVRYVIHYDMPKNLEAYYQETGRAGRDGEASDCIMF 336
Query: 162 YRLPDVFKLSSMVFDQQT-------GLANLYNIVSYCLDQTR-CRRAIIASYFDEAWSDT 213
Y D K+ ++ + T + + +C +TR CRR + SYF E + D
Sbjct: 337 YSPADALKMRGLLEKEYTDYHLSRVAMKKWQAMRDFC--ETRLCRRKYLLSYFGEEYDDP 394
Query: 214 ECRGMCDHC 222
C G CD+C
Sbjct: 395 ACDG-CDNC 402
>gi|71406960|ref|XP_805980.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70869587|gb|EAN84129.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1451
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 102/190 (53%), Gaps = 27/190 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------- 113
+ DL+ RF +S GI+Y S K+CE++ EL G+R S YHA+
Sbjct: 597 VVDLIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEASGKNEKQERWTKDE 656
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
+IAFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG ++ CIL D
Sbjct: 657 LQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLLSECILLCSPSDKQ 716
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-------GM 218
+ M++ D +T +++LY +++Y ++ CRR YF E + C
Sbjct: 717 RHEQMIYGSNDWKTSMSSLYRMLAYTMNDVHCRRMQQLGYFGEDMDEHYCLKQPEGSVAT 776
Query: 219 CDHCRGGRRD 228
CD+C R D
Sbjct: 777 CDNCASKRSD 786
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 652 WTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 692
>gi|1931649|gb|AAB65484.1| DNA helicase isolog; 74946-78841 [Arabidopsis thaliana]
Length = 665
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 39/202 (19%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CL+++ + ++ GIIY S +CE + E L+ G + + YH +E
Sbjct: 328 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQ 387
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 388 TQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 447
Query: 162 YRLPDVFKLSSMV----FDQ-----------------QTGLANLYNIVSYCLDQTRCRRA 200
Y D ++ M+ DQ +T NL +V YC ++ CRR
Sbjct: 448 YGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRF 507
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ + E + T C+ CD+C
Sbjct: 508 LQLVHLGEKFDSTNCKKTCDNC 529
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 401 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 430
>gi|302772997|ref|XP_002969916.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
gi|300162427|gb|EFJ29040.1| hypothetical protein SELMODRAFT_10140 [Selaginella moellendorffii]
Length = 703
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 114/238 (47%), Gaps = 55/238 (23%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + P +K +E+ + + ++SGIIY
Sbjct: 220 IIFRQTFNRPNLRY----------------SVVPKTKK-VYEEIDAFIKENYPHESGIIY 262
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + E+LR G ++ YHA ++ ++AFG+GI+K
Sbjct: 263 CFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQRMWSKDEINIICATVAFGMGINK 322
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK----LSSMVFDQ--- 177
P+VRFVIHH + KS+E ++QESGRAGRD A CILYY D + LS DQ
Sbjct: 323 PDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYYSYSDYVRVKHLLSQGAVDQTST 382
Query: 178 -------------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+T NL + +YC ++ CRR++ +F E + C+ CD+C
Sbjct: 383 GRSWNNSDTANQLKTNFDNLQRMGAYCENEVDCRRSLQLGHFGEKFDSASCKSTCDNC 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH + KS+E ++Q
Sbjct: 313 TVAFGMGINKPDVRFVIHHSIPKSIEGYHQ 342
>gi|30681987|ref|NP_172562.2| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
gi|75329797|sp|Q8L840.1|RQL4A_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4A; AltName:
Full=RecQ-like protein 4A; Short=AtRecQ4A;
Short=AtRecQl4A; AltName: Full=SGS1-like protein;
Short=AtSGS1
gi|21539533|gb|AAM53319.1| DNA helicase isolog [Arabidopsis thaliana]
gi|33589672|gb|AAQ22602.1| At1g10930 [Arabidopsis thaliana]
gi|332190544|gb|AEE28665.1| ATP-dependent DNA helicase Q-like 4A [Arabidopsis thaliana]
Length = 1188
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 39/202 (19%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CL+++ + ++ GIIY S +CE + E L+ G + + YH +E
Sbjct: 657 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQ 716
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 717 TQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 776
Query: 162 YRLPDVFKLSSMV----FDQ-----------------QTGLANLYNIVSYCLDQTRCRRA 200
Y D ++ M+ DQ +T NL +V YC ++ CRR
Sbjct: 777 YGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRF 836
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ + E + T C+ CD+C
Sbjct: 837 LQLVHLGEKFDSTNCKKTCDNC 858
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 729 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 759
>gi|11121449|emb|CAC14868.1| DNA Helicase [Arabidopsis thaliana]
Length = 1182
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 67/202 (33%), Positives = 101/202 (50%), Gaps = 39/202 (19%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CL+++ + ++ GIIY S +CE + E L+ G + + YH +E
Sbjct: 651 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSMEPEQRAFIQ 710
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 711 TQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 770
Query: 162 YRLPDVFKLSSMV----FDQ-----------------QTGLANLYNIVSYCLDQTRCRRA 200
Y D ++ M+ DQ +T NL +V YC ++ CRR
Sbjct: 771 YGYGDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCENEVECRRF 830
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ + E + T C+ CD+C
Sbjct: 831 LQLVHLGEKFDSTNCKKTCDNC 852
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 723 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 753
>gi|198276172|ref|ZP_03208703.1| hypothetical protein BACPLE_02361 [Bacteroides plebeius DSM 17135]
gi|198270984|gb|EDY95254.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 727
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 75/209 (35%), Positives = 112/209 (53%), Gaps = 31/209 (14%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + ++ +SGIIY S K+ E+L E L G++ AYH
Sbjct: 211 YYEVRAKSANVDKDIIKFI-----KQNEGKSGIIYCLSRKKVEELTEILLANGIKARAYH 265
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRA
Sbjct: 266 AGMDSATRNGNQDAFLKEDIDVIVATIAFGMGIDKPDVRFVIHYDVPKSLEGYYQETGRA 325
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL + +Q+ G L +Y + + CRR I+
Sbjct: 326 GRDGGEGQCITFYSNKDLQKLEKFMQGKPISEQEIGRQLLQETAAYA-ESSVCRRKILLH 384
Query: 205 YFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
YF E +++ C G CD+C ++ + D
Sbjct: 385 YFGEEYTEDNC-GNCDNCLNPKKQVEAQD 412
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDVPKSLEGYYQ 320
>gi|384253210|gb|EIE26685.1| ATP-dependent DNA helicase, partial [Coccomyxa subellipsoidea
C-169]
Length = 513
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 38/208 (18%)
Query: 61 DCLDELADLMSRRF----RNQSGIIYTTSIKECEDLREELR--NRGLRVSAYHAKLESN- 113
D + E+ D ++R F R Q GI+Y S +CE + EL+ +RG V YHA L
Sbjct: 215 DAIKEMEDRIARNFCHHGRVQCGIVYCLSRNDCEKVAAELQEYSRGC-VFHYHAALTQQE 273
Query: 114 -----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIA 156
+IAFG+GI+KP+VRFV+H + KS+E ++QE+GR GRDG++A
Sbjct: 274 REEVQANWTHDRMQIIVATIAFGMGINKPDVRFVMHFSVPKSLEGYHQETGRGGRDGKVA 333
Query: 157 HCILYYRLPDVFKLSSMVF----DQQTGLANLY-------NIVSYCLDQTRCRRAIIASY 205
CILYY D ++ M+ +Q T A L ++++YC +Q CRR+++ ++
Sbjct: 334 TCILYYSYADAVRMRHMLKQSAEEQNTSPAQLQCNMDSLNHMIAYCEEQVECRRSVLLAH 393
Query: 206 FDEAWSDTECRGMCDHC--RGGRRDAKR 231
F E++ C G CD C R G+ +R
Sbjct: 394 FGESFDVKRCHGTCDVCASRNGQEFEQR 421
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 27/37 (72%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GI+KP+VRFV+H + KS+E ++Q
Sbjct: 285 RMQIIVATIAFGMGINKPDVRFVMHFSVPKSLEGYHQ 321
>gi|324502420|gb|ADY41066.1| Bloom syndrome protein [Ascaris suum]
Length = 1090
Score = 123 bits (309), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 97/191 (50%), Gaps = 25/191 (13%)
Query: 57 AAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--- 113
A + L + + M + +SGI+Y S KECE + + L+N+G+ YHA L
Sbjct: 520 AKRPKSLSAVMERMKALYPGKSGIVYCLSRKECETVSKSLQNQGISADVYHAGLPDKQRQ 579
Query: 114 ---------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC 158
+IAFG+GIDKP+VRFVIH + KS+E +YQE+GRAGRDG ++C
Sbjct: 580 NVQAKWINNHINVICATIAFGMGIDKPDVRFVIHFSMPKSIEGYYQETGRAGRDGLTSYC 639
Query: 159 ILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
L Y D + M+ + L NL +V+YC + + CRR ++ +F E +
Sbjct: 640 ALLYCYNDSIRARKMIEGDNSTVGVRSMHLNNLMQVVAYCENVSVCRRKVLVEHFGEVYD 699
Query: 212 DTECRGMCDHC 222
CR C
Sbjct: 700 AEACRTSATPC 710
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + KS+E +YQ
Sbjct: 595 ATIAFGMGIDKPDVRFVIHFSMPKSIEGYYQ 625
>gi|134111480|ref|XP_775656.1| hypothetical protein CNBD6100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258318|gb|EAL21009.1| hypothetical protein CNBD6100 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 893
Score = 123 bits (308), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 62/178 (34%), Positives = 98/178 (55%), Gaps = 21/178 (11%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---NRGLRVSAY 106
Y+V K + K + E+ + + +SGI+Y S K+ E + EEL+ N ++ Y
Sbjct: 356 YKVLPKASNAKTAIAEMGRWIQDKHPGESGIVYCLSKKDAETVAEELKGWSNGSIKTGVY 415
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA ++ +IAFGLGIDK +VR+VIHH +SKS+E +YQE+GR
Sbjct: 416 HAGIDDTEKETIHVKWREGKINCICATIAFGLGIDKGDVRYVIHHSMSKSLEGYYQETGR 475
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
AGRDG+ + C+L+YR D +L+ +++ G L+ ++ + D CR+ A YF
Sbjct: 476 AGRDGKDSDCVLFYRGQDATRLAGLIYTDVDGTGKLHEMLRFAQDLRTCRKVAFAKYF 533
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFGLGIDK +VR+VIHH +SKS+E +YQ
Sbjct: 441 ATIAFGLGIDKGDVRYVIHHSMSKSLEGYYQ 471
>gi|395645604|ref|ZP_10433464.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
gi|395442344|gb|EJG07101.1| ATP-dependent DNA helicase, RecQ family [Methanofollis liminatans
DSM 4140]
Length = 506
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 68/177 (38%), Positives = 99/177 (55%), Gaps = 27/177 (15%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R R +SGI+Y +S K EDL +LR G +AYHA L + V
Sbjct: 224 RHRKESGIVYCSSKKTAEDLARDLRKYGYSAAAYHAGLPTAVRERVQDDFLSGRVQTVCA 283
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
++AFG+GIDKP+VR+V+H+ L K++E++YQE+GRAGRDG + C+L Y + + SM+
Sbjct: 284 TVAFGMGIDKPDVRYVVHYDLPKNLESYYQETGRAGRDGLDSECLLLYSPGEYGAVRSMI 343
Query: 175 F-------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
+ + L ++ YC + T CRR + +YF EA + C GMCD C G
Sbjct: 344 ERDTPDSRQARIAVRKLDEMIGYC-ETTVCRRKYLLNYFGEAHAPETC-GMCDTCEG 398
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 34/44 (77%), Gaps = 2/44 (4%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLD 64
++AFG+GIDKP+VR+V+H+ L K++E++YQ + A +D LD
Sbjct: 283 ATVAFGMGIDKPDVRYVVHYDLPKNLESYYQETGR--AGRDGLD 324
>gi|302799268|ref|XP_002981393.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
gi|300150933|gb|EFJ17581.1| hypothetical protein SELMODRAFT_10144 [Selaginella moellendorffii]
Length = 703
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 113/238 (47%), Gaps = 55/238 (23%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + P +K +E+ + + +SGIIY
Sbjct: 220 IIFRQTFNRPNLRY----------------SVVPKTKK-VYEEIDAFIKENYPRESGIIY 262
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + E+LR G ++ YHA ++ ++AFG+GI+K
Sbjct: 263 CFSKMDCERVCEQLRKTGHKIGFYHASMDPQERNRVQRMWSKDEINIICATVAFGMGINK 322
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK----LSSMVFDQ--- 177
P+VRFVIHH + KS+E ++QESGRAGRD A CILYY D + LS DQ
Sbjct: 323 PDVRFVIHHSIPKSIEGYHQESGRAGRDNLPASCILYYSYSDYVRVKHLLSQGAVDQTST 382
Query: 178 -------------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+T NL + +YC ++ CRR++ +F E + C+ CD+C
Sbjct: 383 GRSWNNSDTANQMKTNFDNLQRMGAYCENEVDCRRSLQLGHFGEKFDSASCKSTCDNC 440
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH + KS+E ++Q
Sbjct: 312 ATVAFGMGINKPDVRFVIHHSIPKSIEGYHQ 342
>gi|452992935|emb|CCQ95594.1| putative ATP-dependent DNA helicase recQ [Clostridium ultunense
Esp]
Length = 722
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 81/233 (34%), Positives = 116/233 (49%), Gaps = 48/233 (20%)
Query: 27 LGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSI 86
+G D+PN+ FYQV +D L D + FR +SGIIY +
Sbjct: 197 IGFDRPNL--------------FYQV----IKVRDKFKYLIDYLEENFREESGIIYCATR 238
Query: 87 KECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVR 128
K L E+L +G+ +YH ++SN + AFGLGIDKP++R
Sbjct: 239 KTVGSLTEKLIEKGISAVSYHGGMDSNTRQKNQDDFIYNKVRVIVATNAFGLGIDKPDIR 298
Query: 129 FVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK----LSSMVFDQ--QTGL- 181
FVIH+ + K+ME +YQE+GRAGRDG+ + CIL Y D+ K + S F Q +T L
Sbjct: 299 FVIHYNMPKNMEAYYQEAGRAGRDGEASDCILLYSPGDIVKQKFLIQSSTFSQERETMLY 358
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
NL ++ YC + +C R I YF E D + CD+C ++ VD+
Sbjct: 359 KNLQYLIDYC-NTNKCLRNSILKYFGEEIEDEK----CDNCGNCLSQSEMVDI 406
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 25/28 (89%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
AFGLGIDKP++RFVIH+ + K+ME +YQ
Sbjct: 287 AFGLGIDKPDIRFVIHYNMPKNMEAYYQ 314
>gi|355672742|gb|AER95092.1| Bloom syndrome, RecQ helicase-like protein [Mustela putorius furo]
Length = 843
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 77/211 (36%), Positives = 112/211 (53%), Gaps = 41/211 (19%)
Query: 49 FYQVRIKPAAQK-DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y + KP DCL+ + + + SGIIY S +EC+ + + L+ GL AYH
Sbjct: 286 YYVLPKKPKKVAFDCLE----WIRKHHPHDSGIIYCLSRRECDTMADTLQKDGLAALAYH 341
Query: 108 AKLESN-------------------VSIAFGLGIDKPNVRFVIHHCL----SKSMENFYQ 144
A L + +IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 342 AGLSDSARDEVQHKWVNQDGCQVICATIAFGMGIDKPDVRFVIHASLPKSVPKSVEGYYQ 401
Query: 145 ESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTR 196
ESGRAGRDG+ +HC+L+Y DV +L ++ ++ G NLY++V YC + T
Sbjct: 402 ESGRAGRDGETSHCLLFYTYHDVTRLKRLILMEKDGNHHTRETHFNNLYSMVHYCENITE 461
Query: 197 CRRAIIASYFDE-AWSDTECRG----MCDHC 222
CRR + +YF E ++ C+ CD+C
Sbjct: 462 CRRIQLLAYFGENGFNPDFCKKYPDVSCDNC 492
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/35 (60%), Positives = 26/35 (74%), Gaps = 4/35 (11%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCL----SKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 367 ATIAFGMGIDKPDVRFVIHASLPKSVPKSVEGYYQ 401
>gi|440748399|ref|ZP_20927652.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
gi|436483223|gb|ELP39291.1| ATP-dependent DNA helicase RecQ [Mariniradius saccharolyticus AK6]
Length = 725
Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 110/198 (55%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR P + + + + + + +SGIIY S K+ E++ E L+ G+ + YHA
Sbjct: 207 FYEVR--PKVKNETKKAIIKYIKSQ-KGKSGIIYCLSRKKVEEIAELLKVNGISAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ V +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLDQAVRIKNQDDFLNEEIDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++YR D+ KL V +++ L + +Y + + CRR ++ Y
Sbjct: 324 RDGLEGHCLMFYRYDDIIKLEKFNKDKPVTERENAKVLLEEMAAYA-ESSMCRRRVLLHY 382
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + +C G CD+C+
Sbjct: 383 FGEMLEE-DC-GYCDNCK 398
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|413920232|gb|AFW60164.1| hypothetical protein ZEAMMB73_604033 [Zea mays]
Length = 618
Score = 123 bits (308), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 70/188 (37%), Positives = 102/188 (54%), Gaps = 30/188 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN---------- 113
+L DL+ RF N+SGI+Y S EC D + LR + ++ + YHA L +
Sbjct: 428 QLGDLLKERFMNESGIVYCLSKNECADTAKFLREKYKIKCAHYHASLAARQRTSVQEKWH 487
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH+ LSKS+E++YQESGRAGRD AHCI+ Y+
Sbjct: 488 SGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDELPAHCIVLYQKK 547
Query: 166 DVFKLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR- 216
D ++ M+ + + + + +YC +T CRR + +F E + CR
Sbjct: 548 DFSRIVCMLRNGENFRSESFRVAMEQAKKMQAYCELKTECRRQALLQHFGEQYDRRRCRD 607
Query: 217 --GMCDHC 222
CD+C
Sbjct: 608 GPSPCDNC 615
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + +V +IAFG+GIDKP+VRFVIH+ LSKS+E++YQ
Sbjct: 486 WHSGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQ 526
>gi|321452682|gb|EFX64013.1| hypothetical protein DAPPUDRAFT_13555 [Daphnia pulex]
Length = 398
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 121/242 (50%), Gaps = 30/242 (12%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVR--FVIHHCLSKSM------ENFYQVRIKPAAQKDC 62
L+L RT+F V I G ++ + CL N I ++ ++
Sbjct: 154 LSLIRTTFPDVQITALTGTATLEMQRDVIASLCLRNPFIFPCVRANLKHSLISKSSFENG 213
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------- 113
+ L DL+ + F +QSGI+Y + C+ + E L + GL S YH+ L+
Sbjct: 214 MKILKDLILKDFLHQSGIVYCITKGNCQAIAEFLVSFGLAASYYHSGLDEARRNDIQEKW 273
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+IAFG+GI+KP VRFV H + KS++++YQE GRAGRDGQ+A C ++Y+
Sbjct: 274 MTGEVQIICATIAFGMGINKPYVRFVFHMSMPKSIDSYYQECGRAGRDGQLAFCTMFYKF 333
Query: 165 PDVFKLSSMVF--DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA--WSDTECRGMCD 220
D F+ S+++ Q L NL + ++C ++T CR IAS+ E D +CD
Sbjct: 334 SDYFEQQSLIYYEMQTVELVNLKKMATFCENRTVCRNVGIASFLAETPRPCDLHSTAICD 393
Query: 221 HC 222
C
Sbjct: 394 IC 395
>gi|393220095|gb|EJD05581.1| ATP-dependent DNA helicase [Fomitiporia mediterranea MF3/22]
Length = 878
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 74/214 (34%), Positives = 110/214 (51%), Gaps = 32/214 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRG---LRVSAY 106
Y+V KP++ + ++D + +N SGI+Y S K+ E + E L +R Y
Sbjct: 350 YRVVPKPSSSNGLIKAMSDYILNHHQNDSGIVYCMSKKDTEAVAEGLSKESGGKIRTGVY 409
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +IAFGLGIDK +VRFV+HH SKS+E +YQESGR
Sbjct: 410 HADIHDRDKANLHERWRRGEVKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGYYQESGR 467
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFD- 207
AGRDG+ + C+LY+R D +LS++V + G L +I+ + +D CR+ A YF
Sbjct: 468 AGRDGRDSDCLLYFRPQDASRLSALVCGELEGQGKLRDILRFAVDVEECRKLQFARYFST 527
Query: 208 ------EAW--SDTECRGMCDHCRGGRRDAKRVD 233
AW ++T+ C HC R + V+
Sbjct: 528 SASLSMSAWGTAETDAHARCGHCDNCTRPPESVE 561
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH SKS+E +YQ
Sbjct: 425 WRRGEVKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGYYQ 463
>gi|242071927|ref|XP_002451240.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
gi|241937083|gb|EES10228.1| hypothetical protein SORBIDRAFT_05g026350 [Sorghum bicolor]
Length = 624
Score = 122 bits (307), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 30/188 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN---------- 113
+L DL+ RF N+SGI+Y S EC D + LR + ++ + YHA L +
Sbjct: 434 QLGDLLKERFMNKSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWH 493
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQESGRAGRD AHCI+ Y+
Sbjct: 494 SGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDDLPAHCIVLYQKK 553
Query: 166 DVFKLSSMVFDQ--------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR- 216
D ++ M+ + + + + +YC +T CRR + +F E ++ CR
Sbjct: 554 DFSRIVCMLRNADNFKSESFKVAMEQAKKMQTYCELKTECRRQALLEHFGEQYNRQRCRD 613
Query: 217 --GMCDHC 222
CD+C
Sbjct: 614 GPSPCDNC 621
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + +V +IAFG+GIDKP+VRFVIH+ +SKS+E++YQ
Sbjct: 492 WHSGEVKVICATIAFGMGIDKPDVRFVIHNTMSKSIESYYQ 532
>gi|401401364|ref|XP_003880993.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
gi|325115405|emb|CBZ50960.1| hypothetical protein NCLIV_040350 [Neospora caninum Liverpool]
Length = 1699
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 82/249 (32%), Positives = 121/249 (48%), Gaps = 57/249 (22%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q + F D+PN+R+ ++P K ++++A + F SG
Sbjct: 852 QEPVVFQGSFDRPNLRY----------------EVRPKVTKRIIEDIATTIKTEFDGLSG 895
Query: 80 IIYTTSIKECEDLREELRNRGLRVSA--YHAKLESN------------------VSIAFG 119
I+Y S +ECE + E L+ R+SA YHA+L+ ++AFG
Sbjct: 896 IVYCLSRRECERVAEGLQKHA-RISAGFYHAQLDPEKREEIQRDWMNDDIKVIVATLAFG 954
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV----F 175
+GI+K +VRFVIH + K +ENFYQESGRAGR+G A CIL+Y D + S ++
Sbjct: 955 MGINKRDVRFVIHCAMPKCLENFYQESGRAGRNGDEASCILFYNYHDKQRQSHLIQLNSA 1014
Query: 176 DQQTGL------------ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
D +G NL +++YC ++ CRR I +F E + T C CD+C
Sbjct: 1015 DGPSGCRRHDDGQASRNEENLLPMLAYCEEEDECRRRFILRHFGEDFRGT-CAVACDNC- 1072
Query: 224 GGRRDAKRV 232
RR A RV
Sbjct: 1073 --RRRATRV 1079
>gi|254443570|ref|ZP_05057046.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
gi|198257878|gb|EDY82186.1| ATP-dependent DNA helicase RecQ [Verrucomicrobiae bacterium DG1235]
Length = 616
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/177 (39%), Positives = 99/177 (55%), Gaps = 27/177 (15%)
Query: 69 LMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL---------------ESN 113
+ SR F +SGIIY S K E + LR G+ AYHA + E
Sbjct: 227 VKSRPF--ESGIIYCFSRKATEQTADRLRQEGVEAIAYHAGMTPLQRAKNQDAFIRDEVK 284
Query: 114 V---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL 170
V +IAFG+GIDKPNVR+VIH + K++E +YQE+GRAGRDG + C++Y+ DV K
Sbjct: 285 VVCATIAFGMGIDKPNVRYVIHQDIPKNIEGYYQETGRAGRDGLPSECVMYFSPGDVAKQ 344
Query: 171 SSMVFDQQT-----GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + +++ L IV+Y + +RCRRA++ YF E W + C G CD+C
Sbjct: 345 LNFIAEKEPQEREVAKEQLRQIVNYA-ESSRCRRAVLLDYFSETWKEGNC-GNCDNC 399
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVR+VIH + K++E +YQ
Sbjct: 288 ATIAFGMGIDKPNVRYVIHQDIPKNIEGYYQ 318
>gi|328865354|gb|EGG13740.1| hypothetical protein DFA_11501 [Dictyostelium fasciculatum]
Length = 1329
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 27/209 (12%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
S+ F ++PN+ F + + K+ K+ ++ +A + + + SGI+
Sbjct: 807 SVCFKQSFNRPNLTFAV---MKKT--------------KEVIESIASFIKKTYPKSSGIV 849
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESNV-----SIAFGLGIDKPNVRFVIHHCLS 136
Y ++ D + G R V +IAFG+GI+KP+VRFVIHH L
Sbjct: 850 YC--LRLSSDFYHGSMDAGDRQRVQERWTRDRVKIICSTIAFGMGINKPDVRFVIHHSLP 907
Query: 137 KSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQT---GLANLYNIVSYCLD 193
K++E +YQESGRAGRDG+ +HC+LYY D F+ ++ + T NL +V+YC +
Sbjct: 908 KTLEGYYQESGRAGRDGKPSHCLLYYAYKDKFRYELLMQESNTPKENKENLGRVVAYCEN 967
Query: 194 QTRCRRAIIASYFDEAWSDTECRGMCDHC 222
CRR + SY E ++ C CD+C
Sbjct: 968 SIDCRRKLQLSYLGEDFNPKNCLKTCDNC 996
>gi|410029263|ref|ZP_11279099.1| ATP-dependent DNA helicase RecQ [Marinilabilia sp. AK2]
Length = 726
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 112/198 (56%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R P + + ++ + + + +SGIIY S K+ E++ E L+ G++ + YHA
Sbjct: 207 YYEIR--PKLKNETKKQIIKYIKSQ-KGKSGIIYCLSRKKVEEIAELLKVNGIKAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +V +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLDQSVRIKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++YR D+ KL V +++ L + +Y + + CRR + Y
Sbjct: 324 RDGLEGHCLMFYRYEDIIKLEKFNKDKPVTERENAKILLQEMAAYA-ESSICRRKFLLHY 382
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + +C G CD+C+
Sbjct: 383 FGEILEE-DC-GFCDNCK 398
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|406891234|gb|EKD36913.1| hypothetical protein ACD_75C01327G0003, partial [uncultured
bacterium]
Length = 782
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/233 (33%), Positives = 120/233 (51%), Gaps = 33/233 (14%)
Query: 32 PNVRFVIHHCLSKSMENFY-------QVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
P VR I L N Y + ++ A + + LD++ +L+++ + N+SGIIY
Sbjct: 4 PRVRDDIRQSLGIDAHNEYIGSFNRPNLFMEVAPKTEPLDQVLNLLAQ-YPNESGIIYCA 62
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
+ + + LR L +G V YHA L +IAFG+GI+KPN
Sbjct: 63 TRGQTDHLRSVLHRKGYSVRPYHAGLPEKERTENQERFSRDDIRIIVATIAFGMGINKPN 122
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGL 181
VRF++H+ L S++N+YQE GRAGRDG AHC+L + D+ K+ + +Q+T
Sbjct: 123 VRFIVHYDLPGSIDNYYQEIGRAGRDGLPAHCLLLFGYGDLQKVQFFIAQKTEQEQRTAN 182
Query: 182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
L ++ + + CRR + +YF E C GMCD+CR G + + VD+
Sbjct: 183 ILLSQLMGFA-ETDLCRRVPLLNYFGETGVPNRC-GMCDNCRMGEEEKELVDL 233
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVRF++H+ L S++N+YQ
Sbjct: 110 ATIAFGMGINKPNVRFIVHYDLPGSIDNYYQ 140
>gi|334183459|ref|NP_176289.7| RECQ helicase L4B [Arabidopsis thaliana]
gi|75334305|sp|Q9FT70.1|RQL4B_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 4B; AltName:
Full=RecQ-like protein 4B; Short=AtRecQ4B;
Short=AtRecQl4B
gi|11121451|emb|CAC14869.1| DNA Helicase [Arabidopsis thaliana]
gi|332195628|gb|AEE33749.1| RECQ helicase L4B [Arabidopsis thaliana]
Length = 1150
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
+ P K CL+++ + ++ GIIY S +CE + E LR G + + YH ++
Sbjct: 668 VVPKTNK-CLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPG 726
Query: 114 ------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ
Sbjct: 727 KRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 786
Query: 156 AHCILYYRLPDVFKLSSMVFDQ---------------------QTGLANLYNIVSYCLDQ 194
+ C+LYY D ++ M+ +T NL +VSYC ++
Sbjct: 787 SSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENE 846
Query: 195 TRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
CRR + + E + T C+ CD+C +
Sbjct: 847 VDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSK 878
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 746 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 775
>gi|12323338|gb|AAG51646.1|AC018908_12 putative DNA helicase; 33057-26178 [Arabidopsis thaliana]
Length = 1031
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
+ P K CL+++ + ++ GIIY S +CE + E LR G + + YH ++
Sbjct: 605 VVPKTNK-CLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEALRVFGHKAAFYHGSMDPG 663
Query: 114 ------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ
Sbjct: 664 KRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 723
Query: 156 AHCILYYRLPDVFKLSSMVFDQ---------------------QTGLANLYNIVSYCLDQ 194
+ C+LYY D ++ M+ +T NL +VSYC ++
Sbjct: 724 SSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENE 783
Query: 195 TRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
CRR + + E + T C+ CD+C +
Sbjct: 784 VDCRRFLQLVHLGEKFDSTNCKNTCDNCSSSK 815
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 683 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 712
>gi|218194880|gb|EEC77307.1| hypothetical protein OsI_15961 [Oryza sativa Indica Group]
Length = 2505
Score = 122 bits (306), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 114/237 (48%), Gaps = 54/237 (22%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + P +K CL+++ + + + GIIY
Sbjct: 1952 IIFRQSFNRPNLRYFVW----------------PKTKK-CLEDIHNFIHANHNKECGIIY 1994
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + +LR G + S YH ++ ++AFG+GI+K
Sbjct: 1995 CLSRMDCEKVAAKLREYGHKASHYHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINK 2054
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---FDQQ--- 178
P+VRFVIHH L KS+E ++QE GRAGRD Q++ C+L+Y D +L MV F +Q
Sbjct: 2055 PDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSSCVLFYNYSDYIRLKHMVTQGFAEQGTS 2114
Query: 179 -------------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
T NL +VSYC + CRR + +F E ++ + C CD+C
Sbjct: 2115 APRGGSSQEQALETHKENLLRMVSYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNC 2171
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 2044 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 2074
>gi|47224193|emb|CAG13113.1| unnamed protein product [Tetraodon nigroviridis]
Length = 827
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 78/253 (30%), Positives = 122/253 (48%), Gaps = 41/253 (16%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVR---------IKPAAQKD 61
L+ R F QV + P V+ IH+ L+ + + + P K
Sbjct: 204 LHELRKKFPQVPMMALTATATPRVQKDIHNQLNMRQPQVFTMSFNRTNLKYAVLPKKPKK 263
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
++ + + + SGIIY S +C+ + E L+ GL +YHA L
Sbjct: 264 VDEDCISWIKKHYPRDSGIIYCLSRNDCDTMAESLQRAGLLALSYHAGLRDGEREYVQTK 323
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+I+ CIL+Y
Sbjct: 324 WINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISQCILFY 383
Query: 163 RLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDT 213
DV ++ ++ + T NL+++V +C + CRR + +YF E ++ +
Sbjct: 384 SYTDVHRIKRIISMDREGDGHTKATHYNNLHSMVHFCENAMECRRIQLLAYFGELKFNRS 443
Query: 214 ECRG----MCDHC 222
C+ CD+C
Sbjct: 444 FCKEHADVSCDNC 456
>gi|328770877|gb|EGF80918.1| hypothetical protein BATDEDRAFT_10941 [Batrachochytrium
dendrobatidis JAM81]
Length = 573
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 97/175 (55%), Gaps = 25/175 (14%)
Query: 74 FRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VS 115
+ N SGIIY +S K CE +L G++ + YHA L+ +
Sbjct: 266 YPNASGIIYCSSRKACEATSAKLCKLGIKAAFYHAGLDKEDRSRIQTAWATNSVHIIVAT 325
Query: 116 IAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF 175
IAFG+GIDK +VRFVIH+ + +S+E +YQE+GRAGRDG+ + CILYY D + ++
Sbjct: 326 IAFGMGIDKGDVRFVIHYSIPQSLEGYYQETGRAGRDGKDSMCILYYAYKDKSTIDFLIE 385
Query: 176 DQQTGLA-------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + NL I+SYC + CRR + +YF E + ++CR CD+C+
Sbjct: 386 NGEGNYEQKERQRNNLRQIISYCENLVDCRRQQVLAYFGERFDKSQCRQTCDNCQ 440
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 85/188 (45%), Gaps = 26/188 (13%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLM 70
W T+ + +IAFG+GIDK +VRFVIH+ + +S+E +YQ + A +D D + ++
Sbjct: 314 WATNSVHIIVATIAFGMGIDKGDVRFVIHYSIPQSLEGYYQETGR--AGRDGKDSMC-IL 370
Query: 71 SRRFRNQSGIIYTTSIKECE-DLREELRNRGLRVSAYHAKL----ESNVSIAFGLGIDKP 125
++++S I + E + +E RN ++ +Y L V FG DK
Sbjct: 371 YYAYKDKSTIDFLIENGEGNYEQKERQRNNLRQIISYCENLVDCRRQQVLAYFGERFDKS 430
Query: 126 NVRFVIHHC-------------LSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
R +C ++KS+ Q + I HC+ +R K+ S
Sbjct: 431 QCRQTCDNCQREGGATVKDITEITKSIIKIVQ--AIQNQKITINHCVDIFRGSKQAKIMS 488
Query: 173 MVFDQQTG 180
M+ DQ G
Sbjct: 489 MMHDQIEG 496
>gi|340348782|ref|ZP_08671813.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
gi|339613206|gb|EGQ17991.1| ATP-dependent helicase RecQ [Prevotella nigrescens ATCC 33563]
Length = 727
Score = 122 bits (305), Expect = 1e-25, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++D ++ + + +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVRPK-KNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL + V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGKCIVFYSKNDLKKLENFMEGKPVAEQDIGRQLLQETETYA-ESSVCRRKLLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 388 FGEEYTKDNC-GMCDNC 403
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|311746386|ref|ZP_07720171.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
gi|126575272|gb|EAZ79604.1| ATP-dependent DNA helicase RecQ [Algoriphagus sp. PR1]
Length = 725
Score = 122 bits (305), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 113/202 (55%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR P + + +L + + + +SGIIY S K+ E++ + L+ + + YHA
Sbjct: 207 FYEVR--PKMKNESKKQLIKFI-KNHKGKSGIIYCLSRKKVEEIAQLLQVNQINAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S + +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLDSAIRIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++YR D+ KL V +++ L+ + +Y + CRR I +Y
Sbjct: 324 RDGLEGHCLMFYRYEDIVKLEKFNKDKPVTERENARVLLHEMAAYA-ETGVCRRKFILNY 382
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E + + +C G CD+C+ R
Sbjct: 383 FGETF-EKDC-GYCDNCKKDRE 402
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|297837387|ref|XP_002886575.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297332416|gb|EFH62834.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1172
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 103/212 (48%), Gaps = 40/212 (18%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
+ P K CL+++ + ++ GIIY S +CE + E LR G + + YH ++
Sbjct: 693 VVPKTNK-CLEDIDKFIRENHFDECGIIYCLSRMDCEKVTEMLRAFGHKAAFYHGSMDPG 751
Query: 114 ------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ
Sbjct: 752 KRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 811
Query: 156 AHCILYYRLPDVFKLSSMVFDQ---------------------QTGLANLYNIVSYCLDQ 194
+ C+LYY D ++ M+ +T NL +VSYC ++
Sbjct: 812 SSCVLYYSYTDYIRVKHMISQGGLGQGQMKMGYNCKASSGRMLETNTENLLRMVSYCENE 871
Query: 195 TRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
CRR + + E + T C+ CD+C +
Sbjct: 872 VDCRRFLQLVHLGEKFDSTNCKKTCDNCSSSK 903
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 770 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 800
>gi|348506232|ref|XP_003440664.1| PREDICTED: Bloom syndrome protein homolog [Oreochromis niloticus]
Length = 1403
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-- 113
P K ++ + + + SGI+Y S +C+ + E L+ GL +YHA L +
Sbjct: 859 PKKPKKVDEDCTSWIKKHYPRDSGIVYCLSRNDCDAMAESLQRAGLSALSYHAGLSDSDR 918
Query: 114 -----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIA 156
+IAFG+GIDKP+VR+VIH L KSME +YQESGRAGRDG+I+
Sbjct: 919 EYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSMEGYYQESGRAGRDGEIS 978
Query: 157 HCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
HCIL+Y DV ++ ++ + T NL+++V +C + CRR + +YF E
Sbjct: 979 HCILFYSYTDVQRIKRIISMDREGDRHTKATHYNNLHSMVHFCENVMECRRIQLLAYFGE 1038
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KSME +YQ
Sbjct: 936 ATIAFGMGIDKPDVRYVIHASLPKSMEGYYQ 966
>gi|193212332|ref|YP_001998285.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
gi|193085809|gb|ACF11085.1| ATP-dependent DNA helicase RecQ [Chlorobaculum parvum NCIB 8327]
Length = 609
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 86/241 (35%), Positives = 122/241 (50%), Gaps = 35/241 (14%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
+A T Q I LG+ P FV+ + Y+VR K A + +L
Sbjct: 177 VAAFTATATQKVQRDIVSKLGLRDP---FVLRASFDRPNLT-YEVRFKEAGES----QLV 228
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL---------------ES 112
L++ F QSGIIY TS K D L+ RG+R YHA L E
Sbjct: 229 SLLNE-FSGQSGIIYRTSRKSVNDTAAMLQKRGIRALPYHAGLADRERHDNQEAFIRDEV 287
Query: 113 NV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV-- 167
+V ++AFG+GIDK NVRFVIH L KS+E++YQE+GRAGRDG+ + CI+ + D+
Sbjct: 288 DVIVATVAFGMGIDKSNVRFVIHADLPKSIESYYQETGRAGRDGENSRCIMLFSHADIPK 347
Query: 168 --FKLSSMVFDQQ--TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
F + +M+ + + L L +V++ T CRR ++ +FDE C G CD C+
Sbjct: 348 VRFFIDAMLDEDERRRALDALSKVVAFA-SSTVCRRRMLLEHFDEELPGDNC-GSCDVCQ 405
Query: 224 G 224
G
Sbjct: 406 G 406
>gi|270010585|gb|EFA07033.1| hypothetical protein TcasGA2_TC010005 [Tribolium castaneum]
Length = 1017
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 30/202 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P ++E+ L+ +RF +SGIIY +CE L E+L G++ AYHA +
Sbjct: 494 RVIPKNGIKVVEEITKLIKQRFYRKSGIIYCLCRADCEKLAEDLCKLGIKAKAYHAGMSD 553
Query: 113 NV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
++ +IAFG+GIDKP+VRFVIH+ + KS+E FYQESGRAGRDG+
Sbjct: 554 SIREKQQREWMQDQFHVIVATIAFGMGIDKPDVRFVIHNSMPKSVEAFYQESGRAGRDGE 613
Query: 155 IAHCILYYRLPDVFKLSS-MVFDQQTG-------LANLYNIVSYCLDQTRCRRAIIASYF 206
++ L+Y D +L M D+ NLY +VS+C + CRR + +
Sbjct: 614 PSYSYLFYSYADAGRLKRLMQMDRGVNKNALHGHYENLYQMVSFCENIVDCRRYLQLIHL 673
Query: 207 DEAWSDTECRG----MCDHCRG 224
E + C MCD+C
Sbjct: 674 GEKFDRKICMENKAMMCDNCEN 695
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E FYQ
Sbjct: 573 ATIAFGMGIDKPDVRFVIHNSMPKSVEAFYQ 603
>gi|297739574|emb|CBI29756.3| unnamed protein product [Vitis vinifera]
Length = 1235
Score = 121 bits (303), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 104/204 (50%), Gaps = 41/204 (20%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL--------- 110
+ CLD++ + ++ GIIY S +CE + E L+ G + + YH +
Sbjct: 640 RKCLDDIDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPARRAFVQ 699
Query: 111 ------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
E N+ ++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 700 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 759
Query: 162 YRLPDVFKLSSMVFD---QQTGLA--------------------NLYNIVSYCLDQTRCR 198
Y D ++ M+ +Q+ LA NL +VSYC + CR
Sbjct: 760 YSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYCENDVDCR 819
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R + +F E + C+ CD+C
Sbjct: 820 RLLQLVHFGEKFDSAHCKKTCDNC 843
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 712 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 742
>gi|412985574|emb|CCO19020.1| predicted protein [Bathycoccus prasinos]
Length = 1352
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 113/218 (51%), Gaps = 45/218 (20%)
Query: 50 YQVRIKPAAQKDCLDELADLM------SRRFRNQSGIIYTTSIKECEDLREEL--RNR-- 99
Y+V I +K ++E+ L+ RR R + GI+Y S +CE + L +N
Sbjct: 681 YEV-IPKKKEKQNVEEILSLIHDRGFVDRRGRVECGIVYCFSKNDCEKMANALCLKNNQD 739
Query: 100 -----GLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLS 136
G++ YHA L+ V +IAFG+GI+KP+VR+V HH +
Sbjct: 740 SRFRHGIKALPYHAGLDDKVRKAHQEAWTNDTCNIICATIAFGMGINKPDVRYVFHHSMP 799
Query: 137 KSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-----------QQTGLANLY 185
KS+E ++QESGRAGRDG+ A C+L+Y DV K SM+ D + L +L
Sbjct: 800 KSLEAYHQESGRAGRDGEKALCVLFYSWGDVTKARSMLIDSAEKDNAPHEVKMNKLESLV 859
Query: 186 NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ +YC + CRR + +F+E + + C+GMCD C+
Sbjct: 860 TMCTYCENTADCRRTQLLRHFNENFDRSRCKGMCDCCQ 897
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VR+V HH + KS+E ++Q
Sbjct: 777 ATIAFGMGINKPDVRYVFHHSMPKSLEAYHQ 807
>gi|393247277|gb|EJD54785.1| ATP-dependent DNA helicase [Auricularia delicata TFB-10046 SS5]
Length = 819
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 78/230 (33%), Positives = 110/230 (47%), Gaps = 52/230 (22%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y V KP+ L +AD + SGI+Y S K+ E + L+ RG+R YHA
Sbjct: 330 YSVLPKPSGAVAALTTMADYILASHAEDSGIVYCLSKKDTESVAMGLQERGIRSGIYHAD 389
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ +IAFGLGIDK +VRFV+HH +SKS+E +YQESGRAGR
Sbjct: 390 IGDEEKERLHVRWRKGQVKVVCATIAFGLGIDKGDVRFVLHHTMSKSLEGYYQESGRAGR 449
Query: 152 DGQIAHCILYYR-----------LP---------------DVFKLSSMVFDQQTGLANLY 185
DG+ A C+L+YR LP D +LSS+V ++ G ++
Sbjct: 450 DGKDADCVLFYRGAFTSAPIQAFLPRVCTGHLSIFLAVGQDATRLSSLVANEPEGQHKVH 509
Query: 186 NIVSYCLDQTRCRRAIIASYF-------DEAW-SDTECRGMCDHCRGGRR 227
+++ + D CR+ + A YF AW + T+ C HC RR
Sbjct: 510 SMLKFAQDLRGCRKLLFADYFSVSSSLALSAWGAATDAGAKCGHCDNCRR 559
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH +SKS+E +YQ
Sbjct: 402 WRKGQVKVVCATIAFGLGIDKGDVRFVLHHTMSKSLEGYYQ 442
>gi|329957341|ref|ZP_08297861.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
gi|328523054|gb|EGF50157.1| ATP-dependent DNA helicase RecQ [Bacteroides clarus YIT 12056]
Length = 727
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 106/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDKDIIKFI-----KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLH 385
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E +++ C G CD+C
Sbjct: 386 YFGEEYTEENC-GNCDNC 402
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|167765436|ref|ZP_02437549.1| hypothetical protein BACSTE_03826 [Bacteroides stercoris ATCC
43183]
gi|167697064|gb|EDS13643.1| ATP-dependent DNA helicase RecQ [Bacteroides stercoris ATCC 43183]
Length = 727
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 106/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDKDIIKFI-----KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLH 385
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E +++ C G CD+C
Sbjct: 386 YFGEEYTEENC-GNCDNC 402
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|343473260|emb|CCD14808.1| unnamed protein product, partial [Trypanosoma congolense IL3000]
Length = 1399
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 107/196 (54%), Gaps = 27/196 (13%)
Query: 60 KDCLDELADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----- 113
K + +AD++ +F +S GI+Y S K CE++ + L G+R S YH+ +
Sbjct: 634 KGVAEVVADIIKNQFPRRSCGIVYCLSRKNCENMSKALTAHGIRASYYHSDADEKNERQE 693
Query: 114 -----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG + CIL Y
Sbjct: 694 QWTKDELQVLCATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLASQCILLY 753
Query: 163 RLPDVFKLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR--- 216
D S M++ D + L++L ++++Y L+ +CRR +F E SD C
Sbjct: 754 SPNDKHCHSHMIYGTKDWRASLSSLTHMLAYTLNNVQCRRMQQLGHFGEHVSDQYCLLQP 813
Query: 217 ----GMCDHCRGGRRD 228
+CD+C +RD
Sbjct: 814 DGSVEVCDNCASRKRD 829
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 695 WTKDELQVLCATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 735
>gi|38345369|emb|CAE03209.2| OSJNBa0088K19.8 [Oryza sativa Japonica Group]
Length = 1164
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 54/237 (22%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + P +K CL+++ + + + GIIY
Sbjct: 620 IIFRQSFNRPNLRYFVW----------------PKTKK-CLEDIHNFIHANHNKECGIIY 662
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + +LR G S YH ++ ++AFG+GI+K
Sbjct: 663 CLSRMDCEKVAAKLREYGHTASHYHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINK 722
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---FDQQ--- 178
P+VRFVIHH L KS+E ++QE GRAGRD Q++ C+L+Y D +L MV F +Q
Sbjct: 723 PDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTS 782
Query: 179 -------------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
T NL +VSYC + CRR + +F E ++ + C CD+C
Sbjct: 783 APRGGSSQEQALETHKENLLRMVSYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNC 839
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 712 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 742
>gi|389749352|gb|EIM90529.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 669
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/201 (35%), Positives = 104/201 (51%), Gaps = 32/201 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y VR KP +AD + ++G+IY T CE + ++LR GL+ +HAK
Sbjct: 369 YSVRKKPGGS--LFRTIADYIKNTHPGKAGVIYCTGRDTCERVAKDLRGMGLKARHFHAK 426
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
+ +IAFG+GI+K NVRFVIH+ L S+ +YQE+GRAGR
Sbjct: 427 MVDADKQKTLQDWKDGFSDIIVATIAFGMGINKANVRFVIHYDLPSSLIGYYQETGRAGR 486
Query: 152 DGQIAHCILYYRLPD---VFK-------LSSMVFDQQTGLANLYNIVSYCLDQTRCRRAI 201
DG+ A C+L+Y D +FK L D+Q +A + ++ + L++ CRRA
Sbjct: 487 DGEKADCLLFYSWKDCQILFKRIRENEELKQEDKDRQ--MAEVGQVIQFSLNEADCRRAQ 544
Query: 202 IASYFDEAWSDTECRGMCDHC 222
I +F E + EC G CD+C
Sbjct: 545 ILQHFAEPFDPAECHGTCDNC 565
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
L W+ F + +IAFG+GI+K NVRFVIH+ L S+ +YQ + A +D E A
Sbjct: 436 LQDWKDGFSDIIVATIAFGMGINKANVRFVIHYDLPSSLIGYYQETGR--AGRDG--EKA 491
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
D + I++ I+E E+L++E ++R +
Sbjct: 492 DCLLFYSWKDCQILF-KRIRENEELKQEDKDRQM 524
>gi|225448193|ref|XP_002265586.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Vitis
vinifera]
Length = 1224
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 42/210 (20%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL--- 110
+ P +K CLD++ + ++ GIIY S +CE + E L+ G + + YH +
Sbjct: 624 VLPKTRK-CLDDIDKFIRENHFDECGIIYCLSRLDCEKVAERLQECGHKAAFYHGSMDPA 682
Query: 111 ------------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
E N+ ++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ
Sbjct: 683 RRAFVQKQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQR 742
Query: 156 AHCILYYRLPDVFKLSSMVFD---QQTGLA--------------------NLYNIVSYCL 192
+ C+LYY D ++ M+ +Q+ LA NL +VSYC
Sbjct: 743 SSCVLYYSYSDYIRVKHMITQGVVEQSPLASGQNRSNMASSGRILETNTENLLRMVSYCE 802
Query: 193 DQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ CRR + +F E + C+ CD+C
Sbjct: 803 NDVDCRRLLQLVHFGEKFDSAHCKKTCDNC 832
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 701 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 731
>gi|78187521|ref|YP_375564.1| ATP-requiring DNA helicase RecQ [Chlorobium luteolum DSM 273]
gi|78167423|gb|ABB24521.1| ATP-dependent DNA helicase RecQ [Chlorobium luteolum DSM 273]
Length = 615
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 76/198 (38%), Positives = 100/198 (50%), Gaps = 29/198 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+V K +A + L L RRF ++GIIY S K D LR +G R YHA
Sbjct: 212 YEVLFKDSADRQILSIL-----RRFSGKAGIIYRASRKSVNDTAAMLRAKGFRALPYHAG 266
Query: 110 LESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGR 151
L+ ++AFG+GIDK N+RFVIH L KS+EN+YQE+GRAGR
Sbjct: 267 LDDREREQNQNAFIRDEVDVIIATVAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGR 326
Query: 152 DGQIAHCILYYRLPDVFK----LSSMVFDQQTGLANL-YNIVSYCLDQTRCRRAIIASYF 206
DG+ AHC L Y D+ K + +M ++ A + VS CRR + +F
Sbjct: 327 DGEPAHCTLLYSQGDIAKVRFFIDAMADGEERARALFALSTVSAFAASAVCRRRALLEHF 386
Query: 207 DEAWSDTECRGMCDHCRG 224
EA+S C G CD C G
Sbjct: 387 GEAYSKDNC-GSCDVCTG 403
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK N+RFVIH L KS+EN+YQ
Sbjct: 290 TVAFGMGIDKSNIRFVIHADLPKSIENYYQ 319
>gi|150025301|ref|YP_001296127.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
gi|149771842|emb|CAL43316.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium psychrophilum
JIP02/86]
Length = 731
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 72/195 (36%), Positives = 107/195 (54%), Gaps = 29/195 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + ++ + +SGIIY S K+ E + + L+ G+ YHA
Sbjct: 212 YYEVRTK---TKNVESDIIRFI-KQHKGKSGIIYCLSRKKVEAIAQVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY DV KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQEVGFALLQEVVAYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRGMCD 220
F E + D+E CD
Sbjct: 387 FGEEF-DSETGDGCD 400
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|46107486|ref|XP_380802.1| hypothetical protein FG00626.1 [Gibberella zeae PH-1]
Length = 482
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 94/180 (52%), Gaps = 28/180 (15%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
D M+ R N GIIYT S ECE L LR+ G+ +HA+L +V
Sbjct: 262 DQMNERVDNVPGIIYTISRDECESLAASLRSEGIGARPFHARLPKDVKEETLARWINNEV 321
Query: 115 -------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+ AFG+GIDK NVRFV+H + KS E +YQE+GRAGRDG ++C LYY D+
Sbjct: 322 GYDIIVATTAFGMGIDKDNVRFVVHWRIPKSFEGYYQEAGRAGRDGNASYCFLYYSREDL 381
Query: 168 FKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+++ ++ +Q L +L + YC D +CR A I YF E S +C CD
Sbjct: 382 ERVTRLIRSDSKEETNQIARLKSLQALAQYCEDTDKCRHAAICKYFGET-SIPDCDFACD 440
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H + KS E +YQ
Sbjct: 328 ATTAFGMGIDKDNVRFVVHWRIPKSFEGYYQ 358
>gi|390943602|ref|YP_006407363.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
gi|390417030|gb|AFL84608.1| ATP-dependent DNA helicase RecQ [Belliella baltica DSM 15883]
Length = 725
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 67/198 (33%), Positives = 111/198 (56%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P + + ++ + + + +SGIIY S K+ E++ L+ G+ + YHA
Sbjct: 207 YYEVR--PKIKNETKKQIIKYIKGQ-KGKSGIIYCLSRKKVEEIASLLKVNGINAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ NV +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 264 GLDQNVRIKNQDDFLNEELDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRAG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++Y+ D+ KL V +++ L + +Y + + CRR + Y
Sbjct: 324 RDGLEGHCLMFYKYDDIIKLDKFNKDKPVTERENAKILLQEMAAYA-ESSICRRKTLLHY 382
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + + +C G CD+C+
Sbjct: 383 FGE-YMEKDC-GFCDNCK 398
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|166240658|ref|XP_645178.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
gi|165988694|gb|EAL71344.2| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
discoideum AX4]
Length = 973
Score = 120 bits (302), Expect = 3e-25, Method: Composition-based stats.
