Your job contains 1 sequence.
>psy450
MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVK
YVYFKLCSFDSVNVKSNETKDQQCKQQHKKKLVLIRKQIQKLFLKTINVLPLTEPERRLL
IQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKED
FQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRSGLLLY
GPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFD
ELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGR
LDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWT
RAIRRIITSAPQVKSAPVIVTMDDFLGACSLATAPDKFSQSVAPDNYSLSVAPELLVA
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy450
(478 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|E2RDF7 - symbol:PEX6 "Uncharacterized protein" ... 841 1.3e-86 2
UNIPROTKB|E1B8F6 - symbol:PEX6 "Uncharacterized protein" ... 840 1.7e-86 2
MGI|MGI:2385054 - symbol:Pex6 "peroxisomal biogenesis fac... 832 9.2e-86 2
RGD|621637 - symbol:Pex6 "peroxisomal biogenesis factor 6... 829 2.4e-85 2
UNIPROTKB|P54777 - symbol:Pex6 "Peroxisome assembly facto... 829 2.4e-85 2
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 780 1.7e-84 3
UNIPROTKB|F1NYD5 - symbol:PEX6 "Uncharacterized protein" ... 844 2.7e-84 1
UNIPROTKB|A5GFQ7 - symbol:PEX6 "Peroxisomal biogenesis fa... 832 5.0e-83 1
FB|FBgn0033564 - symbol:Pex6 "Peroxin 6" species:7227 "Dr... 768 8.3e-83 3
UNIPROTKB|Q13608 - symbol:PEX6 "Peroxisome assembly facto... 829 1.0e-82 1
UNIPROTKB|Q60HE0 - symbol:PEX6 "Peroxin Pex6p" species:95... 819 1.2e-81 1
ZFIN|ZDB-GENE-081104-252 - symbol:pex6 "peroxisomal bioge... 807 2.2e-80 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 753 2.1e-76 2
WB|WBGene00004195 - symbol:prx-6 species:6239 "Caenorhabd... 689 6.8e-71 2
ASPGD|ASPL0000034610 - symbol:pexF species:162425 "Emeric... 727 9.9e-71 1
SGD|S000005273 - symbol:PEX6 "AAA-peroxin" species:4932 "... 704 4.2e-69 1
CGD|CAL0005974 - symbol:PEX6 species:5476 "Candida albica... 693 5.8e-69 2
UNIPROTKB|Q59ZE6 - symbol:PEX6 "Likely peroxisomal biogen... 693 5.8e-69 2
UNIPROTKB|G4NBI6 - symbol:MGG_00529 "Peroxisomal biogenes... 691 5.8e-67 1
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 632 2.1e-61 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 564 8.0e-57 2
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 578 4.2e-56 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 575 8.6e-56 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 575 8.6e-56 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 575 8.6e-56 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 573 1.4e-55 1
TAIR|locus:2831844 - symbol:AtCDC48C "cell division cycle... 573 1.4e-55 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 571 2.3e-55 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 571 2.3e-55 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 571 2.3e-55 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 571 2.3e-55 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 571 2.3e-55 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 571 2.3e-55 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 571 3.2e-55 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 569 4.8e-55 1
UNIPROTKB|E9PE75 - symbol:PEX1 "Peroxisome biogenesis fac... 574 6.0e-55 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 566 9.5e-55 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 564 1.5e-54 1
