AmiGO: BLAST Results


BLAST match view associations BLAST with K02F3.12 K02F3.12 K02F3.12	gene from Caenorhabditis elegans	1.1e-47
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Sus scrofa	1.2e-45
BLAST match view associations BLAST with RECQL RECQL RECQL ATP-dependent DNA helicase Q1	protein from Homo sapiens	2.2e-45
BLAST match view associations BLAST with Recql Recql Recql RecQ protein-like (DNA helicase Q1-like)	gene from Rattus norvegicus	2.9e-45
BLAST match view associations BLAST with recql recql recql RecQ protein-like (DNA helicase Q1-like)	gene_product from Danio rerio	1.1e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Bos taurus	1.1e-44
BLAST match view associations BLAST with Recql Recql Recql RecQ protein-like	protein from Mus musculus	1.2e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Canis lupus familiaris	3.3e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Gallus gallus	5.9e-43
BLAST match view associations BLAST with SGS1 SGS1 SGS1	gene_product from Candida albicans	3.2e-31
BLAST match view associations BLAST with SGS1 SGS1 SGS1 Putative uncharacterized protein SGS1	protein from Candida albicans SC5314	3.2e-31
BLAST match view associations BLAST with RECQL2 RECQL2 RECQL2 RECQ helicase L2	protein from Arabidopsis thaliana	3.2e-31
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome helicase ortholog	protein from Drosophila melanogaster	1.2e-30
BLAST match view associations BLAST with DDB_G0272384 DDB_G0272384 DDB_G0272384 Bloom syndrome-like protein	gene from Dictyostelium discoideum	2.3e-30
BLAST match view associations BLAST with SGS1 SGS1 SGS1 Nucleolar DNA helicase of the RecQ family	gene from Saccharomyces cerevisiae	7.9e-30
BLAST match view associations BLAST with blm blm blm Bloom syndrome protein homolog	protein from Xenopus laevis	1.5e-28
BLAST match view associations BLAST with blm blm blm Bloom syndrome protein	gene from Dictyostelium discoideum	2.3e-27
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein homolog	protein from Gallus gallus	5.8e-27
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein homolog	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with RECQI1 RECQI1 RECQI1 RECQ helicase l1	protein from Arabidopsis thaliana	7.7e-26
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome, RecQ helicase-like	protein from Mus musculus	4.2e-24
BLAST match view associations BLAST with blm blm blm Bloom syndrome	gene_product from Danio rerio	5.1e-24
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Sus scrofa	1.2e-23
BLAST match view associations BLAST with BA_2818 BA_2818 BA_2818 ATP-dependent DNA helicase RecQ	protein from Bacillus anthracis str. Ames	1.4e-23
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein	protein from Homo sapiens	2.6e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Canis lupus familiaris	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein	protein from Homo sapiens	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Canis lupus familiaris	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Bos taurus	6.3e-23
BLAST match view associations BLAST with recQ recQ recQ	protein from Escherichia coli K-12	7.0e-23
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Canis lupus familiaris	8.6e-23
BLAST match view associations BLAST with VC_0196 VC_0196 VC_0196 ATP-dependent DNA helicase RecQ	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.6e-22
BLAST match view associations BLAST with VC_0196 VC_0196 VC_0196 ATP-dependent DNA helicase RecQ	protein from Vibrio cholerae O1 biovar El Tor	2.6e-22
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	2.7e-22
BLAST match view associations BLAST with him-6 him-6 him-6	gene from Caenorhabditis elegans	4.3e-22
BLAST match view associations BLAST with RecQl3 RecQl3 RecQl3 AT4G35740	protein from Arabidopsis thaliana	2.0e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 RecQ protein-like 5	protein from Homo sapiens	3.0e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	3.3e-21
BLAST match view associations BLAST with RECQ4A RECQ4A RECQ4A	protein from Arabidopsis thaliana	3.3e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Bos taurus	1.8e-20
BLAST match view associations BLAST with CBU_0472 CBU_0472 CBU_0472 ATP-dependent DNA helicase RecQ	protein from Coxiella burnetii RSA 493	2.2e-20
BLAST match view associations BLAST with SO_4241 SO_4241 SO_4241 ATP-dependent DNA helicase RecQ	protein from Shewanella oneidensis MR-1	3.5e-20
BLAST match view associations BLAST with RECQSIM RECQSIM RECQSIM RECQ helicase SIM	protein from Arabidopsis thaliana	5.8e-20
BLAST match view associations BLAST with rcq-5 rcq-5 rcq-5	gene from Caenorhabditis elegans	2.4e-19
BLAST match view associations BLAST with SO_2380 SO_2380 SO_2380 ATP-dependent DNA helicase RecQ family	protein from Shewanella oneidensis MR-1	5.7e-18
BLAST match view associations BLAST with SO_2380 SO_2380 SO_2380 RecQ domain protein	protein from Shewanella oneidensis MR-1	5.7e-18
BLAST match view associations BLAST with recQ recQ recQ Probable ATP-dependent DNA helicase RecQ	protein from Bacillus subtilis subsp. subtilis str. 168	1.5e-17
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome, RecQ helicase-like	gene from Rattus norvegicus	1.7e-17
BLAST match view associations BLAST with PF14_0278 PF14_0278 PF14_0278 ATP-dependent DNA helicase, putative	gene from Plasmodium falciparum	6.6e-17
BLAST match view associations BLAST with PF14_0278 PF14_0278 PF14_0278 ATP-dependent DNA helicase, putative	protein from Plasmodium falciparum 3D7	6.6e-17
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Sus scrofa	1.0e-16
BLAST match view associations BLAST with GSU_0898 GSU_0898 GSU_0898 ATP-dependent DNA helicase RecQ	protein from Geobacter sulfurreducens PCA	1.9e-16
BLAST match view associations BLAST with RecQ5 RecQ5 RecQ5 homolog of RecQ	protein from Drosophila melanogaster	4.1e-16
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	1.3e-15
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Gallus gallus	1.5e-15
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	2.1e-15
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	2.3e-15
BLAST match view associations BLAST with Recql5 Recql5 Recql5 RecQ protein-like 5	gene from Rattus norvegicus	2.9e-15
BLAST match view associations BLAST with SPO_0107 SPO_0107 SPO_0107 ATP-dependent DNA helicase RecQ	protein from Ruegeria pomeroyi DSS-3	5.3e-15
BLAST match view associations BLAST with wrn-1 wrn-1 wrn-1	gene from Caenorhabditis elegans	3.8e-14
BLAST match view associations BLAST with CPS_4237 CPS_4237 CPS_4237 RecQ domain protein	protein from Colwellia psychrerythraea 34H	8.5e-14
BLAST match view associations BLAST with CPS_4237 CPS_4237 CPS_4237 RecQ domain protein	protein from Colwellia psychrerythraea 34H	8.5e-14
BLAST match view associations BLAST with WRN WRN WRN Werner syndrome ATP-dependent helicase	protein from Homo sapiens	8.6e-14
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome	gene_product from Danio rerio	1.8e-13
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with Wrn Wrn Wrn Werner syndrome homolog (human)	protein from Mus musculus	5.2e-12
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Gallus gallus	5.8e-12
BLAST match view associations BLAST with F1RX70 F1RX70 F1RX70 Uncharacterized protein	protein from Sus scrofa	1.6e-11
BLAST match view associations BLAST with I3LC91 I3LC91 I3LC91 Uncharacterized protein	protein from Sus scrofa	1.9e-11
BLAST match view associations BLAST with Wrn Wrn Wrn Werner syndrome, RecQ helicase-like	gene from Rattus norvegicus	1.1e-10
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Bos taurus	1.3e-10
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome ATP-dependent helicase homolog	protein from Xenopus laevis	2.3e-10
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome protein	gene from Dictyostelium discoideum	5.9e-10
BLAST match view associations BLAST with CPS_2945 CPS_2945 CPS_2945 Putative DEAD/DEAH box helicase	protein from Colwellia psychrerythraea 34H	1.1e-07
BLAST match view associations BLAST with CPS_2945 CPS_2945 CPS_2945 putative DEAD/DEAH box helicase	protein from Colwellia psychrerythraea 34H	1.1e-07
BLAST match view associations BLAST with AT1G27880 AT1G27880 AT1G27880	protein from Arabidopsis thaliana	1.9e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.8e-07
BLAST match view associations BLAST with Recql4 Recql4 Recql4 RecQ protein-like 4	gene from Rattus norvegicus	3.6e-07
BLAST match view associations BLAST with RecQ4 RecQ4 RecQ4	protein from Drosophila melanogaster	3.9e-07
BLAST match view associations BLAST with H9KZS5 H9KZS5 H9KZS5 Uncharacterized protein	protein from Gallus gallus	6.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 ATP-dependent DNA helicase Q4	protein from Homo sapiens	8.3e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 RECQL4 protein	protein from Bos taurus	9.6e-07
BLAST match view associations BLAST with BA_1505 BA_1505 BA_1505 ATP-dependent DNA helicase RecQ	protein from Bacillus anthracis str. Ames	1.2e-06
BLAST match view associations BLAST with RTS RTS RTS RECQL4-helicase-like protein	protein from Xenopus laevis	1.4e-06
BLAST match view associations BLAST with recql4 recql4 recql4 RecQ4 protein	protein from Xenopus laevis	1.4e-06
BLAST match view associations BLAST with Recql4 Recql4 Recql4 RecQ protein-like 4	protein from Mus musculus	2.5e-06
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	0.00091
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy4494
        (234 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

WB|WBGene00019334 - symbol:K02F3.12 species:6239 "Caenorh...   394  1.1e-47   2
UNIPROTKB|F1SR01 - symbol:RECQL "Uncharacterized protein"...   376  1.2e-45   2
UNIPROTKB|P46063 - symbol:RECQL "ATP-dependent DNA helica...   366  2.2e-45   2
RGD|1311071 - symbol:Recql "RecQ protein-like (DNA helica...   369  2.9e-45   2
UNIPROTKB|Q6AYJ1 - symbol:Recql "ATP-dependent DNA helica...   369  2.9e-45   2
ZFIN|ZDB-GENE-050809-134 - symbol:recql "RecQ protein-lik...   364  1.1e-44   2
UNIPROTKB|A0JN36 - symbol:RECQL "Uncharacterized protein"...   370  1.1e-44   2
MGI|MGI:103021 - symbol:Recql "RecQ protein-like" species...   368  1.2e-44   2
UNIPROTKB|F1PNP1 - symbol:RECQL "Uncharacterized protein"...   362  3.3e-44   2
UNIPROTKB|F1NPI7 - symbol:RECQL "Uncharacterized protein"...   455  5.9e-43   1
ASPGD|ASPL0000045206 - symbol:musN species:162425 "Emeric...   279  3.0e-31   2
CGD|CAL0004296 - symbol:SGS1 species:5476 "Candida albica...   269  3.2e-31   2
UNIPROTKB|Q5A5R4 - symbol:SGS1 "Putative uncharacterized ...   269  3.2e-31   2
TAIR|locus:2197555 - symbol:RECQL2 "RECQ helicase L2" spe...   351  3.2e-31   1
FB|FBgn0002906 - symbol:Blm "Bloom syndrome helicase orth...   279  1.2e-30   3
DICTYBASE|DDB_G0272384 - symbol:DDB_G0272384 "Bloom syndr...   182  2.3e-30   3
SGD|S000004802 - symbol:SGS1 "Nucleolar DNA helicase of t...   257  7.9e-30   2
UNIPROTKB|Q9DEY9 - symbol:blm "Bloom syndrome protein hom...   270  1.5e-28   2
DICTYBASE|DDB_G0292130 - symbol:blm "Bloom syndrome prote...   257  2.3e-27   2
UNIPROTKB|F1ND40 - symbol:BLM "Bloom syndrome protein hom...   270  3.4e-27   2
UNIPROTKB|F1P3V1 - symbol:BLM "Bloom syndrome protein hom...   270  5.8e-27   2
UNIPROTKB|Q9I920 - symbol:BLM "Bloom syndrome protein hom...   265  1.2e-26   2
TAIR|locus:2074429 - symbol:RECQI1 "RECQ helicase l1" spe...   233  7.7e-26   2
MGI|MGI:1328362 - symbol:Blm "Bloom syndrome, RecQ helica...   290  4.2e-24   1
ZFIN|ZDB-GENE-070702-5 - symbol:blm "Bloom syndrome" spec...   282  5.1e-24   2
UNIPROTKB|F1RMJ2 - symbol:BLM "Uncharacterized protein" s...   261  1.2e-23   2
TIGR_CMR|BA_2818 - symbol:BA_2818 "ATP-dependent DNA heli...   224  1.4e-23   2
UNIPROTKB|H0YNU5 - symbol:BLM "Bloom syndrome protein" sp...   282  2.6e-23   1
UNIPROTKB|E2RS76 - symbol:BLM "Uncharacterized protein" s...   282  3.0e-23   1
UNIPROTKB|P54132 - symbol:BLM "Bloom syndrome protein" sp...   282  3.0e-23   1
UNIPROTKB|J9PB86 - symbol:BLM "Uncharacterized protein" s...   282  3.0e-23   1
UNIPROTKB|E1BQ04 - symbol:BLM "Uncharacterized protein" s...   279  6.3e-23   1
UNIPROTKB|P15043 - symbol:recQ species:83333 "Escherichia...   198  7.0e-23   2
UNIPROTKB|F1PAG8 - symbol:RECQL5 "Uncharacterized protein...   216  8.6e-23   2
UNIPROTKB|Q9KVF0 - symbol:VC_0196 "ATP-dependent DNA heli...   200  2.6e-22   3
TIGR_CMR|VC_0196 - symbol:VC_0196 "ATP-dependent DNA heli...   200  2.6e-22   3
UNIPROTKB|J3KTQ2 - symbol:RECQL5 "ATP-dependent DNA helic...   207  2.7e-22   2
WB|WBGene00001865 - symbol:him-6 species:6239 "Caenorhabd...   269  4.3e-22   1
TAIR|locus:2127998 - symbol:RecQl3 "AT4G35740" species:37...   203  2.0e-21   2
UNIPROTKB|Q6P4G0 - symbol:RECQL5 "ATP-dependent DNA helic...   207  3.0e-21   2
UNIPROTKB|O94762 - symbol:RECQL5 "ATP-dependent DNA helic...   207  3.3e-21   2
TAIR|locus:2197394 - symbol:RECQ4A species:3702 "Arabidop...   204  3.3e-21   2
POMBASE|SPAC2G11.12 - symbol:rqh1 "RecQ type DNA helicase...   260  6.1e-21   1
UNIPROTKB|E1BKM5 - symbol:RECQL5 "Uncharacterized protein...   201  1.8e-20   2
TIGR_CMR|CBU_0472 - symbol:CBU_0472 "ATP-dependent DNA he...   223  2.2e-20   2
TIGR_CMR|SO_4241 - symbol:SO_4241 "ATP-dependent DNA heli...   201  3.5e-20   2
TAIR|locus:2180255 - symbol:RECQSIM "RECQ helicase SIM" s...   223  5.8e-20   2
WB|WBGene00004322 - symbol:rcq-5 species:6239 "Caenorhabd...   162  2.4e-19   3
UNIPROTKB|Q8EEK1 - symbol:SO_2380 "ATP-dependent DNA heli...   196  5.7e-18   2
TIGR_CMR|SO_2380 - symbol:SO_2380 "RecQ domain protein" s...   196  5.7e-18   2
UNIPROTKB|O34748 - symbol:recQ "Probable ATP-dependent DN...   207  1.5e-17   2
RGD|1308810 - symbol:Blm "Bloom syndrome, RecQ helicase-l...   226  1.7e-17   1
GENEDB_PFALCIPARUM|PF14_0278 - symbol:PF14_0278 "ATP-depe...   174  6.6e-17   2
UNIPROTKB|Q8ILG5 - symbol:PF14_0278 "ATP-dependent DNA he...   174  6.6e-17   2
UNIPROTKB|I3LFW3 - symbol:RECQL5 "Uncharacterized protein...   169  1.0e-16   2
TIGR_CMR|GSU_0898 - symbol:GSU_0898 "ATP-dependent DNA he...   213  1.9e-16   1
UNIPROTKB|F1NT69 - symbol:F1NT69 "Uncharacterized protein...   208  3.4e-16   1
FB|FBgn0027375 - symbol:RecQ5 "homolog of RecQ" species:7...   193  4.1e-16   2
UNIPROTKB|F1PZR2 - symbol:WRN "Uncharacterized protein" s...   172  1.3e-15   2
UNIPROTKB|F1NWK5 - symbol:F1NWK5 "Uncharacterized protein...   208  1.5e-15   1
UNIPROTKB|F1PZR3 - symbol:WRN "Uncharacterized protein" s...   172  2.1e-15   2
UNIPROTKB|F1PUF8 - symbol:WRN "Uncharacterized protein" s...   172  2.3e-15   2
RGD|1310823 - symbol:Recql5 "RecQ protein-like 5" species...   205  2.9e-15   1
TIGR_CMR|SPO_0107 - symbol:SPO_0107 "ATP-dependent DNA he...   169  5.3e-15   2
WB|WBGene00006944 - symbol:wrn-1 species:6239 "Caenorhabd...   171  3.8e-14   2
UNIPROTKB|Q47WD5 - symbol:CPS_4237 "RecQ domain protein" ...   164  8.5e-14   2
TIGR_CMR|CPS_4237 - symbol:CPS_4237 "RecQ domain protein"...   164  8.5e-14   2
UNIPROTKB|Q14191 - symbol:WRN "Werner syndrome ATP-depend...   172  8.6e-14   2
ZFIN|ZDB-GENE-070702-2 - symbol:wrn "Werner syndrome" spe...   172  1.8e-13   2
UNIPROTKB|J3KRM6 - symbol:RECQL5 "ATP-dependent DNA helic...   163  3.9e-12   1
MGI|MGI:109635 - symbol:Wrn "Werner syndrome homolog (hum...   169  5.2e-12   2
UNIPROTKB|F1NAR0 - symbol:F1NAR0 "Uncharacterized protein...   166  5.8e-12   2
UNIPROTKB|F1RX70 - symbol:WRN "Uncharacterized protein" s...   166  1.6e-11   2
UNIPROTKB|I3LC91 - symbol:WRN "Uncharacterized protein" s...   166  1.9e-11   2
ASPGD|ASPL0000072255 - symbol:recQ species:162425 "Emeric...   153  7.2e-11   2
RGD|1564788 - symbol:Wrn "Werner syndrome, RecQ helicase-...   164  1.1e-10   2
UNIPROTKB|E1BEE6 - symbol:WRN "Uncharacterized protein" s...   159  1.3e-10   2
UNIPROTKB|O93530 - symbol:wrn "Werner syndrome ATP-depend...   166  2.3e-10   2
DICTYBASE|DDB_G0268512 - symbol:wrn "Werner syndrome prot...   160  5.9e-10   2
UNIPROTKB|D4A4N2 - symbol:Recql "ATP-dependent DNA helica...   142  1.7e-08   1
UNIPROTKB|Q47ZX4 - symbol:CPS_2945 "Putative DEAD/DEAH bo...   140  1.1e-07   2
TIGR_CMR|CPS_2945 - symbol:CPS_2945 "putative DEAD/DEAH b...   140  1.1e-07   2
TAIR|locus:2029799 - symbol:AT1G27880 species:3702 "Arabi...   146  1.9e-07   1
UNIPROTKB|F1RSP7 - symbol:RECQL4 "Uncharacterized protein...   146  2.7e-07   1
UNIPROTKB|K7GSZ9 - symbol:RECQL4 "Uncharacterized protein...   146  2.7e-07   1
UNIPROTKB|F1RV44 - symbol:RECQL4 "Uncharacterized protein...   146  2.8e-07   1
RGD|1307732 - symbol:Recql4 "RecQ protein-like 4" species...   145  3.6e-07   1
FB|FBgn0040290 - symbol:RecQ4 "RecQ4" species:7227 "Droso...   143  3.9e-07   2
UNIPROTKB|H9KZS5 - symbol:H9KZS5 "Uncharacterized protein...   133  6.7e-07   1
UNIPROTKB|O94761 - symbol:RECQL4 "ATP-dependent DNA helic...   142  8.3e-07   1
UNIPROTKB|A5D786 - symbol:RECQL4 "RECQL4 protein" species...   145  9.6e-07   2
TIGR_CMR|BA_1505 - symbol:BA_1505 "ATP-dependent DNA heli...   109  1.2e-06   3
UNIPROTKB|Q4JNX8 - symbol:RTS "RECQL4-helicase-like prote...   141  1.4e-06   1
UNIPROTKB|Q33DM4 - symbol:recql4 "RecQ4 protein" species:...   141  1.4e-06   1
MGI|MGI:1931028 - symbol:Recql4 "RecQ protein-like 4" spe...   138  2.5e-06   1
POMBASE|SPBCPT2R1.08c - symbol:tlh2 "RecQ type DNA helica...   137  5.6e-06   1
POMBASE|SPAC212.11 - symbol:tlh1 "RecQ type DNA helicase"...   137  6.2e-06   1
ASPGD|ASPL0000073665 - symbol:AN5092 species:162425 "Emer...   133  1.3e-05   1
UNIPROTKB|F1LX16 - symbol:F1LX16 "Uncharacterized protein...   114  0.00073   1
RGD|1307306 - symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box he...   114  0.00091   1


>WB|WBGene00019334 [details] [associations]
            symbol:K02F3.12 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            EMBL:FO080195 HSSP:P15043 KO:K10899 OMA:ESSQTCH
            RefSeq:NP_001022656.1 RefSeq:NP_001022657.1
            ProteinModelPortal:Q9TXJ8 SMR:Q9TXJ8 EnsemblMetazoa:K02F3.12a
            GeneID:175246 KEGG:cel:CELE_K02F3.12 UCSC:K02F3.12a CTD:175246
            WormBase:K02F3.12a HOGENOM:HOG000044388 InParanoid:Q9TXJ8
            NextBio:887386 Uniprot:Q9TXJ8
        Length = 631

 Score = 394 (143.8 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
 Identities = 70/111 (63%), Positives = 86/111 (77%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKPNVRFVIHH L KS+EN+YQESGRAGRDGQ A CILYYRL D+FK SSMV
Sbjct:   389 TVAFGMGIDKPNVRFVIHHSLPKSIENYYQESGRAGRDGQPATCILYYRLADIFKQSSMV 448

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
               ++TG+ NLYN+V Y  D + CRR  +A +F+EAW  + C+  CD C  G
Sbjct:   449 QQERTGIQNLYNMVRYAADSSTCRRVKLAEHFEEAWEPSWCQKQCDTCENG 499

 Score = 134 (52.2 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 26/41 (63%), Positives = 32/41 (78%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W +   QV   ++AFG+GIDKPNVRFVIHH L KS+EN+YQ
Sbjct:   378 WISGKIQVIVATVAFGMGIDKPNVRFVIHHSLPKSIENYYQ 418

 Score = 130 (50.8 bits), Expect = 1.1e-47, Sum P(2) = 1.1e-47
 Identities = 23/62 (37%), Positives = 39/62 (62%)

Query:    50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
             Y+V  KP ++ +C +E+A  + R F  Q+GIIY  S  +CE + + L++ G++   YHA 
Sbjct:   306 YKVVQKPGSEDECTEEIAKTIKRDFAGQTGIIYCLSRNDCEKVAKALKSHGIKAKHYHAY 365

Query:   110 LE 111
             +E
Sbjct:   366 ME 367


>UNIPROTKB|F1SR01 [details] [associations]
            symbol:RECQL "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0000733 "DNA strand
            renaturation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF09382 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 GO:GO:0015630 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0000733
            OMA:ESSQTCH EMBL:CU633485 EMBL:CU457490 Ensembl:ENSSSCT00000000624
            Uniprot:F1SR01
        Length = 649

 Score = 376 (137.4 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
 Identities = 66/108 (61%), Positives = 83/108 (76%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDTKADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRR +IA +FDE WS  EC  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVWSPEECNKMCDNC 478

 Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400

 Score = 132 (51.5 bits), Expect = 1.2e-45, Sum P(2) = 1.2e-45
 Identities = 24/63 (38%), Positives = 41/63 (65%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP+  +D ++++  L++ R++ QSGIIY  S K+ E +   L+  G+   AYHA
Sbjct:   287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIHAGAYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349


>UNIPROTKB|P46063 [details] [associations]
            symbol:RECQL "ATP-dependent DNA helicase Q1" species:9606
            "Homo sapiens" [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA
            helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005515
            "protein binding" evidence=IPI] [GO:0000733 "DNA strand
            renaturation" evidence=IDA] [GO:0003678 "DNA helicase activity"
            evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0015630 "microtubule cytoskeleton"
            evidence=IDA] [GO:0032508 "DNA duplex unwinding" evidence=IDA;TAS]
            InterPro:IPR001650 InterPro:IPR004589 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF09382
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0015630 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310 GO:GO:0004003
            EMBL:CH471094 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 eggNOG:COG0514 TIGRFAMs:TIGR00614 GO:GO:0000733
            EMBL:AC006559 KO:K10899 OMA:ESSQTCH HOGENOM:HOG000044388
            EMBL:L36140 EMBL:D37984 EMBL:BT007119 EMBL:AK291627 EMBL:BC001052
            IPI:IPI00178431 PIR:A58836 RefSeq:NP_002898.2 RefSeq:NP_116559.1
            UniGene:Hs.235069 PDB:2V1X PDB:2WWY PDBsum:2V1X PDBsum:2WWY
            ProteinModelPortal:P46063 SMR:P46063 DIP:DIP-29216N IntAct:P46063
            STRING:P46063 PhosphoSite:P46063 DMDM:218512113 PaxDb:P46063
            PRIDE:P46063 DNASU:5965 Ensembl:ENST00000421138
            Ensembl:ENST00000444129 GeneID:5965 KEGG:hsa:5965 UCSC:uc001rex.3
            CTD:5965 GeneCards:GC12M021621 H-InvDB:HIX0010478 HGNC:HGNC:9948
            HPA:CAB009743 HPA:HPA030960 MIM:600537 neXtProt:NX_P46063
            PharmGKB:PA34315 HOVERGEN:HBG057654 InParanoid:P46063
            PhylomeDB:P46063 ChEMBL:CHEMBL1293236 ChiTaRS:RECQL
            EvolutionaryTrace:P46063 GenomeRNAi:5965 NextBio:23220
            ArrayExpress:P46063 Bgee:P46063 CleanEx:HS_RECQL
            Genevestigator:P46063 GermOnline:ENSG00000004700 Uniprot:P46063
        Length = 649

 Score = 366 (133.9 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
 Identities = 63/108 (58%), Positives = 82/108 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRR ++A +FDE W+   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNISKCRRVLMAQHFDEVWNSEACNKMCDNC 478

 Score = 140 (54.3 bits), Expect = 2.2e-45, Sum P(2) = 2.2e-45
 Identities = 26/63 (41%), Positives = 42/63 (66%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP+  +D ++++  L++ R++ QSGIIY  S K+ E +   L+N G+   AYHA
Sbjct:   287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQNLGIHAGAYHA 346

Query:   109 KLE 111
              LE
Sbjct:   347 NLE 349

 Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WSANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400


>RGD|1311071 [details] [associations]
            symbol:Recql "RecQ protein-like (DNA helicase Q1-like)"
            species:10116 "Rattus norvegicus" [GO:0000733 "DNA strand
            renaturation" evidence=IEA;ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
            evidence=IEA;ISO] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0008150 "biological_process"
            evidence=ND] [GO:0015630 "microtubule cytoskeleton"
            evidence=IEA;ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
            InterPro:IPR001650 InterPro:IPR004589 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF09382
            PROSITE:PS51194 SMART:SM00490 RGD:1311071 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            KO:K10899 HOGENOM:HOG000044388 CTD:5965 HOVERGEN:HBG057654
            EMBL:BC079026 IPI:IPI00366306 RefSeq:NP_001012098.1
            UniGene:Rn.203166 ProteinModelPortal:Q6AYJ1 SMR:Q6AYJ1
            STRING:Q6AYJ1 PRIDE:Q6AYJ1 Ensembl:ENSRNOT00000065576 GeneID:312824
            KEGG:rno:312824 UCSC:RGD:1311071 NextBio:665291 ArrayExpress:Q6AYJ1
            Genevestigator:Q6AYJ1 GermOnline:ENSRNOG00000012602 Uniprot:Q6AYJ1
        Length = 621

 Score = 369 (135.0 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
 Identities = 65/108 (60%), Positives = 83/108 (76%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRRA+IA +FDE W+   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNC 478

 Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400

 Score = 134 (52.2 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
 Identities = 24/63 (38%), Positives = 43/63 (68%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP++ +D ++ +A+L++ R++ +SGIIY  S K+ E +   L+  G+R   YHA
Sbjct:   287 YYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349


>UNIPROTKB|Q6AYJ1 [details] [associations]
            symbol:Recql "ATP-dependent DNA helicase Q1" species:10116
            "Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF09382 PROSITE:PS51194 SMART:SM00490 RGD:1311071
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            KO:K10899 HOGENOM:HOG000044388 CTD:5965 HOVERGEN:HBG057654
            EMBL:BC079026 IPI:IPI00366306 RefSeq:NP_001012098.1
            UniGene:Rn.203166 ProteinModelPortal:Q6AYJ1 SMR:Q6AYJ1
            STRING:Q6AYJ1 PRIDE:Q6AYJ1 Ensembl:ENSRNOT00000065576 GeneID:312824
            KEGG:rno:312824 UCSC:RGD:1311071 NextBio:665291 ArrayExpress:Q6AYJ1
            Genevestigator:Q6AYJ1 GermOnline:ENSRNOG00000012602 Uniprot:Q6AYJ1
        Length = 621

 Score = 369 (135.0 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
 Identities = 65/108 (60%), Positives = 83/108 (76%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDWRADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRRA+IA +FDE W+   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNC 478

 Score = 138 (53.6 bits), Expect = 1.0e-06, P = 1.0e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400

 Score = 134 (52.2 bits), Expect = 2.9e-45, Sum P(2) = 2.9e-45
 Identities = 24/63 (38%), Positives = 43/63 (68%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP++ +D ++ +A+L++ R++ +SGIIY  S K+ E +   L+  G+R   YHA
Sbjct:   287 YYEVRQKPSSAEDFIENIANLINGRYKGKSGIIYCFSQKDSEQVTISLQKLGVRAGTYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349


>ZFIN|ZDB-GENE-050809-134 [details] [associations]
            symbol:recql "RecQ protein-like (DNA helicase
            Q1-like)" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF09382 PROSITE:PS51194
            SMART:SM00490 ZFIN:ZDB-GENE-050809-134 GO:GO:0005524 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            EMBL:BX914215 IPI:IPI00933301 Ensembl:ENSDART00000101198
            Uniprot:F1Q4T3
        Length = 640

 Score = 364 (133.2 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 65/120 (54%), Positives = 90/120 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDK +VRFVIHH +SKS+EN+YQESGRAGRD   A CI+++   D+F++S+MV
Sbjct:   375 TVAFGMGIDKADVRFVIHHTISKSIENYYQESGRAGRDDSPADCIVFFGFMDIFRISTMV 434

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
               + TG   L+N+V+YC +  RCRRA++A +FDE W+D EC  MCD CR G  D   +D+
Sbjct:   435 VMENTGQQKLHNMVAYCQNVDRCRRAMMAIHFDEVWNDEECNEMCDVCRHGN-DYITMDI 493

 Score = 135 (52.6 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 26/63 (41%), Positives = 40/63 (63%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR K    +DC D++A L+  R++NQSGI+Y  S K+ E +  EL+ R +    YHA
Sbjct:   293 YYEVRFKD--NEDCTDQIASLIRGRYKNQSGIVYVFSQKDAEVVATELQKRDIVAQPYHA 350

Query:   109 KLE 111
              +E
Sbjct:   351 NME 353

 Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 24/41 (58%), Positives = 32/41 (78%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W +   QV   ++AFG+GIDK +VRFVIHH +SKS+EN+YQ
Sbjct:   364 WSSKKIQVVVATVAFGMGIDKADVRFVIHHTISKSIENYYQ 404


>UNIPROTKB|A0JN36 [details] [associations]
            symbol:RECQL "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0015630 "microtubule cytoskeleton" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0003678 "DNA helicase
            activity" evidence=IEA] [GO:0000733 "DNA strand renaturation"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            GO:GO:0000733 GO:GO:0008026 KO:K10899 OMA:ESSQTCH
            HOGENOM:HOG000044388 CTD:5965 HOVERGEN:HBG057654 OrthoDB:EOG4THVSK
            EMBL:DAAA02014122 EMBL:DAAA02014123 EMBL:BC126495 IPI:IPI00692480
            RefSeq:NP_001071459.1 UniGene:Bt.13736 SMR:A0JN36 STRING:A0JN36
            Ensembl:ENSBTAT00000028079 GeneID:533006 KEGG:bta:533006
            InParanoid:A0JN36 NextBio:20875874 Uniprot:A0JN36
        Length = 649

 Score = 370 (135.3 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 65/108 (60%), Positives = 81/108 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDMKADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC +  +CRR +IA +FDE WS   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNINKCRRVLIAQHFDEVWSPEACNKMCDNC 478

 Score = 138 (53.6 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WAANEIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400

 Score = 129 (50.5 bits), Expect = 1.1e-44, Sum P(2) = 1.1e-44
 Identities = 24/63 (38%), Positives = 41/63 (65%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP+  +D ++++  L++ R++ QSGIIY  S K+ E +   L+  G+   AYHA
Sbjct:   287 YYEVRQKPSNTEDFIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTISLQKLGIPAGAYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349

