Query psy4496
Match_columns 228
No_of_seqs 222 out of 632
Neff 3.9
Searched_HMMs 29240
Date Fri Aug 16 18:35:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4496.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4496hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1mp1_A Ser/Arg-related nuclear 100.0 7.7E-33 2.6E-37 220.2 6.3 85 6-90 3-101 (111)
2 1x4q_A U4/U6 small nuclear rib 99.9 5.9E-23 2E-27 158.1 4.5 71 15-85 5-80 (92)
3 3v53_A RNA-binding protein 25; 99.7 8.7E-18 3E-22 135.1 3.3 71 13-83 28-107 (119)
4 2ftc_E L12MT, MRP-L12, 39S rib 99.3 1.3E-12 4.5E-17 107.2 4.7 57 161-217 1-74 (137)
5 2zjq_5 50S ribosomal protein L 99.3 3.1E-12 1.1E-16 103.4 5.0 57 162-218 4-63 (122)
6 2j01_L 50S ribosomal protein L 99.2 5E-12 1.7E-16 102.5 5.0 57 162-218 4-66 (125)
7 3sgf_J 50S ribosomal protein L 99.2 8.1E-13 2.8E-17 106.6 -0.0 56 162-217 4-60 (121)
8 1dd3_A 50S ribosomal protein L 99.1 5.5E-12 1.9E-16 102.6 -0.5 55 163-217 3-64 (128)
9 1dd4_C 50S ribosomal protein L 99.0 2.9E-10 1E-14 75.9 4.8 34 162-195 2-35 (40)
10 1zav_U 50S ribosomal protein L 98.3 3.8E-07 1.3E-11 57.4 3.6 28 163-190 3-30 (30)
11 2b5b_A Defensin; antibiotic; N 53.6 5.3 0.00018 25.5 1.3 16 115-130 20-35 (36)
12 2p63_A Cell division control p 39.2 24 0.00084 24.7 3.0 26 164-189 28-53 (56)
13 2liu_A CURA; holo state, trans 27.4 51 0.0017 22.7 3.2 36 8-43 2-37 (99)
14 2jq4_A AGR_C_4658P, hypothetic 24.9 68 0.0023 23.6 3.6 22 173-194 55-76 (105)
15 2v75_A Nuclear polyadenylated 23.4 2.4E+02 0.0081 21.9 6.5 68 27-104 9-79 (104)
No 1
>1mp1_A Ser/Arg-related nuclear matrix protein; four helix bundle, RNA binding protein; NMR {Homo sapiens} SCOP: a.188.1.1
Probab=99.97 E-value=7.7e-33 Score=220.18 Aligned_cols=85 Identities=35% Similarity=0.582 Sum_probs=77.4
Q ss_pred ccccCccccccccCccccCcchhhhHHHHHHHHhcCCCchHHHHHHHHHhhccCcc------chhcccc-cCchhHHHHH
Q psy4496 6 FALTSKPQVVQKVDMTKVKLDILKPWITQKITQLLGMEDDVVVAFVYNQLEAEKVS------TIFEFDL-AKKVPVCKEI 78 (228)
Q Consensus 6 ~~~kfP~~f~~kVDm~KVnl~vikpWI~~rItelLG~EDDVvieyi~~lLe~~~~p------~I~gFL~-~~~a~F~~eL 78 (228)
+++|||++|++||||+|||+++|||||++||+++||+|||||||||||+|+++.++ ||+|||+ +++..||++|
T Consensus 3 ~~~kfp~~f~~kVD~~kV~l~~ikpWI~kki~e~LG~EDdvlid~i~~~L~~~~~dpk~lqi~L~gFL~~e~a~~Fv~eL 82 (111)
T 1mp1_A 3 MQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEILGFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGEL 82 (111)
T ss_dssp CCCCCCSGGGGCCCTTTSCSGGGHHHHHHHHHHHHSSCCSHHHHHHHHHTTSSSCCHHHHHHHHTTTSCSHHHHHHHHHH