UNIPROTKB|O43933 - symbol:PEX1 "Peroxisome biogenesis fac... 574 1.7e-54 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 561 2.6e-54 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 562 3.0e-54 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 562 3.0e-54 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 562 3.6e-54 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 560 4.8e-54 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 555 1.8e-53 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 554 2.5e-53 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 554 2.5e-53 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 551 6.9e-53 1
TAIR|locus:2159557 - symbol:PEX1 "peroxisome 1" species:3... 556 1.0e-52 1
UNIPROTKB|E2RLT2 - symbol:PEX1 "Uncharacterized protein" ... 545 1.0e-52 2
MGI|MGI:1914709 - symbol:Nvl "nuclear VCP-like" species:1... 550 1.3e-52 1
UNIPROTKB|H0Y8B6 - symbol:NVL "Nuclear valosin-containing... 524 1.4e-52 2
UNIPROTKB|E7ERY0 - symbol:NVL "Nuclear valosin-containing... 524 1.4e-52 2
UNIPROTKB|E2RCK9 - symbol:PEX1 "Uncharacterized protein" ... 545 1.7e-52 2
SGD|S000001680 - symbol:PEX1 "AAA-peroxin" species:4932 "... 520 1.8e-52 3
GENEDB_PFALCIPARUM|PF07_0047 - symbol:PF07_0047 "cell div... 538 3.1e-52 2
UNIPROTKB|P46468 - symbol:PF07_0047 "Putative cell divisi... 538 3.1e-52 2
MGI|MGI:1918632 - symbol:Pex1 "peroxisomal biogenesis fac... 552 3.8e-52 1
UNIPROTKB|E1BY08 - symbol:PEX1 "Uncharacterized protein" ... 552 3.8e-52 1
RGD|1311270 - symbol:Nvl "nuclear VCP-like" species:10116... 545 4.5e-52 1
TAIR|locus:2103555 - symbol:CIP111 "Cam interacting prote... 515 6.5e-52 3
DICTYBASE|DDB_G0289867 - symbol:pex1 "peroxisomal biogene... 537 1.0e-51 2
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 539 1.4e-51 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 538 2.1e-51 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 538 2.1e-51 1
UNIPROTKB|O15381 - symbol:NVL "Nuclear valosin-containing... 524 2.6e-51 2
UNIPROTKB|E1BPU3 - symbol:PEX1 "Uncharacterized protein" ... 543 3.5e-51 1
UNIPROTKB|E1BT72 - symbol:NVL "Uncharacterized protein" s... 537 3.6e-51 1
DICTYBASE|DDB_G0282181 - symbol:nvl "valosin-containing p... 537 3.8e-51 1
UNIPROTKB|F1MIM8 - symbol:NVL "Uncharacterized protein" s... 518 9.7e-51 2
CGD|CAL0002247 - symbol:PEX1 species:5476 "Candida albica... 526 1.1e-50 2
UNIPROTKB|Q5AH73 - symbol:PEX1 "Likely peroxisomal biogen... 526 1.1e-50 2
SGD|S000003957 - symbol:RIX7 "Putative ATPase of the AAA ... 517 1.6e-50 2
ZFIN|ZDB-GENE-070530-1 - symbol:pex1 "peroxisome biogenes... 536 1.8e-50 1
RGD|1559939 - symbol:Pex1 "peroxisomal biogenesis factor ... 536 2.0e-50 1
UNIPROTKB|E2QY79 - symbol:NVL "Uncharacterized protein" s... 530 2.0e-50 1
UNIPROTKB|J9P5D7 - symbol:NVL "Uncharacterized protein" s... 530 2.1e-50 1
WB|WBGene00010562 - symbol:cdc-48.3 species:6239 "Caenorh... 524 2.2e-50 1
ZFIN|ZDB-GENE-040426-2871 - symbol:nvl "nuclear VCP-like"... 524 5.6e-50 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 523 1.1e-49 1
MGI|MGI:1927170 - symbol:Spata5 "spermatogenesis associat... 523 1.5e-49 1
POMBASE|SPBC16E9.10c - symbol:SPBC16E9.10c "AAA family AT... 519 1.7e-49 1