 Score = 41 (19.5 bits), Expect = 5.1e-07, Sum P(2) = 5.1e-07
 Identities = 15/53 (28%), Positives = 28/53 (52%)

Query:    86 IKECEDLREELRNRGLRVSAYHAKLESNVSIAFGLG---IDKPNVRFVIHHCL 135
             +K+ EDL E+L    L + ++  K  S + +A GL    + + ++  +I H L
Sbjct:   500 LKQAEDLNEKLTPLKL-IDSWMGKGASKLRVA-GLAPPTLPREDLEKIIAHFL 550


>MGI|MGI:103021 [details] [associations]
            symbol:Recql "RecQ protein-like" species:10090 "Mus musculus"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000733 "DNA
            strand renaturation" evidence=ISO] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003678 "DNA helicase activity" evidence=ISO] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0032508 "DNA duplex
            unwinding" evidence=ISO] [GO:0043140 "ATP-dependent 3'-5' DNA
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF09382 PROSITE:PS51194
            SMART:SM00490 MGI:MGI:103021 GO:GO:0005524 GO:GO:0005634
            GO:GO:0015630 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            GO:GO:0000733 EMBL:CH466572 KO:K10899 OMA:ESSQTCH
            HOGENOM:HOG000044388 CTD:5965 HOVERGEN:HBG057654 EMBL:AB017104
            EMBL:AB017105 EMBL:AK137589 EMBL:AK164344 IPI:IPI00129401
            IPI:IPI00230278 RefSeq:NP_001191836.1 RefSeq:NP_075529.2
            UniGene:Mm.27407 ProteinModelPortal:Q9Z129 SMR:Q9Z129 STRING:Q9Z129
            PhosphoSite:Q9Z129 PaxDb:Q9Z129 PRIDE:Q9Z129
            Ensembl:ENSMUST00000032370 Ensembl:ENSMUST00000111803 GeneID:19691
            KEGG:mmu:19691 InParanoid:Q3TPI5 OrthoDB:EOG4THVSK NextBio:297024
            Bgee:Q9Z129 CleanEx:MM_RECQL Genevestigator:Q9Z129
            GermOnline:ENSMUSG00000030243 Uniprot:Q9Z129
        Length = 648

 Score = 368 (134.6 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
 Identities = 64/108 (59%), Positives = 82/108 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDSRADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRR +IA +FDE W+   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNVSKCRRVLIAQHFDEVWNADACNKMCDNC 478

 Score = 138 (53.6 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 26/41 (63%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ
Sbjct:   360 WSANELQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQ 400

 Score = 131 (51.2 bits), Expect = 1.2e-44, Sum P(2) = 1.2e-44
 Identities = 24/63 (38%), Positives = 40/63 (63%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             FY+VR KP++ +D  +++  L++ R++ QSGIIY  S K+ E +   L+  G+    YHA
Sbjct:   287 FYEVRQKPSSAEDFTEDIVKLINGRYKGQSGIIYCFSQKDSEQITISLQKLGIHAGTYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349


>UNIPROTKB|F1PNP1 [details] [associations]
            symbol:RECQL "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0003676 "nucleic acid binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF09382 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006310 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 GeneTree:ENSGT00550000074520
            TIGRFAMs:TIGR00614 KO:K10899 OMA:ESSQTCH CTD:5965 EMBL:AAEX03015200
            RefSeq:XP_543768.1 Ensembl:ENSCAFT00000019449 GeneID:486641
            KEGG:cfa:486641 Uniprot:F1PNP1
        Length = 646

 Score = 362 (132.5 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
 Identities = 62/108 (57%), Positives = 82/108 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRF+IHH +SKS+EN+YQESGRAGRD   A CILYY   D+F++SSMV
Sbjct:   371 TVAFGMGIDKPDVRFIIHHSMSKSIENYYQESGRAGRDDMKADCILYYGFGDIFRISSMV 430

Query:   175 FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +  G   LY +VSYC + ++CRR +IA +FDE W+   C  MCD+C
Sbjct:   431 VMENVGQQKLYEMVSYCQNISKCRRVLIAQHFDEVWNAEACNRMCDNC 478

 Score = 133 (51.9 bits), Expect = 3.3e-44, Sum P(2) = 3.3e-44
 Identities = 23/63 (36%), Positives = 42/63 (66%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y++R KP+  +D ++++  L++ R++ QSGIIY  S K+ E +   L+  G++  AYHA
Sbjct:   287 YYEIRQKPSNTEDVIEDIVKLINGRYKGQSGIIYCFSQKDSEQVTVSLQKLGIQAGAYHA 346

Query:   109 KLE 111
              +E
Sbjct:   347 NME 349

 Score = 133 (51.9 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 24/41 (58%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GIDKP+VRF+IHH +SKS+EN+YQ
Sbjct:   360 WSANEIQVVVATVAFGMGIDKPDVRFIIHHSMSKSIENYYQ 400

 Score = 36 (17.7 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 13/53 (24%), Positives = 28/53 (52%)

Query:    86 IKECEDLREELRNRGLRVSAYHAKLESNVSIAFGLG---IDKPNVRFVIHHCL 135
             +K+ EDL E+L    L + ++  K  + + +A G+    + + ++  +I H L
Sbjct:   500 LKQAEDLNEKLTPLKL-IDSWMGKGAAKLRVA-GVAPPKLPREDLEKIIAHLL 550


>UNIPROTKB|F1NPI7 [details] [associations]
            symbol:RECQL "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0000733 "DNA strand renaturation"
            evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0015630 "microtubule
            cytoskeleton" evidence=IEA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0000733
            GO:GO:0008026 OMA:ESSQTCH EMBL:AADN02006609 IPI:IPI00602593
            Ensembl:ENSGALT00000021517 Uniprot:F1NPI7
        Length = 661

 Score = 455 (165.2 bits), Expect = 5.9e-43, P = 5.9e-43
 Identities = 85/192 (44%), Positives = 123/192 (64%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+VR KP+  +D ++++  L++ R++  SGI+Y  S K+ E +   L+  G++   YHA
Sbjct:   287 YYEVRHKPSNNEDFIEDIVKLINGRYKGLSGIVYCFSQKDSEQVTVSLQKLGIKAGTYHA 346

Query:   109 KLESN------------------VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
              +++                    ++AFG+GIDKP+VRFVIHH +SKSMEN+YQESGRAG
Sbjct:   347 NMDAKYKTKVHKGWAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAG 406

Query:   151 RDGQIAHCILYYRLPDVFKLSSMVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAW 210
             RD Q A CILYY   D+F++SSMV  +  G   LY++VSYC +  +CRR +IA +FDE W
Sbjct:   407 RDDQKADCILYYGFGDIFRISSMVVMENVGQEKLYDMVSYCQNMNKCRRVLIARHFDEVW 466

Query:   211 SDTECRGMCDHC 222
                 C  MCD+C
Sbjct:   467 ESANCNRMCDNC 478

 Score = 139 (54.0 bits), Expect = 8.8e-07, P = 8.8e-07
 Identities = 31/56 (55%), Positives = 39/56 (69%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQV--RIKPAAQK-DCL 63
             W  +  QV   ++AFG+GIDKP+VRFVIHH +SKSMEN+YQ   R     QK DC+
Sbjct:   360 WAANQIQVVVATVAFGMGIDKPDVRFVIHHSMSKSMENYYQESGRAGRDDQKADCI 415


>ASPGD|ASPL0000045206 [details] [associations]
            symbol:musN species:162425 "Emericella nidulans"
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0006281 "DNA repair" evidence=IMP] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
            EMBL:BN001307 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0005622 GO:GO:0006310 EMBL:AACD01000032
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            KO:K10901 Gene3D:1.10.150.80 TIGRFAMs:TIGR00614 RefSeq:XP_659691.1
            ProteinModelPortal:G5EB35 EnsemblFungi:CADANIAT00008758
            GeneID:2875310 KEGG:ani:AN2087.2 HOGENOM:HOG000182791 OMA:EERQWIM
            Uniprot:G5EB35
        Length = 1534

 Score = 279 (103.3 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
 Identities = 55/119 (46%), Positives = 76/119 (63%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VRFVIHH + KS+E +YQE+GRAGRDG+ + C LY+   DV  + SM+
Sbjct:   986 TIAFGMGIDKPDVRFVIHHSIPKSLEGYYQETGRAGRDGRRSGCYLYFSHRDVSTMQSMI 1045

Query:   175 F------DQQTGLAN--LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGG 225
                    D Q G     L ++V YC +   CRR  I +YF E++   +C   CD+C+ G
Sbjct:  1046 EKNEDSDDVQKGRQTRMLNDVVKYCENANDCRRVQILAYFSESFKRQDCNASCDNCKSG 1104

 Score = 122 (48.0 bits), Expect = 0.00024, P = 0.00024
 Identities = 21/30 (70%), Positives = 27/30 (90%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             +IAFG+GIDKP+VRFVIHH + KS+E +YQ
Sbjct:   986 TIAFGMGIDKPDVRFVIHHSIPKSLEGYYQ 1015

 Score = 109 (43.4 bits), Expect = 3.0e-31, Sum P(2) = 3.0e-31
 Identities = 24/64 (37%), Positives = 36/64 (56%)

Query:    50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR-NRGLRVSAYHA 108
             Y+VR K     + LD +AD +   +RN+ GI+Y  S   CE + E LR N  ++   YHA
Sbjct:   903 YEVRRK-GKHAELLDSIADTIKSTYRNKCGIVYCLSRNTCEKVAEALRTNYSIKAEHYHA 961

Query:   109 KLES 112
              L++
Sbjct:   962 GLDA 965


>CGD|CAL0004296 [details] [associations]
            symbol:SGS1 species:5476 "Candida albicans" [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0001302
            "replicative cell aging" evidence=IMP] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0031422 "RecQ helicase-Topo III complex"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0044182
            "filamentous growth of a population of unicellular organisms"
            evidence=IMP] [GO:0031860 "telomeric 3' overhang formation"
            evidence=IEA] [GO:0000706 "meiotic DNA double-strand break
            processing" evidence=IEA] [GO:0006268 "DNA unwinding involved in
            replication" evidence=IEA] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IEA] [GO:0031573 "intra-S DNA damage
            checkpoint" evidence=IEA] [GO:0031292 "gene conversion at
            mating-type locus, DNA double-strand break processing"
            evidence=IEA] [GO:0000722 "telomere maintenance via recombination"
            evidence=IEA] [GO:0010947 "negative regulation of meiotic joint
            molecule formation" evidence=IEA] [GO:0000724 "double-strand break
            repair via homologous recombination" evidence=IEA] [GO:0045132
            "meiotic chromosome segregation" evidence=IEA] [GO:0030447
            "filamentous growth" evidence=IMP] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00490 SMART:SM00956
            CGD:CAL0004296 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0003676
            GO:GO:0006974 GO:GO:0005622 GO:GO:0006310 EMBL:AACQ01000059
            EMBL:AACQ01000058 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 eggNOG:COG0514 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0044182 RefSeq:XP_717059.1
            RefSeq:XP_717138.1 ProteinModelPortal:Q5A5R4 STRING:Q5A5R4
            GeneID:3641258 GeneID:3641294 KEGG:cal:CaO19.12795
            KEGG:cal:CaO19.5335 Uniprot:Q5A5R4
        Length = 1189

 Score = 269 (99.8 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
 Identities = 51/117 (43%), Positives = 75/117 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VRFVIH  L +++E +YQE+GRAGRDG  + C++YY   D   L +++
Sbjct:   744 TIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKDARSLQNLI 803

Query:   175 F-DQQ---TG----LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
               D++   +G    LA L  ++ YC + T CRR  +  YF+E +    C   CD+CR
Sbjct:   804 QRDEELSESGRESHLAKLRQVIQYCENTTDCRRKQVLQYFNETFDPANCHKQCDNCR 860

 Score = 116 (45.9 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             FY++++K   + +CL E+ D +  RF  +SGIIY  S + CE    +L   GL+ S YHA
Sbjct:   663 FYEIKLK---KSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHA 719

Query:   109 KLESN 113
              + ++
Sbjct:   720 GMSAD 724


>UNIPROTKB|Q5A5R4 [details] [associations]
            symbol:SGS1 "Putative uncharacterized protein SGS1"
            species:237561 "Candida albicans SC5314" [GO:0001302 "replicative
            cell aging" evidence=IMP] [GO:0006974 "response to DNA damage
            stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
            evidence=IMP] [GO:0044182 "filamentous growth of a population of
            unicellular organisms" evidence=IMP] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00490 SMART:SM00956
            CGD:CAL0004296 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0003676
            GO:GO:0006974 GO:GO:0005622 GO:GO:0006310 EMBL:AACQ01000059
            EMBL:AACQ01000058 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 eggNOG:COG0514 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0044182 RefSeq:XP_717059.1
            RefSeq:XP_717138.1 ProteinModelPortal:Q5A5R4 STRING:Q5A5R4
            GeneID:3641258 GeneID:3641294 KEGG:cal:CaO19.12795
            KEGG:cal:CaO19.5335 Uniprot:Q5A5R4
        Length = 1189

 Score = 269 (99.8 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
 Identities = 51/117 (43%), Positives = 75/117 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VRFVIH  L +++E +YQE+GRAGRDG  + C++YY   D   L +++
Sbjct:   744 TIAFGMGIDKPDVRFVIHLYLPRTLEGYYQETGRAGRDGNFSECVMYYCYKDARSLQNLI 803

Query:   175 F-DQQ---TG----LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
               D++   +G    LA L  ++ YC + T CRR  +  YF+E +    C   CD+CR
Sbjct:   804 QRDEELSESGRESHLAKLRQVIQYCENTTDCRRKQVLQYFNETFDPANCHKQCDNCR 860

 Score = 116 (45.9 bits), Expect = 3.2e-31, Sum P(2) = 3.2e-31
 Identities = 24/65 (36%), Positives = 39/65 (60%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             FY++++K   + +CL E+ D +  RF  +SGIIY  S + CE    +L   GL+ S YHA
Sbjct:   663 FYEIKLK---KSNCLLEIKDYILSRFSGKSGIIYCHSKQSCEHTSMKLNEYGLKTSFYHA 719

Query:   109 KLESN 113
              + ++
Sbjct:   720 GMSAD 724


>TAIR|locus:2197555 [details] [associations]
            symbol:RECQL2 "RECQ helicase L2" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA;ISS] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0016592 "mediator complex" evidence=IDA] [GO:0006281 "DNA
            repair" evidence=IC] [GO:0006310 "DNA recombination" evidence=IC]
            [GO:0009378 "four-way junction helicase activity" evidence=IDA]
            [GO:0043138 "3'-5' DNA helicase activity" evidence=IDA] [GO:0000278
            "mitotic cell cycle" evidence=RCA] [GO:0006396 "RNA processing"
            evidence=RCA] [GO:0010413 "glucuronoxylan metabolic process"
            evidence=RCA] [GO:0045492 "xylan biosynthetic process"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
            GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
            GO:GO:0006310 EMBL:AC007654 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 eggNOG:COG0514 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0009378 GO:GO:0016592 GO:GO:0043138
            EMBL:AJ404471 IPI:IPI00518751 IPI:IPI00846160 RefSeq:NP_001077639.1
            RefSeq:NP_174421.2 UniGene:At.40359 HSSP:P15043
            ProteinModelPortal:Q9FT73 SMR:Q9FT73 IntAct:Q9FT73 STRING:Q9FT73
            PaxDb:Q9FT73 PRIDE:Q9FT73 EnsemblPlants:AT1G31360.1 GeneID:840026
            KEGG:ath:AT1G31360 TAIR:At1g31360 InParanoid:Q9FT73 KO:K10899
            OMA:ESSQTCH PhylomeDB:Q9FT73 ProtClustDB:CLSN2680338
            Genevestigator:Q9FT73 Uniprot:Q9FT73
        Length = 705

 Score = 351 (128.6 bits), Expect = 3.2e-31, P = 3.2e-31
 Identities = 82/178 (46%), Positives = 111/178 (62%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV-SI 116
             ++K+C     DL   R R  S   Y   +    ++RE++  R  +      KL+  V ++
Sbjct:   322 SRKECEQIAGDL---RERGISADYYHADMDA--NMREKVHMRWSK-----NKLQVIVGTV 371

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD 176
             AFG+GI+KP+VRFVIHH LSKSME +YQESGRAGRDG  + CIL++R  DV + SSMVF 
Sbjct:   372 AFGMGINKPDVRFVIHHSLSKSMETYYQESGRAGRDGLPSECILFFRSADVPRQSSMVFY 431

Query:   177 QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKRVDV 234
             + +GL NLY+IV YC  +T+CRR+    +F E   D  C GMCD+C     + K VDV
Sbjct:   432 EYSGLQNLYDIVRYCQSKTKCRRSAFFRHFGEPSQD--CNGMCDNCALSS-EVKEVDV 486

 Score = 142 (55.0 bits), Expect = 4.2e-07, P = 4.2e-07
 Identities = 28/67 (41%), Positives = 42/67 (62%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRF-RNQSGIIYTTSIKECEDLREELRNRGLRVSAYH 107
             FY VR K A  K  +DE+A+ +   +  N+SGI+Y  S KECE +  +LR RG+    YH
Sbjct:   285 FYSVREKSAVGKLVVDEIAEFIRESYSNNESGIVYCFSRKECEQIAGDLRERGISADYYH 344

Query:   108 AKLESNV 114
             A +++N+
Sbjct:   345 ADMDANM 351

 Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
 Identities = 25/41 (60%), Positives = 32/41 (78%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W  +  QV   ++AFG+GI+KP+VRFVIHH LSKSME +YQ
Sbjct:   359 WSKNKLQVIVGTVAFGMGINKPDVRFVIHHSLSKSMETYYQ 399


>FB|FBgn0002906 [details] [associations]
            symbol:Blm "Bloom syndrome helicase ortholog" species:7227
            "Drosophila melanogaster" [GO:0006302 "double-strand break repair"
            evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
            evidence=IGI;IMP] [GO:0004386 "helicase activity" evidence=ISS]
            [GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0000731 "DNA
            synthesis involved in DNA repair" evidence=IMP] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0045003 "double-strand break repair via synthesis-dependent
            strand annealing" evidence=IMP] [GO:0032508 "DNA duplex unwinding"
            evidence=IDA] [GO:0000732 "strand displacement" evidence=IDA]
            [GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
            [GO:0000403 "Y-form DNA binding" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0000733 "DNA strand renaturation"
            evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IDA] [GO:0000724 "double-strand break repair via
            homologous recombination" evidence=IMP] [GO:0007131 "reciprocal
            meiotic recombination" evidence=IMP] [GO:1901291 "negative
            regulation of double-strand break repair via single-strand
            annealing" evidence=IMP] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00490 SMART:SM00956 EMBL:AE014297
            GO:GO:0005524 GO:GO:0005634 GO:GO:0006260 Gene3D:1.10.10.10
            InterPro:IPR011991 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0007131 GO:GO:0045003 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 EMBL:U92536 RefSeq:NP_524319.2
            UniGene:Dm.2444 ProteinModelPortal:Q9VGI8 SMR:Q9VGI8 DIP:DIP-23386N
            MINT:MINT-784091 STRING:Q9VGI8 PaxDb:Q9VGI8 PRIDE:Q9VGI8
            EnsemblMetazoa:FBtr0082434 GeneID:41366 KEGG:dme:Dmel_CG6920
            CTD:41366 FlyBase:FBgn0002906 InParanoid:Q9VGI8 OMA:KISSSAR
            OrthoDB:EOG4JDFNV PhylomeDB:Q9VGI8 ChiTaRS:BLM GenomeRNAi:41366
            NextBio:823498 Bgee:Q9VGI8 GermOnline:CG6920 GO:GO:0000403
            GO:GO:0000733 GO:GO:0000731 GO:GO:1901291 GO:GO:0000732
            Uniprot:Q9VGI8
        Length = 1487

 Score = 279 (103.3 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
 Identities = 60/132 (45%), Positives = 80/132 (60%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFV+H+ L KS+E +YQE+GRAGRDG +A CILYY   D+ ++  M+
Sbjct:  1015 TVAFGMGIDKPDVRFVLHYSLPKSIEGYYQEAGRAGRDGDVADCILYYNYSDMLRIKKML 1074

Query:   175 FDQQTGLA---------NLYNIVSYCLDQTRCRRAIIASYFDEAWSDTEC----RGMCDH 221
              D    L          NLY IV YC + T CRRA    YF E ++  +C       CD+
Sbjct:  1075 -DSDKALQYNVKKIHVDNLYRIVGYCENLTDCRRAQQLDYFGEHFTSEQCLENRETACDN 1133

Query:   222 CRGGRRDAKRVD 233
             C   +R  K VD
Sbjct:  1134 CIN-KRAYKAVD 1144

 Score = 91 (37.1 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query:    42 LSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
             LS    +  + R+ P      LD+++  +  + ++ SGIIY  S KEC++  +++   G+
Sbjct:   924 LSSFNRSNLRYRVLPKKGVSTLDDISRYIRSKPQHFSGIIYCLSRKECDETSKKMCKDGV 983

Query:   102 RVSAYHAKL 110
             R  +YHA L
Sbjct:   984 RAVSYHAGL 992

 Score = 36 (17.7 bits), Expect = 1.2e-30, Sum P(3) = 1.2e-30
 Identities = 7/11 (63%), Positives = 8/11 (72%)

Query:   223 RGGRRDAKRVD 233
             RGGR  AKR +
Sbjct:  1448 RGGRAGAKRAE 1458


>DICTYBASE|DDB_G0272384 [details] [associations]
            symbol:DDB_G0272384 "Bloom syndrome-like protein"
            species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0272384 GO:GO:0005524
            GO:GO:0005634 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 EMBL:AAFI02000008 GO:GO:0004003 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514 KO:K10901
            TIGRFAMs:TIGR00614 RefSeq:XP_645178.2 ProteinModelPortal:Q55A06
            EnsemblProtists:DDB0233085 GeneID:8618350 KEGG:ddi:DDB_G0272384
            OMA:YQQTGRA Uniprot:Q55A06
        Length = 973

 Score = 182 (69.1 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
 Identities = 30/60 (50%), Positives = 47/60 (78%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK + RFVIHH + +SME++YQ++GRAGRDG+ + C+L+Y   D+ +   ++
Sbjct:   759 TIAFGMGIDKGDTRFVIHHSMPQSMESYYQQTGRAGRDGKHSDCLLFYNKSDLMRFKHII 818

 Score = 126 (49.4 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
 Identities = 24/63 (38%), Positives = 41/63 (65%)

Query:    50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAK 109
             YQVR K + ++  L ++ + +S ++ N +GIIY  +++ECE + + L  RGL  + YHAK
Sbjct:   676 YQVRQKQSDEESLLKDIYNFISFKYPNSTGIIYCATVRECEIVADYLSERGLSSNFYHAK 735

Query:   110 LES 112
             L +
Sbjct:   736 LSN 738

 Score = 114 (45.2 bits), Expect = 1.2e-08, Sum P(2) = 1.2e-08
 Identities = 29/71 (40%), Positives = 43/71 (60%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQV--RI-KPAAQKDCL--DE 65
             W    +++   +IAFG+GIDK + RFVIHH + +SME++YQ   R  +     DCL    
Sbjct:   748 WTNGEFKIVCTTIAFGMGIDKGDTRFVIHHSMPQSMESYYQQTGRAGRDGKHSDCLLFYN 807

Query:    66 LADLMSRRFRN 76
              +DLM  RF++
Sbjct:   808 KSDLM--RFKH 816

 Score = 90 (36.7 bits), Expect = 2.3e-30, Sum P(3) = 2.3e-30
 Identities = 19/48 (39%), Positives = 27/48 (56%)

Query:   177 QQTG--LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
             QQT   L  L ++ S+C  Q++CRR  + +YF E  +   C  MCD C
Sbjct:   874 QQTSTKLEMLDSVASFCSTQSKCRRVTLLNYFGE--NSKSCGNMCDIC 919


>SGD|S000004802 [details] [associations]
            symbol:SGS1 "Nucleolar DNA helicase of the RecQ family"
            species:4932 "Saccharomyces cerevisiae" [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0000722 "telomere maintenance via
            recombination" evidence=IGI;IMP] [GO:0031860 "telomeric 3' overhang
            formation" evidence=IGI] [GO:0005634 "nucleus" evidence=IEA;IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000706 "meiotic
            DNA double-strand break processing" evidence=IGI] [GO:0000166
            "nucleotide binding" evidence=IEA] [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0044237 "cellular metabolic process"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0010520
            "regulation of reciprocal meiotic recombination" evidence=IGI]
            [GO:0031573 "intra-S DNA damage checkpoint" evidence=IGI;IMP]
            [GO:0000724 "double-strand break repair via homologous
            recombination" evidence=IGI;IMP] [GO:0031292 "gene conversion at
            mating-type locus, DNA double-strand break processing"
            evidence=IGI] [GO:0000729 "DNA double-strand break processing"
            evidence=IGI] [GO:0032508 "DNA duplex unwinding" evidence=IDA]
            [GO:0031422 "RecQ helicase-Topo III complex" evidence=IDA;IPI]
            [GO:0001302 "replicative cell aging" evidence=IMP] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0010947 "negative regulation of meiotic joint
            molecule formation" evidence=IGI] [GO:0045132 "meiotic chromosome
            segregation" evidence=IMP] [GO:0000070 "mitotic sister chromatid
            segregation" evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase
            activity" evidence=IDA] [GO:0006268 "DNA unwinding involved in
            replication" evidence=IDA] [GO:0051276 "chromosome organization"
            evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
            evidence=IMP] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00490 SMART:SM00956 SGD:S000004802
            GO:GO:0005524 GO:GO:0005730 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0001302 GO:GO:0003676 EMBL:BK006946 GO:GO:0000070
            GO:GO:0004003 GO:GO:0000724 GO:GO:0045132 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000706
            GO:GO:0000722 eggNOG:COG0514 GeneTree:ENSGT00550000074520 KO:K10901
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0031573
            EMBL:Z47815 GO:GO:0031292 GO:GO:0031860 GO:GO:0006268
            OrthoDB:EOG4XSPZ5 GO:GO:0031422 EMBL:U22341 EMBL:L07870 PIR:S50918
            RefSeq:NP_013915.1 PDB:1D8B PDBsum:1D8B ProteinModelPortal:P35187
            SMR:P35187 DIP:DIP-2911N IntAct:P35187 MINT:MINT-442647
            STRING:P35187 PeptideAtlas:P35187 EnsemblFungi:YMR190C
            GeneID:855228 KEGG:sce:YMR190C CYGD:YMR190c HOGENOM:HOG000141897
            OMA:TIFEICD EvolutionaryTrace:P35187 NextBio:978762
            Genevestigator:P35187 GermOnline:YMR190C GO:GO:0010947
            InterPro:IPR022758 Pfam:PF11408 Uniprot:P35187
        Length = 1447

 Score = 257 (95.5 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
 Identities = 47/117 (40%), Positives = 75/117 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VRFV H  + +++E +YQE+GRAGRDG  ++CI Y+   D+  + +M+
Sbjct:   957 TVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYFSFRDIRTMQTMI 1016

Query:   175 -----FDQQTG---LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
                   D++     L  L  +++YC + T CRR ++ SYF+E +    C   CD+CR
Sbjct:  1017 QKDKNLDRENKEKHLNKLQQVMAYCDNVTDCRRKLVLSYFNEDFDSKLCHKNCDNCR 1073

 Score = 117 (46.2 bits), Expect = 7.9e-30, Sum P(2) = 7.9e-30
 Identities = 23/63 (36%), Positives = 38/63 (60%)

Query:    49 FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +Y+V  K    K+ + E+ D +  RF+NQ+GIIY  S K CE    +++  G++ + YHA
Sbjct:   876 YYEVNKKT---KNTIFEICDAVKSRFKNQTGIIYCHSKKSCEQTSAQMQRNGIKCAYYHA 932

Query:   109 KLE 111
              +E
Sbjct:   933 GME 935

 Score = 45 (20.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
 Identities = 19/91 (20%), Positives = 39/91 (42%)

Query:    27 LGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSI 86
             LG    N   + +  + K +EN  ++ +    Q   +  L +  S+    +  II +TS+
Sbjct:   151 LGSRNNNKSVIDNSSIGKQLENDIKLEVI-RLQGSLIMALKE-QSKLLLQKCSIIESTSL 208

Query:    87 KE-------CEDLREELRNRGLRVSAYHAKL 110
              E         D+R +L N  +R+ +   ++
Sbjct:   209 SEDAKRLQLSRDIRPQLSNMSIRIDSLEKEI 239

 Score = 41 (19.5 bits), Expect = 7.0e-22, Sum P(2) = 7.0e-22
 Identities = 17/49 (34%), Positives = 22/49 (44%)

Query:    59 QKDCLDELADLMSRRFRNQ------SGIIYTTSIKECEDLREELRNRGL 101
             +KD +  L D MS  F  Q      S +    S KE ED  E+  N G+
Sbjct:   520 EKDAI--LDDSMSFSFGRQHMPMSHSDLELIDSEKENEDFEEDNNNNGI 566


>UNIPROTKB|Q9DEY9 [details] [associations]
            symbol:blm "Bloom syndrome protein homolog" species:8355
            "Xenopus laevis" [GO:0000729 "DNA double-strand break processing"
            evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012532 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF08072 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003677 GO:GO:0006260 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006310 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 HOVERGEN:HBG004850 GO:GO:0000729
            CTD:641 EMBL:AF307841 RefSeq:NP_001079095.1 UniGene:Xl.706
            ProteinModelPortal:Q9DEY9 GeneID:373628 KEGG:xla:373628
            Xenbase:XB-GENE-982565 Uniprot:Q9DEY9
        Length = 1364

 Score = 270 (100.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
 Identities = 58/133 (43%), Positives = 84/133 (63%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VR+VIH  L KS+E +YQESGRAGRDG+ +HC+L+Y   DV ++  ++
Sbjct:   898 TIAFGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGETSHCLLFYSYHDVTRIRRLI 957

Query:   175 --------FDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDTECRG----MCDH 221
                       +QT   NLY++V YC +   CRR  + SYF E  ++   C+      CD+
Sbjct:   958 QMEKDGNSHTKQTHFNNLYSMVHYCENVVECRRMQLLSYFGENNFNPNFCKEHTQVACDN 1017

Query:   222 CRGGRRDAKRVDV 234
             C G +++ K  DV
Sbjct:  1018 CLG-KKNYKSRDV 1029

 Score = 91 (37.1 bits), Expect = 1.5e-28, Sum P(2) = 1.5e-28
 Identities = 23/73 (31%), Positives = 37/73 (50%)

Query:    42 LSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
             +S + +N  +  + P   K    +  + + +   N SGIIY  S  EC+ + + L+  GL
Sbjct:   807 MSFNRDNL-KYEVLPKKPKRVALDCVEWIKKHHPNDSGIIYCLSRHECDTMADTLQKEGL 865

Query:   102 RVSAYHAKL-ESN 113
                AYHA L +SN
Sbjct:   866 AALAYHAGLADSN 878


>DICTYBASE|DDB_G0292130 [details] [associations]
            symbol:blm "Bloom syndrome protein" species:44689
            "Dictyostelium discoideum" [GO:0044237 "cellular metabolic process"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA;ISS] [GO:0006281 "DNA repair" evidence=IEA;ISS]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0003824 "catalytic activity" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0000166 "nucleotide binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00490 SMART:SM00956
            dictyBase:DDB_G0292130 GO:GO:0005524 GO:GO:0005634
            GenomeReviews:CM000155_GR EMBL:AAFI02000187 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 eggNOG:COG0514 KO:K10901
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614
            RefSeq:XP_629849.1 ProteinModelPortal:Q54DM3 STRING:Q54DM3
            EnsemblProtists:DDB0233082 GeneID:8628529 KEGG:ddi:DDB_G0292130
            InParanoid:Q54DM3 OMA:IANCEAS ProtClustDB:CLSZ2846594
            Uniprot:Q54DM3
        Length = 1259

 Score = 257 (95.5 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
 Identities = 51/119 (42%), Positives = 77/119 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GI+K +VRFVIHH + KS+E +YQESGRAGRDG I+HC+LY+   D  +   ++
Sbjct:   803 TIAFGMGINKADVRFVIHHSVPKSLEGYYQESGRAGRDGGISHCLLYFSWADKLRNDLLI 862

Query:   175 FDQQT-GLANLYN----------IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              +  T G  + +N          +V+YC ++T CRR +  +YF E +  + C+  CD+C
Sbjct:   863 QNSFTSGQGSSHNTRETRDSLNKMVNYCENETDCRRQLQLAYFGENFEKSGCKKTCDNC 921

 Score = 92 (37.4 bits), Expect = 2.3e-27, Sum P(2) = 2.3e-27
 Identities = 23/94 (24%), Positives = 45/94 (47%)

Query:    41 CLSKSMEN---FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELR 97
             C  +S       YQV  K    K  +D+++  +   + ++SGI+Y  S  +CE++ + LR
Sbjct:   711 CFKQSFNRPNLIYQVLKKT---KQVVDDMSKFIHSTYPDKSGIVYCISKYDCENVAKRLR 767

Query:    98 NRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVI 131
                +  + YHA LE++          K  ++ ++
Sbjct:   768 ELKISAAHYHAGLENDERAKVQANWQKGRIKVIV 801