T ss_pred ccccCCHHHhccccHHHhhHHHHHHHHHHHHHHHcCCccHHHHHHHHHHhhccCCCHHHHHHHHHHHhCcccHHHHHHHH
Confidence 57999999999999999999999999999999999999999999999999975432 6799998 4555699999
Q ss_pred hhhcc-------ChhHHHH
Q psy4496 79 GKGDL-------GLMQVVT 90 (228)
Q Consensus 79 WkLll-------gi~q~vl 90 (228)
|+||+ |||++++
T Consensus 83 W~LLi~aq~~~~GIP~~~l 101 (111)
T 1mp1_A 83 WPLLLSAQENIAGIPSAFL 101 (111)
T ss_dssp HHHHHHHTTSSSSCCHHHH
T ss_pred HHHHHHhhcCCcCcCHHHH
Confidence 99998 9999877
No 2
>1x4q_A U4/U6 small nuclear ribonucleoprotein PRP3; PWI domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=5.9e-23 Score=158.06 Aligned_cols=71 Identities=20% Similarity=0.276 Sum_probs=63.7
Q ss_pred ccccCccccCcchhhhHHHHHHHHhcCCCchHHHHHHHHHhhccCcc-----chhcccccCchhHHHHHhhhccCh
Q psy4496 15 VQKVDMTKVKLDILKPWITQKITQLLGMEDDVVVAFVYNQLEAEKVS-----TIFEFDLAKKVPVCKEIGKGDLGL 85 (228)
Q Consensus 15 ~~kVDm~KVnl~vikpWI~~rItelLG~EDDVvieyi~~lLe~~~~p-----~I~gFL~~~~a~F~~eLWkLllgi 85 (228)
+..|||+|||+++|||||+++|+|+||+|||+|||||+++|+....| +|++||++++..||.+||++++..
T Consensus 5 ~~~~d~~kv~l~~lkpWI~kkv~e~LG~eD~~lVd~i~~~l~~~~dpk~l~~~L~~fLd~~a~~Fv~eLW~lL~~a 80 (92)
T 1x4q_A 5 SSGMALSKRELDELKPWIEKTVKRVLGFSEPTVVTAALNCVGKGMDKKKAADHLKPFLDDSTLRFVDKLFEAVEEG 80 (92)
T ss_dssp SSCCCCCHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTCCHHHHHHHHTTTTGGGTHHHHHHHHHHHHHH
T ss_pred CCCccchHHhHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 45799999999999999999999999999999999999999965444 688999988666999999999743
No 3
>3v53_A RNA-binding protein 25; PWI, RNA-binding domain; 2.90A {Homo sapiens}
Probab=99.68 E-value=8.7e-18 Score=135.13 Aligned_cols=71 Identities=18% Similarity=0.251 Sum_probs=60.9
Q ss_pred ccccccCccccCcc----hhhhHHHHHHHHhcCCCchHHHHHHHHHhhccCcc-----chhcccccCchhHHHHHhhhcc
Q psy4496 13 QVVQKVDMTKVKLD----ILKPWITQKITQLLGMEDDVVVAFVYNQLEAEKVS-----TIFEFDLAKKVPVCKEIGKGDL 83 (228)
Q Consensus 13 ~f~~kVDm~KVnl~----vikpWI~~rItelLG~EDDVvieyi~~lLe~~~~p-----~I~gFL~~~~a~F~~eLWkLll 83 (228)
.|+.+||-+.||-. +|||||+++|+|+||+|||+|||||+++|++...| ++++||++++..||.+||++|+
T Consensus 28 Lf~~~i~W~~vd~~~i~~~lkPWI~kKI~E~LG~eEd~LVdfI~~~L~~~~~pk~l~~~L~~~LDeeA~~FV~kLWrlLI 107 (119)
T 3v53_A 28 LFAYPLDWSIVDSILMERRIRPWINKKIIEYIGEEEATLVDFVCSKVMAHSSPQSILDDVAMVLDEEAEVFIVKMWRLLI 107 (119)
T ss_dssp HHHSCCCTTTSCHHHHHHTHHHHHHHHHHHHTC---CHHHHHHHHHHHTTCCHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred HhcccCChhhhhHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57888888888766 77999999999999999999999999999987766 6899998877789999999976
