BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy450
(478 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q13608|PEX6_HUMAN Peroxisome assembly factor 2 OS=Homo sapiens GN=PEX6 PE=1 SV=2
Length = 980
Score = 320 bits (819), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 183/377 (48%), Positives = 251/377 (66%), Gaps = 28/377 (7%)
Query: 99 IQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLV 158
+Q F + V L+E +R +++ L G + +L + L+ +GF DL L+
Sbjct: 583 VQTAFPHELEVPALSEGQRLSILRALTAHL--PLGQEVNLAQ-LARRCAGFVVGDLYALL 639
Query: 159 RLS-------VKNKMLKQGINKRD----------LQKEDFQQIYDDLQSRYSDQLDAPSV 201
S +KN L G+ + D L EDF Q + LQ+ +S + AP +
Sbjct: 640 THSSRAACTRIKNSGLAGGLTEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAVGAPKI 699
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-----GVNRTSGLKRSGLLLYGPPGTGKTLIAKAVAT 256
P+VSW D+GGL ++K EIL T + + GL+RSGLLL+GPPGTGKTL+AKAVAT
Sbjct: 700 PSVSWHDVGGLQEVKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVAT 759
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
EC + FL+VKGPEL+N Y+GQSEEN+R VF +AR+AAPC++FFDELDSLAP RG+ S
Sbjct: 760 ECSLTFLSVKGPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRSGDSG 819
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
GVMDRVVSQLLAE+DG+H++QDVF++GATNR DLLDPA+LRPGR DK ++VG EDR SQ
Sbjct: 820 GVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGANEDRASQ 879
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII---TSAPQV 433
L VL A+ RKFKL VSL +++ P Q++GAD+YS+CS+A T A++R + +
Sbjct: 880 LRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGADLYSLCSDAMTAALKRRVHDLEEGLEP 939
Query: 434 KSAPVIVTMDDFLGACS 450
S+ +++TM+D L A +
Sbjct: 940 GSSALMLTMEDLLQAAA 956
Score = 58.2 bits (139), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 106/237 (44%), Gaps = 10/237 (4%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W + GL L +E+ + + + G +G +LL GPPG GKT + A
Sbjct: 423 PSEESTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L + G E ++ +F +AR P V+ +D L R
Sbjct: 483 ACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLG 542
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + VM V+ LL D +++ + ++ T+R L PA ++ + L E +
Sbjct: 543 EDARVMA-VLRHLLLNEDPLNSCPPLMVVATTSRAQDL-PADVQTAFPHELEVPALSEGQ 600
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA 430
+L +L+A+ L +V+L L + G D+Y++ +++ A RI S
Sbjct: 601 --RLSILRALTAHLPLGQEVNLAQLARRCAGFVVG-DLYALLTHSSRAACTRIKNSG 654
>sp|Q99LC9|PEX6_MOUSE Peroxisome assembly factor 2 OS=Mus musculus GN=Pex6 PE=2 SV=1
Length = 981
Score = 317 bits (811), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 214/283 (75%), Gaps = 8/283 (2%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-----GVNRTS 230
L EDF Q D LQ+ +S + AP +P+VSW D+GGL +K EIL T + +
Sbjct: 675 LLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSL 734
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 735 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 794
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 795 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 854
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 855 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGAD 914
Query: 411 IYSICSNAWTRAIRRII---TSAPQVKSAPVIVTMDDFLGACS 450
+YS+CS+A A++R + +++S+ +++TM+D L A +
Sbjct: 915 LYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAA 957
Score = 48.9 bits (115), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 59/245 (24%), Positives = 101/245 (41%), Gaps = 23/245 (9%)
Query: 199 PSVPN---VSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLI 250
PS+P+ W+ + GL L E+ + + + G +G +LL GPPG+GKT
Sbjct: 421 PSLPSGRSPPWDSLSPPGLEALVNELCAILKPHLQPGGTLLTGTSCVLLQGPPGSGKTTA 480
Query: 251 AKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG 310
A + ++ L V L E ++ F +AR P V+ +D L G
Sbjct: 481 VTAACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLL----G 536
Query: 311 QEDQSSGVMDRVVS---QLLAEMDGVHTSQDVFILGATNRVDLL--DPAILRPGRLDKSL 365
++ G RV + LL + D + + ++ T+RV L D P L+ +
Sbjct: 537 RDRDGLGEDARVAATLRHLLLDEDALSRCPPLMVVATTSRVQDLPTDVQTAFPHELEVPV 596
Query: 366 YVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+L +L+A+ L +V+L L + G D+Y++ ++ A R
Sbjct: 597 L-----SEAQRLSILQALTAHLPLGQEVNLPQLARRCAGFVVG-DLYALLTHTCRAACTR 650
Query: 426 IITSA 430
I S
Sbjct: 651 IRASG 655
>sp|P54777|PEX6_RAT Peroxisome assembly factor 2 OS=Rattus norvegicus GN=Pex6 PE=1 SV=1
Length = 978
Score = 315 bits (806), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 162/283 (57%), Positives = 213/283 (75%), Gaps = 8/283 (2%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-----GVNRTS 230
L EDF Q D LQ+ +S + AP +P+VSW D+GGL +K EIL T + +
Sbjct: 672 LLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSL 731
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 732 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 791
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 792 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 851
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 852 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGAD 911
Query: 411 IYSICSNAWTRAIRRII---TSAPQVKSAPVIVTMDDFLGACS 450
+YS+CS+A A++R + + +S+ +++TM+D L A +
Sbjct: 912 LYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAA 954
Score = 45.4 bits (106), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 16/236 (6%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W+ + GL L E+ + + + G +G +LL GPPG+GKT A
Sbjct: 423 PSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L E ++ F +AR P V+ LD G++
Sbjct: 483 ACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDL----LGRDR 538
Query: 314 QSSGVMDRVVS---QLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY 370
G RVV+ LL + D + + ++ T+RV L P +R L V +
Sbjct: 539 DGLGEDARVVATLRHLLLDEDPLSRCPPLMVVATTSRVQDL-PTDVRTA-FPHELEVPVL 596
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+ +L VL+A+ L +V+L L + G D+Y++ ++A A RI
Sbjct: 597 SES-QRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVG-DLYALLTHASRAACTRI 650
>sp|Q8RY16|PEX6_ARATH Peroxisome biogenesis protein 6 OS=Arabidopsis thaliana GN=PEX6
PE=1 SV=1
Length = 941
Score = 312 bits (799), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 161/285 (56%), Positives = 211/285 (74%), Gaps = 14/285 (4%)
Query: 178 KEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRG--VNR---TSGL 232
KEDF + D + R + L AP VPNV W+D+GGL +K IL T + +++ +SGL
Sbjct: 629 KEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGL 688
Query: 233 -KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
KRSG+LLYGPPGTGKTL+AKAVATEC +NFL+VKGPEL+N YIG+SE+N+R++F KARS
Sbjct: 689 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARS 748
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVH-TSQDVFILGATNRVDL 350
A PCV+FFDELDSLAP RG S GVMDRVVSQ+LAE+DG+ +SQD+FI+GA+NR DL
Sbjct: 749 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDL 808
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
+DPA+LRPGR DK LYVG+ D + VLKA+ RKFKLS+DVSL S+ PS +GAD
Sbjct: 809 IDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGAD 868
Query: 411 IYSICSNAWTRAIRRIITSA-----PQVKSAP--VIVTMDDFLGA 448
+Y++C++AW +A +R ++ + P + P V+V DF+ A
Sbjct: 869 MYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKA 913
Score = 32.3 bits (72), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 38/89 (42%), Gaps = 3/89 (3%)
Query: 234 RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA 293
R +LL+G PG GK + K VA ++ + LL ++ + F AR +
Sbjct: 377 RVAVLLHGIPGCGKRTVVKYVARRLGLHVVEFSCHSLLASSERKTSTALAQTFNMARRYS 436
Query: 294 PCVVFFDELDSLAPRRGQEDQSSGVMDRV 322
P ++ D G +D S G DRV
Sbjct: 437 PTILLLRHFDVFK-NLGSQDGSLG--DRV 462
>sp|Q54CS8|PEX6_DICDI Peroxisomal biogenesis factor 6 OS=Dictyostelium discoideum GN=pex6
PE=3 SV=1
Length = 1201
Score = 306 bits (784), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 165/384 (42%), Positives = 243/384 (63%), Gaps = 29/384 (7%)
Query: 95 IRKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDL 154
+ +++ F I + E +R +++Y L D G S ++ LS T+ F +L
Sbjct: 792 LSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVS-IKNLSIRTASFLNSNL 850
Query: 155 TCLVRLSVKNKM-----LKQGINKRD-----------LQKEDFQQIYDDLQSRYSDQLDA 198
L++ S N + ++Q +N + +D Q+ ++Q S + A
Sbjct: 851 RALIQRSSINALKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSSIGA 910
Query: 199 PSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGL-KRSGLLLYGPPGTGKTLIAK 252
P +PNVSW+D+GGL+ +K+EI+ T + SG+ KRSG+LL+GPPGTGKTL+AK
Sbjct: 911 PKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKRSGILLFGPPGTGKTLLAK 970
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A+ATEC +NFL+VKGPEL+N YIG+SE+NIR +F KAR A PCV+FFDELDSLAP RG
Sbjct: 971 AIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGNG 1030
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S GVMDRVVSQLLAE+DG+ S DVFI+GATNR DLLD +++RPGRLD+ LY+G+ +
Sbjct: 1031 ADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISSE 1090
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA-- 430
+ +Q +L+A+ RKF L+DDV L +V + P ++GAD Y++ S+A + A IT++
Sbjct: 1091 KENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITASIN 1150
Query: 431 ----PQVKSAPVIVTMDDFLGACS 450
+ ++ +IV + F+ A +
Sbjct: 1151 GEINEEEQNQKLIVYQNHFIKAVN 1174
Score = 40.0 bits (92), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 4/104 (3%)
Query: 237 LLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCV 296
LLL GP G GK + VA + ++ V +L + + + NIRNV +A ++ P +
Sbjct: 670 LLLNGPQGVGKRTLLNRVAKQMGIHVYEVDCYKLYDFVESKKDWNIRNVLEQASNSTPTL 729
Query: 297 VF---FDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQ 337
+ F+ L+ A QE + S + +++ +L +++ +TS
Sbjct: 730 LILKNFEVLEQTAQSMQQEKKESNLSQTLIN-ILKDINDSNTSN 772
>sp|Q6FW67|PEX6_CANGA Peroxisomal biogenesis factor 6 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=PEX6 PE=3 SV=1
Length = 1017