>UNIPROTKB|F1ND40 [details] [associations]
            symbol:BLM "Bloom syndrome protein homolog" species:9031
            "Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0000079 "regulation of cyclin-dependent protein
            serine/threonine kinase activity" evidence=IEA] [GO:0000405 "bubble
            DNA binding" evidence=IEA] [GO:0000723 "telomere maintenance"
            evidence=IEA] [GO:0000729 "DNA double-strand break processing"
            evidence=IEA] [GO:0000781 "chromosome, telomeric region"
            evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
            [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0002039 "p53
            binding" evidence=IEA] [GO:0003697 "single-stranded DNA binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0005730 "nucleolus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0009378
            "four-way junction helicase activity" evidence=IEA] [GO:0010165
            "response to X-ray" evidence=IEA] [GO:0016363 "nuclear matrix"
            evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0031297
            "replication fork processing" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0045120 "pronucleus" evidence=IEA] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=IEA]
            [GO:0045950 "negative regulation of mitotic recombination"
            evidence=IEA] [GO:0046632 "alpha-beta T cell differentiation"
            evidence=IEA] [GO:0046641 "positive regulation of alpha-beta T cell
            proliferation" evidence=IEA] [GO:0051098 "regulation of binding"
            evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IEA]
            [GO:0051782 "negative regulation of cell division" evidence=IEA]
            [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012532 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0051259 GO:GO:0005524 GO:GO:0005737
            GO:GO:0045893 GO:GO:0000079 GO:GO:0005730 GO:GO:0016605
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            GO:GO:0001673 GO:GO:0003697 GO:GO:0016363 GO:GO:0010165
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GO:GO:0000781 GO:GO:0000723 GO:GO:0005657
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000733 GO:GO:0000800 GO:GO:0045120
            GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0051782
            GO:GO:0045950 GO:GO:0046641 GO:GO:0051098 GO:GO:0031297
            EMBL:AADN02038832 IPI:IPI00823016 Ensembl:ENSGALT00000038179
            ArrayExpress:F1ND40 Uniprot:F1ND40
        Length = 1142

 Score = 270 (100.1 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
 Identities = 58/133 (43%), Positives = 86/133 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VR+VIH  L KS+E +YQESGRAGRDG+++HC+L+Y   DV +L  ++
Sbjct:   676 TIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLI 735

Query:   175 F---D-----QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDTECRG----MCDH 221
                 D     +QT   NLY++V YC +   CRR  + +YF E  ++   C+     +CD+
Sbjct:   736 LMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDN 795

Query:   222 CRGGRRDAKRVDV 234
             C   ++D K  +V
Sbjct:   796 C-SRKKDYKSRNV 807

 Score = 76 (31.8 bits), Expect = 3.4e-27, Sum P(2) = 3.4e-27
 Identities = 31/113 (27%), Positives = 49/113 (43%)

Query:    11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSK------SME-NFYQVR--IKPAAQKD 61
             LN+ R  F+ V +        P V+  I + L        +M  N + ++  + P   K 
Sbjct:   544 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 603

Query:    62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN 113
                +  + + +   + SGIIY  S  EC+     L+  GL   AYHA L +SN
Sbjct:   604 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 656


>UNIPROTKB|F1P3V1 [details] [associations]
            symbol:BLM "Bloom syndrome protein homolog" species:9031
            "Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0051880 "G-quadruplex DNA binding" evidence=IEA] [GO:0000079
            "regulation of cyclin-dependent protein serine/threonine kinase
            activity" evidence=IEA] [GO:0000405 "bubble DNA binding"
            evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000781 "chromosome, telomeric region" evidence=IEA]
            [GO:0000800 "lateral element" evidence=IEA] [GO:0001673 "male germ
            cell nucleus" evidence=IEA] [GO:0002039 "p53 binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0005524
            "ATP binding" evidence=IEA] [GO:0005657 "replication fork"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0009378 "four-way junction helicase
            activity" evidence=IEA] [GO:0010165 "response to X-ray"
            evidence=IEA] [GO:0016363 "nuclear matrix" evidence=IEA]
            [GO:0016605 "PML body" evidence=IEA] [GO:0031297 "replication fork
            processing" evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA
            helicase activity" evidence=IEA] [GO:0045120 "pronucleus"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045950 "negative regulation of
            mitotic recombination" evidence=IEA] [GO:0046632 "alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046641 "positive regulation of
            alpha-beta T cell proliferation" evidence=IEA] [GO:0051098
            "regulation of binding" evidence=IEA] [GO:0051259 "protein
            oligomerization" evidence=IEA] [GO:0051782 "negative regulation of
            cell division" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012532 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF08072 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00490 SMART:SM00956 GO:GO:0051259 GO:GO:0005524
            GO:GO:0005737 GO:GO:0045893 GO:GO:0000079 GO:GO:0005730
            GO:GO:0016605 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006310 GO:GO:0001673 GO:GO:0003697 GO:GO:0016363
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0000781 GO:GO:0000723 GO:GO:0005657
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000733 GO:GO:0000800 GO:GO:0045120
            GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0051782
            GO:GO:0045950 GO:GO:0046641 GO:GO:0051098 GO:GO:0031297
            EMBL:AADN02038832 IPI:IPI00585933 Ensembl:ENSGALT00000013437
            OMA:CDTTAAI ArrayExpress:F1P3V1 Uniprot:F1P3V1
        Length = 1380

 Score = 270 (100.1 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
 Identities = 58/133 (43%), Positives = 86/133 (64%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VR+VIH  L KS+E +YQESGRAGRDG+++HC+L+Y   DV +L  ++
Sbjct:   914 TIAFGMGIDKPDVRYVIHASLPKSIEGYYQESGRAGRDGEMSHCLLFYSYSDVTRLRRLI 973

Query:   175 F---D-----QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDTECRG----MCDH 221
                 D     +QT   NLY++V YC +   CRR  + +YF E  ++   C+     +CD+
Sbjct:   974 LMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDN 1033

Query:   222 CRGGRRDAKRVDV 234
             C   ++D K  +V
Sbjct:  1034 C-SRKKDYKSRNV 1045

 Score = 76 (31.8 bits), Expect = 5.8e-27, Sum P(2) = 5.8e-27
 Identities = 31/113 (27%), Positives = 49/113 (43%)

Query:    11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSK------SME-NFYQVR--IKPAAQKD 61
             LN+ R  F+ V +        P V+  I + L        +M  N + ++  + P   K 
Sbjct:   782 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 841

Query:    62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN 113
                +  + + +   + SGIIY  S  EC+     L+  GL   AYHA L +SN
Sbjct:   842 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 894


>UNIPROTKB|Q9I920 [details] [associations]
            symbol:BLM "Bloom syndrome protein homolog" species:9031
            "Gallus gallus" [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000729 "DNA
            double-strand break processing" evidence=ISS] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012532 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006260 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            GO:GO:0004003 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 eggNOG:COG0514 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:AB040747 IPI:IPI00575589 UniGene:Gga.1914
            ProteinModelPortal:Q9I920 STRING:Q9I920 PRIDE:Q9I920
            HOGENOM:HOG000095239 HOVERGEN:HBG004850 InParanoid:Q9I920
            OrthoDB:EOG4640B3 GO:GO:0000729 Uniprot:Q9I920
        Length = 1142

 Score = 265 (98.3 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 57/133 (42%), Positives = 85/133 (63%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VR+VIH  L KS+E +Y ESGRAGRDG+++HC+L+Y   DV +L  ++
Sbjct:   676 TIAFGMGIDKPDVRYVIHASLPKSVEGYYHESGRAGRDGEMSHCLLFYSYSDVTRLRRLI 735

Query:   175 F---D-----QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEA-WSDTECRG----MCDH 221
                 D     +QT   NLY++V YC +   CRR  + +YF E  ++   C+     +CD+
Sbjct:   736 LMEKDGNSHTRQTHFNNLYSMVHYCENVVDCRRIQLLAYFGETDFNPNFCKDHPEVICDN 795

Query:   222 CRGGRRDAKRVDV 234
             C   ++D K  +V
Sbjct:   796 C-STKKDYKSRNV 807

 Score = 76 (31.8 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
 Identities = 31/113 (27%), Positives = 49/113 (43%)

Query:    11 LNLWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSK------SME-NFYQVR--IKPAAQKD 61
             LN+ R  F+ V +        P V+  I + L        +M  N + ++  + P   K 
Sbjct:   544 LNMLRKKFHSVPMMALTATANPRVQKDIQNQLEMLKPQVFTMSFNRHNLKYDVLPKKPKK 603

Query:    62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL-ESN 113
                +  + + +   + SGIIY  S  EC+     L+  GL   AYHA L +SN
Sbjct:   604 VAMDCLEWIKKYHPHDSGIIYCLSRHECDTTAAILQKEGLAALAYHAGLTDSN 656


>TAIR|locus:2074429 [details] [associations]
            symbol:RECQI1 "RECQ helicase l1" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0042631 "cellular response to water deprivation" evidence=IEP]
            [GO:0070417 "cellular response to cold" evidence=IEP] [GO:0006261
            "DNA-dependent DNA replication" evidence=RCA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            GO:GO:0070417 GO:GO:0042631 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 EMBL:AC012393 eggNOG:COG0514 KO:K10901
            TIGRFAMs:TIGR00614 GO:GO:0008026 HSSP:P15043 HOGENOM:HOG000044388
            EMBL:AJ404470 IPI:IPI00524157 RefSeq:NP_187225.2 UniGene:At.10170
            UniGene:At.49591 ProteinModelPortal:Q9FT74 SMR:Q9FT74
            EnsemblPlants:AT3G05740.1 GeneID:819743 KEGG:ath:AT3G05740
            TAIR:At3g05740 InParanoid:Q9FT74 OMA:RFVIHNT PhylomeDB:Q9FT74
            ProtClustDB:CLSN2690733 Genevestigator:Q9FT74 Uniprot:Q9FT74
        Length = 606

 Score = 233 (87.1 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
 Identities = 50/119 (42%), Positives = 73/119 (61%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK +VRFVIH+ LSK++E++YQESGRAGRDG  A CI  Y+  D  ++  M+
Sbjct:   485 TIAFGMGIDKADVRFVIHNTLSKAVESYYQESGRAGRDGLQAQCICLYQKKDFSRVVCML 544

Query:   175 FDQQ--------TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM---CDHC 222
              + Q        + +A    +  YC  +T CRR ++  YF E++    C+     CD+C
Sbjct:   545 RNGQGRNMDRFKSAMAQAKKMQQYCELKTECRRQMLLEYFGESFDRMICKSSLNPCDNC 603

 Score = 115 (45.5 bits), Expect = 0.00051, P = 0.00051
 Identities = 22/41 (53%), Positives = 33/41 (80%)

Query:    14 WRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             W+T   ++   +IAFG+GIDK +VRFVIH+ LSK++E++YQ
Sbjct:   474 WQTGEVRIVCATIAFGMGIDKADVRFVIHNTLSKAVESYYQ 514

 Score = 92 (37.4 bits), Expect = 7.7e-26, Sum P(2) = 7.7e-26
 Identities = 22/60 (36%), Positives = 36/60 (60%)

Query:    50 YQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR-GLRVSAYHA 108
             Y+V +K    K+ L +L +L+  RF++QSGI+Y  S  EC D+ + L  +  ++   YHA
Sbjct:   404 YEVIVKT---KEPLKQLQELLRDRFKDQSGIVYCLSKSECVDVAKFLNEKCKVKTVYYHA 460


>MGI|MGI:1328362 [details] [associations]
            symbol:Blm "Bloom syndrome, RecQ helicase-like"
            species:10090 "Mus musculus" [GO:0000079 "regulation of
            cyclin-dependent protein serine/threonine kinase activity"
            evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000723
            "telomere maintenance" evidence=IGI] [GO:0000729 "DNA double-strand
            break processing" evidence=ISO] [GO:0000733 "DNA strand
            renaturation" evidence=ISO] [GO:0000800 "lateral element"
            evidence=ISO] [GO:0001673 "male germ cell nucleus" evidence=IDA]
            [GO:0002039 "p53 binding" evidence=ISO] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=ISO] [GO:0003824
            "catalytic activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA
            helicase activity" evidence=ISO] [GO:0004386 "helicase activity"
            evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=ISO] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005657
            "replication fork" evidence=IDA] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
            "ATP catabolic process" evidence=ISO;IDA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IDA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0006974 "response
            to DNA damage stimulus" evidence=ISO] [GO:0008026 "ATP-dependent
            helicase activity" evidence=ISO] [GO:0009378 "four-way junction
            helicase activity" evidence=ISO] [GO:0010165 "response to X-ray"
            evidence=ISO] [GO:0016363 "nuclear matrix" evidence=ISO]
            [GO:0016605 "PML body" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
            acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0031297
            "replication fork processing" evidence=ISO] [GO:0036310 "annealing
            helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent 3'-5'
            DNA helicase activity" evidence=IDA] [GO:0044237 "cellular
            metabolic process" evidence=IEA] [GO:0045120 "pronucleus"
            evidence=IDA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=ISO] [GO:0045910 "negative regulation of
            DNA recombination" evidence=ISO] [GO:0045950 "negative regulation
            of mitotic recombination" evidence=IMP] [GO:0046632 "alpha-beta T
            cell differentiation" evidence=IMP] [GO:0046641 "positive
            regulation of alpha-beta T cell proliferation" evidence=IMP]
            [GO:0051098 "regulation of binding" evidence=IDA] [GO:0051259
            "protein oligomerization" evidence=ISO] [GO:0051276 "chromosome
            organization" evidence=IMP] [GO:0051782 "negative regulation of
            cell division" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012532 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF08072 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00490 SMART:SM00956 MGI:MGI:1328362 GO:GO:0005524
            GO:GO:0005737 GO:GO:0005654 GO:GO:0003677 GO:GO:0006260
            Gene3D:1.10.10.10 InterPro:IPR011991 Reactome:REACT_120463
            GO:GO:0006310 GO:GO:0001673 GO:GO:0046632 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
            Reactome:REACT_27235 GO:GO:0005657 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 HOGENOM:HOG000095239
            HOVERGEN:HBG004850 OrthoDB:EOG4640B3 GO:GO:0000729 ChiTaRS:BLM
            CTD:641 GO:GO:0045120 GO:GO:0045950 GO:GO:0046641 GO:GO:0051098
            EMBL:Z98263 EMBL:AB008674 IPI:IPI00329943 RefSeq:NP_001035992.1
            RefSeq:NP_031576.4 UniGene:Mm.12932 ProteinModelPortal:O88700
            SMR:O88700 DIP:DIP-27643N STRING:O88700 PhosphoSite:O88700
            PRIDE:O88700 DNASU:12144 Ensembl:ENSMUST00000081314 GeneID:12144
            KEGG:mmu:12144 UCSC:uc009iaw.2 InParanoid:O88700 NextBio:280473
            Bgee:O88700 CleanEx:MM_BLM Genevestigator:O88700
            GermOnline:ENSMUSG00000030528 Uniprot:O88700
        Length = 1416

 Score = 290 (107.1 bits), Expect = 4.2e-24, P = 4.2e-24
 Identities = 69/190 (36%), Positives = 109/190 (57%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++++C D +AD + R     + + Y   + +    R+E++++ +             +IA
Sbjct:   905 SRREC-DTMADTLQRE--GLAALAYHAGLSD--SARDEVQHKWINQDNCQVIC---ATIA 956

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
             FG+GIDKP+VRFVIH  L KSME +YQESGRAGRDG+I+HC+L+Y   DV +L  ++  +
Sbjct:   957 FGMGIDKPDVRFVIHASLPKSMEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLIMME 1016

Query:   178 QTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRGM----CDHCRG 224
             + G        + NLY++V YC + T CRR  + +YF E   + + C+      CD+C  
Sbjct:  1017 KDGNYHTKETHVNNLYSMVHYCENITECRRIQLLAYFGEKGFNPDFCKKYPDVSCDNCCK 1076

Query:   225 GRRDAKRVDV 234
               +D K  DV
Sbjct:  1077 -TKDYKTKDV 1085

 Score = 117 (46.2 bits), Expect = 0.00083, P = 0.00083
 Identities = 22/30 (73%), Positives = 26/30 (86%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             +IAFG+GIDKP+VRFVIH  L KSME +YQ
Sbjct:   954 TIAFGMGIDKPDVRFVIHASLPKSMEGYYQ 983


>ZFIN|ZDB-GENE-070702-5 [details] [associations]
            symbol:blm "Bloom syndrome" species:7955 "Danio
            rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
            [GO:0006260 "DNA replication" evidence=IEA] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0016818 "hydrolase activity,
            acting on acid anhydrides, in phosphorus-containing anhydrides"
            evidence=IEA] [GO:0044237 "cellular metabolic process"
            evidence=IEA] [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0045950 "negative
            regulation of mitotic recombination" evidence=IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012532
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            ZFIN:ZDB-GENE-070702-5 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
            GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006310 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0045950 EMBL:CABZ01019975
            EMBL:CABZ01036951 EMBL:CABZ01036952 EMBL:CABZ01036953
            EMBL:CABZ01036954 EMBL:CABZ01036955 EMBL:CABZ01036956
            EMBL:CABZ01036957 EMBL:CABZ01036958 EMBL:CABZ01036959
            EMBL:CABZ01036960 EMBL:CABZ01036961 EMBL:CABZ01036962
            EMBL:CABZ01036963 EMBL:CABZ01036964 EMBL:CABZ01039756 EMBL:CR450750
            IPI:IPI00934934 Ensembl:ENSDART00000110746 Uniprot:E7EZY7
        Length = 1420

 Score = 282 (104.3 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
 Identities = 65/178 (36%), Positives = 104/178 (58%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++ DC D LAD + R     + + Y   + + +  RE ++N+ +             +IA
Sbjct:   889 SRNDC-DTLADSLQRA--GIAALAYHAGLSDSD--REYVQNKWINQDGCQVMC---ATIA 940

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF-- 175
             FG+GIDKP+VR+VIH  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV ++  ++   
Sbjct:   941 FGMGIDKPDVRYVIHASLPKSVEGYYQESGRAGRDGEISHCVLFYSYSDVIRIKRLIAMD 1000

Query:   176 ---DQQ---TGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRG----MCDHC 222
                +QQ   T + NL+++V +C +   CRR  + +YF E   +T  C+     +CD+C
Sbjct:  1001 KDGNQQSKATHINNLHSMVHFCENVAECRRIQLLAYFGEHTFNTSFCKEHPEVICDNC 1058

 Score = 36 (17.7 bits), Expect = 5.1e-24, Sum P(2) = 5.1e-24
 Identities = 9/26 (34%), Positives = 11/26 (42%)

Query:   206 FDEAWSDTECRGMCDHCRGGRRDAKR 231
             +   WS +   G     RGG R A R
Sbjct:  1358 YSSNWSSSRGGGRGGGYRGGSRGAGR 1383


>UNIPROTKB|F1RMJ2 [details] [associations]
            symbol:BLM "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
            "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR018982 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 GO:GO:0043140 GeneTree:ENSGT00550000074520
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 EMBL:CT757491
            Ensembl:ENSSSCT00000002035 OMA:REMTENT Uniprot:F1RMJ2
        Length = 511

 Score = 261 (96.9 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
 Identities = 58/133 (43%), Positives = 82/133 (61%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+ C+L+Y   DV +L  ++
Sbjct:    43 TIAFGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISQCLLFYTYHDVTRLKRLI 102

Query:   175 FDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRGM----CDH 221
               ++ G          NLY++V YC +   CRR  + +YF E  ++   C+      CD+
Sbjct:   103 LMEKDGNHHTKETHFNNLYSMVHYCENIAECRRIQLLAYFGENEFNPNFCKKYPDVSCDN 162

Query:   222 CRGGRRDAKRVDV 234
             C    +D K  DV
Sbjct:   163 CCK-TKDYKTRDV 174

 Score = 38 (18.4 bits), Expect = 1.2e-23, Sum P(2) = 1.2e-23
 Identities = 8/22 (36%), Positives = 12/22 (54%)

Query:    92 LREELRNRGLRVSAYHAKLESN 113
             + + L+  GL   AYHA L  +
Sbjct:     1 MADTLQKDGLAALAYHAGLSDS 22


>TIGR_CMR|BA_2818 [details] [associations]
            symbol:BA_2818 "ATP-dependent DNA helicase RecQ"
            species:198094 "Bacillus anthracis str. Ames" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006268
            "DNA unwinding involved in replication" evidence=ISS] [GO:0006281
            "DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
            evidence=ISS] [GO:0009378 "four-way junction helicase activity"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR006293 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00490 SMART:SM00956 GO:GO:0005524 EMBL:AE016879
            EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
            GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0005622 GO:GO:0006310 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 TIGRFAMs:TIGR00614
            GO:GO:0009432 HSSP:P15043 HOGENOM:HOG000044388 KO:K03654
            TIGRFAMs:TIGR01389 OMA:YCLSRAK RefSeq:NP_845165.1
            RefSeq:YP_019461.1 RefSeq:YP_028886.1 ProteinModelPortal:Q81PI6
            DNASU:1085972 EnsemblBacteria:EBBACT00000011651
            EnsemblBacteria:EBBACT00000017455 EnsemblBacteria:EBBACT00000023670
            GeneID:1085972 GeneID:2814571 GeneID:2847794 KEGG:ban:BA_2818
            KEGG:bar:GBAA_2818 KEGG:bat:BAS2627 ProtClustDB:CLSK916814
            BioCyc:BANT260799:GJAJ-2691-MONOMER
            BioCyc:BANT261594:GJ7F-2786-MONOMER Uniprot:Q81PI6
        Length = 705

 Score = 224 (83.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
 Identities = 50/117 (42%), Positives = 70/117 (59%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD 176
             AFG+GIDK N+R+VIH+ L K+ME++YQE+GRAGRDG  + CIL Y   DV ++   + D
Sbjct:   288 AFGMGIDKSNIRYVIHYQLPKNMESYYQEAGRAGRDGLDSACILLYASQDV-QVQRFLID 346

Query:   177 QQTG-------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGR 226
             Q  G       L  L N+  YC  + +C ++ I  YF E   + +C G C +C   R
Sbjct:   347 QSIGESRFSNELEKLQNMTDYCHTE-QCLQSFILQYFGEEPKE-DC-GRCGNCTDNR 400

 Score = 82 (33.9 bits), Expect = 1.4e-23, Sum P(2) = 1.4e-23
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:    66 LADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             LAD + R+ + +SGIIY  + K  + L E+L   G+ VS YHA +  +
Sbjct:   220 LADYI-RQNQKESGIIYAATRKVVDQLYEDLMKAGVSVSKYHAGMSDH 266


>UNIPROTKB|H0YNU5 [details] [associations]
            symbol:BLM "Bloom syndrome protein" species:9606 "Homo
            sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR011545 InterPro:IPR012532 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0005737 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            TIGRFAMs:TIGR00614 HGNC:HGNC:1058 EMBL:AC021422 EMBL:AC124248
            ProteinModelPortal:H0YNU5 SMR:H0YNU5 Ensembl:ENST00000560509
            Bgee:H0YNU5 Uniprot:H0YNU5
        Length = 1286

 Score = 282 (104.3 bits), Expect = 2.6e-23, P = 2.6e-23
 Identities = 68/190 (35%), Positives = 107/190 (56%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++++C D +AD + R     + + Y   + +    R+E++ + +             +IA
Sbjct:   897 SRREC-DTMADTLQRD--GLAALAYHAGLSD--SARDEVQQKWINQDGCQVIC---ATIA 948

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
             FG+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV +L  ++  +
Sbjct:   949 FGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMME 1008

Query:   178 QTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHCRG 224
             + G          NLY++V YC + T CRR  + +YF E  ++   C+      CD+C  
Sbjct:  1009 KDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNCCK 1068

Query:   225 GRRDAKRVDV 234
               +D K  DV
Sbjct:  1069 -TKDYKTRDV 1077


>UNIPROTKB|E2RS76 [details] [associations]
            symbol:BLM "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0051880 "G-quadruplex DNA binding"
            evidence=IEA] [GO:0051782 "negative regulation of cell division"
            evidence=IEA] [GO:0051259 "protein oligomerization" evidence=IEA]
            [GO:0051098 "regulation of binding" evidence=IEA] [GO:0046641
            "positive regulation of alpha-beta T cell proliferation"
            evidence=IEA] [GO:0046632 "alpha-beta T cell differentiation"
            evidence=IEA] [GO:0045950 "negative regulation of mitotic
            recombination" evidence=IEA] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0045120
            "pronucleus" evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA
            helicase activity" evidence=IEA] [GO:0031297 "replication fork
            processing" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
            [GO:0016363 "nuclear matrix" evidence=IEA] [GO:0010165 "response to
            X-ray" evidence=IEA] [GO:0009378 "four-way junction helicase
            activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005657 "replication
            fork" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0003697 "single-stranded DNA binding" evidence=IEA] [GO:0002039
            "p53 binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
            evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
            [GO:0000781 "chromosome, telomeric region" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000723 "telomere maintenance" evidence=IEA] [GO:0000405
            "bubble DNA binding" evidence=IEA] [GO:0000079 "regulation of
            cyclin-dependent protein serine/threonine kinase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012532 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0051259 GO:GO:0005524 GO:GO:0005737
            GO:GO:0045893 GO:GO:0000079 GO:GO:0005730 GO:GO:0016605
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            GO:GO:0001673 GO:GO:0003697 GO:GO:0016363 GO:GO:0046632
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0000781 GO:GO:0000723 GO:GO:0005657
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000733 GO:GO:0000800 GO:GO:0045120
            GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0051782
            GO:GO:0045950 GO:GO:0046641 GO:GO:0051098 GO:GO:0031297
            EMBL:AAEX03002333 Ensembl:ENSCAFT00000019677 Uniprot:E2RS76
        Length = 1407

 Score = 282 (104.3 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 67/190 (35%), Positives = 109/190 (57%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++++C D +AD + +     + + Y   + +    R+E++++ +             +IA
Sbjct:   886 SRREC-DTMADTLQKD--GLAALAYHAGLSD--SARDEVQHKWINQDGCQVIC---ATIA 937

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
             FG+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV +L  ++  +
Sbjct:   938 FGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILME 997

Query:   178 QTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRGM----CDHCRG 224
             + G          NLY++V YC + T CRR  + +YF E+  + + C+      CD+C  
Sbjct:   998 KDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGESGFNPDFCKKYPDVSCDNCCK 1057

Query:   225 GRRDAKRVDV 234
               +D K  DV
Sbjct:  1058 -TKDYKTRDV 1066


>UNIPROTKB|P54132 [details] [associations]
            symbol:BLM "Bloom syndrome protein" species:9606 "Homo
            sapiens" [GO:0000723 "telomere maintenance" evidence=IEA]
            [GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0005657
            "replication fork" evidence=IEA] [GO:0043140 "ATP-dependent 3'-5'
            DNA helicase activity" evidence=IEA] [GO:0045120 "pronucleus"
            evidence=IEA] [GO:0045950 "negative regulation of mitotic
            recombination" evidence=IEA] [GO:0046632 "alpha-beta T cell
            differentiation" evidence=IEA] [GO:0046641 "positive regulation of
            alpha-beta T cell proliferation" evidence=IEA] [GO:0051098
            "regulation of binding" evidence=IEA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0031297
            "replication fork processing" evidence=IDA] [GO:0000781
            "chromosome, telomeric region" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0016605 "PML body" evidence=IDA]
            [GO:0048478 "replication fork protection" evidence=NAS] [GO:0000800
            "lateral element" evidence=IDA] [GO:0006310 "DNA recombination"
            evidence=NAS] [GO:0051259 "protein oligomerization" evidence=IDA]
            [GO:0003697 "single-stranded DNA binding" evidence=IDA] [GO:0006974
            "response to DNA damage stimulus" evidence=IMP] [GO:0008026
            "ATP-dependent helicase activity" evidence=IDA] [GO:0009378
            "four-way junction helicase activity" evidence=IDA] [GO:0000405
            "bubble DNA binding" evidence=IDA] [GO:0051880 "G-quadruplex DNA
            binding" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=IDA] [GO:0051782 "negative regulation of cell division"
            evidence=IMP] [GO:0000085 "G2 phase of mitotic cell cycle"
            evidence=NAS] [GO:0000724 "double-strand break repair via
            homologous recombination" evidence=NAS] [GO:0010165 "response to
            X-ray" evidence=IDA] [GO:0016363 "nuclear matrix" evidence=IDA]
            [GO:0031572 "G2 DNA damage checkpoint" evidence=NAS] [GO:0004386
            "helicase activity" evidence=IDA] [GO:0045910 "negative regulation
            of DNA recombination" evidence=IMP] [GO:0006281 "DNA repair"
            evidence=NAS] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=IMP;IDA] [GO:0036310 "annealing helicase activity"
            evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0016887
            "ATPase activity" evidence=IDA] [GO:0000079 "regulation of
            cyclin-dependent protein serine/threonine kinase activity"
            evidence=IMP] [GO:0000729 "DNA double-strand break processing"
            evidence=IDA] [GO:0000733 "DNA strand renaturation" evidence=IDA]
            [GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012532 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF08072 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00490 SMART:SM00956 GO:GO:0051259 GO:GO:0005524
            GO:GO:0005737 Pathway_Interaction_DB:telomerasepathway
            GO:GO:0045893 GO:GO:0000079 GO:GO:0005730 GO:GO:0016605
            GO:GO:0000085 Gene3D:1.10.10.10 InterPro:IPR011991
            Reactome:REACT_111183 GO:GO:0001673 GO:GO:0003697 GO:GO:0004003
            GO:GO:0000724 GO:GO:0016363 GO:GO:0046632 GO:GO:0010165
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GO:GO:0000723 GO:GO:0031572 GO:GO:0005657 eggNOG:COG0514 KO:K10901
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614
            HOGENOM:HOG000095239 HOVERGEN:HBG004850 OrthoDB:EOG4640B3
            GO:GO:0000729 EMBL:U39817 EMBL:AY886902 EMBL:BC093622 EMBL:BC101567
            EMBL:BC115030 EMBL:BC115032 IPI:IPI00004859 PIR:A57570
            RefSeq:NP_000048.1 UniGene:Hs.725208 PDB:2KV2 PDB:2RRD PDBsum:2KV2
            PDBsum:2RRD ProteinModelPortal:P54132 SMR:P54132 DIP:DIP-33322N
            IntAct:P54132 MINT:MINT-131918 STRING:P54132 PhosphoSite:P54132
            DMDM:1705486 PaxDb:P54132 PRIDE:P54132 Ensembl:ENST00000355112
            GeneID:641 KEGG:hsa:641 UCSC:uc002bpr.3 CTD:641
            GeneCards:GC15P091260 HGNC:HGNC:1058 HPA:HPA005689 MIM:210900
            MIM:604610 neXtProt:NX_P54132 Orphanet:125 PharmGKB:PA25369
            InParanoid:P54132 OMA:NANDQAI ChEMBL:CHEMBL1293237
            EvolutionaryTrace:P54132 GenomeRNAi:641 NextBio:2600
            PMAP-CutDB:P54132 ArrayExpress:P54132 Bgee:P54132 CleanEx:HS_BLM
            Genevestigator:P54132 GermOnline:ENSG00000197299 GO:GO:0000800
            GO:GO:0045120 GO:GO:0036310 GO:GO:0000405 GO:GO:0009378
            GO:GO:0051880 GO:GO:0051782 GO:GO:0045910 GO:GO:0045950
            GO:GO:0046641 GO:GO:0051098 GO:GO:0031297 GO:GO:0048478
            Uniprot:P54132
        Length = 1417

 Score = 282 (104.3 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 68/190 (35%), Positives = 107/190 (56%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++++C D +AD + R     + + Y   + +    R+E++ + +             +IA
Sbjct:   897 SRREC-DTMADTLQRD--GLAALAYHAGLSD--SARDEVQQKWINQDGCQVIC---ATIA 948

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
             FG+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV +L  ++  +
Sbjct:   949 FGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLIMME 1008

Query:   178 QTG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRG----MCDHCRG 224
             + G          NLY++V YC + T CRR  + +YF E  ++   C+      CD+C  
Sbjct:  1009 KDGNHHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENGFNPDFCKKHPDVSCDNCCK 1068

Query:   225 GRRDAKRVDV 234
               +D K  DV
Sbjct:  1069 -TKDYKTRDV 1077


>UNIPROTKB|J9PB86 [details] [associations]
            symbol:BLM "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012532
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 CTD:641 OMA:NANDQAI
            EMBL:AAEX03002333 RefSeq:XP_003434427.1 Ensembl:ENSCAFT00000042800
            GeneID:100685609 KEGG:cfa:100685609 Uniprot:J9PB86
        Length = 1420

 Score = 282 (104.3 bits), Expect = 3.0e-23, P = 3.0e-23
 Identities = 67/190 (35%), Positives = 109/190 (57%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++++C D +AD + +     + + Y   + +    R+E++++ +             +IA
Sbjct:   899 SRREC-DTMADTLQKD--GLAALAYHAGLSD--SARDEVQHKWINQDGCQVIC---ATIA 950

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQ 177
             FG+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV +L  ++  +
Sbjct:   951 FGMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCLLFYTYHDVTRLKRLILME 1010

Query:   178 QTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTE-CRGM----CDHCRG 224
             + G          NLY++V YC + T CRR  + +YF E+  + + C+      CD+C  
Sbjct:  1011 KDGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGESGFNPDFCKKYPDVSCDNCCK 1070