No 4
>2ftc_E L12MT, MRP-L12, 39S ribosomal protein L12, mitochondrial; mitochondrial ribosome, large ribosomal subunit, ribosomal R ribosome; 12.10A {Bos taurus}
Probab=99.30 E-value=1.3e-12 Score=107.22 Aligned_cols=57 Identities=46% Similarity=0.617 Sum_probs=44.8
Q ss_pred hHHHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCcccccc----c---ccc--------c--ccccccccccce
Q psy4496 161 PKITKLANDISSLTLLECADLSSLLKKQLNLPDAPMMAMG----A---FAQ--------G--RYLRTIFDATSC 217 (228)
Q Consensus 161 pKv~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa~~aaa----a---aAa--------a--AaEkTeFdv~~~ 217 (228)
||+++|+|+|++||++|++||++.|+++|||+++++++++ + +++ + ++|||+|||.--
T Consensus 1 ~kv~~ive~i~~LtllE~~eLv~~leekfgv~aaa~~~~~~~~~~~~~~a~a~~~~~~~a~~~eEKteFdV~L~ 74 (137)
T 2ftc_E 1 PKIQQLVQDIASLTLLEISDLNELLKKTLKIQDVGLMPMGGMVPGAAPAPTAPEAAEEDVPKQKERTHFTVRLT 74 (137)
T ss_pred CcHHHHHHHHHcCCHHHHHHHHHHHHHHhCCCcccccccccccccCCCCccccccccccccccccCCeeEEEee
Confidence 6899999999999999999999999999999987643322 1 111 1 247999999754
No 5
>2zjq_5 50S ribosomal protein L7/L12; ribosome, ribosomal subunit, thiopeptide antibiotics, complex, translational regulation, molecular switch; 3.30A {Deinococcus radiodurans} SCOP: d.45.1.1
Probab=99.27 E-value=3.1e-12 Score=103.35 Aligned_cols=57 Identities=28% Similarity=0.296 Sum_probs=44.4
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCcccccc-ccc--cccccccccccccee
Q psy4496 162 KITKLANDISSLTLLECADLSSLLKKQLNLPDAPMMAMG-AFA--QGRYLRTIFDATSCE 218 (228)
Q Consensus 162 Kv~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa~~aaa-aaA--aaAaEkTeFdv~~~~ 218 (228)
+.++|+|+|++||++|++||++.|+++|||+++++++++ +++ ++++|||+|||.--+
T Consensus 4 ~~~~i~e~i~~ltllE~~eLv~~lee~fgv~aaap~a~a~~~a~a~a~eEKteFdV~L~~ 63 (122)
T 2zjq_5 4 DKQALIDQLGQLTIMELADLIDGLKETWGVTAAVAVSGGGAGAASPAAEEKTEFDVVLID 63 (122)
T ss_pred cHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCCcccccccCCCcccccccccceeEEEEec
Confidence 358999999999999999999999999999987533222 212 233589999997543
No 6
>2j01_L 50S ribosomal protein L7; ribosome, tRNA, paromomycin, mRNA, translation; 2.8A {Thermus thermophilus} PDB: 2j03_L 3i8i_I
Probab=99.24 E-value=5e-12 Score=102.48 Aligned_cols=57 Identities=26% Similarity=0.282 Sum_probs=43.8
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCcccc-c-cc-c-c--cccccccccccccee
Q psy4496 162 KITKLANDISSLTLLECADLSSLLKKQLNLPDAPMMA-M-GA-F-A--QGRYLRTIFDATSCE 218 (228)
Q Consensus 162 Kv~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa~~a-a-aa-a-A--aaAaEkTeFdv~~~~ 218 (228)