UNIPROTKB|E2RC37 - symbol:SPATA5 "Uncharacterized protein... 520 3.3e-49 1
UNIPROTKB|I3LPI5 - symbol:PEX1 "Uncharacterized protein" ... 523 4.8e-49 1
UNIPROTKB|Q8NB90 - symbol:SPATA5 "Spermatogenesis-associa... 516 8.9e-49 1
FB|FBgn0016983 - symbol:smid "smallminded" species:7227 "... 515 1.4e-48 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 510 2.7e-48 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 510 2.7e-48 1
DICTYBASE|DDB_G0278435 - symbol:DDB_G0278435 "AAA ATPase ... 457 4.3e-48 3
SGD|S000004389 - symbol:AFG2 "ATPase of the CDC48/PAS1/SE... 505 6.4e-48 1
CGD|CAL0000102 - symbol:RIX7 species:5476 "Candida albica... 505 9.6e-48 1
UNIPROTKB|Q5AGG2 - symbol:RIX7 "Putative uncharacterized ... 505 9.6e-48 1
FB|FBgn0032450 - symbol:CG5776 species:7227 "Drosophila m... 504 9.9e-48 1
GENEDB_PFALCIPARUM|PF14_0126 - symbol:PF14_0126 "hypothet... 433 2.3e-47 4
UNIPROTKB|Q8ILW7 - symbol:PF14_0126 "AAA family ATPase, p... 433 2.3e-47 4
POMBASE|SPBC56F2.07c - symbol:SPBC56F2.07c "ribosome biog... 501 2.3e-47 1
TAIR|locus:2084163 - symbol:CDC48C "cell division cycle 4... 485 5.3e-47 2
ASPGD|ASPL0000002697 - symbol:pexA species:162425 "Emeric... 501 9.8e-47 1
ASPGD|ASPL0000062283 - symbol:AN1366 species:162425 "Emer... 490 1.7e-46 1
WB|WBGene00003119 - symbol:mac-1 species:6239 "Caenorhabd... 491 3.0e-46 1
WARNING: Descriptions of 624 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|E2RDF7 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AAEX03008332 RefSeq:XP_538926.2
Ensembl:ENSCAFT00000002738 GeneID:481805 KEGG:cfa:481805
NextBio:20856540 Uniprot:E2RDF7
Length = 980
Score = 841 (301.1 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 168/307 (54%), Positives = 224/307 (72%)
Query: 162 VKNKMLKQGINKRD----------LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGG 211
+KN L G+++ D L EDF Q + LQ+ +S + AP +P+VSW D+GG
Sbjct: 650 IKNSGLAGGLSEEDEGELCAAGFPLLAEDFGQALEQLQTAHSQAIGAPKIPSVSWHDVGG 709
Query: 212 LSKLKAEILSTFR-GVNRTS----GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVK 266
L ++K EIL T + + GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VK
Sbjct: 710 LQEVKKEILETIQLPLEHPELLSLGLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVK 769
Query: 267 GPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQL 326
GPEL+N Y+GQSEEN+R VF +AR+AAPC++FFDELDSLAP RG+ S GVMDRVVSQL
Sbjct: 770 GPELINMYVGQSEENVREVFARARAAAPCIIFFDELDSLAPSRGRNGDSGGVMDRVVSQL 829
Query: 327 LAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRK 386
LAE+DG+H++QDVF++GATNR DLLDPA+LRPGR DK ++VG+ EDR SQL VL A+ RK
Sbjct: 830 LAELDGLHSTQDVFVIGATNRPDLLDPALLRPGRFDKLVFVGVSEDRASQLRVLSAITRK 889
Query: 387 FKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ---VKSAPVIVTMD 443
FKL VSL +++ P Q++GAD+YS+CS+A T A++R + + S+ +++TMD
Sbjct: 890 FKLEPSVSLVNVLDRCPPQLTGADLYSLCSDAMTTALKRRVRDLEEGLEPGSSTLLLTMD 949
Query: 444 DFLGACS 450
D L A +
Sbjct: 950 DLLQAAA 956
Score = 145 (56.1 bits), Expect = 4.0e-06, Sum P(2) = 4.0e-06
Identities = 55/229 (24%), Positives = 100/229 (43%)
Query: 206 WEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKAVATECRM 260
W + GL L E+ + + + G +G +LL GPPG+GKT A + +
Sbjct: 430 WNSLSPPGLETLVTELCAALKPRLQPGGALLTGTSSVLLRGPPGSGKTTAVTAACSRLGL 489
Query: 261 NFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMD 320