Identities = 75/247 (30%), Positives = 117/247 (47%), Gaps = 75/247 (30%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
YQVR K + ++ L ++ + +S ++ N +GIIY +++ECE + + L RGL + YHA
Sbjct: 675 LYQVRQKQSDEESLLKDIYNFISFKYPNSTGIIYCATVRECEIVADYLSERGLSSNFYHA 734
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
KL + +IAFG+GIDK + RFVIHH + +SME++YQ++GRAG
Sbjct: 735 KLSNTQRSKLQKDWTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMPQSMESYYQQTGRAG 794
Query: 151 RDGQIAHCILYY------RLPDVFKLSS-----------------------MVFD----- 176
RDG+ + C+L+Y R + L+ ++ D
Sbjct: 795 RDGKHSDCLLFYNKSDLMRFKHIISLNQPKDPFNAFSNYNGVGIGDIGGEHLILDNDGNY 854
Query: 177 -------------------QQTG--LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
QQT L L ++ S+C Q++CRR + +YF E + C
Sbjct: 855 ISNYSSDESQYMDTIKNKIQQTSTKLEMLDSVASFCSTQSKCRRVTLLNYFGE--NSKSC 912
Query: 216 RGMCDHC 222
MCD C
Sbjct: 913 GNMCDIC 919
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK + RFVIHH + +SME++YQ
Sbjct: 759 TIAFGMGIDKGDTRFVIHHSMPQSMESYYQ 788
>gi|296274236|ref|YP_003656867.1| ATP-dependent DNA helicase RecQ [Arcobacter nitrofigilis DSM 7299]
gi|296098410|gb|ADG94360.1| ATP-dependent DNA helicase RecQ [Arcobacter nitrofigilis DSM 7299]
Length = 702
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/222 (36%), Positives = 113/222 (50%), Gaps = 37/222 (16%)
Query: 40 HCLSKSMENFYQVRIKP---AAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL 96
H +K++ N ++++P +K L L + + GIIYT + KE E + L
Sbjct: 194 HFRAKTIRNNLDIKVEPRISNGKKQILSFL-----KAHKGLCGIIYTFTRKEAESTAQFL 248
Query: 97 RNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKS 138
G AYHA L V +IAFG+GIDK N+RFVIH L K+
Sbjct: 249 CENGYTAKAYHAGLSPAVKDEVYDDFVYEKIDIVVATIAFGMGIDKSNIRFVIHTSLPKT 308
Query: 139 MENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYNIVSYCL 192
+EN+YQE GRAGRDG +++ L Y D K + D +QTGL L + YC+
Sbjct: 309 LENYYQEIGRAGRDGDMSYVYLLYSKSDEVKRKIQIEDAIDTGYKQTGLDKLEAMYRYCV 368
Query: 193 DQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
CR IIA+YF++ D C+ +CD+C G D ++VDV
Sbjct: 369 -SNNCRHKIIANYFEDECED--CKTLCDNCTKG--DIEQVDV 405
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK N+RFVIH L K++EN+YQ
Sbjct: 285 TIAFGMGIDKSNIRFVIHTSLPKTLENYYQ 314
>gi|325300153|ref|YP_004260070.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
gi|324319706|gb|ADY37597.1| ATP-dependent DNA helicase RecQ [Bacteroides salanitronis DSM
18170]
Length = 727
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 25/180 (13%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G++ YHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEELAEILQANGIKARPYHAGMDSATRNANQDAFLKEDIDVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRFVIHYDMPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
V +Q+ G L +Y + + CRR ++ YF E +++ C G CD+C ++ + D
Sbjct: 355 VSEQEIGKQLLLETAAYA-ESSLCRRKVLLHYFGEEYTEDNC-GNCDNCLNPKKQVEAQD 412
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDMPKSLEGYYQ 320
>gi|224123710|ref|XP_002330189.1| predicted protein [Populus trichocarpa]
gi|222871645|gb|EEF08776.1| predicted protein [Populus trichocarpa]
Length = 588
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 30/193 (15%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
K+ L +L DL+ RF+NQ GI+Y S EC ++ + L + ++ YHA L +
Sbjct: 391 KESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDV 450
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIH+ LSKS+E++YQESGRAGRD A CI
Sbjct: 451 QRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIA 510
Query: 161 YYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
Y+ D ++ M+ Q +A + SYC + CRR ++ +F E++
Sbjct: 511 LYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKVECRRQVLLEHFGESFDQ 570
Query: 213 TECR---GMCDHC 222
C+ CD+C
Sbjct: 571 KACKFGSNPCDNC 583
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T + +IAFG+GIDKP+VRFVIH+ LSKS+E++YQ
Sbjct: 454 WHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQ 494
>gi|358396986|gb|EHK46361.1| hypothetical protein TRIATDRAFT_291559 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 77/183 (42%), Positives = 94/183 (51%), Gaps = 29/183 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------- 114
ELA L R N SGIIYTTS ECE L LR+ G+ +HAKL S V
Sbjct: 260 ELARLRER-IENVSGIIYTTSRGECESLAASLRDAGIGARPFHAKLPSEVKEDTLANWIN 318
Query: 115 ----------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
+ AFG+GIDK NVRFV+H L KS E +YQE GRAGRDG +C LYY
Sbjct: 319 NERGYDIIVATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQEVGRAGRDGNAGYCFLYYSR 378
Query: 165 PDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
D+ + M+ + QT L +L + YC + + CR A I YF E + EC
Sbjct: 379 EDLERACRMIKSDAQMDANYQTRLKSLQALAQYCENISACRHASICKYFGEE-TIPECDF 437
Query: 218 MCD 220
CD
Sbjct: 438 ACD 440
Score = 45.4 bits (106), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQ 358
>gi|392591898|gb|EIW81225.1| ATP-dependent DNA helicase [Coniophora puteana RWD-64-598 SS2]
Length = 777
Score = 120 bits (302), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 124/276 (44%), Gaps = 54/276 (19%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQK-----DC 62
+ L T Q I L +D+ N+ +H ++ FY+VR K +
Sbjct: 172 VMALTATATPSVQRDIIRSLRMDEQNMYKAVHPFNRDNL--FYEVRYKSGVDPLSRMAEV 229
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------- 114
LD + L RR R SGIIY + C+DL LR +GL YH ++SNV
Sbjct: 230 LDFITTLYRRRERPSSGIIYCRTRATCDDLSAFLRGKGLSARPYHRGIKSNVLDTTLKQW 289
Query: 115 ---------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDK +VR+VIH+ L S+E +YQE+GRAGRDG + CI
Sbjct: 290 ENGGNGEGGVDVVCATIAFGMGIDKADVRYVIHYDLPHSLEGYYQETGRAGRDGAASRCI 349
Query: 160 LYYRLPDVFKLSSMVFD-----------------QQTGLANLYNIVSYCLDQTRCRRAII 202
LYY D ++ +V D Q + + ++ + + CR +I
Sbjct: 350 LYYSREDAYQAQRLVADSHIKRQTSAEEMNGPQPSQRSINSFSTLIDFAENVNICRHVLI 409
Query: 203 ASYFDEA--WSDTE-----CRGMCDHCRGGRRDAKR 231
YF E SD + C GMCD C+ + +R
Sbjct: 410 CRYFGEVVDISDRDQLQSYCDGMCDVCKYPEKTRRR 445
>gi|56461647|ref|YP_156928.1| superfamily II DNA helicase [Idiomarina loihiensis L2TR]
gi|56180657|gb|AAV83379.1| Superfamily II DNA helicase, RecQ [Idiomarina loihiensis L2TR]
Length = 614
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+V+ Q + KP L ++ D + ++ + +GIIY S K+
Sbjct: 210 DRPNIRYVV------------QEKYKP------LKQVRDYVKKQ-KGAAGIIYCGSRKKT 250
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
E+L E L+ G+R + YHA +E + ++AFG+GI+KPN+RFVI
Sbjct: 251 EELSESLQQAGVRAAPYHAGIEHQIKESTLRQFLRDDIDVVVATVAFGMGINKPNIRFVI 310
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGL-----ANLYN 186
H + +S+E++YQE+GRAGRDG A ++ Y D + M+ DQ+ A ++
Sbjct: 311 HFDIPRSVESYYQETGRAGRDGLPAEAVMLYDPRDAQWIRRMIEDQENEQRRLVEAQKFS 370
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF+E +SD EC G CD C
Sbjct: 371 AMQAMAEAQTCRRLVVLNYFNE-YSDKEC-GNCDLC 404
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPN+RFVIH + +S+E++YQ
Sbjct: 294 TVAFGMGINKPNIRFVIHFDIPRSVESYYQ 323
>gi|356528815|ref|XP_003532993.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1160
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 69/204 (33%), Positives = 107/204 (52%), Gaps = 41/204 (20%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL--------- 110
K CL+++ + ++ GIIY S +CE + E+L+ G + + YH +
Sbjct: 614 KKCLEDIDKFIRVNHFDECGIIYCLSRMDCEKVAEKLQECGHKCAFYHGSMDPAQRASVQ 673
Query: 111 ------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
E N+ ++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + CILY
Sbjct: 674 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCILY 733
Query: 162 YRLPDVFKLSSMV----FDQ-------------------QTGLANLYNIVSYCLDQTRCR 198
Y D ++ M+ +Q +T NL +VSYC + CR
Sbjct: 734 YNYSDYIRVKHMLSQGAIEQSSMTSGYNRSNMINSGRILETNTENLVRMVSYCENDVDCR 793
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R + ++F E ++ + C+ CD+C
Sbjct: 794 RLLQLAHFGEKFNSSTCQKTCDNC 817
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 686 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 716
>gi|167381749|ref|XP_001735842.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165902008|gb|EDR27948.1| hypothetical protein EDI_175610 [Entamoeba dispar SAW760]
Length = 765
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 52/229 (22%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-PAAQKDCLDELADLMSRRFRNQSGI 80
+I F ++PN+R Y++R K P+ + D + ++ NQ GI
Sbjct: 540 AIVFNQTFNRPNLR--------------YEMRFKLPSVEFDIACYI-----QQHPNQCGI 580
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
++ S K+CE+L + L N G+R + YHA L+ ++AFG+GI
Sbjct: 581 VFCLSKKDCENLSKFLVNYGIRATYYHAGLDPKRRKQVQNDWMNGIFLVVCATVAFGMGI 640
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL---------SSM 173
DKP+VRFVIH + S+E ++QE+GRAGRDG+ + CI+Y+ D+ ++ + +
Sbjct: 641 DKPDVRFVIHQTMPSSIEQYFQEAGRAGRDGKPSDCIIYFNTNDIARVKWVKRNMGENEL 700
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
Q+ + + VS C + CRR I YFDE++++ +C G CD+C
Sbjct: 701 TPSQEQSINAM---VSLC-ETDECRRKIQLMYFDESFNEEKCTG-CDNC 744
>gi|222628902|gb|EEE61034.1| hypothetical protein OsJ_14872 [Oryza sativa Japonica Group]
Length = 2486
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 113/237 (47%), Gaps = 54/237 (22%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + P +K CL+++ + + + GIIY
Sbjct: 1933 IIFRQSFNRPNLRYFVW----------------PKTKK-CLEDIHNFIHANHNKECGIIY 1975
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
S +CE + +LR G S YH ++ ++AFG+GI+K
Sbjct: 1976 CLSRMDCEKVAAKLREYGHTASHYHGSMDPEDRANIQKQWSKDRINIICATVAFGMGINK 2035
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---FDQQ--- 178
P+VRFVIHH L KS+E ++QE GRAGRD Q++ C+L+Y D +L MV F +Q
Sbjct: 2036 PDVRFVIHHSLPKSIEGYHQECGRAGRDSQLSTCVLFYNYSDYIRLKHMVTQGFAEQGTS 2095
Query: 179 -------------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
T NL +VSYC + CRR + +F E ++ + C CD+C
Sbjct: 2096 APRGGSSQEQALETHKENLLRMVSYCENDVDCRRLLQLIHFGEMFNPSCCAKTCDNC 2152
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 2025 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 2055
>gi|404485707|ref|ZP_11020904.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
gi|404338395|gb|EJZ64842.1| ATP-dependent DNA helicase RecQ [Barnesiella intestinihominis YIT
11860]
Length = 726
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 74/209 (35%), Positives = 110/209 (52%), Gaps = 31/209 (14%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + + +SGIIY S K+ E+L E L+ G+R YH
Sbjct: 211 YYEVRPKTANIDKDIIKYI-----KSQEGKSGIIYCLSRKKVEELAELLQVNGIRALPYH 265
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 266 AGMDSATRTQNQDAFLLEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 325
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL + +Q+ G L +Y + + CRR I+
Sbjct: 326 GRDGGEGQCITFYINKDLQKLEKFMQGKPIAEQEIGKQLLLETAAYA-ESSLCRRKILLH 384
Query: 205 YFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
YF E + + C G CD+C ++ + D
Sbjct: 385 YFGEEYEEDNC-GNCDNCLNPKKQVEAKD 412
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L + +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 282 LEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|387592527|gb|EIJ87551.1| hypothetical protein NEQG_02098 [Nematocida parisii ERTm3]
gi|387595153|gb|EIJ92778.1| hypothetical protein NEPG_02177 [Nematocida parisii ERTm1]
Length = 861
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 75/229 (32%), Positives = 117/229 (51%), Gaps = 46/229 (20%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F ++PN+++ R+ P K+ + E+ + + SGIIY
Sbjct: 527 FTQSFNRPNLKY----------------RVIPKT-KNQIAEIVSFIETHYPEDSGIIYCL 569
Query: 85 SIKECEDLREEL-RNRGLRVSAYHAKLESN------------------VSIAFGLGIDKP 125
S ++CE L E L ++ G+R YHA L + +IAFG+GIDK
Sbjct: 570 SKRDCEWLAETLQKDHGIRAGYYHAGLSTKERTERAREWDSSHIRVIVATIAFGMGIDKK 629
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA--- 182
+VR+V+H+ L KS+E +YQE+GRAGRD + C+LYY D K+ M+ ++ A
Sbjct: 630 DVRYVLHYSLPKSLEGYYQETGRAGRDQLNSECVLYYTYSDKKKIDYMIDRNESASAEAK 689
Query: 183 -----NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC-RGG 225
+L ++SYC ++T CRR ++ YF E ++ C CD+C RGG
Sbjct: 690 SRQRRHLQEVISYCENKTDCRRHLLLHYFGETFNKF-CGDGCDNCQRGG 737
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W +S +V +IAFG+GIDK +VR+V+H+ L KS+E +YQ
Sbjct: 608 WDSSHIRVIVATIAFGMGIDKKDVRYVLHYSLPKSLEGYYQ 648
>gi|224540740|ref|ZP_03681279.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
gi|224517639|gb|EEF86744.1| hypothetical protein BACCELL_05654 [Bacteroides cellulosilyticus
DSM 14838]
Length = 602
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 82/215 (38%), Positives = 114/215 (53%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS +++ YQ + K A D +D R R +SGIIY S +
Sbjct: 196 DRPN--------LSLTVKRGYQQKEKSKAILDFID--------RHRGESGIIYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ +GLRV+ YHA L S +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKQGLRVAVYHAGLSSARRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + +L+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTKFATESGQQGINLEKLQRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF EA ++ +C G CD C+
Sbjct: 360 QYA-EADVCRRRILLSYFGEATTE-DC-GNCDVCK 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|357155794|ref|XP_003577240.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Brachypodium
distachyon]
Length = 599
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 69/188 (36%), Positives = 103/188 (54%), Gaps = 30/188 (15%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN---------- 113
+L +L+ RF N SGI+Y S EC D + LR + ++ + YHA L +
Sbjct: 407 QLGELLKERFMNMSGIVYCLSKNECADTAKFLREKYKIKCAHYHAGLAARQRTSVQEKWH 466
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH+ LSKS+E++YQESGRAGRD AHC++ Y+
Sbjct: 467 RGEVKVICATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDDLPAHCVVLYQKK 526
Query: 166 DVFKLSSMV-----FDQQT---GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR- 216
D ++ M+ F +T + + +YC +T CRR + ++F E + C+
Sbjct: 527 DFSRIVCMLRNGDNFKSETFKVAMDQAKKMQAYCELKTECRRQTLLAHFGEQYDRQRCKD 586
Query: 217 --GMCDHC 222
CD+C
Sbjct: 587 GPSPCDNC 594
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 29/31 (93%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ LSKS+E++YQ
Sbjct: 475 ATIAFGMGIDKPDVRFVIHNTLSKSIESYYQ 505
>gi|429753766|ref|ZP_19286544.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
gi|429171815|gb|EKY13407.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 326
str. F0382]
Length = 729
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 384 ILHYFGEEFDEVNGEGANMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|420158748|ref|ZP_14665562.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
gi|394763235|gb|EJF45355.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea str. Holt
25]
Length = 727
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 211 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 262
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 263 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 322
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 323 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 381
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 382 ILHYFGEEFDEVNGEGANMDDNVR 405
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 320
>gi|420149707|ref|ZP_14656877.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
gi|394753188|gb|EJF36768.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 335
str. F0486]
Length = 732
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 216 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 267
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 268 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 327
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 328 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 386
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 387 ILHYFGEEFDEVNGEGANMDDNVR 410
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 296 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 325
>gi|393779596|ref|ZP_10367834.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
gi|392609916|gb|EIW92711.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 412
str. F0487]
Length = 727
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 211 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 262
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 263 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 322
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 323 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 381
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 382 ILHYFGEEFDEVNGEGANMDDNVR 405
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 320
>gi|332882718|ref|ZP_08450329.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|332679220|gb|EGJ52206.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
Length = 729
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNTKKSGIIYCLSRKKVEDLAQTLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 384 ILHYFGEEFDEVNGEGANMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|315223920|ref|ZP_07865765.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
gi|314946092|gb|EFS98096.1| ATP-dependent helicase RecQ [Capnocytophaga ochracea F0287]
Length = 729
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 384 ILHYFGEEFDEVNGEGANMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|256820777|ref|YP_003142056.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429746398|ref|ZP_19279750.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429756068|ref|ZP_19288682.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
gi|256582360|gb|ACU93495.1| ATP-dependent DNA helicase RecQ [Capnocytophaga ochracea DSM 7271]
gi|429166284|gb|EKY08277.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 380
str. F0488]
gi|429172170|gb|EKY13749.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 324
str. F0483]
Length = 729
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 384 ILHYFGEEFDEVNGEGANMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|213962479|ref|ZP_03390741.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
gi|213954805|gb|EEB66125.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sputigena Capno]
Length = 727
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ EDL + L+ G+
Sbjct: 211 YYEVRPKTKNVD------ADII--RFVKQNSKKSGIIYCLSRKKVEDLAQTLQVNGISAV 262
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 263 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 322
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 323 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 381
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 382 ILHYFGEEFDEVNGEGANMDDNVR 405
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 320
>gi|395213964|ref|ZP_10400385.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
gi|394456500|gb|EJF10790.1| ATP-dependent DNA helicase RecQ [Pontibacter sp. BAB1700]
Length = 726
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 108/197 (54%), Gaps = 31/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +K + + ++ + +SG+IY S K+ E++ E LR ++ YHA
Sbjct: 210 YYEVRPKHNTKKQVIQYV-----KKHKGKSGVIYCLSRKKVEEIAELLRVNDIKALPYHA 264
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+SN+ +IAFG+GIDKP+VRFVIH+ KS+E +YQE+GRAG
Sbjct: 265 GLDSNIRMANQDAFLNEEADVIVATIAFGMGIDKPDVRFVIHYDTPKSIEGYYQETGRAG 324
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLAN-----LYNIVSYCLDQTRCRRAIIASY 205
RDG +CI++Y D+ KL D+ + L + +Y D CRR + Y
Sbjct: 325 RDGLEGNCIMFYSYDDIIKLEKFNKDKPVTERDNSKLLLQEMAAYA-DSAVCRRKQLLHY 383
Query: 206 FDEAWSDTECRGMCDHC 222
F EA+ + +C G CD+C
Sbjct: 384 FGEAY-EKDC-GFCDNC 398
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ KS+E +YQ
Sbjct: 289 TIAFGMGIDKPDVRFVIHYDTPKSIEGYYQ 318
>gi|282860206|ref|ZP_06269280.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|424899672|ref|ZP_18323214.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
gi|282587027|gb|EFB92258.1| ATP-dependent DNA helicase RecQ [Prevotella bivia JCVIHMP010]
gi|388591872|gb|EIM32111.1| ATP-dependent DNA helicase RecQ [Prevotella bivia DSM 20514]
Length = 727
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 107/198 (54%), Gaps = 27/198 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P +D ++ ++ +SGIIY S K+ E+L L ++ + YHA
Sbjct: 211 YYEVR--PKKSEDDTNKQIIRFIKQHTGKSGIIYCLSRKKVEELAAVLLANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S V +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSEVRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ C+++Y D+ KL + +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICLVFYSRNDLKKLEKFMEGKPIAEQDIGRQLLQETEAYA-ESSVCRRKLLLHY 387
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + C GMCD+CR
Sbjct: 388 FGEEYPKENC-GMCDNCR 404
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|387132182|ref|YP_006298154.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
gi|386375030|gb|AFJ09244.1| ATP-dependent DNA helicase RecQ [Prevotella intermedia 17]
Length = 727
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++D ++ + + +SGIIY S K+ E+L L+ ++ YHA
Sbjct: 211 YYEVRPK-KNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQANEIKAEPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL + V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGKCIVFYSKNDLKKLENFMEGKPVAEQDIGRQLLQETETYA-ESSVCRRKLLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 388 FGEEYPKDNC-GMCDNC 403
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|395801803|ref|ZP_10481058.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395435992|gb|EJG01931.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 731
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 30/210 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + ++ + +SGIIY S K+ E + E L+ G+ YHA
Sbjct: 212 YYEVRTK---TKNIESDIIRFI-KQHKGKSGIIYCLSRKKVESIAEVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY DV KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQEIGFALLQEVVAYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
F E + G M D+ R + + D
Sbjct: 387 FGEEFDSETGEGADMDDNVRNPKHKVEAKD 416
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|313677434|ref|YP_004055430.1| ATP-dependent DNA helicase recQ [Marivirga tractuosa DSM 4126]
gi|312944132|gb|ADR23322.1| ATP-dependent DNA helicase RecQ [Marivirga tractuosa DSM 4126]
Length = 725
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 75/207 (36%), Positives = 111/207 (53%), Gaps = 33/207 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A+K +L ++ R + + G+IY S K+ E++ E L G + YHA
Sbjct: 210 YYEVRPKNQAKK----QLIRFLNER-KGKCGVIYCLSRKKVEEIAEFLNVNGFNAAPYHA 264
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE +IAFG+GIDKP+VRFVIH+ KS+E +YQE+GRAG
Sbjct: 265 GLEGATRMKNQDDFLNEDVDIIVATIAFGMGIDKPDVRFVIHYDTPKSVEGYYQETGRAG 324
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG + C+++Y D+ KL V +++ L + SY + + CRR + Y
Sbjct: 325 RDGLVGDCLMFYSYNDILKLEKFNKDKPVTEKENAKLLLEEMSSYA-ESSVCRRKQLLHY 383
Query: 206 FDEAWSDTECRGMCDHCRGGRR--DAK 230
F E ++D C G CD+CR + DAK
Sbjct: 384 FGEEFADY-C-GKCDNCRHPKEKFDAK 408
>gi|429327654|gb|AFZ79414.1| ATP-dependent DNA helicase, RecQ family member protein [Babesia
equi]
Length = 809
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 70/201 (34%), Positives = 107/201 (53%), Gaps = 29/201 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR------------ 97
Y+V K K ++ L +L++ RF +Q GI+Y S +E ED+ L
Sbjct: 369 YEVIKKDKQSKRAVNGLIELITNRFMDQCGIVYCLSCREAEDVANALSSHVTSCYYHAQI 428
Query: 98 NRGLRVSAYHAKLESNVSI-----AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
N R YH +E V++ AFG+GIDKP+VRFVIH + KS+EN++QESGRAGRD
Sbjct: 429 NMVTRNRIYHDWIEGRVNVIVATLAFGMGIDKPDVRFVIHFSMPKSLENYFQESGRAGRD 488
Query: 153 GQIAHCILYYRLPDVFKLSSMV-----------FDQQTGLANLYNIVSYCLDQTRCRRAI 201
G+++ C+L Y D +L ++ Q + ++V+YC D CRR +
Sbjct: 489 GKLSVCVLLYEFHDSQRLLTLTQGVSAQGSQESEQQMVNRKQILSMVNYCEDNITCRRIL 548
Query: 202 IASYFDEAWSDTECRGMCDHC 222
+ YF + + + +C CD+C
Sbjct: 549 LLKYFGQDF-NAKCDVPCDNC 568
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 29/37 (78%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R + ++AFG+GIDKP+VRFVIH + KS+EN++Q
Sbjct: 444 RVNVIVATLAFGMGIDKPDVRFVIHFSMPKSLENYFQ 480
>gi|361131758|gb|EHL03410.1| putative ATP-dependent DNA helicase hus2/rqh1 [Glarea lozoyensis
74030]
Length = 855
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/144 (42%), Positives = 88/144 (61%), Gaps = 20/144 (13%)
Query: 49 FYQVRIKPA--AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K ++ L +++L+ + ++N SGIIYT S K CEDL E+LR +G+R +
Sbjct: 330 YYEVRTKKGKGVSEEVLKNMSELILKDYKNMSGIIYTLSRKGCEDLAEKLREKGIRAHHF 389
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA +++ +IAFG+GIDK +VRFVIHH + KS+E +YQE+GR
Sbjct: 390 HASMDAVEKHQVQRDWQAGKHQVVVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQETGR 449
Query: 149 AGRDGQIAHCILYYRLPDVFKLSS 172
AGRDG+ + C LYY D L S
Sbjct: 450 AGRDGKPSGCYLYYGYQDTAVLRS 473
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ +QV +IAFG+GIDK +VRFVIHH + KS+E +YQ
Sbjct: 405 WQAGKHQVVVATIAFGMGIDKADVRFVIHHTMPKSLEGYYQ 445
>gi|325187369|emb|CCA21907.1| bloom syndrome protein putative [Albugo laibachii Nc14]
Length = 590
Score = 120 bits (300), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 122/270 (45%), Gaps = 59/270 (21%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN--------------FYQVRIKP 56
L + +T+F + I L + V+ H L N ++V KP
Sbjct: 319 LGVLKTAFPSIPI---LALTATAAENVVRHVLKSLHINDALVLRTGFNRSNLLFEVHEKP 375
Query: 57 AAQKDCLDELADLMSRRF--------------RNQSGIIYTTSIKECEDLREELRNRGLR 102
+ + L L++ RF SGI+Y + ECED+ L + G+
Sbjct: 376 SGDIEARKHLLALLTCRFGYRKATWTEDSFSSEGPSGIVYCMTRDECEDVANFLFDHGIS 435
Query: 103 VSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
YH +IA+G+GI+K +VRFVIH+ L+KS+E +YQ
Sbjct: 436 ADFYHGGQSKTDRQLVQQAWQRGHVRIVCATIAYGMGINKADVRFVIHYSLAKSIEGYYQ 495
Query: 145 ESGRAGRDGQIAHCILY------YRLPDVFKLSSMVFDQQT---GLANLYNIVSYCLDQT 195
E+GRAGRD Q +HCI+ YRL + + +QT L NL +V YC D+T
Sbjct: 496 EAGRAGRDSQPSHCIVLFNDNDGYRLRRILSIPQKNMTRQTRALHLKNLKEVVLYCQDKT 555
Query: 196 RCRRAIIASYF-DEAWSDTECRGMCDHCRG 224
RCRR + YF E + +C+ CD+C+G
Sbjct: 556 RCRRQYLVEYFGGEKFPREQCKRTCDNCQG 585
>gi|119943986|ref|YP_941666.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
gi|119862590|gb|ABM02067.1| ATP-dependent DNA helicase RecQ [Psychromonas ingrahamii 37]
Length = 602
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 72/184 (39%), Positives = 107/184 (58%), Gaps = 28/184 (15%)
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------- 113
L++LA+ + +N+SGIIY TS + E+L E+LR +GL V YHA +
Sbjct: 220 LNQLANYLDEH-KNESGIIYCTSRRRTEELAEKLRVKGLSVRCYHAGMMIEERQSVQDLF 278
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
++AFG+GIDKPNVRFV+H+ + K++E++YQE+GRAGRDG A +L+Y
Sbjct: 279 IKDKVDIVVATVAFGMGIDKPNVRFVVHYEIPKNIESYYQETGRAGRDGLPAQAMLFYDP 338
Query: 165 PDVFKLSSMVF------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM 218
D ++ SM+ Q+ L L +V++ QT CRR ++ +YF E +S C G
Sbjct: 339 ADAGRVRSMLEKNTNEQQQRIELHKLNTMVAFAEAQT-CRRQVLLNYFGE-YSHKSC-GN 395
Query: 219 CDHC 222
CD C
Sbjct: 396 CDVC 399
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKPNVRFV+H+ + K++E++YQ
Sbjct: 289 TVAFGMGIDKPNVRFVVHYEIPKNIESYYQ 318
>gi|371777407|ref|ZP_09483729.1| ATP-dependent DNA helicase [Anaerophaga sp. HS1]
Length = 726
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 30/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A ++ + L D + S IIY S K+ E+L E L G++ AYHA
Sbjct: 211 YYEVRPKVNATREIIKILKDNPGK-----SAIIYCLSRKKVEELAETLVVNGIKALAYHA 265
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR VIH+ + KS+E +YQE+GRAG
Sbjct: 266 GMDAATRSKNQDKFLMEEIDVIVATIAFGMGIDKPDVRMVIHYDIPKSLEGYYQETGRAG 325
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL + +Q+ G L V+Y + + CRR + Y
Sbjct: 326 RDGGEGKCIAFYSYKDIQKLEKFMQGKPLAEQEIGKQLLLETVAYA-ESSLCRRKTLLHY 384
Query: 206 FDEAWSDTECRGMCDHC 222
F E++++ C G CD+C
Sbjct: 385 FGESYTEENC-GACDNC 400
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR VIH+ + KS+E +YQ
Sbjct: 290 TIAFGMGIDKPDVRMVIHYDIPKSLEGYYQ 319
>gi|374629362|ref|ZP_09701747.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
gi|373907475|gb|EHQ35579.1| ATP-dependent DNA helicase, RecQ family [Methanoplanus limicola DSM
2279]
Length = 1165
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 66/200 (33%), Positives = 111/200 (55%), Gaps = 33/200 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y V+ K A++ L L + GIIY S K E++ LRN G +HA
Sbjct: 215 YYYVKEKKKAKEQILQYLNE-----NHGSCGIIYCLSRKTTEEIAGFLRNNGFNAKPFHA 269
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +V ++AFG+G+DKP++RFVIH+ K +E++YQE+GRAG
Sbjct: 270 NLQEDVKRETQEEFLYGKTPIICSTVAFGMGVDKPDIRFVIHYDPPKDLESYYQETGRAG 329
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRAII 202
RD + + CI +Y L D K+ +MV+++ +G + + +++++C + ++CRR +
Sbjct: 330 RDRENSDCIFFYSLGDFSKIRNMVYEENSGNSGRRSIAMKRINDLINFC-ETSQCRRKYL 388
Query: 203 ASYFDEAWSDTECRGMCDHC 222
SYF E +++ C G CD+C
Sbjct: 389 LSYFGEDYNEEPCPG-CDNC 407
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+T ++AFG+G+DKP++RFVIH+ K +E++YQ
Sbjct: 287 KTPIICSTVAFGMGVDKPDIRFVIHYDPPKDLESYYQ 323
>gi|336476813|ref|YP_004615954.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
gi|335930194|gb|AEH60735.1| ATP-dependent DNA helicase RecQ [Methanosalsum zhilinae DSM 4017]
Length = 611
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 107/198 (54%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY V+ K KD +L + ++ R +SGIIY S E L + L G + AYHA
Sbjct: 202 FYHVKTK----KDTYRQLKAYL-KKHRGESGIIYCQSRSMVETLSKRLNKDGFKTLAYHA 256
Query: 109 KL-----ESN-------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L E N ++AFG+GIDKP+VRFVIH+ L K++E++YQE+GR G
Sbjct: 257 GLSDFKREYNQNSFIQDNTDIIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQETGRGG 316
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQT------GLANLYNIVSYCLDQTRCRRAIIAS 204
RDG C+L++ D +K+ + ++T L L +++YC + +CRR ++
Sbjct: 317 RDGLPCECVLFFSYADKYKIEYFIEQKKTKEERDAALMQLRQMINYC-ESNQCRRKVLLE 375
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + ++ C+ CD C
Sbjct: 376 YFGETYPESNCK-KCDVC 392
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 29/36 (80%)
Query: 16 TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
T ++AFG+GIDKP+VRFVIH+ L K++E++YQ
Sbjct: 275 TDIIVATVAFGMGIDKPDVRFVIHYDLPKNLESYYQ 310
>gi|118489987|gb|ABK96790.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 617
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 103/193 (53%), Gaps = 30/193 (15%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN----- 113
K+ L +L DL+ RF+NQ GI+Y S EC ++ + L + ++ YHA L +
Sbjct: 420 KESLKQLGDLLRDRFKNQCGIVYCLSKNECVEVSKFLNEKCKIKAVYYHAGLGARQRVDV 479
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VRFVIH+ LSKS+E++YQESGRAGRD A CI
Sbjct: 480 QRKWHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQESGRAGRDSHPATCIA 539
Query: 161 YYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
Y+ D ++ M+ Q +A + SYC + CRR ++ +F E++
Sbjct: 540 LYQKKDFSRVVCMLRSGQGYKRESFKPAMAQAQKMKSYCELKAECRRQVLLEHFGESFDQ 599
Query: 213 TECR---GMCDHC 222
C+ CD+C
Sbjct: 600 KACKFGSHPCDNC 612
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T + +IAFG+GIDKP+VRFVIH+ LSKS+E++YQ
Sbjct: 483 WHTGEVHIVCATIAFGMGIDKPDVRFVIHNTLSKSIESYYQ 523
>gi|317475725|ref|ZP_07934984.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
gi|316908108|gb|EFV29803.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii 1_2_48FAA]
Length = 727
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDKDIIKFI-----KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLH 385
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + + C G CD+C
Sbjct: 386 YFGEEYMEENC-GNCDNC 402
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|218128449|ref|ZP_03457253.1| hypothetical protein BACEGG_00017 [Bacteroides eggerthii DSM 20697]
gi|217989340|gb|EEC55653.1| ATP-dependent DNA helicase RecQ [Bacteroides eggerthii DSM 20697]
Length = 727
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 73/198 (36%), Positives = 105/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A KD + + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDKDIIKFI-----KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLH 385
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + + C G CD+C
Sbjct: 386 YFGEEYMEENC-GNCDNC 402
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|71402467|ref|XP_804144.1| ATP-dependent DEAD/H DNA helicase recQ [Trypanosoma cruzi strain CL
Brener]
gi|70866957|gb|EAN82293.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma
cruzi]
Length = 1310
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 27/190 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------- 113
+ DL+ RF +S GI+Y S K+CE++ EL G+R S YHA+
Sbjct: 597 VVDLIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEASGKNEKQERWTKDE 656
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
+IAFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG + CIL D
Sbjct: 657 IQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCSPSDKQ 716
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-------GM 218
+ M++ D +T +++LY +++Y ++ CRR YF E + C
Sbjct: 717 RHEQMIYGSNDWKTSMSSLYRMLAYTINDVHCRRMQQLGYFGEDMDEHYCLKQPEGSVAT 776
Query: 219 CDHCRGGRRD 228
CD+C R +
Sbjct: 777 CDNCASKRSE 786
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 652 WTKDEIQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 692
>gi|407425855|gb|EKF39533.1| ATP-dependent DEAD/H DNA helicase recQ, putative [Trypanosoma cruzi
marinkellei]
Length = 1364
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 27/190 (14%)
Query: 66 LADLMSRRFRNQS-GIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------- 113
+ DL+ RF +S GI+Y S K+CE++ EL G+R S YHA+
Sbjct: 597 VVDLIKHRFPPRSCGIVYCLSRKDCENMAAELVGAGIRASYYHAEASGKNEKQERWTKDE 656
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
+IAFG+GI+KP+VRFVIH + KS+E +YQESGRAGRDG + CIL D
Sbjct: 657 LQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLPSECILLCSPSDKQ 716
Query: 169 KLSSMVF---DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-------GM 218
+ M++ D +T +++LY +++Y ++ CRR YF E + C
Sbjct: 717 RHEQMIYGSNDWKTSMSSLYRMLAYTMNDVHCRRMQQLGYFGEDMDEHYCLKQPEGSVAT 776
Query: 219 CDHCRGGRRD 228
CD+C R +
Sbjct: 777 CDNCASKRSE 786
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 652 WTKDELQVICATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 692
>gi|189462225|ref|ZP_03011010.1| hypothetical protein BACCOP_02908 [Bacteroides coprocola DSM 17136]
gi|189431078|gb|EDV00063.1| ATP-dependent DNA helicase RecQ [Bacteroides coprocola DSM 17136]
Length = 727
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 25/180 (13%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G++ YHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEELAEILQANGIKARPYHAGMDSATRNANQDAFLKEDIEVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGMCITFYSNKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
+ +Q+ G L +Y + + CRR I+ YF E +++ C G CD+C ++ + D
Sbjct: 355 ISEQEIGKQLLLETAAYA-ESSLCRRKILLHYFGEEYTEDNC-GNCDNCLNPKKQVEAQD 412
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|445120845|ref|ZP_21379373.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
gi|444839226|gb|ELX66305.1| RecQ family ATP-dependent DNA helicase, partial [Prevotella
nigrescens F0103]
Length = 594
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++D ++ + + +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 78 YYEVRPK-KNEEDTNRQIIKFIKQNL-GKSGIIYCLSRKKVEELAAVLQANDIKAAPYHA 135
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 136 GLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 195
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL + V +Q G L +Y + + CRR ++ Y
Sbjct: 196 RDGEEGKCIVFYSKNDLKKLENFMEGKPVAEQDIGRQLLQETETYA-ESSVCRRKLLLHY 254
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 255 FGEEYTKDNC-GMCDNC 270
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 160 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 189
>gi|308462738|ref|XP_003093650.1| CRE-HIM-6 protein [Caenorhabditis remanei]
gi|308249588|gb|EFO93540.1| CRE-HIM-6 protein [Caenorhabditis remanei]
Length = 1039
Score = 119 bits (299), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 48/224 (21%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSI-------------------KECEDLREEL 96
P A K ++ + + M + + +SGI+Y S KECE ++ L
Sbjct: 484 PKAAKSLIN-VVEKMKQLYPGKSGIVYCLSRYKILQKKRQKIYLTLAFFRKECETVQMML 542
Query: 97 RNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKS 138
GL YHA L + +IAFG+GIDKP+VRFVIH+ L KS
Sbjct: 543 TKAGLSAEVYHAGLNDGLRVSVQKGWLANKFDVICATIAFGMGIDKPDVRFVIHYSLPKS 602
Query: 139 MENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LANLYNIVSYC 191
+E +YQE+GRAGRDG ++C++ Y D +L M+ + T L N+ +V+YC
Sbjct: 603 IEGYYQETGRAGRDGMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVRSMHLNNVLQVVAYC 662
Query: 192 LDQTRCRRAIIASYFDEAWSDTECRG---MCDHCRGGRRDAKRV 232
+ + CRR ++ +F E + + CR CD C R++ + +
Sbjct: 663 ENVSVCRRKMLVEHFGEVYDEQSCRNSKTPCDVCERQRKNPEAI 706
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct: 578 ATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 608
>gi|146298045|ref|YP_001192636.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146152463|gb|ABQ03317.1| ATP-dependent DNA helicase, RecQ family [Flavobacterium johnsoniae
UW101]
Length = 731
Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 73/202 (36%), Positives = 108/202 (53%), Gaps = 34/202 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K + + +D++ ++ + +SGIIY S K+ E + E L+ G+ Y
Sbjct: 212 YYEVRTKTKSIE------SDIIRFIKQHKGKSGIIYCLSRKKVESIAEVLQVNGISAVPY 265
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 266 HAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGR 325
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ YY DV KL V +Q+ G A L +V+Y + + RR +
Sbjct: 326 AGRDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQEIGFALLQEVVAYA-ETSMSRRKFLL 384
Query: 204 SYFDEAWSDTECRG--MCDHCR 223
YF E + G M D+ R
Sbjct: 385 HYFGEEFDSETGEGADMDDNVR 406
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|434389644|ref|YP_007100255.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
gi|428020634|gb|AFY96728.1| ATP-dependent DNA helicase RecQ [Chamaesiphon minutus PCC 6605]
Length = 743
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 83/249 (33%), Positives = 128/249 (51%), Gaps = 50/249 (20%)
Query: 8 IAYLNLWRTSFYQV--SIAFGLGIDKPNVRFVIHHCLSKSMEN-FYQVRIKPAAQKDCLD 64
+ +L L T+ +V I L + +P+V H S + N +Y+VR K A L
Sbjct: 177 VPWLGLTATATDRVRSDIINQLELREPHV-----HIASFNRPNLYYEVRRKTTAPYKEL- 230
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------- 114
L + SGIIY S K+ ++L +L+ G++V YHA L+
Sbjct: 231 ----LAQVKQSEGSGIIYCLSRKKVDELTTKLKQDGIKVVPYHAGLDGETRTKNQNSFIR 286
Query: 115 --------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD 166
++AFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ AHC LY+ + D
Sbjct: 287 DDVKVIVATVAFGMGINKPDVRFVIHYDLPRNIEGYYQESGRAGRDGEPAHCTLYFGMGD 346
Query: 167 VFKLSSMV---FDQQTGLA----------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
+ + ++ D +TG+A L +++Y + T CRR I YF E++
Sbjct: 347 IKTIEYLIAQKVDPETGMALEDEQRIATQQLRRVINYA-EATECRRIIQLGYFGESFP-- 403
Query: 214 ECRGMCDHC 222
G CD+C
Sbjct: 404 ---GNCDNC 409
>gi|399026913|ref|ZP_10728551.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398075677|gb|EJL66783.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 731
Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats.