Score = 296 bits (758), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/301 (49%), Positives = 205/301 (68%), Gaps = 13/301 (4%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVK------NKMLKQGINKRDLQKEDFQQIYDDLQSRY 192
+ LS ++G +D+ ++ L+V N L NK + Q + ++S Y
Sbjct: 644 ISTLSLHSAGLSPYDIQYIISLAVADSLRKCNNYLLWRQNKIKVDMISIQNALEKVRSDY 703
Query: 193 SDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK-RSGLLLYGPPGTG 246
S + APS+PNV+W+D+GGLS +K I+ T + SGLK RSG+L YGPPGTG
Sbjct: 704 SASIGAPSIPNVTWDDVGGLSSVKDAIMETIDLPLKHPELFGSGLKKRSGILFYGPPGTG 763
Query: 247 KTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA 306
KTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KAR A PCV+FFDE+DS+A
Sbjct: 764 KTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDEVDSVA 823
Query: 307 PRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD-VFILGATNRVDLLDPAILRPGRLDKSL 365
P+RG + S GVMDR+VSQLLAE+DG+ + D VFI+GATNR DLLD A+LRPGR DK +
Sbjct: 824 PKRGNQGDSGGVMDRIVSQLLAELDGMSSDGDGVFIIGATNRPDLLDEALLRPGRFDKLI 883
Query: 366 YVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
Y+G+ + R Q +++A+ RKFK+S D++ D LV FP +GAD Y++CS+A +A+ R
Sbjct: 884 YLGIADTREKQANIMRALTRKFKVSSDINFDELVSDFPFSYTGADFYALCSDAMLKAMTR 943
Query: 426 I 426
I
Sbjct: 944 I 944
>sp|Q74Z13|PEX6_ASHGO Peroxisomal biogenesis factor 6 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=PEX6
PE=3 SV=1
Length = 1021
Score = 293 bits (750), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 150/289 (51%), Positives = 190/289 (65%), Gaps = 8/289 (2%)
Query: 145 VTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNV 204
+ S E + C R K ML QG R + D + + +SD + AP +PNV
Sbjct: 662 IRSIVESAKVCCYQRSKEKQHMLWQG-GYRYINSADLSAAINKARDEFSDSIGAPKIPNV 720
Query: 205 SWEDIGGLSKLKAEILST------FRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATEC 258
WEDIGGL +K EIL T F + + KRSG+L YGPPGTGKTL+AKAVAT
Sbjct: 721 FWEDIGGLEMVKGEILDTIDMPLKFPELFASGMKKRSGILFYGPPGTGKTLLAKAVATNF 780
Query: 259 RMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGV 318
+NF +VKGPELLN YIG+SE N+R VF +AR A PCV+FFDELDS+AP+RG + S GV
Sbjct: 781 SLNFFSVKGPELLNMYIGESEANVRRVFQRARDAKPCVIFFDELDSVAPKRGNQGDSGGV 840
Query: 319 MDRVVSQLLAEMDGVHTSQD-VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQL 377
MDR+VSQLLAE+DG+ T D +F++GATNR DLLD A+LRPGR DK LY+G+ + Q
Sbjct: 841 MDRIVSQLLAELDGLSTGGDGLFVIGATNRPDLLDEALLRPGRFDKLLYLGISDTNEKQA 900
Query: 378 GVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L+A+ RKF L DVSLD L P +GAD Y++CS+A A+ RI
Sbjct: 901 NILRALTRKFTLDPDVSLDDLAASCPFTYTGADFYALCSDAMLNAMTRI 949
>sp|Q9HG03|PEX6_PENCH Peroxisomal biogenesis factor 6 OS=Penicillium chrysogenum GN=pex6
PE=3 SV=1
Length = 1459
Score = 289 bits (740), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 141/278 (50%), Positives = 194/278 (69%), Gaps = 10/278 (3%)
Query: 162 VKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILS 221
V++ +L G R + K DF + + ++D + AP +PNV W+D+GGL+ +K ++
Sbjct: 985 VRDVLLAGGDGARGVTKADFDAAVEAARKNFADSIGAPKIPNVGWDDVGGLTNVKDALVE 1044
Query: 222 TFR-GVNR----TSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYI 275
T + + R G+K RSG+L YGPPGTGKTL+AKA+ATE +NF +VKGPELLN YI
Sbjct: 1045 TIQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLNMYI 1104
Query: 276 GQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHT 335
G+SE N+R VF +AR A PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+DG++
Sbjct: 1105 GESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMNG 1164
Query: 336 SQD----VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSD 391
++ VF++GATNR DLLD A+LRPGR DK LY+G+ + Q +L+A+ RKF L
Sbjct: 1165 GEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHRKQATILEALTRKFALHP 1224
Query: 392 DVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
DVSLD + P +GAD+Y++CS+A +AI R T+
Sbjct: 1225 DVSLDRVAEQLPLTYTGADLYALCSDAMLKAITRKATA 1262
>sp|P36966|PEX6_YARLI Peroxisomal biogenesis factor 6 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=PEX6 PE=3 SV=2
Length = 1024
Score = 289 bits (739), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 160/364 (43%), Positives = 223/364 (61%), Gaps = 33/364 (9%)
Query: 95 IRKQIQKLFLKTINVLPLTEPERRLLIQYQLDC-LGGDYGFDASL-------VEYLSSVT 146
I + I+ F I + +EP+RR + + GGD +A + VE L+ +
Sbjct: 582 ISEAIRSRFQFEIEIGVPSEPQRRQIFSHLTKSGPGGDSIRNAPISLRSDVSVENLALQS 641
Query: 147 SGFERHDLTCLVR------LSVKNKMLKQGINKR-----------DLQKEDFQQIYDDLQ 189
+G DLT +V+ + NK+ K L DF D +
Sbjct: 642 AGLTPPDLTAIVQTTRLRAIDRLNKLTKDSDTTLDDLLTLSHGTLQLTPSDFDDAIADAR 701
Query: 190 SRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK-RSGLLLYGPP 243
+YSD + AP +PNV W+D+GG+ +K +IL T + + G+K RSG+L YGPP
Sbjct: 702 QKYSDSIGAPRIPNVGWDDVGGMEGVKKDILDTIETPLKYPHWFSDGVKKRSGILFYGPP 761
Query: 244 GTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELD 303
GTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KAR A PCVVFFDELD
Sbjct: 762 GTGKTLLAKAIATTFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVVFFDELD 821
Query: 304 SLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTS--QDVFILGATNRVDLLDPAILRPGRL 361
S+AP+RG + S GVMDR+VSQLLAE+DG+ T+ + VF++GATNR DLLD A+LRPGR
Sbjct: 822 SVAPQRGNQGDSGGVMDRIVSQLLAELDGMSTAGGEGVFVVGATNRPDLLDEALLRPGRF 881
Query: 362 DKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTR 421
DK LY+G+ + Q +++A+ RKF+L+ DVSL+++ P +GAD Y++CS+A
Sbjct: 882 DKMLYLGISDTHEKQQTIMEALTRKFRLAADVSLEAISKRCPFTFTGADFYALCSDAMLN 941
Query: 422 AIRR 425
A+ R
Sbjct: 942 AMTR 945
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 18/205 (8%)
Query: 232 LKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
L S LL G GK+ + ++VA +C ++ + L+ Q+ +R +A
Sbjct: 468 LNTSVLLHSAKRGVGKSTVLRSVAAQCGISVFEISCFGLIGDNEAQTLGTLRAKLDRAYG 527
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLL 351
+PCVV L+S+A + Q+ + G++ ++V +LA+ G V + +N D +
Sbjct: 528 CSPCVVVLQHLESIAKKSDQDGKDEGIVSKLV-DVLADYSG----HGVLLAATSNDPDKI 582
Query: 352 DPAILRPGRLDKSLYVGLYED--------RISQLGVLKAVVRKFKLS--DDVSLDSLVHH 401
AI R + +G+ + +++ G +R +S DVS+++L
Sbjct: 583 SEAIR--SRFQFEIEIGVPSEPQRRQIFSHLTKSGPGGDSIRNAPISLRSDVSVENLALQ 640
Query: 402 FPSQMSGADIYSICSNAWTRAIRRI 426
+ ++ D+ +I RAI R+
Sbjct: 641 -SAGLTPPDLTAIVQTTRLRAIDRL 664
>sp|Q9C1E9|PEX6_COLOR Peroxisomal biogenesis factor 6 OS=Colletotrichum orbiculare (strain
104-T / ATCC 96160 / CBS 514.97 / LARS 414 / MAFF 240422)
GN=PEX6 PE=3 SV=1
Length = 1388
Score = 285 bits (730), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 150/326 (46%), Positives = 206/326 (63%), Gaps = 37/326 (11%)
Query: 160 LSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI 219
++V++ + G R + K DF + + ++ + AP +PNV+W+D+GGL+ +K +
Sbjct: 947 VTVRDLQVAGGAMARCVTKGDFDVAVEAARKNFAGAIGAPKIPNVTWDDVGGLNNVKDAV 1006
Query: 220 LSTFR-GVNR----TSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNK 273
T + + R G+K RSG+L YGPPGTGKTL+AKA+ATE +NF +VKGPELLN
Sbjct: 1007 TETIQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNM 1066
Query: 274 YIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
YIG+SE N+R VF +AR A PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+DG+
Sbjct: 1067 YIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGM 1126
Query: 334 H----TSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
TS VF++GATNR DLLDPA+LRPGR DK LY+G+ + QL +L+A+ RKF L
Sbjct: 1127 SGGDDTSGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQLKILEALTRKFTL 1186
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA----------PQVKSAP-- 437
VSL S+ P +GAD Y++CS+A +A+ R S P+ ++ P
Sbjct: 1187 HPSVSLHSVAQQLPFTYTGADFYALCSDAMLKAVTRQAASVDAKIRELEAQPRSRTGPIS 1246
Query: 438 ---------------VIVTMDDFLGA 448
V+VT +DFL A
Sbjct: 1247 TAYFFDHHATPEDIAVMVTEEDFLAA 1272
>sp|P33760|PEX6_YEAST Peroxisomal ATPase PEX6 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX6 PE=1 SV=1
Length = 1030
Score = 283 bits (724), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 139/258 (53%), Positives = 183/258 (70%), Gaps = 7/258 (2%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TS 230
+ +ED + ++ +S + AP +PNV+W+DIGG+ +K EIL T + TS
Sbjct: 701 ITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS 760
Query: 231 GLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKA 289
G+K RSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KA
Sbjct: 761 GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 820
Query: 290 RSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD-VFILGATNRV 348
R A PCV+FFDE+DS+AP+RG + S GVMDR+VSQLLAE+DG+ T D VF++GATNR
Sbjct: 821 REAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRP 880
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
DLLD A+LRPGR DK LY+G+ + QL +L+A+ RKF L +DV L L P +G
Sbjct: 881 DLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTG 940
Query: 409 ADIYSICSNAWTRAIRRI 426
AD Y++CS+A A+ RI
Sbjct: 941 ADFYALCSDAMLNAMSRI 958
>sp|Q9UVU5|PEX6_PICAN Peroxisomal biogenesis factor 6 OS=Pichia angusta GN=PEX6 PE=1 SV=1
Length = 1135
Score = 283 bits (723), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 163/368 (44%), Positives = 222/368 (60%), Gaps = 45/368 (12%)
Query: 94 LIRKQIQKLFLKTINVLPLTEPERRLLIQYQLD----------CLGGDYGFDASLVEYLS 143
LIR + + F +INV TEPER+L++ LD L D D L+
Sbjct: 682 LIRSKFK--FDISINVP--TEPERKLILTDLLDDMKTKDKTPVVLRPDVSLDT-----LA 732
Query: 144 SVTSGFERHDLTCLV------------RLSVKNK-----MLKQGINKRDLQKEDFQQIYD 186
++G +DL +V RLS + K +L + L EDF+ +
Sbjct: 733 LQSAGLTANDLVSIVDNTITIAIERLERLSEEQKVNWDQLLSFNGGRIKLTPEDFETSIN 792
Query: 187 DLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL------KRSGLLLY 240
D ++++SD + AP +P+V WED+GGL +K EIL T + L KRSG+L Y
Sbjct: 793 DARNKFSDMIGAPRIPDVKWEDVGGLDVVKDEILDTIEMPLKHPELFSKGMKKRSGILFY 852
Query: 241 GPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFD 300
GPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KAR A PCV+FFD
Sbjct: 853 GPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFD 912