+ L V L G E+ ++ F +AR P V+ +D L R + + V+
Sbjct: 490 HLLKVPCSSLCADSSGAVEKKLQATFSRARRCRPVVLLLTAVDLLGRNRDGLGEDARVV- 548
Query: 321 RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVL 380
+ LL + D + + + ++ T++ L PA ++ L V + + +L VL
Sbjct: 549 ATLCHLLQDEDPLTSCPPLMVVATTSQAQDL-PADVQTA-FPHELEVPVLSEG-QRLSVL 605
Query: 381 KAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+A+ L +V+L L + G D+Y++ +++ A RI S
Sbjct: 606 QALTAHLPLGQEVNLTQLARRCAGFVVG-DLYALLTHSSRVACTRIKNS 653
Score = 44 (20.5 bits), Expect = 1.3e-86, Sum P(2) = 1.3e-86
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 1 MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIV 36
+E + S H N + H+L +F TPR D++
Sbjct: 323 IEIVSSPHYSTNGNY-DHVLYRHFQTPRAVQEGDVL 357
>UNIPROTKB|E1B8F6 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050821 "protein stabilization" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0016561 "protein import
into peroxisome matrix, translocation" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0042623 GO:GO:0016561 KO:K13339 CTD:5190 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:DAAA02055080 IPI:IPI00717630
RefSeq:NP_001179876.1 UniGene:Bt.44757 PRIDE:E1B8F6
Ensembl:ENSBTAT00000007275 GeneID:534944 KEGG:bta:534944
NextBio:20876581 Uniprot:E1B8F6
Length = 980
Score = 840 (300.8 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
Identities = 162/283 (57%), Positives = 215/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q + LQ+ +S + AP +P+VSW D+GGL ++K EIL T + +
Sbjct: 674 LLAEDFGQALEQLQAAHSQAIGAPRIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 733
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 734 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 793
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 794 AAAPCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 853
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG+ EDR SQL VL A+ RKF+L VSL ++ H P Q++GAD
Sbjct: 854 LDPALLRPGRFDKLVFVGVNEDRASQLRVLSAITRKFRLEPSVSLVDVLDHCPPQLTGAD 913
Query: 411 IYSICSNAWTRAIRRIITSAPQ---VKSAPVIVTMDDFLGACS 450
+YS+CS+A T A++R + + S+ +++TM+D L A +
Sbjct: 914 LYSLCSDAMTAALKRRVRDLEEGLEPGSSALLLTMEDLLQAAA 956
Score = 150 (57.9 bits), Expect = 1.2e-06, Sum P(2) = 1.2e-06
Identities = 57/236 (24%), Positives = 102/236 (43%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W + GL L E+ + + + G +G +LL GPPG+GKT A
Sbjct: 423 PSGDSTPWSSLSPPGLEALVTELCTALKPRLQPGGALLTGTGSVLLRGPPGSGKTTAVAA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L G E ++ F +AR P V+ +D L R
Sbjct: 483 ACSRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRDRDGLG 542
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V+ + LL + D + + + ++ T+R L PA ++ L V + +
Sbjct: 543 EDARVV-ATLRHLLLDEDPLASCPPLMVVATTSRAQDL-PADVQTA-FPHELEVPVLAEA 599
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+L VL+A+ L +V+L L + G D++++ +++ A RI S
Sbjct: 600 -QRLSVLRALTAHLPLGQEVNLAQLARRCAGFVVG-DLFALLTHSSRAACTRIKNS 653
Score = 44 (20.5 bits), Expect = 1.7e-86, Sum P(2) = 1.7e-86
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 1 MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIV 36
+E + S H N + H+L +F TPR D++
Sbjct: 323 IEIVSSPHYSTNGNY-DHVLYRHFQTPRAVQEGDVL 357