Identities = 73/200 (36%), Positives = 107/200 (53%), Gaps = 30/200 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + ++ + +SGIIY S K+ E + E L+ G+ YHA
Sbjct: 212 YYEVRTK---TKNIESDIIRFI-KQHKGKSGIIYCLSRKKVETIAEVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY DV KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQEIGFALLQEVVAYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRG--MCDHCR 223
F E + G M D+ R
Sbjct: 387 FGEEFDSENGEGADMDDNVR 406
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|56603560|dbj|BAD80740.1| DNA helicase [Lentinula edodes]
Length = 945
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 32/193 (16%)
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN--------- 113
LD++ ++ + R ++GIIY +CE + +LR +GL+ +HA++ +
Sbjct: 607 LDDIYSFINTKHRGETGIIYCLGRDKCEKVAGQLRQKGLKARHFHAQMSTTDKEQVLQEW 666
Query: 114 ---------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
++AFG+GIDK NVRFVIHH L KS++ +YQE+GRAGRD + A C+L+Y
Sbjct: 667 QSDRIQIVVATVAFGMGIDKANVRFVIHHDLPKSLDGYYQETGRAGRDQKPADCLLFYSY 726
Query: 165 PDVFKLSSMVFDQQTG----LANLYN----------IVSYCLDQTRCRRAIIASYFDEAW 210
D + M+ + + G LA+ ++ YCL+ + CRR + +F E +
Sbjct: 727 RDYKVIVKMINNPRNGDSSELASPEARERQELQARIVMQYCLNVSDCRRVQLLQFFGEKF 786
Query: 211 SDTECRGMCDHCR 223
C CD+CR
Sbjct: 787 ERRNCHQFCDNCR 799
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/44 (52%), Positives = 32/44 (72%), Gaps = 3/44 (6%)
Query: 11 LNLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L W++ Q+ ++AFG+GIDK NVRFVIHH L KS++ +YQ
Sbjct: 663 LQEWQSDRIQIVVATVAFGMGIDKANVRFVIHHDLPKSLDGYYQ 706
>gi|381188984|ref|ZP_09896542.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379649120|gb|EIA07697.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 704
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 107/193 (55%), Gaps = 27/193 (13%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++PA D + ++ D +S + R +SGI+Y S K E+L E+L+ G+ AYHA L+
Sbjct: 207 LEVRPAL--DRVKQIVDFISAKPR-ESGIVYCLSRKTTEELAEKLQKAGINAKAYHAGLD 263
Query: 112 SNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
S V +IAFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 264 STVRSKTQDDFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 323
Query: 154 QIAHCILYYRLPDVFKL---SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
+ IL+ DV +L +S + + LA L + Y D CRR I+ SYF E
Sbjct: 324 LPSETILFESYGDVIQLQKFASQGLNAEVQLAKLERMKQYA-DALSCRRKILLSYFGELV 382
Query: 211 SDTECRGMCDHCR 223
TE G CD C+
Sbjct: 383 --TENCGNCDICK 393
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 285 TIAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 314
>gi|356541884|ref|XP_003539402.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like [Glycine max]
Length = 1534
Score = 119 bits (299), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 120/241 (49%), Gaps = 58/241 (24%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I F ++PN+R+ + + K+ K CL+++ + ++ GI+Y
Sbjct: 968 IIFRQSFNRPNLRYSV---IPKT--------------KKCLEDIDKFIRENHFDECGIVY 1010
Query: 83 TTSIKECEDLREELRNRGLRVSAYH---------------AKLESNV---SIAFGLGIDK 124
S +CE + E+L+ G + + YH +K E N+ ++AFG+GI+K
Sbjct: 1011 CLSRMDCEKVAEKLQECGHKCAFYHGSMDPVQRASVQKQWSKDEINIICATVAFGMGINK 1070
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV----FDQ--- 177
P+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LYY D ++ M+ +Q
Sbjct: 1071 PDVRFVIHHSLPKSIEGYHQECGRAGRDGQHSSCVLYYTYSDYIRVKHMLSQGAIEQSSM 1130
Query: 178 ----------------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDH 221
+T NL +VSYC + CRR + ++F E ++ + C CD+
Sbjct: 1131 TSGYNRSNMINSGRILETNTENLVRMVSYCENDVDCRRLLQLAHFGEKFNSSTCLKTCDN 1190
Query: 222 C 222
C
Sbjct: 1191 C 1191
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 1060 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 1090
>gi|328866871|gb|EGG15254.1| ATP-dependent DNA helicase RecQ family protein [Dictyostelium
fasciculatum]
Length = 834
Score = 119 bits (298), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 121/253 (47%), Gaps = 41/253 (16%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L T + + I LGI + +V V ++ Y VR KPA+ ++
Sbjct: 548 IVALTATATDYVEHDIKNQLGISRDDVVNVRGTFQRNNLR--YAVRDKPASPIGVAMDIE 605
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
+ R+ SGI+Y + ECE+L LR+ GL Y+A L +
Sbjct: 606 SFIKARYPTSSGIVYCATSVECENLASHLRDVGLSAHHYYASLSTPTRLEIQDNWIKGKI 665
Query: 115 -----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY------R 163
+ AFG+GIDKP+ RFVIHH + +S+E++YQ +GRAGRDGQ++ ILY+ R
Sbjct: 666 KVICTTTAFGMGIDKPDTRFVIHHSMPQSIESYYQHTGRAGRDGQLSDSILYFSDIDKKR 725
Query: 164 LPDVFKLSSMVFDQQTGLAN-------------LYNIVSYCLDQTRCRRAIIASYF-DEA 209
+ + K ++ DQ ++N L ++VS D T CR + +YF D
Sbjct: 726 MEKLMKPTTSTQDQYENISNDKVGDIYERKLAALDSLVSLLKD-TGCRHQKLTNYFGDTK 784
Query: 210 WSDTECRGMCDHC 222
T C MCD+C
Sbjct: 785 NKPTSCGRMCDNC 797
>gi|344201636|ref|YP_004786779.1| RecQ familyATP-dependent DNA helicase [Muricauda ruestringensis DSM
13258]
gi|343953558|gb|AEM69357.1| ATP-dependent DNA helicase, RecQ family [Muricauda ruestringensis
DSM 13258]
Length = 733
Score = 119 bits (298), Expect = 9e-25, Method: Composition-based stats.
Identities = 79/202 (39%), Positives = 106/202 (52%), Gaps = 34/202 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ--SGIIYTTSIKECEDLREELRNRGLRVSAY 106
FY+VR K D AD++ +NQ SGIIY S K E+L + L+ G+ Y
Sbjct: 213 FYEVRPKTK------DVDADIIRFVKQNQGKSGIIYCLSRKRVEELAQVLQVNGVSAVPY 266
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA ++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 267 HAGFDAKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ YY DV KL V +Q+ G A L IV+Y + + RR I
Sbjct: 327 AGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAEQEIGNALLQEIVAYA-ETSMSRRKFIL 385
Query: 204 SYFDEAWSDTECRG--MCDHCR 223
YF E + + G M D+ R
Sbjct: 386 HYFGEDFDEENGEGADMDDNSR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|157278040|ref|NP_001098120.1| Bloom syndrome helicase [Oryzias latipes]
gi|140083401|gb|ABO84823.1| Bloom syndrome helicase [Oryzias latipes]
Length = 1393
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 63/180 (35%), Positives = 97/180 (53%), Gaps = 27/180 (15%)
Query: 56 PAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-- 113
P K ++ + + + SGI+Y S +C+ + E L+ G++ +YHA L
Sbjct: 847 PKKPKKVDEDCIGWIKKHYPRDSGIVYCLSRNDCDAMAESLKRAGIQALSYHAGLSDGDR 906
Query: 114 -----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIA 156
+IAFG+GIDKP+VR+VIH L KS+E +YQESGRAGRDG+I+
Sbjct: 907 EYVQSKWINQDGCQVICATIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEIS 966
Query: 157 HCILYYRLPDVFKLSSMV--------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
HCIL+Y DV ++ ++ + T NL+++V +C + CRR + +YF E
Sbjct: 967 HCILFYSYTDVHRIKRIISMDREGDSHTKATHFNNLHSMVHFCENVMECRRIQLLAYFGE 1026
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH L KS+E +YQ
Sbjct: 924 ATIAFGMGIDKPDVRYVIHASLPKSVEGYYQ 954
>gi|150003035|ref|YP_001297779.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212690531|ref|ZP_03298659.1| hypothetical protein BACDOR_00013 [Bacteroides dorei DSM 17855]
gi|237708012|ref|ZP_04538493.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|265754201|ref|ZP_06089390.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294775659|ref|ZP_06741167.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|319642190|ref|ZP_07996850.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|345515920|ref|ZP_08795417.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|345518199|ref|ZP_08797654.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|423229918|ref|ZP_17216323.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423241571|ref|ZP_17222683.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|423247008|ref|ZP_17228059.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|423314860|ref|ZP_17292792.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149931459|gb|ABR38157.1| ATP-dependent DNA helicase recQ [Bacteroides vulgatus ATCC 8482]
gi|212666880|gb|EEB27452.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229436550|gb|EEO46627.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|229457998|gb|EEO63719.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 9_1_42FAA]
gi|254836466|gb|EET16775.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|263234910|gb|EEZ20465.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|294450503|gb|EFG18995.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|317386176|gb|EFV67095.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 3_1_40A]
gi|392632709|gb|EIY26667.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|392633769|gb|EIY27707.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392641157|gb|EIY34942.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392681042|gb|EIY74404.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 726
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 98/180 (54%), Gaps = 25/180 (13%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEELAEVLQANGINARAYHAGMDSATRTANQDGFLKEDIDVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYSNKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
V +Q+ G L +Y + + CRR + YF E +++ C G CD+C ++ + D
Sbjct: 355 VAEQEIGKQLLLETAAYA-ESSICRRKSLLHYFGEEYTEENC-GNCDNCLNPKKQVEAQD 412
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|409079184|gb|EKM79546.1| hypothetical protein AGABI1DRAFT_128693 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 680
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 87/278 (31%), Positives = 124/278 (44%), Gaps = 53/278 (19%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRI-----KPAAQKDC 62
I L T Q I + L IDK +V + +H +++ FY+VR ++
Sbjct: 174 IMALTATATPVVQRDILYSLKIDKNDVFYAVHPFNRENL--FYEVRYMSLLDSQTRKQHI 231
Query: 63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------- 114
D + L RR R SGIIY + C+D+ + LR GL +YH+ + V
Sbjct: 232 FDYINLLHQRRKRPSSGIIYCRAKATCDDVSDFLRRNGLNAQSYHSGISQGVLKQTLKKW 291
Query: 115 ----------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC 158
++AFGLGIDK +VR+VIH+ L S E +YQE+GRAGRDGQ + C
Sbjct: 292 SAGGNGGQGTIDVVVATVAFGLGIDKDDVRYVIHYDLPTSFEGYYQETGRAGRDGQPSKC 351
Query: 159 ILYYRLPDVFKLSSMVF---------------DQQTGLANLYNIVSYCLDQTRCRRAIIA 203
ILYY D + V Q +++ ++ Y + CR I
Sbjct: 352 ILYYSREDALGIRERVTISKPNRINDGFQGPSPTQRAKSSIDELIQYAENVATCRHIGIC 411
Query: 204 SYF----DEAWSDTE---CRGMCDHCRGGRRDAKRVDV 234
YF DE+ DT C MCD C+ + KR+ V
Sbjct: 412 RYFGEDVDESKPDTVESLCDSMCDVCKYSVKTKKRITV 449
>gi|89889904|ref|ZP_01201415.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89518177|gb|EAS20833.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 719
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 100/172 (58%), Gaps = 24/172 (13%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------ 113
++++++SGIIY S K CE L ++L + G V+AYHA LE
Sbjct: 220 KKYQDESGIIYCLSRKSCEKLSDKLSSLGFSVAAYHAGLEHRFRESVQEQFIKDEIKIVC 279
Query: 114 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
+IAFG+GIDK NVRFVIH+ + K++E +YQE GRAGRDG AH +L++ DV +L +
Sbjct: 280 ATIAFGMGIDKSNVRFVIHYNMPKNIEGYYQEIGRAGRDGIDAHALLFHSYADVIQLRNF 339
Query: 174 VFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
D + +A L + + D CRR ++ SYF+E + + +C G CD C
Sbjct: 340 ASDSGNSEVQIAKLERMKQFA-DALTCRRRMLLSYFNE-YLENDC-GNCDVC 388
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFVIH+ + K++E +YQ
Sbjct: 281 TIAFGMGIDKSNVRFVIHYNMPKNIEGYYQ 310
>gi|255083412|ref|XP_002504692.1| predicted protein [Micromonas sp. RCC299]
gi|226519960|gb|ACO65950.1| predicted protein [Micromonas sp. RCC299]
Length = 531
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/219 (35%), Positives = 113/219 (51%), Gaps = 46/219 (21%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLM--------SRRFRN 76
F + +PN+R Y+V +KP+A+KD D L ++ + +
Sbjct: 208 FRTSVQRPNLR--------------YEVVLKPSAKKDSDDLLCRIVLGAMGPDATPKPNC 253
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------------VSIA 117
+ I+Y S +E E E L N G+ YHA ++A
Sbjct: 254 GAAIVYCFSQREAEQCAEVLTNGGITSLPYHAGYTEESRRAVHTRWSRGDSVRVMCATVA 313
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV-FD 176
FG+G++KP+VR V+HH +SKS+E++YQESGRAGRDG+ A C++ +R DV + SSMV FD
Sbjct: 314 FGMGVNKPDVRLVVHHTVSKSVESYYQESGRAGRDGKRARCVVMWRPADVPRQSSMVAFD 373
Query: 177 QQTGLANLYNIVSYC--LDQTRCRRAIIASYFDEAWSDT 213
G NL N+ C L T CRRA +A++F E +T
Sbjct: 374 --AGSENLGNLYRSCRWLTSTGCRRASLAAHFGETTRET 410
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+G++KP+VR V+HH +SKS+E++YQ
Sbjct: 311 TVAFGMGVNKPDVRLVVHHTVSKSVESYYQ 340
>gi|255579679|ref|XP_002530679.1| DNA helicase hus2, putative [Ricinus communis]
gi|223529772|gb|EEF31710.1| DNA helicase hus2, putative [Ricinus communis]
Length = 1233
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/204 (31%), Positives = 100/204 (49%), Gaps = 41/204 (20%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CLD++ + ++ GIIY S +CE + E+L+ G + + YH +++
Sbjct: 663 KKCLDDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKAAFYHGNMDAAQRAFVQ 722
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDG + C+LY
Sbjct: 723 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLY 782
Query: 162 YRLPDVFKLSSMVFDQQ-----------------------TGLANLYNIVSYCLDQTRCR 198
Y D ++ M+ Q NL +VSYC + CR
Sbjct: 783 YSYSDYIRVKHMIVQGQIEQSPWTPGYNRINNTNSDRILEKNTENLLRMVSYCENDVDCR 842
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R + +F E ++ C+ CD+C
Sbjct: 843 RILQLLHFGEKFNSGNCKKTCDNC 866
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 735 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 765
>gi|442772186|gb|AGC72851.1| ATP-dependent DNA helicase RecQ [uncultured bacterium A1Q1_fos_97]
Length = 607
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 70/195 (35%), Positives = 105/195 (53%), Gaps = 28/195 (14%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++P Q+ L ++ D + R+ Q+GIIYT S K ED+ ++L+ +G + AYHA L
Sbjct: 208 LEVRPGQQR--LQQIEDFI-RKHPKQAGIIYTLSRKATEDIADKLKQKGFKAEAYHAGLS 264
Query: 112 SN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ ++AFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 265 PDRRSKIQDHFINDNLHIICATVAFGMGIDKSNVRWVIHYNLPKNLEGYYQEIGRAGRDG 324
Query: 154 QIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSY-----CLDQTRCRRAIIASYFDE 208
A +L+Y DV L ++ + + N +V + CRR I+ +YF E
Sbjct: 325 AKADTLLFYSFADVSMLRDIIQNGENAAQNEIQLVKLERMQQYAESLACRRRILLAYFSE 384
Query: 209 AWSDTECRGMCDHCR 223
S+ C G CD CR
Sbjct: 385 NLSEN-C-GNCDICR 397
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 285 ATVAFGMGIDKSNVRWVIHYNLPKNLEGYYQ 315
>gi|332664724|ref|YP_004447512.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
gi|332333538|gb|AEE50639.1| ATP-dependent DNA helicase RecQ [Haliscomenobacter hydrossis DSM
1100]
Length = 732
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 108/198 (54%), Gaps = 27/198 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++ + ++ ++ + QSGIIY S K E++ + L+ ++ + YHA
Sbjct: 213 YYEVRPKGKPEQ-AVRQIIQVI-KGMPGQSGIIYVQSRKAAEEIAKVLQVNDIKAAPYHA 270
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIH + KS+EN+YQE+GRAG
Sbjct: 271 GLDAKTRTRTQDEFLMEDVDVIVATIAFGMGIDKPDVRFVIHFDMPKSIENYYQETGRAG 330
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQ-----QTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL + D+ + G + +++Y + T CRR + Y
Sbjct: 331 RDGLEGRCIAFYAYKDMLKLEKFLRDKPVAEREMGSQLMQEVMAYA-ETTACRRQFLLHY 389
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + C +CD+CR
Sbjct: 390 FGEEYDQANCT-LCDNCR 406
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH + KS+EN+YQ
Sbjct: 295 TIAFGMGIDKPDVRFVIHFDMPKSIENYYQ 324
>gi|408394183|gb|EKJ73417.1| hypothetical protein FPSE_06410 [Fusarium pseudograminearum CS3096]
Length = 482
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 94/180 (52%), Gaps = 28/180 (15%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
D ++ R N GIIYT S ECE L LR+ G+ +HA+L +V
Sbjct: 262 DQVNERVDNVPGIIYTISRDECESLAASLRSEGIGARPFHARLPKDVKEETLARWINNEV 321
Query: 115 -------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+ AFG+GIDK NVRFV+H + KS E +YQE+GRAGRDG ++C LYY D+
Sbjct: 322 GYDIIVATTAFGMGIDKDNVRFVVHWRIPKSFEGYYQEAGRAGRDGNASYCFLYYSREDL 381
Query: 168 FKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+++ ++ +Q L +L + YC D +CR A I YF E S +C CD
Sbjct: 382 ERVTRLIRSDSKEETNQIARLKSLQALAQYCEDTGKCRHAAICKYFGET-SIPDCDFACD 440
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H + KS E +YQ
Sbjct: 328 ATTAFGMGIDKDNVRFVVHWRIPKSFEGYYQ 358
>gi|307103815|gb|EFN52072.1| hypothetical protein CHLNCDRAFT_36987 [Chlorella variabilis]
Length = 589
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/234 (33%), Positives = 122/234 (52%), Gaps = 51/234 (21%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
+ F ++PN+R Y+VR K +K C+DE+A+L+ + F + GI+Y
Sbjct: 228 LVFKNSFNRPNLR--------------YEVRRK---KKGCVDEMAELILQNFLKKCGIVY 270
Query: 83 TTSIKECEDLREELRNR---GLRVSAYHAKLESN------------------VSIAFGLG 121
S ECE + ++L + + YHA L +IAFG+G
Sbjct: 271 CLSRAECERVADDLEAKLADAIYPLHYHASLLPEEREAVQAEWTNGDVPIIVATIAFGMG 330
Query: 122 IDKPNVRFVIHHCLSKSMENFYQES-GRAGRDGQIAHCILYYRLPDVFKLSSMV------ 174
I+K +VRFV+H+ L KS+E + Q S GRAGRDG+ A CILYY D K M+
Sbjct: 331 INKCDVRFVLHYSLPKSLEGYLQASGGRAGRDGRKASCILYYTYGDAAKSRHMIRTSAQE 390
Query: 175 ---FDQQ--TGLANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRGMCDHC 222
D+Q + + +L +V+YC +Q CRR ++ S+F E +++ +C G CD+C
Sbjct: 391 NNAPDEQIRSNMESLNAMVNYCEEQVECRRVLMLSHFGEGSFTRAQCNGTCDNC 444
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+K +VRFV+H+ L KS+E + Q
Sbjct: 324 TIAFGMGINKCDVRFVLHYSLPKSLEGYLQ 353
>gi|365122666|ref|ZP_09339566.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
gi|363642172|gb|EHL81539.1| ATP-dependent DNA helicase RecQ [Tannerella sp. 6_1_58FAA_CT1]
Length = 726
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 110/209 (52%), Gaps = 29/209 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P Q D + + S+ +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVR--PKTQNIDRDIIKYIKSQS--GKSGIIYCLSRKKVEELAETLKVNGINALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSATRTQNQDAFLLEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL + +Q+ G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGQCITFYINKDLQKLEKFMQGKPIAEQEIGKQLLLETAAYA-ESSVCRRKLLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
F E + + C G CD+C ++ + D+
Sbjct: 386 FGEEYGEENC-GNCDNCLNPKKQVEAQDL 413
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L + +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 LEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|126662148|ref|ZP_01733147.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
gi|126625527|gb|EAZ96216.1| ATP-dependent DNA helicase recQ [Flavobacteria bacterium BAL38]
Length = 731
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 112/210 (53%), Gaps = 30/210 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + ++ + +SG+IY S K+ E++ + L+ G+ YHA
Sbjct: 212 YYEVRTK---TKNIESDIIRFI-KQHKGKSGVIYCLSRKKVEEIAQVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDIEKLEKFLSGKPVAEQEIGFALLQEVVAYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
F E + G M D+ R ++ + D
Sbjct: 387 FGEEFDGENGEGADMDDNVRNPKKKIEAQD 416
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|300728338|ref|ZP_07061703.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
gi|299774403|gb|EFI71030.1| ATP-dependent DNA helicase RecQ [Prevotella bryantii B14]
Length = 726
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 108/198 (54%), Gaps = 29/198 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K KD +D+ + ++ +SGIIY + K+ E+L E L+ ++ +AYHA
Sbjct: 211 YYEVRPK---TKD-VDKQIIMFIKQHPGKSGIIYCLARKKVEELAEILKANDIKAAAYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S+ +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GR G
Sbjct: 267 GLDSSTRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRVG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGKCIAFYAKKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + C G CD+C+
Sbjct: 386 FGEEYEQDNC-GNCDNCK 402
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|340055704|emb|CCC50025.1| putative ATP-dependent DEAD/H DNA helicase recQ, fragment
[Trypanosoma vivax Y486]
Length = 1395
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 70/185 (37%), Positives = 98/185 (52%), Gaps = 29/185 (15%)
Query: 79 GIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN---------------VSIAFGLGI 122
GI+Y S K CE++ LR G+R S YH++ E N +IAFG+GI
Sbjct: 556 GIVYCLSRKNCEEMAAALRAAGIRASYYHSEAGEKNEKQELWTKDELQVLCATIAFGMGI 615
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF---DQQT 179
+KP+VRFVIH + KS+E +YQESGRAGRDG + CIL D + M+ D +T
Sbjct: 616 NKPDVRFVIHAAMPKSIEGYYQESGRAGRDGLASQCILLCATTDKQRHEQMINSSKDWKT 675
Query: 180 GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR-------GMCDHC---RGGRRDA 229
+ +L +++Y + CRR +F E SD C +CD+C +GGR +
Sbjct: 676 SMRSLLRMLAYTTNDVHCRRMQQLGHFGEHISDQYCLIQPEGTVEICDNCASRKGGRWEP 735
Query: 230 KRVDV 234
VDV
Sbjct: 736 SSVDV 740
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/42 (54%), Positives = 30/42 (71%), Gaps = 3/42 (7%)
Query: 13 LWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
LW QV +IAFG+GI+KP+VRFVIH + KS+E +YQ
Sbjct: 596 LWTKDELQVLCATIAFGMGINKPDVRFVIHAAMPKSIEGYYQ 637
>gi|336171234|ref|YP_004578372.1| RecQ family ATP-dependent DNA helicase [Lacinutrix sp. 5H-3-7-4]
gi|334725806|gb|AEG99943.1| ATP-dependent DNA helicase, RecQ family [Lacinutrix sp. 5H-3-7-4]
Length = 730
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 70/189 (37%), Positives = 103/189 (54%), Gaps = 29/189 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +D ++ ++GI+Y S K E+L + L+ G++ YHA
Sbjct: 210 YYEVRPKTKT----VDSDIIRFVKQNSGKTGIVYCLSRKRVEELAQVLQVNGIKAVPYHA 265
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 266 GLDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 325
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL V +Q+ G A L +V++C + + RR I Y
Sbjct: 326 RDGGEGHCLAYYSYKDIEKLEKFMSGKPVAEQEIGHALLQEVVAFC-ETSMSRRKFILHY 384
Query: 206 FDEAWSDTE 214
F E + DTE
Sbjct: 385 FGEEF-DTE 392
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 290 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 319
>gi|443244229|ref|YP_007377454.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
gi|442801628|gb|AGC77433.1| ATP-dependent DNA helicase [Nonlabens dokdonensis DSW-6]
Length = 730
Score = 119 bits (297), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 108/210 (51%), Gaps = 30/210 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K A +D ++ +SGI+Y S K E+L + L+ G++ YHA
Sbjct: 213 FYEVRPKTA----NVDADITRFIKQNEGKSGIVYCLSRKRVEELAQVLQVNGIKAVPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 269 GLDAKTRVKHQDMFLMEDTDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL + +Q+ G A L +V Y + + RR I Y
Sbjct: 329 RDGGEGHCLAYYSYKDIEKLEKFMSGKPIAEQEIGHALLQEMVGYS-ETSMSRRQYILHY 387
Query: 206 FDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
F E + G M D+ R + + V+
Sbjct: 388 FGEEFDPATGEGGDMDDNMRNPKPQKEAVE 417
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 16 TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
T +IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 287 TDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|340621987|ref|YP_004740439.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
gi|339902253|gb|AEK23332.1| ATP-dependent DNA helicase recQ [Capnocytophaga canimorsus Cc5]
Length = 729
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 74/202 (36%), Positives = 108/202 (53%), Gaps = 34/202 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K AD++ ++ +SGIIY S K+ E+L + L+ G+ Y
Sbjct: 213 YYEVRPKTKNVD------ADIIRFVKQHSKKSGIIYCLSRKKVEELSQTLQVNGITAVPY 266
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 267 HAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR I
Sbjct: 327 AGRDGGEGHCLAFYSYKDVEKLEKFMVGKPIAEQEIGQALLQDIVAYA-ETSSSRRKFIL 385
Query: 204 SYFDEAWSDTECRG--MCDHCR 223
YF E + + G M D+ R
Sbjct: 386 HYFGEEFDEINGEGADMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|429750375|ref|ZP_19283426.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
gi|429165304|gb|EKY07364.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 332
str. F0381]
Length = 727
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 77/204 (37%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ E+L + L+ G+
Sbjct: 211 YYEVRPKTKNVD------ADII--RFVKQNPKKSGIIYCLSRKKVEELTQTLQVNGISAV 262
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 263 PYHAGLDAKTRAKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 322
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSMVF-----DQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL + +Q+ G A L +IV+Y + + RR
Sbjct: 323 GRAGRDGGEGHCLAFYSYKDVEKLEKFMIGKPIAEQEIGQALLQDIVAYA-ETSSSRRKF 381
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 382 ILHYFGEEFDEVNGEGADMDDNVR 405
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 320
>gi|30679600|ref|NP_187225.2| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
gi|75334309|sp|Q9FT74.1|RQL1_ARATH RecName: Full=ATP-dependent DNA helicase Q-like 1; AltName:
Full=RecQ-like protein 1; Short=AtRecQ1; Short=AtRecQl1
gi|10944747|emb|CAC14163.1| DNA Helicase [Arabidopsis thaliana]
gi|332640767|gb|AEE74288.1| ATP-dependent DNA helicase Q-like 1 [Arabidopsis thaliana]
Length = 606
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 33/203 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+V +K K+ L +L +L+ RF++QSGI+Y S EC D+ + L + ++ YHA
Sbjct: 404 YEVIVK---TKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHA 460
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDK +VRFVIH+ LSK++E++YQESGRAG
Sbjct: 461 GVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAG 520
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAII 202
RDG A CI Y+ D ++ M+ + Q + +A + YC +T CRR ++
Sbjct: 521 RDGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQML 580
Query: 203 ASYFDEAWSDTECRG---MCDHC 222
YF E++ C+ CD+C
Sbjct: 581 LEYFGESFDRMICKSSLNPCDNC 603
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T ++ +IAFG+GIDK +VRFVIH+ LSK++E++YQ
Sbjct: 474 WQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQ 514
>gi|399215939|emb|CCF72627.1| unnamed protein product [Babesia microti strain RI]
Length = 706
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 116/219 (52%), Gaps = 38/219 (17%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYT 83
AF ++PN++F +V K K ++EL + R + SGI+Y
Sbjct: 360 AFSCNFNRPNLKF--------------KVVPKSRNTKLAIEELIGYV-REYPTSSGIVYC 404
Query: 84 TSIKECEDLREELRNRGLRVSAYHAKLES---------------NV---SIAFGLGIDKP 125
S ++CE + EL G+ YHA+L+ NV ++AFG+GIDK
Sbjct: 405 LSCQDCEFVSSELVKSGINSMHYHAQLDQLTRKHVQQSWMEGSINVVVATLAFGMGIDKS 464
Query: 126 NVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLY 185
NVRFVIH + KS+EN++QE+GRAGRDG++A CI+ Y D +L S+V + ++ +
Sbjct: 465 NVRFVIHFSMPKSIENYFQEAGRAGRDGELATCIVMYDYKDSQRLLSLVKNGES----IK 520
Query: 186 NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
++ YC + +CRR ++ +F + C +CD+C+
Sbjct: 521 KMLEYCENPKKCRREMLLGHFGQKLKGP-CDVICDNCQA 558
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVRFVIH + KS+EN++Q
Sbjct: 454 TLAFGMGIDKSNVRFVIHFSMPKSIENYFQ 483
>gi|397781220|ref|YP_006545693.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
gi|396939722|emb|CCJ36977.1| ATP-dependent DNA helicase RecQ [Methanoculleus bourgensis MS2]
Length = 604
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/173 (38%), Positives = 92/173 (53%), Gaps = 27/173 (15%)
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SI 116
R+ +GIIY S K EDL E+LR +G YHA L V ++
Sbjct: 226 RDDAGIIYCFSQKATEDLAEKLRGKGFSALPYHAGLPDAVRDEHQEAFSHGDVGIICATV 285
Query: 117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD 176
AFG+GIDKP+VRFVIH L K +E++YQE+GRAGRDG+ A CIL+Y D + ++
Sbjct: 286 AFGMGIDKPDVRFVIHTDLPKDLESYYQETGRAGRDGEPADCILFYSRGDYNTIRYLIEK 345
Query: 177 Q-------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ ++ YC + T CRR + +YF EA+ + C G CD C
Sbjct: 346 ECADATRKDAAYRKAGAMLDYC-ETTGCRRKFLLTYFGEAYPEERC-GGCDRC 396
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFVIH L K +E++YQ
Sbjct: 284 TVAFGMGIDKPDVRFVIHTDLPKDLESYYQ 313
>gi|298209031|ref|YP_003717210.1| ATP-dependent DNA helicase [Croceibacter atlanticus HTCC2559]
gi|83848958|gb|EAP86827.1| putative ATP-dependent DNA helicase [Croceibacter atlanticus
HTCC2559]
Length = 734
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 68/185 (36%), Positives = 102/185 (55%), Gaps = 28/185 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + +R +SGIIY S K E+L + L+ G+ YHA
Sbjct: 213 YYEVRPK---TKEVFSDIIRFIKKR-TGKSGIIYCLSRKSVEELAQTLQVNGISAVPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 269 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ +Y D+ KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 329 RDGGEGHCLAFYAYKDIEKLEKFMSGKPVAEQEIGHALLQEVVAYA-ETSMSRRKFLLHY 387
Query: 206 FDEAW 210
F E++
Sbjct: 388 FGESF 392
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 322
>gi|440494379|gb|ELQ76762.1| ATP-dependent DNA helicase [Trachipleistophora hominis]
Length = 838
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 105/184 (57%), Gaps = 22/184 (11%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL---ESNV- 114
+KD + ++ ++ + GIIY S +E E++ +L N + YHA L E N
Sbjct: 550 KKDTITQIVSFINTYYPRSPGIIYVISKREAEEVSHKL-NGHITSLYYHAGLTKKERNAV 608
Query: 115 --------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
++AFG+GI+K NVR+VIHH + S+EN+YQE+GRAGRDG + CIL
Sbjct: 609 QRKWSTDEVRVIVATVAFGMGINKRNVRYVIHHSMPYSLENYYQETGRAGRDGLQSTCIL 668
Query: 161 YYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+Y D +L+++ +Q NL +V YC + T CRR +I YF+E +D+ C G CD
Sbjct: 669 FYSYADKNRLNNL-LKRQVERDNLSRVVQYCENVTECRRKLILQYFNERLTDS-CTG-CD 725
Query: 221 HCRG 224
+C+
Sbjct: 726 NCQN 729
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W T +V ++AFG+GI+K NVR+VIHH + S+EN+YQ
Sbjct: 612 WSTDEVRVIVATVAFGMGINKRNVRYVIHHSMPYSLENYYQ 652
>gi|6714387|gb|AAF26076.1|AC012393_2 putative DNA helicase [Arabidopsis thaliana]
Length = 624
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 111/203 (54%), Gaps = 33/203 (16%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
Y+V +K K+ L +L +L+ RF++QSGI+Y S EC D+ + L + ++ YHA
Sbjct: 422 YEVIVK---TKEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHA 478
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ + +IAFG+GIDK +VRFVIH+ LSK++E++YQESGRAG
Sbjct: 479 GVPAKQRVDVQRKWQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAG 538
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAII 202
RDG A CI Y+ D ++ M+ + Q + +A + YC +T CRR ++
Sbjct: 539 RDGLQAQCICLYQKKDFSRVVCMLRNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQML 598
Query: 203 ASYFDEAWSDTECRG---MCDHC 222
YF E++ C+ CD+C
Sbjct: 599 LEYFGESFDRMICKSSLNPCDNC 621
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 33/41 (80%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T ++ +IAFG+GIDK +VRFVIH+ LSK++E++YQ
Sbjct: 492 WQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQ 532
>gi|392558417|gb|EIW51605.1| ATP-dependent DNA helicase [Trametes versicolor FP-101664 SS1]
Length = 717
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 104/214 (48%), Gaps = 30/214 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---NRGLRVSAY 106
Y V KP++ + + + D + +GI+Y S K+ E + E L R + Y
Sbjct: 223 YSVLPKPSSAQSSIRAMCDYILEHHPKDTGIVYCLSKKDAEHVAEALSEESGRKILTGVY 282
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +V +IAFGLGIDK +VR+V+HH + KS++ FYQESGR
Sbjct: 283 HADVADSVKESLHKKWRSGQVKVVCATIAFGLGIDKGDVRYVLHHTVRKSLDGFYQESGR 342
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDG+ A C+LYYR D ++ S+ G + +++ + D CR+ A YF E
Sbjct: 343 AGRDGKDADCVLYYRPQDATRIGSLTCGDHNGEEKVLSMLKFACDLEECRKIQFARYFSE 402
Query: 209 -------AWSDTECRGM--CDHCRGGRRDAKRVD 233
+W E + C HC R + VD
Sbjct: 403 SSNLSLHSWGTAEEDALARCGHCDNCTRPPETVD 436
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR+ +V +IAFGLGIDK +VR+V+HH + KS++ FYQ
Sbjct: 298 WRSGQVKVVCATIAFGLGIDKGDVRYVLHHTVRKSLDGFYQ 338
>gi|325268722|ref|ZP_08135351.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
gi|324988966|gb|EGC20920.1| ATP-dependent helicase RecQ [Prevotella multiformis DSM 16608]
Length = 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + D D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVRAKKS--DDDTDRQIIKFIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMEDLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICIVFYSKKDLNKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 388 FGEEYPKDNC-GMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|343085469|ref|YP_004774764.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
gi|342354003|gb|AEL26533.1| ATP-dependent DNA helicase RecQ [Cyclobacterium marinum DSM 745]
Length = 725
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 111/202 (54%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P + + E+ + + + +SGIIY S K+ ++ E L+ G+ + YHA
Sbjct: 207 YYEVR--PKVKSETKKEIIKYIKSQ-KGKSGIIYCLSRKKVTEIAELLKVNGINAAPYHA 263
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ +V +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GR+G
Sbjct: 264 GLDGHVRVKNQDDFLNEEVDVIVATIAFGMGIDKPDVRYVIHYDVPKSLEGYYQETGRSG 323
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+++YR D+ KL V +++ L + +Y + + CRR + Y
Sbjct: 324 RDGLEGHCLMFYRYEDIIKLEKFNKDKPVNERENARVLLQEMAAYA-ESSVCRRRFLLHY 382
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E S +C G CD+C+ +
Sbjct: 383 FGETLS-KDC-GFCDNCKKTKE 402
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 288 TIAFGMGIDKPDVRYVIHYDVPKSLEGYYQ 317
>gi|430814293|emb|CCJ28450.1| unnamed protein product [Pneumocystis jirovecii]
Length = 1066
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 65/178 (36%), Positives = 103/178 (57%), Gaps = 24/178 (13%)
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN---------- 113
++ D+++ ++ +SGIIY S K CED + R++ +++ YHA + +
Sbjct: 723 DIRDIITSKYPGKSGIIYCFSRKNCEDTARKFRDKYHMKIHHYHAGMTNKERSQVQKDWK 782
Query: 114 --------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDK +VRFVIH L KS+E +YQE+GRAGRDG IA R+
Sbjct: 783 KGKYHIIVATIAFGMGIDKSDVRFVIHLFLPKSLEGYYQETGRAGRDGNIAE---LERMI 839
Query: 166 DVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
D S ++Q A+L+ ++ +C ++ CRR + +YF+E +S+ EC CD+CR
Sbjct: 840 DKGDASWTQKNRQK--ASLHLVLQFCENKVDCRRKQLLAYFNEKFSEKECNQTCDNCR 895
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y + +IAFG+GIDK +VRFVIH L KS+E +YQ
Sbjct: 781 WKKGKYHIIVATIAFGMGIDKSDVRFVIHLFLPKSLEGYYQ 821
>gi|386820490|ref|ZP_10107706.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
gi|386425596|gb|EIJ39426.1| ATP-dependent DNA helicase RecQ [Joostella marina DSM 19592]
Length = 733
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 112/214 (52%), Gaps = 38/214 (17%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K E+L + L+ GL+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNEGKSGIIYCLSRKRVEELAQTLQVNGLKAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRARHQDMFLMEDTDIVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL V +Q+ G A L ++V+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEVGHALLQDMVAYA-ETSMSRRKY 383
Query: 202 IASYFDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
I YF E + + G M D+ R ++ + D
Sbjct: 384 ILHYFGEEFDEVNGEGADMDDNIRHPKKKHEAKD 417
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 16 TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
T +IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 287 TDIVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|319900082|ref|YP_004159810.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
gi|319415113|gb|ADV42224.1| ATP-dependent DNA helicase RecQ [Bacteroides helcogenes P 36-108]
Length = 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 107/203 (52%), Gaps = 31/203 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A +D + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDRDIIK-----FIKNNSEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLH 385
Query: 205 YFDEAWSDTECRGMCDHCRGGRR 227
YF E +++ C G CD+C ++
Sbjct: 386 YFGEEYTEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|383450034|ref|YP_005356755.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
gi|380501656|emb|CCG52698.1| ATP-dependent DNA helicase RecQ1 [Flavobacterium indicum
GPTSA100-9]
Length = 731
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 71/206 (34%), Positives = 111/206 (53%), Gaps = 34/206 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K + AD++ ++ + +SG+IY S K+ E++ + L+ G+ Y
Sbjct: 212 YYEVRPKTKNVE------ADIIRFIKQHKGKSGVIYCLSRKKVEEIAQVLQVNGISAVPY 265
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 266 HAGLDAKTRAKHQDMFLMEDVEVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGR 325
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ YY D+ KL V +Q+ G A L +V+Y + + RR +
Sbjct: 326 AGRDGGEGHCLAYYSYKDIEKLEKFMAGKPVAEQEIGYALLQEVVAYA-ETSMSRRKYLL 384
Query: 204 SYFDEAWSDTECRG--MCDHCRGGRR 227
YF E + + G M D+ R ++
Sbjct: 385 HYFGEEFDEVNGEGADMDDNVRNPKK 410
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|373849778|ref|ZP_09592579.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
gi|372475943|gb|EHP35952.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV5]
Length = 620
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 105/198 (53%), Gaps = 29/198 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P Q L ++ D + +R ++SGIIY + E E L +RG YHA L +
Sbjct: 207 RVLPKDQP--LKQIIDFVKKR-EDESGIIYCATRATAEKTAESLASRGYAARPYHAGLSA 263
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+ +IAFG+GI+KPNVR+VIHH L K++E +YQE+GRAGRDG
Sbjct: 264 DDRSANQELFLRDDVKIICATIAFGMGINKPNVRWVIHHDLPKNIEGYYQETGRAGRDGL 323
Query: 155 IAHCILYYRLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
A C+L Y D+ K + + +QQ L ++S+ + T CRR + YF E
Sbjct: 324 PADCLLLYSAGDIVKQTHFIDEITDAHEQQVARRQL-RLMSHYAEDTTCRRRTLLDYFGE 382
Query: 209 AWSDTECRGMCDHCRGGR 226
A++ C G CD+C+ R
Sbjct: 383 AFAVDNC-GACDNCQEPR 399
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVR+VIHH L K++E +YQ
Sbjct: 283 ATIAFGMGINKPNVRWVIHHDLPKNIEGYYQ 313
>gi|325855159|ref|ZP_08171782.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
gi|325483896|gb|EGC86840.1| ATP-dependent DNA helicase RecQ [Prevotella denticola CRIS 18C-A]
Length = 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + D D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVRAKKS--DDDTDRQIIKFIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGLCIVFYSKKDLNKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 388 FGEDYPKDNC-GMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|406997576|gb|EKE15607.1| hypothetical protein ACD_11C00117G0003 [uncultured bacterium]
Length = 719
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 99/193 (51%), Gaps = 29/193 (15%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----- 113
+K+ ++L L+ R R +S IIY S K+ E+L LR+ G AYHA L+S
Sbjct: 208 KKNSFEKLLKLLENR-RKESVIIYCFSRKDTENLALNLRSEGFSALAYHAGLDSAKRKKT 266
Query: 114 -------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDKP+VR V+H+ KS+E +YQE GRAGRDG A C++
Sbjct: 267 QEDFIQDKINIIVATIAFGMGIDKPDVRMVVHYTFPKSLEGYYQEVGRAGRDGLPAECVM 326
Query: 161 YYRLPDVFK-------LSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
+Y D K + +QT L ++ Y D CRR I SYF E +
Sbjct: 327 FYTFADARKHRYFINVMDDENLKRQTE-RKLQEVMDYA-DLNSCRRRHILSYFGEKYEKE 384
Query: 214 ECRGMCDHCRGGR 226
C G CDHC G+
Sbjct: 385 NCGG-CDHCLSGK 396
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR V+H+ KS+E +YQ
Sbjct: 281 TIAFGMGIDKPDVRMVVHYTFPKSLEGYYQ 310
>gi|427385455|ref|ZP_18881762.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425727099|gb|EKU89960.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 67/176 (38%), Positives = 96/176 (54%), Gaps = 25/176 (14%)
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SI 116
+ +SGIIY S K+ E+L E L+ G+ AYHA ++S +I
Sbjct: 234 QEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATI 293
Query: 117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM--- 173
AFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 294 AFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQG 353
Query: 174 --VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E + + C G CD+C ++
Sbjct: 354 KPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYMEENC-GNCDNCLNPKK 407
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 321
>gi|327312566|ref|YP_004328003.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
gi|326944958|gb|AEA20843.1| ATP-dependent DNA helicase RecQ [Prevotella denticola F0289]
Length = 727
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 105/197 (53%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + D D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVRAKKS--DDDTDRQIIKFIKQHAGKSGIIYCLSRKKVEELAAVLQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSRTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGLCIVFYSKKDLNKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 388 FGEDYPKDNC-GMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|298675436|ref|YP_003727186.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
gi|298288424|gb|ADI74390.1| ATP-dependent DNA helicase RecQ [Methanohalobium evestigatum
Z-7303]
Length = 596
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 105/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A K + L + R +GIIY S + EDL +L+ G RV YHA
Sbjct: 202 YYEVRHKKDAYKQMVRYL-----KTHRKYNGIIYCQSRRAVEDLYNKLKKEGFRVLPYHA 256
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L + + +IAFG+GI+KPNVRFVIH+ L K++EN+YQ++GR G
Sbjct: 257 GLPAKIREENQESFIRDDVQIIVATIAFGMGINKPNVRFVIHYDLPKNLENYYQQTGRGG 316
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG CIL++ D +K+ + ++ L+ L ++ YC + CRR ++ +
Sbjct: 317 RDGLDCDCILFFSYGDRYKIEYFINQKSRKSERDIALSKLNMMIDYC-ESNVCRRKLLLN 375
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + C G CD C
Sbjct: 376 YFGEDFDVQNC-GKCDVC 392
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 28/31 (90%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVRFVIH+ L K++EN+YQ
Sbjct: 280 ATIAFGMGINKPNVRFVIHYDLPKNLENYYQ 310
>gi|303271731|ref|XP_003055227.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463201|gb|EEH60479.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 581
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/216 (32%), Positives = 105/216 (48%), Gaps = 45/216 (20%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSG-----IIYTTSIKECEDLREELRNR---- 99
Y+VR K K +DE+ D+++ +F ++G I+Y S +C + L +
Sbjct: 269 MYEVRKK---GKKTVDEIKDIIAEKFTQRNGRVACGIVYCFSQNDCVKVAAALHTKPRAD 325
Query: 100 -----GLRVSAYHAKLESN-----------------VSIAFGLGIDKPNVRFVIHHCLSK 137
GL YHA + ++AFG+GI+KP+VRFV HH + K
Sbjct: 326 KRFPKGLAAVPYHAGMGEEREYNQRQWSNGQVSIICATVAFGMGINKPDVRFVFHHSIPK 385
Query: 138 SMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ-----------QTGLANLYN 186
S+E ++QESGRAGRDG + C LYY D K SM+ D L L +
Sbjct: 386 SLEAYHQESGRAGRDGAKSFCYLYYSYGDAQKARSMLMDSAMKDNAPREVLDNNLGALNS 445
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+VSYC + CRR ++ +F+E + +C MCD C
Sbjct: 446 LVSYCENVCECRRTLLLGHFNETFDSQKCGRMCDAC 481
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/37 (48%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ S ++AFG+GI+KP+VRFV HH + KS+E ++Q
Sbjct: 356 QVSIICATVAFGMGINKPDVRFVFHHSIPKSLEAYHQ 392
>gi|329962624|ref|ZP_08300572.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
gi|328529655|gb|EGF56553.1| ATP-dependent DNA helicase RecQ [Bacteroides fluxus YIT 12057]
Length = 727
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 108/203 (53%), Gaps = 31/203 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A +D + + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDRDIIKFI-----KNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKALLH 385
Query: 205 YFDEAWSDTECRGMCDHCRGGRR 227
YF E +++ C G CD+C ++
Sbjct: 386 YFGEEYTEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|307566216|ref|ZP_07628664.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
gi|307345074|gb|EFN90463.1| ATP-dependent DNA helicase RecQ [Prevotella amnii CRIS 21A-A]
Length = 727
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 107/201 (53%), Gaps = 27/201 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +D ++ ++ +SGIIY S K+ E+L L ++ +AYHA
Sbjct: 211 YYEVRFK--KNEDDTNKQIIRFIKQHSGKSGIIYCLSRKKVEELAAILIANDIKAAAYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDQFLMEDIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI +Y D+ KL + +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICIAFYSRNDLKKLEKFMEGKPIAEQDIGRQLLQETEAYA-ESSVCRRKLLLHY 387
Query: 206 FDEAWSDTECRGMCDHCRGGR 226
F E + C GMCD+CR +
Sbjct: 388 FGEEYPKDNC-GMCDNCRNPK 407
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|410670594|ref|YP_006922965.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
gi|409169722|gb|AFV23597.1| ATP-dependent DNA helicase RecQ [Methanolobus psychrophilus R15]
Length = 705
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 102/198 (51%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
Y++R K K+ D++ + RR + + GIIY S K + + +LR G YHA
Sbjct: 202 LYEIRPK----KETYDQILQYL-RRNKGKGGIIYCQSRKNVDTVTAKLRKAGFNALPYHA 256
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L +IAFG+GIDKPNVRFVIH+ L K++E +YQE+GR G
Sbjct: 257 GLSDTQRGRNQEAFIKDKADIIVATIAFGMGIDKPNVRFVIHYDLPKNLEGYYQETGRGG 316
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF------DQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG CIL++ D +++ V ++ L L ++V+YC+ T CRR + S
Sbjct: 317 RDGLECECILFFSHGDRYRIEYFVKQKGRKEERDIALKQLQDMVNYCVSTT-CRRKALLS 375
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + C G CD C
Sbjct: 376 YFGEELEEDNCGG-CDAC 392
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFVIH+ L K++E +YQ
Sbjct: 280 ATIAFGMGIDKPNVRFVIHYDLPKNLEGYYQ 310
>gi|381186153|ref|ZP_09893727.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
gi|379651827|gb|EIA10388.1| ATP-dependent DNA helicase RecQ [Flavobacterium frigoris PS1]
Length = 731
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 72/200 (36%), Positives = 107/200 (53%), Gaps = 30/200 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + ++ + +SGIIY S K+ E + L+ G+ YHA
Sbjct: 212 YYEVRTK---TKNVESDIIRFI-KQHKGKSGIIYCLSRKKVEAIAHVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY DV KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDVEKLEKFMSGKPVAEQEIGFALLQEVVAYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRG--MCDHCR 223
F E + + G M D+ R
Sbjct: 387 FGEEFDNATGEGGDMDDNVR 406
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 321
>gi|261880042|ref|ZP_06006469.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
gi|270333282|gb|EFA44068.1| ATP-dependent helicase RecQ [Prevotella bergensis DSM 17361]
Length = 742
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/200 (36%), Positives = 110/200 (55%), Gaps = 31/200 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A+++D ++ + ++ +SGIIY S K+ E+L ++L+ G + + YHA
Sbjct: 217 YYEVRQK-ASEEDADSQIIRFL-KQHEGKSGIIYCLSRKKVEELSKKLQINGYKAAPYHA 274
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ V +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 275 GLDTEVRTQTQDDFLREDIDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 334
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTR-------CRRAIIA 203
RDG CI +Y D+ KL F G A I L++T+ CRR +
Sbjct: 335 RDGGEGRCIAFYSPKDLKKLEK--FTDNKGEAE-KEISRQLLEETKAYAESSVCRRKFLL 391
Query: 204 SYFDEAWSDTECRGMCDHCR 223
YF E ++ C CD+C+
Sbjct: 392 HYFGEEYTKENCEN-CDNCK 410
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 298 ATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 328
>gi|346225175|ref|ZP_08846317.1| putative ATP-dependent DNA helicase [Anaerophaga thermohalophila
DSM 12881]
Length = 726
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 30/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K A +D + L + +S IIY S K+ E+L E L G++ YHA
Sbjct: 211 FYEIRPKVNATRDIIKVL-----KENPGKSVIIYCLSRKKVEELAETLVVNGIKALPYHA 265
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR VIH+ + KS+E +YQE+GRAG
Sbjct: 266 GMDAATRSGNQDKFLMEDIDVIVATIAFGMGIDKPDVRMVIHYDIPKSLEGYYQETGRAG 325
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL + +Q+ G L V+Y + + CRR + Y
Sbjct: 326 RDGGEGRCIAFYSYKDIQKLEKFMQGKPLAEQEIGKQLLLETVAYA-ESSLCRRKTLLHY 384
Query: 206 FDEAWSDTECRGMCDHC 222
F E +++ C G CD+C
Sbjct: 385 FGETYTEENC-GSCDNC 400
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR VIH+ + KS+E +YQ
Sbjct: 290 TIAFGMGIDKPDVRMVIHYDIPKSLEGYYQ 319
>gi|313149548|ref|ZP_07811741.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313138315|gb|EFR55675.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 734
Score = 118 bits (295), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 243 KSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAF 302
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 303 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKP 362
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E +++ C G CD+C ++
Sbjct: 363 VAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYTEENC-GNCDNCLNPKK 414
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 299 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 328
>gi|345882276|ref|ZP_08833781.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
gi|343918032|gb|EGV28804.1| ATP-dependent DNA helicase RecQ [Prevotella oulorum F0390]
Length = 725
Score = 118 bits (295), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 104/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D+ R+ +SGIIY S K+ E+L E LR ++ + YHA
Sbjct: 211 YYEVRPK----TNDIDKQIIKFIRQNAGKSGIIYCLSRKKVEELAEILRANDIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LES V +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLESGVRSQTQDDFLMERLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGQCIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRRMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C CD+C
Sbjct: 386 FGEEYPYDNCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERLDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|255690572|ref|ZP_05414247.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|423301599|ref|ZP_17279622.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
gi|260624034|gb|EEX46905.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii DSM 17565]
gi|408471592|gb|EKJ90123.1| ATP-dependent DNA helicase RecQ [Bacteroides finegoldii CL09T03C10]
Length = 726
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/209 (34%), Positives = 107/209 (51%), Gaps = 29/209 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKRVEELAEILQANGINARPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSVTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
F E +++ C G CD+C ++ + D+
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKKQVEAQDL 413
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|340351994|ref|ZP_08674884.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
gi|339615729|gb|EGQ20399.1| ATP-dependent helicase RecQ [Prevotella pallens ATCC 700821]
Length = 727
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++D ++ + + +SGIIY S K+ E+L L+ ++ YHA
Sbjct: 211 YYEVRSK-KNEEDTNRQIIKFIKQN-PGKSGIIYCLSRKKVEELAAVLQANDIKAEPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSRTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL + V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGQCIVFYSKNDLKKLENFMDGKPVAEQDIGRQLLQETETYA-ESSVCRRKLLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 388 FGEDYPKDNC-GMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|53715360|ref|YP_101352.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60683329|ref|YP_213473.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|265767847|ref|ZP_06095379.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|336412096|ref|ZP_08592554.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|375360137|ref|YP_005112909.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|383119914|ref|ZP_09940651.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|423252209|ref|ZP_17233211.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423252529|ref|ZP_17233460.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|423261243|ref|ZP_17242144.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267768|ref|ZP_17246748.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|423272323|ref|ZP_17251291.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423276779|ref|ZP_17255711.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|423283055|ref|ZP_17261940.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|52218225|dbj|BAD50818.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|60494763|emb|CAH09569.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
gi|251944080|gb|EES84599.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|263252519|gb|EEZ24047.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|301164818|emb|CBW24378.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|335939268|gb|EGN01145.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|387774395|gb|EIK36507.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392647821|gb|EIY41518.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392660605|gb|EIY54214.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|392695515|gb|EIY88727.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392695991|gb|EIY89195.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392696027|gb|EIY89229.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|404581329|gb|EKA86028.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 726
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E +++ C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYTEENC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|85817623|gb|EAQ38797.1| ATP-dependent DNA helicase RecQ [Dokdonia donghaensis MED134]
Length = 731
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 106/196 (54%), Gaps = 36/196 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AQ D AD++ RF Q SGIIY + K E+L + L+ GL+
Sbjct: 213 YYEVRPK-TAQVD-----ADII--RFVKQNEGKSGIIYCLARKRVEELAQTLQVNGLKAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL V +Q+ G A L +V++ + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAEQEIGHALLQEVVAFA-ETSISRRKF 383
Query: 202 IASYFDEAWSDTECRG 217
I YF E + + G
Sbjct: 384 ILHYFGEEFDNATGEG 399
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|315607430|ref|ZP_07882426.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
gi|315250862|gb|EFU30855.1| ATP-dependent helicase RecQ [Prevotella buccae ATCC 33574]
Length = 740
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 224 YYEVRQKSAD----IDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYHA 279
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 280 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 339
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 340 RDGGEGYCLVFYSPKDLKKLEKFMEGKAVAEQDIGRQLLQETKAYA-ESSVCRRKMLLHY 398
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 399 FGEEYTKDNC-GMCDNC 414
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 295 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 333
>gi|423280579|ref|ZP_17259491.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|424665170|ref|ZP_18102206.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404575034|gb|EKA79779.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404583786|gb|EKA88459.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 726
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 96/174 (55%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDNFLMEKIDVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E +++ C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYTEENC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|402307191|ref|ZP_10826218.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
gi|400379031|gb|EJP31880.1| ATP-dependent DNA helicase RecQ [Prevotella sp. MSX73]
Length = 740
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 224 YYEVRQKSAD----IDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYHA 279
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 280 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 339
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 340 RDGGEGYCLVFYSPKDLKKLEKFMEGKAVAEQDIGRQLLQETKAYA-ESSVCRRKMLLHY 398
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 399 FGEEYTKDNC-GMCDNC 414
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 295 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 333
>gi|288924568|ref|ZP_06418505.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
gi|288338355|gb|EFC76704.1| ATP-dependent DNA helicase RecQ [Prevotella buccae D17]
Length = 740
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 106/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 224 YYEVRQKSAD----IDTQIVKFVKQHAGKSGIIYCLSRKKVEELAAVLKVNEIKAAPYHA 279
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 280 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 339
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 340 RDGGEGYCLVFYSPKDLKKLEKFMEGKAVAEQDIGRQLLQETKAYA-ESSVCRRKMLLHY 398
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 399 FGEEYTKDNC-GMCDNC 414
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 295 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 333
>gi|332291025|ref|YP_004429634.1| RecQ familyATP-dependent DNA helicase [Krokinobacter sp. 4H-3-7-5]
gi|332169111|gb|AEE18366.1| ATP-dependent DNA helicase, RecQ family [Krokinobacter sp.