Query: 301 ELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQ---DVFILGATNRVDLLDPAILR 357
ELDS+AP+RG + S GVMDR+VSQLLAE+DG+ ++ VF++GATNR DLLD A+LR
Sbjct: 913 ELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGAEGGDGVFVVGATNRPDLLDEALLR 972
Query: 358 PGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSN 417
PGR DK LY+G+ + Q +++A+ RKF+L V L + P +GAD Y++CS+
Sbjct: 973 PGRFDKMLYLGIADTHEKQAKIIQALTRKFQLDPSVDLGRIAETCPFTYTGADFYALCSD 1032
Query: 418 AWTRAIRR 425
A A+ R
Sbjct: 1033 AMLNAMTR 1040
Score = 43.1 bits (100), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 18/191 (9%)
Query: 246 GKTLIAKAVATECRMNFLAVKGPELLNKY-IGQSEENIRNVFLKA-RSAAPCVVFFDELD 303
GK + + +ATE N L + +LLN+ + ++ IR + S +++ ++
Sbjct: 576 GKATLVRRIATEFGANLLELDAYDLLNQASVSKTIGTIRGKSDRVVDSCCSVILYIRHIE 635
Query: 304 SLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDK 363
+LA + Q M S LAE+ +TS+ +G+TN D + I + D
Sbjct: 636 ALAKKPDPNQQQKDSM----SLRLAELIDEYTSKGAIFIGSTNDADAISELIRSKFKFDI 691
Query: 364 SLYVGLYEDRISQLGVLKAVVRKFKLSD--------DVSLDSLVHHFPSQMSGADIYSIC 415
S+ V +R +L +L ++ K D DVSLD+L + ++ D+ SI
Sbjct: 692 SINVPTEPER--KL-ILTDLLDDMKTKDKTPVVLRPDVSLDTLALQ-SAGLTANDLVSIV 747
Query: 416 SNAWTRAIRRI 426
N T AI R+
Sbjct: 748 DNTITIAIERL 758
>sp|Q7SGP2|PEX6_NEUCR Peroxisomal biogenesis factor 6 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=pex-6 PE=3 SV=1
Length = 1381
Score = 280 bits (716), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 140/279 (50%), Positives = 189/279 (67%), Gaps = 10/279 (3%)
Query: 160 LSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI 219
++ ++ L G L K+DF+ D + ++D + AP +PNV+W+D+GGL +K I
Sbjct: 944 ITFRDVQLAGGPAASGLTKQDFELAVDAARKNFADSIGAPKIPNVTWDDVGGLGNVKDAI 1003
Query: 220 LSTFR-GVNR----TSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNK 273
T + + R G+K RSG+L YGPPGTGKTL+AKA+ATE +NF +VKGPELLN
Sbjct: 1004 TETIQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNM 1063
Query: 274 YIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD-- 331
YIG+SE N+R VF +AR A PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+D
Sbjct: 1064 YIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGM 1123
Query: 332 --GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
G VF++GATNR DLLDPA+LRPGR DK LY+G+ + Q+ +++A+ RKF L
Sbjct: 1124 SGGEGGGGGVFVIGATNRPDLLDPALLRPGRFDKMLYLGVSDTHDKQVTIMEALTRKFTL 1183
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIIT 428
VSL S+ P +GAD Y++CS+A +A+ R T
Sbjct: 1184 HPTVSLRSVAERLPFTYTGADFYALCSDAMLKAVTRQAT 1222
>sp|Q6CPV1|PEX6_KLULA Peroxisomal biogenesis factor 6 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=PEX6 PE=3 SV=1
Length = 1000
Score = 277 bits (709), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 141/297 (47%), Positives = 200/297 (67%), Gaps = 11/297 (3%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDL--QKEDFQQIYDDLQSRYSDQL 196
++ +S ++G D+ +V+ +VK K Q + + DL D + + + R+SD +
Sbjct: 634 LQTVSVQSAGLTPMDIRSIVK-AVKYKCY-QRLKQNDLLIDMTDITAVINIARDRFSDSI 691
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK-RSGLLLYGPPGTGKTLI 250
AP +PNV+W+DIGG+ +K EI+ T + +SG+K RSG+L YGPPGTGKTL+
Sbjct: 692 GAPKIPNVTWDDIGGMDVVKGEIMDTIDMPLKHPELFSSGMKKRSGILFYGPPGTGKTLL 751
Query: 251 AKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG 310
AKA+A+ +NF +VKGPELLN YIG+SE N+R VF KAR A PCV+FFDELDS+AP+RG
Sbjct: 752 AKAIASNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDAKPCVIFFDELDSVAPKRG 811
Query: 311 QEDQSSGVMDRVVSQLLAEMDGVHTSQD-VFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
+ S GVMDR+VSQLLAE+DG+ + D VF++GATNR DLLD A+LRPGR DK LY+G+
Sbjct: 812 NQGDSGGVMDRIVSQLLAELDGMSSGGDGVFVIGATNRPDLLDEALLRPGRFDKMLYLGI 871
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+ Q ++KA+ RKF L + + + P +GAD Y++CS+A A+ R+
Sbjct: 872 SDTDKKQANIIKALTRKFTLESGIDILDIAKKCPFNYTGADFYALCSDALLNAMTRV 928
Score = 41.2 bits (95), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 122/281 (43%), Gaps = 40/281 (14%)
Query: 207 EDIGGLSKLKAEILST-FRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAV 265
ED +K +IL+T + R + S +L P GKT++ ++V E + + V
Sbjct: 428 EDAFPFAKRLKDILNTAIKCSARNVNVGTSIMLHSSSPNVGKTMLTRSVCAELGFHLIHV 487
Query: 266 ---------KGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDS-LAPRRGQEDQS 315
+ NK IG I + V+F L++ L + Q+D +
Sbjct: 488 DCLSLTSNSNTSDATNKTIGYIRAKIETII---SYVEKVVIFLSHLETILEDEQNQQDNT 544
Query: 316 SGVMDRVVSQLLAEMDGVHTSQ---DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S M R ++ +A++ +T++ VF+ G+TN +D + PAI+R R+ + V + +
Sbjct: 545 SSKMARQMNVEMADLIEEYTTKYKGTVFV-GSTNDIDNI-PAIVR-SRIKFEIDVPVPTE 601
Query: 373 RISQLGVLKAVVRKFKL-SDDVSLDSLV-HHFPSQ--------MSGADIYSICSNAWTRA 422
+ +L + + + L S L SL+ H+ P Q ++ DI SI +
Sbjct: 602 K-QRLQMFRWYFDPYVLNSQTPKLRSLISHNVPLQTVSVQSAGLTPMDIRSIVKAVKYKC 660
Query: 423 IRRIITSAPQVKSAPVIVTMDDFLGACSLATAPDKFSQSVA 463
+R+ K +++ M D ++A D+FS S+
Sbjct: 661 YQRL-------KQNDLLIDMTDITAVINIAR--DRFSDSIG 692
>sp|Q6BS73|PEX6_DEBHA Peroxisomal biogenesis factor 6 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=PEX6 PE=3 SV=2
Length = 1198
Score = 263 bits (672), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/258 (52%), Positives = 180/258 (69%), Gaps = 11/258 (4%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK 233
EDF + +D ++++SD + AP +P+V WEDIGGL +K EI+ T + ++GLK
Sbjct: 811 EDFNKAINDARNQFSDSIGAPRIPDVKWEDIGGLDLVKDEIMDTIDMPLKHPELFSNGLK 870
Query: 234 -RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
RSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KAR A
Sbjct: 871 KRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKARDA 930
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD-----GVHTSQDVFILGATNR 347
PCV+FFDELDS+AP+RG + S GVMDR+VSQLLAE+D VF++GATNR
Sbjct: 931 KPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSGGAEGGGDGVFVVGATNR 990
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
DLLD A+LRPGR DK LY+G+ + Q +L+A+ RKFKL+D+V L + +
Sbjct: 991 PDLLDEALLRPGRFDKMLYLGISDTDEKQSKILEALTRKFKLADNVDLYEIAKRCSFTFT 1050
Query: 408 GADIYSICSNAWTRAIRR 425
GAD Y++CS++ A+ R
Sbjct: 1051 GADFYALCSDSMLNAMTR 1068
>sp|P33289|PEX6_PICPA Peroxisomal biogenesis factor 6 OS=Komagataella pastoris GN=PEX6 PE=3
SV=1
Length = 1165
Score = 259 bits (662), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 134/257 (52%), Positives = 175/257 (68%), Gaps = 9/257 (3%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL------ 232
ED ++ + ++++SD + AP +PNV WED+GGL +K EIL T + L
Sbjct: 791 EDVEKSINTARNKFSDSIGAPRIPNVKWEDVGGLDVVKDEILDTIDMPMKHPELFSNGIK 850
Query: 233 KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
KRSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF +AR A
Sbjct: 851 KRSGILFYGPPGTGKTLLAKAIATNFALNFFSVKGPELLNMYIGESEANVRKVFQRARDA 910
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEM---DGVHTSQDVFILGATNRVD 349
PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+ G VF++GATNR D
Sbjct: 911 KPCVVFFDELDSVAPKRGNQGDSEGVMDRIVSQLLAELDGMSGGDGGDGVFVVGATNRPD 970
Query: 350 LLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGA 409
LLD A+LRPGR DK LY+G+ + Q +++A+ RKF L V LD + P +GA
Sbjct: 971 LLDEALLRPGRFDKMLYLGVSDTHEKQSKIMEALSRKFHLHPSVDLDKVAESCPFTFTGA 1030
Query: 410 DIYSICSNAWTRAIRRI 426
D Y++CS+A A+ RI
Sbjct: 1031 DFYALCSDAMLNAMTRI 1047
Score = 35.0 bits (79), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 33/129 (25%), Positives = 56/129 (43%), Gaps = 20/129 (15%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGV-------NRTSGLKRSGLLLYGPPGTGKTLIAK 252
S PNVS G++ E T R + +R L+ + LL GK+L+
Sbjct: 527 SFPNVS-----GVTTSTFEYAKTLRKLIKATIDPSRLVNLQTTVLLSSLSRAIGKSLLVH 581
Query: 253 AVATECRMNFLAVKGPELLN-----KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
++A EC ++ + + G E+LN K IG + V P +VF +++L
Sbjct: 582 SLALECGVHLVEIDGYEVLNPSSESKTIGTIRGKLDRV---VEGCTPLIVFIKHIEALTK 638
Query: 308 RRGQEDQSS 316
+ Q+ + S
Sbjct: 639 KSEQQQKDS 647
>sp|O13764|PEX6_SCHPO Peroxisomal ATPase pex6 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=pex6 PE=3 SV=1
Length = 948
Score = 254 bits (649), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 122/234 (52%), Positives = 171/234 (73%), Gaps = 8/234 (3%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK-RSGLLLYGPPGTGKTLIAKA 253
+VP V+W+DIGGL + K + T + + + GLK RSG+LLYGPPGTGKTL+AKA
Sbjct: 648 TVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKA 707
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VATE + F+++KGPELLN Y+G+SE N+RNVF KAR+++PCV+FFDELDS+AP RG
Sbjct: 708 VATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSS 767
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQD--VFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S VMDRVVSQLLAE+D + + VF++GATNR DLLDP++LRPGR DK +Y+G+ +
Sbjct: 768 DSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINK 827
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
S+ +L+A+ + FKL + + L+ + + +GAD+Y++CS+A AI+R
Sbjct: 828 SEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881
>sp|O28972|Y1297_ARCFU Cell division cycle protein 48 homolog AF_1297 OS=Archaeoglobus
fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM
9628 / NBRC 100126) GN=AF_1297 PE=3 SV=1
Length = 733
Score = 236 bits (603), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 132/310 (42%), Positives = 199/310 (64%), Gaps = 25/310 (8%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDF-QQIYDDLQSRYSDQLD 197
+E L+ +T+GF DL L + + + L++ + + D++ E+ ++ ++L+ D ++
Sbjct: 374 LEELAELTNGFVGADLEALCKEAAMH-ALRRVLPEIDIEAEEIPAEVIENLKVTREDFME 432
Query: 198 A-----PS--------VPNVSWEDIGGLSKLKAEILST------FRGVNRTSGLKRS-GL 237
A PS VPNV WEDIGGL K E++ + V R + +K G+
Sbjct: 433 ALKNIEPSAMREVLVEVPNVKWEDIGGLEHAKQELMEAVEWPLKYPEVFRAANIKPPRGI 492
Query: 238 LLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVV 297
LL+GPPGTGKTL+AKAVA E NF++VKGPELL+K++G+SE+++R +F KAR APCV+
Sbjct: 493 LLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKARQVAPCVI 552