Query:   225 GRRDAKRVDV 234
               +D K  DV
Sbjct:  1071 -TKDYKTRDV 1079


>UNIPROTKB|E1BQ04 [details] [associations]
            symbol:BLM "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
            [GO:0051782 "negative regulation of cell division" evidence=IEA]
            [GO:0051259 "protein oligomerization" evidence=IEA] [GO:0051098
            "regulation of binding" evidence=IEA] [GO:0046641 "positive
            regulation of alpha-beta T cell proliferation" evidence=IEA]
            [GO:0046632 "alpha-beta T cell differentiation" evidence=IEA]
            [GO:0045950 "negative regulation of mitotic recombination"
            evidence=IEA] [GO:0045893 "positive regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0031297 "replication fork processing"
            evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0016363
            "nuclear matrix" evidence=IEA] [GO:0010165 "response to X-ray"
            evidence=IEA] [GO:0009378 "four-way junction helicase activity"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005730
            "nucleolus" evidence=IEA] [GO:0005657 "replication fork"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=IEA] [GO:0002039 "p53
            binding" evidence=IEA] [GO:0001673 "male germ cell nucleus"
            evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
            [GO:0000781 "chromosome, telomeric region" evidence=IEA]
            [GO:0000729 "DNA double-strand break processing" evidence=IEA]
            [GO:0000723 "telomere maintenance" evidence=IEA] [GO:0000405
            "bubble DNA binding" evidence=IEA] [GO:0000079 "regulation of
            cyclin-dependent protein serine/threonine kinase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012532 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF08072 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0051259 GO:GO:0005524 GO:GO:0005737
            GO:GO:0045893 GO:GO:0000079 GO:GO:0005730 GO:GO:0016605
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            GO:GO:0001673 GO:GO:0003697 GO:GO:0016363 GO:GO:0046632
            GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0000781 GO:GO:0000723 GO:GO:0005657
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000733 OMA:NANDQAI GO:GO:0000800
            GO:GO:0045120 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
            GO:GO:0051782 GO:GO:0045950 GO:GO:0046641 GO:GO:0051098
            GO:GO:0031297 EMBL:DAAA02052171 IPI:IPI01003766
            Ensembl:ENSBTAT00000027057 Uniprot:E1BQ04
        Length = 1417

 Score = 279 (103.3 bits), Expect = 6.3e-23, P = 6.3e-23
 Identities = 69/189 (36%), Positives = 104/189 (55%)

Query:    62 CLDEL-ADLMSRRFRNQ--SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIAF 118
             CL     D M+   +N   + + Y   + +    R+E++++ +             +IAF
Sbjct:   895 CLSRRECDTMAETLQNDGLAALAYHAGLSD--SARDEVQHKWINQDGCQVIC---ATIAF 949

Query:   119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQ 178
             G+GIDKP+VRFVIH  L KS+E +YQESGRAGRDG+I+HCIL+Y   DV +L  ++  ++
Sbjct:   950 GMGIDKPDVRFVIHASLPKSVEGYYQESGRAGRDGEISHCILFYTYHDVTRLKRLILMEK 1009

Query:   179 TG--------LANLYNIVSYCLDQTRCRRAIIASYFDE-AWSDTECRGM----CDHCRGG 225
              G          NLY++V YC + T CRR  + +YF E  ++   C+      CD+C   
Sbjct:  1010 DGNRHTRETHFNNLYSMVHYCENITECRRIQLLAYFGENEFNPHFCKKYPDVSCDNCYK- 1068

Query:   226 RRDAKRVDV 234
              +D K  DV
Sbjct:  1069 TKDFKTKDV 1077


>UNIPROTKB|P15043 [details] [associations]
            symbol:recQ species:83333 "Escherichia coli K-12"
            [GO:0046914 "transition metal ion binding" evidence=IDA]
            [GO:0016887 "ATPase activity" evidence=IDA] [GO:0008094
            "DNA-dependent ATPase activity" evidence=IDA] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0003677 "DNA binding"
            evidence=IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IMP]
            [GO:0017116 "single-stranded DNA-dependent ATP-dependent DNA
            helicase activity" evidence=IDA] [GO:0017117 "single-stranded
            DNA-dependent ATP-dependent DNA helicase complex" evidence=IDA]
            [GO:0006310 "DNA recombination" evidence=IEA;IDA;IMP] [GO:0006281
            "DNA repair" evidence=IEA;IGI] [GO:0006974 "response to DNA damage
            stimulus" evidence=IEA;IGI] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006200 "ATP
            catabolic process" evidence=IDA] [GO:0043590 "bacterial nucleoid"
            evidence=IDA] [GO:0030894 "replisome" evidence=IDA] [GO:0009432
            "SOS response" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR006293 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
            GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003677
            GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0046914
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            EMBL:M87049 eggNOG:COG0514 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0043590 GO:GO:0009432 GO:GO:0030894
            GO:GO:0017116 GO:GO:0017117 EMBL:M30198 HOGENOM:HOG000044388
            KO:K03654 TIGRFAMs:TIGR01389 RefSeq:YP_026263.3 RefSeq:YP_491620.1
            PDB:1OYW PDB:1OYY PDB:1WUD PDBsum:1OYW PDBsum:1OYY PDBsum:1WUD
            ProteinModelPortal:P15043 SMR:P15043 DIP:DIP-10656N IntAct:P15043
            MINT:MINT-1223947 EnsemblBacteria:EBESCT00000003276
            EnsemblBacteria:EBESCT00000015928 GeneID:12930625 GeneID:948318
            KEGG:ecj:Y75_p3356 KEGG:eco:b3822 PATRIC:32123145 EchoBASE:EB0826
            EcoGene:EG10833 OMA:YCLSRAK ProtClustDB:PRK11057
            BioCyc:EcoCyc:EG10833-MONOMER BioCyc:ECOL316407:JW5855-MONOMER
            BioCyc:MetaCyc:EG10833-MONOMER EvolutionaryTrace:P15043
            Genevestigator:P15043 Uniprot:P15043
        Length = 609

 Score = 198 (74.8 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
 Identities = 43/113 (38%), Positives = 69/113 (61%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GI+KPNVRFV+H  + +++E++YQE+GRAGRDG  A  +L+Y   D+  L   +
Sbjct:   293 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCL 352

Query:   175 FDQQTG-LANL----YNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              ++  G L ++     N +    +   CRR ++ +YF E   +  C G CD C
Sbjct:   353 EEKPQGQLQDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEP-C-GNCDIC 403

 Score = 100 (40.3 bits), Expect = 7.0e-23, Sum P(2) = 7.0e-23
 Identities = 22/52 (42%), Positives = 33/52 (63%)

Query:    63 LDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV 114
             LD+L   +  + R +SGIIY  S  + ED    L+++G+  +AYHA LE+NV
Sbjct:   224 LDQLMRYVQEQ-RGKSGIIYCNSRAKVEDTAARLQSKGISAAAYHAGLENNV 274


>UNIPROTKB|F1PAG8 [details] [associations]
            symbol:RECQL5 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0003676 "nucleic
            acid binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            CTD:9400 KO:K10902 InterPro:IPR010716 Pfam:PF06959 ProDom:PD120154
            OMA:DPKIEEF EMBL:AAEX03006295 RefSeq:XP_540436.2
            Ensembl:ENSCAFT00000007842 GeneID:483317 KEGG:cfa:483317
            Uniprot:F1PAG8
        Length = 989

 Score = 216 (81.1 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
 Identities = 52/133 (39%), Positives = 75/133 (56%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++
Sbjct:   313 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 372

Query:   175 ------FDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
                     ++ G        +     +V++C ++  CR A IA YF +A     C   CD
Sbjct:   373 RKEVAKLQEKRGNKASDKAAILAFDALVTFC-EELGCRHAAIAKYFGDA--PPACTKGCD 429

Query:   221 HCRGGRRDAKRVD 233
             HCR      KR+D
Sbjct:   430 HCRDPAALRKRLD 442

 Score = 87 (35.7 bits), Expect = 8.6e-23, Sum P(2) = 8.6e-23
 Identities = 24/72 (33%), Positives = 35/72 (48%)

Query:    49 FYQVRIK-----PAAQ-KD-CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
             FY V+ K     P    +D CL  L     +   +  GI+Y  + + CE L  EL  RG+
Sbjct:   222 FYDVQFKELLSDPYGNLRDFCLKALGQKADKGLLSGCGIVYCRTREACEQLATELSYRGV 281

Query:   102 RVSAYHAKLESN 113
                AYHA L+++
Sbjct:   282 NAKAYHAGLKAS 293


>UNIPROTKB|Q9KVF0 [details] [associations]
            symbol:VC_0196 "ATP-dependent DNA helicase RecQ"
            species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
            [GO:0006281 "DNA repair" evidence=ISS] [GO:0006310 "DNA
            recombination" evidence=ISS] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR006293 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0009432 HSSP:P15043 KO:K03654
            TIGRFAMs:TIGR01389 OMA:YCLSRAK ProtClustDB:PRK11057 PIR:E82351
            RefSeq:NP_229853.2 ProteinModelPortal:Q9KVF0 SMR:Q9KVF0
            DNASU:2614560 GeneID:2614560 KEGG:vch:VC0196 PATRIC:20079438
            Uniprot:Q9KVF0
        Length = 620

 Score = 200 (75.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 45/114 (39%), Positives = 70/114 (61%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GI+KPNVRFV+H  + +++E++YQE+GRAGRDG  A  ++ Y   D+  L  M+
Sbjct:   305 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML 364

Query:   175 FDQQTGLAN------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              ++  G         L  + ++   QT CRR ++ +YF E + D  C G CD C
Sbjct:   365 DEKPDGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGE-YRDKPC-GNCDIC 415

 Score = 75 (31.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query:    75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             R Q GIIY  S K+ E L E+L    +R ++YHA ++++
Sbjct:   247 RGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDAD 285

 Score = 36 (17.7 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query:    27 LG-IDKPNVRFVI 38
             LG  D+PN+R+++
Sbjct:   217 LGSFDRPNIRYML 229


>TIGR_CMR|VC_0196 [details] [associations]
            symbol:VC_0196 "ATP-dependent DNA helicase RecQ"
            species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006281
            "DNA repair" evidence=ISS] [GO:0006310 "DNA recombination"
            evidence=ISS] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR006293 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0006260 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 GO:GO:0004003 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0009432 HSSP:P15043 KO:K03654
            TIGRFAMs:TIGR01389 OMA:YCLSRAK ProtClustDB:PRK11057 PIR:E82351
            RefSeq:NP_229853.2 ProteinModelPortal:Q9KVF0 SMR:Q9KVF0
            DNASU:2614560 GeneID:2614560 KEGG:vch:VC0196 PATRIC:20079438
            Uniprot:Q9KVF0
        Length = 620

 Score = 200 (75.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 45/114 (39%), Positives = 70/114 (61%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GI+KPNVRFV+H  + +++E++YQE+GRAGRDG  A  ++ Y   D+  L  M+
Sbjct:   305 TVAFGMGINKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMMLYDPADMNWLRRML 364

Query:   175 FDQQTGLAN------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              ++  G         L  + ++   QT CRR ++ +YF E + D  C G CD C
Sbjct:   365 DEKPDGAQKQVESHKLTAMGAFAEAQT-CRRQVLLNYFGE-YRDKPC-GNCDIC 415

 Score = 75 (31.5 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 16/39 (41%), Positives = 25/39 (64%)

Query:    75 RNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             R Q GIIY  S K+ E L E+L    +R ++YHA ++++
Sbjct:   247 RGQCGIIYCGSRKKVEMLTEKLCGNHIRAASYHAGMDAD 285

 Score = 36 (17.7 bits), Expect = 2.6e-22, Sum P(3) = 2.6e-22
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query:    27 LG-IDKPNVRFVI 38
             LG  D+PN+R+++
Sbjct:   217 LGSFDRPNIRYML 229


>UNIPROTKB|J3KTQ2 [details] [associations]
            symbol:RECQL5 "ATP-dependent DNA helicase Q5" species:9606
            "Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 TIGRFAMs:TIGR00614
            GO:GO:0008026 EMBL:AC087749 HGNC:HGNC:9950 ChiTaRS:RECQL5
            Ensembl:ENST00000578201 Uniprot:J3KTQ2
        Length = 480

 Score = 207 (77.9 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
 Identities = 51/133 (38%), Positives = 74/133 (55%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD-------- 166
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D        
Sbjct:   316 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 375

Query:   167 ---VFKLSSMVFDQQTGLANLYN---IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
                V KL     ++ +  A +     +V++C ++  CR A IA YF +A     C   CD
Sbjct:   376 RKEVAKLQEKRGNKASDKATIMAFDALVTFC-EELGCRHAAIAKYFGDALP--ACAKGCD 432

Query:   221 HCRGGRRDAKRVD 233
             HC+      +R++
Sbjct:   433 HCQNPTAVRRRLE 445

 Score = 81 (33.6 bits), Expect = 2.7e-22, Sum P(2) = 2.7e-22
 Identities = 31/101 (30%), Positives = 44/101 (43%)

Query:    20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-----PAAQ-KD-CLDELADLMSR 72
             Q  +   L + KP   F    C   ++  FY V+ K     P    KD CL  L     +
Sbjct:   200 QEDVFAALHLKKPVAIFKTP-CFRANL--FYDVQFKELISDPYGNLKDFCLKALGQEADK 256

Query:    73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
                   GI+Y  + + CE L  EL  RG+   AYHA L+++
Sbjct:   257 GLSG-CGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKAS 296


>WB|WBGene00001865 [details] [associations]
            symbol:him-6 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0006260 "DNA replication"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0051307 "meiotic chromosome separation" evidence=IMP]
            [GO:0051276 "chromosome organization" evidence=IGI] [GO:0007059
            "chromosome segregation" evidence=IGI] [GO:0007126 "meiosis"
            evidence=IGI] [GO:0007067 "mitosis" evidence=IGI] [GO:0007131
            "reciprocal meiotic recombination" evidence=IMP] [GO:0000077 "DNA
            damage checkpoint" evidence=IMP] [GO:0010165 "response to X-ray"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0043066 "negative regulation of apoptotic
            process" evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0005634 GO:GO:0008340 GO:GO:0000077 GO:GO:0043066
            GO:GO:0007067 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0010165 GO:GO:0051276
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GO:GO:0007131 EMBL:AY095296 EMBL:Z83123 PIR:T24415
            RefSeq:NP_502390.2 UniGene:Cel.5990 ProteinModelPortal:O18017
            SMR:O18017 IntAct:O18017 MINT:MINT-227232 STRING:O18017
            PaxDb:O18017 EnsemblMetazoa:T04A11.6 GeneID:178201
            KEGG:cel:CELE_T04A11.6 UCSC:T04A11.6.1 CTD:178201 WormBase:T04A11.6
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 HOGENOM:HOG000022124
            InParanoid:O18017 KO:K10901 OMA:PEDANDS NextBio:900142
            GO:GO:0051307 Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614
            Uniprot:O18017
        Length = 988

 Score = 269 (99.8 bits), Expect = 4.3e-22, P = 4.3e-22
 Identities = 58/150 (38%), Positives = 89/150 (59%)

Query:    98 NRGLRVSAYHAKLESN-----VSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
             N  LRVS   + + +       +IAFG+GIDKP+VRFVIH+ L KS+E +YQE+GRAGRD
Sbjct:   504 NDNLRVSVQRSWIANKFDVICATIAFGMGIDKPDVRFVIHYSLPKSIEGYYQETGRAGRD 563

Query:   153 GQIAHCILYYRLPDVFKLSSMVFDQQT--G-----LANLYNIVSYCLDQTRCRRAIIASY 205
             G  ++C++ Y   D  +L  M+ +  T  G     L N+  +V+YC + + CRR ++  +
Sbjct:   564 GMPSYCLMLYSYHDSIRLRRMIEEGNTTTGVRSMHLNNVLQVVAYCENVSVCRRKMLVEH 623

Query:   206 FDEAWSDTECRGM---CDHCRGGRRDAKRV 232
             F E + +  CR     CD C   R++A+ +
Sbjct:   624 FGEVYDEQSCRNSKTPCDICERQRKNAEAI 653

 Score = 117 (46.2 bits), Expect = 0.00055, P = 0.00055
 Identities = 21/30 (70%), Positives = 27/30 (90%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             +IAFG+GIDKP+VRFVIH+ L KS+E +YQ
Sbjct:   526 TIAFGMGIDKPDVRFVIHYSLPKSIEGYYQ 555


>TAIR|locus:2127998 [details] [associations]
            symbol:RecQl3 "AT4G35740" species:3702 "Arabidopsis
            thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
            activity" evidence=ISS;IDA] [GO:0008152 "metabolic process"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IDA]
            [GO:0009378 "four-way junction helicase activity" evidence=IDA]
            [GO:0036310 "annealing helicase activity" evidence=IDA] [GO:0043138
            "3'-5' DNA helicase activity" evidence=IDA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0046872
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            EMBL:AL161588 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            eggNOG:COG0514 KO:K10901 TIGRFAMs:TIGR00614 GO:GO:0036310
            GO:GO:0009378 GO:GO:0008026 EMBL:AL031135 GO:GO:0043138 PIR:T04679
            HSSP:P15043 EMBL:AJ404472 EMBL:AK229155 IPI:IPI00541767
            IPI:IPI00545081 RefSeq:NP_195299.2 RefSeq:NP_849500.1
            UniGene:At.20216 ProteinModelPortal:Q9FT72 SMR:Q9FT72 IntAct:Q9FT72
            PaxDb:Q9FT72 PRIDE:Q9FT72 EnsemblPlants:AT4G35740.1 GeneID:829727
            KEGG:ath:AT4G35740 TAIR:At4g35740 HOGENOM:HOG000239549
            InParanoid:Q9FT72 OMA:YEVRYKD PhylomeDB:Q9FT72
            ProtClustDB:CLSN2680292 Genevestigator:Q9FT72 Uniprot:Q9FT72
        Length = 713

 Score = 203 (76.5 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 45/117 (38%), Positives = 68/117 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDK +VR V H  + KSME+FYQESGRAGRD   +  +LYY + D  K+  ++
Sbjct:   313 TVAFGMGIDKKDVRMVCHFNIPKSMESFYQESGRAGRDQLPSRSVLYYGVDDRKKMEYLL 372

Query:   175 FDQQTG--------LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
              + +           ++   IV+YC + + CRR  I   F E +   +C+  CD C+
Sbjct:   373 RNSENKKSSSSKKPTSDFEQIVTYC-EGSGCRRKKILESFGEEFPVQQCKKTCDACK 428

 Score = 83 (34.3 bits), Expect = 2.0e-21, Sum P(2) = 2.0e-21
 Identities = 29/87 (33%), Positives = 41/87 (47%)

Query:    29 IDKPNVRFVIHHCLSKSMEN-FYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIK 87
             ID  N+R  +    S +  N FY+VR K        D L +L+ +   N   IIY     
Sbjct:   210 IDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLDNAYTD-LGNLL-KSCGNICAIIYCLERT 267

Query:    88 ECEDLREELRNRGLRVSAYHAKLESNV 114
              C+DL   L + G+  +AYHA L S +
Sbjct:   268 TCDDLSVHLSSIGISSAAYHAGLNSKM 294

 Score = 39 (18.8 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query:    56 PAAQKDCLDELA---DLMSRRFRNQSGIIYTTSIKECED 91
             P  QKD +D L     L+ +   N+  I Y    K+  D
Sbjct:   203 PKVQKDVIDSLNLRNPLVLKSSFNRPNIFYEVRYKDLLD 241


>UNIPROTKB|Q6P4G0 [details] [associations]
            symbol:RECQL5 "ATP-dependent DNA helicase Q5" species:9606
            "Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            EMBL:CH471099 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            TIGRFAMs:TIGR00614 GO:GO:0008026 EMBL:AC087749 HOGENOM:HOG000044388
            IPI:IPI01015246 UniGene:Hs.632229 HGNC:HGNC:9950 HOVERGEN:HBG057065
            ChiTaRS:RECQL5 InterPro:IPR010716 Pfam:PF06959 ProDom:PD120154
            EMBL:BC063440 IPI:IPI00185769 ProteinModelPortal:Q6P4G0
            STRING:Q6P4G0 PRIDE:Q6P4G0 Ensembl:ENST00000423245 UCSC:uc010dgk.3
            ArrayExpress:Q6P4G0 Bgee:Q6P4G0 Uniprot:Q6P4G0
        Length = 964

 Score = 207 (77.9 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
 Identities = 51/133 (38%), Positives = 74/133 (55%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD-------- 166
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D        
Sbjct:   289 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 348

Query:   167 ---VFKLSSMVFDQQTGLANLYN---IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
                V KL     ++ +  A +     +V++C ++  CR A IA YF +A     C   CD
Sbjct:   349 RKEVAKLQEKRGNKASDKATIMAFDALVTFC-EELGCRHAAIAKYFGDALP--ACAKGCD 405

Query:   221 HCRGGRRDAKRVD 233
             HC+      +R++
Sbjct:   406 HCQNPTAVRRRLE 418

 Score = 81 (33.6 bits), Expect = 3.0e-21, Sum P(2) = 3.0e-21
 Identities = 31/101 (30%), Positives = 44/101 (43%)

Query:    20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-----PAAQ-KD-CLDELADLMSR 72
             Q  +   L + KP   F    C   ++  FY V+ K     P    KD CL  L     +
Sbjct:   173 QEDVFAALHLKKPVAIFKTP-CFRANL--FYDVQFKELISDPYGNLKDFCLKALGQEADK 229

Query:    73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
                   GI+Y  + + CE L  EL  RG+   AYHA L+++
Sbjct:   230 GLSG-CGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKAS 269


>UNIPROTKB|O94762 [details] [associations]
            symbol:RECQL5 "ATP-dependent DNA helicase Q5" species:9606
            "Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
            evidence=NAS] [GO:0005654 "nucleoplasm" evidence=NAS] [GO:0005737
            "cytoplasm" evidence=IDA;NAS] [GO:0006259 "DNA metabolic process"
            evidence=NAS] [GO:0016591 "DNA-directed RNA polymerase II,
            holoenzyme" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
            [GO:0032508 "DNA duplex unwinding" evidence=NAS;TAS] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            [GO:0031965 "nuclear membrane" evidence=IDA] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
            GO:GO:0006281 GO:GO:0031965 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006310 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0003678 GO:GO:0016591 eggNOG:COG0514
            TIGRFAMs:TIGR00614 GO:GO:0008026 EMBL:AB006533 EMBL:AF135183
            EMBL:AB042823 EMBL:AB042824 EMBL:AB042825 EMBL:BC016911
            EMBL:AL136869 IPI:IPI00220819 IPI:IPI00220820 IPI:IPI01015246
            RefSeq:NP_001003715.1 RefSeq:NP_001003716.1 RefSeq:NP_004250.4
            UniGene:Hs.632229 ProteinModelPortal:O94762 SMR:O94762
            DIP:DIP-32964N IntAct:O94762 MINT:MINT-1378331 STRING:O94762
            PhosphoSite:O94762 PaxDb:O94762 PRIDE:O94762
            Ensembl:ENST00000317905 Ensembl:ENST00000340830
            Ensembl:ENST00000420326 Ensembl:ENST00000584999 GeneID:9400
            KEGG:hsa:9400 UCSC:uc002joz.4 UCSC:uc002jpb.2 UCSC:uc010dgl.3
            CTD:9400 GeneCards:GC17M073622 HGNC:HGNC:9950 HPA:HPA029970
            HPA:HPA029971 MIM:603781 neXtProt:NX_O94762 PharmGKB:PA34317
            HOGENOM:HOG000206773 HOVERGEN:HBG057065 InParanoid:O94762 KO:K10902
            OrthoDB:EOG46WZ7X PhylomeDB:O94762 ChiTaRS:RECQL5 GenomeRNAi:9400
            NextBio:35211 ArrayExpress:O94762 Bgee:O94762 CleanEx:HS_RECQL5
            Genevestigator:O94762 GermOnline:ENSG00000108469 InterPro:IPR010716
            Pfam:PF06959 ProDom:PD120154 Uniprot:O94762
        Length = 991

 Score = 207 (77.9 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
 Identities = 51/133 (38%), Positives = 74/133 (55%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD-------- 166
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D        
Sbjct:   316 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 375

Query:   167 ---VFKLSSMVFDQQTGLANLYN---IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
                V KL     ++ +  A +     +V++C ++  CR A IA YF +A     C   CD
Sbjct:   376 RKEVAKLQEKRGNKASDKATIMAFDALVTFC-EELGCRHAAIAKYFGDALP--ACAKGCD 432

Query:   221 HCRGGRRDAKRVD 233
             HC+      +R++
Sbjct:   433 HCQNPTAVRRRLE 445

 Score = 81 (33.6 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
 Identities = 31/101 (30%), Positives = 44/101 (43%)

Query:    20 QVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQVRIK-----PAAQ-KD-CLDELADLMSR 72
             Q  +   L + KP   F    C   ++  FY V+ K     P    KD CL  L     +
Sbjct:   200 QEDVFAALHLKKPVAIFKTP-CFRANL--FYDVQFKELISDPYGNLKDFCLKALGQEADK 256

Query:    73 RFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
                   GI+Y  + + CE L  EL  RG+   AYHA L+++
Sbjct:   257 GLSG-CGIVYCRTREACEQLAIELSCRGVNAKAYHAGLKAS 296


>TAIR|locus:2197394 [details] [associations]
            symbol:RECQ4A species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA;IMP] [GO:0006310 "DNA
            recombination" evidence=IEA;IMP] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;ISS] [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=IEA] [GO:0070417 "cellular
            response to cold" evidence=IEP] [GO:0071215 "cellular response to
            abscisic acid stimulus" evidence=IEP] [GO:0000723 "telomere
            maintenance" evidence=IMP] [GO:0000724 "double-strand break repair
            via homologous recombination" evidence=IGI;RCA;IMP] [GO:0006974
            "response to DNA damage stimulus" evidence=IGI;IMP] [GO:0043138
            "3'-5' DNA helicase activity" evidence=IMP;IDA] [GO:0051276
            "chromosome organization" evidence=IMP] [GO:0009506 "plasmodesma"
            evidence=IDA] [GO:0010228 "vegetative to reproductive phase
            transition of meristem" evidence=RCA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00490 SMART:SM00956
            Prosite:PS00018 EMBL:CP002684 GenomeReviews:CT485782_GR
            GO:GO:0009506 GO:GO:0005524 GO:GO:0005634 GO:GO:0046872
            GO:GO:0006260 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0000724 EMBL:U95973 GO:GO:0071215 GO:GO:0070417 GO:GO:0051276
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 KO:K10901 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0043138 HSSP:P15043 EMBL:AJ404473
            EMBL:AY120761 EMBL:BT010133 IPI:IPI00538289 PIR:B86243
            RefSeq:NP_172562.2 UniGene:At.10177 ProteinModelPortal:Q8L840
            SMR:Q8L840 STRING:Q8L840 PaxDb:Q8L840 PRIDE:Q8L840
            EnsemblPlants:AT1G10930.1 GeneID:837636 KEGG:ath:AT1G10930
            TAIR:At1g10930 HOGENOM:HOG000148634 InParanoid:Q8L840 OMA:QLPALIC
            PhylomeDB:Q8L840 ProtClustDB:PLN03137 Genevestigator:Q8L840
            Uniprot:Q8L840
        Length = 1188

 Score = 204 (76.9 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
 Identities = 48/117 (41%), Positives = 71/117 (60%)

Query:   108 AKLESNV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRL 164
             +K E N+   ++AFG+GI+KP+VRFVIHH L KS+E ++QE GRAGRDGQ + C+LYY  
Sbjct:   720 SKDEINIICATVAFGMGINKPDVRFVIHHSLPKSIEGYHQECGRAGRDGQRSSCVLYYGY 779

Query:   165 PDVFKLSSMVFD---QQTGLANLYNIVSYC--LDQTRCRRAIIASYFDEAWSDTECR 216
              D  ++  M+      Q+ +A  YN V+    L +T     +    + E  ++ ECR
Sbjct:   780 GDYIRVKHMISQGGVDQSPMATGYNRVASSGRLLETNTENLLRMVRYCE--NEVECR 834

 Score = 112 (44.5 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 19/30 (63%), Positives = 27/30 (90%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             ++AFG+GI+KP+VRFVIHH L KS+E ++Q
Sbjct:   730 TVAFGMGINKPDVRFVIHHSLPKSIEGYHQ 759

 Score = 91 (37.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
 Identities = 15/45 (33%), Positives = 24/45 (53%)

Query:   178 QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
             +T   NL  +V YC ++  CRR +   +  E +  T C+  CD+C
Sbjct:   814 ETNTENLLRMVRYCENEVECRRFLQLVHLGEKFDSTNCKKTCDNC 858

 Score = 86 (35.3 bits), Expect = 3.3e-21, Sum P(2) = 3.3e-21
 Identities = 16/52 (30%), Positives = 28/52 (53%)

Query:    60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
             K CL+++   +     ++ GIIY  S  +CE + E L+  G + + YH  +E
Sbjct:   657 KKCLEDIDKFIKENHFDECGIIYCLSRMDCEKVSERLQEFGHKAAFYHGSME 708


>POMBASE|SPAC2G11.12 [details] [associations]
            symbol:rqh1 "RecQ type DNA helicase Rqh1" species:4896
            "Schizosaccharomyces pombe" [GO:0000723 "telomere maintenance"
            evidence=IGI;IMP] [GO:0000724 "double-strand break repair via
            homologous recombination" evidence=IGI] [GO:0000725
            "recombinational repair" evidence=IGI] [GO:0003677 "DNA binding"
            evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005524 "ATP binding" evidence=IC] [GO:0006268 "DNA unwinding
            involved in replication" evidence=ISO] [GO:0006974 "response to DNA
            damage stimulus" evidence=IMP] [GO:0007131 "reciprocal meiotic
            recombination" evidence=IMP] [GO:0009650 "UV protection"
            evidence=IMP] [GO:0031422 "RecQ helicase-Topo III complex"
            evidence=IDA] [GO:0031573 "intra-S DNA damage checkpoint"
            evidence=IDA] [GO:0034065 "replication fork processing at rDNA
            locus" evidence=IGI] [GO:0043007 "maintenance of rDNA"
            evidence=IMP] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IDA] [GO:0043596 "nuclear replication fork"
            evidence=IC] [GO:0045950 "negative regulation of mitotic
            recombination" evidence=IMP] [GO:0071140 "resolution of mitotic
            recombination intermediates" evidence=IMP] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 PomBase:SPAC2G11.12 GO:GO:0005524 EMBL:CU329670
            GenomeReviews:CU329670_GR GO:GO:0003677 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0043596 GO:GO:0000724 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
            GO:GO:0007131 eggNOG:COG0514 KO:K10901 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0045950 GO:GO:0031573
            GO:GO:0009650 GO:GO:0006268 EMBL:Y09426 PIR:S62467
            RefSeq:NP_593092.1 ProteinModelPortal:Q09811 STRING:Q09811
            EnsemblFungi:SPAC2G11.12.1 GeneID:2541620 KEGG:spo:SPAC2G11.12
            OrthoDB:EOG4XSPZ5 NextBio:20802714 GO:GO:0031422 GO:GO:0034065
            GO:GO:0071140 Uniprot:Q09811
        Length = 1328

 Score = 260 (96.6 bits), Expect = 6.1e-21, P = 6.1e-21
 Identities = 59/172 (34%), Positives = 95/172 (55%)

Query:    62 CLDELA-DLMSRRFRNQSGII---YTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             CL   + + ++ + RN  G+    Y   +++ E  R+ ++N   +  +Y   +    +IA
Sbjct:   749 CLSRTSCEQVAAKLRNDYGLKAWHYHAGLEKVE--RQRIQNEW-QSGSYKIIV---ATIA 802

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVF-- 175
             FG+G+DK +VRFVIHH   KS+E +YQE+GRAGRDG+ AHCI++Y   D      ++   
Sbjct:   803 FGMGVDKGDVRFVIHHSFPKSLEGYYQETGRAGRDGKPAHCIMFYSYKDHVTFQKLIMSG 862

Query:   176 --DQQTGLAN---LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               D +T       L  ++ +C ++T CRR  + +YF E +    CR  CD C
Sbjct:   863 DGDAETKERQRQMLRQVIQFCENKTDCRRKQVLAYFGENFDKVHCRKGCDIC 914

 Score = 122 (48.0 bits), Expect = 0.00021, P = 0.00021
 Identities = 22/43 (51%), Positives = 32/43 (74%)

Query:    12 NLWRTSFYQV---SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             N W++  Y++   +IAFG+G+DK +VRFVIHH   KS+E +YQ
Sbjct:   787 NEWQSGSYKIIVATIAFGMGVDKGDVRFVIHHSFPKSLEGYYQ 829


>UNIPROTKB|E1BKM5 [details] [associations]
            symbol:RECQL5 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0016591
            "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0031965
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016591
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            CTD:9400 KO:K10902 InterPro:IPR010716 Pfam:PF06959 ProDom:PD120154
            EMBL:DAAA02049519 IPI:IPI00698201 RefSeq:NP_001179255.1
            UniGene:Bt.62459 Ensembl:ENSBTAT00000015555 GeneID:512590
            KEGG:bta:512590 OMA:DPKIEEF NextBio:20870462 Uniprot:E1BKM5
        Length = 987

 Score = 201 (75.8 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
 Identities = 51/133 (38%), Positives = 78/133 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++
Sbjct:   315 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRSDRDQVSFLI 374

Query:   175 ------FDQQTG------LANL-YN-IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCD 220
                     ++ G       A L ++ +V++C +++ CR A IA YF +  S   C   CD
Sbjct:   375 RKEVAKLQEKRGNKASDKAAVLAFDALVAFC-EESGCRHAAIAKYFGD--SPPACTKGCD 431

Query:   221 HCRGGRRDAKRVD 233
              C+      K++D
Sbjct:   432 CCQNPTGVRKQLD 444

 Score = 80 (33.2 bits), Expect = 1.8e-20, Sum P(2) = 1.8e-20
 Identities = 25/71 (35%), Positives = 33/71 (46%)