+.++|+|+|++||++|++||++.|+++|||+++++++ + ++ + + ++++|||+|||.--+
T Consensus 4 ~~~~i~e~i~~ltllE~~eLv~~lee~fgv~aaapva~~~~~~~a~~a~a~eEKteFdV~L~~ 66 (125)
T 2j01_L 4 DIERIKEELSQATVLELKQLIDALKEAWGVTAAAPVAVAAAPAAGAAAAPAEEKTEFDVILKE 66 (125)
T ss_pred cHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCccccccccccCccccccccccccceeEEEEee
Confidence 3589999999999999999999999999999875322 2 11 1 1 223589999997543
No 7
>3sgf_J 50S ribosomal protein L7/L12; typeii release factor binding with ribosome, ribosome-antibi complex; 3.20A {Escherichia coli} PDB: 2xtg_L 2xux_L 3uos_J 1rqu_A 1rqv_A 2gya_3 2gyc_3 1rqt_A
Probab=99.23 E-value=8.1e-13 Score=106.61 Aligned_cols=56 Identities=14% Similarity=0.277 Sum_probs=26.8
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCcccccccc-cccccccccccccce
Q psy4496 162 KITKLANDISSLTLLECADLSSLLKKQLNLPDAPMMAMGAF-AQGRYLRTIFDATSC 217 (228)
Q Consensus 162 Kv~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa~~aaaaa-AaaAaEkTeFdv~~~ 217 (228)
.+++|+|+|++||++|++||++.|+++|||+++++++++++ +++++|||+|||.--
T Consensus 4 ~~~~ive~i~~ltllE~~eLv~~lee~fgVsaaa~~a~~a~~a~a~eEKteFdV~L~ 60 (121)
T 3sgf_J 4 TKDQIIEAVAAMSVMDVVELISAMEEKFGVSAAAAVAVAAGPVEAAEEKTEFDVILK 60 (121)
T ss_dssp CHHHHHHGGGGCHHHHHHHHHTTTCSCC-----------------------------
T ss_pred cHHHHHHHHHcCCHHHHHHHHHHHHHHcCCCccccccccccccccccccceeEEEEe
Confidence 46899999999999999999999999999998875433222 233469999998744
No 8
>1dd3_A 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix-bundl helix- bundle, alpha-beta structure; 2.00A {Thermotoga maritima} SCOP: a.108.1.1 d.45.1.1 PDB: 1dd4_A* 1giy_I 1yl3_I
Probab=99.11 E-value=5.5e-12 Score=102.62 Aligned_cols=55 Identities=25% Similarity=0.274 Sum_probs=42.5
Q ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCcccc-c-cc--cc---ccccccccccccce
Q psy4496 163 ITKLANDISSLTLLECADLSSLLKKQLNLPDAPMMA-M-GA--FA---QGRYLRTIFDATSC 217 (228)
Q Consensus 163 v~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa~~a-a-aa--aA---aaAaEkTeFdv~~~ 217 (228)
+++|+|+|++||++|++||++.|+++|||+++++++ + ++ ++ ++++|||+|||.--
T Consensus 3 ~~~ive~i~~ltllE~~eLv~~lee~fgv~aaapva~~~~~~~~~a~~~a~eEKteFdV~L~ 64 (128)
T 1dd3_A 3 IDEIIEAIEKLTVSELAELVKKLEDKFGVTAAAPVAVAAAPVAGAAAGAAQEEKTEFDVVLK 64 (128)
T ss_dssp HHHHHHHHTTSCHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEEEEE
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHHhCCCCcchhhccccccccccccccccccceeeEEEe
Confidence 579999999999999999999999999999865322 1 11 11 12248999999754