4H-3-7-5]
Length = 732
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 36/196 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AQ D AD++ RF Q SGIIY + K E+L + L+ GL+
Sbjct: 213 YYEVRPK-TAQVD-----ADII--RFVKQNEGKSGIIYCLARKRVEELAQTLQVNGLKAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRVRHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL + +Q+ G A L +V++ + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPIAEQEIGHALLQEVVAFA-ETSMSRRKF 383
Query: 202 IASYFDEAWSDTECRG 217
I YF E + + G
Sbjct: 384 ILHYFGEEFDNITGEG 399
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|288800855|ref|ZP_06406312.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
gi|288332316|gb|EFC70797.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 299 str.
F0039]
Length = 725
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 73/206 (35%), Positives = 109/206 (52%), Gaps = 32/206 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K D EL + ++ +SGI+Y S K+ E+L L+ ++ +AYHA
Sbjct: 211 YYEVRPK---TNDVDKELIKFI-KKNEGKSGIVYCLSRKKVEELSAILQANNIKAAAYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFV+H+ + KS+E +YQE+GRAG
Sbjct: 267 GLDNIPRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVVHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGHCLAFYSYKDIQKLEKFMEGKPVAEQDIGRQLLKETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKR 231
F E + C G CD+C R AK+
Sbjct: 386 FGEEYPKENC-GNCDNC---NRPAKK 407
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFV+H+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVVHYDIPKSLEGYYQ 320
>gi|282878161|ref|ZP_06286958.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
gi|281299739|gb|EFA92111.1| ATP-dependent DNA helicase RecQ [Prevotella buccalis ATCC 35310]
Length = 725
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 105/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D + R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRQKASD----IDRQIIMFIRQHEGKSGIIYCLSRKKVEELSEVLKANNIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGICVAFYARKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E+++ C CD+C
Sbjct: 386 FGESYTQPNCHS-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|221040662|dbj|BAH12008.1| unnamed protein product [Homo sapiens]
Length = 1047
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 96/162 (59%), Gaps = 25/162 (15%)
Query: 78 SGIIYTTSIKECEDLREELR----NRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVIHH 133
SGIIY S +EC+ + + L+ G +V +IAFG+GIDKP+VRFVIH
Sbjct: 543 SGIIYCLSRRECDTMADTLQKWINQDGCQVIC--------ATIAFGMGIDKPDVRFVIHA 594
Query: 134 CLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLY 185
L KS+E +YQESGRAGRDG+I+HC+L+Y DV +L ++ ++ G NLY
Sbjct: 595 SLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMMEKDGNHHTRETHFNNLY 654
Query: 186 NIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHC 222
++V YC + T CRR + +YF E ++ C+ CD+C
Sbjct: 655 SMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNC 696
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH L KS+E +YQ
Sbjct: 575 ATIAFGMGIDKPDVRFVIHASLPKSVEGYYQ 605
>gi|302927173|ref|XP_003054442.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256735383|gb|EEU48729.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 477
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 100/187 (53%), Gaps = 32/187 (17%)
Query: 64 DELADL--MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------- 114
+ LA+L ++ R + GIIYT S ECE L LR+ G+ +HA+L +V
Sbjct: 256 ERLAELTQVNERVESVPGIIYTISRDECESLANNLRDEGIGARPFHARLPKDVKEETLSR 315
Query: 115 -------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+ AFG+GIDK NVRFV+H + KS E +YQE+GRAGRDG ++C LY
Sbjct: 316 WIRNDPGYDIIVATTAFGMGIDKNNVRFVVHWRIPKSFEGYYQEAGRAGRDGNASYCFLY 375
Query: 162 YRLPDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT- 213
Y D+ +++ M+ +Q L +L + YC +CR A+I YF E +DT
Sbjct: 376 YSREDLERVTRMIRSDSKEEANQTARLKSLQALAEYCESTNKCRHALICKYFGE--TDTP 433
Query: 214 ECRGMCD 220
+C CD
Sbjct: 434 DCDFACD 440
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H + KS E +YQ
Sbjct: 328 ATTAFGMGIDKNNVRFVVHWRIPKSFEGYYQ 358
>gi|303236792|ref|ZP_07323371.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
gi|302482960|gb|EFL45976.1| ATP-dependent DNA helicase RecQ [Prevotella disiens FB035-09AN]
Length = 750
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 107/197 (54%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K ++D ++ + + + +SGIIY S K+ E+L L+ ++ YHA
Sbjct: 234 YYEVRPK-KNEEDTNRQIIKFIKQN-QGKSGIIYCLSRKKVEELAAVLQANEIKAEPYHA 291
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 292 GLDSETRSKTQDDFLMENIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 351
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 352 RDGEEGKCIVFYSKNDLKKLEKFMEGKPVSEQDIGRQLLQETETYA-ESSVCRRKLLLHY 410
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C GMCD+C
Sbjct: 411 FGEEYLKDNC-GMCDNC 426
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 316 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 345
>gi|302851980|ref|XP_002957512.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
gi|300257154|gb|EFJ41406.1| hypothetical protein VOLCADRAFT_68317 [Volvox carteri f.
nagariensis]
Length = 544
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 118/255 (46%), Gaps = 71/255 (27%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRF------RN 76
+ F ++PN+R+ + + KS K +++L L+ RF R
Sbjct: 218 VVFKSSFNRPNLRYEV---VRKS--------------KAIVEDLKTLLLERFVDRVKKRV 260
Query: 77 QSGIIYTTSIKECEDLREELR------NRGLRVSAYHAKLESN----------------- 113
Q GI+Y S ECE + EELR R L + YHA L +
Sbjct: 261 QCGIVYCQSRGECERVAEELRKVRQPNGRMLNAAHYHAALSHDEREQVQTRWSNDEVQVI 320
Query: 114 -VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
+IAFG+GI+KP+VRFVIH L KS+E ++QE+GR GRDG A C+LYY D K
Sbjct: 321 VATIAFGMGINKPDVRFVIHFSLPKSLEGYHQETGRGGRDGAEAICLLYYNYGDAQKARH 380
Query: 173 MVFDQQ-------------TGLANL-----------YNIVSYCLDQTRCRRAIIASYFDE 208
M+ T + NL I+ + +Q CRR ++ +F E
Sbjct: 381 MLTTSAQCGSCTTPGGVFWTRVCNLDHFLLSAVPFKARIIMFAEEQVECRRVLLMQHFGE 440
Query: 209 AWSDTECRGMCDHCR 223
A+ ++CRG CD+C+
Sbjct: 441 AFDPSQCRGTCDNCK 455
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W QV +IAFG+GI+KP+VRFVIH L KS+E ++Q
Sbjct: 312 WSNDEVQVIVATIAFGMGINKPDVRFVIHFSLPKSLEGYHQ 352
>gi|170078505|ref|YP_001735143.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
gi|169886174|gb|ACA99887.1| ATP-dependent DNA helicase [Synechococcus sp. PCC 7002]
Length = 712
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/222 (33%), Positives = 115/222 (51%), Gaps = 30/222 (13%)
Query: 29 IDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKE 88
ID+ ++ HC S + N Y + P +K L + RR Q GIIY +S K+
Sbjct: 191 IDQLALQNPSFHCTSFNRPNLY-YEVLPKVRKSYTQLLCYVRQRR--GQPGIIYCSSRKK 247
Query: 89 CEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFV 130
++L + L+ G++ YHA L + ++AFG+GI+KP+VRFV
Sbjct: 248 VDELADRLKQDGVKALPYHAGLADRLRADYQEQFIRDDVPVMVATVAFGMGINKPDVRFV 307
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV------FKLSSMVFDQQTGLANL 184
+H+ L ++E +YQESGRAGRDG+ AHC L+YR D+ +L +++ L
Sbjct: 308 VHYDLPTNLERYYQESGRAGRDGEPAHCTLFYRAGDIKRAEYFIELKEDEQEKRIAYQQL 367
Query: 185 YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
++ Y + CRR I SYF E + +C G CD+C+ R
Sbjct: 368 QKMIDYA-EGIDCRRTIQLSYFGEQFPG-DC-GGCDNCQNPR 406
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFV+H+ L ++E +YQ
Sbjct: 291 ATVAFGMGINKPDVRFVVHYDLPTNLERYYQ 321
>gi|395804511|ref|ZP_10483749.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
gi|395433398|gb|EJF99353.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. F52]
Length = 768
Score = 117 bits (294), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 27/194 (13%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++PA D + ++ D + + N+SGIIY S K E+L E+LR G+ AYHA L+
Sbjct: 206 LEVRPAL--DRVKQIIDFIENK-PNESGIIYCLSRKATEELAEKLRKNGIEAKAYHAGLD 262
Query: 112 SNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ +IAFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 263 NETRAKTQDQFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 322
Query: 154 QIAHCILYYRLPDVFKL---SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
A +L+ DV +L +S + LA L + Y D CRR I+ SYF E
Sbjct: 323 LPAETVLFESYADVIQLQKFASEGLNSDIQLAKLDRMKQYA-DAVSCRRKILLSYFGELV 381
Query: 211 SDTECRGMCDHCRG 224
TE G CD C+
Sbjct: 382 --TENCGNCDICKN 393
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 283 ATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 313
>gi|389740691|gb|EIM81881.1| ATP-dependent DNA helicase [Stereum hirsutum FP-91666 SS1]
Length = 732
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 69/214 (32%), Positives = 111/214 (51%), Gaps = 32/214 (14%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR--NRG-LRVSAY 106
Y+V KP + K ++++ + ++GIIY + K+ ED+ + ++ ++G ++ Y
Sbjct: 250 YKVLPKPKSAKAFIEQIIQYIEEEHPGKTGIIYCLTQKDAEDVAKGVQEGSKGKVKCGVY 309
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + +IAFGLGIDK +VRFV+HH SKS+EN+YQESGR
Sbjct: 310 HASIPEPQKEGLHEAWRAGKVKVVAATIAFGLGIDKADVRFVLHH--SKSLENYYQESGR 367
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
AGRDG A C+L+YR D F+L+ + ++ G+ ++ +V + D CR+ YF
Sbjct: 368 AGRDGDDAECVLFYRAQDAFRLTGVYTNEIGGVEKIHGMVQFAQDVLECRKIQFIRYFSS 427
Query: 209 -------AWSDTECRGM--CDHCRGGRRDAKRVD 233
+W+ + C HC RD V+
Sbjct: 428 IEYVAVNSWTQDSKDSLTPCGHCDNCTRDPSTVE 461
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 31/41 (75%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH SKS+EN+YQ
Sbjct: 325 WRAGKVKVVAATIAFGLGIDKADVRFVLHH--SKSLENYYQ 363
>gi|357043893|ref|ZP_09105579.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
gi|355367947|gb|EHG15373.1| ATP-dependent DNA helicase RecQ [Prevotella histicola F0411]
Length = 727
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P D ++ ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVR--PKKNDDDTNKQIIKFIKQHAGKSGIIYCLSRKKVEELAAILQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMEEIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ C+++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICVVFYSKNDLKKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C GMCD+C
Sbjct: 388 FGEEYAKCNC-GMCDNC 403
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|383114099|ref|ZP_09934864.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|423294544|ref|ZP_17272671.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
gi|313694193|gb|EFS31028.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D2]
gi|392675735|gb|EIY69176.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL03T12C18]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|237719061|ref|ZP_04549542.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|293369500|ref|ZP_06616079.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|299148144|ref|ZP_07041206.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|336415756|ref|ZP_08596095.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|423292370|ref|ZP_17270948.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
gi|229451440|gb|EEO57231.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_2_4]
gi|292635385|gb|EFF53898.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CMC 3f]
gi|298512905|gb|EFI36792.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_23]
gi|335940635|gb|EGN02502.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus 3_8_47FAA]
gi|392661779|gb|EIY55352.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus CL02T12C04]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|89890375|ref|ZP_01201885.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
gi|89517290|gb|EAS19947.1| ATP-dependent DNA helicase RecQ [Flavobacteria bacterium BBFL7]
Length = 731
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/212 (35%), Positives = 109/212 (51%), Gaps = 34/212 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
FY+VR K Q D AD+ ++ +SGI+Y S K E+L + L+ G+ Y
Sbjct: 213 FYEVRPK-TGQVD-----ADITRFIKQHEGKSGIVYCLSRKRVEELAQVLQVNGIDAVPY 266
Query: 107 HAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 267 HAGLDAKTRVLHQDKFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ YY D+ KL + +Q+ G A L +V Y + + RR I
Sbjct: 327 AGRDGGEGHCLAYYSYKDIEKLEKFMAGKPIAEQEIGHALLQEMVGYA-ETSMSRRQFIL 385
Query: 204 SYFDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
YF E + G M D+ R + + V+
Sbjct: 386 HYFGEEFDPATGDGGDMDDNMRNPKPQKEAVE 417
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|160882388|ref|ZP_02063391.1| hypothetical protein BACOVA_00337 [Bacteroides ovatus ATCC 8483]
gi|156112201|gb|EDO13946.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus ATCC 8483]
Length = 749
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 234 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 289
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 290 GMDSLTRTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 349
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 350 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 408
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 409 FGEEYTEENC-GNCDNCLNPKK 429
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 314 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 343
>gi|423211952|ref|ZP_17198481.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
gi|295088062|emb|CBK69585.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens XB1A]
gi|392695316|gb|EIY88539.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens
CL03T12C04]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|281421757|ref|ZP_06252756.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
gi|281404252|gb|EFB34932.1| ATP-dependent DNA helicase RecQ [Prevotella copri DSM 18205]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 106/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K KD +D + R+ + +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRPK---NKD-IDRQIIMFIRQHKGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGICIAFYARKDLRKLEKFMENKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C CD+C
Sbjct: 386 FGEEYHEENCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|110597180|ref|ZP_01385469.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
gi|110341371|gb|EAT59836.1| ATP-dependent DNA helicase, RecQ family:ATP-dependent DNA helicase
RecQ [Chlorobium ferrooxidans DSM 13031]
Length = 597
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 101/202 (50%), Gaps = 31/202 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY VR K + L + + ++GIIY TS K D L+ RG R YHA
Sbjct: 198 FYDVRFKEKPDAQIVAIL-----KANKGKAGIIYRTSRKSVNDTAAMLQARGFRALPYHA 252
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L + +IAFG+GIDK N+RFVIH L KS+EN+YQE+GRAG
Sbjct: 253 GLSDDERKRNQEAFIRDEVEVIVATIAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAG 312
Query: 151 RDGQIAHCILYYRLPDV----FKLSSMV--FDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG+ AHC L + D+ F + SM+ ++ L L + S+ + CRR + +
Sbjct: 313 RDGEPAHCTLLFAQGDIPKVRFFIDSMLDETERARALDALTRVTSFA-STSVCRRITLLN 371
Query: 205 YFDEAWSDTECRGMCDHCRGGR 226
YF E + C G CD C G R
Sbjct: 372 YFGETYPHENC-GSCDICTGTR 392
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK N+RFVIH L KS+EN+YQ
Sbjct: 277 TIAFGMGIDKSNIRFVIHADLPKSIENYYQ 306
>gi|298480171|ref|ZP_06998369.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
gi|298273452|gb|EFI15015.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D22]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|282880882|ref|ZP_06289575.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
gi|281305264|gb|EFA97331.1| ATP-dependent DNA helicase RecQ [Prevotella timonensis CRIS 5C-B1]
Length = 725
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 110/208 (52%), Gaps = 31/208 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K + +D+ + R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEIRQKSSD----IDKQIIMFIRQHEGKSGIIYCLSRKKVEELSEVLKANNIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSVTRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGICIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC--RGGRRDAKR 231
F E + C CD+C RR+AK+
Sbjct: 386 FGEEYLQENCHS-CDNCLHPKERREAKQ 412
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|262408128|ref|ZP_06084675.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|294645124|ref|ZP_06722849.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294809724|ref|ZP_06768411.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|336403758|ref|ZP_08584467.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
gi|345508918|ref|ZP_08788536.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|229447212|gb|EEO53003.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D1]
gi|262353680|gb|EEZ02773.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_22]
gi|292639548|gb|EFF57841.1| ATP-dependent DNA helicase RecQ [Bacteroides ovatus SD CC 2a]
gi|294443058|gb|EFG11838.1| ATP-dependent DNA helicase RecQ [Bacteroides xylanisolvens SD CC
1b]
gi|335945112|gb|EGN06928.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_30]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLARTKNQDDFLMEKVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|399033938|ref|ZP_10732419.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
gi|398067770|gb|EJL59249.1| ATP-dependent DNA helicase RecQ [Flavobacterium sp. CF136]
Length = 703
Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats.
Identities = 75/193 (38%), Positives = 105/193 (54%), Gaps = 27/193 (13%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++PA D + ++ D + + N+SGIIY S K E+L E+L+ G+ AYHA LE
Sbjct: 206 LEVRPAL--DRVKQIIDFVENK-PNESGIIYCLSRKTTEELAEKLQKSGITAKAYHAGLE 262
Query: 112 SNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ + +IAFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 263 NKLRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 322
Query: 154 QIAHCILYYRLPDVFKL---SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
A +L+ DV +L +S + LA L + Y D CRR I+ SYF E
Sbjct: 323 LPAETVLFESYADVIQLQKFASEGLNSDVQLAKLDRMKQYA-DALSCRRKILLSYFGELV 381
Query: 211 SDTECRGMCDHCR 223
TE G CD C+
Sbjct: 382 --TENCGNCDICK 392
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 284 TIAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 313
>gi|312129258|ref|YP_003996598.1| ATP-dependent DNA helicase recq [Leadbetterella byssophila DSM
17132]
gi|311905804|gb|ADQ16245.1| ATP-dependent DNA helicase RecQ [Leadbetterella byssophila DSM
17132]
Length = 773
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 108/198 (54%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A+K +L +S+ R +SGI+Y S K+ E++ E L G + YHA
Sbjct: 212 YYEVRPKQNAKK----QLIKFVSQN-RGKSGIVYCLSRKKVEEIAELLNVNGFKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ V +IAFG+GIDKP+VRFV+H+ KS+E +YQE+GRAG
Sbjct: 267 GLDPEVRMKNQDAFLNENCDIVVATIAFGMGIDKPDVRFVVHYDAPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+++Y L D+ KL V ++ A L +V+Y CRR + SY
Sbjct: 327 RDGIDGTCLMFYALDDITKLEKFNKDKNVTERDNAKALLMEMVAYS-SLGVCRRRQLLSY 385
Query: 206 FDEAWSDTECRGMCDHCR 223
F E + +C G CD+C+
Sbjct: 386 FGEQM-EKDC-GFCDNCK 401
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVVHYDAPKSLEGYYQ 320
>gi|29349252|ref|NP_812755.1| ATP-dependent DNA helicase RecQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|380693604|ref|ZP_09858463.1| ATP-dependent DNA helicase RecQ [Bacteroides faecis MAJ27]
gi|383120164|ref|ZP_09940895.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
gi|29341160|gb|AAO78949.1| ATP-dependent DNA helicase recQ [Bacteroides thetaiotaomicron
VPI-5482]
gi|251837322|gb|EES65422.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 1_1_6]
Length = 726
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/202 (34%), Positives = 107/202 (52%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR A+ + +D+ + +SGIIY S K+ E+L E L+ G+ YHA
Sbjct: 211 YYEVR----AKTNNIDKDIIKFIKNNSEKSGIIYCLSRKKVEELAEILQANGINARPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSMTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCLTFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|73668704|ref|YP_304719.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
gi|72395866|gb|AAZ70139.1| ATP-dependent DNA helicase RecQ [Methanosarcina barkeri str.
Fusaro]
Length = 881
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 32/198 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ E+ D + RR R ++GIIY S E L ++L G R YHA
Sbjct: 215 YYEVRPK----KETFSEITDYL-RRHRGEAGIIYCQSRNSVEALTKKLNLAGFRALPYHA 269
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L +IAFG+GIDK NVRFVIH+ L +++E++YQE+GR G
Sbjct: 270 GLSDTERNRNQEMFIKDDVEIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETGRGG 329
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF------DQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG CIL++ D FK+ + ++ L L +V+YC + +CRR +
Sbjct: 330 RDGSPCECILFFSRGDRFKIEYFISQKTNEKEKDISLVQLRQMVAYC-EGNKCRRQTLME 388
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E S+ C G CD C
Sbjct: 389 YFGEELSEP-C-GNCDCC 404
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFVIH+ L +++E++YQ
Sbjct: 293 ATIAFGMGIDKSNVRFVIHYDLPRNLESYYQ 323
>gi|400597918|gb|EJP65642.1| RecQ family ATP-dependent DNA helicase [Beauveria bassiana ARSEF
2860]
Length = 478
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 93/178 (52%), Gaps = 28/178 (15%)
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------------- 114
+ R +N GIIYT S ECE L LR +G+ +HAKL +V
Sbjct: 264 LEERVKNVPGIIYTISRDECETLSAALRAQGIGARPFHAKLPKDVKEDTLNRWIHNEQGY 323
Query: 115 -----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D+ +
Sbjct: 324 DIIVATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDLER 383
Query: 170 LSSMV-FDQQTG------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
++ MV D + G L++L + YC + CR A I YF E EC CD
Sbjct: 384 VTRMVKGDPKDGTSYQARLSSLQALALYCENIKSCRHAEICKYFGET-EIPECDFACD 440
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQ 358
>gi|353234730|emb|CCA66752.1| related to RecQ family helicase RecQL1 [Piriformospora indica DSM
11827]
Length = 888
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 112/212 (52%), Gaps = 37/212 (17%)
Query: 47 ENF-YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLRE---ELRNRGLR 102
EN Y+V KPA+ ++ + + + ++++GI+Y S K+ E + E N ++
Sbjct: 343 ENLHYKVVPKPASSAAVIETMCNYILENHKDETGIVYCLSKKDAETVAAGLVETSNGKIK 402
Query: 103 VSAYHAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 144
YHA + +IAFGLGIDK +VRF++HH +SKS++ +YQ
Sbjct: 403 TGVYHADIPDARKEELHRRWRKGEVKVVCATIAFGLGIDKGDVRFILHHSMSKSLDGYYQ 462
Query: 145 ESGRAGRDGQIAHCILYYR-LPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
E+GRAGRDG+ + CILY R D +LSS+V ++ G + L++++ + D T CR+ A
Sbjct: 463 ETGRAGRDGKDSDCILYTRNAGDFSRLSSLVCGEKEGQSKLHDMLRFSQDLTECRKIQFA 522
Query: 204 SYF-------------DEAWSDTECRGMCDHC 222
YF D + T C G CD+C
Sbjct: 523 KYFSASSSLSVSVWSKDGSEDLTRC-GHCDNC 553
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRF++HH +SKS++ +YQ
Sbjct: 422 WRKGEVKVVCATIAFGLGIDKGDVRFILHHSMSKSLDGYYQ 462
>gi|391333104|ref|XP_003740962.1| PREDICTED: Bloom syndrome protein-like [Metaseiulus occidentalis]
Length = 1216
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 121/252 (48%), Gaps = 39/252 (15%)
Query: 11 LNLWRTSFYQVSIAFGLGIDKPNVRF-VIHHCLSKSMENFYQVRIKPAAQ--------KD 61
L R +F V I P+VR ++ L K + F Q +P +
Sbjct: 714 LGQLRQTFPGVPIMALTATASPSVRKDILKQLLMKEPKWFLQSFNRPNLRYQIVKYFSGS 773
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
+ + L+S ++ +SGI+Y S K+C+ +L + G+ +YHA +
Sbjct: 774 PVTHIIKLISNKYFEKSGIVYCLSRKDCDQTAAKLESAGISAVSYHAGMNDAERSSIQDM 833
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDK NVRFV H L KS+E +YQE+GRAGRDG + C+L+YR
Sbjct: 834 WINGRKHVVCATIAFGMGIDKANVRFVFHTGLPKSVEGYYQETGRAGRDGLPSDCVLFYR 893
Query: 164 LPDVFKLSSMVF--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
D + ++ ++ LANL+++V +C+++ C R +I YF + + C
Sbjct: 894 FADYIRWQKLITGGAETTASSRKIHLANLWHMVRFCMNEIDCIRKLILRYFGQEFDKKLC 953
Query: 216 ----RGMCDHCR 223
C++CR
Sbjct: 954 SVNFETTCENCR 965
>gi|120434956|ref|YP_860642.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
gi|117577106|emb|CAL65575.1| ATP-dependent DNA helicase RecQ [Gramella forsetii KT0803]
Length = 732
Score = 117 bits (293), Expect = 4e-24, Method: Composition-based stats.
Identities = 68/172 (39%), Positives = 96/172 (55%), Gaps = 26/172 (15%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+L + L+ G++ YHA L++ +IAF
Sbjct: 237 KSGIIYCLSRKKVEELAQTLQVNGIKAVPYHAGLDAKKRSKHQDMFLMEDIDVVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ +Y D+ KL
Sbjct: 297 GMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKP 356
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCR 223
V +Q+ G A L +V+Y + + RR I YF E +S G M D+ R
Sbjct: 357 VAEQEIGHALLQEVVAYA-ETSVSRRKFILHYFGEEFSSETGDGADMDDNVR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|449517902|ref|XP_004165983.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 106/194 (54%), Gaps = 32/194 (16%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--YHAKLESN---- 113
K+ L +L + RF+NQ GI+Y S EC ++ E L N+ ++ A YHA L +
Sbjct: 404 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETL-NKKFKIKAAYYHAGLAARQRVL 462
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQESGRAGRDG A CI
Sbjct: 463 VQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCI 522
Query: 160 LYYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
+ Y+ D ++ M+ + Q ++ + +C + +CRR ++ +F E++
Sbjct: 523 VLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDQCRRQMLLQHFGESFD 582
Query: 212 DTECR---GMCDHC 222
C+ CD+C
Sbjct: 583 RKACKYGSNPCDNC 596
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Q+ +IAFG+GIDKP+VRFVIH+ +SKS+E++YQ
Sbjct: 467 WHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQ 507
>gi|312384688|gb|EFR29358.1| hypothetical protein AND_01775 [Anopheles darlingi]
Length = 936
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/237 (32%), Positives = 112/237 (47%), Gaps = 56/237 (23%)
Query: 28 GIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIK 87
G D+PN+ F++ +P + L ++ L+ R S IIY + K
Sbjct: 159 GFDRPNLEFIV----------------RPKGSQGPLGDIQPLLGSGTREGSIIIYCLTRK 202
Query: 88 ECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRF 129
+ E++ E LR++G+ AYHA L +IAFG+GIDKP+VR
Sbjct: 203 QTEEIVELLRSKGIECEAYHAGLSVTKRRQVHEHFVRDRLQIIVATIAFGMGIDKPDVRL 262
Query: 130 VIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ------QTGLAN 183
VIH+ SK +E++YQE+GRAGRDGQ + C++++ D FK + Q Q L
Sbjct: 263 VIHYGASKDLESYYQEAGRAGRDGQPSRCVMFWSRAD-FKTHEFLRSQAGSGSVQHNLEQ 321
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWS--------------DTECRGMCDHC-RGG 225
L +S LD CRR I YF+ S D + R CD+C RGG
Sbjct: 322 LSRKMSEYLDTRDCRRRFILQYFEGTLSQIGNREKSAAQTAGDGKPRRCCDNCTRGG 378
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR VIH+ SK +E++YQ
Sbjct: 247 ATIAFGMGIDKPDVRLVIHYGASKDLESYYQ 277
>gi|197121298|ref|YP_002133249.1| ATP-dependent DNA helicase RecQ [Anaeromyxobacter sp. K]
gi|196171147|gb|ACG72120.1| ATP-dependent DNA helicase, RecQ family [Anaeromyxobacter sp. K]
Length = 595
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 24/177 (13%)
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------------- 114
+ R R QSGI+Y S + E+ E LR+ G+R AYHA LE +V
Sbjct: 305 LVRARRGQSGIVYALSRRSVEETAELLRDHGVRAGAYHAGLEPDVRARVQDEFQSGALEV 364
Query: 115 ---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLS 171
++AFG+GIDKP++RFVIH L +S+E +YQE GRAGRDG + C+L+Y DV
Sbjct: 365 VVATVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMSWD 424
Query: 172 SMVFDQQTGLANLYNIVSYCL----DQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
++ D + +A + ++ + D+ CR + +F E C CD C G
Sbjct: 425 RLLDDAEPEVAEVQRRMARSMFRLADEDGCRHERLVGWFGERID--PCGDACDRCTG 479
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQV---RIKPAAQKDCLD--ELADLMS 71
++AFG+GIDKP++RFVIH L +S+E +YQ + AQ DC+ AD+MS
Sbjct: 368 TVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMS 422
>gi|220916002|ref|YP_002491306.1| RecQ family ATP-dependent DNA helicase [Anaeromyxobacter
dehalogenans 2CP-1]
gi|219953856|gb|ACL64240.1| ATP-dependent DNA helicase, RecQ family [Anaeromyxobacter
dehalogenans 2CP-1]
Length = 595
Score = 117 bits (292), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 64/177 (36%), Positives = 93/177 (52%), Gaps = 24/177 (13%)
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------------- 114
+ R R QSGI+Y S + E+ E LR+ G+R AYHA LE +V
Sbjct: 305 LVRARRGQSGIVYALSRRSVEETAELLRDHGVRAGAYHAGLEPDVRARVQDEFQSGALEV 364
Query: 115 ---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLS 171
++AFG+GIDKP++RFVIH L +S+E +YQE GRAGRDG + C+L+Y DV
Sbjct: 365 VVATVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMSWD 424
Query: 172 SMVFDQQTGLANLYNIVSYCL----DQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
++ D + +A + ++ + D+ CR + +F E C CD C G
Sbjct: 425 RLLDDAEPEVAEVQRRMARSMFRLADEDGCRHERLVGWFGERID--PCGDACDRCTG 479
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 5/56 (8%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQV---RIKPAAQKDCLD--ELADLMS 71
++AFG+GIDKP++RFVIH L +S+E +YQ + AQ DC+ AD+MS
Sbjct: 367 ATVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMS 422
>gi|356533550|ref|XP_003535326.1| PREDICTED: LOW QUALITY PROTEIN: ATP-dependent DNA helicase Q-like
1-like [Glycine max]
Length = 612
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 104/196 (53%), Gaps = 30/196 (15%)
Query: 57 AAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKLESN-- 113
A K+ L +L L+ RFRNQ GI+Y S EC ++ + L + ++ YHA L +
Sbjct: 412 AKTKEPLKQLGQLLIDRFRNQCGIVYCLSKSECVEVSKFLNEKCKIKTVYYHAGLAARQR 471
Query: 114 ----------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQESGRAGRD +
Sbjct: 472 VAVQKKWYDGEVHIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDNFPSV 531
Query: 158 CILYYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
CI Y+ D ++ M+ + Q T +A + YC + CRR + +F E+
Sbjct: 532 CIALYQKKDFSRVVCMIRNGQGYKKESFKTAMAQAKKMQEYCEIKAECRRQTLLKHFGES 591
Query: 210 WSDTECR---GMCDHC 222
+ +C+ CD+C
Sbjct: 592 FDRKDCKYGSSPCDNC 607
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 29/31 (93%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQ
Sbjct: 488 ATIAFGMGIDKPDVRFVIHNTMSKSIESYYQ 518
>gi|21227319|ref|NP_633241.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
gi|20905673|gb|AAM30913.1| ATP-dependent DNA helicase [Methanosarcina mazei Go1]
Length = 896
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 109/222 (49%), Gaps = 35/222 (15%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
GL ID +V S +Y+VR K KD E+ D + R R ++GIIY
Sbjct: 211 LGLNIDPEKGPYVASFNRSNL---YYEVRPK----KDTFSEITDYLLRH-RGEAGIIYCQ 262
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
S E L +L G R YHA L + +IAFG+GI+K N
Sbjct: 263 SRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQEMFIRDDVDIIVATIAFGMGINKSN 322
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF------DQQTG 180
VRFVIH+ L +++E++YQE+GR GRDG CIL++ D FK+ + ++
Sbjct: 323 VRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEKDIS 382
Query: 181 LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L L +V+YC + +CRR + YF E S T C G CD C
Sbjct: 383 LVQLRQMVAYC-EGNKCRRQTLMEYFGEELS-TPC-GNCDTC 421
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+K NVRFVIH+ L +++E++YQ
Sbjct: 310 ATIAFGMGINKSNVRFVIHYDLPRNLESYYQ 340
>gi|189466850|ref|ZP_03015635.1| hypothetical protein BACINT_03226 [Bacteroides intestinalis DSM
17393]
gi|189435114|gb|EDV04099.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 602
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 113/215 (52%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS +++ YQ + K A D + R R +SGIIY S +
Sbjct: 196 DRPN--------LSLTVKRGYQQKEKSKAILDFIG--------RHRGESGIIYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ +GLRV+ YHA L S +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKQGLRVAVYHAGLSSVRRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + +L+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTKFATESGQQGINLEKLQRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF EA ++ +C G CD C+
Sbjct: 360 QYA-EADVCRRRILLSYFGEATTE-DC-GNCDVCK 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|373501519|ref|ZP_09591870.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
gi|371948172|gb|EHO66059.1| ATP-dependent DNA helicase RecQ [Prevotella micans F0438]
Length = 727
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 109/197 (55%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D +L + R+ +SGIIY S ++ E+L L+ ++ + YHA
Sbjct: 211 YYEVRPK-RSDEDTNRQLIRFI-RQHAGKSGIIYCLSRRKVEELAAVLQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDGFLMEEIDVIVATIAFGMGIDKPDVRFVIHYNIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI +Y D+ KL V +Q+ G L+ +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICITFYSQKDLKKLDKFMEGKPVAEQEIGRQLLHETEAYA-ESSVCRRRLLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C MCD+C
Sbjct: 388 FGEIYPNPNCE-MCDNC 403
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYNIPKSLEGYYQ 322
>gi|406883341|gb|EKD30951.1| hypothetical protein ACD_77C00439G0002 [uncultured bacterium]
Length = 733
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 38/201 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRF----RNQSGIIYTTSIKECEDLREELRNRGLRVS 104
+Y++R K +++ + RF +SGIIY S K+ ED+ + L G++
Sbjct: 213 YYEIRHKANTEREII---------RFIKANEGKSGIIYCLSRKKVEDVAQLLVVNGIKAL 263
Query: 105 AYHAKLE-----SN-------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L+ SN +IAFG+GIDKP+VRFVIH+ + KS+E++YQE+
Sbjct: 264 PYHAGLDAYTRASNQDSFLMEGVDVIVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQET 323
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GR+GRDG CI +Y D+ KL + +Q+ G L VSY + + CRR +
Sbjct: 324 GRSGRDGGEGQCIAFYSYKDIQKLEKFMQGKPISEQEIGRQLLMETVSYA-ESSICRRKV 382
Query: 202 IASYFDEAWSDTECRGMCDHC 222
+ +YF E + C G CD+C
Sbjct: 383 LLNYFGEDYKQDNC-GCCDNC 402
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRFVIHYDIPKSLESYYQ 321
>gi|373111502|ref|ZP_09525757.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|423131855|ref|ZP_17119530.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|423135590|ref|ZP_17123236.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|423330145|ref|ZP_17307945.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
gi|371640169|gb|EHO05774.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 10230]
gi|371640694|gb|EHO06290.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 101113]
gi|371640856|gb|EHO06450.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 12901]
gi|404602617|gb|EKB02313.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CCUG 3837]
Length = 731
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 111/210 (52%), Gaps = 30/210 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K K+ ++ + ++ + +SG+IY S K+ E++ L+ G+ YHA
Sbjct: 212 FYEIRPK---TKNVETDIIRFI-KQHQGKSGVIYCLSRKKVEEIANVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VR+VIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL V +Q+ G A L +V+Y + + RR I Y
Sbjct: 328 RDGGEGHCLAYYSYKDIEKLEKFMAGKPVAEQEIGYALLQEVVAYA-ETSMSRRKFILHY 386
Query: 206 FDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
F E + + G M D+ R + + D
Sbjct: 387 FGEEFDEVNGEGADMDDNIRNPKTKVEAKD 416
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHHDIPKSLESYYQ 321
>gi|86140388|ref|ZP_01058947.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
gi|85832330|gb|EAQ50779.1| putative ATP-dependent DNA helicase [Leeuwenhoekiella blandensis
MED217]
Length = 733
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 76/219 (34%), Positives = 109/219 (49%), Gaps = 46/219 (21%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQ--SGII 81
AF ++PN+ +Y++R K AD++ +NQ SGII
Sbjct: 202 AFKASFNRPNL--------------YYEIRPKTKNVD------ADIIRFVKQNQGKSGII 241
Query: 82 YTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGID 123
Y S K E+L + L+ G+ YHA L++ +IAFG+GID
Sbjct: 242 YCLSRKRVEELAQVLQVNGISAVPYHAGLDAKSRVKHQDMFLMEDVDVVVATIAFGMGID 301
Query: 124 KPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQ 178
KP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ YY D+ KL V +Q+
Sbjct: 302 KPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYSYKDIEKLEKFMSGKPVAEQE 361
Query: 179 TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
G A L +V+Y + + RR I YF E + + G
Sbjct: 362 IGHALLQEVVAYA-ETSMSRRKFILHYFGEEFDNETGEG 399
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|163787884|ref|ZP_02182330.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
gi|159876204|gb|EDP70262.1| putative ATP-dependent DNA helicase [Flavobacteriales bacterium
ALC-1]
Length = 733
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 79/241 (32%), Positives = 120/241 (49%), Gaps = 52/241 (21%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQ---- 77
++ F ++PN+ +Y+VR K AD++ RF Q
Sbjct: 200 AVTFKASFNRPNL--------------YYEVRPKTKNVD------ADII--RFVKQNDGK 237
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFG 119
SGI+Y S K E+L + L+ G++ YHA L++ +IAFG
Sbjct: 238 SGIVYCLSRKRVEELAQVLQVNGVKAVPYHAGLDAKTRVKHQDMFLMEDTDVVVATIAFG 297
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM-----V 174
+GIDKP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ YY D+ KL V
Sbjct: 298 MGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPV 357
Query: 175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCRGGRRDAKRV 232
+Q+ G A L +V++ + + RR I YF E +++ G M D+ R ++ +
Sbjct: 358 AEQEIGHALLQEVVAFA-ETSVSRRKFILHYFGEEFNNETGEGGDMDDNVRNPKKQVEAK 416
Query: 233 D 233
D
Sbjct: 417 D 417
>gi|384098146|ref|ZP_09999265.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
gi|383836292|gb|EID75705.1| ATP-dependent DNA helicase recQ [Imtechella halotolerans K1]
Length = 733
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 69/176 (39%), Positives = 96/176 (54%), Gaps = 26/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K E+L + L+ G+ YHA L++ +IAF
Sbjct: 237 KSGIIYCLSRKRVEELAQVLQVNGISAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ +Y DV KL
Sbjct: 297 GMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMSGKP 356
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCRGGRR 227
V +Q+ G A L IV+Y + + RR I YF E + + G M D+ R ++
Sbjct: 357 VAEQEIGHALLQEIVAYA-ETSMSRRKFILHYFGEEFDEVNGEGAEMDDNVRHPKK 411
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|452209801|ref|YP_007489915.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
gi|452099703|gb|AGF96643.1| ATP-dependent DNA helicase RecQ [Methanosarcina mazei Tuc01]
Length = 876
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 79/222 (35%), Positives = 109/222 (49%), Gaps = 35/222 (15%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
GL ID +V S +Y+VR K KD E+ D + R R ++GIIY
Sbjct: 191 LGLNIDPEKGPYVASFNRSNL---YYEVRPK----KDTFSEITDYLLRH-RGEAGIIYCQ 242
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
S E L +L G R YHA L + +IAFG+GI+K N
Sbjct: 243 SRNNVETLTRKLNLAGFRALPYHAGLSDSERSRNQEMFIRDDVDIIVATIAFGMGINKSN 302
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF------DQQTG 180
VRFVIH+ L +++E++YQE+GR GRDG CIL++ D FK+ + ++
Sbjct: 303 VRFVIHYDLPRNLESYYQETGRGGRDGSPCECILFFSRGDRFKIEYFIAQKTNEKEKDIS 362
Query: 181 LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L L +V+YC + +CRR + YF E S T C G CD C
Sbjct: 363 LVQLRQMVAYC-EGNKCRRQTLMEYFGEELS-TPC-GNCDTC 401
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+K NVRFVIH+ L +++E++YQ
Sbjct: 290 ATIAFGMGINKSNVRFVIHYDLPRNLESYYQ 320
>gi|372223763|ref|ZP_09502184.1| RecQ familyATP-dependent DNA helicase [Mesoflavibacter
zeaxanthinifaciens S86]
Length = 733
Score = 117 bits (292), Expect = 6e-24, Method: Composition-based stats.