Query: 298 FFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILR 357
FFDE+DSLAPRRG S V +RVVSQLL E+DG+ +DV ++ ATNR D++DPA+LR
Sbjct: 553 FFDEIDSLAPRRGGIGDSH-VTERVVSQLLTELDGLEELKDVVVIAATNRPDMIDPALLR 611
Query: 358 PGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSN 417
PGRL++ +Y+ D+ +++ + K +R L+DDV+++ L SGADI ++C
Sbjct: 612 PGRLERHIYIP-PPDKKARVEIFKIHLRGKPLADDVNIEELAEKT-EGYSGADIEAVCRE 669
Query: 418 AWTRAIRRII 427
A AIR +I
Sbjct: 670 AGMLAIRELI 679
Score = 190 bits (483), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/271 (40%), Positives = 163/271 (60%), Gaps = 34/271 (12%)
Query: 200 SVPNVSWEDIGGLSK------------LKAEILSTFRGVNRTSGLKRSGLLLYGPPGTGK 247
+VP+V++EDIGGL + LK L G+ G+ LLYGPPGTGK
Sbjct: 175 AVPDVTYEDIGGLKRELRLVREMIELPLKHPELFQRLGIEPPKGV-----LLYGPPGTGK 229
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
TLIAKAVA E +F+ + GPE+++KY G+SE+ +R +F +A+ AP ++F DE+DS+AP
Sbjct: 230 TLIAKAVANEVDAHFIPISGPEIMSKYYGESEQRLREIFEEAKENAPSIIFIDEIDSIAP 289
Query: 308 RRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYV 367
+R E+ + V RVV+QLLA MDG+ DV ++ ATNR D +DPA+ RPGR D+ + +
Sbjct: 290 KR--EEVTGEVERRVVAQLLALMDGLEARGDVIVIAATNRPDAIDPALRRPGRFDREIEI 347
Query: 368 GLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
G+ D+ + +L+ RK L++DV L+ L + GAD+ ++C A A+RR++
Sbjct: 348 GV-PDKEGRKEILEIHTRKMPLAEDVDLEELA-ELTNGFVGADLEALCKEAAMHALRRVL 405
Query: 428 TSAPQVK------SAPVI----VTMDDFLGA 448
P++ A VI VT +DF+ A
Sbjct: 406 ---PEIDIEAEEIPAEVIENLKVTREDFMEA 433
>sp|Q58556|Y1156_METJA Cell division cycle protein 48 homolog MJ1156 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ1156 PE=3 SV=1
Length = 903
Score = 236 bits (602), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 129/310 (41%), Positives = 198/310 (63%), Gaps = 25/310 (8%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDF-QQIYDDLQSRYSDQLD 197
++YL+ VT GF DL L + + L++ + DL+ E+ +++ D+L+ D +
Sbjct: 371 LDYLADVTHGFVGADLAALCK-EAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDFKE 429
Query: 198 A-----PS--------VPNVSWEDIGGLSKLKAEILSTF------RGVNRTSGLKR-SGL 237
A PS VPNV WEDIGGL ++K E+ + V G++ G+
Sbjct: 430 ALKDVEPSAMREVLVEVPNVKWEDIGGLEEVKQELREAVEWPLKAKEVFEKIGVRPPKGV 489
Query: 238 LLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVV 297
LL+GPPGTGKTL+AKAVA E NF++VKGPE+ +K++G+SE+ IR +F KAR +APC++
Sbjct: 490 LLFGPPGTGKTLLAKAVANESGANFISVKGPEIFSKWVGESEKAIREIFRKARQSAPCII 549
Query: 298 FFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILR 357
FFDE+D++AP+RG+ D SS V D+VV+QLL E+DG+ +DV ++ ATNR D++DPA+LR
Sbjct: 550 FFDEIDAIAPKRGR-DLSSAVTDKVVNQLLTELDGMEEPKDVVVIAATNRPDIIDPALLR 608
Query: 358 PGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSN 417
PGRLD+ + V + +++ ++L + K R L++DV+L+ L +GADI ++C
Sbjct: 609 PGRLDRVILVPVPDEK-ARLDIFKIHTRSMNLAEDVNLEELAKKT-EGYTGADIEALCRE 666
Query: 418 AWTRAIRRII 427
A A+R I
Sbjct: 667 AAMLAVRESI 676
Score = 194 bits (494), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 168/284 (59%), Gaps = 28/284 (9%)
Query: 180 DFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL------- 232
DF + +L+ ++ VP+V++EDIGGL + ++ R L
Sbjct: 154 DFTHV--ELKEEPVSEIKETKVPDVTYEDIGGLKEEVKKVREMIELPMRHPELFEKLGIE 211
Query: 233 KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
G+LL GPPGTGKTL+AKAVA E NF + GPE+++KY+G++EEN+R +F +A
Sbjct: 212 PPKGVLLVGPPGTGKTLLAKAVANEAGANFYVINGPEIMSKYVGETEENLRKIFEEAEEN 271
Query: 293 APCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLL 351
AP ++F DE+D++AP+R D+++G V R+V+QLL MDG+ V ++GATNR + L
Sbjct: 272 APSIIFIDEIDAIAPKR---DEATGEVERRLVAQLLTLMDGLKGRGQVVVIGATNRPNAL 328
Query: 352 DPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSG 408
DPA+ RPGR D+ + +G+ DR + +L+ R L++DV LD L H F G
Sbjct: 329 DPALRRPGRFDREIVIGV-PDREGRKEILQIHTRNMPLAEDVDLDYLADVTHGF----VG 383
Query: 409 ADIYSICSNAWTRAIRRIITSAP-QVKSAP------VIVTMDDF 445
AD+ ++C A RA+RR++ S + + P + VTMDDF
Sbjct: 384 ADLAALCKEAAMRALRRVLPSIDLEAEEIPKEVLDNLKVTMDDF 427
>sp|Q96372|CDC48_CAPAN Cell division cycle protein 48 homolog OS=Capsicum annuum GN=CAFP
PE=2 SV=1
Length = 805
Score = 232 bits (592), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/235 (51%), Positives = 158/235 (67%), Gaps = 10/235 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V ++ G+L YGPPG GKTL+AKA
Sbjct: 475 VPNVSWEDIGGLENVKRELQETVQYPVEPPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSS 594
Query: 314 -QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG++ + VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 595 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PD 653
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ + KA +RK LS D+ L +L H SGAD+ IC A AIR I
Sbjct: 654 EDSRHQIFKACLRKSPLSKDIDLRALAKHT-QGFSGADVTEICQRACKYAIRENI 707
Score = 163 bits (412), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 140/238 (58%), Gaps = 17/238 (7%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I R L +S G+LLYGPPG+GKTL
Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 318 --EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIR 424
D + +L VL + KL+++V L+ + H + GAD+ ++C+ A + IR
Sbjct: 376 -PDEVGRLEVLGIHTKNMKLAEEVDLERISKDTHGY----VGADLAALCTEAALQCIR 428
>sp|P54774|CDC48_SOYBN Cell division cycle protein 48 homolog OS=Glycine max GN=CDC48 PE=2
SV=1
Length = 807
Score = 229 bits (585), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 119/235 (50%), Positives = 157/235 (66%), Gaps = 10/235 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V ++ G+L YGPPG GKTL+AKA
Sbjct: 475 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 535 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSV 594
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG+ + VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 595 GDAGGAADRVLNQLLTEMDGMSAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PD 653
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ + KA +RK ++ +V L +L H SGADI IC A AIR I
Sbjct: 654 EDSRHQIFKACLRKSPIAKNVDLRALARHT-QGFSGADITEICQRACKYAIRENI 707
Score = 169 bits (428), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/235 (40%), Positives = 140/235 (59%), Gaps = 11/235 (4%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I R L +S G+LLYGPPG+GKTL
Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 318 --EKTHGEVERRIVSQLLTLMDGLKSRAHVIVIGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D + +L VL+ + KLSDDV L+ + + GAD+ ++C+ A + IR
Sbjct: 376 -PDEVGRLEVLRIHTKNMKLSDDVDLERIAKDTHGYV-GADLAALCTEAALQCIR 428
>sp|Q9LZF6|CD48E_ARATH Cell division control protein 48 homolog E OS=Arabidopsis thaliana
GN=CDC48E PE=1 SV=2
Length = 810
Score = 229 bits (583), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 158/235 (67%), Gaps = 10/235 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V ++ G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 534 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSA 593
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG++ + VFI+GATNR D++D A+LRPGRLD+ +Y+ L D
Sbjct: 594 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL-PD 652
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+L + KA +RK ++ DV + +L + SGADI IC A AIR I
Sbjct: 653 EDSRLNIFKACLRKSPVAKDVDVTALA-KYTQGFSGADITEICQRACKYAIRENI 706
Score = 167 bits (424), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 142/238 (59%), Gaps = 17/238 (7%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I R L +S G+LLYGPPG+GKTL
Sbjct: 197 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E + V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 317 --EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + H + GAD+ ++C+ A + IR
Sbjct: 375 -PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGY----VGADLAALCTEAALQCIR 427
>sp|Q8SSJ5|CDC48_ENCCU Cell division control protein 48 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=CDC48 PE=1 SV=1
Length = 780
Score = 228 bits (581), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 113/233 (48%), Positives = 159/233 (68%), Gaps = 9/233 (3%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-------GVNRTSGLKRSGLLLYGPPGTGKTLIAKAV 254
PNV W DIGGL ++K E+ T + + G+L YGPPG GKTL+AKAV
Sbjct: 476 PNVKWSDIGGLEQVKQELRETVQYPVEYPEKFIKFGMTPAKGVLFYGPPGCGKTLLAKAV 535
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
ATEC+ NF+++KGPELL+ ++G+SE NIR++F +AR AAPCV+FFDE+DS+A R D
Sbjct: 536 ATECKANFISIKGPELLSMWVGESESNIRDLFARARGAAPCVLFFDEIDSIAKARSGNDG 595
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
SSG DR+++QLL+EMDG++ ++VF++GATNR D LD A++RPGRLD+ +Y+ L D
Sbjct: 596 SSGATDRMLNQLLSEMDGINQKKNVFVIGATNRPDQLDSALMRPGRLDQLVYIPL-PDLD 654
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S++ +L+A ++K LS ++ L L + SGAD+ IC A AIR I
Sbjct: 655 SRVSILQATLKKTPLSPEIDLRQLAEA-TDKFSGADLSEICQRACKLAIRETI 706
Score = 164 bits (414), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/240 (39%), Positives = 142/240 (59%), Gaps = 20/240 (8%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTS------GLKR-SGLLLYGPPGTGKTLIAKAVAT 256
V ++D+GG A+I R S G+K G+LLYGPPGTGKTLIA+A+A
Sbjct: 205 VGYDDVGGCRAQMAKIRELVELPLRHSQLYSKIGVKPPKGILLYGPPGTGKTLIARAIAN 264
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K G+SE N+R F +A +P ++F DE+D+LAP+R E
Sbjct: 265 ETGAFLFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDALAPKR--EKSQG 322
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V R+VSQLL MDG+ +V +LGATNR + +DPA+ R GR D+ + +G+ D +
Sbjct: 323 EVERRIVSQLLTLMDGMKARSNVIVLGATNRPNSIDPALRRYGRFDREIEIGV-PDETGR 381
Query: 377 LGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQV 433
L +L+ + K+S+DV L ++ +H F +G+D+ S+CS A + IR + PQ+
Sbjct: 382 LEILRIHTKNMKMSEDVDLVAINKELHGF----TGSDLASLCSEAALQQIREKL---PQI 434
>sp|O43933|PEX1_HUMAN Peroxisome biogenesis factor 1 OS=Homo sapiens GN=PEX1 PE=1 SV=1
Length = 1283
Score = 228 bits (580), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 130/323 (40%), Positives = 203/323 (62%), Gaps = 20/323 (6%)