Query:    49 FYQVRIK-----PAAQ-KD-CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
             FY V+ K     P    +D CL  L     +      GIIY  + + CE L  EL  RG+
Sbjct:   225 FYDVQFKELLPDPYGNLRDFCLKALGQKADKGLSG-CGIIYCRTREACEQLATELSYRGV 283

Query:   102 RVSAYHAKLES 112
                AYHA L++
Sbjct:   284 NAKAYHAGLKA 294


>TIGR_CMR|CBU_0472 [details] [associations]
            symbol:CBU_0472 "ATP-dependent DNA helicase RecQ"
            species:227377 "Coxiella burnetii RSA 493" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
            "DNA recombination" evidence=ISS] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR006293
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622 EMBL:AE016828
            GenomeReviews:AE016828_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0009432 HSSP:P15043
            HOGENOM:HOG000044388 KO:K03654 TIGRFAMs:TIGR01389 OMA:YCLSRAK
            RefSeq:NP_819507.1 ProteinModelPortal:Q83E59 SMR:Q83E59
            GeneID:1208356 KEGG:cbu:CBU_0472 PATRIC:17929635
            ProtClustDB:CLSK914091 BioCyc:CBUR227377:GJ7S-469-MONOMER
            Uniprot:Q83E59
        Length = 601

 Score = 223 (83.6 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 47/113 (41%), Positives = 72/113 (63%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDKPNVRFV+H+ L K +E +YQE+GRAGRDG  +  +L Y L D+  + S +
Sbjct:   285 TIAFGMGIDKPNVRFVVHYDLPKHIEGYYQETGRAGRDGLPSEALLLYGLRDIAVIKSFI 344

Query:   175 FDQQTGLAN---LY--NIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              +    +     L+  N +S   +   CRR ++ +YF+E+ ++ +C G CD C
Sbjct:   345 ENGNNEIRKRIELHKLNCMSAFAEARTCRRRVLLNYFNESLTE-DC-GNCDIC 395

 Score = 114 (45.2 bits), Expect = 0.00065, P = 0.00065
 Identities = 20/30 (66%), Positives = 26/30 (86%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             +IAFG+GIDKPNVRFV+H+ L K +E +YQ
Sbjct:   285 TIAFGMGIDKPNVRFVVHYDLPKHIEGYYQ 314

 Score = 50 (22.7 bits), Expect = 2.2e-20, Sum P(2) = 2.2e-20
 Identities = 13/47 (27%), Positives = 23/47 (48%)

Query:    64 DELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             ++L + +  R +   GI+Y  S    E++  +L+  G     YHA L
Sbjct:   217 NQLVNFLKDR-KADFGIVYCLSRNRVEEVAAKLQADGYSALPYHAGL 262


>TIGR_CMR|SO_4241 [details] [associations]
            symbol:SO_4241 "ATP-dependent DNA helicase RecQ"
            species:211586 "Shewanella oneidensis MR-1" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
            "DNA recombination" evidence=ISS] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR006293
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622 EMBL:AE014299
            GenomeReviews:AE014299_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0009432 HSSP:P15043
            HOGENOM:HOG000044388 KO:K03654 TIGRFAMs:TIGR01389 OMA:YCLSRAK
            RefSeq:NP_719768.1 ProteinModelPortal:Q8E9M8 SMR:Q8E9M8
            GeneID:1171845 KEGG:son:SO_4241 PATRIC:23528122
            ProtClustDB:CLSK907564 Uniprot:Q8E9M8
        Length = 607

 Score = 201 (75.8 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
 Identities = 49/130 (37%), Positives = 73/130 (56%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GI+K NVRFV+H+ + KS+E +YQE+GRAGRDG  A   + +   D+ ++  ++
Sbjct:   292 TVAFGMGINKSNVRFVVHYDIPKSIEAYYQETGRAGRDGLEAEAFMLFDPADIGRVRHLI 351

Query:   175 FD------QQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR----- 223
                     QQ     L  + ++   QT CRR ++  YFDE  S  E  G CD C      
Sbjct:   352 EQSEPGPQQQVEFHKLNTMAAFAEAQT-CRRQVLLHYFDE--SALEPCGNCDICLDPPKR 408

Query:   224 -GGRRDAKRV 232
               G  DA++V
Sbjct:   409 YNGSEDAQKV 418

 Score = 71 (30.1 bits), Expect = 3.5e-20, Sum P(2) = 3.5e-20
 Identities = 16/57 (28%), Positives = 30/57 (52%)

Query:    52 VRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHA 108
             +R   A + +  ++L   + ++    SGIIY +S +  +++ E L  +G    AYHA
Sbjct:   212 IRYTVAEKLNAANQLRQFLLQQ-NGSSGIIYCSSRRRVDEVAERLTLQGFHAKAYHA 267


>TAIR|locus:2180255 [details] [associations]
            symbol:RECQSIM "RECQ helicase SIM" species:3702
            "Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISM] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
            [GO:0006281 "DNA repair" evidence=IDA] [GO:0043138 "3'-5' DNA
            helicase activity" evidence=IDA] [GO:0006270 "DNA replication
            initiation" evidence=RCA] [GO:0006275 "regulation of DNA
            replication" evidence=RCA] [GO:0051726 "regulation of cell cycle"
            evidence=RCA] InterPro:IPR001650 InterPro:IPR004589
            InterPro:IPR009060 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:AC007478
            InterPro:IPR015940 PROSITE:PS50030 GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 eggNOG:COG0514
            TIGRFAMs:TIGR00614 GO:GO:0008026 GO:GO:0043138 EMBL:AC069556
            HSSP:P15043 EMBL:AJ404475 EMBL:AY059754 EMBL:AY133823
            IPI:IPI00537732 RefSeq:NP_568499.1 UniGene:At.10179
            ProteinModelPortal:Q9FT69 SMR:Q9FT69 IntAct:Q9FT69
            EnsemblPlants:AT5G27680.1 GeneID:832830 KEGG:ath:AT5G27680
            TAIR:At5g27680 HOGENOM:HOG000084012 InParanoid:Q9FT69 KO:K10900
            OMA:CRAKILV PhylomeDB:Q9FT69 ProtClustDB:CLSN2689878
            Genevestigator:Q9FT69 Uniprot:Q9FT69
        Length = 858

 Score = 223 (83.6 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 54/125 (43%), Positives = 77/125 (61%)

Query:   109 KLESNVS-IAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY---RL 164
             KL+  V+ IAFG+GIDK NVR +IH+   +S+E +YQE+GRAGRDG++A C+LY    R 
Sbjct:   547 KLQVVVATIAFGMGIDKKNVRKIIHYGWLQSLEAYYQEAGRAGRDGELAECVLYADLSRA 606

Query:   165 PDVFKLSSMVFDQQTGLANLYNIVSYC----LDQTRCRRAIIASYFDEAWSDTECRGMCD 220
             P +  L S    +QT  A  Y ++S C    ++ ++CR  I+  YF E +S  +C   CD
Sbjct:   607 PTL--LPSRRSKEQTEQA--YKMLSDCFRYGMNTSQCRAKILVEYFGEEFSSKKCNS-CD 661

Query:   221 HCRGG 225
              C  G
Sbjct:   662 VCTEG 666

 Score = 51 (23.0 bits), Expect = 5.8e-20, Sum P(2) = 5.8e-20
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             IIY  + KE  ++ + L   GL+ +AY+A L
Sbjct:   501 IIYVPTRKESVNIAKYLCGVGLKAAAYNASL 531

 Score = 38 (18.4 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
 Identities = 15/61 (24%), Positives = 27/61 (44%)

Query:    31 KPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECE 90
             +PN++F + H  +K   ++          KD    L DL S + +N +G       +E E
Sbjct:   362 RPNLQFSVKHSRTKFASSY---------AKD-FQNLVDLYSEK-KNSTGKKLAVISRESE 410

Query:    91 D 91
             +
Sbjct:   411 E 411


>WB|WBGene00004322 [details] [associations]
            symbol:rcq-5 species:6239 "Caenorhabditis elegans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IMP]
            [GO:0008340 "determination of adult lifespan" evidence=IMP]
            InterPro:IPR001650 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0008340 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006974 GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            EMBL:Z38112 HSSP:P15043 KO:K10902 PIR:T20430 RefSeq:NP_497810.1
            ProteinModelPortal:Q19046 SMR:Q19046 PaxDb:Q19046
            EnsemblMetazoa:E03A3.2 GeneID:175522 KEGG:cel:CELE_E03A3.2
            UCSC:E03A3.2 CTD:175522 WormBase:E03A3.2 HOGENOM:HOG000021815
            InParanoid:Q19046 OMA:AWAEIFN NextBio:888512 Uniprot:Q19046
        Length = 809

 Score = 162 (62.1 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
 Identities = 30/60 (50%), Positives = 45/60 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP+VR VIH   S+++  +YQE+GRAGRDG+ ++C +YY   D   L+ +V
Sbjct:   471 TVAFGMGIDKPDVRAVIHWSPSQNLAGYYQEAGRAGRDGKRSYCRIYYSKQDKNALNFLV 530

 Score = 101 (40.6 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
 Identities = 25/59 (42%), Positives = 33/59 (55%)

Query:   178 QTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM---CDHCRGGRRDAKRVD 233
             QTGLA +   + YC +  RCR   IAS+FD    DTECR     CD+CR   +  + V+
Sbjct:   559 QTGLAKM---LEYC-ESARCRHVSIASFFD----DTECRPCKTNCDYCRDPTKTIRNVE 609

 Score = 90 (36.7 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
 Identities = 16/30 (53%), Positives = 24/30 (80%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             ++AFG+GIDKP+VR VIH   S+++  +YQ
Sbjct:   471 TVAFGMGIDKPDVRAVIHWSPSQNLAGYYQ 500

 Score = 58 (25.5 bits), Expect = 2.4e-19, Sum P(3) = 2.4e-19
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query:    78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             S I+Y  S  EC  + + L   G+   AYHA L
Sbjct:   416 SAIVYCRSRNECGQVAKMLEIAGIPAMAYHAGL 448


>UNIPROTKB|Q8EEK1 [details] [associations]
            symbol:SO_2380 "ATP-dependent DNA helicase RecQ family"
            species:211586 "Shewanella oneidensis MR-1" [GO:0003674
            "molecular_function" evidence=ND] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 TIGRFAMs:TIGR00614
            GO:GO:0008026 HSSP:P15043 HOGENOM:HOG000044388 KO:K03654
            OMA:GHNFRPD ProtClustDB:CLSK906704 RefSeq:NP_717970.1
            ProteinModelPortal:Q8EEK1 GeneID:1170099 KEGG:son:SO_2380
            PATRIC:23524381 Uniprot:Q8EEK1
        Length = 654

 Score = 196 (74.1 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
 Identities = 36/82 (43%), Positives = 55/82 (67%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK N+RFVIH+ L KS+EN+ QE GRAGRDGQ++HC+    L  +  + + V
Sbjct:   295 TIAFGMGIDKSNIRFVIHYDLPKSIENYCQEIGRAGRDGQLSHCVTLANLDGINTVENFV 354

Query:   175 FDQQTGLANLYNIVSYCLDQTR 196
             +     LA++  ++     +T+
Sbjct:   355 YGDTPELASIATVIDSISQETQ 376

 Score = 113 (44.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query:    13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             L +T     +IAFG+GIDK N+RFVIH+ L KS+EN+ Q
Sbjct:   286 LGQTQIVVATIAFGMGIDKSNIRFVIHYDLPKSIENYCQ 324

 Score = 60 (26.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query:   181 LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
             +A +  +V +  + T C    +A YFD+  +   C G C  CRG
Sbjct:   528 VARIAQLVRF-FELTTCLNYNLARYFDDNAAPKSC-GHCSVCRG 569

 Score = 56 (24.8 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query:    78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             +GI+Y T     E++  +L + G    AYHA  + +
Sbjct:   240 AGIVYVTLQHTAEEVASQLCSMGFVAQAYHAGFDDD 275


>TIGR_CMR|SO_2380 [details] [associations]
            symbol:SO_2380 "RecQ domain protein" species:211586
            "Shewanella oneidensis MR-1" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0006310 "DNA recombination" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 EMBL:AE014299
            GenomeReviews:AE014299_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 TIGRFAMs:TIGR00614 GO:GO:0008026
            HSSP:P15043 HOGENOM:HOG000044388 KO:K03654 OMA:GHNFRPD
            ProtClustDB:CLSK906704 RefSeq:NP_717970.1 ProteinModelPortal:Q8EEK1
            GeneID:1170099 KEGG:son:SO_2380 PATRIC:23524381 Uniprot:Q8EEK1
        Length = 654

 Score = 196 (74.1 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
 Identities = 36/82 (43%), Positives = 55/82 (67%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK N+RFVIH+ L KS+EN+ QE GRAGRDGQ++HC+    L  +  + + V
Sbjct:   295 TIAFGMGIDKSNIRFVIHYDLPKSIENYCQEIGRAGRDGQLSHCVTLANLDGINTVENFV 354

Query:   175 FDQQTGLANLYNIVSYCLDQTR 196
             +     LA++  ++     +T+
Sbjct:   355 YGDTPELASIATVIDSISQETQ 376

 Score = 113 (44.8 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 22/39 (56%), Positives = 29/39 (74%)

Query:    13 LWRTSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             L +T     +IAFG+GIDK N+RFVIH+ L KS+EN+ Q
Sbjct:   286 LGQTQIVVATIAFGMGIDKSNIRFVIHYDLPKSIENYCQ 324

 Score = 60 (26.2 bits), Expect = 7.1e-06, Sum P(2) = 7.1e-06
 Identities = 14/44 (31%), Positives = 22/44 (50%)

Query:   181 LANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
             +A +  +V +  + T C    +A YFD+  +   C G C  CRG
Sbjct:   528 VARIAQLVRF-FELTTCLNYNLARYFDDNAAPKSC-GHCSVCRG 569

 Score = 56 (24.8 bits), Expect = 5.7e-18, Sum P(2) = 5.7e-18
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query:    78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             +GI+Y T     E++  +L + G    AYHA  + +
Sbjct:   240 AGIVYVTLQHTAEEVASQLCSMGFVAQAYHAGFDDD 275


>UNIPROTKB|O34748 [details] [associations]
            symbol:recQ "Probable ATP-dependent DNA helicase RecQ"
            species:224308 "Bacillus subtilis subsp. subtilis str. 168"
            [GO:0043590 "bacterial nucleoid" evidence=IDA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR006293
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0005737 GO:GO:0003677
            GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0043590 GO:GO:0009432 HSSP:P15043
            HOGENOM:HOG000044388 EMBL:AF027868 PIR:F69901 RefSeq:NP_389803.1
            ProteinModelPortal:O34748 SMR:O34748
            EnsemblBacteria:EBBACT00000001699 GeneID:939671 KEGG:bsu:BSU19220
            PATRIC:18975693 GenoList:BSU19220 KO:K03654 OMA:HAAYINS
            ProtClustDB:CLSK887416 BioCyc:BSUB:BSU19220-MONOMER
            TIGRFAMs:TIGR01389 Uniprot:O34748
        Length = 591

 Score = 207 (77.9 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
 Identities = 53/144 (36%), Positives = 79/144 (54%)

Query:    90 EDLREELRNRGLRVSAYHAKLESNVSI-AFGLGIDKPNVRFVIHHCLSKSMENFYQESGR 148
             +D+R+E + R L     + +L+  V+  AFG+GIDK N+RFV+H  + K ME++YQE+GR
Sbjct:   266 DDVRKEQQERFL-----NDELQVMVATSAFGMGIDKSNIRFVLHAQIPKDMESYYQEAGR 320

Query:   149 AGRDGQIAHCILYYRLPDV----FKLSSMVFD--QQTGLANLYNIVSYCLDQTRCRRAII 202
             AGRDG  + C+L +   D+    F +     +  Q+  L  L  +V YC  +  C +  I
Sbjct:   321 AGRDGLASECVLLFSPQDIMVQRFLIEQSEHEEKQKQDLKKLRQMVDYCHTED-CLQRFI 379

Query:   203 ASYFDEAWSDTECRGMCDHCRGGR 226
               YF E   D  C G C +C   R
Sbjct:   380 LMYFGEKEPDA-C-GQCGNCTDTR 401

 Score = 39 (18.8 bits), Expect = 1.5e-17, Sum P(2) = 1.5e-17
 Identities = 15/45 (33%), Positives = 21/45 (46%)

Query:     6 YTIAYLNLWR-TSFYQVSIAFGLGIDKPNVRFVIHHCLSKSMENF 49
             Y + Y+   R TS   + I    GID P V     HC+S+   +F
Sbjct:   109 YKLFYITPERLTSIEFIRIL--QGIDVPLVAIDEAHCISQWGHDF 151


>RGD|1308810 [details] [associations]
            symbol:Blm "Bloom syndrome, RecQ helicase-like" species:10116
            "Rattus norvegicus" [GO:0000079 "regulation of cyclin-dependent
            protein serine/threonine kinase activity" evidence=ISO] [GO:0000405
            "bubble DNA binding" evidence=ISO] [GO:0000723 "telomere
            maintenance" evidence=ISO] [GO:0000729 "DNA double-strand break
            processing" evidence=ISO] [GO:0000733 "DNA strand renaturation"
            evidence=ISO] [GO:0000800 "lateral element" evidence=ISO]
            [GO:0001673 "male germ cell nucleus" evidence=ISO] [GO:0002039 "p53
            binding" evidence=ISO] [GO:0003674 "molecular_function"
            evidence=ND] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003697
            "single-stranded DNA binding" evidence=ISO] [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISO] [GO:0004386
            "helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
            evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005657 "replication
            fork" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic
            process" evidence=ISO] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=ISO] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=ISO] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA;ISO] [GO:0008150 "biological_process"
            evidence=ND] [GO:0009378 "four-way junction helicase activity"
            evidence=ISO] [GO:0010165 "response to X-ray" evidence=ISO]
            [GO:0016363 "nuclear matrix" evidence=ISO] [GO:0016605 "PML body"
            evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISO]
            [GO:0031297 "replication fork processing" evidence=ISO] [GO:0036310
            "annealing helicase activity" evidence=ISO] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            [GO:0045120 "pronucleus" evidence=ISO] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISO]
            [GO:0045910 "negative regulation of DNA recombination"
            evidence=ISO] [GO:0045950 "negative regulation of mitotic
            recombination" evidence=ISO] [GO:0046632 "alpha-beta T cell
            differentiation" evidence=ISO] [GO:0046641 "positive regulation of
            alpha-beta T cell proliferation" evidence=ISO] [GO:0051098
            "regulation of binding" evidence=ISO] [GO:0051259 "protein
            oligomerization" evidence=ISO] [GO:0051276 "chromosome
            organization" evidence=ISO] [GO:0051782 "negative regulation of
            cell division" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
            evidence=ISO] [GO:0000781 "chromosome, telomeric region"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 InterPro:IPR012532
            Pfam:PF00270 Pfam:PF00271 Pfam:PF08072 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 RGD:1308810 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003677 GO:GO:0006260 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 TIGRFAMs:TIGR00614
            GO:GO:0008026 IPI:IPI00561580 Ensembl:ENSRNOT00000030936
            UCSC:RGD:1308810 ArrayExpress:D3ZSJ5 Uniprot:D3ZSJ5
        Length = 999

 Score = 226 (84.6 bits), Expect = 1.7e-17, P = 1.7e-17
 Identities = 46/117 (39%), Positives = 74/117 (63%)

Query:    58 AQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIA 117
             ++K+C D +AD + R     + + Y   + +    R+E++++ +             +IA
Sbjct:   888 SRKEC-DTMADTLQRE--GLAALAYHAGLSD--SARDEVQHKWINQDNCQVIC---ATIA 939

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             FG+GIDKP+VRFV+H  L KS+E +YQESGRAGRDG+I+HC+L+Y   DV +L  ++
Sbjct:   940 FGMGIDKPDVRFVVHASLPKSVEGYYQESGRAGRDGEISHCVLFYTYHDVTRLKRLI 996


>GENEDB_PFALCIPARUM|PF14_0278 [details] [associations]
            symbol:PF14_0278 "ATP-dependent DNA helicase,
            putative" species:5833 "Plasmodium falciparum" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF09382
            PROSITE:PS51194 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006310 EMBL:AE014187 GO:GO:0004003
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 KO:K01509 HSSP:P15043
            RefSeq:XP_001348452.1 ProteinModelPortal:Q8ILG5
            EnsemblProtists:PF14_0278:mRNA GeneID:811860 KEGG:pfa:PF14_0278
            EuPathDB:PlasmoDB:PF3D7_1429900 ProtClustDB:CLSZ2501048
            Uniprot:Q8ILG5
        Length = 1440

 Score = 174 (66.3 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
 Identities = 38/108 (35%), Positives = 63/108 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP++R +IH+  ++S+E + Q+ GRAGRD   A  IL++ + D  K+ +++
Sbjct:   341 TVAFGMGIDKPDIRRIIHYGFARSLEAYVQQVGRAGRDNSDAEAILFFHINDESKIKNII 400

Query:   175 FDQQTG----------LANLYNIVSYCLD---QTRCRRAIIASYFDEA 209
               + T           + ++ +I +   D    T CRR  I  YFDEA
Sbjct:   401 LRENTANNLIETNFQRVEHIVHIFTQASDYAYSTACRRKKIYEYFDEA 448

 Score = 77 (32.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
 Identities = 29/78 (37%), Positives = 38/78 (48%)

Query:    49 FYQVRIKPAAQ---KDCLD-ELADLMSR--RFRNQSGI-------IYTTSIKECEDLREE 95
             FY VR K       KD LD  L + + R  +F + S I       IY  S KECE +   
Sbjct:   244 FYSVREKTDIYHDLKDILDIPLKESIERTKKFIDNSKICSYNSTLIYVNSKKECESVYSF 303

Query:    96 LRNRGLRVSAYHAKLESN 113
             L+ +GL V  YHA L ++
Sbjct:   304 LKEKGLLVLMYHADLTND 321


>UNIPROTKB|Q8ILG5 [details] [associations]
            symbol:PF14_0278 "ATP-dependent DNA helicase, putative"
            species:36329 "Plasmodium falciparum 3D7" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF09382
            PROSITE:PS51194 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006310 EMBL:AE014187 GO:GO:0004003
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 KO:K01509 HSSP:P15043
            RefSeq:XP_001348452.1 ProteinModelPortal:Q8ILG5
            EnsemblProtists:PF14_0278:mRNA GeneID:811860 KEGG:pfa:PF14_0278
            EuPathDB:PlasmoDB:PF3D7_1429900 ProtClustDB:CLSZ2501048
            Uniprot:Q8ILG5
        Length = 1440

 Score = 174 (66.3 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
 Identities = 38/108 (35%), Positives = 63/108 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP++R +IH+  ++S+E + Q+ GRAGRD   A  IL++ + D  K+ +++
Sbjct:   341 TVAFGMGIDKPDIRRIIHYGFARSLEAYVQQVGRAGRDNSDAEAILFFHINDESKIKNII 400

Query:   175 FDQQTG----------LANLYNIVSYCLD---QTRCRRAIIASYFDEA 209
               + T           + ++ +I +   D    T CRR  I  YFDEA
Sbjct:   401 LRENTANNLIETNFQRVEHIVHIFTQASDYAYSTACRRKKIYEYFDEA 448

 Score = 77 (32.2 bits), Expect = 6.6e-17, Sum P(2) = 6.6e-17
 Identities = 29/78 (37%), Positives = 38/78 (48%)

Query:    49 FYQVRIKPAAQ---KDCLD-ELADLMSR--RFRNQSGI-------IYTTSIKECEDLREE 95
             FY VR K       KD LD  L + + R  +F + S I       IY  S KECE +   
Sbjct:   244 FYSVREKTDIYHDLKDILDIPLKESIERTKKFIDNSKICSYNSTLIYVNSKKECESVYSF 303

Query:    96 LRNRGLRVSAYHAKLESN 113
             L+ +GL V  YHA L ++
Sbjct:   304 LKEKGLLVLMYHADLTND 321


>UNIPROTKB|I3LFW3 [details] [associations]
            symbol:RECQL5 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0016591
            "DNA-directed RNA polymerase II, holoenzyme" evidence=IEA]
            [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0031965
            GO:GO:0003676 GO:GO:0006310 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0016591 GeneTree:ENSGT00550000074520
            TIGRFAMs:TIGR00614 GO:GO:0008026 EMBL:FP565693
            Ensembl:ENSSSCT00000025315 OMA:DALIIMP Uniprot:I3LFW3
        Length = 432

 Score = 169 (64.5 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
 Identities = 32/60 (53%), Positives = 45/60 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +I+FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++
Sbjct:   312 TISFGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGRPSWCRLYYSRNDRDQVSFLI 371

 Score = 77 (32.2 bits), Expect = 1.0e-16, Sum P(2) = 1.0e-16
 Identities = 24/71 (33%), Positives = 33/71 (46%)

Query:    49 FYQVRIK-----PAAQ-KD-CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGL 101
             FY V+ K     P    +D CL  L     +      GI+Y  + + CE L  EL  RG+
Sbjct:   222 FYDVQFKELLSDPYGNLRDFCLKALGQKADKGLSG-CGIVYCRTREACEQLAIELSARGV 280

Query:   102 RVSAYHAKLES 112
                AYHA L++
Sbjct:   281 NAKAYHAGLKA 291


>TIGR_CMR|GSU_0898 [details] [associations]
            symbol:GSU_0898 "ATP-dependent DNA helicase RecQ"
            species:243231 "Geobacter sulfurreducens PCA" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
            "DNA recombination" evidence=ISS] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR006293
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622 EMBL:AE017180
            GenomeReviews:AE017180_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0009432
            HOGENOM:HOG000044388 KO:K03654 TIGRFAMs:TIGR01389 OMA:YCLSRAK
            RefSeq:NP_951954.1 ProteinModelPortal:Q74ER2 SMR:Q74ER2
            GeneID:2687381 KEGG:gsu:GSU0898 PATRIC:22024565
            ProtClustDB:CLSK828090 BioCyc:GSUL243231:GH27-885-MONOMER
            Uniprot:Q74ER2
        Length = 603

 Score = 213 (80.0 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 66/212 (31%), Positives = 104/212 (49%)

Query:    25 FGLGIDKPNVRFVIHHCLS--KSMENFYQVRIKPAAQKDCLD-ELADLMSRRFRNQSGI- 80
             F  G D+PN+R+ +       + +E F   R + A    CL  +  + ++ + R  +G+ 
Sbjct:   196 FVTGFDRPNIRYSVLEKQKPFRQLEEFLATRPREAGIVYCLSRKRVEEVAEKLR-AAGVE 254

Query:    81 --IYTTSIKECEDLR--EELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVIHHCLS 136
                Y   + + E  R  E      +RV           ++AFG+GIDKPNVRFV+H+ L 
Sbjct:   255 AGAYHAGLADAERSRVQEAFLRDDIRVVV--------ATVAFGMGIDKPNVRFVVHYDLP 306

Query:   137 KSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD----QQTG--LANLYNIVSY 190
             K++E++YQE+GRAGRDG  A  +L +   D+    S++      +Q    L  L  +V +
Sbjct:   307 KNIESYYQETGRAGRDGLPAEALLLFGYGDIPVSRSLIESGGNPEQVRIELHKLNAMVGF 366

Query:   191 CLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
               +   CRR  +  YF E   +  C G CD C
Sbjct:   367 A-EALVCRRRALLGYFGERLEEP-C-GNCDLC 395

 Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
 Identities = 19/30 (63%), Positives = 28/30 (93%)

Query:    22 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQ 51
             ++AFG+GIDKPNVRFV+H+ L K++E++YQ
Sbjct:   285 TVAFGMGIDKPNVRFVVHYDLPKNIESYYQ 314


>UNIPROTKB|F1NT69 [details] [associations]
            symbol:F1NT69 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
            evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0031965 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016591 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            GO:GO:0008026 EMBL:AADN02029969 EMBL:AADN02029968 IPI:IPI00819481
            ProteinModelPortal:F1NT69 Ensembl:ENSGALT00000038980
            ArrayExpress:F1NT69 Uniprot:F1NT69
        Length = 451

 Score = 208 (78.3 bits), Expect = 3.4e-16, P = 3.4e-16
 Identities = 60/180 (33%), Positives = 94/180 (52%)

Query:    60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVS-IAF 118
             +D  D+LA  +S  +R      Y   +K  +  R  ++N  +       K+   V+ I+F
Sbjct:   275 RDVCDQLAIELS--YRGVKAKAYHAGLKAAD--RTSVQNEWME-----EKIPVIVATISF 325

Query:   119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
             G+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++    
Sbjct:   326 GMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKEL 385

Query:   175 --FDQQTG--------LANLYN-IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
                 ++ G        +   ++ IVS+C ++  CR A IA YF +      C   CD+C+
Sbjct:   386 SKIQEKKGTLKESDKSVMTAFDAIVSFC-EELGCRHAAIAKYFGDV--TPPCNKCCDYCK 442


>FB|FBgn0027375 [details] [associations]
            symbol:RecQ5 "homolog of RecQ" species:7227 "Drosophila
            melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISS] [GO:0005634 "nucleus" evidence=IDA] [GO:0003678 "DNA
            helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
            evidence=ISS] [GO:0017116 "single-stranded DNA-dependent
            ATP-dependent DNA helicase activity" evidence=IDA] [GO:0003924
            "GTPase activity" evidence=IDA] [GO:0005525 "GTP binding"
            evidence=IDA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=IDA;IMP] [GO:0045930 "negative regulation of
            mitotic cell cycle" evidence=IMP] [GO:0010165 "response to X-ray"
            evidence=IDA] [GO:0045002 "double-strand break repair via
            single-strand annealing" evidence=IMP] [GO:0090007 "regulation of
            mitotic anaphase" evidence=IDA] InterPro:IPR001650
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005525 GO:GO:0005524
            GO:GO:0005634 GO:GO:0003924 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0006310 GO:GO:0010165 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0045002 GO:GO:0045930
            TIGRFAMs:TIGR00614 GO:GO:0090007 GO:GO:0017116 HSSP:P15043
            FlyBase:FBgn0027375 EMBL:AB031086 ProteinModelPortal:Q9U5E0
            PRIDE:Q9U5E0 InParanoid:Q9U5E0 ArrayExpress:Q9U5E0 Bgee:Q9U5E0
            Uniprot:Q9U5E0
        Length = 1058

 Score = 193 (73.0 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
 Identities = 45/132 (34%), Positives = 73/132 (55%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV----FKLSS 172
             +FG+G+DKP+VRFVIH  + +++  +YQESGRAGRDG  ++C LYY   DV    F L +
Sbjct:   315 SFGMGVDKPSVRFVIHWDVPQNVAAYYQESGRAGRDGLQSYCRLYYGREDVRSIRFLLQN 374

Query:   173 MVF------DQQT----GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
                      D++      +     I  +C ++T CR  + + +F +   D  C G CD C
Sbjct:   375 DAHRARGRGDKELLTERAIKQFEKITEFC-ERTTCRHKLFSDFFGDPTPD--CSGQCDVC 431

Query:   223 RGGRRDAKRVDV 234
             +  ++  K +++
Sbjct:   432 KRPKKADKALEM 443

 Score = 47 (21.6 bits), Expect = 4.1e-16, Sum P(2) = 4.1e-16
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query:    79 GIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
             GI+Y  +  + E +   +  +G+   AYHA L++
Sbjct:   259 GIVYCRTRDQVERMAIGVTKQGIGAVAYHAGLKT 292


>UNIPROTKB|F1PZR2 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010396
            Uniprot:F1PZR2
        Length = 1336

 Score = 172 (65.6 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 45/131 (34%), Positives = 70/131 (53%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV----FKL 170
             +IAFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C + +   D+     +L
Sbjct:   800 TIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPADICLNRHRL 859

Query:   171 SSMVFDQQT--GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHC 222
             S +  ++     L  +  +  Y L  TRCRR +I S+F++        G+      CD+C
Sbjct:   860 SEITSEKFRLYKLKMMAKMEKY-LHSTRCRRQLILSHFEDKQLRKASVGIMGTEQCCDNC 918

Query:   223 RGGRRDAKRVD 233
             R        +D
Sbjct:   919 RSRLDQCSSID 929

 Score = 66 (28.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
 Identities = 26/78 (33%), Positives = 34/78 (43%)

Query:    41 CLSKSMENFY-QVRIKPAAQKDCLDELADLMSRRFRNQ----SG--IIYTTSIKECEDLR 93
             C      N Y +VR K  +    L +L   + ++ RN      G  IIY  S K  E + 
Sbjct:   704 CTGFDRPNLYLEVRRKTGS---ILQDLDQFLVQKTRNSIWEFEGPTIIYCPSRKTTEQVT 760

Query:    94 EELRNRGLRVSAYHAKLE 111
              ELR   L   AYHA L+
Sbjct:   761 AELRKLKLACGAYHAGLD 778


>UNIPROTKB|F1NWK5 [details] [associations]
            symbol:F1NWK5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0016591 "DNA-directed RNA polymerase II, holoenzyme"
            evidence=IEA] [GO:0031965 "nuclear membrane" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
            GO:GO:0031965 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0016591 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            GO:GO:0008026 InterPro:IPR010716 Pfam:PF06959 ProDom:PD120154
            OMA:DPKIEEF EMBL:AADN02029969 EMBL:AADN02029968 IPI:IPI00812208
            Ensembl:ENSGALT00000003814 ArrayExpress:F1NWK5 Uniprot:F1NWK5
        Length = 1023