No 9
>1dd4_C 50S ribosomal protein L7/L12; dimer formation, flexibility, hinge region, four-helix- bundle, five-helix- bundle, alpha-beta structure; HET: TBR; 2.40A {Thermotoga maritima} SCOP: a.108.1.1
Probab=99.01 E-value=2.9e-10 Score=75.86 Aligned_cols=34 Identities=26% Similarity=0.398 Sum_probs=31.5
Q ss_pred HHHHHHHHHhcchHHHHHHHHHHHHHHcCCCCCc
Q psy4496 162 KITKLANDISSLTLLECADLSSLLKKQLNLPDAP 195 (228)
Q Consensus 162 Kv~~IvdeIs~LTLlEvsELv~~LkeKlGVs~aa 195 (228)
++++|+|+|++||++|++||++.||+||||++++
T Consensus 2 ~~~~iie~i~~lTvlE~~eLvk~leekfGVsaaa 35 (40)
T 1dd4_C 2 TIDEIIEAIEKLTVSELAELVKKLEDKFGVTAAA 35 (40)
T ss_dssp HHHHHHHHHTTSCHHHHHHHHHHHHHHTCCCSCC
T ss_pred CHHHHHHHHHhCcHHHHHHHHHHHHHHHCCCccc
Confidence 3689999999999999999999999999999764
No 10
>1zav_U 50S ribosomal protein L7/L12; ribosome structure and function, L10-L12 complex structure, L10E structure, L7/12 ribosomal stalk; 1.90A {Thermotoga maritima} SCOP: a.108.1.1 PDB: 1zaw_U 1zax_U 1dd3_C
Probab=98.33 E-value=3.8e-07 Score=57.42 Aligned_cols=28 Identities=29% Similarity=0.431 Sum_probs=26.9
Q ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHcC
Q psy4496 163 ITKLANDISSLTLLECADLSSLLKKQLN 190 (228)
Q Consensus 163 v~~IvdeIs~LTLlEvsELv~~LkeKlG 190 (228)
+++|+|+|++||++|++||++.|+++||
T Consensus 3 ~~~iie~i~~lTvlEl~eLvk~lEe~fG 30 (30)
T 1zav_U 3 IDEIIEAIEKLTVSELAELVKKLEDKFG 30 (30)
T ss_dssp HHHHHHHHHHSBHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHhC
Confidence 5789999999999999999999999998
No 11
>2b5b_A Defensin; antibiotic; NMR {Caretta caretta}
Probab=53.64 E-value=5.3 Score=25.47 Aligned_cols=16 Identities=38% Similarity=0.735 Sum_probs=14.2
Q ss_pred cccccccccccCCccc
Q psy4496 115 RTYYSKIYLTCKPTKV 130 (228)
Q Consensus 115 ~~~~~~~~~~~~~~~~ 130 (228)
-+|-||-||-|-|.||
T Consensus 20 lpyncgkyiccvpvkv 35 (36)
T 2b5b_A 20 LPYNCGKYICCVPVKV 35 (36)
T ss_dssp CSSSBCCSSCSSSCCB
T ss_pred cCccCCceEEeEEEee
Confidence 4788999999999987
No 12
>2p63_A Cell division control protein 4; ubiquitination, helix bundle, SCF complex, cell cycle; 2.67A {Saccharomyces cerevisiae}
Probab=39.18 E-value=24 Score=24.74 Aligned_cols=26 Identities=27% Similarity=0.373 Sum_probs=21.9
Q ss_pred HHHHHHHhcchHHHHHHHHHHHHHHc
Q psy4496 164 TKLANDISSLTLLECADLSSLLKKQL 189 (228)
Q Consensus 164 ~~IvdeIs~LTLlEvsELv~~LkeKl 189 (228)
.=+..-+++|+.-|++||..++++-|
T Consensus 28 nLiF~Lvs~m~RseLSDl~TlikDNL 53 (56)
T 2p63_A 28 NLLFRLVANMDRSELSDLGTLIKDNL 53 (56)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhccHHHHHHHHHHHHhhh
Confidence 34566789999999999999999865
No 13
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=27.37 E-value=51 Score=22.68 Aligned_cols=36 Identities=17% Similarity=0.121 Sum_probs=27.7
Q ss_pred ccCccccccccCccccCcchhhhHHHHHHHHhcCCC
Q psy4496 8 LTSKPQVVQKVDMTKVKLDILKPWITQKITQLLGME 43 (228)
Q Consensus 8 ~kfP~~f~~kVDm~KVnl~vikpWI~~rItelLG~E 43 (228)
.++|+.=...-.+..++.+.+..||.+.+.++||.+
T Consensus 2 g~~p~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~ 37 (99)
T 2liu_A 2 GLVPRGSHMTPQVNQVNLSEIKQVLKQQLAEALYTE 37 (99)
T ss_dssp CCCCCSSSCCCCCCCCCHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCCccCcccCcCCHHHHHHHHHHHHHHHHCcC
Confidence 456665555556667788999999999999999974
No 14
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=24.90 E-value=68 Score=23.56 Aligned_cols=22 Identities=9% Similarity=0.152 Sum_probs=18.6
Q ss_pred chHHHHHHHHHHHHHHcCCCCC
Q psy4496 173 LTLLECADLSSLLKKQLNLPDA 194 (228)
Q Consensus 173 LTLlEvsELv~~LkeKlGVs~a 194 (228)
+.-+.+.+|+..|+++|||.-.
T Consensus 55 lDSL~~veLv~~lE~~fgI~i~ 76 (105)
T 2jq4_A 55 LSSFASVQLMLGIEEAFDIEFP 76 (105)
T ss_dssp CCHHHHHHHHHHHHHHHSCCCC
T ss_pred CCHHHHHHHHHHHHHHHCCCcC
Confidence 4568899999999999999644
No 15
>2v75_A Nuclear polyadenylated RNA-binding protein NAB2; metal-binding, nucleus, zinc-finger, nuclear PR; 1.8A {Saccharomyces cerevisiae} PDB: 2jps_A 3lcn_A
Probab=23.45 E-value=2.4e+02 Score=21.92 Aligned_cols=68 Identities=13% Similarity=0.142 Sum_probs=45.4
Q ss_pred hhhhHHHHHHHHhcCCCchH--HHHHHHHHhhccCccchhcccccCchhHHHHHhhhccChhHHHH-HHHHHHHHHHHhH
Q psy4496 27 ILKPWITQKITQLLGMEDDV--VVAFVYNQLEAEKVSTIFEFDLAKKVPVCKEIGKGDLGLMQVVT-VVLAILMQEVEGR 103 (228)
Q Consensus 27 vikpWI~~rItelLG~EDDV--vieyi~~lLe~~~~p~I~gFL~~~~a~F~~eLWkLllgi~q~vl-vvla~e~eE~~~~ 103 (228)
-+|--|++|+..+=.|.+|+ |.|||.=|+.... --..-+.||-.|.-++++..+ .|.-.-....++.
T Consensus 9 nLK~ivaekL~~~~NF~EDv~YVAEyIvlLisNg~----------s~~sivqELssLFd~v~~~a~~~vVqt~F~~l~~L 78 (104)
T 2v75_A 9 NLKVIVAEKLAGIPNFNEDIKYVAEYIVLLIVNGG----------TVESVVDELASLFDSVSRDTLANVVQTAFFALEAL 78 (104)
T ss_dssp HHHHHHHHHHTTSTTCCSCHHHHHHHHHHHHHTTC----------CHHHHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCccccHHHHHHHhheeeeCCC----------ChHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHH
Confidence 46777899999987886665 7888887776522 223378899999888887644 3333444445544
Q ss_pred H
Q psy4496 104 R 104 (228)
Q Consensus 104 r 104 (228)
|
T Consensus 79 ~ 79 (104)
T 2v75_A 79 Q 79 (104)
T ss_dssp H
T ss_pred H
Confidence 4
Done!