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 832 (297.9 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 162/283 (57%), Positives = 214/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q D LQ+ +S + AP +P+VSW D+GGL +K EIL T + +
Sbjct: 675 LLAEDFGQALDQLQTAHSQAVGAPRIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSL 734
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 735 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 794
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 795 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 854
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 855 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLANVLDCCPPQLTGAD 914
Query: 411 IYSICSNAWTRAIRRIITSAPQ---VKSAPVIVTMDDFLGACS 450
+YS+CS+A A++R + + ++S+ +++TM+D L A +
Sbjct: 915 LYSLCSDAMMTALKRRVRDLEEGLELRSSALLLTMEDLLQAAA 957
Score = 143 (55.4 bits), Expect = 5.3e-06, Sum P(2) = 5.3e-06
Identities = 56/236 (23%), Positives = 99/236 (41%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W+ + GL L E+ + + + G +G +LL GPPG+GKT A
Sbjct: 424 PSGRSPPWDSLSPPGLEALVNELCAILKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTA 483
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L E ++ F +AR P V+ +D L R
Sbjct: 484 ACSRLGLHLLKVPCSSLCADSSRAVETKLQATFSRARRCRPAVLLLTAVDLLGRDRDGLG 543
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V + LL + D + + ++ T+RV L P ++ L V + +
Sbjct: 544 EDARVA-ATLRHLLLDEDALSRCPPLMVVATTSRVQDL-PTDVQTA-FPHELEVPVLSEA 600
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+L +L+A+ L +V+L L + G D+Y++ ++ A RI S
Sbjct: 601 -QRLSILQALTAHLPLGQEVNLPQLARRCAGFVVG-DLYALLTHTCRAACTRIRAS 654
Score = 45 (20.9 bits), Expect = 9.2e-86, Sum P(2) = 9.2e-86
Identities = 11/39 (28%), Positives = 20/39 (51%)
Query: 1 MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKIN 39
+E + S H N + H+L +F TPR D++ ++
Sbjct: 324 IEILSSPHYSANGNY-DHVLYRHFQTPRVVQEGDVLCVS 361
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 829 (296.9 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 162/283 (57%), Positives = 213/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q D LQ+ +S + AP +P+VSW D+GGL +K EIL T + +
Sbjct: 672 LLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSL 731
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 732 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 791
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 792 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 851
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 852 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGAD 911
Query: 411 IYSICSNAWTRAIRRIITSAPQ---VKSAPVIVTMDDFLGACS 450
+YS+CS+A A++R + + +S+ +++TM+D L A +
Sbjct: 912 LYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAA 954
Score = 156 (60.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 59/233 (25%), Positives = 100/233 (42%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W+ + GL L E+ + + + G +G +LL GPPG+GKT A
Sbjct: 423 PSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L E ++ F +AR P V+ LD L R
Sbjct: 483 ACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLG 542
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V+ + LL + D + + ++ T+RV L P +R L V + +
Sbjct: 543 EDARVV-ATLRHLLLDEDPLSRCPPLMVVATTSRVQDL-PTDVRTA-FPHELEVPVLSES 599