 Score = 208 (78.3 bits), Expect = 1.5e-15, P = 1.5e-15
 Identities = 60/180 (33%), Positives = 94/180 (52%)

Query:    60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVS-IAF 118
             +D  D+LA  +S  +R      Y   +K  +  R  ++N  +       K+   V+ I+F
Sbjct:   275 RDVCDQLAIELS--YRGVKAKAYHAGLKAAD--RTSVQNEWME-----EKIPVIVATISF 325

Query:   119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
             G+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++    
Sbjct:   326 GMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSCCRLYYSRNDRDQVSFLIKKEL 385

Query:   175 --FDQQTG--------LANLYN-IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCR 223
                 ++ G        +   ++ IVS+C ++  CR A IA YF +      C   CD+C+
Sbjct:   386 SKIQEKKGTLKESDKSVMTAFDAIVSFC-EELGCRHAAIAKYFGDV--TPPCNKCCDYCK 442


>UNIPROTKB|F1PZR3 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000010395
            Uniprot:F1PZR3
        Length = 1499

 Score = 172 (65.6 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 45/131 (34%), Positives = 70/131 (53%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV----FKL 170
             +IAFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C + +   D+     +L
Sbjct:   880 TIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPADICLNRHRL 939

Query:   171 SSMVFDQQT--GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHC 222
             S +  ++     L  +  +  Y L  TRCRR +I S+F++        G+      CD+C
Sbjct:   940 SEITSEKFRLYKLKMMAKMEKY-LHSTRCRRQLILSHFEDKQLRKASVGIMGTEQCCDNC 998

Query:   223 RGGRRDAKRVD 233
             R        +D
Sbjct:   999 RSRLDQCSSID 1009

 Score = 65 (27.9 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
 Identities = 24/74 (32%), Positives = 30/74 (40%)

Query:    41 CLSKSMENFY-QVRIKPAAQKDCLDELADLMSRRFRNQSG--IIYTTSIKECEDLREELR 97
             C      N Y +VR K  +    LD+     +       G  IIY  S K  E +  ELR
Sbjct:   785 CTGFDRPNLYLEVRRKTGSILQDLDQFLVQKTSSIWEFEGPTIIYCPSRKTTEQVTAELR 844

Query:    98 NRGLRVSAYHAKLE 111
                L   AYHA L+
Sbjct:   845 KLKLACGAYHAGLD 858

 Score = 43 (20.2 bits), Expect = 4.0e-13, Sum P(2) = 4.0e-13
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query:    42 LSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL 96
             +S   E    V  K + QK   ++  DL    F     I+Y+    +C  L E++
Sbjct:    19 MSMQNETCTAVETKASIQKSVFED--DLSFLEFTGS--IVYSYEASDCSFLSEDI 69


>UNIPROTKB|F1PUF8 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:AAEX03010418 Ensembl:ENSCAFT00000037050
            OMA:TERICLM Uniprot:F1PUF8
        Length = 1574

 Score = 172 (65.6 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 45/131 (34%), Positives = 70/131 (53%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV----FKL 170
             +IAFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C + +   D+     +L
Sbjct:   912 TIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHVLWAPADICLNRHRL 971

Query:   171 SSMVFDQQT--GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHC 222
             S +  ++     L  +  +  Y L  TRCRR +I S+F++        G+      CD+C
Sbjct:   972 SEITSEKFRLYKLKMMAKMEKY-LHSTRCRRQLILSHFEDKQLRKASVGIMGTEQCCDNC 1030

Query:   223 RGGRRDAKRVD 233
             R        +D
Sbjct:  1031 RSRLDQCSSID 1041

 Score = 65 (27.9 bits), Expect = 2.3e-15, Sum P(2) = 2.3e-15
 Identities = 24/74 (32%), Positives = 30/74 (40%)

Query:    41 CLSKSMENFY-QVRIKPAAQKDCLDELADLMSRRFRNQSG--IIYTTSIKECEDLREELR 97
             C      N Y +VR K  +    LD+     +       G  IIY  S K  E +  ELR
Sbjct:   817 CTGFDRPNLYLEVRRKTGSILQDLDQFLVQKTSSIWEFEGPTIIYCPSRKTTEQVTAELR 876

Query:    98 NRGLRVSAYHAKLE 111
                L   AYHA L+
Sbjct:   877 KLKLACGAYHAGLD 890

 Score = 43 (20.2 bits), Expect = 4.5e-13, Sum P(2) = 4.5e-13
 Identities = 14/55 (25%), Positives = 23/55 (41%)

Query:    42 LSKSMENFYQVRIKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL 96
             +S   E    V  K + QK   ++  DL    F     I+Y+    +C  L E++
Sbjct:   138 MSMQNETCTAVETKASIQKSVFED--DLSFLEFTGS--IVYSYEASDCSFLSEDI 188


>RGD|1310823 [details] [associations]
            symbol:Recql5 "RecQ protein-like 5" species:10116 "Rattus
            norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0016591 "DNA-directed RNA polymerase II,
            holoenzyme" evidence=IEA;ISO] [GO:0031965 "nuclear membrane"
            evidence=IEA;ISO] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 RGD:1310823
            GO:GO:0005524 GO:GO:0005730 GO:GO:0031965 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 GO:GO:0006310 EMBL:CH473948
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016591
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            CTD:9400 KO:K10902 OrthoDB:EOG46WZ7X InterPro:IPR010716
            Pfam:PF06959 ProDom:PD120154 OMA:DPKIEEF IPI:IPI00364336
            RefSeq:NP_001099323.1 UniGene:Rn.198916 Ensembl:ENSRNOT00000007246
            GeneID:287834 KEGG:rno:287834 NextBio:627111 Uniprot:D4ACP5
        Length = 973

 Score = 205 (77.2 bits), Expect = 2.9e-15, P = 2.9e-15
 Identities = 63/189 (33%), Positives = 98/189 (51%)

Query:    60 KDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVS-IAF 118
             ++  ++LA  +S R  N     Y   +K  E  R +++N  +       K+   V+ I+F
Sbjct:   270 REACEQLAIELSSRGVNAKA--YHAGLKASE--RTQVQNEWME-----EKVPVIVATISF 320

Query:   119 GLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV---- 174
             G+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++    
Sbjct:   321 GMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLIRKEL 380

Query:   175 --FDQQTG-----LANLYN---IVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRG 224
                 ++ G      A L     +V++C ++  CR A IA YF +A     C   CD C+ 
Sbjct:   381 AKLQEKRGNKPSDKATLLAFDALVTFC-EEVGCRHAAIAKYFGDA--PPACAKGCDCCQS 437

Query:   225 GRRDAKRVD 233
                  K++D
Sbjct:   438 PAAIRKKLD 446


>TIGR_CMR|SPO_0107 [details] [associations]
            symbol:SPO_0107 "ATP-dependent DNA helicase RecQ"
            species:246200 "Ruegeria pomeroyi DSS-3" [GO:0004003 "ATP-dependent
            DNA helicase activity" evidence=ISS] [GO:0006310 "DNA
            recombination" evidence=ISS] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR004589 InterPro:IPR006293 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 GO:GO:0005622
            GO:GO:0006310 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614
            GO:GO:0009432 HOGENOM:HOG000044388 KO:K03654 TIGRFAMs:TIGR01389
            OMA:YCLSRAK RefSeq:YP_165381.1 ProteinModelPortal:Q5LWQ8
            GeneID:3194995 KEGG:sil:SPO0107 PATRIC:23373451
            ProtClustDB:CLSK933158 Uniprot:Q5LWQ8
        Length = 679

 Score = 169 (64.5 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
 Identities = 45/117 (38%), Positives = 62/117 (52%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GIDKP++R+V H  L KS+E +YQE GRAGRDG  A  +  +  PD  +L    
Sbjct:   284 TVAFGMGIDKPDIRWVAHADLPKSIEAYYQEIGRAGRDGGPAETLTLFG-PDDIRLRRSQ 342

Query:   175 FDQQTGLAN---------LYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
              D+  GLA            N +    +   CRR  +  YF E  ++  C G CD C
Sbjct:   343 IDE--GLAPPERRAADHARLNALLGLAEAMTCRRQTLLGYFGE--TEITC-GKCDLC 394

 Score = 67 (28.6 bits), Expect = 5.3e-15, Sum P(2) = 5.3e-15
 Identities = 18/56 (32%), Positives = 27/56 (48%)

Query:    57 AAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLES 112
             AA+     ++ D    R R QSGI+Y  +  + E L + LR  G     YH  +E+
Sbjct:   209 AAKDSPRRQILDFAGAR-RGQSGIVYCGTRAKTETLAQALREDGHSACHYHGGMEA 263


>WB|WBGene00006944 [details] [associations]
            symbol:wrn-1 species:6239 "Caenorhabditis elegans"
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
            [GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
            development" evidence=IMP] [GO:0040018 "positive regulation of
            multicellular organism growth" evidence=IMP] [GO:0010171 "body
            morphogenesis" evidence=IMP] [GO:0018991 "oviposition"
            evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
            evidence=IMP] [GO:0008340 "determination of adult lifespan"
            evidence=IMP] [GO:0007049 "cell cycle" evidence=IMP] [GO:0010212
            "response to ionizing radiation" evidence=IMP] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005694 "chromosome" evidence=IDA]
            [GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006259 "DNA metabolic
            process" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005662 "DNA replication factor A complex" evidence=IDA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF09382 PROSITE:PS00690
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0008340 GO:GO:0002009
            GO:GO:0040007 GO:GO:0018991 GO:GO:0005694 GO:GO:0005654
            GO:GO:0002119 GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
            GO:GO:0010171 GO:GO:0040018 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0010212 GO:GO:0007049 GO:GO:0006310 GO:GO:0040035
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 KO:K10900 EMBL:FO080970
            PIR:T16087 RefSeq:NP_495324.2 ProteinModelPortal:Q19546 SMR:Q19546
            IntAct:Q19546 MINT:MINT-226609 STRING:Q19546 PaxDb:Q19546
            EnsemblMetazoa:F18C5.2 GeneID:174081 KEGG:cel:CELE_F18C5.2
            UCSC:F18C5.2 CTD:174081 WormBase:F18C5.2 HOGENOM:HOG000016918
            InParanoid:Q19546 OMA:CSGFDRP NextBio:882429 Uniprot:Q19546
        Length = 1056

 Score = 171 (65.3 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
 Identities = 45/133 (33%), Positives = 71/133 (53%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDV----FKL 170
             ++AFG+GIDKP+VR VIH+    ++E++YQE GRAGRDG  + C +++   D+    FKL
Sbjct:   503 TVAFGMGIDKPDVRNVIHYGCPNNIESYYQEIGRAGRDGSPSICRVFWAPKDLNTIKFKL 562

Query:   171 SSMVFDQQT--GLANLYNIVSYCLDQTRCRRAIIASYFDEAWSD--TECRGMCDHCR--- 223
              +    ++    L  +   +   L    CRR  +  +FD +++   T     CD C    
Sbjct:   563 RNSQQKEEVVENLTMMLRQLELVLTTVGCRRYQLLKHFDPSYAKPPTMQADCCDRCTEML 622

Query:   224 GGRRDAKR--VDV 234
              G +D+    VDV
Sbjct:   623 NGNQDSSSSIVDV 635

 Score = 56 (24.8 bits), Expect = 3.8e-14, Sum P(2) = 3.8e-14
 Identities = 22/72 (30%), Positives = 34/72 (47%)

Query:    47 ENFYQVRIKPAAQKDCLDELADLMSR---RFRNQSG--IIYTTSIKECEDLREELRNRGL 101
             +N Y   I   + KD  ++L   M     + R+  G  IIY  + +  +D+   LR  G+
Sbjct:   415 KNLY---ISVHSSKDMAEDLGLFMKTDEVKGRHFGGPTIIYCQTKQMVDDVNCVLRRIGV 471

Query:   102 RVSAYHAKLESN 113
             R + YHA L  N
Sbjct:   472 RSAHYHAGLTKN 483


>UNIPROTKB|Q47WD5 [details] [associations]
            symbol:CPS_4237 "RecQ domain protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] InterPro:IPR001650 InterPro:IPR002464
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514 TIGRFAMs:TIGR00614
            GO:GO:0008026 HOGENOM:HOG000044388 KO:K03654 RefSeq:YP_270887.1
            ProteinModelPortal:Q47WD5 STRING:Q47WD5 GeneID:3521770
            KEGG:cps:CPS_4237 PATRIC:21471339 OMA:GHNFRPD
            ProtClustDB:CLSK906704 BioCyc:CPSY167879:GI48-4247-MONOMER
            Uniprot:Q47WD5
        Length = 690

 Score = 164 (62.8 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
 Identities = 35/77 (45%), Positives = 48/77 (62%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK N+RFVIH+ L KS+EN+ QE GRAGRDG  + C     L  +  + + V
Sbjct:   294 TIAFGMGIDKSNIRFVIHYDLPKSIENYSQEIGRAGRDGLPSQCFTLANLDGLNTVENFV 353

Query:   175 FDQQ---TGLANLYNIV 188
             +      TG+  L N +
Sbjct:   354 YGDTPEFTGIEMLLNTI 370

 Score = 69 (29.3 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
 Identities = 16/60 (26%), Positives = 30/60 (50%)

Query:    54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             + P  Q     +L  ++S +    +GI+Y T     E + + L+ +G+   AYHA  +S+
Sbjct:   217 VLPVTQAHKNKQLEQIISAQ--QGAGIVYVTLQHSAETVAQYLKQQGINACAYHAGFDSD 274


>TIGR_CMR|CPS_4237 [details] [associations]
            symbol:CPS_4237 "RecQ domain protein" species:167879
            "Colwellia psychrerythraea 34H" [GO:0003674 "molecular_function"
            evidence=ND] [GO:0004386 "helicase activity" evidence=ISS]
            InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514 TIGRFAMs:TIGR00614
            GO:GO:0008026 HOGENOM:HOG000044388 KO:K03654 RefSeq:YP_270887.1
            ProteinModelPortal:Q47WD5 STRING:Q47WD5 GeneID:3521770
            KEGG:cps:CPS_4237 PATRIC:21471339 OMA:GHNFRPD
            ProtClustDB:CLSK906704 BioCyc:CPSY167879:GI48-4247-MONOMER
            Uniprot:Q47WD5
        Length = 690

 Score = 164 (62.8 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
 Identities = 35/77 (45%), Positives = 48/77 (62%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GIDK N+RFVIH+ L KS+EN+ QE GRAGRDG  + C     L  +  + + V
Sbjct:   294 TIAFGMGIDKSNIRFVIHYDLPKSIENYSQEIGRAGRDGLPSQCFTLANLDGLNTVENFV 353

Query:   175 FDQQ---TGLANLYNIV 188
             +      TG+  L N +
Sbjct:   354 YGDTPEFTGIEMLLNTI 370

 Score = 69 (29.3 bits), Expect = 8.5e-14, Sum P(2) = 8.5e-14
 Identities = 16/60 (26%), Positives = 30/60 (50%)

Query:    54 IKPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESN 113
             + P  Q     +L  ++S +    +GI+Y T     E + + L+ +G+   AYHA  +S+
Sbjct:   217 VLPVTQAHKNKQLEQIISAQ--QGAGIVYVTLQHSAETVAQYLKQQGINACAYHAGFDSD 274


>UNIPROTKB|Q14191 [details] [associations]
            symbol:WRN "Werner syndrome ATP-dependent helicase"
            species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0001302 "replicative cell aging" evidence=IEA] [GO:0040009
            "regulation of growth rate" evidence=IEA] [GO:0005515 "protein
            binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
            [GO:0031297 "replication fork processing" evidence=IMP;IDA]
            [GO:0005730 "nucleolus" evidence=IDA] [GO:0000723 "telomere
            maintenance" evidence=IMP] [GO:0007569 "cell aging" evidence=IMP]
            [GO:0010259 "multicellular organismal aging" evidence=IMP]
            [GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
            [GO:0007568 "aging" evidence=NAS] [GO:0003677 "DNA binding"
            evidence=IDA] [GO:0003678 "DNA helicase activity" evidence=IDA;IMP]
            [GO:0004386 "helicase activity" evidence=IDA] [GO:0008408 "3'-5'
            exonuclease activity" evidence=IDA] [GO:0042803 "protein
            homodimerization activity" evidence=IDA] [GO:0032403 "protein
            complex binding" evidence=IDA] [GO:0000731 "DNA synthesis involved
            in DNA repair" evidence=IDA] [GO:0010225 "response to UV-C"
            evidence=IDA] [GO:0006974 "response to DNA damage stimulus"
            evidence=IDA] [GO:0006260 "DNA replication" evidence=IMP]
            [GO:0032389 "MutLalpha complex" evidence=IDA] [GO:0000403 "Y-form
            DNA binding" evidence=IDA] [GO:0043138 "3'-5' DNA helicase
            activity" evidence=IDA] [GO:0000405 "bubble DNA binding"
            evidence=IDA] [GO:0009378 "four-way junction helicase activity"
            evidence=IDA] [GO:0051880 "G-quadruplex DNA binding" evidence=IDA]
            [GO:0006284 "base-excision repair" evidence=IDA] [GO:0051345
            "positive regulation of hydrolase activity" evidence=IDA]
            [GO:0006979 "response to oxidative stress" evidence=IDA]
            [GO:0005813 "centrosome" evidence=IDA] [GO:0000287 "magnesium ion
            binding" evidence=IDA] [GO:0030145 "manganese ion binding"
            evidence=IDA] [GO:0006259 "DNA metabolic process" evidence=IDA]
            [GO:0006302 "double-strand break repair" evidence=IMP] [GO:0005654
            "nucleoplasm" evidence=IDA] [GO:0071480 "cellular response to gamma
            radiation" evidence=IDA] [GO:0004527 "exonuclease activity"
            evidence=IDA] [GO:0009267 "cellular response to starvation"
            evidence=IDA] [GO:0032066 "nucleolus to nucleoplasm transport"
            evidence=IDA] [GO:0042981 "regulation of apoptotic process"
            evidence=IGI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
            catabolic process" evidence=IDA] [GO:0032508 "DNA duplex unwinding"
            evidence=IMP;IDA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00474 SMART:SM00490 SMART:SM00956 GO:GO:0005524
            GO:GO:0005813 Pathway_Interaction_DB:telomerasepathway
            GO:GO:0042803 GO:GO:0005654 GO:GO:0006979 GO:GO:0005730
            GO:GO:0042981 GO:GO:0032403 GO:GO:0000287 GO:GO:0006284
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
            GO:GO:0006310 GO:GO:0009267 GO:GO:0004003 SUPFAM:SSF53098
            MIM:114500 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345 GO:GO:0010259
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GO:GO:0000723 GO:GO:0010225 GO:GO:0007569 eggNOG:COG0514
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403
            GO:GO:0000731 GO:GO:0000405 GO:GO:0009378 GO:GO:0051880
            GO:GO:0031297 GO:GO:0043138 GO:GO:0032066 KO:K10900 EMBL:L76937
            EMBL:AY818673 EMBL:AF091214 EMBL:AF181897 EMBL:AF181896
            EMBL:AY442327 EMBL:AC084736 IPI:IPI00029107 RefSeq:NP_000544.2
            UniGene:Hs.632050 PDB:2AXL PDB:2DGZ PDB:2E1E PDB:2E1F PDB:2FBT
            PDB:2FBV PDB:2FBX PDB:2FBY PDB:2FC0 PDB:3AAF PDBsum:2AXL
            PDBsum:2DGZ PDBsum:2E1E PDBsum:2E1F PDBsum:2FBT PDBsum:2FBV
            PDBsum:2FBX PDBsum:2FBY PDBsum:2FC0 PDBsum:3AAF DisProt:DP00443
            ProteinModelPortal:Q14191 SMR:Q14191 DIP:DIP-31380N IntAct:Q14191
            MINT:MINT-95856 STRING:Q14191 PhosphoSite:Q14191 DMDM:6136393
            PaxDb:Q14191 PRIDE:Q14191 Ensembl:ENST00000298139 GeneID:7486
            KEGG:hsa:7486 UCSC:uc003xio.4 CTD:7486 GeneCards:GC08P030948
            H-InvDB:HIX0007441 HGNC:HGNC:12791 HPA:HPA028661 MIM:277700
            MIM:604611 neXtProt:NX_Q14191 Orphanet:902 PharmGKB:PA367
            HOGENOM:HOG000146447 HOVERGEN:HBG000325 InParanoid:Q14191
            OMA:GIEGDQW OrthoDB:EOG4DNF3J PhylomeDB:Q14191
            EvolutionaryTrace:Q14191 GenomeRNAi:7486 NextBio:29326 Bgee:Q14191
            CleanEx:HS_WRN Genevestigator:Q14191 GermOnline:ENSG00000165392
            Uniprot:Q14191
        Length = 1432

 Score = 172 (65.6 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
 Identities = 42/120 (35%), Positives = 66/120 (55%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C + +   D+     ++
Sbjct:   821 TIAFGMGINKADIRQVIHYGAPKDMESYYQEIGRAGRDGLQSSCHVLWAPADINLNRHLL 880

Query:   175 FDQQTGLANLYNI-----VSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHCR 223
              + +     LY +     +   L  +RCRR II S+F++        G+      CD+CR
Sbjct:   881 TEIRNEKFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQVQKASLGIMGTEKCCDNCR 940

 Score = 49 (22.3 bits), Expect = 8.6e-14, Sum P(2) = 8.6e-14
 Identities = 12/29 (41%), Positives = 14/29 (48%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHA 108
             IIY  S K  + +  ELR   L    YHA
Sbjct:   768 IIYCPSRKMTQQVTGELRKLNLSCGTYHA 796


>ZFIN|ZDB-GENE-070702-2 [details] [associations]
            symbol:wrn "Werner syndrome" species:7955 "Danio
            rerio" [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0008026
            "ATP-dependent helicase activity" evidence=IEA] [GO:0044237
            "cellular metabolic process" evidence=IEA] [GO:0003824 "catalytic
            activity" evidence=IEA] [GO:0006139 "nucleobase-containing compound
            metabolic process" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0006260 "DNA
            replication" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00474 SMART:SM00490
            SMART:SM00956 ZFIN:ZDB-GENE-070702-2 GO:GO:0005524 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:BX537303 IPI:IPI00993584
            ProteinModelPortal:E9QGF6 Ensembl:ENSDART00000136531 Uniprot:E9QGF6
        Length = 1436

 Score = 172 (65.6 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
 Identities = 42/123 (34%), Positives = 69/123 (56%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             ++AFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C + + +P    L+  +
Sbjct:   773 TVAFGMGINKSDIRKVIHYGAPKEMESYYQEIGRAGRDGLPSACHVLW-MPGDMALNKFI 831

Query:   175 FDQ-QTGLANLYNI-----VSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHC 222
              +Q ++     Y I     +   L+ T+CRR +I  +F++        G+      CD+C
Sbjct:   832 LNQSKSERFRSYKIDMMAKMEKYLNSTKCRRKLILCHFEDKRLRKVTSGILGSSQCCDNC 891

Query:   223 RGG 225
             R G
Sbjct:   892 RSG 894

 Score = 46 (21.3 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
 Identities = 12/33 (36%), Positives = 15/33 (45%)

Query:    78 SGIIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             S I+Y  S KE E +   L    +    YHA L
Sbjct:   662 SAIVYCPSKKEAERVTTALFKLDIPCGVYHAGL 694

 Score = 37 (18.1 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
 Identities = 6/19 (31%), Positives = 12/19 (63%)

Query:    80 IIYTTSIKECEDLREELRN 98
             ++Y+    +C  L E+LR+
Sbjct:    41 VVYSQERHDCSFLSEDLRS 59


>UNIPROTKB|J3KRM6 [details] [associations]
            symbol:RECQL5 "ATP-dependent DNA helicase Q5" species:9606
            "Homo sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] InterPro:IPR001650 Pfam:PF00271
            PROSITE:PS51194 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
            EMBL:AC087749 HGNC:HGNC:9950 ChiTaRS:RECQL5 Ensembl:ENST00000582464
            Uniprot:J3KRM6
        Length = 118

 Score = 163 (62.4 bits), Expect = 3.9e-12, P = 3.9e-12
 Identities = 31/57 (54%), Positives = 42/57 (73%)

Query:   118 FGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             FG+G+DK NVRFV H  ++KSM  +YQESGRAGRDG+ + C LYY   D  ++S ++
Sbjct:     2 FGMGVDKANVRFVAHWNIAKSMAGYYQESGRAGRDGKPSWCRLYYSRNDRDQVSFLI 58

 Score = 94 (38.1 bits), Expect = 0.00026, P = 0.00026
 Identities = 26/85 (30%), Positives = 42/85 (49%)

Query:    25 FGLGIDKPNVRFVIHHCLSKSMENFYQVRIKPAAQKDCLDELADLM-SRRFRNQSGIIYT 83
             FG+G+DK NVRFV H  ++KSM  +YQ   +  A +D       L  SR  R+Q   +  
Sbjct:     2 FGMGVDKANVRFVAHWNIAKSMAGYYQESGR--AGRDGKPSWCRLYYSRNDRDQVSFLIR 59

Query:    84 TSIKECEDLREELRNRGLRVSAYHA 108
               + + ++ R    +    + A+ A
Sbjct:    60 KEVAKLQEKRGNKASDKATIMAFDA 84


>MGI|MGI:109635 [details] [associations]
            symbol:Wrn "Werner syndrome homolog (human)" species:10090
            "Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000287 "magnesium ion binding" evidence=ISO] [GO:0000403
            "Y-form DNA binding" evidence=ISO] [GO:0000405 "bubble DNA binding"
            evidence=ISO] [GO:0000723 "telomere maintenance"
            evidence=ISO;IGI;IMP] [GO:0000731 "DNA synthesis involved in DNA
            repair" evidence=ISO] [GO:0001302 "replicative cell aging"
            evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678 "DNA helicase
            activity" evidence=ISO] [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
            evidence=ISO] [GO:0004386 "helicase activity" evidence=ISO]
            [GO:0004518 "nuclease activity" evidence=IEA] [GO:0004527
            "exonuclease activity" evidence=ISO] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
            [GO:0005654 "nucleoplasm" evidence=ISO;IDA] [GO:0005730 "nucleolus"
            evidence=ISO;IDA] [GO:0005813 "centrosome" evidence=ISO]
            [GO:0006139 "nucleobase-containing compound metabolic process"
            evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=ISO]
            [GO:0006259 "DNA metabolic process" evidence=ISO;IMP] [GO:0006260
            "DNA replication" evidence=ISO;IMP] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006284 "base-excision repair" evidence=ISO]
            [GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
            damage stimulus" evidence=ISO] [GO:0006979 "response to oxidative
            stress" evidence=ISO] [GO:0007569 "cell aging" evidence=ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0008152 "metabolic process" evidence=IEA] [GO:0008408 "3'-5'
            exonuclease activity" evidence=ISO;IDA] [GO:0009267 "cellular
            response to starvation" evidence=ISO] [GO:0009378 "four-way
            junction helicase activity" evidence=ISO] [GO:0010225 "response to
            UV-C" evidence=ISO] [GO:0010259 "multicellular organismal aging"
            evidence=ISO;IGI] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0016887 "ATPase activity" evidence=ISO] [GO:0030145 "manganese
            ion binding" evidence=ISO] [GO:0031297 "replication fork
            processing" evidence=ISO] [GO:0032066 "nucleolus to nucleoplasm
            transport" evidence=ISO] [GO:0032403 "protein complex binding"
            evidence=ISO] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
            [GO:0040009 "regulation of growth rate" evidence=IMP] [GO:0042803
            "protein homodimerization activity" evidence=ISO] [GO:0042981
            "regulation of apoptotic process" evidence=ISO] [GO:0043138 "3'-5'
            DNA helicase activity" evidence=ISO] [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=IEA] [GO:0044237 "cellular
            metabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0051345 "positive regulation of hydrolase
            activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA binding"
            evidence=ISO] [GO:0071480 "cellular response to gamma radiation"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
            PROSITE:PS00690 PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341
            SMART:SM00474 SMART:SM00490 SMART:SM00956 MGI:MGI:109635
            GO:GO:0005524 GO:GO:0005654 GO:GO:0005730 GO:GO:0000287
            GO:GO:0003677 GO:GO:0006260 GO:GO:0006281 Gene3D:1.10.10.10
            InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145 GO:GO:0006310
            GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408
            GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0000723 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0032066 KO:K10900 CTD:7486
            HOGENOM:HOG000146447 HOVERGEN:HBG000325 OMA:GIEGDQW
            OrthoDB:EOG4DNF3J EMBL:D86527 EMBL:D86526 EMBL:AF091215
            EMBL:AF091216 EMBL:AF241636 EMBL:AC153789 EMBL:AC115809
            EMBL:BC050921 EMBL:BC060700 IPI:IPI00113830 PIR:T17452 PIR:T30247
            RefSeq:NP_001116294.1 RefSeq:NP_035851.3 UniGene:Mm.228805 PDB:2E6L
            PDB:2E6M PDBsum:2E6L PDBsum:2E6M ProteinModelPortal:O09053
            SMR:O09053 DIP:DIP-27642N STRING:O09053 PhosphoSite:O09053
            PaxDb:O09053 PRIDE:O09053 Ensembl:ENSMUST00000033990
            Ensembl:ENSMUST00000033991 GeneID:22427 KEGG:mmu:22427
            InParanoid:Q80YP9 EvolutionaryTrace:O09053 NextBio:302865
            Bgee:O09053 CleanEx:MM_WRN Genevestigator:O09053
            GermOnline:ENSMUSG00000031583 Uniprot:O09053
        Length = 1401

 Score = 169 (64.5 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
 Identities = 43/120 (35%), Positives = 68/120 (56%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM- 173
             ++AFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C L +   D     ++ 
Sbjct:   786 TVAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTSRNLL 845

Query:   174 --VFDQQTGLANLYNIVSY--CLDQTRCRRAIIASYFDEAW---SDTECRGM---CDHCR 223
               + D++  L  L  +V     L  ++CRR II S+F++     +  +  G    CD+CR
Sbjct:   846 IEIHDEKFRLYKLKMMVKMEKYLHSSQCRRRIILSHFEDKCLQKASLDIMGTEKCCDNCR 905

 Score = 46 (21.3 bits), Expect = 5.2e-12, Sum P(2) = 5.2e-12
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
             IIY  S K  E +  EL    L    YHA ++
Sbjct:   733 IIYCPSRKMTEQVTAELGKLNLACRTYHAGMK 764

 Score = 37 (18.1 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
 Identities = 12/45 (26%), Positives = 20/45 (44%)

Query:    55 KPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNR 99
             K   QK  L++  +L    F     I+Y+    +C  L E++  R
Sbjct:    26 KACVQKSVLED--NLPFLEF--PGSIVYSYEASDCSFLSEDISMR 66

 Score = 36 (17.7 bits), Expect = 5.6e-11, Sum P(2) = 5.6e-11
 Identities = 8/34 (23%), Positives = 19/34 (55%)

Query:    64 DELADLMSRRFRNQSGIIYTTSIKECEDLREELR 97
             +E+ D + R    ++ +I + S  E +DL ++ +
Sbjct:   370 NEIEDNLLREDMERTCVIPSISENELQDLEQQAK 403


>UNIPROTKB|F1NAR0 [details] [associations]
            symbol:F1NAR0 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0043140 "ATP-dependent 3'-5' DNA helicase activity"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000287
            "magnesium ion binding" evidence=IEA] [GO:0000403 "Y-form DNA
            binding" evidence=IEA] [GO:0000405 "bubble DNA binding"
            evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
            [GO:0000731 "DNA synthesis involved in DNA repair" evidence=IEA]
            [GO:0001302 "replicative cell aging" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
            [GO:0005813 "centrosome" evidence=IEA] [GO:0006284 "base-excision
            repair" evidence=IEA] [GO:0006979 "response to oxidative stress"
            evidence=IEA] [GO:0008408 "3'-5' exonuclease activity"
            evidence=IEA] [GO:0009267 "cellular response to starvation"
            evidence=IEA] [GO:0009378 "four-way junction helicase activity"
            evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
            [GO:0010259 "multicellular organismal aging" evidence=IEA]
            [GO:0030145 "manganese ion binding" evidence=IEA] [GO:0031297
            "replication fork processing" evidence=IEA] [GO:0032066 "nucleolus
            to nucleoplasm transport" evidence=IEA] [GO:0032389 "MutLalpha
            complex" evidence=IEA] [GO:0032403 "protein complex binding"
            evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
            [GO:0042803 "protein homodimerization activity" evidence=IEA]
            [GO:0042981 "regulation of apoptotic process" evidence=IEA]
            [GO:0051345 "positive regulation of hydrolase activity"
            evidence=IEA] [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR002121 InterPro:IPR002562
            InterPro:IPR004589 InterPro:IPR010997 InterPro:IPR011545
            InterPro:IPR012337 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF01612 Pfam:PF09382 PROSITE:PS51194
            SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
            GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
            GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
            GO:GO:0008408 GO:GO:0051345 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
            GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
            GO:GO:0032066 OMA:GIEGDQW EMBL:AADN02016143 IPI:IPI01017120
            Ensembl:ENSGALT00000016720 Uniprot:F1NAR0
        Length = 1367

 Score = 166 (63.5 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
 Identities = 41/120 (34%), Positives = 66/120 (55%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVF---KLS 171
             ++AFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  A C + +   D+    +L 
Sbjct:   734 TVAFGMGINKADIRMVIHYGAPKEMESYYQEIGRAGRDGLPASCHVLWTAADLVLNRRLL 793