Identities = 78/204 (38%), Positives = 105/204 (51%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
FY+VR K AD++ RF Q SGI+Y S K+ E+L + L+ G+
Sbjct: 213 FYEVRPKTKNVD------ADII--RFVKQNSGKSGIVYCLSRKKVEELAQVLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA ++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGFDAKTRAKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ YY DV KL V +Q+ G A L IV+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAYYAYKDVEKLEKFMSGKPVAEQEIGQALLQEIVAYA-ETSMSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + G M D+ R
Sbjct: 384 ILHYFGEEFDAVNGEGADMDDNAR 407
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|270295711|ref|ZP_06201911.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
gi|270273115|gb|EFA18977.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. D20]
Length = 727
Score = 117 bits (292), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 31/203 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A +D + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDRDIIK-----FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKALLH 385
Query: 205 YFDEAWSDTECRGMCDHCRGGRR 227
YF E + + C G CD+C ++
Sbjct: 386 YFGEEYMEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|393785533|ref|ZP_10373683.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
gi|392662288|gb|EIY55852.1| ATP-dependent DNA helicase RecQ [Bacteroides salyersiae CL02T12C01]
Length = 726
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 73/202 (36%), Positives = 105/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D R +SGIIY S K+ E+L E L+ G+ AYHA
Sbjct: 211 YYEVRPKTAN----IDRDIIKFIRNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGRCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E + + C G CD+C ++
Sbjct: 386 FGEEYLEDNC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|347536603|ref|YP_004844028.1| ATP-dependent DNA helicase RecQ [Flavobacterium branchiophilum
FL-15]
gi|345529761|emb|CCB69791.1| ATP-dependent DNA helicase RecQ3 [Flavobacterium branchiophilum
FL-15]
Length = 702
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 108/193 (55%), Gaps = 27/193 (13%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++PA D + ++ + ++ +++GIIY S K E+L E+L+++G+ AYHA L+
Sbjct: 206 LEVRPAL--DRVKQIVQFIDKK-ADEAGIIYCLSRKTTEELSEKLQSKGISAMAYHAGLD 262
Query: 112 SN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
++ ++AFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 263 NHNRTKVQDAFINDTCQVVCATVAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 322
Query: 154 QIAHCILYYRLPDVFKLSSMVFDQQTG---LANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
Q A IL+ DV +L + Q LA L + + D CRR I+ SYF E
Sbjct: 323 QPAETILFQSYGDVIQLQKFALEAQNAEIQLAKLDRMKQFA-DAQSCRRKILLSYFGELV 381
Query: 211 SDTECRGMCDHCR 223
S+ C G CD C+
Sbjct: 382 SEN-C-GNCDVCK 392
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 284 TVAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 313
>gi|387793516|ref|YP_006258581.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
gi|379656349|gb|AFD09405.1| ATP-dependent DNA helicase RecQ [Solitalea canadensis DSM 3403]
Length = 705
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 22/172 (12%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
NQSGIIY S K E+L E+LR + +AYHA + ++ ++A
Sbjct: 229 NQSGIIYCLSRKTTEELAEKLREHQVNAAAYHAGMSADDRNETQEDFINDRVQVVCATVA 288
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
FG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG + ILYY L D+ L+
Sbjct: 289 FGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDGLESETILYYNLVDIVLLTQFAEQS 348
Query: 178 QTGLANLYNI--VSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
Q NL + + + CRR I+ +YF E + D+ C G CD C+ R+
Sbjct: 349 QQRELNLEKLKRIQQFAEADICRRKILINYFGENFEDS-C-GNCDVCKNPRK 398
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 286 TVAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 315
>gi|374287671|ref|YP_005034756.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
gi|301166212|emb|CBW25787.1| ATP-dependent DNA helicase [Bacteriovorax marinus SJ]
Length = 605
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 75/227 (33%), Positives = 121/227 (53%), Gaps = 43/227 (18%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPA--AQKDCLDELADLMSRRFRNQSGI 80
IA+ L +++PN+ + +F + IK + ++D + +L + +S+ +GI
Sbjct: 191 IAYQLKMEEPNIY----------ISSFDRSNIKYSILEREDEIKQLDEFISKNHAGDTGI 240
Query: 81 IYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGI 122
+Y S K+ E + ++L+ RG AYHA L +N ++AFG+GI
Sbjct: 241 VYCLSRKKVESVSKKLKERGHHSFAYHAGLSANERDFVQKAFNNDDGIIIVATVAFGMGI 300
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD------ 176
D+P+VRFV H L KS+E++YQE+GRAGRDGQ A+ + Y L DV K S M+
Sbjct: 301 DRPDVRFVAHLDLPKSVESYYQETGRAGRDGQAANAWMVYGLQDVIKHSHMLETTEASEH 360
Query: 177 -QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ L +++S C + T+CRR + YF+E E CD+C
Sbjct: 361 YKKVAREKLDSMLSIC-ETTKCRRNFLLQYFEE-----ESSPKCDNC 401
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GID+P+VRFV H L KS+E++YQ
Sbjct: 292 ATVAFGMGIDRPDVRFVAHLDLPKSVESYYQ 322
>gi|449454038|ref|XP_004144763.1| PREDICTED: ATP-dependent DNA helicase Q-like 1-like [Cucumis
sativus]
Length = 601
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/194 (35%), Positives = 105/194 (54%), Gaps = 32/194 (16%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--YHAKLESN---- 113
K+ L +L + RF+NQ GI+Y S EC ++ E L N+ ++ A YHA L +
Sbjct: 404 KEPLVQLGQFIKERFKNQCGIVYCLSKSECVEVSETL-NKKFKIKAAYYHAGLAARQRVL 462
Query: 114 --------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCI 159
+IAFG+GIDKP+VRFVIH+ +SKS+E++YQESGRAGRDG A CI
Sbjct: 463 VQKKWHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQESGRAGRDGYPASCI 522
Query: 160 LYYRLPDVFKLSSMVFDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWS 211
+ Y+ D ++ M+ + Q ++ + +C + CRR ++ +F E++
Sbjct: 523 VLYQKKDFSRVVCMLRNAQGFKSESFKMSMSQGKKMQQFCELKDECRRQMLLQHFGESFD 582
Query: 212 DTECR---GMCDHC 222
C+ CD+C
Sbjct: 583 RKACKYGSNPCDNC 596
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/41 (56%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W Q+ +IAFG+GIDKP+VRFVIH+ +SKS+E++YQ
Sbjct: 467 WHVGDIQIVCATIAFGMGIDKPDVRFVIHNTMSKSIESYYQ 507
>gi|391232165|ref|ZP_10268371.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
gi|391221826|gb|EIQ00247.1| ATP-dependent DNA helicase RecQ [Opitutaceae bacterium TAV1]
Length = 620
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 71/198 (35%), Positives = 104/198 (52%), Gaps = 29/198 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P Q L ++ D + +R ++SGIIY + E E L +RG YHA L +
Sbjct: 207 RVLPKDQP--LKQIIDFVKKR-EDESGIIYCATRATAEKTAESLASRGYAARPYHAGLSA 263
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+ +IAFG+GI+KPNVR+VIHH L K++E +YQE+GRAGRDG
Sbjct: 264 DDRSANQELFLRDDVKIICATIAFGMGINKPNVRWVIHHDLPKNIEGYYQETGRAGRDGL 323
Query: 155 IAHCILYYRLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDE 208
A C+L Y D+ K + + +QQ L ++S+ + T CRR + YF E
Sbjct: 324 PADCLLLYSAGDIVKQTHFIDEITDAHEQQVARRQL-RLMSHYAEDTTCRRRTLLDYFGE 382
Query: 209 AWSDTECRGMCDHCRGGR 226
++ C G CD+C+ R
Sbjct: 383 TFAIDNC-GACDNCQEPR 399
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVR+VIHH L K++E +YQ
Sbjct: 283 ATIAFGMGINKPNVRWVIHHDLPKNIEGYYQ 313
>gi|359783323|ref|ZP_09286538.1| ATP-dependent DNA helicase RecQ [Pseudomonas psychrotolerans L19]
gi|359368750|gb|EHK69326.1| ATP-dependent DNA helicase RecQ [Pseudomonas psychrotolerans L19]
Length = 712
Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 77/218 (35%), Positives = 113/218 (51%), Gaps = 47/218 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ FY++ K + +K L LA+ R +GI+Y S K+
Sbjct: 201 DRPNI--------------FYRIVPKESPRKQLLAFLAER-----RGDAGIVYCMSRKKV 241
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
E++ E+L N+G YHA L ++V +IAFG+GIDKPNVRFV
Sbjct: 242 EEVAEQLSNQGFPALPYHAGLPNDVRAANQKRFLNEEGLIMVATIAFGMGIDKPNVRFVA 301
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANL 184
H L KS+E +YQE+GRAGRDG A + Y L DV L M+ + ++ L
Sbjct: 302 HLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLLLRQMMQNSEGDERHKRIERHKL 361
Query: 185 YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+++ C ++TRCRR ++ +YFD+ C G CD+C
Sbjct: 362 EAMLALC-EETRCRRQVLLAYFDDHLPQP-C-GHCDNC 396
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFV H L KS+E +YQ
Sbjct: 285 TIAFGMGIDKPNVRFVAHLDLPKSLEAYYQ 314
>gi|332878105|ref|ZP_08445835.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|357047651|ref|ZP_09109249.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
gi|332684067|gb|EGJ56934.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. oral taxon 329
str. F0087]
gi|355529339|gb|EHG98773.1| ATP-dependent DNA helicase RecQ [Paraprevotella clara YIT 11840]
Length = 727
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/197 (37%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + +R +SGIIY S K E+L E LR + AYHA
Sbjct: 211 YYEVRNK---TKNVDKDIIRFIKQR-PGKSGIIYALSRKRVEELAEILRANDINARAYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSATRSQTQDDFIMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI YY D+ KL V +Q G L +Y + + CRR + Y
Sbjct: 327 RDGGEGLCITYYTYKDLQKLEKFMEGKPVAEQDIGRQLLSETAAYA-ESSVCRRKFLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C G CD+C
Sbjct: 386 FGEEYHEENC-GNCDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|403369477|gb|EJY84584.1| hypothetical protein OXYTRI_17569 [Oxytricha trifallax]
Length = 1341
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 107/202 (52%), Gaps = 28/202 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL-RNRGLRVSAYH 107
Y++R K K+ +++ +++ RF+ + GIIY S KEC+ L E L RN ++ YH
Sbjct: 465 LYEIRDKKQF-KNVTEDIVNMLRTRFKGKCGIIYCISRKECQKLSEILKRNYHIKCDYYH 523
Query: 108 AKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A++ N +IAFG+GI+K +VRFVIH+ + KS+E + QE GRA
Sbjct: 524 AEVSYNQRKDIQERWMKNEIQIIIATIAFGMGINKKDVRFVIHYSMPKSLEGYVQECGRA 583
Query: 150 GRDGQIAHCILYYRLPDVFKLSSMVFD--------QQTGLANLYNIVSYCLDQTRCRRAI 201
GRD + CILYY+ D + + + + LY+I+ YC + CRR +
Sbjct: 584 GRDQNKSECILYYQYGDRKRNDFFILTNNDNTRTRKNENVHALYSILEYCEEPYYCRRQL 643
Query: 202 IASYFDEAWSDTECRGMCDHCR 223
+ E + ++C MCD+CR
Sbjct: 644 QLQFLGEKFDPSKCNKMCDNCR 665
Score = 43.9 bits (102), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W + Q+ +IAFG+GI+K +VRFVIH+ + KS+E + Q
Sbjct: 538 WMKNEIQIIIATIAFGMGINKKDVRFVIHYSMPKSLEGYVQ 578
>gi|403419682|emb|CCM06382.1| predicted protein [Fibroporia radiculosa]
Length = 1116
Score = 116 bits (291), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 68/202 (33%), Positives = 104/202 (51%), Gaps = 33/202 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSA--Y 106
FY++R K K + ++ D + + N++GIIY S K CE+L + LR++ R+ A Y
Sbjct: 593 FYEIRSK----KGYIKDMVDFIVTQHSNETGIIYCQSRKSCEELAKTLRDQ-YRLDALHY 647
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA + S ++AFG+G+DKP+VRFVIH L ++ +YQE+GR
Sbjct: 648 HAGMISADRKDVQARWQTGRCKIIVATVAFGMGVDKPDVRFVIHRDLPNDLDGYYQETGR 707
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LANLYNIVSYCLDQTRCRRA 200
AGRDG+ A C+LYY D + D + L +V YC + CRR
Sbjct: 708 AGRDGKPADCLLYYSYGDAISRRRQIRDNRDTNHQEKSHQEEELQRVVQYCQNDVDCRRT 767
Query: 201 IIASYFDEAWSDTECRGMCDHC 222
+ +Y+ E + +C CD+C
Sbjct: 768 QVLAYYSEQFDHRKCHLGCDNC 789
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 29/41 (70%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+T ++ ++AFG+G+DKP+VRFVIH L ++ +YQ
Sbjct: 663 WQTGRCKIIVATVAFGMGVDKPDVRFVIHRDLPNDLDGYYQ 703
>gi|410658874|ref|YP_006911245.1| ATP-dependent DNA helicase RecQ [Dehalobacter sp. DCA]
gi|410661860|ref|YP_006914231.1| ATP-dependent DNA helicase RecQ [Dehalobacter sp. CF]
gi|409021229|gb|AFV03260.1| ATP-dependent DNA helicase RecQ [Dehalobacter sp. DCA]
gi|409024216|gb|AFV06246.1| ATP-dependent DNA helicase RecQ [Dehalobacter sp. CF]
Length = 596
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 118/236 (50%), Gaps = 51/236 (21%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F G D+PN++F + +K + F Q R+ R R+ SGIIY
Sbjct: 197 FITGFDRPNLKFSVLRGENKKV--FVQNRL-----------------RNNRDDSGIIYAA 237
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
+ K+ + L + L+ +G V YHA L + AFG+GIDK N
Sbjct: 238 TRKDVDRLYKLLKGQGFSVGCYHAGLPDQERKRNQEKFIYDEIAVMVATNAFGMGIDKSN 297
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD----QQTGLA 182
VRFVIH+ + K++E++YQE+GRAGRDG+ A C L + DV ++ M+ + Q+ +A
Sbjct: 298 VRFVIHYNMPKNIESYYQEAGRAGRDGEPAECFLLFGPQDV-QIQKMMIEETIFQEQRVA 356
Query: 183 NLYN----IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
N Y +V YC +RC R I YF E S +CR C +C D K+VDV
Sbjct: 357 NEYKKLQAMVDYC-HTSRCLRQTILEYFGETESPDKCRN-CSNCDD---DRKKVDV 407
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 25/28 (89%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
AFG+GIDK NVRFVIH+ + K++E++YQ
Sbjct: 288 AFGMGIDKSNVRFVIHYNMPKNIESYYQ 315
>gi|449457093|ref|XP_004146283.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
gi|449511185|ref|XP_004163888.1| PREDICTED: ATP-dependent DNA helicase Q-like 4A-like, partial
[Cucumis sativus]
Length = 1269
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/204 (32%), Positives = 101/204 (49%), Gaps = 41/204 (20%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH------------ 107
K C+D++ + ++ GI+Y S +CE + E L+ G + + YH
Sbjct: 721 KKCVDDIDKFIKENHFDECGIVYCLSRMDCEKVAERLQECGHKAAFYHGSMDPAQRSFIQ 780
Query: 108 ---AKLESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+K E N+ ++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDG + C+LY
Sbjct: 781 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGLRSSCVLY 840
Query: 162 YRLPDVFKLSSMVFDQ-----------------------QTGLANLYNIVSYCLDQTRCR 198
Y D ++ M+ +T NL +VSYC + CR
Sbjct: 841 YSYSDYIRVKHMISQGATEQSPLVSGYNRTNLGSSGRILETNTENLLRMVSYCENDVDCR 900
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R + +F E + C+ CD+C
Sbjct: 901 RLLQLVHFGEKFDPGNCKKTCDNC 924
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 793 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 823
>gi|225011808|ref|ZP_03702246.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
gi|225004311|gb|EEG42283.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-2A]
Length = 729
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 112/206 (54%), Gaps = 34/206 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K Q D +D++ ++ +SGIIY S K E+L + L+ G+ Y
Sbjct: 211 YYEVRPK-TGQVD-----SDIIRFIKQNSGKSGIIYCLSRKRVEELAQTLQVNGINALPY 264
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L+S +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 265 HAGLDSKSRVNNQDQFLKDDCDVIVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 324
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ +Y D+ KL + +Q+ G+A L ++V+Y + + RR I
Sbjct: 325 AGRDGGEGHCLAFYAYKDIEKLEKFMSGKPLAEQEIGMALLADMVAYA-ETSLSRRKFIL 383
Query: 204 SYFDEAWSDTECRG--MCDHCRGGRR 227
YF E + + G M D+ R ++
Sbjct: 384 HYFGEEFDNETGDGGEMDDNMRFPKK 409
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 320
>gi|224535963|ref|ZP_03676502.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|423226021|ref|ZP_17212487.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|224522418|gb|EEF91523.1| hypothetical protein BACCELL_00827 [Bacteroides cellulosilyticus
DSM 14838]
gi|392630878|gb|EIY24859.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 727
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 236 KSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAF 295
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 296 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKP 355
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E + + C G CD+C ++
Sbjct: 356 VAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYMEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|393789452|ref|ZP_10377573.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
gi|392650900|gb|EIY44566.1| ATP-dependent DNA helicase RecQ [Bacteroides nordii CL02T12C05]
Length = 726
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 97/179 (54%), Gaps = 25/179 (13%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV----------------- 114
R +SGIIY S K+ E+L E L+ G+ AYHA ++S
Sbjct: 230 RNNPEKSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIV 289
Query: 115 -SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
+IAFG+GIDKP+VR+V+H+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 290 ATIAFGMGIDKPDVRYVMHYDIPKSLEGYYQETGRAGRDGGEGKCITFYTNKDLQKLEKF 349
Query: 174 -----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E +++ C G CD+C ++
Sbjct: 350 MQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYTEDNC-GNCDNCLNPKK 406
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+V+H+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVMHYDIPKSLEGYYQ 320
>gi|163756913|ref|ZP_02164021.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
gi|161323149|gb|EDP94490.1| putative ATP-dependent DNA helicase [Kordia algicida OT-1]
Length = 732
Score = 116 bits (291), Expect = 7e-24, Method: Composition-based stats.
Identities = 76/211 (36%), Positives = 110/211 (52%), Gaps = 33/211 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ--SGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K D AD++ +NQ SGI+Y S K E+L + L+ G+ Y
Sbjct: 213 YYEVRPKTK------DVDADIIRFIKQNQGKSGIVYCLSRKRVEELAQVLQVNGINAVPY 266
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L+ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 267 HAGLDPKKRAKHQDMFLMEDCDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG HC+ +Y D+ KL V +Q+ G A L +V+Y + + RR I
Sbjct: 327 AGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAEQEIGHALLQEVVAYA-ETSISRRKFIL 385
Query: 204 SYFDEAWSDT-ECRGMCDHCRGGRRDAKRVD 233
YF E + + E M D+ R ++ + D
Sbjct: 386 HYFGEEFPENGEGADMDDNVRNPKKKVEAQD 416
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|20093292|ref|NP_619367.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
gi|19918649|gb|AAM07847.1| DNA helicase RecQ [Methanosarcina acetivorans C2A]
Length = 909
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 103/198 (52%), Gaps = 32/198 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K KD E+ D + R R ++GIIY S E L ++L G R YHA
Sbjct: 232 YYEVRPK----KDTFSEITDYL-LRHRGEAGIIYCQSRNNVETLTKKLNLAGFRALPYHA 286
Query: 109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L + +IAFG+GIDK NVRFVIH+ L +++E++YQE+GR G
Sbjct: 287 GLSDSERSRNQEMFIKDDVDIIVATIAFGMGIDKSNVRFVIHYDLPRNLESYYQETGRGG 346
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVF------DQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG CIL++ D FK+ + ++ L L +V+YC + +CRR +
Sbjct: 347 RDGSPCECILFFSRGDRFKIEYFIAQKTNEKEKDISLVQLRQMVAYC-EGNKCRRQALLE 405
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E S + C G CD C
Sbjct: 406 YFGEELSAS-C-GNCDTC 421
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFVIH+ L +++E++YQ
Sbjct: 310 ATIAFGMGIDKSNVRFVIHYDLPRNLESYYQ 340
>gi|373461301|ref|ZP_09553043.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
gi|371952855|gb|EHO70688.1| ATP-dependent DNA helicase RecQ [Prevotella maculosa OT 289]
Length = 725
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 102/197 (51%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K D +D+ R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRQK----SDEVDKQIIKFIRQHEGKSGIIYCLSRKKVEELSEVLKANEIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y CRR ++ Y
Sbjct: 327 RDGGEGLCIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYATSSV-CRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C CD+C
Sbjct: 386 FGEEYTQDNCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|171688896|ref|XP_001909388.1| hypothetical protein [Podospora anserina S mat+]
gi|170944410|emb|CAP70520.1| unnamed protein product [Podospora anserina S mat+]
Length = 483
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 83/242 (34%), Positives = 111/242 (45%), Gaps = 51/242 (21%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKS----------MENFYQVRIKPAAQKDCLDELADLMSRR 73
AF + +PN+ + ++ ++ Y+ R KP +K LDE M R
Sbjct: 210 AFTMSAFRPNLHLEVRFTSDQTDDRYDDFVSWLKGVYERRGKPD-RKPELDE----MGER 264
Query: 74 FRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------------- 113
N SGIIYTTS ECE L LR+ + +HAKL +
Sbjct: 265 VENVSGIIYTTSRDECESLAASLRSHDIAARPFHAKLANQDKERTLQKWIRNEVGYDIIV 324
Query: 114 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
+ AFG+GIDK +VRFV+H L KS E +YQE+GRAGRDG+ ++C LYY D ++ M
Sbjct: 325 ATTAFGMGIDKDDVRFVVHWRLPKSFEGYYQEAGRAGRDGKASYCFLYYSREDRDRVCGM 384
Query: 174 VFDQQT--------GLANL-------YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM 218
+ T G AN +V YC D CR A I YF E +C
Sbjct: 385 IVKDNTSGDRRDKGGEANKRARMESHEALVRYCEDTGGCRHAAITKYFGEK-EVPKCDFA 443
Query: 219 CD 220
CD
Sbjct: 444 CD 445
>gi|160890574|ref|ZP_02071577.1| hypothetical protein BACUNI_03017 [Bacteroides uniformis ATCC 8492]
gi|317479884|ref|ZP_07939001.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|423304003|ref|ZP_17282002.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|423307273|ref|ZP_17285263.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
gi|156859573|gb|EDO53004.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis ATCC 8492]
gi|316903958|gb|EFV25795.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_1_36]
gi|392685931|gb|EIY79239.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T00C23]
gi|392690525|gb|EIY83788.1| ATP-dependent DNA helicase RecQ [Bacteroides uniformis CL03T12C37]
Length = 727
Score = 116 bits (291), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 72/203 (35%), Positives = 106/203 (52%), Gaps = 31/203 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
+Y+VR K A +D + + +SGIIY S K+ E+L E L+ G+ AYH
Sbjct: 212 YYEVRPKTANVDRDIIK-----FIKNNPEKSGIIYCLSRKKVEELAEILQANGINARAYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A ++S +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGMDSATRTQNQDDFLMEKIDVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + + CRR +
Sbjct: 327 GRDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKALLH 385
Query: 205 YFDEAWSDTECRGMCDHCRGGRR 227
YF E + + C G CD+C ++
Sbjct: 386 YFGEEYIEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|194332913|ref|YP_002014773.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM
271]
gi|194310731|gb|ACF45126.1| ATP-dependent DNA helicase RecQ [Prosthecochloris aestuarii DSM
271]
Length = 617
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/243 (33%), Positives = 118/243 (48%), Gaps = 35/243 (14%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
+A T Q I LG+ P FV+ + Y VR K + ++L
Sbjct: 178 VAAFTATATHKVQADILRKLGLRDP---FVVRASFDRPNLT-YDVRFK----DNVSEQLV 229
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL---------------ES 112
L+ + ++GIIY TS K + L+ +G R YHA L E+
Sbjct: 230 GLL-KSSPGKAGIIYRTSRKSVNETTAMLQAKGFRALPYHAGLGDEERKKNQETFIRDEA 288
Query: 113 NV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+V ++AFG+GIDK N+RFVIH L KS+EN+YQE+GRAGRDG+ AHC L + D+ K
Sbjct: 289 DVIVATVAFGMGIDKSNIRFVIHADLPKSIENYYQETGRAGRDGEPAHCTLLFSQGDIPK 348
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + ++ L L +VS+ + CRR + YF E++ C G CD C
Sbjct: 349 VRFFIDTIIDETERNKALDALQRVVSFA-STSVCRRITLLDYFGESYPKENC-GSCDICL 406
Query: 224 GGR 226
G R
Sbjct: 407 GTR 409
>gi|182415498|ref|YP_001820564.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
gi|177842712|gb|ACB76964.1| ATP-dependent DNA helicase RecQ [Opitutus terrae PB90-1]
Length = 612
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/194 (37%), Positives = 102/194 (52%), Gaps = 29/194 (14%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P Q L ++ D + +R ++SGIIY S E L E L RG YHA L +
Sbjct: 211 RVIPKDQP--LKQIIDFVRKR-EDESGIIYCASRAAAERLAESLAGRGFSAKPYHAGLTA 267
Query: 113 N------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
+ +IAFG+GI+KPNVR+VIHH L K++E +YQE+GRAGRDG
Sbjct: 268 DERTRHQEEFLRDDARIVCATIAFGMGINKPNVRWVIHHDLPKNIEGYYQETGRAGRDGL 327
Query: 155 IAHCILYYRLPDVFK----LSSMVFDQQTGLA--NLYNIVSYCLDQTRCRRAIIASYFDE 208
C+L + D+ K L + +Q+ +A L IV Y + CRRA + +YF E
Sbjct: 328 PGDCLLLFSAGDIAKQLHFLDEITDEQEQQIARTQLRKIVHYA-ESAGCRRAELLAYFGE 386
Query: 209 AWSDTECRGMCDHC 222
+ C G CD+C
Sbjct: 387 TFGVDNC-GACDNC 399
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVR+VIHH L K++E +YQ
Sbjct: 287 ATIAFGMGINKPNVRWVIHHDLPKNIEGYYQ 317
>gi|333381389|ref|ZP_08473071.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
gi|332830359|gb|EGK02987.1| ATP-dependent DNA helicase RecQ [Dysgonomonas gadei ATCC BAA-286]
Length = 731
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 107/210 (50%), Gaps = 31/210 (14%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR K KD + + + ++SGIIY S K+ E+ E L+ + YH
Sbjct: 212 FYEVRSKTNNVDKDIIKYI-----KSQGHKSGIIYCLSRKKVEEFAEILQTNNINALPYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L++N +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRA
Sbjct: 267 AGLDANTRSANQDAFLMEQVDVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG CI +Y D+ KL V +Q+ G L +Y + CR+ ++
Sbjct: 327 GRDGGEGKCIAFYSFKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ETALCRKKVLLH 385
Query: 205 YFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
YF E + C G CD+C ++ + D+
Sbjct: 386 YFGEEYKVRNC-GNCDNCVNPKKQVEAKDL 414
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDMPKSLEGYYQ 321
>gi|409195579|ref|ZP_11224242.1| putative ATP-dependent DNA helicase [Marinilabilia salmonicolor JCM
21150]
Length = 726
Score = 116 bits (290), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 30/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K A ++ + L + +S IIY S K+ E+L E L G++ YHA
Sbjct: 211 FYEVRPKVNATREIIKIL-----KENTGKSAIIYCLSRKKVEELAETLVVNGIKALPYHA 265
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VR VIH+ + KS+E +YQE+GRAG
Sbjct: 266 GMDAATRSGNQDKFLMEEIDVIVATIAFGMGIDKPDVRIVIHYDIPKSLEGYYQETGRAG 325
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL + +Q+ G L V+Y + + CRR ++ Y
Sbjct: 326 RDGGEGRCIAFYSYKDIQKLEKFMQGKPLAEQEIGKQLLLETVAYA-ESSVCRRKMLLHY 384
Query: 206 FDEAWSDTECRGMCDHC 222
F E +++ C CD+C
Sbjct: 385 FGETYTEENC-STCDNC 400
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR VIH+ + KS+E +YQ
Sbjct: 290 TIAFGMGIDKPDVRIVIHYDIPKSLEGYYQ 319
>gi|408370738|ref|ZP_11168512.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
gi|407743730|gb|EKF55303.1| ATP-dependent DNA helicase recq [Galbibacter sp. ck-I2-15]
Length = 733
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 100/182 (54%), Gaps = 26/182 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L + L G++ YHA L++ +IAF
Sbjct: 237 KSGIIYCLSRKKVEELAQTLEVNGIKAVPYHAGLDAKTRAKHQDMFLMEDVDVVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ +Y D+ KL
Sbjct: 297 GMGIDKPDVRFVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKP 356
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCRGGRRDAKR 231
V +Q+ G A L ++V+Y + + RR I YF E + G M D+ R ++ +
Sbjct: 357 VAEQEIGHALLQDMVAYA-ETSMSRRMYILHYFGEEFDPVTGEGASMDDNVRYPKKKREA 415
Query: 232 VD 233
+D
Sbjct: 416 MD 417
>gi|225010696|ref|ZP_03701166.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
gi|225005249|gb|EEG43201.1| ATP-dependent DNA helicase, RecQ family [Flavobacteria bacterium
MS024-3C]
Length = 647
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 109/208 (52%), Gaps = 38/208 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
FY+VR P Q + AD++ RF Q SGIIY S K+ E+L + L+ G+
Sbjct: 213 FYEVR--PKTQ----NVEADII--RFVKQHVGKSGIIYCLSRKKVEELAQILQVNGVSAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA ++ +IAFG+GIDKP+VR+VIHH + KS+E++YQE+
Sbjct: 265 PYHAGFDTKTRSKYQDMFLMEEVDVVVATIAFGMGIDKPDVRYVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y DV KL V +Q+ G A L IV + + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDVEKLEKFMAGKPVAEQEIGNALLQEIVGFA-ETSISRRKF 383
Query: 202 IASYFDEAWSDT--ECRGMCDHCRGGRR 227
I YF E + + E GM D+ R +
Sbjct: 384 ILHYFGEDFDEVHGEGAGMDDNSRNPKE 411
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRYVIHHDIPKSIESYYQ 322
>gi|189463687|ref|ZP_03012472.1| hypothetical protein BACINT_00018 [Bacteroides intestinalis DSM
17393]
gi|189438637|gb|EDV07622.1| ATP-dependent DNA helicase RecQ [Bacteroides intestinalis DSM
17393]
Length = 727
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K+ E+L E L+ G+ AYHA ++S +IAF
Sbjct: 236 KSGIIYCLSRKKVEELAEILQANGINARAYHAGMDSATRTQNQDDFLMEKIDVIVATIAF 295
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 296 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCITFYTNKDLQKLEKFMQGKP 355
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR + YF E + + C G CD+C ++
Sbjct: 356 VAEQEIGKQLLLETAAYA-ESSVCRRKTLLHYFGEEYLEENC-GNCDNCLNPKK 407
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 321
>gi|153809072|ref|ZP_01961740.1| hypothetical protein BACCAC_03380 [Bacteroides caccae ATCC 43185]
gi|423216745|ref|ZP_17203241.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
gi|149128405|gb|EDM19624.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae ATCC 43185]
gi|392629275|gb|EIY23282.1| ATP-dependent DNA helicase RecQ [Bacteroides caccae CL03T12C61]
Length = 726
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 29/202 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K A +D + +SGI+Y S K E+L E L+ G+ YHA
Sbjct: 211 YYEVRAKTAN----IDRDIIKFIKNNPEKSGIVYCLSRKRVEELAEILQANGINARPYHA 266
Query: 109 KLES------------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSLTRTKNQDDFLMEKVEVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + + CRR + Y
Sbjct: 327 RDGGEGQCITFYTNKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ESSVCRRKTLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRR 227
F E +++ C G CD+C ++
Sbjct: 386 FGEEYTEENC-GNCDNCLNPKK 406
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|116199865|ref|XP_001225744.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88179367|gb|EAQ86835.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 456
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 90/179 (50%), Gaps = 30/179 (16%)
Query: 71 SRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------------- 114
S R + GIIYT S ECE L LR + +HAKL V
Sbjct: 241 SERIDSVPGIIYTISRDECESLAAALRCEEIGARPFHAKLPKQVKEETLARWIANERGYD 300
Query: 115 ----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL 170
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D ++
Sbjct: 301 IIVATTAFGMGIDKENVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYAREDRDRV 360
Query: 171 SSMVF---------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+MV ++Q + +L +V+YC D T CR A I YF E EC CD
Sbjct: 361 CNMVMRDGPAGNDKNKQARMESLNRLVAYCEDTTGCRHAAICKYFGEE-KVPECDYACD 418
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 304 ATTAFGMGIDKENVRFVVHWRLPKSFEGYYQ 334
>gi|196228960|ref|ZP_03127826.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
gi|196227241|gb|EDY21745.1| ATP-dependent DNA helicase RecQ [Chthoniobacter flavus Ellin428]
Length = 610
Score = 116 bits (290), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 73/195 (37%), Positives = 103/195 (52%), Gaps = 31/195 (15%)
Query: 53 RIKPAAQKDCLDE-LADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
R+ P AQ D+ LA L SR +SGIIY +S K E + E L + + YHA L
Sbjct: 210 RVVPRAQP--YDQVLAFLRSRP--GESGIIYCSSRKATESVAERLADDRISAKPYHAGLT 265
Query: 112 SN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ +IAFG+GI+KPNVRFV+H+ L K++E +YQE+GRAGRDG
Sbjct: 266 AEERGRHQELFLRDEVRVICATIAFGMGINKPNVRFVLHYDLPKNIEGYYQETGRAGRDG 325
Query: 154 QIAHCILYYRLPDVFKLSSMVFDQ------QTGLANLYNIVSYCLDQTRCRRAIIASYFD 207
C+L + DV K +S + ++ + A L +V + + + CRR + YF
Sbjct: 326 LPGECVLLFSAADVVKQTSFIEEKTDPEERRIARAQLQQMVHFA-ESSACRRVELLGYFG 384
Query: 208 EAWSDTECRGMCDHC 222
E W D C G CD+C
Sbjct: 385 EEWPDENC-GGCDNC 398
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVRFV+H+ L K++E +YQ
Sbjct: 286 ATIAFGMGINKPNVRFVLHYDLPKNIEGYYQ 316
>gi|150004558|ref|YP_001299302.1| ATP-dependent DNA helicase [Bacteroides vulgatus ATCC 8482]
gi|294776076|ref|ZP_06741571.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|423312434|ref|ZP_17290371.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
gi|149932982|gb|ABR39680.1| putative ATP-dependent DNA helicase [Bacteroides vulgatus ATCC
8482]
gi|294450068|gb|EFG18573.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus PC510]
gi|392688918|gb|EIY82202.1| ATP-dependent DNA helicase RecQ [Bacteroides vulgatus CL09T03C04]
Length = 605
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 35/244 (14%)
Query: 11 LNLWRTSFYQVSI-AFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPA---------AQK 60
L + R F +V I A DK + ++ K + F +P QK
Sbjct: 152 LKVLRNQFPKVPIVALTATADKITRKDIVQQLALKDPKIFISSFDRPNLSLEVKRGYQQK 211
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
D + + + + + +N+ GIIY S + E++ L +G+R + YHA L S++
Sbjct: 212 DKMRTILEFIEKH-KNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQN 270
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDK NVR+VIH+ L KS+E+FYQE GRAGRDG + +L+Y
Sbjct: 271 DFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFY 330
Query: 163 RLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMC 219
L D+ LS + Q+ L L+ + Y + CRR I+ +YF E D +C G C
Sbjct: 331 SLGDLVMLSKFATESSQQEINLEKLHRMQQYA-ESDICRRRILLNYFGETM-DHDC-GNC 387
Query: 220 DHCR 223
D CR
Sbjct: 388 DVCR 391
>gi|425470694|ref|ZP_18849554.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
gi|389883511|emb|CCI36062.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9701]
Length = 701
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------- 113
SGI+Y S K + + E+L+ G+ YHA +E
Sbjct: 236 ----------SGIVYCISRKTVDQVAEQLQKDGINALPYHAGMEDRERSQNQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFV+H+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E+++ C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSSVLGYFGESFAGN-C-GNCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|195571657|ref|XP_002103819.1| GD20640 [Drosophila simulans]
gi|194199746|gb|EDX13322.1| GD20640 [Drosophila simulans]
Length = 1473
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/187 (36%), Positives = 99/187 (52%), Gaps = 25/187 (13%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R+ P LD+++ + + + SGIIY S KEC++ +++ G+R +YHA L
Sbjct: 949 RVLPKKGVSTLDDISRYIRSKPAHFSGIIYCLSRKECDETSKKMCKDGIRAVSYHAGL-- 1006
Query: 113 NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
D +VRFV+H+ L KS+E +YQE+GRAGRDG +A CILYY D+ ++
Sbjct: 1007 ---------TDTEHVRFVLHYSLPKSIEGYYQEAGRAGRDGDMADCILYYNYSDMLRIKK 1057
Query: 173 MVFDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----RGMC 219
M+ D L NLY IV YC + T CRRA YF E ++ +C C
Sbjct: 1058 ML-DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETAC 1116
Query: 220 DHCRGGR 226
D+C R
Sbjct: 1117 DNCINKR 1123
>gi|410095931|ref|ZP_11290923.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
gi|409227962|gb|EKN20857.1| ATP-dependent DNA helicase RecQ [Parabacteroides goldsteinii
CL02T12C30]
Length = 727
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGI+Y S K+ E+ + L+ G++ AYHA ++S +IAF
Sbjct: 235 KSGIVYCLSRKKVEEFADILKANGIKALAYHAGMDSGQRSANQDAFLLEKADVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 406
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
L + +IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 282 LEKADVIVATIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|319643550|ref|ZP_07998171.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
gi|345518434|ref|ZP_08797885.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|254835825|gb|EET16134.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 4_3_47FAA]
gi|317384814|gb|EFV65772.1| ATP-dependent DNA helicase [Bacteroides sp. 3_1_40A]
Length = 605
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 82/244 (33%), Positives = 122/244 (50%), Gaps = 35/244 (14%)
Query: 11 LNLWRTSFYQVSI-AFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPA---------AQK 60
L + R F +V I A DK + ++ K + F +P QK
Sbjct: 152 LKVLRNQFPKVPIVALTATADKITRKDIVQQLALKDPKIFISSFDRPNLSLEVKRGYQQK 211
Query: 61 DCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------ 114
D + + + + + +N+ GIIY S + E++ L +G+R + YHA L S++
Sbjct: 212 DKMRTILEFIEKH-KNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKAQN 270
Query: 115 ------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY 162
+IAFG+GIDK NVR+VIH+ L KS+E+FYQE GRAGRDG + +L+Y
Sbjct: 271 DFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLLFY 330
Query: 163 RLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMC 219
L D+ LS + Q+ L L+ + Y + CRR I+ +YF E D +C G C
Sbjct: 331 SLGDLVMLSKFATESSQQEINLEKLHRMQQYA-ESDICRRRILLNYFGETM-DHDC-GNC 387
Query: 220 DHCR 223
D CR
Sbjct: 388 DVCR 391
>gi|342878207|gb|EGU79562.1| hypothetical protein FOXB_09845 [Fusarium oxysporum Fo5176]
Length = 461
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 66/178 (37%), Positives = 93/178 (52%), Gaps = 28/178 (15%)
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------------- 114
++ R + GIIYT S ECE L LR+ G+ +HA+L V
Sbjct: 247 VNERVESVPGIIYTISRDECESLAASLRSEGIGAMPFHARLTKEVKEETLARWINNESGY 306
Query: 115 -----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+ AFG+GIDK NVRFV+H + KS E +YQE+GRAGRDG ++C LYY D+ +
Sbjct: 307 DIIVATTAFGMGIDKNNVRFVVHWRIPKSFEGYYQEAGRAGRDGNASYCFLYYSREDLER 366
Query: 170 LSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
++ ++ +Q L +L + YC D +CR A I YF E+ S +C CD
Sbjct: 367 VTRLIRSDAKAETNQIARLKSLQALAQYCEDTDKCRHAAICKYFGES-STPDCDFACD 423
Score = 44.3 bits (103), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H + KS E +YQ
Sbjct: 311 ATTAFGMGIDKNNVRFVVHWRIPKSFEGYYQ 341
>gi|435850506|ref|YP_007312092.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
gi|433661136|gb|AGB48562.1| ATP-dependent DNA helicase RecQ [Methanomethylovorans hollandica
DSM 15978]
Length = 692
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
YQVR K K+ +++ + + +R +++SGIIY S K ++L +LR G YHA
Sbjct: 202 LYQVRPK----KETYEQIVEFLRKR-KDKSGIIYCQSRKTVDELTGKLRKSGFNALPYHA 256
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L +IAFG+GIDKPNVRFVIH+ L +++E++YQE+GR G
Sbjct: 257 GLSDAARSRNQDIFIKDDAEIIVATIAFGMGIDKPNVRFVIHYDLPRNLESYYQETGRGG 316
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
RDG CIL++ D +K+ + +++ L ++ YC T CRR ++
Sbjct: 317 RDGLECECILFFSRGDKYKIDYFIDQIAKSEEREAARLKLKEVMDYC-QSTICRRKMLLR 375
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + C G CD C
Sbjct: 376 YFGEELQEENC-GGCDVC 392
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFVIH+ L +++E++YQ
Sbjct: 281 TIAFGMGIDKPNVRFVIHYDLPRNLESYYQ 310
>gi|330996065|ref|ZP_08319959.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
gi|329574062|gb|EGG55640.1| ATP-dependent DNA helicase RecQ [Paraprevotella xylaniphila YIT
11841]
Length = 727
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K+ ++ + +R +SGIIY S K E+L E LR + AYHA
Sbjct: 211 YYEVRNK---TKNVDKDIIRFIKQR-PGKSGIIYALSRKRVEELAEILRANDINARAYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GMDSATRSQTQDDFIMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ YY D+ KL V +Q G L +Y + + CRR + Y
Sbjct: 327 RDGGEGLCVTYYAYKDLQKLEKFMEGKPVAEQDIGRQLLSETAAYA-ESSVCRRKFLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + + C G CD+C
Sbjct: 386 FGEEYHEENC-GNCDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|150008998|ref|YP_001303741.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|255014829|ref|ZP_05286955.1| ATP-dependent DNA helicase recQ [Bacteroides sp. 2_1_7]
gi|256841001|ref|ZP_05546508.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262383888|ref|ZP_06077024.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298375770|ref|ZP_06985726.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|301312048|ref|ZP_07217970.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|410102762|ref|ZP_11297687.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
gi|423330257|ref|ZP_17308041.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|423339397|ref|ZP_17317138.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|149937422|gb|ABR44119.1| ATP-dependent DNA helicase recQ [Parabacteroides distasonis ATCC
8503]
gi|256736844|gb|EEU50171.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D13]
gi|262294786|gb|EEY82718.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_33B]
gi|298266807|gb|EFI08464.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_19]
gi|300830150|gb|EFK60798.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 20_3]
gi|409230778|gb|EKN23639.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL09T03C24]
gi|409231873|gb|EKN24721.1| ATP-dependent DNA helicase RecQ [Parabacteroides distasonis
CL03T12C09]
gi|409237889|gb|EKN30684.1| ATP-dependent DNA helicase RecQ [Parabacteroides sp. D25]
Length = 726
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 96/174 (55%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGI+Y S K+ E+ + L+ G++ YHA ++S V +IAF
Sbjct: 235 KSGIVYCLSRKKVEEFADILKANGIKALPYHAGMDSQVRSANQDAFLMEQADVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEDNC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|390440423|ref|ZP_10228752.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
gi|389836165|emb|CCI32878.1| ATP-dependent DNA helicase recQ [Microcystis sp. T1-4]
Length = 703
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 78/245 (31%), Positives = 120/245 (48%), Gaps = 52/245 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHTASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------- 113
SGI+Y S K + + E+L+ G+ YHA ++
Sbjct: 236 ----------SGIVYCISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFV+H+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E+++ C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSSVLGYFGESFAGN-C-GNCDNCR 402
Query: 224 GGRRD 228
G+ +
Sbjct: 403 NGKNN 407
>gi|408674061|ref|YP_006873809.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387855685|gb|AFK03782.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 792
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 110/197 (55%), Gaps = 31/197 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y++R K ++K + +A+ + +SGIIY S K+ E++ L G++ YHA
Sbjct: 212 YYEIRPKIDSKKQLIKYIAN-----NKGKSGIIYCLSRKKVEEIAGLLNVNGIKALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+++ +IAFG+GIDKP+VRFVIH+ KS+E +YQE+GRAG
Sbjct: 267 GLDADTRMKNQDAFLNEECDIIVATIAFGMGIDKPDVRFVIHYDAPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG +C+++Y D+ KL V ++ A L +V+Y + CRR + SY
Sbjct: 327 RDGLEGNCLMFYAYDDILKLEKFNKDKTVTERDNARALLMEMVAYS-NLGVCRRRQLLSY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++D +C G CD+C
Sbjct: 386 FGE-YTDKDC-GFCDNC 400
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDAPKSLEGYYQ 320
>gi|310796170|gb|EFQ31631.1| RecQ family ATP-dependent DNA helicase [Glomerella graminicola
M1.001]
Length = 477
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 91/180 (50%), Gaps = 28/180 (15%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
+ + R N SGIIYT S ECE L LR+ G+ +HAKL V
Sbjct: 262 EAVGERLDNVSGIIYTISRDECESLAAALRDEGVGARPFHAKLTKEVKEQTLTRWVNNEP 321
Query: 115 -------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG + C LYY D+
Sbjct: 322 GYDVIVATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQEAGRAGRDGNASFCFLYYSREDL 381
Query: 168 FKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
++ SM+ + + +L + YC + T CR A I YF E+ +C CD
Sbjct: 382 QRVQSMIRKGNRDGSNWEAQAKSLQQLALYCENTTACRHAQICRYFGES-EVPQCDFACD 440
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQ 358
>gi|73965025|ref|XP_540436.2| PREDICTED: ATP-dependent DNA helicase Q5 [Canis lupus familiaris]
Length = 989
Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 69/204 (33%), Positives = 101/204 (49%), Gaps = 35/204 (17%)
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
CL L + + GI+Y + + CE L EL RG+ AYHA L+++
Sbjct: 242 CLKALGQKADKGLLSGCGIVYCRTREACEQLATELSYRGVNAKAYHAGLKASERTLVQNE 301
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+I+FG+G+DK NVRFV H ++KSM +YQESGRAGRDG+ + C LYY
Sbjct: 302 WMEEKVPVIVATISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYS 361
Query: 164 LPDVFKLSSMVFDQ--------------QTGLANLYNIVSYCLDQTRCRRAIIASYFDEA 209
D ++S ++ + + + +V++C ++ CR A IA YF +A
Sbjct: 362 RNDRDQVSFLIRKEVAKLQEKRGNKASDKAAILAFDALVTFC-EELGCRHAAIAKYFGDA 420
Query: 210 WSDTECRGMCDHCRGGRRDAKRVD 233
C CDHCR KR+D
Sbjct: 421 --PPACTKGCDHCRDPAALRKRLD 442
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+I+FG+G+DK NVRFV H ++KSM +YQ
Sbjct: 313 TISFGMGVDKANVRFVAHWNIAKSMAGYYQ 342
>gi|307609659|emb|CBW99166.1| hypothetical protein LPW_09501 [Legionella pneumophila 130b]
Length = 608
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 93/176 (52%), Gaps = 25/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L +L+ GL+ AYHA L +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 175 FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDA 229
D+Q + N N + + + CRR I+ YFDE S TEC+ CD C + A
Sbjct: 357 LDEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVCDNPPQTA 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|148360486|ref|YP_001251693.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
gi|148282259|gb|ABQ56347.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila str. Corby]
Length = 608
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/176 (40%), Positives = 93/176 (52%), Gaps = 25/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L +L+ GL+ AYHA L +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 175 FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDA 229
D+Q + N N + + + CRR I+ YFDE S TEC+ CD C + A
Sbjct: 357 LDEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVCDNPPQTA 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|363580415|ref|ZP_09313225.1| ATP-dependent DNA helicase RecQ [Flavobacteriaceae bacterium HQM9]
Length = 728
Score = 115 bits (289), Expect = 1e-23, Method: Composition-based stats.