Query: 120 LIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD---L 176
+I+ +LDC + D L ++++ T GF D T LV ++ +++ +Q I+ R+ L
Sbjct: 752 VIKNKLDCDINKFT-DLDL-QHVAKETGGFVARDFTVLVDRAIHSRLSRQSISTREKLVL 809
Query: 177 QKEDFQQIYDDL--QSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL-- 232
DFQ+ S S L P ++ W+ IGGL +++ ++ T + + L
Sbjct: 810 TTLDFQKALRGFLPASLRSVNLHKPR--DLGWDKIGGLHEVRQILMDTIQLPAKYPELFA 867
Query: 233 -----KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFL 287
+R+G+LLYGPPGTGKTL+A +A E RMNF++VKGPELL+KYIG SE+ +R++F+
Sbjct: 868 NLPIRQRTGILLYGPPGTGKTLLAGVIARESRMNFISVKGPELLSKYIGASEQAVRDIFI 927
Query: 288 KARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
+A++A PC++FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R
Sbjct: 928 RAQAAKPCILFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSR 985
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
DL+DPA+LRPGRLDK +Y D++S+L +L + L+DDV L V +
Sbjct: 986 PDLIDPALLRPGRLDKCVYCP-PPDQVSRLEILNVLSDSLPLADDVDLQH-VASVTDSFT 1043
Query: 408 GADIYSICSNAWTRAIRRIITSA 430
GAD+ ++ NA A+ ++ S+
Sbjct: 1044 GADLKALLYNAQLEALHGMLLSS 1066
Score = 42.4 bits (98), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 80/176 (45%), Gaps = 32/176 (18%)
Query: 176 LQKEDFQQIYDDL-QSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTF------RGVNR 228
LQK Q + D + + S+++D +P + +GG++ L L R ++R
Sbjct: 523 LQKTTIQVLLDPMVKEENSEEIDF-ILPFLKLSSLGGVNSLGVSSLEHITHSLLGRPLSR 581
Query: 229 -----TSGLKRSGLLLYGPPGTGKTLIAKAVATEC---------RMNFLAVKGPELLNKY 274
+GL+ LLL G G+GK+ +AKA+ E R++ A++G L N
Sbjct: 582 QLMSLVAGLRNGALLLTGGKGSGKSTLAKAICKEAFDKLDAHVERVDCKALRGKRLEN-- 639
Query: 275 IGQSEENIRNVFLKARSAAPCVVFFDELDSLA--PRRGQEDQSSGVMDRVVSQLLA 328
++ + F +A P VV D+LD +A P + + S D V SQ LA
Sbjct: 640 ---IQKTLEVAFSEAVWMQPSVVLLDDLDLIAGLPAVPEHEHSP---DAVQSQRLA 689
>sp|Q9SCN8|CD48D_ARATH Cell division control protein 48 homolog D OS=Arabidopsis thaliana
GN=CDC48D PE=1 SV=1
Length = 815
Score = 227 bits (578), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/235 (49%), Positives = 158/235 (67%), Gaps = 10/235 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V ++ G+L YGPPG GKTL+AKA
Sbjct: 475 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 535 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSV 594
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG++ + VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 595 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PD 653
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ + K+ +RK ++ DV L +L + SGADI IC + AIR I
Sbjct: 654 EESRYQIFKSCLRKSPVAKDVDLRALA-KYTQGFSGADITEICQRSCKYAIRENI 707
Score = 166 bits (421), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 141/238 (59%), Gaps = 17/238 (7%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I R L +S G+LLYGPPG+GKTL
Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 318 --EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + H + GAD+ ++C+ A + IR
Sbjct: 376 -PDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGY----VGADLAALCTEAALQCIR 428
>sp|Q7KN62|TERA_DROME Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila
melanogaster GN=TER94 PE=1 SV=1
Length = 801
Score = 226 bits (577), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 118/237 (49%), Positives = 162/237 (68%), Gaps = 10/237 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA
Sbjct: 468 VPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKA 527
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF++VKGPELL + G+SE N+R++F KARSAAPCV+FFDELDS+A RG
Sbjct: 528 IANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNV 587
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++Q+L EMDG+ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +D
Sbjct: 588 GDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDD 647
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S+ +LKA +RK L+ +V L + + SGAD+ IC A AIR+ I +
Sbjct: 648 K-SREAILKANLRKSPLAKEVDL-TYIAKVTQGFSGADLTEICQRACKLAIRQAIEA 702
Score = 164 bits (415), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/233 (39%), Positives = 139/233 (59%), Gaps = 13/233 (5%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+L+YGPPGTGKTLIA+
Sbjct: 194 SLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIAR 253
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A +P ++F DE+D++AP+R
Sbjct: 254 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--- 310
Query: 313 DQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
D++ G V R+VSQLL MDG+ S + ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 311 DKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGI-P 369
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D +L VL+ + KL DDV L+ + + GAD+ S+CS A + IR
Sbjct: 370 DATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHV-GADLASLCSEAALQQIR 421
>sp|Q9DBY8|NVL_MOUSE Nuclear valosin-containing protein-like OS=Mus musculus GN=Nvl PE=1
SV=1
Length = 855
Score = 224 bits (570), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 120/240 (50%), Positives = 166/240 (69%), Gaps = 12/240 (5%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R + RT GL +G+LL GPPG GKTL+AK
Sbjct: 573 TVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAK 632
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 633 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 690
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--Y 370
D+ +G RVV+QLL EMDG+ T Q VFIL ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 691 DRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRRIITS 429
DR++ L + K L +DV+L+++ + +GAD+ ++ A A+R+ IT+
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITA 810
Score = 152 bits (383), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 163/309 (52%), Gaps = 26/309 (8%)
Query: 172 NKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGLSKLKAEILSTFRGVN 227
NKR + E+ Q++ ++++ + A S + NV +ED+GG E+ +
Sbjct: 227 NKR--KTENLQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMR 284
Query: 228 RTSGLKR------SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEEN 281
+ G+LL+GPPG GKTL+A A+A E + L V PE+++ G+SE+
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 282 IRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD---GVHTSQD 338
+R +F +A S APC+VF DE+D++ P+R E S + R+V+QLL MD V +
Sbjct: 345 LRELFDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATAR 402
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++GATNR D LDPA+ R GR D+ + +G+ D ++ +L+ + RK +L + + L
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGI-PDEAARERILQTLCRKLRLPETFNFCHL 461
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRII-------TSAPQVKSAPVIVTMDDFLGACSL 451
H P GAD+ ++C A A+ R++ P+++ P ++ LGA
Sbjct: 462 AHLTPG-FVGADLMALCREAAMCAVNRVLMKQQAQQKKKPEIEGLPSEGDQEERLGAEPT 520
Query: 452 ATAPDKFSQ 460
+ D+ +
Sbjct: 521 SETQDELQR 529
>sp|P54812|TERA2_CAEEL Transitional endoplasmic reticulum ATPase homolog 2
OS=Caenorhabditis elegans GN=cdc-48.2 PE=1 SV=2
Length = 810
Score = 224 bits (570), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 117/235 (49%), Positives = 159/235 (67%), Gaps = 10/235 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA
Sbjct: 476 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 535
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 536 IANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSV 595
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 596 GDAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-PD 654
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+L + KA +RK LS D+ L+ L + SGAD+ IC A AIR I
Sbjct: 655 EASRLQIFKASLRKTPLSADLDLNFLAKNTVG-FSGADLTEICQRACKLAIRESI 708
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 89/231 (38%), Positives = 135/231 (58%), Gaps = 17/231 (7%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAKAVAT 256
V ++D+GG+ K A+I R L ++ G+LL+GPPGTGKTLIA+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E F + GPE+++K G+SE N+R F + +P ++F DE+D++AP+R E
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR--EKAHG 323
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V R+VSQLL MDG+ T V ++ ATNR + +D A+ R GR D+ + +G+ D + +
Sbjct: 324 EVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGI-PDAVGR 382
Query: 377 LGVLKAVVRKFKLSDDVSLDSLV---HHFPSQMSGADIYSICSNAWTRAIR 424
L +L+ + KL +DV L+ + H F GAD+ S+CS A + IR
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGF----VGADLASLCSEAAIQQIR 429
>sp|Q7ZU99|TERA_DANRE Transitional endoplasmic reticulum ATPase OS=Danio rerio GN=vcp
PE=1 SV=1
Length = 806
Score = 223 bits (569), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 160/232 (68%), Gaps = 10/232 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAKA 253
VPN++WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AKA
Sbjct: 471 VPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQE 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNV 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ + ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ S++ +LKA +RK +S DV LD L + SGAD+ IC A AIR
Sbjct: 651 K-SRIAILKANLRKSPISKDVDLDFLA-KMTNGFSGADLTEICQRACKLAIR 700
Score = 174 bits (442), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 159/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG+ K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|Q5AWS6|CDC48_EMENI Cell division control protein 48 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=cdc48 PE=1 SV=2
Length = 823
Score = 222 bits (566), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 133/317 (41%), Positives = 196/317 (61%), Gaps = 32/317 (10%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQ-QIYDDL-----QSRY 192
+E +++ T G+ DL L + + +++ ++ DL ++ ++ D L RY
Sbjct: 417 LETIAAETHGYVGSDLASLCSEAAMQQ-IREKMDLIDLDEDTIDAEVLDSLGVTMENFRY 475
Query: 193 SDQLDAPS---------VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKRSGL----- 237