Query:   172 SMVFDQQTGLANLYNI--VSYCLDQTRCRRAIIASYFDEAWSDTECRGM------CDHCR 223
             + + +++  L  L  +  +   L    CR  II S+F++        G+      CD+CR
Sbjct:   794 NEIHNEKFRLYKLKMLEKMEKYLSSNSCRSRIILSHFEDKQLRKVSSGIMGTEECCDNCR 853

 Score = 54 (24.1 bits), Expect = 5.8e-12, Sum P(2) = 5.8e-12
 Identities = 13/29 (44%), Positives = 15/29 (51%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHA 108
             IIY  S K  E +  EL   G+   AYHA
Sbjct:   681 IIYCPSRKATEQVMFELNKLGVTCGAYHA 709

 Score = 37 (18.1 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 6/21 (28%), Positives = 12/21 (57%)

Query:    77 QSGIIYTTSIKECEDLREELR 97
             +  I+Y+    +C  L E++R
Sbjct:    15 RGSIVYSYEASDCSLLSEDIR 35


>UNIPROTKB|F1RX70 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
            evidence=IEA] [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0005622 "intracellular" evidence=IEA] [GO:0003676 "nucleic acid
            binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
            SMART:SM00490 SMART:SM00956 GO:GO:0005524 GO:GO:0006260
            GO:GO:0006281 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0005622 GO:GO:0006310 SUPFAM:SSF53098 GO:GO:0008408
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 EMBL:FP102088 EMBL:FP565873
            Ensembl:ENSSSCT00000017248 Uniprot:F1RX70
        Length = 1409

 Score = 166 (63.5 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 46/139 (33%), Positives = 72/139 (51%)

Query:   101 LRVSAYHAKLESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
             LR   +H  +   +     +IAFG+GI+K ++R VIH+   K +E++YQE GRAGRDG  
Sbjct:   771 LRKQVHHKFMRDEIQCVIATIAFGMGINKADIRKVIHYGAPKEIESYYQEIGRAGRDGLQ 830

Query:   156 AHCILYYRLPDVF---KLSSMVFDQQTGLANLYNIVSY--CLDQTRCRRAIIASYFDEAW 210
             + C + +   D+     L S + ++   L  L  +      L  +RCRR II S+F++  
Sbjct:   831 SSCHILWAPADINLNRHLLSEICNENFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQ 890

Query:   211 SDTECRGM------CDHCR 223
                   G+      CD+CR
Sbjct:   891 LRKASLGIMGTEKCCDNCR 909

 Score = 50 (22.7 bits), Expect = 1.6e-11, Sum P(2) = 1.6e-11
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             IIY  S K  E +  EL+   L    YHA L
Sbjct:   737 IIYCPSRKMTEQVTAELKKLKLACETYHAGL 767

 Score = 41 (19.5 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query:    45 SMENF-YQVRIKPAA-QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL 96
             +M+N  Y +  + A+ QK  L++  DL    F     I+Y+    +C  L E++
Sbjct:    20 AMQNKGYAIEKRKASIQKSVLED--DLPFLEFTGS--IVYSYEASDCSFLSEDI 69


>UNIPROTKB|I3LC91 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
            [GO:0051345 "positive regulation of hydrolase activity"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042803 "protein homodimerization activity"
            evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
            "MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
            nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
            processing" evidence=IEA] [GO:0030145 "manganese ion binding"
            evidence=IEA] [GO:0010259 "multicellular organismal aging"
            evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
            "response to oxidative stress" evidence=IEA] [GO:0006284
            "base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
            evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
            evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
            [GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
            DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
            GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
            GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
            GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
            GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
            GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
            GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:FP102088 EMBL:FP565873
            Ensembl:ENSSSCT00000022344 Uniprot:I3LC91
        Length = 1507

 Score = 166 (63.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 46/139 (33%), Positives = 72/139 (51%)

Query:   101 LRVSAYHAKLESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
             LR   +H  +   +     +IAFG+GI+K ++R VIH+   K +E++YQE GRAGRDG  
Sbjct:   870 LRKQVHHKFMRDEIQCVIATIAFGMGINKADIRKVIHYGAPKEIESYYQEIGRAGRDGLQ 929

Query:   156 AHCILYYRLPDVF---KLSSMVFDQQTGLANLYNIVSY--CLDQTRCRRAIIASYFDEAW 210
             + C + +   D+     L S + ++   L  L  +      L  +RCRR II S+F++  
Sbjct:   930 SSCHILWAPADINLNRHLLSEICNENFRLYKLKMMAKMEKYLHSSRCRRQIILSHFEDKQ 989

Query:   211 SDTECRGM------CDHCR 223
                   G+      CD+CR
Sbjct:   990 LRKASLGIMGTEKCCDNCR 1008

 Score = 50 (22.7 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKL 110
             IIY  S K  E +  EL+   L    YHA L
Sbjct:   836 IIYCPSRKMTEQVTAELKKLKLACETYHAGL 866

 Score = 41 (19.5 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
 Identities = 15/54 (27%), Positives = 27/54 (50%)

Query:    45 SMENF-YQVRIKPAA-QKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREEL 96
             +M+N  Y +  + A+ QK  L++  DL    F     I+Y+    +C  L E++
Sbjct:    20 AMQNKGYAIEKRKASIQKSVLED--DLPFLEFTGS--IVYSYEASDCSFLSEDI 69


>ASPGD|ASPL0000072255 [details] [associations]
            symbol:recQ species:162425 "Emericella nidulans"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            InterPro:IPR001650 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003676
            GO:GO:0006310 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 TIGRFAMs:TIGR00614 GO:GO:0008026
            HOGENOM:HOG000044388 ProteinModelPortal:C8V8Q7
            EnsemblFungi:CADANIAT00006022 OMA:ARPNIHY Uniprot:C8V8Q7
        Length = 541

 Score = 153 (58.9 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
 Identities = 29/50 (58%), Positives = 36/50 (72%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPD 166
             AFG+GID P VRFV+H    ++ E F QESGRAGRDG+ A  I+YY L +
Sbjct:   328 AFGMGIDNPEVRFVVHWSPPRTFEGFVQESGRAGRDGRAAASIVYYSLQE 377

 Score = 56 (24.8 bits), Expect = 7.2e-11, Sum P(2) = 7.2e-11
 Identities = 14/40 (35%), Positives = 20/40 (50%)

Query:   176 DQQTGLANLY-------NIVSYCLDQTRCRRAIIASYFDE 208
             D+ + L NLY        +V YC   TRCR  +I  +F +
Sbjct:   406 DKVSLLRNLYARKQSFEKVVRYCETTTRCRHELIKEFFGD 445


>RGD|1564788 [details] [associations]
            symbol:Wrn "Werner syndrome, RecQ helicase-like" species:10116
            "Rattus norvegicus" [GO:0000287 "magnesium ion binding"
            evidence=ISO] [GO:0000403 "Y-form DNA binding" evidence=ISO]
            [GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000723
            "telomere maintenance" evidence=ISO] [GO:0000731 "DNA synthesis
            involved in DNA repair" evidence=ISO] [GO:0001302 "replicative cell
            aging" evidence=ISO] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
            "DNA helicase activity" evidence=ISO] [GO:0004003 "ATP-dependent
            DNA helicase activity" evidence=ISO] [GO:0004386 "helicase
            activity" evidence=ISO] [GO:0004527 "exonuclease activity"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005622
            "intracellular" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005654 "nucleoplasm" evidence=ISO] [GO:0005730 "nucleolus"
            evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0006200
            "ATP catabolic process" evidence=ISO] [GO:0006259 "DNA metabolic
            process" evidence=ISO] [GO:0006260 "DNA replication"
            evidence=IEA;ISO] [GO:0006281 "DNA repair" evidence=IEA]
            [GO:0006284 "base-excision repair" evidence=ISO] [GO:0006302
            "double-strand break repair" evidence=ISO] [GO:0006310 "DNA
            recombination" evidence=IEA] [GO:0006974 "response to DNA damage
            stimulus" evidence=ISO] [GO:0006979 "response to oxidative stress"
            evidence=ISO] [GO:0007569 "cell aging" evidence=ISO] [GO:0008408
            "3'-5' exonuclease activity" evidence=IEA;ISO] [GO:0009267
            "cellular response to starvation" evidence=ISO] [GO:0009378
            "four-way junction helicase activity" evidence=ISO] [GO:0010225
            "response to UV-C" evidence=ISO] [GO:0010259 "multicellular
            organismal aging" evidence=ISO] [GO:0016887 "ATPase activity"
            evidence=ISO] [GO:0030145 "manganese ion binding" evidence=ISO]
            [GO:0031297 "replication fork processing" evidence=ISO] [GO:0032066
            "nucleolus to nucleoplasm transport" evidence=ISO] [GO:0032403
            "protein complex binding" evidence=ISO] [GO:0032508 "DNA duplex
            unwinding" evidence=ISO] [GO:0040009 "regulation of growth rate"
            evidence=ISO] [GO:0042803 "protein homodimerization activity"
            evidence=ISO] [GO:0042981 "regulation of apoptotic process"
            evidence=ISO] [GO:0043138 "3'-5' DNA helicase activity"
            evidence=ISO] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0051345 "positive regulation of
            hydrolase activity" evidence=ISO] [GO:0051880 "G-quadruplex DNA
            binding" evidence=ISO] [GO:0071480 "cellular response to gamma
            radiation" evidence=ISO] [GO:0032389 "MutLalpha complex"
            evidence=ISO] InterPro:IPR001650 InterPro:IPR002121
            InterPro:IPR002562 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR012337 InterPro:IPR018982
            Pfam:PF00270 Pfam:PF00271 Pfam:PF00570 Pfam:PF01612 Pfam:PF09382
            PROSITE:PS50967 PROSITE:PS51194 SMART:SM00341 SMART:SM00474
            SMART:SM00490 SMART:SM00956 RGD:1564788 GO:GO:0005524 GO:GO:0005813
            GO:GO:0005654 GO:GO:0006979 GO:GO:0005730 GO:GO:0042981
            GO:GO:0000287 GO:GO:0006284 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0001302 GO:GO:0030145 GO:GO:0006310 GO:GO:0009267
            SUPFAM:SSF53098 GO:GO:0040009 GO:GO:0008408 GO:GO:0051345
            GO:GO:0010259 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043140 GO:GO:0000723 GO:GO:0010225
            GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731 GO:GO:0000405
            GO:GO:0009378 GO:GO:0051880 GO:GO:0031297 GO:GO:0032389
            GO:GO:0032066 IPI:IPI00960063 ProteinModelPortal:F1LTH9
            Ensembl:ENSRNOT00000058805 Uniprot:F1LTH9
        Length = 1448

 Score = 164 (62.8 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 45/123 (36%), Positives = 66/123 (53%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMV 174
             +IAFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  + C L +   D     + +
Sbjct:   834 TIAFGMGINKADIRKVIHYGAPKEMESYYQEIGRAGRDGLQSSCHLLWAPADFNTTRNRL 893

Query:   175 FDQQTGLANLYNI-----VSYCLDQTRCRRAIIASYFDE--------AWSDTE-CRGMCD 220
              +       L+ +     +   L  +RCRR II S+F++        A   TE C   CD
Sbjct:   894 IEIHNEKFRLHKLKMMVKMEKYLHSSRCRRQIILSHFEDKRLQKASLAVMGTEKC---CD 950

Query:   221 HCR 223
             +CR
Sbjct:   951 NCR 953

 Score = 47 (21.6 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLE 111
             IIY  S K  E +  EL    +   AYHA ++
Sbjct:   781 IIYCPSRKVTEQVTVELGKLNVACQAYHAGMK 812


>UNIPROTKB|E1BEE6 [details] [associations]
            symbol:WRN "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0051880 "G-quadruplex DNA binding" evidence=IEA]
            [GO:0051345 "positive regulation of hydrolase activity"
            evidence=IEA] [GO:0042981 "regulation of apoptotic process"
            evidence=IEA] [GO:0042803 "protein homodimerization activity"
            evidence=IEA] [GO:0040009 "regulation of growth rate" evidence=IEA]
            [GO:0032403 "protein complex binding" evidence=IEA] [GO:0032389
            "MutLalpha complex" evidence=IEA] [GO:0032066 "nucleolus to
            nucleoplasm transport" evidence=IEA] [GO:0031297 "replication fork
            processing" evidence=IEA] [GO:0030145 "manganese ion binding"
            evidence=IEA] [GO:0010259 "multicellular organismal aging"
            evidence=IEA] [GO:0010225 "response to UV-C" evidence=IEA]
            [GO:0009378 "four-way junction helicase activity" evidence=IEA]
            [GO:0009267 "cellular response to starvation" evidence=IEA]
            [GO:0008408 "3'-5' exonuclease activity" evidence=IEA] [GO:0006979
            "response to oxidative stress" evidence=IEA] [GO:0006284
            "base-excision repair" evidence=IEA] [GO:0005813 "centrosome"
            evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0001302 "replicative cell aging"
            evidence=IEA] [GO:0000731 "DNA synthesis involved in DNA repair"
            evidence=IEA] [GO:0000723 "telomere maintenance" evidence=IEA]
            [GO:0000405 "bubble DNA binding" evidence=IEA] [GO:0000403 "Y-form
            DNA binding" evidence=IEA] [GO:0000287 "magnesium ion binding"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
            [GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF01612 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00341 SMART:SM00474 SMART:SM00490 SMART:SM00956
            GO:GO:0005524 GO:GO:0005813 GO:GO:0005654 GO:GO:0006979
            GO:GO:0005730 GO:GO:0042981 GO:GO:0000287 GO:GO:0006284
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0001302 GO:GO:0030145
            GO:GO:0006310 GO:GO:0009267 SUPFAM:SSF53098 GO:GO:0040009
            GO:GO:0008408 GO:GO:0051345 GO:GO:0010259 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000723
            GO:GO:0010225 GeneTree:ENSGT00550000074520 Gene3D:1.10.150.80
            SUPFAM:SSF47819 TIGRFAMs:TIGR00614 GO:GO:0000403 GO:GO:0000731
            GO:GO:0000405 GO:GO:0009378 GO:GO:0051880 GO:GO:0031297
            GO:GO:0032389 GO:GO:0032066 OMA:GIEGDQW EMBL:DAAA02060458
            EMBL:DAAA02060459 EMBL:DAAA02060460 EMBL:DAAA02060461
            EMBL:DAAA02060462 EMBL:DAAA02060463 EMBL:DAAA02060464
            EMBL:DAAA02060465 EMBL:DAAA02060466 EMBL:DAAA02060467
            EMBL:DAAA02060468 EMBL:DAAA02060469 EMBL:DAAA02060470
            EMBL:DAAA02060471 EMBL:DAAA02060472 EMBL:DAAA02060473
            EMBL:DAAA02060474 EMBL:DAAA02060475 EMBL:DAAA02060476
            EMBL:DAAA02060477 EMBL:DAAA02060478 EMBL:DAAA02060479
            EMBL:DAAA02060480 EMBL:DAAA02060481 EMBL:DAAA02060482
            EMBL:DAAA02060483 EMBL:DAAA02060484 EMBL:DAAA02060485
            EMBL:DAAA02060486 EMBL:DAAA02060487 EMBL:DAAA02060488
            EMBL:DAAA02060489 EMBL:DAAA02060490 EMBL:DAAA02060491
            EMBL:DAAA02060492 EMBL:DAAA02060493 EMBL:DAAA02060494
            IPI:IPI00920936 Ensembl:ENSBTAT00000028778 Uniprot:E1BEE6
        Length = 1404

 Score = 159 (61.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 42/139 (30%), Positives = 72/139 (51%)

Query:   101 LRVSAYHAKLESNV-----SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQI 155
             LR   +H  +   +     ++AFG+GI+K ++R VIH+   K ME++YQE GRAGRDG  
Sbjct:   769 LRKQVHHRFMRDEIQCVIATVAFGMGINKADIRQVIHYGAPKEMESYYQEIGRAGRDGLQ 828

Query:   156 AHCILYYRLPDVFKLSSMVFDQQTGLANLYNI-----VSYCLDQTRCRRAIIASYFDEAW 210
             + C + +   D+     ++ + +     LY +     +   L  ++CRR II S+F++  
Sbjct:   829 SSCHVLWAPADMNLNRCLLSEIRNEKFRLYKLKMMGKMEKYLYSSKCRRQIILSHFEDKQ 888

Query:   211 SDTECRGM------CDHCR 223
                   G+      CD+C+
Sbjct:   889 LRKASVGIMGTENCCDNCK 907

 Score = 55 (24.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query:    80 IIYTTSIKECEDLREELRNRGLRVSAYHAKLESNV 114
             IIY  S K  E +  EL+   L    YHA L  N+
Sbjct:   735 IIYCPSRKMTEQVTAELKKLKLACGTYHAGLSINL 769


>UNIPROTKB|O93530 [details] [associations]
            symbol:wrn "Werner syndrome ATP-dependent helicase homolog"
            species:8355 "Xenopus laevis" [GO:0000287 "magnesium ion binding"
            evidence=ISS] [GO:0006259 "DNA metabolic process" evidence=ISS]
            [GO:0008408 "3'-5' exonuclease activity" evidence=ISS] [GO:0030145
            "manganese ion binding" evidence=ISS] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR002562 InterPro:IPR004589
            InterPro:IPR010997 InterPro:IPR011545 InterPro:IPR012337
            InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271 Pfam:PF00570
            Pfam:PF01612 Pfam:PF09382 PROSITE:PS00690 PROSITE:PS50967
            PROSITE:PS51194 SMART:SM00341 SMART:SM00474 SMART:SM00490
            SMART:SM00956 GO:GO:0005524 GO:GO:0005634 GO:GO:0000287
            GO:GO:0003677 GO:GO:0006260 GO:GO:0006259 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0030145 GO:GO:0006310
            SUPFAM:SSF53098 GO:GO:0008408 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0043140 Gene3D:1.10.150.80 SUPFAM:SSF47819
            TIGRFAMs:TIGR00614 KO:K10900 CTD:7486 HOVERGEN:HBG000325
            EMBL:AF067418 PIR:T14895 RefSeq:NP_001081838.1 UniGene:Xl.404
            ProteinModelPortal:O93530 SMR:O93530 GeneID:398079 KEGG:xla:398079
            Xenbase:XB-GENE-992879 Uniprot:O93530
        Length = 1436

 Score = 166 (63.5 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 47/143 (32%), Positives = 76/143 (53%)

Query:    93 REELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
             R E+ +R +R    H  +    ++AFG+GI+KP++R VIH+   K ME++YQE GRAGRD
Sbjct:   746 RREVHHRFMR-DEIHCVV---ATVAFGMGINKPDIRKVIHYGAPKEMESYYQEIGRAGRD 801

Query:   153 GQIAHCILYYRLPDVFKLSSMVFD------QQTGLANLYNIVSYCLDQTRCRRAIIASYF 206
             G  + C   +   D+     M+ +      ++  L  L  +  Y L+ + CRR II S+F
Sbjct:   802 GLPSCCHALWAQADMNFNRHMLGEIPNKGFREYKLKMLTKMEKY-LNSSTCRRKIILSHF 860

Query:   207 DEAWSDTECRGM------CDHCR 223
             ++        G+      CD+C+
Sbjct:   861 EDKQLRKASSGIMGTEKCCDNCK 883

 Score = 39 (18.8 bits), Expect = 2.3e-10, Sum P(2) = 2.3e-10
 Identities = 13/44 (29%), Positives = 24/44 (54%)

Query:    55 KPAAQKDCLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRN 98
             K   +K+ L++    M  +F N S I+Y+    +C  L E++R+
Sbjct:    26 KSFCKKNILEDNLPFM--KF-NGS-IVYSYESNDCSLLSEDIRS 65


>DICTYBASE|DDB_G0268512 [details] [associations]
            symbol:wrn "Werner syndrome protein" species:44689
            "Dictyostelium discoideum" [GO:0044237 "cellular metabolic process"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006260
            "DNA replication" evidence=IEA] [GO:0005622 "intracellular"
            evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0003824 "catalytic activity"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001650
            InterPro:IPR002121 InterPro:IPR004589 InterPro:IPR010997
            InterPro:IPR011545 InterPro:IPR018982 Pfam:PF00270 Pfam:PF00271
            Pfam:PF00570 Pfam:PF09382 PROSITE:PS50967 PROSITE:PS51194
            SMART:SM00490 SMART:SM00956 dictyBase:DDB_G0268512 GO:GO:0005524
            GenomeReviews:CM000150_GR GO:GO:0006260 GO:GO:0006281
            EMBL:AAFI02000003 Gene3D:1.10.10.10 InterPro:IPR011991
            GO:GO:0003676 GO:GO:0005622 GO:GO:0006310 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 eggNOG:COG0514
            Gene3D:1.10.150.80 SUPFAM:SSF47819 TIGRFAMs:TIGR00614
            RefSeq:XP_001732947.1 ProteinModelPortal:B0G0Y4
            EnsemblProtists:DDB0238429 GeneID:8616084 KEGG:ddi:DDB_G0268512
            OMA:FLFNKTE Uniprot:B0G0Y4
        Length = 1136

 Score = 160 (61.4 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
 Identities = 38/84 (45%), Positives = 57/84 (67%)

Query:    92 LREELRNRGLRVSAYHAKLESNVS-IAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAG 150
             L ++ R+  L+   ++ K E  V+ IAFG+GIDK +VR +I++  SKS+E+FYQESGRAG
Sbjct:   558 LGDKQRDETLKNFLFN-KTEVIVATIAFGMGIDKHDVRLIINYGASKSVEDFYQESGRAG 616

Query:   151 RDGQIAHCILYYRLPDVFKLSSMV 174
             RDG  +  ++ Y L D  K S ++
Sbjct:   617 RDGLQSLSLIIYSLQDFVKSSFLL 640

 Score = 45 (20.9 bits), Expect = 5.9e-10, Sum P(2) = 5.9e-10
 Identities = 9/34 (26%), Positives = 19/34 (55%)

Query:   192 LDQTRCRRAIIASYFDEAW---SDTECRGMCDHC 222
             +++ +CRR ++   F E +   ++  C   CD+C
Sbjct:   694 INKVKCRRQMLLEAFGEEFIIDANNGCAS-CDNC 726


>UNIPROTKB|D4A4N2 [details] [associations]
            symbol:Recql "ATP-dependent DNA helicase Q1" species:10116
            "Rattus norvegicus" [GO:0006260 "DNA replication" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=IEA] InterPro:IPR018982
            Pfam:PF09382 RGD:1311071 GO:GO:0006260 GO:GO:0006281
            Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0043140 IPI:IPI00394214
            Ensembl:ENSRNOT00000031754 ArrayExpress:D4A4N2 Uniprot:D4A4N2
        Length = 214

 Score = 142 (55.0 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 24/50 (48%), Positives = 33/50 (66%)

Query:   173 MVFDQQTGLANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHC 222
             MV  +  G   LY +VSYC + ++CRRA+IA +FDE W+   C  MCD+C
Sbjct:     1 MVVMENVGQQKLYEMVSYCQNISKCRRALIAQHFDEVWNADACNKMCDNC 50


>UNIPROTKB|Q47ZX4 [details] [associations]
            symbol:CPS_2945 "Putative DEAD/DEAH box helicase"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 eggNOG:COG0514 GO:GO:0008026 RefSeq:YP_269645.1
            ProteinModelPortal:Q47ZX4 STRING:Q47ZX4 GeneID:3520230
            KEGG:cps:CPS_2945 PATRIC:21468917 OMA:AFGVGMD
            ProtClustDB:CLSK938184 BioCyc:CPSY167879:GI48-2994-MONOMER
            Uniprot:Q47ZX4
        Length = 843

 Score = 140 (54.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC-ILYY--RLPDVFKLSS 172
             AFG+G+DK NV+ VIH C+  +++ +YQE GRAGRDG+ A   ++YY  +L    K++S
Sbjct:   440 AFGVGMDKSNVKSVIHACIPDNIDRYYQEIGRAGRDGEAATSEVIYYNKQLAKAKKINS 498

 Score = 48 (22.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query:    80 IIYTTSIKECEDLREELRNRGL-RVSAYHAKLE 111
             I+YTT +++  DL   L+  GL R++ ++ K +
Sbjct:   384 ILYTTLVQDSIDLSCHLKAIGLNRIALFNGKTD 416


>TIGR_CMR|CPS_2945 [details] [associations]
            symbol:CPS_2945 "putative DEAD/DEAH box helicase"
            species:167879 "Colwellia psychrerythraea 34H" [GO:0008026
            "ATP-dependent helicase activity" evidence=ISS] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
            GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 eggNOG:COG0514 GO:GO:0008026 RefSeq:YP_269645.1
            ProteinModelPortal:Q47ZX4 STRING:Q47ZX4 GeneID:3520230
            KEGG:cps:CPS_2945 PATRIC:21468917 OMA:AFGVGMD
            ProtClustDB:CLSK938184 BioCyc:CPSY167879:GI48-2994-MONOMER
            Uniprot:Q47ZX4
        Length = 843

 Score = 140 (54.3 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 28/59 (47%), Positives = 42/59 (71%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHC-ILYY--RLPDVFKLSS 172
             AFG+G+DK NV+ VIH C+  +++ +YQE GRAGRDG+ A   ++YY  +L    K++S
Sbjct:   440 AFGVGMDKSNVKSVIHACIPDNIDRYYQEIGRAGRDGEAATSEVIYYNKQLAKAKKINS 498

 Score = 48 (22.0 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
 Identities = 11/33 (33%), Positives = 21/33 (63%)

Query:    80 IIYTTSIKECEDLREELRNRGL-RVSAYHAKLE 111
             I+YTT +++  DL   L+  GL R++ ++ K +
Sbjct:   384 ILYTTLVQDSIDLSCHLKAIGLNRIALFNGKTD 416


>TAIR|locus:2029799 [details] [associations]
            symbol:AT1G27880 species:3702 "Arabidopsis thaliana"
            [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
            "helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006310
            "DNA recombination" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA;ISS] [GO:0042631 "cellular response
            to water deprivation" evidence=IEP] [GO:0006260 "DNA replication"
            evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
            [GO:0008283 "cell proliferation" evidence=RCA] [GO:0051567 "histone
            H3-K9 methylation" evidence=RCA] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
            GO:GO:0005634 GO:GO:0003676 EMBL:AC079280 GO:GO:0006310
            GO:GO:0042631 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            eggNOG:COG0514 TIGRFAMs:TIGR00614 GO:GO:0008026 HSSP:P15043
            HOGENOM:HOG000264957 KO:K10730 EMBL:AJ421618 EMBL:AK226619
            IPI:IPI00519923 RefSeq:NP_174109.2 UniGene:At.40984
            ProteinModelPortal:Q0WVW7 SMR:Q0WVW7 PaxDb:Q0WVW7 PRIDE:Q0WVW7
            EnsemblPlants:AT1G27880.1 GeneID:839681 KEGG:ath:AT1G27880
            KEGG:dosa:Os04t0486800-01 TAIR:At1g27880 InParanoid:Q0WVW7
            OMA:THFWGRY PhylomeDB:Q0WVW7 ProtClustDB:CLSN2680265
            Genevestigator:Q0WVW7 Uniprot:Q0WVW7
        Length = 911

 Score = 146 (56.5 bits), Expect = 1.9e-07, P = 1.9e-07
 Identities = 28/59 (47%), Positives = 41/59 (69%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSM 173
             ++AFG+G+DK +V  VIH  +  SME + QE GRAGRDG++++C L+Y      KL S+
Sbjct:   543 TVAFGMGLDKGDVGAVIHFSVPGSMEEYVQEIGRAGRDGRLSYCHLFYDNDTYLKLRSL 601


>UNIPROTKB|F1RSP7 [details] [associations]
            symbol:RECQL4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            GO:GO:0006310 Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00550000074520
            TIGRFAMs:TIGR00614 GO:GO:0008026 InterPro:IPR021110 Pfam:PF11719
            EMBL:CU468594 Ensembl:ENSSSCT00000006477 Uniprot:F1RSP7
        Length = 1204

 Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDGQ AHC L+ R
Sbjct:   780 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLR 828


>UNIPROTKB|K7GSZ9 [details] [associations]
            symbol:RECQL4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            InterPro:IPR021110 Pfam:PF11719 EMBL:CU468594
            Ensembl:ENSSSCT00000036186 Uniprot:K7GSZ9
        Length = 1209

 Score = 146 (56.5 bits), Expect = 2.7e-07, P = 2.7e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDGQ AHC L+ R
Sbjct:   785 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLR 833


>UNIPROTKB|F1RV44 [details] [associations]
            symbol:RECQL4 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0048705 "skeletal system morphogenesis" evidence=IEA]
            [GO:0045875 "negative regulation of sister chromatid cohesion"
            evidence=IEA] [GO:0043473 "pigmentation" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
            activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008284 GO:GO:0008270
            GO:GO:0003676 GO:GO:0006310 Gene3D:4.10.60.10 SUPFAM:SSF57756
            GO:GO:0048705 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043473 GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614
            GO:GO:0008026 GO:GO:0045875 InterPro:IPR021110 Pfam:PF11719
            OMA:DMPEEAI EMBL:CU468594 Ensembl:ENSSSCT00000006463 Uniprot:F1RV44
        Length = 1227

 Score = 146 (56.5 bits), Expect = 2.8e-07, P = 2.8e-07
 Identities = 27/49 (55%), Positives = 37/49 (75%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDGQ AHC L+ R
Sbjct:   803 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLFLR 851


>RGD|1307732 [details] [associations]
            symbol:Recql4 "RecQ protein-like 4" species:10116 "Rattus
            norvegicus" [GO:0000405 "bubble DNA binding" evidence=ISO]
            [GO:0000733 "DNA strand renaturation" evidence=ISO] [GO:0001501
            "skeletal system development" evidence=ISO] [GO:0003674
            "molecular_function" evidence=ND] [GO:0003676 "nucleic acid
            binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISO]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0006260 "DNA
            replication" evidence=ISO] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
            regulation of cell proliferation" evidence=IEA;ISO] [GO:0032508
            "DNA duplex unwinding" evidence=ISO] [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=ISO] [GO:0043473
            "pigmentation" evidence=IEA;ISO] [GO:0045875 "negative regulation
            of sister chromatid cohesion" evidence=IEA;ISO] [GO:0048705
            "skeletal system morphogenesis" evidence=IEA;ISO]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            RGD:1307732 GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003676
            GO:GO:0006310 Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00550000074520
            TIGRFAMs:TIGR00614 GO:GO:0008026 InterPro:IPR021110 Pfam:PF11719
            IPI:IPI00366433 Ensembl:ENSRNOT00000045135 UCSC:RGD:1307732
            ArrayExpress:D4A5W5 Uniprot:D4A5W5
        Length = 1216

 Score = 145 (56.1 bits), Expect = 3.6e-07, P = 3.6e-07
 Identities = 32/85 (37%), Positives = 48/85 (56%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLP--DVFKLSS 172
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDG+ AHC L+      D+++LS 
Sbjct:   793 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAIGRAGRDGKPAHCHLFLHPQGEDLWELSR 852

Query:   173 MVFDQQTGLANLYNIVSYCLDQTRC 197
              V    T    +  +V        C
Sbjct:   853 HVHADSTDFLAVKKLVQRVFPACSC 877


>FB|FBgn0040290 [details] [associations]
            symbol:RecQ4 "RecQ4" species:7227 "Drosophila melanogaster"
            [GO:0004386 "helicase activity" evidence=ISS] [GO:0003678 "DNA
            helicase activity" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008094 "DNA-dependent
            ATPase activity" evidence=ISS;IDA] [GO:0006281 "DNA repair"
            evidence=ISS] [GO:0006260 "DNA replication" evidence=ISS;IMP]
            [GO:0006302 "double-strand break repair" evidence=IMP] [GO:0008284
            "positive regulation of cell proliferation" evidence=IMP]
            [GO:0048477 "oogenesis" evidence=IMP] [GO:0045740 "positive
            regulation of DNA replication" evidence=IMP] [GO:0010971 "positive
            regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
            [GO:0006284 "base-excision repair" evidence=IMP] [GO:0051301 "cell
            division" evidence=IMP] [GO:0002164 "larval development"
            evidence=IMP] [GO:0007307 "eggshell chorion gene amplification"
            evidence=IMP] [GO:0036292 "DNA rewinding" evidence=IDA] [GO:0003697
            "single-stranded DNA binding" evidence=IDA] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=IDA]
            [GO:0032508 "DNA duplex unwinding" evidence=IDA] [GO:0007095
            "mitotic G2 DNA damage checkpoint" evidence=IGI;IMP]
            InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR004589
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
            GO:GO:0007095 EMBL:AE014296 GO:GO:0051301 GO:GO:0010971
            GO:GO:0006284 GO:GO:0008284 GO:GO:0006260 GO:GO:0008270
            GO:GO:0006310 GO:GO:0003697 GO:GO:0006302 GO:GO:0045740
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0007307
            GO:GO:0002164 HSSP:P15043 KO:K10730 InterPro:IPR021110 Pfam:PF11719
            GO:GO:0036292 FlyBase:FBgn0040290 RefSeq:NP_652607.1
            UniGene:Dm.1556 ProteinModelPortal:Q9VSE6 SMR:Q9VSE6 IntAct:Q9VSE6
            PRIDE:Q9VSE6 EnsemblMetazoa:FBtr0076729 GeneID:53438
            KEGG:dme:Dmel_CG7487 UCSC:CG7487-RA CTD:53438 InParanoid:Q9VSE6
            OMA:GMPASRR PhylomeDB:Q9VSE6 GenomeRNAi:53438 NextBio:841159
            ArrayExpress:Q9VSE6 Bgee:Q9VSE6 Uniprot:Q9VSE6
        Length = 1579