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L VL+A+ L +V+L L + G D+Y++ ++A A RI
Sbjct: 600 -QRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVG-DLYALLTHASRAACTRI 650
Score = 44 (20.5 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 1 MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVK 60
+E + S H +N H+L +F TPR D++ ++ ++I + + L +
Sbjct: 323 IEVLPSPHCGVNGKY-DHVLYQHFHTPRVVQEGDVLCVSTAG-QVEILE-GSLERLPRWR 379
Query: 61 YVYFKL 66
V+FK+
Sbjct: 380 EVFFKV 385
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 829 (296.9 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 162/283 (57%), Positives = 213/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q D LQ+ +S + AP +P+VSW D+GGL +K EIL T + +
Sbjct: 672 LLAEDFGQALDQLQTAHSQAVGAPKIPSVSWHDVGGLQDVKKEILETIQLPLEHPELLSL 731
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 732 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 791
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 792 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 851
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 852 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFKLEASVSLMNVLDCCPPQLTGAD 911
Query: 411 IYSICSNAWTRAIRRIITSAPQ---VKSAPVIVTMDDFLGACS 450
+YS+CS+A A++R + + +S+ +++TM+D L A +
Sbjct: 912 LYSLCSDAMMTALKRRVRDLEEGLEPRSSALLLTMEDLLQAAA 954
Score = 156 (60.0 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 59/233 (25%), Positives = 100/233 (42%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W+ + GL L E+ + + + G +G +LL GPPG+GKT A
Sbjct: 423 PSGRSPPWDSLSPPGLEALVNELCAVLKPHLQPGGTLLTGTSCVLLQGPPGSGKTTAVTA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L E ++ F +AR P V+ LD L R
Sbjct: 483 ACSRLGLHLLKVPCSSLCADSSRTVETKLQTTFSRARRCRPVVLLLTALDLLGRDRDGLG 542
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V+ + LL + D + + ++ T+RV L P +R L V + +
Sbjct: 543 EDARVV-ATLRHLLLDEDPLSRCPPLMVVATTSRVQDL-PTDVRTA-FPHELEVPVLSES 599
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L VL+A+ L +V+L L + G D+Y++ ++A A RI
Sbjct: 600 -QRLSVLQALTAHLPLGQEVNLSQLARRCAGFVVG-DLYALLTHASRAACTRI 650
Score = 44 (20.5 bits), Expect = 2.4e-85, Sum P(2) = 2.4e-85
Identities = 16/66 (24%), Positives = 32/66 (48%)
Query: 1 MEYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVK 60
+E + S H +N H+L +F TPR D++ ++ ++I + + L +
Sbjct: 323 IEVLPSPHCGVNGKY-DHVLYQHFHTPRVVQEGDVLCVSTAG-QVEILE-GSLERLPRWR 379
Query: 61 YVYFKL 66
V+FK+
Sbjct: 380 EVFFKV 385
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 780 (279.6 bits), Expect = 1.7e-84, Sum P(3) = 1.7e-84
Identities = 161/285 (56%), Positives = 211/285 (74%)
Query: 178 KEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRG--VNR---TSGL 232
KEDF + D + R + L AP VPNV W+D+GGL +K IL T + +++ +SGL
Sbjct: 629 KEDFTKALDRSKKRNASALGAPKVPNVKWDDVGGLEDVKTSILDTVQLPLLHKDLFSSGL 688
Query: 233 -KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
KRSG+LLYGPPGTGKTL+AKAVATEC +NFL+VKGPEL+N YIG+SE+N+R++F KARS
Sbjct: 689 RKRSGVLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARS 748
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVH-TSQDVFILGATNRVDL 350
A PCV+FFDELDSLAP RG S GVMDRVVSQ+LAE+DG+ +SQD+FI+GA+NR DL
Sbjct: 749 ARPCVIFFDELDSLAPARGASGDSGGVMDRVVSQMLAEIDGLSDSSQDLFIIGASNRPDL 808
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