Identities = 73/205 (35%), Positives = 110/205 (53%), Gaps = 32/205 (15%)
Query: 49 FYQVRIKPA-AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
FY+VR K A + D + ++ +SGIIY S K+ E+L + L+ G+ YH
Sbjct: 211 FYEVRPKTANVETDIIR-----FVKQNSEKSGIIYCLSRKKVEELAQALQVNGIIAVPYH 265
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L++ +IAFG+GIDKP+VRFV+H+ + KS+E++YQE+GRA
Sbjct: 266 AGLDAKTRAKHQDMFLMEDIDVVVATIAFGMGIDKPDVRFVVHYDIPKSIESYYQETGRA 325
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG HC+ YY D+ KL V +Q+ G A L +V++ + + RR I
Sbjct: 326 GRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAEQEIGNALLQEVVAFA-ETSISRRKFILH 384
Query: 205 YFDEAWSDTECRG--MCDHCRGGRR 227
YF E + +T G M D+ R ++
Sbjct: 385 YFGEEFDETTGDGGDMDDNVRNPKK 409
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVVHYDIPKSIESYYQ 320
>gi|226941686|ref|YP_002796760.1| RecQ [Laribacter hongkongensis HLHK9]
gi|226716613|gb|ACO75751.1| RecQ [Laribacter hongkongensis HLHK9]
Length = 606
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 29/172 (16%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIA 117
SGI+Y S K ED LR G+ AYHA ++ +IA
Sbjct: 235 GHSGIVYCLSRKRVEDTAAFLRENGIDAMAYHAGFDARTREATQTRFIREEGVVMVATIA 294
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD- 176
FG+GIDKP+VRFV H L KS ENFYQESGRAGRDGQ A L Y L D+ +L M+FD
Sbjct: 295 FGMGIDKPDVRFVAHLDLPKSPENFYQESGRAGRDGQPASSWLCYGLTDMVQLQQMIFDG 354
Query: 177 ------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ L+ L +++YC + CRR ++ ++F E + C G CD+C
Sbjct: 355 DQDEVRRRVELSKLDAMLAYC-ETAGCRRQLLLAHFGETMA--PC-GKCDNC 402
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/30 (73%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KS ENFYQ
Sbjct: 292 TIAFGMGIDKPDVRFVAHLDLPKSPENFYQ 321
>gi|310659806|ref|YP_003937527.1| ATP-dependent DNA helicase [[Clostridium] sticklandii]
gi|308826584|emb|CBH22622.1| ATP-dependent DNA helicase [[Clostridium] sticklandii]
Length = 600
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/225 (32%), Positives = 111/225 (49%), Gaps = 45/225 (20%)
Query: 23 IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIY 82
I G D+PN+ + + +KS F L + ++ F+ +SGI+Y
Sbjct: 193 IEVTTGFDRPNLYYQVLKVSNKS--KF----------------LIEYLNENFKTESGIVY 234
Query: 83 TTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDK 124
+ K E L + L ++G YH + S + AFG+GIDK
Sbjct: 235 CATRKSVESLVKILNDKGFSAVGYHGGMNSEERQNNQDEFILGNKRLIVATNAFGMGIDK 294
Query: 125 PNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-------Q 177
P+VRFVIH+ + K+ME +YQE+GRAGRDG+ + CIL Y D+ K M+ + Q
Sbjct: 295 PDVRFVIHYNMPKNMEAYYQEAGRAGRDGEKSDCILLYSASDIVKQKLMIQNDDIDPKRQ 354
Query: 178 QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ NL +V+YC + C R I +YFDE ++ +C+ C +C
Sbjct: 355 EMLYKNLQYLVNYC-NTNECLRNQILNYFDEDSANGKCKN-CSNC 397
>gi|295133000|ref|YP_003583676.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
gi|294981015|gb|ADF51480.1| ATP-dependent DNA helicase RecQ [Zunongwangia profunda SM-A87]
Length = 731
Score = 115 bits (288), Expect = 1e-23, Method: Composition-based stats.
Identities = 76/208 (36%), Positives = 109/208 (52%), Gaps = 38/208 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
+Y+VR K AD++ RF Q SGIIY S K+ E+L + L+ G+
Sbjct: 213 YYEVRPKTKNVD------ADII--RFVKQNNGKSGIIYCLSRKKVEELAQTLQVNGINAI 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGLDAKTRSKHQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL V +Q+ G A L +V+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYAYKDIEKLEKFMSGKPVAEQEVGHALLQEVVAYA-ETSISRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCRGGRR 227
I YF E + + G M D+ R ++
Sbjct: 384 ILHYFGEEFDEKTGDGASMDDNVRNPKK 411
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|427388684|ref|ZP_18884382.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
gi|425724657|gb|EKU87532.1| ATP-dependent DNA helicase RecQ [Bacteroides oleiciplenus YIT
12058]
Length = 611
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 112/215 (52%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS +++ YQ + K K LD +A R +SGIIY S +
Sbjct: 205 DRPN--------LSLTVKRGYQQKEK---SKAILDFIA-----RHPGESGIIYCMSRSKT 248
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ +GLRV+ YHA L S +IAFG+GIDK NVR+VI
Sbjct: 249 ETVAQMLQKQGLRVAVYHAGLSSAQRDEAQNDFINDRVQIVCATIAFGMGIDKSNVRWVI 308
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + +L+Y L D+ L+ + Q L L +
Sbjct: 309 HYNLPKSIESFYQEIGRAGRDGLPSDTMLFYSLADLILLTKFATESGQQGINLEKLQRMQ 368
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E S TE G CD C+
Sbjct: 369 QYA-EADVCRRRILLSYFGE--STTEDCGNCDVCK 400
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 292 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 321
>gi|34495932|ref|NP_900147.1| ATP-dependent DNA helicase RecQ [Chromobacterium violaceum ATCC
12472]
gi|34101786|gb|AAQ58154.1| ATP-dependent DNA helicase recQ [Chromobacterium violaceum ATCC
12472]
Length = 609
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 106/199 (53%), Gaps = 33/199 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV K A+K +L D + + + +GI+Y S K ED + LR G+ AYHA
Sbjct: 216 FYQVVEKHNAKK----QLLDFIRQEHQGATGIVYCLSRKRVEDTAQWLRENGIEALAYHA 271
Query: 109 KL-----ESN-------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+ E+N ++AFG+GIDKP+VRFV H + KS ENFYQESGRAG
Sbjct: 272 GMSHAEREANQRLFLREDGIVMVATVAFGMGIDKPDVRFVAHIDMPKSPENFYQESGRAG 331
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG + L Y L DV +L M+ +Q L+ L ++++C + CRR I
Sbjct: 332 RDGLPSASWLCYGLNDVVQLRQMIEGGEMAELQKQVELSKLDAMLAFC-ETAGCRRQHIL 390
Query: 204 SYFDEAWSDTECRGMCDHC 222
++F EA C G CD+C
Sbjct: 391 AHFGEA--SKPC-GHCDNC 406
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV H + KS ENFYQ
Sbjct: 295 ATVAFGMGIDKPDVRFVAHIDMPKSPENFYQ 325
>gi|296106447|ref|YP_003618147.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
gi|295648348|gb|ADG24195.1| Superfamily II DNA helicase [Legionella pneumophila 2300/99 Alcoy]
Length = 608
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/169 (42%), Positives = 91/169 (53%), Gaps = 25/169 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L +L+ GL+ AYHA L +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGLKARAYHAGLSHTERREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 175 FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
D+Q + N N + + + CRR I+ YFDE S TEC+ CD C
Sbjct: 357 LDEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVC 403
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|224070434|ref|XP_002303149.1| predicted protein [Populus trichocarpa]
gi|222840581|gb|EEE78128.1| predicted protein [Populus trichocarpa]
Length = 1194
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 98/204 (48%), Gaps = 41/204 (20%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------ 113
K CL+++ + ++ GIIY S +CE + E+L+ G + + YH +++
Sbjct: 662 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVAEKLQECGHKTAFYHGNMDAAQRSFVQ 721
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LY
Sbjct: 722 KQWSKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLY 781
Query: 162 YRLPDVFKLSSMVFDQQT-----------------------GLANLYNIVSYCLDQTRCR 198
Y D ++ M+ Q NL +VSY + CR
Sbjct: 782 YSYSDYIRVKHMIIQGQAEQSPWTAGCGRNNMKSSDRILEKNTENLLRMVSYSENDVDCR 841
Query: 199 RAIIASYFDEAWSDTECRGMCDHC 222
R + +F E + C CD+C
Sbjct: 842 RLLQLLHFGEKFDAGNCGNTCDNC 865
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct: 734 ATVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 764
>gi|86157265|ref|YP_464050.1| ATP-dependent DNA helicase RecQ [Anaeromyxobacter dehalogenans
2CP-C]
gi|85773776|gb|ABC80613.1| ATP-dependent DNA helicase RecQ [Anaeromyxobacter dehalogenans
2CP-C]
Length = 527
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 93/177 (52%), Gaps = 24/177 (13%)
Query: 70 MSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------------- 114
+ R R QSGI+Y S + E+ E LR+ G+R AYHA L+ +V
Sbjct: 237 LVRARRGQSGIVYALSRRSVEETAELLRDHGVRAGAYHAGLDPDVRARVQDEFQSGALEV 296
Query: 115 ---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLS 171
++AFG+GIDKP++RFVIH L +S+E +YQE GRAGRDG + C+L+Y DV
Sbjct: 297 VVATVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMSWD 356
Query: 172 SMVFDQQTGLANLYNIVSYCL----DQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
++ D + +A + ++ + D+ CR + +F E C CD C G
Sbjct: 357 RLLDDAEPEVAEVQRRMARSMFRLADEEGCRHERLVGWFGERID--PCGDACDRCTG 411
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQV---RIKPAAQKDCLD--ELADLMS 71
++AFG+GIDKP++RFVIH L +S+E +YQ + AQ DC+ AD+MS
Sbjct: 300 TVAFGMGIDKPDIRFVIHRDLPRSVEAYYQEIGRAGRDGAQSDCVLFYSWADVMS 354
>gi|359406153|ref|ZP_09198865.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
gi|357556705|gb|EHJ38287.1| ATP-dependent DNA helicase RecQ [Prevotella stercorea DSM 18206]
Length = 723
Score = 115 bits (288), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 105/197 (53%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D+ ++ +SGIIY S K+ E+L L+ ++ +AYHA
Sbjct: 211 YYEVRQK----TNDIDKQIIKFIKQHPGKSGIIYCISRKKVEELAAVLKANDIKAAAYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGICIAFYAYKDLQKLEKFMEGKPVAEQDIGRQLLQETAAYA-ETSVCRRKVLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E ++ C G CD+C
Sbjct: 386 FGEEYTKENC-GNCDNC 401
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|336363644|gb|EGN92022.1| hypothetical protein SERLA73DRAFT_99863 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380498|gb|EGO21651.1| hypothetical protein SERLADRAFT_357494 [Serpula lacrymans var.
lacrymans S7.9]
Length = 527
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/206 (32%), Positives = 106/206 (51%), Gaps = 34/206 (16%)
Query: 54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHAKL-- 110
++P A K+ L + + N +G+IY S + C+D+ ++LR + YHA +
Sbjct: 218 VRPKAGKNALQPIVAFIKSNHPNSTGVIYCLSRQNCDDVAQKLREEYKIDARPYHAAMSA 277
Query: 111 ---ESN-------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQ 154
E N ++AFG+GIDK +VRFVIH+ + KSM+ +YQE+GRAGRDG
Sbjct: 278 LDRERNQVDWQNDKYKVIVATVAFGMGIDKADVRFVIHYSIPKSMDGYYQETGRAGRDGL 337
Query: 155 IAHCILYYRLPDVFKLSSMV--------------FDQQTGLANLYNIVSYCLDQTRCRRA 200
A C+LYY D M+ +++ + +V YC + CRR
Sbjct: 338 PADCLLYYSYRDATVRMKMIDNDRGDTDRPPLSGVERKRQQEEVSAVVQYCNNDVDCRRC 397
Query: 201 IIASYFDEAWSDTECRGMCDHC-RGG 225
++ ++F E+++ +C CD+C RGG
Sbjct: 398 LLLAHFGESFNLKDCHKGCDNCSRGG 423
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 31/41 (75%), Gaps = 3/41 (7%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
W+ Y+V ++AFG+GIDK +VRFVIH+ + KSM+ +YQ
Sbjct: 287 WQNDKYKVIVATVAFGMGIDKADVRFVIHYSIPKSMDGYYQ 327
>gi|319954189|ref|YP_004165456.1| ATP-dependent DNA helicase recq [Cellulophaga algicola DSM 14237]
gi|319422849|gb|ADV49958.1| ATP-dependent DNA helicase RecQ [Cellulophaga algicola DSM 14237]
Length = 733
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 75/196 (38%), Positives = 104/196 (53%), Gaps = 36/196 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
FY+VR P Q + AD++ RF Q SGIIY S K+ E+L + L+ G+
Sbjct: 213 FYEVR--PKTQ----NIEADII--RFVKQNTGKSGIIYCLSRKKVEELAQILQVNGVSAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA ++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGFDTKTRSKYQDMFLMEGVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL V +Q+ G A L +V+Y + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEIGNALLQEMVAYA-ETSMSRRKF 383
Query: 202 IASYFDEAWSDTECRG 217
I YF E + D G
Sbjct: 384 ILHYFGEHFDDVTGDG 399
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|119470517|ref|ZP_01613220.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
gi|119446218|gb|EAW27495.1| ATP-dependent DNA helicase [Alteromonadales bacterium TW-7]
Length = 607
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYLKEQ-----KNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E +YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + +C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREQC-GNCDIC 405
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E +YQ
Sbjct: 294 ATVAFGMGINKPNVRFVLHYDIPKSIEAYYQ 324
>gi|359449260|ref|ZP_09238757.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
gi|392537893|ref|ZP_10285030.1| ATP-dependent DNA helicase [Pseudoalteromonas marina mano4]
gi|358044909|dbj|GAA75006.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20480]
Length = 607
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYLKEQ-----KNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E +YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + +C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREQC-GNCDIC 405
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E +YQ
Sbjct: 294 ATVAFGMGINKPNVRFVLHYDIPKSIEAYYQ 324
>gi|408675008|ref|YP_006874756.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
gi|387856632|gb|AFK04729.1| ATP-dependent DNA helicase RecQ [Emticicia oligotrophica DSM 17448]
Length = 715
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/197 (36%), Positives = 107/197 (54%), Gaps = 31/197 (15%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+R+ P ++ L + + +++R NQSGIIY S K ED+ E LR G+R YHA L+
Sbjct: 205 LRVLPG--RNRLKVIHEFIAKR-TNQSGIIYCLSRKNTEDVAEGLRKLGIRAMHYHAGLD 261
Query: 112 SNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ +IAFG+GIDK NVRFVIH+ L ++E+FYQE GRAGRDG
Sbjct: 262 AQTRAEVQDAYIKDEIQVIVATIAFGMGIDKSNVRFVIHYSLPSNVESFYQEIGRAGRDG 321
Query: 154 QIAHCILYYRLPDVFKLSSMVFD-------QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
+ +L+Y D+ M+ ++ LA L + Y + CRR ++ SYF
Sbjct: 322 MKSDTLLFYSFGDIITRKEMIQKSELPDEMKEVQLAKLERMKQYAESEI-CRRRVLMSYF 380
Query: 207 DEAWSDTECRGMCDHCR 223
+E ++ +C G CD C+
Sbjct: 381 NEE-TNNDC-GNCDVCQ 395
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVRFVIH+ L ++E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRFVIHYSLPSNVESFYQ 312
>gi|60682718|ref|YP_212862.1| ATP-dependent DNA helicase [Bacteroides fragilis NCTC 9343]
gi|60494152|emb|CAH08944.1| putative ATP-dependent DNA helicase [Bacteroides fragilis NCTC
9343]
Length = 607
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGIIY S +
Sbjct: 202 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIIYCMSRSKT 245
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 246 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 305
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 306 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 365
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 366 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 397
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 288 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 318
>gi|383761220|ref|YP_005440202.1| ATP-dependent DNA helicase RecQ [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381488|dbj|BAL98304.1| ATP-dependent DNA helicase RecQ [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 761
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 105/209 (50%), Gaps = 25/209 (11%)
Query: 48 NFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
N Y + ++P + EL + + + +SGI+Y + ++ +DL E ++ G V AYH
Sbjct: 222 NLY-LSVRPRGSGKGIRELLRFLEKH-KGESGIVYCNTRRQVDDLVERIQKEGFSVVAYH 279
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A LE +IAFG+G++KP+VRFV+H+ + S+E +YQ+ GRA
Sbjct: 280 AGLEPETRTANHRRFLNEDGCIAVATIAFGMGVNKPDVRFVVHYTMPASIEQYYQQIGRA 339
Query: 150 GRDGQIAHCILYYRLPDV----FKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
GRDG A C+L Y D+ F + Q+ G + + CRR + +Y
Sbjct: 340 GRDGLPASCLLLYHPQDLITHYFHIEKGAAKQRPGRVARLQAMERFVRTIECRRIPLLTY 399
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
F E +T+C+ CD+C G ++DV
Sbjct: 400 FGETPKETKCQA-CDNCLTGSDAIPKIDV 427
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 16/31 (51%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+G++KP+VRFV+H+ + S+E +YQ
Sbjct: 304 ATIAFGMGVNKPDVRFVVHYTMPASIEQYYQ 334
>gi|423283377|ref|ZP_17262261.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
gi|404581095|gb|EKA85801.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 615]
Length = 601
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFITRH-RGESGIVYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|383119448|ref|ZP_09940187.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
gi|382973213|gb|EES87060.2| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_2_5]
Length = 601
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFITRH-RGESGIVYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|288803880|ref|ZP_06409305.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
gi|288333645|gb|EFC72095.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica D18]
Length = 727
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 104/197 (52%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P D ++ ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVR--PKKSDDDTNKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICIVFYSKKDLNKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C MCD+C
Sbjct: 388 FGEDYPKCNC-AMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|305664748|ref|YP_003861035.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
gi|88707870|gb|EAR00109.1| ATP-dependent DNA helicase recQ [Maribacter sp. HTCC2170]
Length = 736
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 72/210 (34%), Positives = 107/210 (50%), Gaps = 30/210 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K A +D ++ +SGI+Y S K E+L + L+ G+ YHA
Sbjct: 218 FYEVRTKTAN----VDSDIIRFVKQNSGKSGIVYCLSRKRVEELAQVLQVNGVSAVPYHA 273
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GRAG
Sbjct: 274 GFDAKTRSKYQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGRAG 333
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ +Y D+ KL V +Q+ G A L +V+Y + + RR + Y
Sbjct: 334 RDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEIGNALLQEVVAYA-ETSMSRRKFMLHY 392
Query: 206 FDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
F E + + G M D+ R + + D
Sbjct: 393 FGEEFDEVNGDGAAMDDNTRNPKEKQEAKD 422
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 298 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 327
>gi|425444700|ref|ZP_18824746.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|425454418|ref|ZP_18834158.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
gi|389735511|emb|CCI01005.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9443]
gi|389804921|emb|CCI15689.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9807]
Length = 703
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 118/242 (48%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------------- 113
SGI+Y S K + + E+L+ G+ YHA ++
Sbjct: 236 ----------SGIVYCISRKTVDKVAEQLQKDGIDALPYHAGMDDRERSENQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFV+H+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVVHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E++S C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSSVLGYFGESFSGN-C-GNCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|313148719|ref|ZP_07810912.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
gi|313137486|gb|EFR54846.1| ATP-dependent DNA helicase [Bacteroides fragilis 3_1_12]
Length = 607
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 111/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R++SGIIY S +
Sbjct: 202 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFIARH-RDESGIIYCMSRSKT 245
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 246 ETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 305
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 306 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 365
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 366 QYA-EADICRRRILLSYFGE--TATEDCGNCDVCR 397
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 288 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 318
>gi|218262311|ref|ZP_03476825.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
gi|218223462|gb|EEC96112.1| hypothetical protein PRABACTJOHN_02499 [Parabacteroides johnsonii
DSM 18315]
Length = 729
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+ + L+ G++ YHA ++S +IAF
Sbjct: 238 KSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAF 297
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 298 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 357
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 358 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 409
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 294 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 323
>gi|325291006|ref|YP_004267187.1| ATP-dependent DNA helicase, RecQ-like protein [Syntrophobotulus
glycolicus DSM 8271]
gi|324966407|gb|ADY57186.1| ATP-dependent DNA helicase, RecQ-like protein [Syntrophobotulus
glycolicus DSM 8271]
Length = 587
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/189 (38%), Positives = 103/189 (54%), Gaps = 32/189 (16%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES-------------NVSI-- 116
R +QSGIIY + K+ + L E L ++G R YHA + ++S+
Sbjct: 225 RTHPDQSGIIYAATRKDVDKLCELLLSKGFRAGRYHAGMRDEERKKNQEKFIFDDISVMV 284
Query: 117 ---AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
AFG+GIDK NVRFVIH+ + K+ME++YQE+GRAGRDG+ A CIL + DV ++ +
Sbjct: 285 ATNAFGMGIDKSNVRFVIHYNMPKNMESYYQEAGRAGRDGEEAECILLFGPQDV-QIQKL 343
Query: 174 VFDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
+ + TG L +V YC +RC R I YF+E +C G C +C G
Sbjct: 344 LIEDSTGSEVRQAKEYKKLQAMVDYC-HTSRCLRKAILDYFEEKNVPEQC-GNCGNCEG- 400
Query: 226 RRDAKRVDV 234
+ +RVDV
Sbjct: 401 --EKERVDV 407
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/28 (67%), Positives = 25/28 (89%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
AFG+GIDK NVRFVIH+ + K+ME++YQ
Sbjct: 288 AFGMGIDKSNVRFVIHYNMPKNMESYYQ 315
>gi|358379072|gb|EHK16753.1| hypothetical protein TRIVIDRAFT_41322 [Trichoderma virens Gv29-8]
Length = 478
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 70/175 (40%), Positives = 91/175 (52%), Gaps = 28/175 (16%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R N SGIIYTTS ECE L LR+ G+ +HAKL +V
Sbjct: 267 RTENVSGIIYTTSRDECESLSASLRDAGVGARPFHAKLPKDVKEDTLTNWINNEPGYDII 326
Query: 115 --SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
+ AFG+GIDK NVRFV+H L KS E +YQE GRAGRDG ++C LYY D+ ++S
Sbjct: 327 VATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQEVGRAGRDGNASYCFLYYSREDLERVSR 386
Query: 173 MV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
M+ + ++ L +L + YC + CR A I YF E + C CD
Sbjct: 387 MIKSDTKADSNYESRLRSLQALAYYCENINACRHASICKYFGEE-TIPACDFACD 440
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQ 358
>gi|145220257|ref|YP_001130966.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
gi|145206421|gb|ABP37464.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeovibrioides DSM
265]
Length = 622
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/189 (38%), Positives = 96/189 (50%), Gaps = 26/189 (13%)
Query: 60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-----ESN- 113
KD +D + R ++GIIY TS K D L+ +G R AYHA L E N
Sbjct: 224 KDGVDAQIVSLLRAHSGKAGIIYRTSRKSVNDTAAMLQAKGFRALAYHAGLGDEERERNQ 283
Query: 114 ------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
+IAFG+GIDK N+RFVIH + KS+EN+YQE+GRAGRDG+ AHC L
Sbjct: 284 NAFIRDEVDVIVATIAFGMGIDKSNIRFVIHADMPKSIENYYQETGRAGRDGEPAHCTLL 343
Query: 162 YRLPDVFKLSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC 215
+ D KL + ++ L L + S+ CRR + +YF E +S C
Sbjct: 344 FSQGDQAKLRFFIDTMEDEGEKARALEALRKVASFASSGV-CRRKALLNYFGEQYSKENC 402
Query: 216 RGMCDHCRG 224
G CD C G
Sbjct: 403 -GSCDVCLG 410
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK N+RFVIH + KS+EN+YQ
Sbjct: 297 TIAFGMGIDKSNIRFVIHADMPKSIENYYQ 326
>gi|154494364|ref|ZP_02033684.1| hypothetical protein PARMER_03719 [Parabacteroides merdae ATCC
43184]
gi|154085808|gb|EDN84853.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 729
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+ + L+ G++ YHA ++S +IAF
Sbjct: 238 KSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAF 297
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 298 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 357
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 358 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 409
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 294 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 323
>gi|166362830|ref|YP_001655103.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
gi|166085203|dbj|BAF99910.1| ATP-dependent DNA helicase [Microcystis aeruginosa NIES-843]
Length = 703
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SN---------- 113
+GI+Y S K + + E+L+ G+ YHA +E SN
Sbjct: 236 ----------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E+++ C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSRVLGYFGESFAGN-C-GNCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|427713763|ref|YP_007062387.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
gi|427377892|gb|AFY61844.1| ATP-dependent DNA helicase RecQ [Synechococcus sp. PCC 6312]
Length = 730
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 117/250 (46%), Gaps = 43/250 (17%)
Query: 7 TIAYLNLWRTSFYQV--SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLD 64
TI + L T+ ++V I L + KP V H S + N Y I+ + K L
Sbjct: 168 TIPVIALTATATHRVRTDITEQLSLKKPFV-----HVASFNRPNLYYEVIEKSRGKVSLS 222
Query: 65 ELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---------- 114
EL + SGIIY S K+ E L EL G+ YHA L +
Sbjct: 223 ELTGYIKET--EGSGIIYCMSRKQVEKLASELNENGISALPYHAGLSNETRTDHQTRFIR 280
Query: 115 --------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD 166
++AFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ D
Sbjct: 281 DDVQIMVATVAFGMGINKPDVRFVIHYDLPQTIEGYYQESGRAGRDGEPARCTLFFSPGD 340
Query: 167 VFKL-------------SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
+ + + +Q+ L I +Y D T CRR + YF E +
Sbjct: 341 IKQADWFIQNKVHPETNEPLEDEQRIARQQLRQIAAYA-DSTLCRRTTLLGYFGEVFGGN 399
Query: 214 ECRGMCDHCR 223
C G CD+CR
Sbjct: 400 -C-GQCDNCR 407
>gi|423343078|ref|ZP_17320792.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|409216754|gb|EKN09737.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 726
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+ + L+ G++ YHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|425466065|ref|ZP_18845368.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
gi|389831578|emb|CCI25550.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9809]
Length = 703
Score = 115 bits (287), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SN---------- 113
+GI+Y S K + + E+L+ G+ YHA +E SN
Sbjct: 236 ----------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E+++ C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSRVLGYFGESFAGN-C-GNCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|333378586|ref|ZP_08470317.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
gi|332883562|gb|EGK03845.1| ATP-dependent DNA helicase RecQ [Dysgonomonas mossii DSM 22836]
Length = 731
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 68/209 (32%), Positives = 107/209 (51%), Gaps = 29/209 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR ++ D +D+ + +SGIIY S K+ E+ E L+ + YHA
Sbjct: 212 YYEVR----SKTDKVDKDIIKYIKSQGTKSGIIYCLSRKKVEEFAEILQTNNINALPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ + +IAFG+GIDKP+VR+VIH+ + KS+E +YQE+GRAG
Sbjct: 268 GLDPSTRSANQDAFLMEKVNVIVATIAFGMGIDKPDVRYVIHYDMPKSLEGYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q+ G L +Y + CR+ ++ Y
Sbjct: 328 RDGGEGRCIAFYSFKDLQKLEKFMQGKPVAEQEIGKQLLLETAAYA-ETALCRKKVLLHY 386
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
F E + + C G CD+C ++ + D+
Sbjct: 387 FGEEYKEKNC-GNCDNCVNPKKQVEAKDL 414
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHYDMPKSLEGYYQ 321
>gi|145496268|ref|XP_001434125.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401248|emb|CAK66728.1| unnamed protein product [Paramecium tetraurelia]
Length = 889
Score = 115 bits (287), Expect = 2e-23, Method: Composition-based stats.
Identities = 69/206 (33%), Positives = 107/206 (51%), Gaps = 23/206 (11%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
Y+VR + +K + E+ + +++ + QSGIIY + EC+ L + L G+ YHA
Sbjct: 281 YEVRCREEFKK-AVQEIKEFINQTYPKQSGIIYCLTQSECQTLSQNLIYHGIGSDFYHAG 339
Query: 110 LES------------NVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAH 157
L N + K + RFVIH + KS+EN+YQESGRAGRDG+ AH
Sbjct: 340 LTEKERHRIHKNWLMNEVQHLVWELTKKDCRFVIHFQMPKSIENYYQESGRAGRDGKQAH 399
Query: 158 CILYYRLPDVFKLSSMVFDQQTGLA---NLYNI------VSYCLDQTRCRRAIIASYFDE 208
C+L+Y D +K + + DQ T + YNI +C D+ CRR + SY E
Sbjct: 400 CLLFYNNSD-YKTNLYLMDQNTEMTAQMKKYNIKKLDQMQQFCYDRLSCRRVLQLSYLGE 458
Query: 209 AWSDTECRGMCDHCRGGRRDAKRVDV 234
+ T C CD+C+ +A+++++
Sbjct: 459 NFDRTLCNKKCDNCQRDDENAEKINL 484
>gi|359454206|ref|ZP_09243496.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|414070221|ref|ZP_11406208.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
gi|358048729|dbj|GAA79745.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20495]
gi|410807319|gb|EKS13298.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. Bsw20308]
Length = 607
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 112/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYL-----KEQKNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E++YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREPC-GNCDIC 405
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E++YQ
Sbjct: 295 TVAFGMGINKPNVRFVLHYDIPKSIESYYQ 324
>gi|317504966|ref|ZP_07962914.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
gi|315663848|gb|EFV03567.1| ATP-dependent helicase RecQ [Prevotella salivae DSM 15606]
Length = 725
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D+ R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRPK----TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANNIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGLCIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C CD+C
Sbjct: 386 FGEEYPHDNCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|423725451|ref|ZP_17699588.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409234575|gb|EKN27403.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 726
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+ + L+ G++ YHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|423346935|ref|ZP_17324622.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409218596|gb|EKN11564.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 726
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 63/174 (36%), Positives = 95/174 (54%), Gaps = 25/174 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
+SGIIY S K+ E+ + L+ G++ YHA ++S +IAF
Sbjct: 235 KSGIIYCLSRKKVEEFADILKANGIKALPYHAGMDSQQRSSNQDAFLMEKADVIVATIAF 294
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL
Sbjct: 295 GMGIDKPDVRYVIHYDIPKSLEGYYQETGRAGRDGGEGQCIAFYAYKDLQKLEKFMQGKP 354
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRR 227
V +Q+ G L +Y + + CRR ++ YF E + + C G CD+C ++
Sbjct: 355 VAEQEIGKQLLLETAAYA-ETSVCRRKVLLHYFGEEYLEENC-GNCDNCLNPKK 406
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRYVIHYDIPKSLEGYYQ 320
>gi|258647142|ref|ZP_05734611.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
gi|260853106|gb|EEX72975.1| ATP-dependent DNA helicase RecQ [Prevotella tannerae ATCC 51259]
Length = 726
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 99/183 (54%), Gaps = 25/183 (13%)
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SI 116
+ +SGIIY S K+ E+L E LR ++ +AYHA ++ +I
Sbjct: 233 KGKSGIIYCLSRKKVEELAEVLRANNIKAAAYHAGMDPQTRSQTQDDFLMESIDIIVATI 292
Query: 117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM--- 173
AFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG C+ +Y D+ KL
Sbjct: 293 AFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGVCLAFYSPDDLKKLEKFMEG 352
Query: 174 --VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKR 231
+ +Q+ G L +Y + + CRR ++ YF E + C G CD+C ++ +
Sbjct: 353 KPLAEQEIGRLLLKETAAYA-ESSVCRRKMLLHYFGEDYKKENC-GNCDNCLHPKKKVEA 410
Query: 232 VDV 234
D+
Sbjct: 411 KDL 413
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|386719614|ref|YP_006185940.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia D457]
gi|384079176|emb|CCH13774.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia D457]
Length = 575
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 108/219 (49%), Gaps = 49/219 (22%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKD-CLDELADLMSRRFRNQSGIIYTTSIKE 88
D+PN+R+ + QKD +L D + R R ++GI+Y S ++
Sbjct: 176 DRPNIRYTV-------------------VQKDNARKQLTDFL-RSHRGEAGIVYCMSRRK 215
Query: 89 CEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFV 130
E+ E L +G YHA L +V +IAFG+GIDKP+VRFV
Sbjct: 216 VEETAEFLCGQGFNALPYHAGLPPDVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFV 275
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LAN 183
H L KSME +YQE+GRAGRDG+ A L Y L DV L M+ + G A
Sbjct: 276 AHTDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERAK 335
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +++ YC + +CRR ++ + F E + C G CD+C
Sbjct: 336 LDHLLGYC-ESMQCRRQVLLAGFGETYPQP-C-GNCDNC 371
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KSME +YQ
Sbjct: 259 ATIAFGMGIDKPDVRFVAHTDLPKSMEGYYQ 289
>gi|39937884|ref|NP_950160.1| DNA helicase [Rhodopseudomonas palustris CGA009]
gi|39651744|emb|CAE30266.1| DNA helicase [Rhodopseudomonas palustris CGA009]
Length = 616
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/219 (34%), Positives = 105/219 (47%), Gaps = 47/219 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + PA K +D+ R R SG++Y S +
Sbjct: 213 DRPNIRYSI-----------VDKQNAPAQLKAFIDD-------RHRGHSGVVYCLSRAKV 254
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED+ E L GL YHA L +V +IAFG+GIDKP+VRFV
Sbjct: 255 EDIAETLSKSGLTALPYHAGLPPDVRARNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVA 314
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LAN 183
H L KS+E +YQE+GRAGRDG+ + + Y L D+ + M+ D+ +G +
Sbjct: 315 HLDLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMI-DESSGSDAFKRVSMGK 373
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +V C + T CRR + YF E C G CD+C
Sbjct: 374 LDALVGLC-ESTGCRRTRLLGYFGETAQHESC-GNCDNC 410
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KS+E +YQ
Sbjct: 297 ATIAFGMGIDKPDVRFVAHLDLPKSIEAYYQ 327
>gi|345885011|ref|ZP_08836404.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
gi|345042066|gb|EGW46174.1| ATP-dependent DNA helicase RecQ [Prevotella sp. C561]
Length = 727
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P D ++ ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVR--PKKSDDDTNKQIIKFIKQHAGKSGIIYCLSRKKVEELAAILKANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKAQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL + +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICIVFYSKKDLNKLEKFMEGKPIAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C MCD+C
Sbjct: 388 FGEDYPKCNC-SMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|380490324|emb|CCF36092.1| RecQ family ATP-dependent DNA helicase [Colletotrichum
higginsianum]
Length = 477
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 87/175 (49%), Gaps = 28/175 (16%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R N SGIIYT S ECE L LR+ G+ +HAKL
Sbjct: 267 RVDNVSGIIYTISRDECESLAAALRDEGVGARPFHAKLTKETKEQTLDRWVKNEPGYDVI 326
Query: 115 --SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG + C LYY D+ ++ S
Sbjct: 327 VATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQEAGRAGRDGNASFCFLYYSREDLQRVQS 386
Query: 173 MV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
M+ + + +L + YC D T CR A I YF E +C CD
Sbjct: 387 MIRKGNRDGSNWEAQAKSLQKLALYCEDTTACRHAQICRYFGED-ETPKCDFACD 440
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQ 358
>gi|91204323|emb|CAJ71976.1| strongly similar to ATP-dependent DNA helicase [Candidatus Kuenenia
stuttgartiensis]
Length = 772
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/172 (38%), Positives = 89/172 (51%), Gaps = 26/172 (15%)
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SI 116
+ +SGIIY K E L L+ G R YHA L + + +I
Sbjct: 281 KKESGIIYCQGRKTVESLAGSLQGEGYRALPYHAGLSAEMRTENQERFIREDIEIIVATI 340
Query: 117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF- 175
AFG+GIDKPNVR+VIH+ L KS+E +YQE+GRAGRDG + CIL + D K+ +
Sbjct: 341 AFGMGIDKPNVRYVIHYDLPKSIEGYYQETGRAGRDGLKSDCILLFSYADKIKIEYFIHQ 400
Query: 176 -----DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++Q L +VSYC + CRR I+ YF E ++ C CD C
Sbjct: 401 KEDENEKQAAYQQLKALVSYC-EGNVCRRKILLDYFGEKFTTHNCEN-CDTC 450
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVR+VIH+ L KS+E +YQ
Sbjct: 339 TIAFGMGIDKPNVRYVIHYDLPKSIEGYYQ 368
>gi|423270795|ref|ZP_17249766.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|423274619|ref|ZP_17253565.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
gi|392698719|gb|EIY91901.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T00C42]
gi|392704877|gb|EIY98011.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL05T12C13]
Length = 601
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFITRH-RGESGIVYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 282 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|336411370|ref|ZP_08591837.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|423251179|ref|ZP_17232194.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|423254505|ref|ZP_17235435.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
gi|335942081|gb|EGN03930.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_56FAA]
gi|392652136|gb|EIY45798.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T00C08]
gi|392653827|gb|EIY47478.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL03T12C07]
Length = 601
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIVYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 282 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|146300558|ref|YP_001195149.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
gi|146154976|gb|ABQ05830.1| ATP-dependent DNA helicase RecQ [Flavobacterium johnsoniae UW101]
Length = 705
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/193 (38%), Positives = 101/193 (52%), Gaps = 27/193 (13%)
Query: 52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
+ ++PA D + ++ D + + N+SGIIY S K E+L E+L G+ AYHA L+
Sbjct: 206 LEVRPAL--DRVKQIIDFVENK-PNESGIIYCLSRKTTEELAEKLAKNGIAAKAYHAGLD 262
Query: 112 SNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDG 153
+ +IAFG+GIDK NVR+VIH+ L K++E +YQE GRAGRDG
Sbjct: 263 NTTRAKTQDEFINDDCQVVCATIAFGMGIDKSNVRWVIHYNLPKNIEGYYQEIGRAGRDG 322
Query: 154 QIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
A +L+ DV +L D LA L + Y D CRR I+ SYF E
Sbjct: 323 LPAETVLFESYADVIQLQKFASDGLNADVQLAKLDRMKQYA-DAVSCRRKILLSYFGELV 381
Query: 211 SDTECRGMCDHCR 223
TE G CD C+
Sbjct: 382 --TENCGNCDICK 392
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L K++E +YQ
Sbjct: 284 TIAFGMGIDKSNVRWVIHYNLPKNIEGYYQ 313
>gi|423278476|ref|ZP_17257390.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
gi|404586486|gb|EKA91059.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 610]
Length = 601
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGIIY S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFIARH-RGESGIIYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRDEAQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-EADICRRRILLSYFGE--TATEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 282 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|189499066|ref|YP_001958536.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides BS1]
gi|189494507|gb|ACE03055.1| ATP-dependent DNA helicase RecQ [Chlorobium phaeobacteroides BS1]
Length = 674
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 72/202 (35%), Positives = 107/202 (52%), Gaps = 31/202 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY +R K A + L + Q+GIIY TS K + L+ +G R YHA
Sbjct: 269 FYDIRFKENANAQLVSIL-----KSNPGQAGIIYRTSRKSVNETAALLKAKGFRALPYHA 323
Query: 109 KL---------------ESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L E+++ +IAFG+GIDK N+R VIH L KS+E++YQE+GRAG
Sbjct: 324 GLSDEERQRNQEAFIRDEADIIVATIAFGMGIDKSNIRLVIHADLPKSIESYYQETGRAG 383
Query: 151 RDGQIAHCILYYRLPDV----FKLSSMVFDQQTG--LANLYNIVSYCLDQTRCRRAIIAS 204
RDG+ A C L + D+ F + ++V + + G L++L ++S+ + + CRR +
Sbjct: 384 RDGEPARCTLLFSQSDIPKIRFFIDTIVDETERGKALSSLQKVISF-VSTSVCRRKTLLD 442
Query: 205 YFDEAWSDTECRGMCDHCRGGR 226
YFDE + C+ CD C G R
Sbjct: 443 YFDETYPHDNCKS-CDICLGTR 463
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK N+R VIH L KS+E++YQ
Sbjct: 347 ATIAFGMGIDKSNIRLVIHADLPKSIESYYQ 377
>gi|284034978|ref|YP_003384908.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
gi|283814271|gb|ADB36109.1| ATP-dependent DNA helicase RecQ [Spirosoma linguale DSM 74]
Length = 707
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 91/174 (52%), Gaps = 26/174 (14%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
+ SGIIY S K E L +L+ +G + YHAK++ + +IA
Sbjct: 234 DTSGIIYCLSRKSTESLAAKLQEKGFSAAFYHAKMDPDDRSKTQEAFLRDDVRIICATIA 293
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
FG+GIDK NVR+VIH+ + K++E+FYQE GRAGRDG A +L+Y DV M+ +
Sbjct: 294 FGMGIDKSNVRWVIHYNMPKNIESFYQEIGRAGRDGAAAQTVLFYSFADVATYKDMLAEN 353
Query: 178 QTG-----LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
LA L + Y D CRR I+ SYF E D C G CD CR R
Sbjct: 354 NPANLGLQLAKLERMQQYA-DAHTCRRQILLSYFSEELPDP-C-GNCDVCRDPR 404
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ + K++E+FYQ
Sbjct: 291 TIAFGMGIDKSNVRWVIHYNMPKNIESFYQ 320
>gi|407928616|gb|EKG21469.1| Helicase [Macrophomina phaseolina MS6]
Length = 492
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/193 (35%), Positives = 90/193 (46%), Gaps = 38/193 (19%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------ 113
+R SGI+YT + CE L E LR G+ YHA L +
Sbjct: 269 KRPEALSGIVYTLFRRSCEGLAERLRASGIGARPYHAGLSNAEKDAALSGWVANAPGYEI 328
Query: 114 --VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLS 171
+ AFG+GIDK +VRFV+H L KS E FYQE+GRAGRDG+ A CILYY D + +
Sbjct: 329 VVATTAFGMGIDKEDVRFVVHWELPKSFEGFYQEAGRAGRDGKAAACILYYSREDRDRAA 388
Query: 172 SMVF------------------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
M+ ++ +L +V YC + RCR +IA YF E
Sbjct: 389 GMMARDMPSECAGGGGVSAAMEKHRSRAESLKKLVDYCEETRRCRHKMIAEYFGENGEAV 448
Query: 214 ECRGMCDHCRGGR 226
C CD C+ +
Sbjct: 449 PCEWACDWCKDAK 461
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK +VRFV+H L KS E FYQ
Sbjct: 331 ATTAFGMGIDKEDVRFVVHWELPKSFEGFYQ 361
>gi|53714712|ref|YP_100704.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
gi|52217577|dbj|BAD50170.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis YCH46]
Length = 607
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 202 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIVYCMSRSKT 245
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 246 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 305
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 306 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 365
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 366 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 397
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 288 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 318
>gi|402830902|ref|ZP_10879596.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
gi|402283336|gb|EJU31854.1| ATP-dependent DNA helicase RecQ [Capnocytophaga sp. CM59]
Length = 729
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 42/245 (17%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMEN----FYQVRIKPAAQKDCL 63
I L T+ Q I LGI + NV KS N +Y+VR K K+
Sbjct: 176 IIALTATATTKVQEDILKNLGIPQANV--------FKSSFNRPNLYYEVRPK---TKNIN 224
Query: 64 DELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV--------- 114
++ + +R QSGIIY S K E+L + L+ G+ YHA L++
Sbjct: 225 SDIIRFVKQR-PGQSGIIYCLSRKSVEELAQTLQVNGITAIPYHAGLDAKTRAKHQDMFL 283
Query: 115 ---------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP 165
+IAFG+GIDKP+VRFVIH+ + KS+E++YQE+GRAGRDG +C+ +Y
Sbjct: 284 MEEVEVVVATIAFGMGIDKPDVRFVIHYDIPKSIESYYQETGRAGRDGGEGYCLAFYCYK 343
Query: 166 DVFKL-----SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--M 218
D+ KL S + +Q+ G A L ++V+Y + + RR I YF E + + G M
Sbjct: 344 DIEKLEKFMVSKPIAEQEVGQALLQDMVAYA-ETSSSRRKFILHYFGEEFDEINGEGANM 402
Query: 219 CDHCR 223
D+ R
Sbjct: 403 DDNMR 407
>gi|345888669|ref|ZP_08839734.1| ATP-dependent DNA helicase RecQ [Bilophila sp. 4_1_30]
gi|345040450|gb|EGW44706.1| ATP-dependent DNA helicase RecQ [Bilophila sp. 4_1_30]
Length = 610
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/244 (31%), Positives = 117/244 (47%), Gaps = 39/244 (15%)
Query: 7 TIAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDEL 66
+A T + I F LG+ +P + I + FY V K L L
Sbjct: 177 PVAAFTATATPEVERDILFRLGLREPRL---IRASFDRP-NLFYHVLPKEEPHAQLLSFL 232
Query: 67 ADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------- 113
+SGI+Y ++ ++ E+ L+ +G++ AYHA L
Sbjct: 233 GG-----HAGESGIVYRSTRRKVEETAAFLQKKGVKAEAYHAGLPDAERMRVQEAFRRDE 287
Query: 114 -----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF 168
++AFG+GIDKP+VRFV H L K++E +YQE+GRAGRDG AHC+L Y D+
Sbjct: 288 CPVVVATVAFGMGIDKPDVRFVAHLDLPKNVEGYYQETGRAGRDGDPAHCLLLYSAADMA 347
Query: 169 KLSSMVFDQQT--------GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+L + F +QT + Y ++ Y ++ +CRR + SYF EA+ + C G CD
Sbjct: 348 QL--LYFARQTEDEEQRSIAEKHAYAMLEYA-ERNQCRRKALLSYFGEAFEEPNC-GGCD 403
Query: 221 HCRG 224
C G
Sbjct: 404 VCTG 407
>gi|52841103|ref|YP_094902.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|54296889|ref|YP_123258.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|397666546|ref|YP_006508083.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|52628214|gb|AAU26955.1| ATP-dependent DNA helicase RecQ [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|53750674|emb|CAH12081.1| hypothetical protein lpp0930 [Legionella pneumophila str. Paris]
gi|395129957|emb|CCD08190.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 92/176 (52%), Gaps = 25/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
QSGIIY + E L +L+ G + AYHA L V +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGFKARAYHAGLPHAVRREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 176 --DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDA 229
+Q+ N N + + + CRR I+ YFDE S TEC+ CD C + A
Sbjct: 357 LEEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVCDNPPQTA 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|346321418|gb|EGX91017.1| ATP-dependent DNA helicase recQ [Cordyceps militaris CM01]
Length = 478
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/195 (38%), Positives = 98/195 (50%), Gaps = 32/195 (16%)
Query: 53 RIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
R + +K+ L +L + R N GIIYT S ECE L LR +G+ +HAKL
Sbjct: 251 RRRAEPRKEELQQLGE----RVENVPGIIYTISRDECETLSAALRAQGIGARPFHAKLPK 306
Query: 113 NV--------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
+V + AFG+GIDK NVRFV+H L KS E +YQE+GRAGRD
Sbjct: 307 DVKEDTLSRWIKNEQGYDIIVATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQEAGRAGRD 366
Query: 153 GQIAHCILYYRLPDVFKLSSMV-FDQQTG------LANLYNIVSYCLDQTRCRRAIIASY 205
G ++C LYY D+ +++ MV D + G L +L + YC CR A I Y
Sbjct: 367 GNASYCFLYYSREDLERVTRMVKGDSKDGTSYQARLRSLQALALYCESIKSCRHAEICKY 426
Query: 206 FDEAWSDTECRGMCD 220
F E EC CD
Sbjct: 427 FGET-EIPECDFACD 440
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKNNVRFVVHWRLPKSFEGYYQ 358
>gi|392963657|ref|ZP_10329081.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
gi|387847620|emb|CCH51120.1| ATP-dependent DNA helicase RecQ [Fibrisoma limi BUZ 3]
Length = 715
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/248 (33%), Positives = 121/248 (48%), Gaps = 36/248 (14%)
Query: 2 FALLYTIAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKD 61
F + T+A L + IA LG++ P V + + S+ ++ P +
Sbjct: 176 FPTVPTVA-LTATADKLTRNDIAQRLGMNDPAVFIASFNRPNLSL------KVLPGTNR- 227
Query: 62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN-------- 113
L ++ L+ ++ + SGIIY S K E L +L+ +G + + YHAK++
Sbjct: 228 -LPQIIKLLQQK-PDTSGIIYCLSRKSTESLAAKLQEKGFKAAFYHAKMDPEDRAKTQEA 285
Query: 114 ----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
+IAFG+GIDK NVR+VIH+ L K++E+FYQE GRAGRDG A +L+Y
Sbjct: 286 FLRDDVRIMCATIAFGMGIDKSNVRWVIHYNLPKNIESFYQEIGRAGRDGAEAQTVLFYS 345
Query: 164 LPDVFKLSSMVFDQQTG-----LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM 218
DV M+ + LA L + Y D CRR I+ SYF E + C G
Sbjct: 346 FADVATYKDMLSESAPANLGLQLAKLERMQQYA-DANTCRRQILLSYFSEDLPEP-C-GN 402
Query: 219 CDHCRGGR 226
CD CR R
Sbjct: 403 CDVCRDPR 410
>gi|325284946|ref|YP_004260736.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
gi|324320400|gb|ADY27865.1| ATP-dependent DNA helicase RecQ [Cellulophaga lytica DSM 7489]
Length = 733
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 108/204 (52%), Gaps = 38/204 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
FY+VR P Q + AD++ RF Q SGI+Y S K+ E+L + L+ G+
Sbjct: 213 FYEVR--PKTQ----NIEADII--RFVKQNVGKSGIVYCLSRKKVEELAQVLQVNGISAV 264
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA ++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+
Sbjct: 265 PYHAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGIDKPDVRFVIHHDIPKSLESYYQET 324
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ +Y D+ KL V +Q+ G A L +V++ + + RR
Sbjct: 325 GRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQEIGNALLQEVVAFA-ETSMSRRKF 383
Query: 202 IASYFDEAWSDTECRG--MCDHCR 223
I YF E + + G M D+ R
Sbjct: 384 ILHYFGEEFDEVNGEGADMDDNTR 407
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 322
>gi|375359515|ref|YP_005112287.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
gi|301164196|emb|CBW23754.1| putative ATP-dependent DNA helicase [Bacteroides fragilis 638R]
Length = 607
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 202 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIVYCMSRSKT 245
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 246 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 305
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 306 HYNLPKSIESFYQEIGRAGRDGMASDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 365
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 366 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 397
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 288 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 318
>gi|424664440|ref|ZP_18101476.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
gi|404576022|gb|EKA80763.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis HMW 616]
Length = 601
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGIIY S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IVDFIARH-RGESGIIYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRDEAQDNFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-EADICRRRILLSYFGE--TATEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|302345889|ref|YP_003814242.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
gi|302148973|gb|ADK95235.1| ATP-dependent DNA helicase RecQ [Prevotella melaninogenica ATCC
25845]
Length = 727
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 104/197 (52%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P D ++ ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVR--PKKSDDDTNKQIIKFIKQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMEELDIIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ C+++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICVVFYSKKDLNKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C MCD+C
Sbjct: 388 FGEDYPKCNC-AMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|384171248|ref|YP_005552625.1| ATP-dependent DNA helicase RecQ [Arcobacter sp. L]
gi|345470858|dbj|BAK72308.1| ATP-dependent DNA helicase RecQ [Arcobacter sp. L]
Length = 706
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 118/243 (48%), Gaps = 37/243 (15%)
Query: 16 TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFR 75
T + IA L + P H +K++ + ++++P L L + +
Sbjct: 181 TKKVEADIASSLNLQNP------RHFRAKTVRDNLDIKVEPRIANGKTQILNFL--KTHK 232
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
GIIYT + KE E E L G AYHA L ++ +IA
Sbjct: 233 GLCGIIYTFTRKEAESTAEFLSENGYSAKAYHAGLSNDKKNEVFNDFVYEKIDIVVATIA 292
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD- 176
FG+GIDK N+RFVIH L K++EN+YQE GRAGRDG++++ + Y D K + +
Sbjct: 293 FGMGIDKSNIRFVIHTSLPKTLENYYQEIGRAGRDGEMSYVYMLYSKSDEVKRKIQIEEA 352
Query: 177 -----QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKR 231
+QTGL L + YC+ CR +IA YF++ C+ +CD+C G + ++
Sbjct: 353 IDNAYKQTGLDKLEFMYRYCVSNN-CRHKMIAGYFEDEIE--ACKTLCDNCTKG--EVEQ 407
Query: 232 VDV 234
VD+
Sbjct: 408 VDM 410
>gi|429724940|ref|ZP_19259801.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
gi|429151402|gb|EKX94270.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 473 str.