 Score = 143 (55.4 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 25/47 (53%), Positives = 38/47 (80%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
             +IAFG+GI+KP++R VIH+ + ++ E++ QE GRAGRDG  +HC L+
Sbjct:  1170 TIAFGMGINKPDIRAVIHYNMPRNFESYVQEIGRAGRDGLPSHCHLF 1216

 Score = 45 (20.9 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
 Identities = 14/30 (46%), Positives = 16/30 (53%)

Query:    69 LMSRRFRN-QSGIIYTTSIKECEDLREELR 97
             L S RF   QS IIY T   ECE +   +R
Sbjct:  1087 LNSERFEPCQSIIIYCTRRDECERIAGFIR 1116

 Score = 37 (18.1 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
 Identities = 19/61 (31%), Positives = 28/61 (45%)

Query:    62 CLDELADLMSRRFRNQSGIIYTTSIKECEDLREELRNRGLRVSAYHAKLESNVSIAFGLG 121
             C+DE A  +S+   N       + +  C+ LR+ L  R +      A L + VSI   LG
Sbjct:   997 CIDE-AHCVSQWSHN----FRPSYLMICKVLRKNLGVRTVLGLTATATLPTRVSIINHLG 1051

Query:   122 I 122
             I
Sbjct:  1052 I 1052


>UNIPROTKB|H9KZS5 [details] [associations]
            symbol:H9KZS5 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
            [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
            binding" evidence=IEA] [GO:0008284 "positive regulation of cell
            proliferation" evidence=IEA] [GO:0043473 "pigmentation"
            evidence=IEA] [GO:0045875 "negative regulation of sister chromatid
            cohesion" evidence=IEA] [GO:0048705 "skeletal system morphogenesis"
            evidence=IEA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0004386
            InterPro:IPR014001 PROSITE:PS51192 GeneTree:ENSGT00550000074520
            EMBL:AADN02044351 EMBL:AADN02044352 EMBL:AADN02044353
            Ensembl:ENSGALT00000018179 OMA:CATREST Uniprot:H9KZS5
        Length = 252

 Score = 133 (51.9 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 23/47 (48%), Positives = 37/47 (78%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
             ++AFG+G+DK +VR V+H+ + ++ E++ QE GRAGRDG+ A C L+
Sbjct:   202 TVAFGMGLDKADVRAVLHYNMPRNFESYVQEIGRAGRDGEPAWCHLF 248


>UNIPROTKB|O94761 [details] [associations]
            symbol:RECQL4 "ATP-dependent DNA helicase Q4" species:9606
            "Homo sapiens" [GO:0006310 "DNA recombination" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0032508
            "DNA duplex unwinding" evidence=IDA] [GO:0043140 "ATP-dependent
            3'-5' DNA helicase activity" evidence=IMP] [GO:0000733 "DNA strand
            renaturation" evidence=IDA] [GO:0000405 "bubble DNA binding"
            evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0006260
            "DNA replication" evidence=IDA] [GO:0006281 "DNA repair"
            evidence=TAS] [GO:0007275 "multicellular organismal development"
            evidence=TAS] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS00690 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0007275 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
            GO:GO:0006260 GO:GO:0008270 GO:GO:0006281 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            eggNOG:COG0514 TIGRFAMs:TIGR00614 GO:GO:0000733 GO:GO:0000405
            EMBL:AB006532 EMBL:AB026546 EMBL:DQ176868 EMBL:BC011602
            EMBL:BC013277 IPI:IPI00014925 RefSeq:NP_004251.3 UniGene:Hs.31442
            PDB:2KMU PDBsum:2KMU ProteinModelPortal:O94761 SMR:O94761
            DIP:DIP-48475N IntAct:O94761 MINT:MINT-1432307 STRING:O94761
            PhosphoSite:O94761 PaxDb:O94761 PRIDE:O94761 GeneID:9401
            KEGG:hsa:9401 UCSC:uc003zdj.3 CTD:9401 GeneCards:GC08M145738
            HGNC:HGNC:9949 MIM:218600 MIM:266280 MIM:268400 MIM:603780
            neXtProt:NX_O94761 Orphanet:1225 Orphanet:3021 Orphanet:221016
            PharmGKB:PA34316 HOGENOM:HOG000264957 HOVERGEN:HBG065925
            InParanoid:O94761 KO:K10730 EvolutionaryTrace:O94761
            GenomeRNAi:9401 NextBio:35219 CleanEx:HS_RECQL4
            Genevestigator:O94761 GermOnline:ENSG00000160957 InterPro:IPR021110
            Pfam:PF11719 Uniprot:O94761
        Length = 1208

 Score = 142 (55.0 bits), Expect = 8.3e-07, P = 8.3e-07
 Identities = 26/47 (55%), Positives = 36/47 (76%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDGQ AHC L+
Sbjct:   771 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAVGRAGRDGQPAHCHLF 817


>UNIPROTKB|A5D786 [details] [associations]
            symbol:RECQL4 "RECQL4 protein" species:9913 "Bos taurus"
            [GO:0048705 "skeletal system morphogenesis" evidence=IEA]
            [GO:0045875 "negative regulation of sister chromatid cohesion"
            evidence=IEA] [GO:0043473 "pigmentation" evidence=IEA] [GO:0008284
            "positive regulation of cell proliferation" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
            helicase activity" evidence=IEA] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
            InterPro:IPR001650 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
            GO:GO:0005524 GO:GO:0008284 GO:GO:0003676 GO:GO:0006310
            GO:GO:0048705 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0043473 eggNOG:COG0514 GeneTree:ENSGT00550000074520
            TIGRFAMs:TIGR00614 GO:GO:0008026 GO:GO:0045875 CTD:9401
            HOGENOM:HOG000264957 HOVERGEN:HBG065925 KO:K10730
            InterPro:IPR021110 Pfam:PF11719 OrthoDB:EOG4CJVGG EMBL:DAAA02037439
            EMBL:BC140466 IPI:IPI00852560 RefSeq:NP_001091506.1
            UniGene:Bt.27882 STRING:A5D786 Ensembl:ENSBTAT00000056581
            GeneID:515472 KEGG:bta:515472 OMA:DMPEEAI NextBio:20871839
            Uniprot:A5D786
        Length = 1218

 Score = 145 (56.1 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
 Identities = 27/49 (55%), Positives = 36/49 (73%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYR 163
             ++AFG+G+D+P+VR V+H  L  S E + Q  GRAGRDGQ AHC L+ R
Sbjct:   785 TVAFGMGLDRPDVRAVLHLGLPPSFETYVQAVGRAGRDGQPAHCHLFLR 833

 Score = 36 (17.7 bits), Expect = 9.6e-07, Sum P(2) = 9.6e-07
 Identities = 8/15 (53%), Positives = 8/15 (53%)

Query:    65 ELADLMSRRFRNQSG 79
             EL     R FR QSG
Sbjct:     9 ELLQAWERAFRRQSG 23


>TIGR_CMR|BA_1505 [details] [associations]
            symbol:BA_1505 "ATP-dependent DNA helicase RecQ"
            species:198094 "Bacillus anthracis str. Ames" [GO:0004003
            "ATP-dependent DNA helicase activity" evidence=ISS] [GO:0006310
            "DNA recombination" evidence=ISS] InterPro:IPR001650
            InterPro:IPR002464 InterPro:IPR004589 InterPro:IPR011545
            Pfam:PF00270 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 EMBL:AE016879 EMBL:AE017334
            EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
            GenomeReviews:AE017334_GR GO:GO:0003676 GO:GO:0006310
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 TIGRFAMs:TIGR00614
            GO:GO:0008026 HSSP:P15043 HOGENOM:HOG000044388 KO:K03654
            OMA:DALIIMP RefSeq:NP_843957.1 RefSeq:YP_018128.2
            RefSeq:YP_027663.1 ProteinModelPortal:Q81SY8 DNASU:1087356
            EnsemblBacteria:EBBACT00000009666 EnsemblBacteria:EBBACT00000015103
            EnsemblBacteria:EBBACT00000023330 GeneID:1087356 GeneID:2817068
            GeneID:2848363 KEGG:ban:BA_1505 KEGG:bar:GBAA_1505 KEGG:bat:BAS1394
            ProtClustDB:CLSK916267 BioCyc:BANT260799:GJAJ-1468-MONOMER
            BioCyc:BANT261594:GJ7F-1530-MONOMER Uniprot:Q81SY8
        Length = 509

 Score = 109 (43.4 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
 Identities = 20/44 (45%), Positives = 31/44 (70%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCIL 160
             AFG+G++K N R++IH     ++ ++ QE GRAGRDG+ +  IL
Sbjct:   287 AFGMGVNKANTRYIIHFHYPTNIASYLQEIGRAGRDGEPSIAIL 330

 Score = 56 (24.8 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query:    79 GIIYTTSIKECEDLREELRNRGLR-VSAYHAKLE 111
             GI+Y +S    E L E LR +G+  V+ YH  +E
Sbjct:   230 GIVYCSSRAWTERLTEYLRGKGVTGVAFYHGGME 263

 Score = 47 (21.6 bits), Expect = 1.2e-06, Sum P(3) = 1.2e-06
 Identities = 13/50 (26%), Positives = 22/50 (44%)

Query:   182 ANLYNIVSYCLDQTRCRRAIIASYFDEAWSDTECRGMCDHCRGGRRDAKR 231
             + L N+ S+ +    CRR  +   F     + E    CD+C   + D K+
Sbjct:   435 SELENMKSW-IQVKGCRREYVLQQFGYR-KEQELMNCCDYCGITKEDYKK 482


>UNIPROTKB|Q4JNX8 [details] [associations]
            symbol:RTS "RECQL4-helicase-like protein" species:8355
            "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
            "chromatin binding" evidence=IDA] [GO:0006270 "DNA replication
            initiation" evidence=IMP] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0000785
            GO:GO:0003682 GO:GO:0003676 GO:GO:0006270 Gene3D:4.10.60.10
            SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 HOVERGEN:HBG065925 KO:K10730 InterPro:IPR021110
            Pfam:PF11719 EMBL:DQ059311 RefSeq:NP_001089101.1 UniGene:Xl.86701
            ProteinModelPortal:Q4JNX8 GeneID:733317 KEGG:xla:733317 CTD:733317
            Uniprot:Q4JNX8
        Length = 1500

 Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 29/86 (33%), Positives = 50/86 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY--RLPDVFKLSS 172
             ++AFG+G+DK +VR +IH+ + K+ E++ QE GRAGRDG+ A C L+      D+ +L  
Sbjct:  1047 TVAFGMGLDKSDVRGIIHYNMPKNFESYVQEIGRAGRDGKDAQCHLFLDPEGQDMDELRR 1106

Query:   173 MVFDQQTGLANLYNIVSYCLDQTRCR 198
              ++        +  +V     + +CR
Sbjct:  1107 HIYTDSVDYIAVKKLVRKVFPKCKCR 1132


>UNIPROTKB|Q33DM4 [details] [associations]
            symbol:recql4 "RecQ4 protein" species:8355 "Xenopus laevis"
            [GO:0000785 "chromatin" evidence=IDA] [GO:0003682 "chromatin
            binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0006260 "DNA replication"
            evidence=IMP] [GO:0035563 "positive regulation of chromatin
            binding" evidence=IMP] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270 Pfam:PF00271
            PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0006260
            GO:GO:0008270 GO:GO:0000785 GO:GO:0003682 GO:GO:0003676
            Gene3D:4.10.60.10 SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487
            PROSITE:PS51192 GO:GO:0008026 GO:GO:0035563 CTD:9401
            HOVERGEN:HBG065925 KO:K10730 InterPro:IPR021110 Pfam:PF11719
            EMBL:AB213025 RefSeq:NP_001089182.1 UniGene:Xl.51337
            ProteinModelPortal:Q33DM4 GeneID:734225 KEGG:xla:734225
            Xenbase:XB-GENE-997817 Uniprot:Q33DM4
        Length = 1503

 Score = 141 (54.7 bits), Expect = 1.4e-06, P = 1.4e-06
 Identities = 29/86 (33%), Positives = 50/86 (58%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYY--RLPDVFKLSS 172
             ++AFG+G+DK +VR +IH+ + K+ E++ QE GRAGRDG+ A C L+      D+ +L  
Sbjct:  1050 TVAFGMGLDKSDVRGIIHYNMPKNFESYVQEIGRAGRDGKDAQCHLFLDPEGQDMDELRR 1109

Query:   173 MVFDQQTGLANLYNIVSYCLDQTRCR 198
              ++        +  +V     + +CR
Sbjct:  1110 HIYTDSVDYIAVKKLVRKVFPKCKCR 1135


>MGI|MGI:1931028 [details] [associations]
            symbol:Recql4 "RecQ protein-like 4" species:10090 "Mus
            musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0000405 "bubble DNA binding" evidence=ISO] [GO:0000733 "DNA
            strand renaturation" evidence=ISO] [GO:0001501 "skeletal system
            development" evidence=IMP] [GO:0003676 "nucleic acid binding"
            evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006260
            "DNA replication" evidence=ISO] [GO:0006310 "DNA recombination"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0008284 "positive regulation of cell proliferation"
            evidence=IMP] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0032508 "DNA duplex unwinding" evidence=ISO] [GO:0043140
            "ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
            [GO:0043473 "pigmentation" evidence=IMP] [GO:0045875 "negative
            regulation of sister chromatid cohesion" evidence=IMP] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048705 "skeletal system
            morphogenesis" evidence=IMP] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR004589 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
            Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50158 PROSITE:PS51194
            SMART:SM00343 SMART:SM00490 MGI:MGI:1931028 GO:GO:0005524
            GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008284
            GO:GO:0006260 GO:GO:0008270 GO:GO:0003676 GO:GO:0006310
            Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0048705 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043473 eggNOG:COG0514
            GeneTree:ENSGT00550000074520 TIGRFAMs:TIGR00614 GO:GO:0008026
            GO:GO:0045875 CTD:9401 HOGENOM:HOG000264957 HOVERGEN:HBG065925
            KO:K10730 InterPro:IPR021110 Pfam:PF11719 EMBL:AB039882
            EMBL:AB175741 EMBL:AB042529 IPI:IPI00119366 IPI:IPI00462416
            RefSeq:NP_478121.2 UniGene:Mm.18373 ProteinModelPortal:Q75NR7
            SMR:Q75NR7 IntAct:Q75NR7 STRING:Q75NR7 PhosphoSite:Q75NR7
            PRIDE:Q75NR7 DNASU:79456 Ensembl:ENSMUST00000036852 GeneID:79456
            KEGG:mmu:79456 UCSC:uc007wlv.1 OrthoDB:EOG4CJVGG NextBio:349927
            Bgee:Q75NR7 CleanEx:MM_RECQL4 Genevestigator:Q75NR7
            GermOnline:ENSMUSG00000033762 Uniprot:Q75NR7
        Length = 1216

 Score = 138 (53.6 bits), Expect = 2.5e-06, P = 2.5e-06
 Identities = 25/47 (53%), Positives = 36/47 (76%)

Query:   115 SIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILY 161
             ++AFG+G+D+P+VR V+H  L  S E++ Q  GRAGRDG+ AHC L+
Sbjct:   793 TVAFGMGLDRPDVRAVLHLGLPPSFESYVQAIGRAGRDGKPAHCHLF 839


>POMBASE|SPBCPT2R1.08c [details] [associations]
            symbol:tlh2 "RecQ type DNA helicase Tlh1" species:4896
            "Schizosaccharomyces pombe" [GO:0000722 "telomere maintenance via
            recombination" evidence=IEP] [GO:0000781 "chromosome, telomeric
            region" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=TAS] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
            PROSITE:PS51194 SMART:SM00343 SMART:SM00490 PomBase:SPBCPT2R1.08c
            GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 EMBL:CU329671
            GO:GO:0008270 GenomeReviews:CU329671_GR GO:GO:0003676
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043140
            GO:GO:0000781 GO:GO:0000722 HOGENOM:HOG000213224 OrthoDB:EOG4XH37R
            EMBL:BX784043 RefSeq:XP_001713158.1 ProteinModelPortal:Q1RKN3
            EnsemblFungi:SPBCPT2R1.08c.1 GeneID:5802845 KEGG:spo:SPBCPT2R1.08c
            NextBio:20892152 Uniprot:Q1RKN3
        Length = 1919

 Score = 137 (53.3 bits), Expect = 5.6e-06, P = 5.6e-06
 Identities = 49/145 (33%), Positives = 73/145 (50%)

Query:    68 DLMSRRFRNQSGIIYTTSIK-ECEDLREELRNRGLRVSAY-HAKLESNVSIA---FGLGI 122
             + + RR  +QS +   T +     D+ +E   R +   A+ +A  ++ + IA   FGLGI
Sbjct:  1429 EYIHRRL-HQSDLFAHTHVTIYTGDVSDE--ERQMNFDAFRNANGKTRIMIATKAFGLGI 1485

Query:   123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA 182
             +   VR V+H+ L  S  ++ QE+GRAGRDG+ A   L+Y   D    SS V D    + 
Sbjct:  1486 NYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS-TWSSYVEDS---MK 1541

Query:   183 NLYNIVSYCLDQTRCRRAIIASYFD 207
             N  N      D T C R+ +AS  D
Sbjct:  1542 NFLN------DNTMCVRSFLASEMD 1560


>POMBASE|SPAC212.11 [details] [associations]
            symbol:tlh1 "RecQ type DNA helicase" species:4896
            "Schizosaccharomyces pombe" [GO:0000722 "telomere maintenance via
            recombination" evidence=IEP] [GO:0000781 "chromosome, telomeric
            region" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=NAS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
            activity" evidence=TAS] InterPro:IPR001650 InterPro:IPR001878
            InterPro:IPR004695 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
            Pfam:PF03595 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
            SMART:SM00490 PomBase:SPBCPT2R1.08c GO:GO:0016021 GO:GO:0005524
            GO:GO:0005634 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0055085 GO:GO:0003676 InterPro:IPR014001
            SMART:SM00487 PROSITE:PS51192 GO:GO:0043140 GO:GO:0000781
            GO:GO:0000722 eggNOG:COG0514 EMBL:BK005597
            ProteinModelPortal:Q5EAK4 TCDB:2.A.16.2.2 HOGENOM:HOG000213224
            OrthoDB:EOG4XH37R NextBio:20892297 Uniprot:Q5EAK4
        Length = 2100

 Score = 137 (53.3 bits), Expect = 6.2e-06, P = 6.2e-06
 Identities = 49/145 (33%), Positives = 73/145 (50%)

Query:    68 DLMSRRFRNQSGIIYTTSIK-ECEDLREELRNRGLRVSAY-HAKLESNVSIA---FGLGI 122
             + + RR  +QS +   T +     D+ +E   R +   A+ +A  ++ + IA   FGLGI
Sbjct:  1610 EYIHRRL-HQSDLFAHTHVTIYTGDVSDE--ERQMNFDAFRNANGKTRIMIATKAFGLGI 1666

Query:   123 DKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFDQQTGLA 182
             +   VR V+H+ L  S  ++ QE+GRAGRDG+ A   L+Y   D    SS V D    + 
Sbjct:  1667 NYMGVRLVVHYGLPASSMDYVQETGRAGRDGKYAIAALFYEKYDS-TWSSYVEDS---MK 1722

Query:   183 NLYNIVSYCLDQTRCRRAIIASYFD 207
             N  N      D T C R+ +AS  D
Sbjct:  1723 NFLN------DNTMCVRSFLASEMD 1741


>ASPGD|ASPL0000073665 [details] [associations]
            symbol:AN5092 species:162425 "Emericella nidulans"
            [GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
            acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001650
            InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
            SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:BN001303
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 eggNOG:COG0514
            GO:GO:0008026 EMBL:AACD01000086 InterPro:IPR022698 Pfam:PF12013
            RefSeq:XP_662696.1 ProteinModelPortal:Q5B2Y8
            EnsemblFungi:CADANIAT00005288 GeneID:2872891 KEGG:ani:AN5092.2
            HOGENOM:HOG000217656 OrthoDB:EOG45XC49 Uniprot:Q5B2Y8
        Length = 1571

 Score = 133 (51.9 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 37/125 (29%), Positives = 65/125 (52%)

Query:   117 AFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRDGQIAHCILYYRLPDVFKLSSMVFD 176
             A G+GID P++R VIH    +++ ++ QESGRAGRDG  +  ++ +  P  +       D
Sbjct:  1188 ALGMGIDIPDIRCVIHLGRPRTLLDYSQESGRAGRDGLASKAVIVH--PQGWDDLDPWVD 1245

Query:   177 QQTGLANLYNIVSYC--LDQTRCRRAIIASYFD---EAWSDTECRGM------CDHCRGG 225
             + +  A   +I +Y   ++   CRR ++  Y D   + ++  +C+        CD CR  
Sbjct:  1246 RVSD-AEFEHIQAYMEVVEGVGCRRYVLDQYLDGTVDGYTRQQCQDQDPDKLPCDACRPD 1304

Query:   226 RRDAK 230
             R+D +
Sbjct:  1305 RQDER 1309


>UNIPROTKB|F1LX16 [details] [associations]
            symbol:F1LX16 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
            [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
            evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
            InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
            PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
            GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
            GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
            Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
        Length = 659

 Score = 114 (45.2 bits), Expect = 0.00073, P = 0.00073
 Identities = 25/89 (28%), Positives = 48/89 (53%)

Query:    93 REELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
             + E+  +G R   +   + +NV+     G+D P V  V+  C  K +E++   SGR GR 
Sbjct:   355 QREITLKGFRNDNFGVLVATNVAAR---GLDIPEVDLVVQSCPPKDVESYIHRSGRTGRA 411

Query:   153 GQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
             G+   CI +Y+  + ++L+ +  +Q+ G+
Sbjct:   412 GRTGVCICFYQHKEEYQLAQV--EQKAGI 438


>RGD|1307306 [details] [associations]
            symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
            species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
            evidence=IEA] [GO:0003725 "double-stranded RNA binding"
            evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
            [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
            [GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
            to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
            InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
            Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
            RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
            InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
            eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
            GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
            HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
            RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
            STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
            Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
            UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
            Uniprot:Q3B8Q1
        Length = 782

 Score = 114 (45.2 bits), Expect = 0.00091, P = 0.00091
 Identities = 25/89 (28%), Positives = 48/89 (53%)

Query:    93 REELRNRGLRVSAYHAKLESNVSIAFGLGIDKPNVRFVIHHCLSKSMENFYQESGRAGRD 152
             + E+  +G R   +   + +NV+     G+D P V  V+  C  K +E++   SGR GR 
Sbjct:   471 QREITLKGFRNGNFGVLVATNVAAR---GLDIPEVDLVVQSCPPKDVESYIHRSGRTGRA 527

Query:   153 GQIAHCILYYRLPDVFKLSSMVFDQQTGL 181
             G+   CI +Y+  + ++L+ +  +Q+ G+
Sbjct:   528 GRTGVCICFYQHKEEYQLAQV--EQKAGI 554


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.327   0.139   0.432    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      234       234   0.00087  113 3  11 22  0.46    32
                                                     32  0.43    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  100
  No. of states in DFA:  606 (64 KB)
  Total size of DFA:  189 KB (2106 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  21.02u 0.17s 21.19t   Elapsed:  00:00:01
  Total cpu time:  21.03u 0.17s 21.20t   Elapsed:  00:00:01
  Start:  Thu Aug 15 13:17:43 2013   End:  Thu Aug 15 13:17:44 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with K02F3.12 K02F3.12 K02F3.12	gene from Caenorhabditis elegans	1.1e-47
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Sus scrofa	1.2e-45
BLAST match view associations BLAST with RECQL RECQL RECQL ATP-dependent DNA helicase Q1	protein from Homo sapiens	2.2e-45
BLAST match view associations BLAST with Recql Recql Recql RecQ protein-like (DNA helicase Q1-like)	gene from Rattus norvegicus	2.9e-45
BLAST match view associations BLAST with recql recql recql RecQ protein-like (DNA helicase Q1-like)	gene_product from Danio rerio	1.1e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Bos taurus	1.1e-44
BLAST match view associations BLAST with Recql Recql Recql RecQ protein-like	protein from Mus musculus	1.2e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Canis lupus familiaris	3.3e-44
BLAST match view associations BLAST with RECQL RECQL RECQL Uncharacterized protein	protein from Gallus gallus	5.9e-43
BLAST match view associations BLAST with SGS1 SGS1 SGS1	gene_product from Candida albicans	3.2e-31
BLAST match view associations BLAST with SGS1 SGS1 SGS1 Putative uncharacterized protein SGS1	protein from Candida albicans SC5314	3.2e-31
BLAST match view associations BLAST with RECQL2 RECQL2 RECQL2 RECQ helicase L2	protein from Arabidopsis thaliana	3.2e-31
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome helicase ortholog	protein from Drosophila melanogaster	1.2e-30
BLAST match view associations BLAST with DDB_G0272384 DDB_G0272384 DDB_G0272384 Bloom syndrome-like protein	gene from Dictyostelium discoideum	2.3e-30
BLAST match view associations BLAST with SGS1 SGS1 SGS1 Nucleolar DNA helicase of the RecQ family	gene from Saccharomyces cerevisiae	7.9e-30
BLAST match view associations BLAST with blm blm blm Bloom syndrome protein homolog	protein from Xenopus laevis	1.5e-28
BLAST match view associations BLAST with blm blm blm Bloom syndrome protein	gene from Dictyostelium discoideum	2.3e-27
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein homolog	protein from Gallus gallus	5.8e-27
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein homolog	protein from Gallus gallus	1.2e-26
BLAST match view associations BLAST with RECQI1 RECQI1 RECQI1 RECQ helicase l1	protein from Arabidopsis thaliana	7.7e-26
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome, RecQ helicase-like	protein from Mus musculus	4.2e-24
BLAST match view associations BLAST with blm blm blm Bloom syndrome	gene_product from Danio rerio	5.1e-24
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Sus scrofa	1.2e-23
BLAST match view associations BLAST with BA_2818 BA_2818 BA_2818 ATP-dependent DNA helicase RecQ	protein from Bacillus anthracis str. Ames	1.4e-23
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein	protein from Homo sapiens	2.6e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Canis lupus familiaris	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Bloom syndrome protein	protein from Homo sapiens	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Canis lupus familiaris	3.0e-23
BLAST match view associations BLAST with BLM BLM BLM Uncharacterized protein	protein from Bos taurus	6.3e-23
BLAST match view associations BLAST with recQ recQ recQ	protein from Escherichia coli K-12	7.0e-23
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Canis lupus familiaris	8.6e-23
BLAST match view associations BLAST with VC_0196 VC_0196 VC_0196 ATP-dependent DNA helicase RecQ	protein from Vibrio cholerae O1 biovar El Tor str. N16961	2.6e-22
BLAST match view associations BLAST with VC_0196 VC_0196 VC_0196 ATP-dependent DNA helicase RecQ	protein from Vibrio cholerae O1 biovar El Tor	2.6e-22
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	2.7e-22
BLAST match view associations BLAST with him-6 him-6 him-6	gene from Caenorhabditis elegans	4.3e-22
BLAST match view associations BLAST with RecQl3 RecQl3 RecQl3 AT4G35740	protein from Arabidopsis thaliana	2.0e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 RecQ protein-like 5	protein from Homo sapiens	3.0e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	3.3e-21
BLAST match view associations BLAST with RECQ4A RECQ4A RECQ4A	protein from Arabidopsis thaliana	3.3e-21
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Bos taurus	1.8e-20
BLAST match view associations BLAST with CBU_0472 CBU_0472 CBU_0472 ATP-dependent DNA helicase RecQ	protein from Coxiella burnetii RSA 493	2.2e-20
BLAST match view associations BLAST with SO_4241 SO_4241 SO_4241 ATP-dependent DNA helicase RecQ	protein from Shewanella oneidensis MR-1	3.5e-20
BLAST match view associations BLAST with RECQSIM RECQSIM RECQSIM RECQ helicase SIM	protein from Arabidopsis thaliana	5.8e-20
BLAST match view associations BLAST with rcq-5 rcq-5 rcq-5	gene from Caenorhabditis elegans	2.4e-19
BLAST match view associations BLAST with SO_2380 SO_2380 SO_2380 ATP-dependent DNA helicase RecQ family	protein from Shewanella oneidensis MR-1	5.7e-18
BLAST match view associations BLAST with SO_2380 SO_2380 SO_2380 RecQ domain protein	protein from Shewanella oneidensis MR-1	5.7e-18
BLAST match view associations BLAST with recQ recQ recQ Probable ATP-dependent DNA helicase RecQ	protein from Bacillus subtilis subsp. subtilis str. 168	1.5e-17
BLAST match view associations BLAST with Blm Blm Blm Bloom syndrome, RecQ helicase-like	gene from Rattus norvegicus	1.7e-17
BLAST match view associations BLAST with PF14_0278 PF14_0278 PF14_0278 ATP-dependent DNA helicase, putative	gene from Plasmodium falciparum	6.6e-17
BLAST match view associations BLAST with PF14_0278 PF14_0278 PF14_0278 ATP-dependent DNA helicase, putative	protein from Plasmodium falciparum 3D7	6.6e-17
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Sus scrofa	1.0e-16
BLAST match view associations BLAST with GSU_0898 GSU_0898 GSU_0898 ATP-dependent DNA helicase RecQ	protein from Geobacter sulfurreducens PCA	1.9e-16
BLAST match view associations BLAST with RecQ5 RecQ5 RecQ5 homolog of RecQ	protein from Drosophila melanogaster	4.1e-16
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	1.3e-15
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 Uncharacterized protein	protein from Gallus gallus	1.5e-15
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	2.1e-15
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Canis lupus familiaris	2.3e-15
BLAST match view associations BLAST with Recql5 Recql5 Recql5 RecQ protein-like 5	gene from Rattus norvegicus	2.9e-15
BLAST match view associations BLAST with SPO_0107 SPO_0107 SPO_0107 ATP-dependent DNA helicase RecQ	protein from Ruegeria pomeroyi DSS-3	5.3e-15
BLAST match view associations BLAST with wrn-1 wrn-1 wrn-1	gene from Caenorhabditis elegans	3.8e-14
BLAST match view associations BLAST with CPS_4237 CPS_4237 CPS_4237 RecQ domain protein	protein from Colwellia psychrerythraea 34H	8.5e-14
BLAST match view associations BLAST with CPS_4237 CPS_4237 CPS_4237 RecQ domain protein	protein from Colwellia psychrerythraea 34H	8.5e-14
BLAST match view associations BLAST with WRN WRN WRN Werner syndrome ATP-dependent helicase	protein from Homo sapiens	8.6e-14
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome	gene_product from Danio rerio	1.8e-13
BLAST match view associations BLAST with RECQL5 RECQL5 RECQL5 ATP-dependent DNA helicase Q5	protein from Homo sapiens	3.9e-12
BLAST match view associations BLAST with Wrn Wrn Wrn Werner syndrome homolog (human)	protein from Mus musculus	5.2e-12
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Gallus gallus	5.8e-12
BLAST match view associations BLAST with F1RX70 F1RX70 F1RX70 Uncharacterized protein	protein from Sus scrofa	1.6e-11
BLAST match view associations BLAST with I3LC91 I3LC91 I3LC91 Uncharacterized protein	protein from Sus scrofa	1.9e-11
BLAST match view associations BLAST with Wrn Wrn Wrn Werner syndrome, RecQ helicase-like	gene from Rattus norvegicus	1.1e-10
BLAST match view associations BLAST with WRN WRN WRN Uncharacterized protein	protein from Bos taurus	1.3e-10
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome ATP-dependent helicase homolog	protein from Xenopus laevis	2.3e-10
BLAST match view associations BLAST with wrn wrn wrn Werner syndrome protein	gene from Dictyostelium discoideum	5.9e-10
BLAST match view associations BLAST with CPS_2945 CPS_2945 CPS_2945 Putative DEAD/DEAH box helicase	protein from Colwellia psychrerythraea 34H	1.1e-07
BLAST match view associations BLAST with CPS_2945 CPS_2945 CPS_2945 putative DEAD/DEAH box helicase	protein from Colwellia psychrerythraea 34H	1.1e-07
BLAST match view associations BLAST with AT1G27880 AT1G27880 AT1G27880	protein from Arabidopsis thaliana	1.9e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 Uncharacterized protein	protein from Sus scrofa	2.8e-07
BLAST match view associations BLAST with Recql4 Recql4 Recql4 RecQ protein-like 4	gene from Rattus norvegicus	3.6e-07
BLAST match view associations BLAST with RecQ4 RecQ4 RecQ4	protein from Drosophila melanogaster	3.9e-07
BLAST match view associations BLAST with H9KZS5 H9KZS5 H9KZS5 Uncharacterized protein	protein from Gallus gallus	6.7e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 ATP-dependent DNA helicase Q4	protein from Homo sapiens	8.3e-07
BLAST match view associations BLAST with RECQL4 RECQL4 RECQL4 RECQL4 protein	protein from Bos taurus	9.6e-07
BLAST match view associations BLAST with BA_1505 BA_1505 BA_1505 ATP-dependent DNA helicase RecQ	protein from Bacillus anthracis str. Ames	1.2e-06
BLAST match view associations BLAST with RTS RTS RTS RECQL4-helicase-like protein	protein from Xenopus laevis	1.4e-06
BLAST match view associations BLAST with recql4 recql4 recql4 RecQ4 protein	protein from Xenopus laevis	1.4e-06
BLAST match view associations BLAST with Recql4 Recql4 Recql4 RecQ protein-like 4	protein from Mus musculus	2.5e-06
BLAST match view associations BLAST with Ddx21 Ddx21 Ddx21 DEAD (Asp-Glu-Ala-Asp) box helicase 21	gene from Rattus norvegicus	0.00091