+ + PS VPNV WEDIGGL ++K E++ + + V+ ++ GL
Sbjct: 476 ALGVSNPSALREVAVVEVPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRG 535
Query: 238 -LLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCV 296
L YGPPGTGKT++AKAVA EC NF++VKGPELL+ + G+SE NIR++F KAR+AAPCV
Sbjct: 536 VLFYGPPGTGKTMLAKAVANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCV 595
Query: 297 VFFDELDSLAPRRGQE-DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAI 355
VF DELDS+A RG + G DRVV+QLL EMDG+ + ++VF++GATNR + LD A+
Sbjct: 596 VFLDELDSIAKSRGGSVGDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAAL 655
Query: 356 LRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLD---SLVHHFPSQMSGADIY 412
+RPGRLD +YV L D+ S+ G+LKA +RK ++ DV ++ S H F SGAD+
Sbjct: 656 VRPGRLDTLVYVPL-PDQASREGILKAQLRKTPVASDVDIEFIASKTHGF----SGADLG 710
Query: 413 SICSNAWTRAIRRIITS 429
+ A AI+ I++
Sbjct: 711 FVTQRAVKLAIKESISA 727
Score = 161 bits (408), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/228 (39%), Positives = 135/228 (59%), Gaps = 11/228 (4%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAKAVAT 256
V ++DIGG K A+I R L +S G+L+YGPPGTGKTL+A+AVA
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E F + GPE+++K G+SE N+R F +A +P ++F DE+DS+AP+R E +
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNG 339
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V RVVSQLL MDG+ +V ++ ATNR + +DPA+ R GR D+ + +G+ D +
Sbjct: 340 EVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTGR 398
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
L +L + KL +DV L+++ + G+D+ S+CS A + IR
Sbjct: 399 LEILSIHTKNMKLGEDVDLETIAAETHGYV-GSDLASLCSEAAMQQIR 445
>sp|Q6GL04|TERA_XENTR Transitional endoplasmic reticulum ATPase OS=Xenopus tropicalis
GN=vcp PE=2 SV=1
Length = 805
Score = 221 bits (563), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 118/232 (50%), Positives = 159/232 (68%), Gaps = 10/232 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQE 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ S++ +LKA +RK ++ DV LD L + SGAD+ IC A AIR
Sbjct: 651 K-SRIAILKANLRKSPVAKDVDLDFLA-KMTNGFSGADLTEICQRACKLAIR 700
Score = 175 bits (443), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KLSDDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 STGRLEILQIHTKNMKLSDDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|P23787|TERA_XENLA Transitional endoplasmic reticulum ATPase OS=Xenopus laevis GN=vcp
PE=1 SV=3
Length = 805
Score = 219 bits (557), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 159/236 (67%), Gaps = 10/236 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
++ S++ +LKA +RK ++ DV +D L + SGAD+ IC A AIR I
Sbjct: 650 EK-SRMAILKANLRKSPVAKDVDVDFLA-KMTNGFSGADLTEICQRACKLAIRESI 703
Score = 175 bits (443), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 108/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KLSDDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 STGRLEILQIHTKNMKLSDDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|P46468|CDAT_PLAF7 Putative cell division cycle ATPase OS=Plasmodium falciparum (isolate
3D7) GN=PF07_0047 PE=3 SV=2
Length = 1229
Score = 218 bits (556), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 102/234 (43%), Positives = 157/234 (67%), Gaps = 10/234 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTF-------RGVNRTSGLKRSGLLLYGPPGTGKTLIAKA 253
+P V+W DIGG++++K ++ T N+ + G+LLYGPPG GKTL+AKA
Sbjct: 928 IPTVTWNDIGGMNEVKEQLKETILYPLEYKHLYNKFNSNYNKGILLYGPPGCGKTLLAKA 987
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A EC+ NF++VKGPELL + G+SE N+R++F KAR+A+PC++FFDE+DSLA R +
Sbjct: 988 IANECKANFISVKGPELLTMWFGESEANVRDLFDKARAASPCIIFFDEIDSLAKERNS-N 1046
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
++ DRV++Q+L E+DG++ + +FI+ ATNR D+LD A+ RPGRLDK +Y+ L D
Sbjct: 1047 TNNDASDRVINQILTEIDGINEKKTIFIIAATNRPDILDKALTRPGRLDKLIYISL-PDL 1105
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ + KA+++ L++DV + + SGADI ++C +A AI+ I
Sbjct: 1106 KSRYSIFKAILKNTPLNEDVDIHDMAKR-TEGFSGADITNLCQSAVNEAIKETI 1158
Score = 149 bits (376), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 86/259 (33%), Positives = 143/259 (55%), Gaps = 27/259 (10%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILS------TFRGVNRT 229
L++ED+++ DD +++ED+GG+ K +I + + +
Sbjct: 512 LKREDYEENNDD----------------ITYEDLGGMKKQLNKIRELIELPLKYPEIFMS 555
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+ G+L++G PGTGKT IAKA+A E + GPE+++K+IG+SE+ +R +F K
Sbjct: 556 IGISAPKGVLMHGIPGTGKTSIAKAIANESNAYCYIINGPEIMSKHIGESEQKLRKIFKK 615
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRV 348
A PC++F DE+DS+A +R + + + RVVSQLL MDG+ + +V +L ATNR
Sbjct: 616 ASEKTPCIIFIDEIDSIANKRSKSNNE--LEKRVVSQLLTLMDGLKKNNNVLVLAATNRP 673
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
+ +DPA+ R GR D+ + + + D + +L +K KL DV+L + + G
Sbjct: 674 NSIDPALRRFGRFDREIEIPV-PDEQGRYEILLTKTKKMKLDPDVNLRKIAKECHGYV-G 731
Query: 409 ADIYSICSNAWTRAIRRII 427
AD+ +C A + I+ I
Sbjct: 732 ADLAQLCFEAAIQCIKEHI 750
>sp|Q9FNP1|PEX1_ARATH Peroxisome biogenesis protein 1 OS=Arabidopsis thaliana GN=PEX1 PE=2
SV=2
Length = 1130
Score = 218 bits (555), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 129/330 (39%), Positives = 191/330 (57%), Gaps = 22/330 (6%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKM-----LKQGINKRDLQKEDFQQIYDDLQSRYSDQL 196
L++ G++ +DL LV +V + L+ I+K +L KEDF + D +
Sbjct: 772 LAAKCEGYDAYDLEILVDRAVHAAIGRHLPLESNISKYNLVKEDFTRAMHDFVPVAMRDI 831
Query: 197 --DAPSVPNVSWEDIGGLSKLK------AEILSTFRGVNRTSGLK-RSGLLLYGPPGTGK 247
A + WED+GG++ +K E+ S F + S L+ RS +LLYGPPG GK
Sbjct: 832 TKSASEGGRLGWEDVGGVTDIKNAIKEMIELPSKFPKIFAKSPLRLRSNVLLYGPPGCGK 891
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T I A A C + F++VKGPELLNKYIG SE+ +R++F KA +AAPC++FFDE DS+AP
Sbjct: 892 THIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCILFFDEFDSIAP 951
Query: 308 RRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYV 367
+RG ++ +GV DRVV+Q L E+DGV VF+ AT+R DLLDPA+LRPGRLD+ L
Sbjct: 952 KRGHDN--TGVTDRVVNQFLTELDGVEVLTGVFVFAATSRPDLLDPALLRPGRLDRLLLC 1009
Query: 368 GLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ +L +L + RK ++DD+ L+ + SGAD+ ++ S+A A+ +
Sbjct: 1010 D-FPSPPERLEILTVLSRKLLMADDIDLEPIA-LMTEGFSGADLQALLSDAQLAAVHEYL 1067
Query: 428 T--SAPQVKSAPVIVTMDDFLGACSLATAP 455
P+ + P+I D L + + T P
Sbjct: 1068 NREDKPETGTTPIIT--DPLLKSIASKTKP 1095
Score = 35.0 bits (79), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 18/19 (94%)
Query: 237 LLLYGPPGTGKTLIAKAVA 255
+L+YGPPG+GKT++A+A A
Sbjct: 596 ILIYGPPGSGKTILARAAA 614
>sp|O05209|VAT_THEAC VCP-like ATPase OS=Thermoplasma acidophilum (strain ATCC 25905 /
DSM 1728 / JCM 9062 / NBRC 15155 / AMRC-C165) GN=vat
PE=1 SV=1
Length = 745
Score = 217 bits (553), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 131/326 (40%), Positives = 188/326 (57%), Gaps = 24/326 (7%)
Query: 119 LLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQK 178
L+I + LG +E ++ T GF DL LVR S N L++ + + DL K
Sbjct: 367 LMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMN-ALRRYLPEIDLDK 425
Query: 179 EDFQQIYDDLQSRYSDQLDA-----PS--------VPNVSWEDIGGLSKLKAEILSTFR- 224
+I + + D +A PS VPNV W+DIGGL +K EI T
Sbjct: 426 PIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVEL 485
Query: 225 -----GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQS 278
V + G++ S G LLYGPPG GKTL+AKAVATE NF+++KGPE+L+K++G+S
Sbjct: 486 PLLKPDVFKRLGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGES 545
Query: 279 EENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD 338
E+ IR +F KA+ AP +VF DE+DS+APRRG SGV +R+V+QLL +DG+
Sbjct: 546 EKAIREIFKKAKQVAPAIVFLDEIDSIAPRRGT-TSDSGVTERIVNQLLTSLDGIEVMNG 604
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++GATNR D++DPA+LR GR DK +Y+ D+ ++L +LK + L+ DV L+ +
Sbjct: 605 VVVIGATNRPDIMDPALLRAGRFDKLIYIP-PPDKEARLSILKVHTKNMPLAPDVDLNDI 663
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIR 424
+ GAD+ ++C A A R
Sbjct: 664 AQRTEGYV-GADLENLCREAGMNAYR 688
Score = 174 bits (442), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 104/269 (38%), Positives = 150/269 (55%), Gaps = 26/269 (9%)
Query: 201 VPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKA 253
V +S+EDIGGLS+ +I L R G++LYGPPGTGKTLIA+A
Sbjct: 184 VSRISYEDIGGLSEQLGKIREMIELPLKHPELFERLGITPPKGVILYGPPGTGKTLIARA 243
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA E NFL++ GPE+++KY GQSE+ +R +F KA AP ++F DE+DS+AP+R E+
Sbjct: 244 VANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPSIIFIDEIDSIAPKR--EE 301
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+QLL MDG+ V ++GATNR+D +DPA+ RPGR D+ + +G+ DR
Sbjct: 302 VQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEIGV-PDR 360
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS-------GADIYSICSNAWTRAIRRI 426
+ +L R L + + F +M+ GAD+ ++ + A+RR
Sbjct: 361 NGRKEILMIHTRNMPLGMS---EEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRY 417
Query: 427 ITSAPQVKSAP------VIVTMDDFLGAC 449
+ K P ++VT DDF A
Sbjct: 418 LPEIDLDKPIPTEILEKMVVTEDDFKNAL 446
>sp|Q54GX5|PEX1_DICDI Peroxisome biogenesis factor 1 OS=Dictyostelium discoideum GN=pex1
PE=3 SV=1
Length = 1227
Score = 217 bits (552), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 113/231 (48%), Positives = 157/231 (67%), Gaps = 15/231 (6%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNR------TSGLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+ W+DIGGL ++A + T + +S L+ RSG+LLYGP G GKTL+A A+A
Sbjct: 863 IKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAG 922
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
EC +NF++VKGPELLNKYIG SE+ +R+VF +A SA PCV+FFDE DS+APRRG ++ S
Sbjct: 923 ECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDN--S 980
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--YEDRI 374
GV DRVV+Q L ++DGV V++L AT+R DL+DPA+LRPGRLDKSLY + + +R+
Sbjct: 981 GVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFNERL 1040