F0040]
Length = 728
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 24/179 (13%)
Query: 78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAFG 119
SGIIY S K E+L E LR + AYHA L++ V +IAFG
Sbjct: 236 SGIIYCLSRKRVEELTEVLRTNDINACAYHAGLDAQVRSNTQDAFLKEDIDVIVATIAFG 295
Query: 120 LGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM-----V 174
+GIDKP+VRFVIH+ + KS+E +YQE+GRAGRDG CI +Y D+ KL +
Sbjct: 296 MGIDKPDVRFVIHYDIPKSLEGYYQETGRAGRDGGEGLCIAFYSHKDLQKLEKFMEGKPI 355
Query: 175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVD 233
+Q G L +Y + CRR ++ YF E + + G CD+C+ + + D
Sbjct: 356 SEQDIGRQLLKETAAYA-ESAVCRRKLLLHYFGEQYESPDGCGNCDNCKHPHKQVEGKD 413
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|423722012|ref|ZP_17696188.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
gi|409242714|gb|EKN35474.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL09T00C40]
Length = 609
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 110/217 (50%), Gaps = 44/217 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ I LSK K+ + + ++R R QSGIIY S
Sbjct: 199 DRPNLSLTIRRGLSK---------------KEKIAAIVHFINRHHR-QSGIIYCMSRNST 242
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E L EEL +R AYHA L S+ ++AFG+GIDK NVR+VI
Sbjct: 243 ESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVI 302
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-----LANLYN 186
H+ + S+EN+YQE GRAGRDG + +L+Y + D+ L F +++G L L
Sbjct: 303 HYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRR--FAEESGQKDVSLQKLNR 360
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ YC + CRR I+ SYF E +D +C G CD C+
Sbjct: 361 MRRYC-EADICRRRILLSYFGEE-TDKDC-GNCDVCK 394
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ + S+EN+YQ
Sbjct: 286 TVAFGMGIDKSNVRWVIHYNMPASIENYYQ 315
>gi|441498157|ref|ZP_20980358.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
gi|441438064|gb|ELR71407.1| ATP-dependent DNA helicase RecQ [Fulvivirga imtechensis AK7]
Length = 728
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/196 (35%), Positives = 103/196 (52%), Gaps = 28/196 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR K A+K + L R + +SGI+Y S K+ ++ E L G + + YHA
Sbjct: 210 FYEVRQKKHAKKQLIQFL-----RDHKGKSGIVYCLSRKKVVEIAELLNVNGFKAAPYHA 264
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
LE V +IAFG+GIDKP+VRFV+H+ + KS+E +YQE+GR+G
Sbjct: 265 GLEPAVREKNQDDFLNEDVDIVVATIAFGMGIDKPDVRFVVHYDVPKSLEGYYQETGRSG 324
Query: 151 RDGQIAHCILYYRLPDVFKLSSMVFD----QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
RDG C+++Y D+ KL D ++ L +S+ + CRR + YF
Sbjct: 325 RDGLEGKCLMFYSHNDINKLEKFNKDKPVQERENARVLLQEMSFYAESPVCRRKQLLHYF 384
Query: 207 DEAWSDTECRGMCDHC 222
E ++ C MCD+C
Sbjct: 385 GEEFTFDNCE-MCDNC 399
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 19/30 (63%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ + KS+E +YQ
Sbjct: 289 TIAFGMGIDKPDVRFVVHYDVPKSLEGYYQ 318
>gi|341038504|gb|EGS23496.1| ATP-dependent helicase-like protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 421
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/234 (32%), Positives = 106/234 (45%), Gaps = 44/234 (18%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENF----------YQVRIKPAAQKDCLDELADLMSRRF 74
F + +PN+ + ++ + F Y R +P + + D + R
Sbjct: 155 FTMTAHRPNLHLEVRFTSDQANDRFDDFVTWLKGVYARRSQPERKAEL-----DAVGERV 209
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------- 114
+N GIIYT S ECE L LR + +HAKL V
Sbjct: 210 QNVPGIIYTLSRDECEMLAAALRQEEIGARPFHAKLPKEVKEETLARWIANEPGYDIIVA 269
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D ++ +MV
Sbjct: 270 TTAFGMGIDKENVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYAREDRDRVCNMV 329
Query: 175 F--------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+++ + +L +V YC CR A I YF E EC CD
Sbjct: 330 MRDGGPNDTNREARMRSLSRLVEYCESTDTCRHAFICKYFGEE-KVPECDYACD 382
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 269 ATTAFGMGIDKENVRFVVHWRLPKSFEGYYQ 299
>gi|423345823|ref|ZP_17323512.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
gi|409221558|gb|EKN14507.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae CL03T12C32]
Length = 609
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 110/217 (50%), Gaps = 44/217 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ I LSK K+ + + ++R R QSGIIY S
Sbjct: 199 DRPNLSLTIRRGLSK---------------KEKIAAIVHFINRHHR-QSGIIYCMSRNST 242
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E L EEL +R AYHA L S+ ++AFG+GIDK NVR+VI
Sbjct: 243 ESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVI 302
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-----LANLYN 186
H+ + S+EN+YQE GRAGRDG + +L+Y + D+ L F +++G L L
Sbjct: 303 HYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRR--FAEESGQKDVSLQKLNR 360
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ YC + CRR I+ SYF E +D +C G CD C+
Sbjct: 361 MRRYC-EADICRRRILLSYFGEE-TDKDC-GNCDVCK 394
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ + S+EN+YQ
Sbjct: 286 TVAFGMGIDKSNVRWVIHYNMPASIENYYQ 315
>gi|340346831|ref|ZP_08669950.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433652062|ref|YP_007278441.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
gi|339611048|gb|EGQ15888.1| ATP-dependent helicase RecQ [Prevotella dentalis DSM 3688]
gi|433302595|gb|AGB28411.1| ATP-dependent DNA helicase RecQ [Prevotella dentalis DSM 3688]
Length = 742
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/207 (33%), Positives = 115/207 (55%), Gaps = 29/207 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K +++D ++ + R+ +SGI+Y S K+ E+L ++L+ G + + YHA
Sbjct: 217 YYEVRPK-VSEEDTDSQIIRFL-RQHEGKSGIVYCLSRKKVEELSKKLQLNGFKAAPYHA 274
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ + +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 275 GLDTELRTKTQDDFLKEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 334
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-----FDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RD CI +Y D+ KL + +++ G L +Y + + CRR + Y
Sbjct: 335 RDDGEGICIAFYSPKDLKKLEKFMENKGEAEKEIGRQLLEETKAYA-ETSVCRRRFLLHY 393
Query: 206 FDEAWSDTECRGMCDHCRGGR--RDAK 230
F E + +C G CD+C+ + RDA+
Sbjct: 394 FGEEYPKPDC-GNCDNCKHPQKPRDAQ 419
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 299 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 328
>gi|124002830|ref|ZP_01687682.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
gi|123992058|gb|EAY31445.1| ATP-dependent DNA helicase RecQ [Microscilla marina ATCC 23134]
Length = 712
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 95/172 (55%), Gaps = 27/172 (15%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
NQSGIIY S K E + ++L++ G YHAK++SN +IA
Sbjct: 229 NQSGIIYCLSRKSTEQIAQKLKDAGFSADYYHAKMDSNRRAAVQQSFLKDDTHIICATIA 288
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD- 176
FG+GIDKPNVRFVIH+ + K++E +YQE GRAGRDG + IL+Y DV L + +
Sbjct: 289 FGMGIDKPNVRFVIHYNMPKNVEGYYQEIGRAGRDGLKSDAILFYSYGDVKILREFIHNI 348
Query: 177 -----QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ A L ++ + D CRR I+ +YF+E + +C G CD CR
Sbjct: 349 DNEGFKALQFAKLERMLQFA-DADICRRRILLNYFNENFQQ-DC-GNCDVCR 397
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFVIH+ + K++E +YQ
Sbjct: 285 ATIAFGMGIDKPNVRFVIHYNMPKNVEGYYQ 315
>gi|281425296|ref|ZP_06256209.1| hypothetical protein HMPREF0971_02268 [Prevotella oris F0302]
gi|281400589|gb|EFB31420.1| ATP-dependent DNA helicase RecQ [Prevotella oris F0302]
Length = 725
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D+ R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRPK----TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGLCIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C CD+C
Sbjct: 386 FGEEYPHDNCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|194366875|ref|YP_002029485.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia
R551-3]
gi|194349679|gb|ACF52802.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia
R551-3]
Length = 601
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 108/219 (49%), Gaps = 49/219 (22%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKD-CLDELADLMSRRFRNQSGIIYTTSIKE 88
D+PN+R+ + QKD +L D + R R+++GI+Y S ++
Sbjct: 202 DRPNIRYTV-------------------VQKDNARKQLGDFL-RSHRSEAGIVYCMSRRK 241
Query: 89 CEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFV 130
E+ E L +G YHA L S V +IAFG+GIDKP+VRFV
Sbjct: 242 VEETAEFLCTQGFNALPYHAGLPSEVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFV 301
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LAN 183
H L KSME +YQE+GRAGRDG+ A L Y L DV L M+ + G
Sbjct: 302 AHTDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERGK 361
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +++ YC + +CRR ++ + F E + C G CD+C
Sbjct: 362 LDHLLGYC-ESMQCRRQVLLAGFGETYPKP-C-GNCDNC 397
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KSME +YQ
Sbjct: 285 ATIAFGMGIDKPDVRFVAHTDLPKSMEGYYQ 315
>gi|299141494|ref|ZP_07034630.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
gi|298576830|gb|EFI48700.1| ATP-dependent DNA helicase RecQ [Prevotella oris C735]
Length = 725
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 71/197 (36%), Positives = 103/197 (52%), Gaps = 29/197 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + +D+ R+ +SGIIY S K+ E+L E L+ ++ + YHA
Sbjct: 211 YYEVRPK----TNDVDKQIIKFIRQHEGKSGIIYCLSRKKVEELAEVLKANEIKAAPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGLCIAFYAQKDLKKLEKFMEGKPVAEQDIGRQLLQETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C CD+C
Sbjct: 386 FGEEYPHDNCHN-CDNC 401
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|265765824|ref|ZP_06093865.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
gi|263253492|gb|EEZ24957.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 2_1_16]
Length = 607
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 202 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIVYCMSRSKT 245
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 246 ETVAQMLQKHGIRCGVYHAGLSARQRDETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 305
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 306 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 365
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 366 QYA-ESDICRRRILLSYFGE--TTTEDCGNCDVCR 397
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 288 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 318
>gi|423223965|ref|ZP_17210433.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
gi|392637198|gb|EIY31072.1| ATP-dependent DNA helicase RecQ [Bacteroides cellulosilyticus
CL02T12C19]
Length = 611
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 109/215 (50%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS +++ YQ + K A D + R R +SGIIY S +
Sbjct: 205 DRPN--------LSLTVKRGYQQKEKSKAILDFIG--------RHRGESGIIYCMSRSKT 248
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ +G R + YHA L S +IAFG+GIDK NVR+VI
Sbjct: 249 ETVAQMLQKQGFRAAVYHAGLSSARRDEAQDDFINDRVQIVCATIAFGMGIDKSNVRWVI 308
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + +L+Y L D+ L+ + Q L L +
Sbjct: 309 HYNLPKSIESFYQEIGRAGRDGLPSDTLLFYSLADLILLTKFATESGQQGINLEKLQRMQ 368
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF EA TE G CD C+
Sbjct: 369 QYA-EADVCRRRILLSYFGEA--TTEDCGNCDVCK 400
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 292 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 321
>gi|344208534|ref|YP_004793675.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia JV3]
gi|343779896|gb|AEM52449.1| ATP-dependent DNA helicase RecQ [Stenotrophomonas maltophilia JV3]
Length = 601
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 76/219 (34%), Positives = 108/219 (49%), Gaps = 49/219 (22%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKD-CLDELADLMSRRFRNQSGIIYTTSIKE 88
D+PN+R+ + QKD +L D + R R ++GI+Y S ++
Sbjct: 202 DRPNIRYTV-------------------VQKDNARKQLTDFL-RGHRGEAGIVYCMSRRK 241
Query: 89 CEDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFV 130
E+ E L +G YHA L +V +IAFG+GIDKP+VRFV
Sbjct: 242 VEETAEFLCGQGFNALPYHAGLPPDVRANNQRRFLREDGIVMCATIAFGMGIDKPDVRFV 301
Query: 131 IHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-------LAN 183
H L KSME +YQE+GRAGRDG+ A L Y L DV L M+ + G A
Sbjct: 302 AHTDLPKSMEGYYQETGRAGRDGEAAEAWLCYGLGDVVLLKQMIEQSEAGEERKQLERAK 361
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +++ YC + +CRR ++ + F E + C G CD+C
Sbjct: 362 LDHLLGYC-ESMQCRRQVLLAGFGETYPQP-C-GNCDNC 397
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KSME +YQ
Sbjct: 285 ATIAFGMGIDKPDVRFVAHTDLPKSMEGYYQ 315
>gi|417714622|ref|ZP_12363574.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|417719543|ref|ZP_12368424.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
gi|332998230|gb|EGK17832.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-272]
gi|333013771|gb|EGK33134.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-227]
Length = 609
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 117/216 (54%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 209 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 249
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L+++G+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 250 EDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 309
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++Q G L ++ N
Sbjct: 310 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKQQGQLQDIERHKLN 369
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 370 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 322
>gi|153003768|ref|YP_001378093.1| ATP-dependent DNA helicase RecQ [Anaeromyxobacter sp. Fw109-5]
gi|152027341|gb|ABS25109.1| ATP-dependent DNA helicase, RecQ family [Anaeromyxobacter sp.
Fw109-5]
Length = 605
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 117/242 (48%), Gaps = 40/242 (16%)
Query: 11 LNLWRTSFYQVS--IAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELAD 68
L L T+ +V+ IA LG+++P V+ + + + V K D L
Sbjct: 265 LALTATATPEVTHDIAAQLGMERP---LVVRGSFLRRNLSLHAV--KKGEGLRTRDALVR 319
Query: 69 LMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------- 114
L+ R + +SGI+Y S K E+ LR G+R AYHA LE +V
Sbjct: 320 LVRAR-KGESGIVYALSRKSVEETAALLREHGVRAEAYHAGLEPDVRARVQDAFQSGAID 378
Query: 115 ----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL 170
++AFG+GIDKP++RFVIH L +S+E++YQE GRAGRDG+ + C+L+Y DV
Sbjct: 379 VVAATVAFGMGIDKPDIRFVIHRDLPRSIESYYQEIGRAGRDGKPSTCVLFYSWADVMSW 438
Query: 171 SSMVFDQQTGLAN--------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ D + LA +Y + D CR + +F E + C CD C
Sbjct: 439 ERLLGDVEPELAEAQLRQTRAMYRLA----DGDGCRHERVVGHFGEVVAP--CGDACDRC 492
Query: 223 RG 224
G
Sbjct: 493 SG 494
>gi|402492603|ref|ZP_10839363.1| ATP-dependent DNA helicase RecQ [Aquimarina agarilytica ZC1]
Length = 728
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 75/208 (36%), Positives = 109/208 (52%), Gaps = 38/208 (18%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQ----SGIIYTTSIKECEDLREELRNRGLRVS 104
FY+VR K A + D++ RF Q SGIIY S K E+L + L+ G+
Sbjct: 211 FYEVRPKTANVE------TDII--RFVKQNTGKSGIIYCLSRKRVEELAQALQVNGINAV 262
Query: 105 AYHAKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQES 146
YHA L++ +IAFG+GIDKP+VRFV+H+ + KS+E++YQE+
Sbjct: 263 PYHAGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVVHYDIPKSIESYYQET 322
Query: 147 GRAGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAI 201
GRAGRDG HC+ YY D+ KL V +Q+ G A L +V++ + + RR
Sbjct: 323 GRAGRDGGEGHCLAYYAYKDIEKLEKFMSGKPVAEQEIGNALLQEVVAFA-ETSISRRKF 381
Query: 202 IASYFDEAWSDTECRG--MCDHCRGGRR 227
I YF E + + G M D+ R ++
Sbjct: 382 ILHYFGEEFDEVTGDGGDMDDNVRNPKK 409
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/30 (63%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H+ + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVVHYDIPKSIESYYQ 320
>gi|336263768|ref|XP_003346663.1| hypothetical protein SMAC_04096 [Sordaria macrospora k-hell]
gi|380091369|emb|CCC10865.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 463
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 92/187 (49%), Gaps = 35/187 (18%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
D+ R N SGIIYT S E E L LR+ G+ +HAKL +
Sbjct: 241 DVTGERVENVSGIIYTISRDEVESLAAALRHDGIGARPFHAKLSNQTKEETLAKWIANEP 300
Query: 115 -------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D
Sbjct: 301 GYDIIVATTAFGMGIDKENVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDR 360
Query: 168 FKLSSMVF--------------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDT 213
++ ++V ++Q +L +V+YC D + CR A I YF E
Sbjct: 361 DRVCNLVAREPVSKHAGANGINNKQARQESLSRLVAYCEDTSSCRHAAICRYFGET-QVP 419
Query: 214 ECRGMCD 220
EC CD
Sbjct: 420 ECDYACD 426
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 307 ATTAFGMGIDKENVRFVVHWRLPKSFEGYYQ 337
>gi|374587401|ref|ZP_09660493.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
gi|373876262|gb|EHQ08256.1| ATP-dependent DNA helicase RecQ [Leptonema illini DSM 21528]
Length = 617
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 107/222 (48%), Gaps = 45/222 (20%)
Query: 25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTT 84
F G D+PN+ F +V K ++ L + + R R+Q+GIIY
Sbjct: 214 FVAGFDRPNL--------------FIEVLPK----QNALTQTLRFLEER-RDQAGIIYCF 254
Query: 85 SIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPN 126
S ++ +DL L +G YHA L +IAFG+GI+KPN
Sbjct: 255 SRRQVDDLAAALVQKGFSARPYHAGLGDAERAANQEAFLRDDIQIIVATIAFGMGINKPN 314
Query: 127 VRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ------TG 180
VRFVIH+ L KS+E +YQE GRAGRDG +HC+L Y DV KL + DQ+
Sbjct: 315 VRFVIHYDLPKSIEGYYQEIGRAGRDGLPSHCLLLYSYGDVAKLRHFI-DQKEEDERLVA 373
Query: 181 LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +L +V + CRR + YF E + T C CD+C
Sbjct: 374 LEHLDALVRFAEQHAGCRRIPLLRYFGEEPTSTRC-DRCDNC 414
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVRFVIH+ L KS+E +YQ
Sbjct: 303 TIAFGMGINKPNVRFVIHYDLPKSIEGYYQ 332
>gi|218245896|ref|YP_002371267.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
gi|218166374|gb|ACK65111.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8801]
Length = 709
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 27/175 (15%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R + SGI+Y S + +D+ L+N G++ YHA +
Sbjct: 231 RQQKGSGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVA 290
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ L D+ K+ ++
Sbjct: 291 TIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLI 350
Query: 175 ------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+Q+ L +V Y + T CRR I+ YF E ++ C G CD+CR
Sbjct: 351 DQKSTPQEQKIARQQLRQVVDYA-EGTECRRTIVLRYFGERFAGN-C-GKCDNCR 402
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFVIH+ L +++E +YQ
Sbjct: 290 ATIAFGMGINKPDVRFVIHYDLPRNLEGYYQ 320
>gi|154492528|ref|ZP_02032154.1| hypothetical protein PARMER_02162 [Parabacteroides merdae ATCC
43184]
gi|154087753|gb|EDN86798.1| ATP-dependent DNA helicase RecQ [Parabacteroides merdae ATCC 43184]
Length = 621
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 79/217 (36%), Positives = 110/217 (50%), Gaps = 44/217 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ I LSK K+ + + ++R R QSGIIY S
Sbjct: 211 DRPNLSLTIRRGLSK---------------KEKIAAIVHFINRHHR-QSGIIYCMSRNST 254
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E L EEL +R AYHA L S+ ++AFG+GIDK NVR+VI
Sbjct: 255 ESLVEELSEYSIRAVAYHAGLSSDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVI 314
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-----LANLYN 186
H+ + S+EN+YQE GRAGRDG + +L+Y + D+ L F +++G L L
Sbjct: 315 HYNMPASIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRR--FAEESGQKDVCLQKLNR 372
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ YC + CRR I+ SYF E +D +C G CD C+
Sbjct: 373 MRRYC-EADICRRRILLSYFGEE-TDKDC-GNCDVCK 406
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ + S+EN+YQ
Sbjct: 298 TVAFGMGIDKSNVRWVIHYNMPASIENYYQ 327
>gi|422302785|ref|ZP_16390144.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
gi|389787941|emb|CCI16794.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9806]
Length = 703
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/242 (33%), Positives = 119/242 (49%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SN---------- 113
+GI+Y S K + + E+L+ G+ YHA +E SN
Sbjct: 236 ----------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + T CRR+ + YF E++S C CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGTECRRSSVLGYFGESFSGN-C-ANCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|359437026|ref|ZP_09227101.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
gi|358028285|dbj|GAA63350.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20311]
Length = 607
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYL-----KEQKNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E +YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREPC-GNCDIC 405
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E +YQ
Sbjct: 294 ATVAFGMGINKPNVRFVLHYDIPKSIEAYYQ 324
>gi|357441847|ref|XP_003591201.1| Bloom syndrome protein-like protein [Medicago truncatula]
gi|355480249|gb|AES61452.1| Bloom syndrome protein-like protein [Medicago truncatula]
Length = 603
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/231 (32%), Positives = 115/231 (49%), Gaps = 47/231 (20%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGII 81
+I D+PN++ Y+V +K K+ L +L L+ RF++Q GI+
Sbjct: 385 AIVLERSFDRPNLK--------------YEVIVK---TKEPLKQLGQLLMDRFKSQCGIV 427
Query: 82 YTTSIKECEDLREELRNR-GLRVSAYHAKLESN------------------VSIAFGLGI 122
Y S EC D+ + L + ++ + YHA L + +IAFG+GI
Sbjct: 428 YCLSKSECVDVSKFLNEKCKIKAAYYHAGLAARQRVAVQKKWHDGEVHIVCATIAFGMGI 487
Query: 123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ---- 178
DK +VRFVIH+ +SKS+E++YQESGRAGRD A CI Y+ D ++ M+ + Q
Sbjct: 488 DKADVRFVIHNTMSKSIESYYQESGRAGRDNLPAVCIALYQKKDFSRVVCMIRNGQGYKK 547
Query: 179 ----TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECR---GMCDHC 222
T +A + YC + CRR + +F E++ C+ CD+C
Sbjct: 548 ESFKTAMAQAKKMQQYCELKDECRRQTLLEHFGESFDRKNCKYGSSPCDNC 598
>gi|315127615|ref|YP_004069618.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
gi|315016129|gb|ADT69467.1| ATP-dependent DNA helicase [Pseudoalteromonas sp. SM9913]
Length = 607
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYL-----KEQKNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E +YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREPC-GNCDIC 405
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E +YQ
Sbjct: 295 TVAFGMGINKPNVRFVLHYDIPKSIEAYYQ 324
>gi|257058944|ref|YP_003136832.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
gi|256589110|gb|ACU99996.1| ATP-dependent DNA helicase RecQ [Cyanothece sp. PCC 8802]
Length = 709
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/175 (36%), Positives = 97/175 (55%), Gaps = 27/175 (15%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R + SGI+Y S + +D+ L+N G++ YHA +
Sbjct: 231 RQQKGSGIVYCLSRRSVDDIAFRLQNDGIKALPYHAGMADEARALNQNRFIRDDVQVMVA 290
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ L D+ K+ ++
Sbjct: 291 TIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAECTLFFSLSDLKKIEYLI 350
Query: 175 ------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+Q+ L +V Y + T CRR I+ YF E ++ C G CD+CR
Sbjct: 351 DQKSTPQEQKIARQQLRQVVDYA-EGTECRRTIVLRYFGERFAGN-C-GKCDNCR 402
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFVIH+ L +++E +YQ
Sbjct: 291 TIAFGMGINKPDVRFVIHYDLPRNLEGYYQ 320
>gi|359446850|ref|ZP_09236489.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
gi|358039322|dbj|GAA72738.1| ATP-dependent DNA helicase RecQ [Pseudoalteromonas sp. BSi20439]
Length = 607
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/216 (34%), Positives = 111/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + +NQSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYL-----KEQKNQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E +YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIEAYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREPC-GNCDIC 405
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E +YQ
Sbjct: 295 TVAFGMGINKPNVRFVLHYDIPKSIEAYYQ 324
>gi|288929614|ref|ZP_06423458.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
gi|288329119|gb|EFC67706.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 317 str.
F0108]
Length = 725
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 74/208 (35%), Positives = 110/208 (52%), Gaps = 31/208 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR P Q+ ++ + R+ +SGIIY S K+ E+L L+ ++ YHA
Sbjct: 211 YYEVR--PKTQE--VERNIIMFIRQHAGKSGIIYCLSRKKVEELSAILKANNIKAEPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 267 GLDSATRSQTQDDFLMERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKL-----SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG CI +Y D+ KL S V +Q G L +Y + + CRR ++ Y
Sbjct: 327 RDGGEGLCITFYSNKDLQKLEKFMESKPVAEQDIGRQLLLETAAYA-ESSVCRRKMLLHY 385
Query: 206 FDEAWSDTECRGMCDHC--RGGRRDAKR 231
F E +++ C CD+C +R+AK
Sbjct: 386 FGEDYTEDNCHN-CDNCLHPKTKREAKE 412
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 282 MERIDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 320
>gi|451846770|gb|EMD60079.1| hypothetical protein COCSADRAFT_100311 [Cochliobolus sativus
ND90Pr]
Length = 485
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/192 (39%), Positives = 95/192 (49%), Gaps = 41/192 (21%)
Query: 71 SRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN----------------- 113
++R N GIIYT K+CE L E LR+ G+ YHA L +
Sbjct: 262 NQRTDNVPGIIYTLFRKDCESLAERLRSDGIGAKPYHAGLSVSERADALSSWIANKPGYD 321
Query: 114 ---VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKL 170
+ AFG+GIDK NVRFV+H + KS E FYQE+GRAGRDG+ + CILYY D +
Sbjct: 322 IIVATTAFGMGIDKENVRFVVHWQIPKSFEGFYQEAGRAGRDGKASLCILYYGREDRDRA 381
Query: 171 SSMVF--------------DQQTGLAN----LYNIVSYCLDQTRCRRAIIASYF-DEAWS 211
++M+ QQ L N L +V YC +CR IIA YF DEA
Sbjct: 382 ANMMARDTARQPSKSGGPDAQQQQLMNRARSLQALVGYCEATDKCRHKIIAKYFADEA-- 439
Query: 212 DTECRGMCDHCR 223
C CD C+
Sbjct: 440 PAPCDFACDWCK 451
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H + KS E FYQ
Sbjct: 325 ATTAFGMGIDKENVRFVVHWQIPKSFEGFYQ 355
>gi|423261207|ref|ZP_17242109.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|423267342|ref|ZP_17246324.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
gi|387774449|gb|EIK36560.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T00C01]
gi|392698045|gb|EIY91228.1| ATP-dependent DNA helicase RecQ [Bacteroides fragilis CL07T12C05]
Length = 601
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 80/215 (37%), Positives = 110/215 (51%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS S++ YQ + K A + D ++R R +SGI+Y S +
Sbjct: 196 DRPN--------LSLSVKRGYQPKEKSKA-------IIDFITRH-RGESGIVYCMSRSKT 239
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L+ G+R YHA L + +IAFG+GIDK NVR+VI
Sbjct: 240 ETVAQMLQKHGIRCGVYHAGLSARQRNETQDDFINDRIEVVCATIAFGMGIDKSNVRWVI 299
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+E+FYQE GRAGRDG + IL+Y L D+ L+ + Q L L +
Sbjct: 300 HYNLPKSIESFYQEIGRAGRDGMPSDTILFYSLGDLILLTKFATESNQQNINLEKLNRMQ 359
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ SYF E + TE G CD CR
Sbjct: 360 QYA-ESDICRRRILLSYFGE--TATEDCGNCDVCR 391
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 282 ATIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|374597031|ref|ZP_09670035.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
gi|373871670|gb|EHQ03668.1| ATP-dependent DNA helicase, RecQ family [Gillisia limnaea DSM
15749]
Length = 732
Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 66/176 (37%), Positives = 94/176 (53%), Gaps = 26/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K E+L + L+ G++ YHA L+ +IAF
Sbjct: 237 KSGIIYCLSRKRVEELAQTLQVNGIKAVPYHAGLDPKTRIRHQDMFIMEDTDVVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VRFVIHH + KS+E++YQE+GRAGRDG HC+ +Y D+ KL
Sbjct: 297 GMGIDKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKP 356
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCRGGRR 227
V +Q+ G A L +V Y + + RR + YF E + G M D+ R ++
Sbjct: 357 VAEQEIGQALLQEVVGYA-ETSMSRRQFLLHYFGEEFDIKTGEGANMDDNVRNPKK 411
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSLESYYQ 322
>gi|392402666|ref|YP_006439278.1| ATP-dependent DNA helicase RecQ [Turneriella parva DSM 21527]
gi|390610620|gb|AFM11772.1| ATP-dependent DNA helicase RecQ [Turneriella parva DSM 21527]
Length = 617
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 95/180 (52%), Gaps = 26/180 (14%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV----------------- 114
R N+SGIIY S + ++L L +RG V YHA L +
Sbjct: 239 RDHPNESGIIYCFSKAQVDELATMLTSRGFSVKPYHAGLADTMRAKNQQLFIRDDVQIIV 298
Query: 115 -SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
+IAFG+GI+KPNVRFVIH+ L K++E++YQE GRAGRDG A C L Y D K+
Sbjct: 299 ATIAFGMGINKPNVRFVIHYDLPKNIESYYQEIGRAGRDGLKADCFLLYSHSDSQKIKFF 358
Query: 174 V-----FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRD 228
+ +++T LA L N+V+Y + CRR + YF E D C G CD C +D
Sbjct: 359 ISQKEEAEKRTALAQLANLVAYA-ESDACRRYTLLEYFGEQAQD-RC-GACDICLNPPKD 415
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KPNVRFVIH+ L K++E++YQ
Sbjct: 300 TIAFGMGINKPNVRFVIHYDLPKNIESYYQ 329
>gi|85709456|ref|ZP_01040521.1| ATP-dependent DNA helicase RecQ [Erythrobacter sp. NAP1]
gi|85688166|gb|EAQ28170.1| ATP-dependent DNA helicase RecQ [Erythrobacter sp. NAP1]
Length = 591
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 105/219 (47%), Gaps = 48/219 (21%)
Query: 28 GIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIK 87
G D+PN+++ I ++ ++AD ++R +GIIY TS K
Sbjct: 198 GFDRPNIQYAIQ------------------PRQGAPKQIADFIART--PGAGIIYGTSRK 237
Query: 88 ECEDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRF 129
CEDL +L G V YHA L +IAFG+GIDKP+VRF
Sbjct: 238 GCEDLAAKLEQTGRPVGVYHAGLPPEERAATQARFVESEDMVMVATIAFGMGIDKPDVRF 297
Query: 130 VIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANL----- 184
V+H L KS+E +YQE+GRAGRDG A ++ + D K + D G A L
Sbjct: 298 VVHAGLPKSIEAYYQETGRAGRDGDPAEALMLWSASDFAKARQWLGD--VGEARLQSERA 355
Query: 185 -YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
N ++ ++ +CRR I+ +F E + C G CD+C
Sbjct: 356 RLNSLAGLVEAAQCRRQILLKHFGEDLPEP-C-GNCDNC 392
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 26/31 (83%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV+H L KS+E +YQ
Sbjct: 282 ATIAFGMGIDKPDVRFVVHAGLPKSIEAYYQ 312
>gi|399927001|ref|ZP_10784359.1| ATP-dependent DNA helicase RecQ1 [Myroides injenensis M09-0166]
Length = 731
Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 68/200 (34%), Positives = 105/200 (52%), Gaps = 30/200 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY++R K K+ ++ + + +SG+IY S K+ E++ L+ G+ YHA
Sbjct: 212 FYEIRPK---TKNIESDIIRFIKQN-AGKSGVIYCLSRKKVEEIANVLQVNGISAVPYHA 267
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VR+VIHH + KS+E++YQE+GRAG
Sbjct: 268 GLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRAG 327
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL + +Q+ G A L +V Y + + RR + Y
Sbjct: 328 RDGGEGHCLAYYSYKDIEKLEKFMAGKPIAEQEIGFALLQEVVGYA-ETSMSRRKFLLHY 386
Query: 206 FDEAWSDTECRG--MCDHCR 223
F E + + G M D+ R
Sbjct: 387 FGEEFDEVNGEGADMDDNVR 406
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHHDIPKSLESYYQ 321
>gi|149372419|ref|ZP_01891607.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
gi|149354809|gb|EDM43372.1| ATP-dependent DNA helicase recQ [unidentified eubacterium SCB49]
Length = 730
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 70/204 (34%), Positives = 108/204 (52%), Gaps = 30/204 (14%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR ++ +D ++ +SGIIY S K E+L + L+ G++ YHA
Sbjct: 211 YYEVR----SKTKNIDSDITRFVKQNEGKSGIIYCLSRKRVEELAQILQVNGIKAVPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIH+ + KS+E++YQE+GRAG
Sbjct: 267 GLDAKTRVRHQDMFLMEECDVVVATIAFGMGIDKPDVRFVIHNDMPKSIESYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ YY D+ KL V +Q+ G A L +V++ + + RR I Y
Sbjct: 327 RDGGEGHCLAYYSYKDIEKLEKFMSGKPVAEQEIGHALLQEMVAFA-ETSMSRRKFILHY 385
Query: 206 FDEAWSDTECRG--MCDHCRGGRR 227
F E + + G M D+ R ++
Sbjct: 386 FGEDFDNETGEGGDMDDNMRHPKK 409
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHNDMPKSIESYYQ 320
>gi|423239789|ref|ZP_17220905.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
gi|392645829|gb|EIY39552.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL03T12C01]
Length = 605
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 25/186 (13%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---- 114
QKD + + + + +N+ GIIY S + E++ L +G+R + YHA L S++
Sbjct: 210 QKDKARTILEFIEKH-KNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKA 268
Query: 115 --------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK NVR+VIH+ L KS+E+FYQE GRAGRDG + +L
Sbjct: 269 QNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLL 328
Query: 161 YYRLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
+Y L D+ LS + Q+ L L+ + Y + CRR I+ +YF E D +C G
Sbjct: 329 FYSLGDLVMLSKFATESSQQEINLEKLHRMQQYA-ESDICRRRILLNYFGETM-DHDC-G 385
Query: 218 MCDHCR 223
CD CR
Sbjct: 386 NCDVCR 391
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|367034884|ref|XP_003666724.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
gi|347013997|gb|AEO61479.1| hypothetical protein MYCTH_2072733 [Myceliophthora thermophila ATCC
42464]
Length = 485
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 72/188 (38%), Positives = 88/188 (46%), Gaps = 36/188 (19%)
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------- 114
D R N GIIYT S ECE L LR + +HAKL V
Sbjct: 261 DATGERVENVPGIIYTLSRDECESLAAALRCDEIGARPFHAKLPKEVKEETLARWIANEP 320
Query: 115 -------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV 167
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D
Sbjct: 321 GYDIIVATTAFGMGIDKENVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYAREDR 380
Query: 168 FKLSSMVF---------------DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD 212
++ +MV ++Q L +L +V YC D CR A I YF E
Sbjct: 381 DRVCNMVMRDGPGSGAGGAGSAKNKQARLESLSRLVEYCEDTNTCRHAAICRYFGEE-QV 439
Query: 213 TECRGMCD 220
EC CD
Sbjct: 440 PECDYACD 447
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 327 ATTAFGMGIDKENVRFVVHWRLPKSFEGYYQ 357
>gi|212693848|ref|ZP_03301976.1| hypothetical protein BACDOR_03370 [Bacteroides dorei DSM 17855]
gi|237708472|ref|ZP_04538953.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
gi|212663600|gb|EEB24174.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei DSM 17855]
gi|229457401|gb|EEO63122.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 9_1_42FAA]
Length = 605
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 103/186 (55%), Gaps = 25/186 (13%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---- 114
QKD + + + + +N+ GIIY S + E++ L +G+R + YHA L S++
Sbjct: 210 QKDKARTILEFIEKH-KNECGIIYCMSRSKTENVAAMLMKQGIRATVYHAGLSSDMRDKA 268
Query: 115 --------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK NVR+VIH+ L KS+E+FYQE GRAGRDG + +L
Sbjct: 269 QNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLL 328
Query: 161 YYRLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
+Y L D+ LS + Q+ L L+ + Y + CRR I+ +YF E D +C G
Sbjct: 329 FYSLGDLVMLSKFATESSQQEINLEKLHRMQQYA-ESDICRRRILLNYFGETM-DHDC-G 385
Query: 218 MCDHCR 223
CD CR
Sbjct: 386 NCDVCR 391
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|325954269|ref|YP_004237929.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
gi|323436887|gb|ADX67351.1| ATP-dependent DNA helicase RecQ [Weeksella virosa DSM 16922]
Length = 731
Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 71/210 (33%), Positives = 114/210 (54%), Gaps = 33/210 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FY+VR P +D E+ + +R + +SG++Y S K+ E+L + L+ G++ YHA
Sbjct: 212 FYEVR--PKINQD--KEIVKFIKKR-QGKSGVVYCLSRKKVEELTQLLQVNGIKAIPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L++ +IAFG+GIDKP+VRFVIH+ + KS+E++YQE+GRAG
Sbjct: 267 GLDAKTRSKHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHYDIPKSLESYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKL-----SSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y D+ KL S V +++ G+ L + +Y + + RR + Y
Sbjct: 327 RDGGEGECVAFYDYKDIEKLEKFLASKPVAEREIGMQLLNEVAAYA-ETSMSRRKFLLHY 385
Query: 206 FDEAWSDTECRG--MCDHCRGGRR--DAKR 231
F E + + G M D+ R ++ DA R
Sbjct: 386 FGEEFDEVNGAGANMDDNMRNPKKMMDATR 415
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDIPKSLESYYQ 320
>gi|224827278|ref|ZP_03700371.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
gi|224600491|gb|EEG06681.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania ferrooxidans
2002]
Length = 628
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 102/199 (51%), Gaps = 33/199 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV K A+K +L + + + SGI+Y S K ED + L G+R YHA
Sbjct: 233 FYQVVEKHNAKK----QLLAFIQQDYPGASGIVYCLSRKRVEDTAQWLVENGIRALPYHA 288
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L V ++AFG+GIDKP+VRFV H L KS ENFYQESGRAG
Sbjct: 289 GLGHEVRDRHQREFLREDGVVMVATVAFGMGIDKPDVRFVAHIDLPKSPENFYQESGRAG 348
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-------VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG A L Y L D+ +L+ M V +Q L+ L ++++C + CRR I
Sbjct: 349 RDGLPAASWLCYGLNDMVQLTQMIEGSEMAVLQKQVELSKLDAMLAFC-ETAACRRQHIL 407
Query: 204 SYFDEAWSDTECRGMCDHC 222
++F E C G CD+C
Sbjct: 408 AHFSE--QSAPC-GHCDNC 423
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/31 (67%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV H L KS ENFYQ
Sbjct: 312 ATVAFGMGIDKPDVRFVAHIDLPKSPENFYQ 342
>gi|150392373|ref|YP_001322422.1| ATP-dependent DNA helicase RecQ [Alkaliphilus metalliredigens QYMF]
gi|149952235|gb|ABR50763.1| ATP-dependent DNA helicase RecQ [Alkaliphilus metalliredigens QYMF]
Length = 726
Score = 114 bits (284), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 110/228 (48%), Gaps = 45/228 (19%)
Query: 20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSG 79
Q I G D+PN+ FYQV + + L + F++++G
Sbjct: 190 QKPIEITTGFDRPNL--------------FYQV----SKAGNKFTYLMSYLKENFQSETG 231
Query: 80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSI------------------AFGLG 121
IIY ++ K E L ++L+ +G V YH + +++ + AFG+G
Sbjct: 232 IIYCSTRKTVESLVKKLKEKGFSVEGYHGGMNADIRMKNQEDFMYNRTRIIVATNAFGMG 291
Query: 122 IDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD----- 176
IDKP+VRFVIH+ + K+ME +YQE+GR GRDG+ + CIL Y DV K ++ +
Sbjct: 292 IDKPDVRFVIHYNMPKNMEAYYQEAGRGGRDGEKSQCILMYSPSDVVKQKLIMENEYSSP 351
Query: 177 --QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
Q NL ++ +C C R I +YF E + +C G C +C
Sbjct: 352 ERQALQYKNLQYLIDFC-HTNDCLRNKILTYFGEVIIEEDC-GNCSNC 397
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
RT + AFG+GIDKP+VRFVIH+ + K+ME +YQ
Sbjct: 278 RTRIIVATNAFGMGIDKPDVRFVIHYNMPKNMEAYYQ 314
>gi|429856808|gb|ELA31702.1| ATP-dependent DNA helicase recq [Colletotrichum gloeosporioides
Nara gc5]
Length = 477
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 68/175 (38%), Positives = 88/175 (50%), Gaps = 28/175 (16%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R N SGIIYT S ECE L LR+ G+ +HAKL
Sbjct: 267 RLDNVSGIIYTISRDECESLAAALRDEGVGARPFHAKLTKETKEQTLSRWVKNEPGYDII 326
Query: 115 --SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
+ AFG+GIDK +VRFV+H L KS E +YQE+GRAGRDG + C LYY D+ ++ S
Sbjct: 327 VATTAFGMGIDKNDVRFVVHWRLPKSFEGYYQEAGRAGRDGNASFCFLYYSREDLQRVQS 386
Query: 173 MV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
M+ + + +L + YC D T CR A I YF E+ +C CD
Sbjct: 387 MIRKGNRDGSNWEAQAKSLQRLAFYCEDTTACRHAQICKYFGES-EMPKCDYACD 440
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK +VRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKNDVRFVVHWRLPKSFEGYYQ 358
>gi|426194397|gb|EKV44328.1| hypothetical protein AGABI2DRAFT_208513 [Agaricus bisporus var.