+DPA+LRPGR DK LYVG+ D + VLKA+ RKFKLS+DVSL S+ PS +GAD
Sbjct: 809 IDPALLRPGRFDKLLYVGVNADASYRERVLKALTRKFKLSEDVSLYSVAKKCPSTFTGAD 868
Query: 411 IYSICSNAWTRAIRRIITSA-----PQVKSAP--VIVTMDDFLGA 448
+Y++C++AW +A +R ++ + P + P V+V DF+ A
Sbjct: 869 MYALCADAWFQAAKRKVSKSDSGDMPTEEDDPDSVVVEYVDFIKA 913
Score = 53 (23.7 bits), Expect = 1.7e-84, Sum P(3) = 1.7e-84
Identities = 18/71 (25%), Positives = 31/71 (43%)
Query: 6 SFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNY-LCNVK--YV 62
SF + ++ L YF T R DI +I + +N + + LC+ Y+
Sbjct: 244 SFEAEERQGLIDSALQKYFGTDRQLSRGDIFRIYID-WNCGSSICNPCSQRLCSESDDYI 302
Query: 63 YFKLCSFDSVN 73
YFK+ + + N
Sbjct: 303 YFKVIAMEPSN 313
Score = 45 (20.9 bits), Expect = 1.7e-84, Sum P(3) = 1.7e-84
Identities = 27/120 (22%), Positives = 48/120 (40%)
Query: 95 IRKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSV---TSGFER 151
I I++ F I + L + +R ++ L G + S E++ + TSGF
Sbjct: 519 ISPTIRRCFSHEIRMGSLNDEQRSEMLSQSLQ--GVSQFLNISSDEFMKGLVGQTSGFLP 576
Query: 152 HDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQS---RYSDQLDAPSVPNVSWED 208
DL LV + N + Q + + + + DDL + Q+D + + ED
Sbjct: 577 RDLQALVADAGANLYISQ-----ESETKKINSLSDDLHGVDIHQASQIDNSTEKLTAKED 631
>UNIPROTKB|F1NYD5 [details] [associations]
symbol:PEX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0016561
"protein import into peroxisome matrix, translocation"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0050821
"protein stabilization" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0042623 GO:GO:0016561 OMA:SWHDVGG
GeneTree:ENSGT00550000074953 EMBL:AADN02041201 EMBL:AADN02041202
IPI:IPI00590743 Ensembl:ENSGALT00000013960 Uniprot:F1NYD5
Length = 680
Score = 844 (302.2 bits), Expect = 2.7e-84, P = 2.7e-84
Identities = 166/281 (59%), Positives = 213/281 (75%)
Query: 178 KEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS----GL 232
+EDF D L +S + AP +P+VSW+D+GGL ++K EIL T + + GL
Sbjct: 376 EEDFNVALDQLHDAHSQAVGAPKIPSVSWQDVGGLHEVKKEILDTIQLPLEHPELLSLGL 435
Query: 233 KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
RSGLLLYGPPGTGKTL+AKAVAT C M FL+VKGPEL+N Y+GQSEEN+RNVF +AR+A
Sbjct: 436 CRSGLLLYGPPGTGKTLLAKAVATTCTMTFLSVKGPELINMYVGQSEENVRNVFARARAA 495
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
APC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H+S++VF++GATNR DLLD
Sbjct: 496 APCIIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLHSSREVFVIGATNRPDLLD 555
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
PA+LRPGR DK +YVG+ EDR SQL VL AV RKFKL V+L S++ P+Q++GADIY
Sbjct: 556 PALLRPGRFDKLVYVGVNEDRESQLQVLSAVTRKFKLDPSVNLSSILEECPAQLTGADIY 615
Query: 413 SICSNAWTRAIRRI---ITSAPQVKSAPVIVTMDDFLGACS 450
S+CS+A A++R I +S+ +I+TM+DFL A +
Sbjct: 616 SLCSDAMMCAVKRKVEWIEEGLDTESSALILTMEDFLQAAA 656
Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 60/237 (25%), Positives = 105/237 (44%)
Query: 199 PSVPNVS----WEDIG--GLSKLKAEILSTFRG--VNRTSGLKRSG-LLLYGPPGTGKTL 249
PS P + W + GLS + EI R ++ + L +G +LL GP G+GKT+
Sbjct: 119 PSAPAYTSHEFWSSLSPAGLSDVVKEICDALRPHLTSQAAALSGAGSVLLSGPSGSGKTM 178
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+AV + ++ V L +EE I F +A+ PCV+ +++ L R
Sbjct: 179 AVRAVCSCLNLHLFKVDCVSLCGDTSAATEEKIHMAFAQAQQYHPCVLLLKDIEVLGRDR 238
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