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
L LK+ K LS +SL+ L + +GAD+ ++ NA ++I
Sbjct: 1041 DILTCLKS---KMNLSPSISLEQLSTN-TQYYTGADLRALMYNAQLKSIHE 1087
>sp|P54609|CD48A_ARATH Cell division control protein 48 homolog A OS=Arabidopsis thaliana
GN=CDC48A PE=1 SV=1
Length = 809
Score = 216 bits (550), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 156/236 (66%), Gaps = 11/236 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSW DIGGL +K E+ T + V ++ G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR--GQ 311
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +R G
Sbjct: 534 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGS 593
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++QLL EMDG++ + VFI+GATNR D++D A+LRPGRLD+ +Y+ L
Sbjct: 594 GGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL-P 652
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
D S+L + KA +RK ++ DV + +L + SGADI IC A AIR I
Sbjct: 653 DEDSRLNIFKAALRKSPIAKDVDIGALA-KYTQGFSGADITEICQRACKYAIRENI 707
Score = 168 bits (426), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/238 (39%), Positives = 143/238 (60%), Gaps = 17/238 (7%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTL 249
D + +V ++D+GG+ K A+I R L +S G+LLYGPPG+GKTL
Sbjct: 197 DEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E + V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 317 --EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + H + GAD+ ++C+ A + IR
Sbjct: 375 -PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGY----VGADLAALCTEAALQCIR 427
>sp|P46462|TERA_RAT Transitional endoplasmic reticulum ATPase OS=Rattus norvegicus
GN=Vcp PE=1 SV=3
Length = 806
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 10/227 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
++ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A
Sbjct: 650 EK-SRVAILKANLRKSPVAKDVDLEFLA-KMTNGFSGADLTEICQRA 694
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|Q3ZBT1|TERA_BOVIN Transitional endoplasmic reticulum ATPase OS=Bos taurus GN=VCP PE=2
SV=1
Length = 806
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 10/227 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
++ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A
Sbjct: 650 EK-SRVAILKANLRKSPVAKDVDLEFLA-KMTNGFSGADLTEICQRA 694
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|Q01853|TERA_MOUSE Transitional endoplasmic reticulum ATPase OS=Mus musculus GN=Vcp
PE=1 SV=4
Length = 806
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 10/227 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
++ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A
Sbjct: 650 EK-SRVAILKANLRKSPVAKDVDLEFLA-KMTNGFSGADLTEICQRA 694
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|P55072|TERA_HUMAN Transitional endoplasmic reticulum ATPase OS=Homo sapiens GN=VCP
PE=1 SV=4
Length = 806
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 10/227 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
++ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A
Sbjct: 650 EK-SRVAILKANLRKSPVAKDVDLEFLA-KMTNGFSGADLTEICQRA 694
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|P03974|TERA_PIG Transitional endoplasmic reticulum ATPase OS=Sus scrofa GN=VCP PE=1
SV=5
Length = 806
Score = 216 bits (549), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 114/227 (50%), Positives = 156/227 (68%), Gaps = 10/227 (4%)
Query: 200 SVPNVSWEDIGGLSKLKAEI--LSTFRGVNRTSGLK-----RSGLLLYGPPGTGKTLIAK 252
VP V+WEDIGGL +K E+ L + + LK G+L YGPPG GKTL+AK
Sbjct: 470 EVPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 529
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQ 311
A+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A R G
Sbjct: 530 AIANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGN 589
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +
Sbjct: 590 IGDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPD 649
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
++ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A
Sbjct: 650 EK-SRVAILKANLRKSPVAKDVDLEFLA-KMTNGFSGADLTEICQRA 694
Score = 174 bits (440), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 107/277 (38%), Positives = 158/277 (57%), Gaps = 19/277 (6%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I R L ++ G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>sp|O15381|NVL_HUMAN Nuclear valosin-containing protein-like OS=Homo sapiens GN=NVL PE=1
SV=1
Length = 856
Score = 214 bits (545), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 113/236 (47%), Positives = 158/236 (66%), Gaps = 12/236 (5%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGL---KRSGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R ++ L +G+LL GPPG GKTL+AK
Sbjct: 574 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 633
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 634 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 691
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--Y 370
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 692 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGLPPP 751
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
DR++ L + K L DV+L+++ +GAD+ ++ A A+R+
Sbjct: 752 ADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
Score = 151 bits (381), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 92/278 (33%), Positives = 151/278 (54%), Gaps = 20/278 (7%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGLSKLKAE 218
K K+ +G ++ KED Q++ ++++ + A + NV +ED+GG E
Sbjct: 220 KGKLKNKGSKRK---KEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKE 276
Query: 219 ILSTFRGV------NRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
+ + + + G+LL+GPPG GKTL+A A+A E + L V PE+++
Sbjct: 277 VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 336
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD- 331
G+SE+ +R +F +A S APC++F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 337 GVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 394
Query: 332 --GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 395 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 453
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
L H P GAD+ ++C A A+ R++
Sbjct: 454 PQAFDFCHLAHLTPG-FVGADLMALCREAAMCAVNRVL 490
>sp|P24004|PEX1_YEAST Peroxisomal ATPase PEX1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PEX1 PE=1 SV=2
Length = 1043
Score = 213 bits (543), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/251 (44%), Positives = 161/251 (64%), Gaps = 20/251 (7%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
N+ W DIG L+ K +L T + + RSG+LLYG PG GKTL+A AVA
Sbjct: 693 NIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVA 752
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+C +NF++VKGPE+LNK+IG SE+NIR +F +A+S PC++FFDE DS+AP+RG + S
Sbjct: 753 QQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHD--S 810
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+GV DRVV+QLL +MDG V+IL AT+R DL+D A+LRPGRLDKS+ + +
Sbjct: 811 TGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTES-E 869
Query: 376 QLGVLKAVV---------RKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L +L+A+V +KF L + L L+ + SGAD+ +C NA+ +++ R
Sbjct: 870 RLDILQAIVNSKDKDTGQKKFALEKNADL-KLIAEKTAGFSGADLQGLCYNAYLKSVHRW 928
Query: 427 ITSAPQVKSAP 437
+++A Q + P
Sbjct: 929 LSAADQSEVVP 939
>sp|Q54SY2|NVL_DICDI Putative ribosome biogenesis ATPase nvl OS=Dictyostelium discoideum
GN=nvl PE=3 SV=1
Length = 867
Score = 213 bits (542), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 119/266 (44%), Positives = 166/266 (62%), Gaps = 25/266 (9%)
Query: 200 SVPNVSWEDIGGLSKLKAEIL-STFRGVNRTSGLKR------SGLLLYGPPGTGKTLIAK 252
++PNV+W+D+G LS ++ E+ S R + K +G+L+YGPPG GKTL+AK
Sbjct: 559 TIPNVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAK 618
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A+A+EC+ NF++VKGPELLNKY+G+SE +R VF +A +++PCV+FFDE D+LAP+RG
Sbjct: 619 AIASECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGG 678
Query: 313 DQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL-- 369
D +RVV+QLL EMDG+ +VFI+ ATNR D++D A+ RPGRLDK +YV L
Sbjct: 679 DGGGNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPS 738
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSL-----DSLVHHFPSQMSGADIYSICSNAWTRAIR 424
E+R +LK + K + DV L D H F SGAD+ + A AI
Sbjct: 739 PEERCE---ILKTLTHKIPIHQDVDLIKVGTDLRCHSF----SGADLSLLVKEAANHAIS 791
Query: 425 RIITSAPQVKSAPVIVTMDDFLGACS 450
R + + P VTM+DF+ A S
Sbjct: 792 RGFDNN---STEPDTVTMEDFIFALS 814
Score = 114 bits (285), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 119/244 (48%), Gaps = 54/244 (22%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPC 295
G+LL+GP G GKTL+AKA+A E ++ A+ E+ + G+SE +R +F A + APC
Sbjct: 252 GILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSGVSGESEARVRTLFSNAIAQAPC 311
Query: 296 VVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVH--------------------T 335
++F DE+D++AP+R E S + R+VSQLL MD ++
Sbjct: 312 IIFIDEIDAIAPKR--ESASKDMERRIVSQLLTCMDSLNYLSSNNSTNEPNEQTEQQQQQ 369
Query: 336 SQDVF------------------------------ILGATNRVDLLDPAILRPGRLDKSL 365
QD+ ++GATNR + LD A+ GR DK +
Sbjct: 370 QQDIIEVDSQATTTTTASNNNNKQQKNDFKKGHVIVIGATNRPESLDTALRIGGRFDKEI 429
Query: 366 YVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+G+ D+ ++ +LK + K +L ++ + + P + GADI + A T ++ R
Sbjct: 430 CLGI-PDQTARCKILKVITSKMRLENNFDYEEIATLTPGYV-GADINLLVKEAATNSVNR 487
Query: 426 IITS 429
I TS
Sbjct: 488 IFTS 491
>sp|Q07590|SAV_SULAC Protein SAV OS=Sulfolobus acidocaldarius (strain ATCC 33909 / DSM
639 / JCM 8929 / NBRC 15157 / NCIMB 11770) GN=sav PE=3
SV=2
Length = 780
Score = 212 bits (539), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 126/308 (40%), Positives = 187/308 (60%), Gaps = 27/308 (8%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDL---QKEDFQQIYDDLQSRYSDQLDA 198