bisporus H97]
Length = 674
Score = 114 bits (284), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 104/203 (51%), Gaps = 32/203 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---NRGLRVSAY 106
Y++ KP+ + D + N +GI+Y + K+ E++ +EL+ + ++ Y
Sbjct: 243 YRIVPKPSRGAAMTKAMVDYILEHHPNDTGIVYCLTKKDSENVAKELQEFSDNKIKTGIY 302
Query: 107 H--------AKLESN----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H AKL + +IAFGLGIDK +VRFV+HH SKS+E FYQESGR
Sbjct: 303 HSERADSEKAKLHKDWRDGNIKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGFYQESGR 360
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF-- 206
AGRDG+ A CILYYR D K+ +M + G ++ ++ + D CR+ A YF
Sbjct: 361 AGRDGKDADCILYYRPQDATKVLAMTTSDKLGQQKVHAVLEFAEDLVECRKIQFAKYFSH 420
Query: 207 -----DEAWS--DTECRGMCDHC 222
+W+ D + C HC
Sbjct: 421 SSSLSISSWTTEDQDALERCGHC 443
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH SKS+E FYQ
Sbjct: 318 WRDGNIKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGFYQ 356
>gi|37522198|ref|NP_925575.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
gi|35213198|dbj|BAC90570.1| ATP-dependent DNA helicase [Gloeobacter violaceus PCC 7421]
Length = 746
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 64/176 (36%), Positives = 95/176 (53%), Gaps = 26/176 (14%)
Query: 72 RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV----------------- 114
RR S I+Y S + E L E L GL YHA + + +
Sbjct: 242 RRLDGASAIVYCQSRRAVEALAERLVADGLNALPYHAGMAAEMRSRHQTQFLRDDAPVLV 301
Query: 115 -SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
++AFG+GI KP+VR V H+ L +++E +YQESGRAGRDGQ A C+L++ D K+ +
Sbjct: 302 ATVAFGMGIAKPDVRAVFHYELPRNLEGYYQESGRAGRDGQPADCVLFFSPGDRAKIEYL 361
Query: 174 V------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
V +Q+ + L +++Y + T CRR I+ YF EA ++ +C G CD+CR
Sbjct: 362 VAQKSDPHEQRLARSQLAQMLAYA-ESTVCRRRILLGYFGEALAEADCGG-CDNCR 415
>gi|192293669|ref|YP_001994274.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
gi|192287418|gb|ACF03799.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris TIE-1]
Length = 616
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 105/219 (47%), Gaps = 47/219 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + PA K +D+ R R SG++Y S +
Sbjct: 213 DRPNIRYSI-----------VDKQNAPAQLKAFIDD-------RHRGHSGVVYCLSRAKV 254
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED+ E L GL YHA L + + +IAFG+GIDKP+VRFV
Sbjct: 255 EDIAETLSKSGLTALPYHAGLPAEIRARNQDRFLNEDGVVIVATIAFGMGIDKPDVRFVA 314
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LAN 183
H L KS+E +YQE+GRAGRDG+ + + Y L D+ + M+ D+ +G +
Sbjct: 315 HLDLPKSIEAYYQETGRAGRDGKPSDAWMAYGLSDIVQQRRMI-DESSGSDAFKRVSMGK 373
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +V C + T CRR + YF E C G CD+C
Sbjct: 374 LDALVGLC-ESTGCRRTRLLGYFGETAQHESC-GNCDNC 410
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KS+E +YQ
Sbjct: 297 ATIAFGMGIDKPDVRFVAHLDLPKSIEAYYQ 327
>gi|340520691|gb|EGR50927.1| hypothetical protein TRIREDRAFT_105031 [Trichoderma reesei QM6a]
Length = 478
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 90/175 (51%), Gaps = 28/175 (16%)
Query: 73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------ 114
R N SGIIYT + ECE L LR+ G+ +HAKL +V
Sbjct: 267 RTENVSGIIYTMARDECESLSASLRDAGIGARPFHAKLPKDVKEDTLTNWINNEPGYDII 326
Query: 115 --SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSS 172
+ AFG+GIDK NVRFV+H L KS E +YQE GRAGRDG ++C LYY D+ ++S
Sbjct: 327 VATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQEVGRAGRDGNASYCFLYYSREDLERVSR 386
Query: 173 MV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
M+ + ++ L +L + YC + CR A I YF E EC CD
Sbjct: 387 MIKSDTKADSNYESRLRSLQALAYYCENINSCRHASICKYFGED-KIPECDFACD 440
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/31 (61%), Positives = 23/31 (74%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ AFG+GIDK NVRFV+H L KS E +YQ
Sbjct: 328 ATTAFGMGIDKDNVRFVVHWRLPKSFEGYYQ 358
>gi|300777720|ref|ZP_07087578.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
gi|300503230|gb|EFK34370.1| ATP-dependent helicase RecQ [Chryseobacterium gleum ATCC 35910]
Length = 734
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 69/198 (34%), Positives = 106/198 (53%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K K E+ +++ + +SGI+Y S ++ E+ + L+ G+ YHA
Sbjct: 212 YYEVRPKVNVDK----EIVKFINQH-KGKSGIVYCLSRRKVEEFAQLLQVNGINALPYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+ V +IAFG+GIDKP+VRFVIH+ KS+E++YQE+GRAG
Sbjct: 267 GLDQKVRVANQDKFLMEEVDVIVATIAFGMGIDKPDVRFVIHYDFPKSLESYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG HC+ +Y D+ KL V +++ GL L +V Y + + RR I Y
Sbjct: 327 RDGGEGHCLAFYDPKDIEKLEKFLAQKPVSEREIGLQLLNEVVGYA-ETSMSRRQYILYY 385
Query: 206 FDEAWSDTECRG--MCDH 221
F E++ + G MCD+
Sbjct: 386 FGESFDPVKGEGARMCDN 403
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ KS+E++YQ
Sbjct: 291 TIAFGMGIDKPDVRFVIHYDFPKSLESYYQ 320
>gi|374598547|ref|ZP_09671549.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|423323213|ref|ZP_17301055.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
gi|373910017|gb|EHQ41866.1| ATP-dependent DNA helicase, RecQ family [Myroides odoratus DSM
2801]
gi|404609764|gb|EKB09128.1| ATP-dependent DNA helicase RecQ [Myroides odoratimimus CIP 103059]
Length = 731
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 70/211 (33%), Positives = 112/211 (53%), Gaps = 29/211 (13%)
Query: 48 NFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
N Y IKP K+ ++ + +R + +SG+IY S K+ E++ L+ G+ YH
Sbjct: 210 NLY-YEIKPKT-KNIESDIIRFIKQR-KGKSGVIYCLSRKKVEEIANVLQVNGISAVPYH 266
Query: 108 AKLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRA 149
A L++ +IAFG+GIDKP+VR+VIHH + KS+E++YQE+GRA
Sbjct: 267 AGLDAKTRAKHQDMFLMEDVDVVVATIAFGMGIDKPDVRYVIHHDIPKSLESYYQETGRA 326
Query: 150 GRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIAS 204
GRDG C+ YY D+ KL + +Q+ G+A L +V+Y + + RR +
Sbjct: 327 GRDGGEGWCLAYYSYKDIEKLEKFMAGKPIAEQEIGIALLQEVVAYA-ETSMSRRKFLLH 385
Query: 205 YFDEAWSDTECRG--MCDHCRGGRRDAKRVD 233
YF E + + G M D+ R ++ ++ D
Sbjct: 386 YFGEEFDEVHGDGADMDDNVRNPKKKSEAKD 416
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E++YQ
Sbjct: 292 TIAFGMGIDKPDVRYVIHHDIPKSLESYYQ 321
>gi|397663426|ref|YP_006504964.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
gi|395126837|emb|CCD05020.1| ATP-dependent DNA helicase [Legionella pneumophila subsp.
pneumophila]
Length = 608
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 92/176 (52%), Gaps = 25/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L +L+ G + AYHA L +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGFKARAYHAGLPHAERREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 175 FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDA 229
D+Q + N N + + + CRR I+ YFDE S TEC+ CD C + A
Sbjct: 357 LDEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVCDNPPQTA 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|425441134|ref|ZP_18821420.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
gi|389718248|emb|CCH97777.1| ATP-dependent DNA helicase recQ [Microcystis aeruginosa PCC 9717]
Length = 703
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 80/242 (33%), Positives = 119/242 (49%), Gaps = 52/242 (21%)
Query: 8 IAYLNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELA 67
I L L TS + S ++PN+ + + SKS + YQ IK QK
Sbjct: 191 IQQLGLRDTSIHIASF------NRPNLYYEVQPKTSKSYQQLYQY-IK--GQKG------ 235
Query: 68 DLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE----SN---------- 113
+GI+Y S K + + E+L+ G+ YHA +E SN
Sbjct: 236 ----------AGIVYCISRKTVDKVAEQLQKDGINALPYHAGMEDRERSNNQTRFIRDDV 285
Query: 114 ----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFK 169
+IAFG+GI+KP+VRFVIH+ L +++E +YQESGRAGRDG+ A C L++ D K
Sbjct: 286 QIMVATIAFGMGINKPDVRFVIHYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARK 345
Query: 170 LSSMV------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ + +QQ L ++ Y + CRR+ + YF E+++ C G CD+CR
Sbjct: 346 IEYFINQKTEQNEQQKARQQLRQVLDYA-EGNECRRSSVLGYFGESFAGN-C-GNCDNCR 402
Query: 224 GG 225
G
Sbjct: 403 NG 404
>gi|260062261|ref|YP_003195341.1| ATP-dependent DNA helicase [Robiginitalea biformata HTCC2501]
gi|88783823|gb|EAR14994.1| putative ATP-dependent DNA helicase [Robiginitalea biformata
HTCC2501]
Length = 733
Score = 113 bits (283), Expect = 5e-23, Method: Composition-based stats.
Identities = 68/182 (37%), Positives = 96/182 (52%), Gaps = 26/182 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S K E+L + L+ G+ YHA ++ +IAF
Sbjct: 237 KSGIIYCLSRKRVEELAQVLQVNGVSAVPYHAGFDAKTRSRYQDMFLMEEVDVVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM----- 173
G+GIDKP+VR+VIHH + KS+E++YQE+GRAGRDG HC+ +Y DV KL
Sbjct: 297 GMGIDKPDVRYVIHHDIPKSIESYYQETGRAGRDGGEGHCLAFYSYKDVEKLEKFMAGKP 356
Query: 174 VFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG--MCDHCRGGRRDAKR 231
V +Q+ G A L IV+Y + + RR I YF E + + G M D+ R + +
Sbjct: 357 VAEQEIGNALLQEIVAYA-ETSVSRRKFILHYFGEEFDEVNGEGADMDDNVRNPKEKVEA 415
Query: 232 VD 233
D
Sbjct: 416 RD 417
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 20/30 (66%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRYVIHHDIPKSIESYYQ 322
>gi|54293843|ref|YP_126258.1| hypothetical protein lpl0899 [Legionella pneumophila str. Lens]
gi|53753675|emb|CAH15133.1| hypothetical protein lpl0899 [Legionella pneumophila str. Lens]
Length = 608
Score = 113 bits (283), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 92/176 (52%), Gaps = 25/176 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L +L+ G + AYHA L +IAF
Sbjct: 237 QSGIIYCGTRHTVEHLTAKLQELGFKARAYHAGLPHADRREVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
G+GIDKPNVRFV+HH L KS+E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVVHHDLPKSIEGYYQETGRAGRDGLPAKALLLYDAADSARLRSWIMNIP 356
Query: 175 FDQQTGL-ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDA 229
D+Q + N N + + + CRR I+ YFDE S TEC+ CD C + A
Sbjct: 357 LDEQRHIETNKLNHMLAFAEASHCRRQILLRYFDEP-SHTECKN-CDVCDNPPQTA 410
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/37 (62%), Positives = 28/37 (75%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV+HH L KS+E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVVHHDLPKSIEGYYQ 322
>gi|333029342|ref|ZP_08457403.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
gi|332739939|gb|EGJ70421.1| ATP-dependent DNA helicase RecQ [Bacteroides coprosuis DSM 18011]
Length = 727
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/209 (33%), Positives = 111/209 (53%), Gaps = 29/209 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+V+ A KD +D+ L + N+SGIIY S K+ E+L + L+ G+ +YHA
Sbjct: 211 YYEVK---AKTKD-VDKDVILFIKNNPNKSGIIYCLSRKKVEELTKILQANGINARSYHA 266
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
+++ +IAFG+GIDKP+VRFV+H+ + KS+E +YQE+GRAG
Sbjct: 267 GMDAATRNQNQDDFLMERVDVIVATIAFGMGIDKPDVRFVLHYDMPKSLEGYYQETGRAG 326
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG C+ +Y D+ KL V +Q+ G L + +Y + + CRR + Y
Sbjct: 327 RDGGEGKCVTFYSNKDLQKLEKFMQGKPVAEQEIGKQLLLDTAAYA-ESSLCRRKSLLHY 385
Query: 206 FDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
F E + C CD+C ++ + D+
Sbjct: 386 FGEDYEVENCE-HCDNCLNPKKQVEAQDL 413
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 29/39 (74%)
Query: 13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+ R +IAFG+GIDKP+VRFV+H+ + KS+E +YQ
Sbjct: 282 MERVDVIVATIAFGMGIDKPDVRFVLHYDMPKSLEGYYQ 320
>gi|256072282|ref|XP_002572465.1| blooms syndrome DNA helicase [Schistosoma mansoni]
Length = 901
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 62/136 (45%), Positives = 83/136 (61%), Gaps = 15/136 (11%)
Query: 114 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
+IAFG+GIDKP+VRFVIHH L KS+E +YQE+GR+GRDG + CILYY DV +L +
Sbjct: 445 ATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQEAGRSGRDGLPSTCILYYHWHDVVRLRKL 504
Query: 174 V-FDQQTGLAN---------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG----MC 219
+ D + +A LY +VSYC +Q CRR I S+F EA+ C +C
Sbjct: 505 IQGDGSSAVARGTHQFHEDALYRMVSYCENQIDCRRKQILSHFGEAFDSATCGTIVGCLC 564
Query: 220 DHCR-GGRRDAKRVDV 234
D+C+ RR + DV
Sbjct: 565 DNCQLSDRRRLEHRDV 580
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH L KS+E +YQ
Sbjct: 445 ATIAFGMGIDKPDVRFVIHHSLPKSIEGYYQ 475
>gi|440756898|ref|ZP_20936098.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
gi|440172927|gb|ELP52411.1| ATP-dependent DNA helicase RecQ [Microcystis aeruginosa TAIHU98]
Length = 701
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 110/220 (50%), Gaps = 46/220 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
++PN+ + + SKS + YQ IK QK SGI+Y S K
Sbjct: 207 NRPNLYYEVRAKTSKSYQQLYQY-IK--GQKG----------------SGIVYCISRKTV 247
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+ + E+L+ G+ YHA + +IAFG+GI+KP+VRFV+
Sbjct: 248 DQVAEQLQKDGINALPYHAGMNDQERSENQTRFIRDDVQIMVATIAFGMGINKPDVRFVV 307
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV------FDQQTGLANLY 185
H+ L +++E +YQESGRAGRDG+ A C L++ D K+ + +QQ L
Sbjct: 308 HYDLPRNLEGYYQESGRAGRDGEPAKCTLFFSFADARKIEYFINQKTEQNEQQKARQQLR 367
Query: 186 NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
++ Y + T CRR+ + YF E+++ C G CD+CR G
Sbjct: 368 QVLDYA-EGTECRRSSVLGYFGESFAGN-C-GNCDNCRNG 404
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/30 (56%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GI+KP+VRFV+H+ L +++E +YQ
Sbjct: 291 TIAFGMGINKPDVRFVVHYDLPRNLEGYYQ 320
>gi|346972907|gb|EGY16359.1| ATP-dependent DNA helicase recQ [Verticillium dahliae VdLs.17]
Length = 479
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 110/233 (47%), Gaps = 41/233 (17%)
Query: 24 AFGLGIDKPNVRFVIHHCLSKS---MENFYQV------RIKPAAQKDCLDELADLMSRRF 74
+F + +PN+ I + + + +F + R K +K L+ L + R
Sbjct: 213 SFVMSAHRPNLHLEIRYTQDREDGRLSDFIKWIRSVHDRRKAEPRKSELEALGE----RL 268
Query: 75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-------------------- 114
N SGIIYT S ECE L L G+ +HAKL +
Sbjct: 269 DNVSGIIYTISRDECESLANALSQEGIGARPFHAKLTKEMKESTLARWVNNEPGYDIIVA 328
Query: 115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
+ AFG+GIDK NVRFV+H L KS E +YQE+GRAGRDG ++C LYY D+ ++ +MV
Sbjct: 329 TTAFGMGIDKDNVRFVVHWRLPKSFEGYYQEAGRAGRDGNASYCFLYYSREDLQRVRNMV 388
Query: 175 -------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
+ L +L + YC + + CR A I SYF E + C CD
Sbjct: 389 SRGSRDGTNSDAQLRSLQRLALYCENTSMCRHAEICSYFGET-AIPPCDYACD 440
>gi|374261468|ref|ZP_09620050.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
gi|363538095|gb|EHL31507.1| hypothetical protein LDG_6438 [Legionella drancourtii LLAP12]
Length = 607
Score = 113 bits (283), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 25/169 (14%)
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIAF 118
QSGIIY + E L E+L++ G + AYHA L +IAF
Sbjct: 237 QSGIIYCGTRNSVESLAEKLQDMGFKARAYHAGLSHKERKEVQNLFRYDRIDIVVATIAF 296
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF--- 175
G+GIDKPNVRFV HH L K++E +YQE+GRAGRDG A +L Y D +L S +
Sbjct: 297 GMGIDKPNVRFVAHHDLPKNIEGYYQETGRAGRDGLPAQALLLYDAADSARLRSWIINTP 356
Query: 176 --DQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+Q+ N N + + + CRR I+ YFDE D+EC+ CD C
Sbjct: 357 LDEQRRVETNKLNHMLAFAEASHCRRQILLRYFDEP-CDSECK-YCDVC 403
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 15 RTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
R +IAFG+GIDKPNVRFV HH L K++E +YQ
Sbjct: 286 RIDIVVATIAFGMGIDKPNVRFVAHHDLPKNIEGYYQ 322
>gi|198276249|ref|ZP_03208780.1| hypothetical protein BACPLE_02441 [Bacteroides plebeius DSM 17135]
gi|198270691|gb|EDY94961.1| ATP-dependent DNA helicase RecQ [Bacteroides plebeius DSM 17135]
Length = 611
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/215 (36%), Positives = 108/215 (50%), Gaps = 40/215 (18%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN LS ++ YQ QK+ + + + RR RN+SGIIY S
Sbjct: 200 DRPN--------LSLEVKRGYQ-------QKEKIKAIVKFL-RRHRNESGIIYCMSRNGT 243
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E + + L G V+AYHA + + +IAFG+GIDK NVR+VI
Sbjct: 244 EKVAQLLEKEGFDVAAYHAGMSNEQREITQDDFINDRVQIICATIAFGMGIDKSNVRWVI 303
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD---QQTGLANLYNIV 188
H+ L KS+ENFYQE GRAGRDG + +L+Y D+ LS + Q L L +
Sbjct: 304 HYNLPKSIENFYQEIGRAGRDGLPSETLLFYSFGDIILLSRFAAESNQQGINLEKLNRMQ 363
Query: 189 SYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
Y + CRR I+ +YF E D +C G CD C+
Sbjct: 364 QYA-ESDICRRRILLNYFGETM-DHDC-GNCDVCK 395
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/31 (70%), Positives = 27/31 (87%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+ENFYQ
Sbjct: 286 ATIAFGMGIDKSNVRWVIHYNLPKSIENFYQ 316
>gi|218261590|ref|ZP_03476344.1| hypothetical protein PRABACTJOHN_02012 [Parabacteroides johnsonii
DSM 18315]
gi|423343392|ref|ZP_17321105.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
gi|218223945|gb|EEC96595.1| hypothetical protein PRABACTJOHN_02012 [Parabacteroides johnsonii
DSM 18315]
gi|409215467|gb|EKN08467.1| ATP-dependent DNA helicase RecQ [Parabacteroides johnsonii
CL02T12C29]
Length = 609
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 78/217 (35%), Positives = 109/217 (50%), Gaps = 44/217 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ I LSK K+ + + ++R R QSGIIY S
Sbjct: 199 DRPNLSLTIRRGLSK---------------KEKIAAIVHFINRHHR-QSGIIYCMSRNST 242
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
E L EEL +R AYHA L + ++AFG+GIDK NVR+VI
Sbjct: 243 ESLVEELSEYSIRAVAYHAGLSPDKREKAQDDFINDRVNVVCATVAFGMGIDKSNVRWVI 302
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-----LANLYN 186
H+ + S+EN+YQE GRAGRDG + +L+Y + D+ L F +++G L L
Sbjct: 303 HYNMPSSIENYYQEIGRAGRDGMKSDTLLFYSVGDILLLRR--FAEESGQKDVSLQKLNR 360
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
+ YC + CRR I+ SYF E +D +C G CD C+
Sbjct: 361 MRRYC-EADICRRRILLSYFGEE-TDKDC-GNCDVCK 394
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 26/30 (86%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDK NVR+VIH+ + S+EN+YQ
Sbjct: 286 TVAFGMGIDKSNVRWVIHYNMPSSIENYYQ 315
>gi|157144447|ref|YP_001451766.1| ATP-dependent DNA helicase RecQ [Citrobacter koseri ATCC BAA-895]
gi|157081652|gb|ABV11330.1| hypothetical protein CKO_00161 [Citrobacter koseri ATCC BAA-895]
Length = 609
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 209 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 249
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L++RG+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 250 EDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 309
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++ G L ++ N
Sbjct: 310 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPAGQLQDIERHKLN 369
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 370 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 322
>gi|383810866|ref|ZP_09966350.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
gi|383356505|gb|EID34005.1| ATP-dependent DNA helicase RecQ [Prevotella sp. oral taxon 306 str.
F0472]
Length = 727
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 106/197 (53%), Gaps = 27/197 (13%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+Y+VR K + D ++ + ++ +SGIIY S K+ E+L L+ ++ + YHA
Sbjct: 211 YYEVRAK-RSDDDTSKQIIKFI-KQHTGKSGIIYCLSRKKVEELAAILQANDIKAAPYHA 268
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L+S +IAFG+GIDKP+VRFVIH+ + KS+E +YQE+GRAG
Sbjct: 269 GLDSETRSKTQDDFLMEELDVIVATIAFGMGIDKPDVRFVIHYDIPKSLEGYYQETGRAG 328
Query: 151 RDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIASY 205
RDG+ CI++Y D+ KL V +Q G L +Y + + CRR ++ Y
Sbjct: 329 RDGEEGICIVFYSKNDLKKLEKFMEGKPVAEQDIGRQLLQETEAYA-ESSVCRRKMLLHY 387
Query: 206 FDEAWSDTECRGMCDHC 222
F E + C MCD+C
Sbjct: 388 FGEEYPKDNC-CMCDNC 403
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIH+ + KS+E +YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHYDIPKSLEGYYQ 322
>gi|347541663|ref|YP_004849089.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
gi|345644842|dbj|BAK78675.1| ATP-dependent DNA helicase RecQ [Pseudogulbenkiania sp. NH8B]
Length = 600
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 102/199 (51%), Gaps = 33/199 (16%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
FYQV K A+K +L + + + SGI+Y S K ED + L G+R YHA
Sbjct: 205 FYQVVEKHNAKK----QLLAFIQQDYPGASGIVYCLSRKRVEDTAQWLVENGIRALPYHA 260
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L V ++AFG+GIDKP+VRFV H L KS ENFYQESGRAG
Sbjct: 261 GLGHEVRDRHQREFLREDGVVMVATVAFGMGIDKPDVRFVAHIDLPKSPENFYQESGRAG 320
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV-------FDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
RDG A L Y L D+ +L+ M+ +Q L+ L ++++C + CRR I
Sbjct: 321 RDGLPAASWLCYGLNDMVQLTQMIEGSEMAALQKQVELSKLDAMLAFC-ETAACRRQHIL 379
Query: 204 SYFDEAWSDTECRGMCDHC 222
++F E C G CD+C
Sbjct: 380 AHFSE--QSAPC-GHCDNC 395
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GIDKP+VRFV H L KS ENFYQ
Sbjct: 285 TVAFGMGIDKPDVRFVAHIDLPKSPENFYQ 314
>gi|409076056|gb|EKM76430.1| hypothetical protein AGABI1DRAFT_78494 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 674
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 103/203 (50%), Gaps = 32/203 (15%)
Query: 50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR---NRGLRVSAY 106
Y++ KP+ + D + N +GI+Y + K+ E++ EL+ + ++ Y
Sbjct: 243 YRIVPKPSRGAAVTKAMVDYILEHHPNDTGIVYCLTKKDSENVARELQEFSDNKIKTGIY 302
Query: 107 H--------AKLESN----------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
H AKL + +IAFGLGIDK +VRFV+HH SKS+E FYQESGR
Sbjct: 303 HSERADSEKAKLHKDWRDGNIKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGFYQESGR 360
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYF-- 206
AGRDG+ A CILYYR D K+ +M + G ++ ++ + D CR+ A YF
Sbjct: 361 AGRDGKDADCILYYRPQDATKVLAMTTSDKLGQQKVHAVLEFAEDLIECRKIQFAKYFSH 420
Query: 207 -----DEAWS--DTECRGMCDHC 222
+W+ D + C HC
Sbjct: 421 SSSLSISSWTTEDQDALERCGHC 443
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/41 (60%), Positives = 30/41 (73%), Gaps = 5/41 (12%)
Query: 14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
WR +V +IAFGLGIDK +VRFV+HH SKS+E FYQ
Sbjct: 318 WRDGNIKVVCATIAFGLGIDKGDVRFVLHH--SKSLEGFYQ 356
>gi|386812206|ref|ZP_10099431.1| DNA helicase RecQ [planctomycete KSU-1]
gi|386404476|dbj|GAB62312.1| DNA helicase RecQ [planctomycete KSU-1]
Length = 714
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/198 (37%), Positives = 101/198 (51%), Gaps = 31/198 (15%)
Query: 49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
+YQ++ K L L SR+ SGIIY S K E L L+ G RV YHA
Sbjct: 202 YYQIKPKDNPYHQILHYLK---SRK--KDSGIIYCQSRKTVESLTTSLQAEGYRVLPYHA 256
Query: 109 KLESNV------------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
L + V +IAFG+GIDKP+VR+VIH+ L KS+E +YQE+GRAG
Sbjct: 257 GLPAEVRTENQERFIHDDVEIIVATIAFGMGIDKPDVRYVIHYDLPKSIEGYYQETGRAG 316
Query: 151 RDGQIAHCILYYRLPDVFKLSSMV---FDQQTGL---ANLYNIVSYCLDQTRCRRAIIAS 204
RDG + CIL + D FK+ + D+ L L ++ +YC + CRR ++
Sbjct: 317 RDGLKSDCILLFSYADKFKIEYFIHQKIDENEKLIAYKQLRHLTNYC-EGNICRRKLLLD 375
Query: 205 YFDEAWSDTECRGMCDHC 222
YF E + + C CD C
Sbjct: 376 YFGEKFDEPNCNN-CDVC 392
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VR+VIH+ L KS+E +YQ
Sbjct: 281 TIAFGMGIDKPDVRYVIHYDLPKSIEGYYQ 310
>gi|316936302|ref|YP_004111284.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
gi|315604016|gb|ADU46551.1| ATP-dependent DNA helicase RecQ [Rhodopseudomonas palustris DX-1]
Length = 617
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 104/219 (47%), Gaps = 47/219 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + PA K +D+ R R SG++Y S +
Sbjct: 213 DRPNIRYSI-----------VDKQNAPAQLKAFIDD-------RHRGHSGVVYCLSRAKV 254
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED+ E L GL YHA L + +IAFG+GIDKP+VRFV
Sbjct: 255 EDIAETLSKSGLTALPYHAGLPPDARARNQDRFLNEDGIVIVATIAFGMGIDKPDVRFVA 314
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG--------LAN 183
H L KS+E +YQE+GRAGRDG+ + + Y L D+ + M+ D+ +G +
Sbjct: 315 HLDLPKSIEAYYQETGRAGRDGKPSEAWMAYGLSDIVQQRRMI-DESSGSDAFKRVSMGK 373
Query: 184 LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
L +V C + T CRR + YF E C G CD+C
Sbjct: 374 LDALVGLC-ESTGCRRTRLLGYFGETAQHESC-GNCDNC 410
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/31 (64%), Positives = 25/31 (80%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFV H L KS+E +YQ
Sbjct: 297 ATIAFGMGIDKPDVRFVAHLDLPKSIEAYYQ 327
>gi|418292190|ref|ZP_12904140.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
gi|379063623|gb|EHY76366.1| ATP-dependent DNA helicase RecQ [Pseudomonas stutzeri ATCC 14405 =
CCUG 16156]
Length = 707
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 78/221 (35%), Positives = 110/221 (49%), Gaps = 47/221 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ FY++ K +K L LA+ R +GI+Y S K+
Sbjct: 201 DRPNI--------------FYRIVPKEQPRKQLLGFLAER-----RGDAGIVYCMSRKKV 241
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
+DL L +G YHA L S + +IAFG+GIDKPNVRFV
Sbjct: 242 DDLAAFLTEQGFPALPYHAGLPSELRAYHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVA 301
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANL 184
H L KS+E +YQE+GRAGRDG A + Y L DV L M+ + ++ L
Sbjct: 302 HLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVIFLKQMLNNSEGDERHKRVEQHKL 361
Query: 185 YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
+++ C ++TRCRR ++ +YFDE + C G CD+C G
Sbjct: 362 DAMLALC-EETRCRRQVLLAYFDEELPNP-C-GHCDNCVDG 399
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFV H L KS+E +YQ
Sbjct: 285 TIAFGMGIDKPNVRFVAHLDLPKSLEAYYQ 314
>gi|345301389|ref|YP_004830747.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
gi|345095326|gb|AEN66962.1| ATP-dependent DNA helicase RecQ [Enterobacter asburiae LF7a]
Length = 630
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/229 (34%), Positives = 120/229 (52%), Gaps = 49/229 (21%)
Query: 17 SFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRN 76
F QVS D+PN+R+++ ME F KP LD+L + + R
Sbjct: 222 PFIQVS-----SFDRPNIRYML-------MEKF-----KP------LDQLLRYVQEQ-RG 257
Query: 77 QSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV------------------SIAF 118
+SGIIY S + ED L+NRG +AYHA LE+++ ++AF
Sbjct: 258 KSGIIYCNSRAKVEDTAARLQNRGFSAAAYHAGLENHIRADVQEKFQRDDLQIVVATVAF 317
Query: 119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
G+GI+KPNVRFV+H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++
Sbjct: 318 GMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKP 377
Query: 179 TG-LANL----YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
G L ++ N + + CRR ++ +YF E ++ C G CD C
Sbjct: 378 QGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQES-C-GNCDIC 424
>gi|110807486|ref|YP_691006.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5 str. 8401]
gi|415859116|ref|ZP_11533441.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|417704375|ref|ZP_12353472.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|417725388|ref|ZP_12374173.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|417730594|ref|ZP_12379278.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|417735693|ref|ZP_12384331.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|417740471|ref|ZP_12389038.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|417745522|ref|ZP_12394040.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|420344000|ref|ZP_14845461.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
gi|424839868|ref|ZP_18264505.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|110617034|gb|ABF05701.1| ATP-dependent DNA helicase [Shigella flexneri 5 str. 8401]
gi|313647133|gb|EFS11588.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|332750946|gb|EGJ81351.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 4343-70]
gi|332751036|gb|EGJ81440.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-671]
gi|332752274|gb|EGJ82665.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2747-71]
gi|332764332|gb|EGJ94567.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2930-71]
gi|332998187|gb|EGK17790.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-218]
gi|333013511|gb|EGK32880.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-304]
gi|383468920|gb|EID63941.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 5a str. M90T]
gi|391262699|gb|EIQ21714.1| ATP-dependent DNA helicase RecQ [Shigella flexneri K-404]
Length = 609
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 209 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 249
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L++RG+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 250 EDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 309
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++ G L ++ N
Sbjct: 310 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLN 369
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 370 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 322
>gi|418259306|ref|ZP_12882257.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 6603-63]
gi|397894450|gb|EJL10892.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 6603-63]
Length = 609
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 209 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 249
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L++RG+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 250 EDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 309
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++ G L ++ N
Sbjct: 310 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLN 369
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 370 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 403
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 322
>gi|429214436|ref|ZP_19205599.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M1]
gi|428154722|gb|EKX01272.1| ATP-dependent DNA helicase RecQ [Pseudomonas sp. M1]
Length = 714
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 77/221 (34%), Positives = 110/221 (49%), Gaps = 47/221 (21%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+ FY++ K +K L LA+ R +GI+Y S K+
Sbjct: 201 DRPNI--------------FYRIVPKEQPRKQLLGFLAER-----RGDAGIVYCLSRKKV 241
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
E++ E L N+G YHA L + + +IAFG+GIDKPNVRFV
Sbjct: 242 EEVAEFLSNQGFPALPYHAGLSNELRAFHQKRFLNEEGLIMVATIAFGMGIDKPNVRFVA 301
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD-------QQTGLANL 184
H L KS+E +YQE+GRAGRDG A + Y L DV L M+ + ++ L
Sbjct: 302 HLDLPKSLEAYYQETGRAGRDGLPADAWMAYGLQDVLLLRQMMQNSEGDERHKRVERHKL 361
Query: 185 YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
+++ C ++ RCRR + +YFDE + C G CD+C G
Sbjct: 362 EAMLALC-EEPRCRRQALLAYFDEVMPNP-C-GHCDNCVDG 399
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 25/30 (83%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKPNVRFV H L KS+E +YQ
Sbjct: 285 TIAFGMGIDKPNVRFVAHLDLPKSLEAYYQ 314
>gi|345866766|ref|ZP_08818787.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
gi|344048686|gb|EGV44289.1| ATP-dependent DNA helicase RecQ [Bizionia argentinensis JUB59]
Length = 733
Score = 113 bits (282), Expect = 7e-23, Method: Composition-based stats.
Identities = 68/191 (35%), Positives = 105/191 (54%), Gaps = 33/191 (17%)
Query: 49 FYQVRIKPAAQKDCLDELADLMS--RRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAY 106
+Y+VR K AD++ +++ +SGI+Y S K E+L + L+ G++ Y
Sbjct: 213 YYEVRPKTKHVD------ADIIRFVKKYEGKSGIVYCLSRKRVEELAQTLQVNGIKAVPY 266
Query: 107 HAKLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
HA L++ +IAFG+GIDKP+VRFVIHH + KS+E++YQE+GR
Sbjct: 267 HAGLDAKSRARHQDMFLMEDVDVVVATIAFGMGIDKPDVRFVIHHDIPKSIESYYQETGR 326
Query: 149 AGRDGQIAHCILYYRLPDVFKLSSM-----VFDQQTGLANLYNIVSYCLDQTRCRRAIIA 203
AGRDG +C+ +Y D+ KL V +Q+ G A L +V++ + + RR I
Sbjct: 327 AGRDGGEGYCLAFYAYKDIEKLEKFMSGKPVAEQEIGHALLQEVVAFA-ETSISRRKFIL 385
Query: 204 SYFDEAWSDTE 214
YF E + D+E
Sbjct: 386 HYFGEEF-DSE 395
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 21/30 (70%), Positives = 28/30 (93%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDKP+VRFVIHH + KS+E++YQ
Sbjct: 293 TIAFGMGIDKPDVRFVIHHDIPKSIESYYQ 322
>gi|30064881|ref|NP_839052.1| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 2457T]
gi|56480445|ref|NP_709628.2| ATP-dependent DNA helicase RecQ [Shigella flexneri 2a str. 301]
gi|384545430|ref|YP_005729494.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
gi|30043141|gb|AAP18863.1| ATP-dependent DNA helicase [Shigella flexneri 2a str. 2457T]
gi|56383996|gb|AAN45335.2| ATP-dependent DNA helicase [Shigella flexneri 2a str. 301]
gi|281603217|gb|ADA76201.1| ATP-dependent DNA helicase [Shigella flexneri 2002017]
Length = 611
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 211 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L++RG+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 252 EDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++ G L ++ N
Sbjct: 312 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 372 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 405
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 295 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 324
>gi|300904077|ref|ZP_07121957.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|301303719|ref|ZP_07209840.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|415865367|ref|ZP_11538229.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
gi|300403957|gb|EFJ87495.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 84-1]
gi|300841019|gb|EFK68779.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 124-1]
gi|315254188|gb|EFU34156.1| ATP-dependent DNA helicase RecQ [Escherichia coli MS 85-1]
Length = 611
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 211 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L+++G+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 252 EDTAARLQSKGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A IL+Y D+ L + ++ G L ++ N
Sbjct: 312 HFDIPRNIESYYQETGRAGRDGLPAEAILFYDPADMAWLRRCLEEKPQGQLQDIERHKLN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 372 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 405
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 295 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 324
>gi|265751367|ref|ZP_06087430.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|345514773|ref|ZP_08794279.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|423228784|ref|ZP_17215190.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
gi|423247595|ref|ZP_17228644.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|229437610|gb|EEO47687.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei 5_1_36/D4]
gi|263238263|gb|EEZ23713.1| ATP-dependent DNA helicase RecQ [Bacteroides sp. 3_1_33FAA]
gi|392631925|gb|EIY25892.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T12C06]
gi|392635523|gb|EIY29422.1| ATP-dependent DNA helicase RecQ [Bacteroides dorei CL02T00C15]
Length = 605
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 71/186 (38%), Positives = 102/186 (54%), Gaps = 25/186 (13%)
Query: 59 QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV---- 114
QKD + + + + +N+ GIIY S + E + L +G+R + YHA L S++
Sbjct: 210 QKDKARTILEFIEKH-KNECGIIYCMSRSKTESVAAMLMKQGIRATVYHAGLSSDMRDKA 268
Query: 115 --------------SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
+IAFG+GIDK NVR+VIH+ L KS+E+FYQE GRAGRDG + +L
Sbjct: 269 QNDFINDRVQVVCATIAFGMGIDKSNVRWVIHYNLPKSIESFYQEIGRAGRDGMESDTLL 328
Query: 161 YYRLPDVFKLSSMVFD---QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRG 217
+Y L D+ LS + Q+ L L+ + Y + CRR I+ +YF E D +C G
Sbjct: 329 FYSLGDLVMLSKFATESSQQEINLEKLHRMQQYA-ESDICRRRILLNYFGETM-DHDC-G 385
Query: 218 MCDHCR 223
CD CR
Sbjct: 386 NCDVCR 391
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/30 (70%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ L KS+E+FYQ
Sbjct: 283 TIAFGMGIDKSNVRWVIHYNLPKSIESFYQ 312
>gi|77361487|ref|YP_341062.1| ATP-dependent DNA helicase [Pseudoalteromonas haloplanktis TAC125]
gi|76876398|emb|CAI87620.1| ATP-dependent DNA helicase [Pseudoalteromonas haloplanktis TAC125]
Length = 607
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 112/216 (51%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+ I + KP Q L L + ++QSGIIY TS K
Sbjct: 211 DRPNIRYTIEE------------KFKPMVQ--LLRYL-----KEQKSQSGIIYCTSRKRV 251
Query: 90 EDLREELRNRGLRVSAYHAKLESN------------------VSIAFGLGIDKPNVRFVI 131
+D+ E+L + GL +AYHA + + ++AFG+GI+KPNVRFV+
Sbjct: 252 DDIAEKLADAGLNAAAYHAGMSNEQRQFVQTGFARDDIQIVVATVAFGMGINKPNVRFVL 311
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM---VFDQQTGLA--NLYN 186
H+ + KS+E++YQE+GRAGRDG A I+Y+ D+ ++ + D+Q +N
Sbjct: 312 HYDIPKSIESYYQETGRAGRDGLAAEAIMYFDPADIGRVRRFFEDIDDEQRRRVEEQRFN 371
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
++ + CRR I+ +YF E + C G CD C
Sbjct: 372 AMASFAEAQTCRRQILLNYFSE-YQREPC-GNCDIC 405
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 28/31 (90%)
Query: 21 VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H+ + KS+E++YQ
Sbjct: 294 ATVAFGMGINKPNVRFVLHYDIPKSIESYYQ 324
>gi|432399769|ref|ZP_19642542.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|432408892|ref|ZP_19651593.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|432725287|ref|ZP_19960200.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|432729896|ref|ZP_19964768.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|432743585|ref|ZP_19978298.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|432988316|ref|ZP_20176995.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|433113097|ref|ZP_20298944.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
gi|430912931|gb|ELC34103.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE25]
gi|430925933|gb|ELC46529.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE28]
gi|431262506|gb|ELF54496.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE17]
gi|431270666|gb|ELF61828.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE18]
gi|431280876|gb|ELF71785.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE23]
gi|431502029|gb|ELH80922.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE217]
gi|431624586|gb|ELI93202.1| ATP-dependent DNA helicase recQ [Escherichia coli KTE150]
Length = 604
Score = 113 bits (282), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 116/216 (53%), Gaps = 44/216 (20%)
Query: 30 DKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKEC 89
D+PN+R+++ ME F KP LD+L + + R +SGIIY S +
Sbjct: 204 DRPNIRYML-------MEKF-----KP------LDQLMRYVQEQ-RGKSGIIYCNSRAKV 244
Query: 90 EDLREELRNRGLRVSAYHAKLESNV------------------SIAFGLGIDKPNVRFVI 131
ED L++RG+ +AYHA LE+NV ++AFG+GI+KPNVRFV+
Sbjct: 245 EDTAARLQSRGISAAAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGINKPNVRFVV 304
Query: 132 HHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTG-LANL----YN 186
H + +++E++YQE+GRAGRDG A +L+Y D+ L + ++ G L ++ N
Sbjct: 305 HFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPQGQLQDIERHKLN 364
Query: 187 IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
+ + CRR ++ +YF E + C G CD C
Sbjct: 365 AMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 398
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
++AFG+GI+KPNVRFV+H + +++E++YQ
Sbjct: 288 TVAFGMGINKPNVRFVVHFDIPRNIESYYQ 317
>gi|294673710|ref|YP_003574326.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
gi|294473219|gb|ADE82608.1| ATP-dependent DNA helicase RecQ [Prevotella ruminicola 23]
Length = 607
Score = 113 bits (282), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 69/170 (40%), Positives = 96/170 (56%), Gaps = 28/170 (16%)
Query: 76 NQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN------------------VSIA 117
N +GIIY S K E + +LR +G+ +AYHA L S +IA
Sbjct: 228 NDAGIIYCLSRKTTEKVAADLRKKGINAAAYHAGLSSLERSQTQEQFKNDQLLVVCATIA 287
Query: 118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
FG+GIDK NVR+VIH+ + KS+E+FYQE GRAGRDG A +L+Y L D+ +L+ F +
Sbjct: 288 FGMGIDKSNVRWVIHYNMPKSIESFYQEIGRAGRDGAPADTVLFYSLADIIQLTE--FAR 345
Query: 178 QTG-----LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
Q+G + L + Y + CRR I+ +YF E +D +C G CD C
Sbjct: 346 QSGQQDVNMDKLKRMQEYA-ESNVCRRRILLNYFSEQ-TDHDC-GNCDVC 392
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/30 (66%), Positives = 27/30 (90%)
Query: 22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
+IAFG+GIDK NVR+VIH+ + KS+E+FYQ
Sbjct: 285 TIAFGMGIDKSNVRWVIHYNMPKSIESFYQ 314
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.327 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,449,841,366
Number of Sequences: 23463169
Number of extensions: 129711720
Number of successful extensions: 423423
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6471
Number of HSP's successfully gapped in prelim test: 1455
Number of HSP's that attempted gapping in prelim test: 400545
Number of HSP's gapped (non-prelim): 15838
length of query: 234
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 96
effective length of database: 9,121,278,045
effective search space: 875642692320
effective search space used: 875642692320
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 74 (33.1 bits)