L+ +T G+ DL L + + L++ ++++ L Q +I +L+ +D L+A
Sbjct: 407 LAEMTYGYTGADLAALAKEAAIY-ALRRFVDEKKLNLDQPTIPAEIIKELKVSMNDFLNA 465
Query: 199 -----PS--------VPNVSWEDIGGLSKLKAEILST------FRGVNRTSGLKR-SGLL 238
PS VP V+W DIGGL +K ++ F + SG+ G+L
Sbjct: 466 LKSIQPSLLREVYVEVPKVNWNDIGGLDNVKQQLREAVEWPLRFPELFTKSGVTPPKGIL 525
Query: 239 LYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVF 298
L+GPPGTGKT++AKAVATE NF+AV+GPE+L+K++G+SE+ IR +F KAR AAP V+F
Sbjct: 526 LFGPPGTGKTMLAKAVATESGANFIAVRGPEILSKWVGESEKAIREIFRKARQAAPTVIF 585
Query: 299 FDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRP 358
FDE+DS+AP RG SGV +R+V+QLLAEMDG+ V I+ ATNR D+LDPA+LRP
Sbjct: 586 FDEIDSIAPIRGL-STDSGVTERIVNQLLAEMDGIVPLNKVVIIAATNRPDILDPALLRP 644
Query: 359 GRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
GR D+ +YV D+ ++ +LK + L++DVSL+ + +GAD+ ++ A
Sbjct: 645 GRFDRLIYVP-PPDKTARFEILKVHTKNVPLAEDVSLEDIAEKA-EGYTGADLEALVREA 702
Query: 419 WTRAIRRI 426
A+R I
Sbjct: 703 TINAMRSI 710
Score = 182 bits (461), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/263 (39%), Positives = 147/263 (55%), Gaps = 20/263 (7%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAV 254
P VSWEDIG L + K +I R L G+LLYGPPGTGKTL+A+A+
Sbjct: 207 PKVSWEDIGDLEEAKQKIREIVEWPMRHPELFQRLGIDPPKGILLYGPPGTGKTLLARAL 266
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A E F+ V GPE+++K+ G+SE+ IR +F +A AP ++F DE+D++AP+R ED
Sbjct: 267 ANEIGAYFITVNGPEIMSKFYGESEQRIREIFKEAEENAPSIIFIDEIDAIAPKR--EDV 324
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ V RVV+QLL MDG+ V ++GATNR D +DPA+ RPGR D+ + + D
Sbjct: 325 TGEVEKRVVAQLLTLMDGIKGRGRVIVIGATNRPDAIDPALRRPGRFDREIEI-RPPDTK 383
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
+ +L+ R ++DDV LD L +GAD+ ++ A A+RR +
Sbjct: 384 GRKDILQVHTRNMPITDDVDLDKLA-EMTYGYTGADLAALAKEAAIYALRRFVDEKKLNL 442
Query: 435 SAPVI---------VTMDDFLGA 448
P I V+M+DFL A
Sbjct: 443 DQPTIPAEIIKELKVSMNDFLNA 465
>sp|Q5BL07|PEX1_MOUSE Peroxisome biogenesis factor 1 OS=Mus musculus GN=Pex1 PE=1 SV=2
Length = 1284
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/236 (45%), Positives = 163/236 (69%), Gaps = 12/236 (5%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
++ W+ IGGL +++ ++ T + + L +R+G+LLYGPPGTGKTL+A VA
Sbjct: 837 DLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVVA 896
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
E MNF+++KGPELL+KYIG SE+ +R+VF++A++A PC++FFDE +S+APRRG ++
Sbjct: 897 RESGMNFISIKGPELLSKYIGASEQAVRDVFIRAQAAKPCILFFDEFESIAPRRGHDN-- 954
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+GV DRVV+QLL ++DGV Q V++L AT+R DL+DPA+LRPGRLDK +Y D++S
Sbjct: 955 TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCP-PPDQVS 1013
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR-RIITSA 430
+L +L + + L+DDV L V +GAD+ ++ NA A++ R++ S
Sbjct: 1014 RLEILTVLSKSLALADDVDLQH-VASVTDSFTGADLKALLYNAQLEALQGRLLPSG 1068
Score = 37.4 bits (85), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 20/136 (14%)
Query: 210 GGLSKLKAEILSTF------RGVNR-----TSGLKRSGLLLYGPPGTGKTLIAKAVATEC 258
GG+S L A + R ++R +GL+ LL+ G G+GK+ AKA+ E
Sbjct: 558 GGVSALGASAMEHITHSLLGRPLSRQLMALVAGLRNGALLITGGKGSGKSTFAKAICKEA 617
Query: 259 RMNFLA----VKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA--PRRGQE 312
+ A V L K + ++ + F +A P V+ D+LD +A P ++
Sbjct: 618 QDTLDARVETVDCKALRGKRLESIQKALEVAFSEAAWRQPSVILLDDLDLIAGLPSVPEQ 677
Query: 313 DQSSGVMDRVVSQLLA 328
+ S + V SQ LA
Sbjct: 678 EHSP---EAVQSQRLA 690
>sp|P46463|PEX1_PICPA Peroxisome biosynthesis protein PAS1 OS=Komagataella pastoris GN=PEX1
PE=3 SV=1
Length = 1157
Score = 211 bits (538), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 107/235 (45%), Positives = 160/235 (68%), Gaps = 15/235 (6%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
+V W+DIGGL K+ +L T + + + RSG+LLYG PG GKTL+A AVA
Sbjct: 795 DVRWDDIGGLRDAKSILLETLEWPTKYAPIFSSCPLRLRSGILLYGYPGCGKTLLASAVA 854
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+C +NF+++KGPE+LNKYIG SE+++R +F +A++A PC++FFDE DS+AP+RG + S
Sbjct: 855 AQCGLNFISIKGPEILNKYIGPSEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHD--S 912
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--YEDR 373
+GV DRVV+Q+L +MDG V++L AT+R DL+D A+LRPGRLDKS+ + ++DR
Sbjct: 913 TGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPDFDDR 972
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIIT 428
L +L++V R +S V+L S+ S SGAD+ ++ NA+ +A+ +T
Sbjct: 973 ---LDILQSVTRNMNVSKSVNLSSVAGEC-SGFSGADLQALAYNAYLKAVHEKLT 1023
Score = 42.4 bits (98), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 69/136 (50%), Gaps = 16/136 (11%)
Query: 230 SGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGP--ELLN--KYIGQSEENIR-- 283
S + G LL+G G+GK+L+ VA + KG +LLN K + +S N+R
Sbjct: 512 SKIASGGSLLFGTSGSGKSLVISQVA-----QIVTNKGHFVKLLNCDKIMSESYNNLRGI 566
Query: 284 --NVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQ-LLAEMDGVHTSQDVF 340
++F + AP ++ ++LDSL P +++ S R +S+ ++++ ++D+
Sbjct: 567 FEDIFSEVSWKAPSLLILEDLDSLIP--AEQEHSDSSQSRQLSEYFISKLSAQTINRDIT 624
Query: 341 ILGATNRVDLLDPAIL 356
IL ++ + L+ I
Sbjct: 625 ILASSKSKESLNSLIF 640
>sp|Q9P3A7|CDC48_SCHPO Cell division cycle protein 48 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cdc48 PE=1 SV=2
Length = 815
Score = 211 bits (537), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/234 (48%), Positives = 157/234 (67%), Gaps = 15/234 (6%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-------GVNRTSGLKRSGLLLYGPPGTGKTLIAKA 253
VPNV WEDIGGL ++K E+ T + R G+L +GPPGTGKTL+AKA
Sbjct: 491 VPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKA 550
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A EC NF++VKGPELL+ + G+SE N+R++F KAR+AAPCVVF DELDS+A RG
Sbjct: 551 IANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASA 610
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
SG DRVV+QLL EMDGV++ ++VF++GATNR D +DPA++RPGRLD+ +YV L D
Sbjct: 611 GDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPL-PDE 669
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSL---VHHFPSQMSGADIYSICSNAWTRAIR 424
++ +L+ +R +++DV L ++ H F SGAD+ + A AI+
Sbjct: 670 EARFSILQTQLRHTPVAEDVDLRAVAKATHGF----SGADLEFVVQRAVKLAIK 719
Score = 166 bits (419), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/333 (33%), Positives = 171/333 (51%), Gaps = 23/333 (6%)
Query: 106 TINVLPLTEPERRLLIQYQLDCLGGDYG--FDASLVEYLSSVTSGFERHDLTCLVRLSVK 163
TIN P + R+ + D + G G FD L Y + DL V+
Sbjct: 121 TINPCPDIKYAERISVLPLADTVEGLTGSLFDVYLKPYFVEAYRPIRKGDL-----FVVR 175
Query: 164 NKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQL-----DAPSVPNVSWEDIGGLSKLKAE 218
M + D+ ++F + D + + + S+ V ++DIGG + A+
Sbjct: 176 GSMRQVEFKVVDVAPDEFGIVSQDTIIHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQ 235
Query: 219 ILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELL 271
I R L +S G+L+YGPPGTGKTL+A+AVA E F + GPE++
Sbjct: 236 IRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 295
Query: 272 NKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD 331
+K G+SE N+R F +A +P ++F DE+DS+AP+R E + V RVVSQLL MD
Sbjct: 296 SKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVERRVVSQLLTLMD 353
Query: 332 GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSD 391
G+ +V ++ ATNR + +DPA+ R GR D+ + VG+ D +L +L+ + KL+D
Sbjct: 354 GMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGI-PDPTGRLEILRIHTKNMKLAD 412
Query: 392 DVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
DV L+ + + G+D+ S+CS A + IR
Sbjct: 413 DVDLEQIAAETHGYV-GSDLASLCSEAAMQQIR 444
>sp|P54811|TERA1_CAEEL Transitional endoplasmic reticulum ATPase homolog 1
OS=Caenorhabditis elegans GN=cdc-48.1 PE=1 SV=1
Length = 809
Score = 210 bits (535), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 117/236 (49%), Positives = 157/236 (66%), Gaps = 11/236 (4%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA
Sbjct: 477 TPNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKA 536
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 537 IANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGA 596
Query: 314 QSSGVM--DRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L
Sbjct: 597 GGDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-P 655
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
D S+ +LKA +RK LS D+ L L + SGAD+ IC A AIR I
Sbjct: 656 DEASRHQILKASLRKTPLSKDLDLTFLAKNTVG-FSGADLTEICQRACKLAIRESI 710
Score = 157 bits (396), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 89/235 (37%), Positives = 139/235 (59%), Gaps = 17/235 (7%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
S+ ++ ++D+GG+ K A+I R L ++ G+LL+GPPGTGKTLIA+
Sbjct: 203 SMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR 262
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F + P ++F DE+D++AP+R E
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--E 320
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ V R+VSQLL MDGV ++ ++ ATNR + +D A+ R GR D+ + +G+ D
Sbjct: 321 KTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGI-PD 379
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLV---HHFPSQMSGADIYSICSNAWTRAIR 424
+ +L +L+ + KL+DDV L+ + H F GAD+ S+CS A + IR
Sbjct: 380 AVGRLEILRIHTKNMKLADDVDLEQIANECHGF----VGADLASLCSEAALQQIR 430
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 173,502,317
Number of Sequences: 539616
Number of extensions: 7264923
Number of successful extensions: 28731
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1486
Number of HSP's successfully gapped in prelim test: 1018
Number of HSP's that attempted gapping in prelim test: 25578
Number of HSP's gapped (non-prelim): 2820
length of query: 478
length of database: 191,569,459
effective HSP length: 121
effective length of query: 357
effective length of database: 126,275,923
effective search space: 45080504511
effective search space used: 45080504511
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 63 (28.9 bits)