+ + + V+ + QLL + D +S V ++G T + + P ++ L + L
Sbjct: 239 DRLGEDARVI-ATLRQLLLDRDPAQSSHPVLVIGTTCKPQDV-PTDVQTAFLHEVKIEAL 296
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
ED+ + +L + L +VSL L + G D ++ S++ A RI
Sbjct: 297 SEDQ--RRAMLSMLTASLPLGKEVSLAKLARRTAGFVLG-DFCALLSHSSRAACTRI 350
Score = 138 (53.6 bits), Expect = 7.2e-06, P = 7.2e-06
Identities = 43/143 (30%), Positives = 70/143 (48%)
Query: 99 IQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLV 158
+Q FL + + L+E +RR ++ L G + SL + L+ T+GF D L+
Sbjct: 283 VQTAFLHEVKIEALSEDQRRAMLSMLTASL--PLGKEVSLAK-LARRTAGFVLGDFCALL 339
Query: 159 RLS-------VKNKMLKQGINK---RD-------LQKEDFQQIYDDLQSRYSDQLDAPSV 201
S ++ G+N+ RD + +EDF D L +S + AP +
Sbjct: 340 SHSSRAACTRIQALSFPGGLNEEVERDFCTAGFPVLEEDFNVALDQLHDAHSQAVGAPKI 399
Query: 202 PNVSWEDIGGLSKLKAEILSTFR 224
P+VSW+D+GGL ++K EIL T +
Sbjct: 400 PSVSWQDVGGLHEVKKEILDTIQ 422
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 161/283 (56%), Positives = 214/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L ED Q + LQS +S + AP +P+VSW D+GGL ++K EIL T + +
Sbjct: 663 LLAEDLGQALEQLQSAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 722
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 723 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 782
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 783 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 842
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKF+L VSL +++ H P Q++GAD
Sbjct: 843 LDPALLRPGRFDKLVFVGASEDRASQLRVLSAITRKFRLEPSVSLVAVLDHCPPQLTGAD 902
Query: 411 IYSICSNAWTRAIRRIITSAP---QVKSAPVIVTMDDFLGACS 450
+YS+C++A T A++R + + S+ +++TM+D L A +
Sbjct: 903 LYSLCADAMTAALKRRVRDLEDGLEPGSSALLLTMEDLLQAAA 945
Score = 148 (57.2 bits), Expect = 9.3e-07, P = 9.3e-07
Identities = 58/236 (24%), Positives = 102/236 (43%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSG--LKRSG-LLLYGPPGTGKTLIAKA 253
PS + W + GL L E+ + + + G L G +LL GPPG+GKT A
Sbjct: 412 PSGESTPWSSLSPPGLETLVTELCAALKPRLQPGGALLTAPGSVLLRGPPGSGKTTAVTA 471
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
++ L V L G E ++ F +AR P V+ +D L R
Sbjct: 472 ACGRLGLHLLKVPCSSLCADSSGAVETKLQAAFSRARRCRPVVLLLTAVDLLGRDRDGLG 531
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V+ + +LL + D + + + ++ T+R L PA ++ L V + +
Sbjct: 532 EDARVV-ATLRRLLLDEDPLTSHPPLMVVATTSRAQDL-PADVQTA-FPHELEVPVLSEG 588
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+L +L+A+ L +V+L L + G D+Y++ +++ A RI S
Sbjct: 589 -QRLSILQALTAHLPLGQEVNLAQLARRCAGFVVG-DLYALLTHSSRAACTRIKNS 642
>FB|FBgn0033564 [details] [associations]
symbol:Pex6 "Peroxin 6" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE013599
GO:GO:0005524 GO:GO:0007031 HSSP:Q01853 eggNOG:COG0464
GO:GO:0017111 KO:K13339 GeneTree:ENSGT00550000074953
UniGene:Dm.6792 EMBL:AY058375 RefSeq:NP_001027403.1
RefSeq:NP_001163114.1 SMR:Q9V5R2 EnsemblMetazoa:FBtr0100498
EnsemblMetazoa:FBtr0301705 GeneID:3772165 KEGG:dme:Dmel_CG11919
UCSC:CG11919-RA FlyBase:FBgn0033564 InParanoid:Q9V5R2 OMA:KANIFLY
OrthoDB:EOG4DR7T7 NextBio:852681 Uniprot:Q9V5R2
Length = 897
Score = 768 (275.4 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 165/331 (49%), Positives = 219/331 (66%)
Query: 105 KTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKN 164
K I LPL E + Q+ + + + ++++ +++ + GF DL L +V+
Sbjct: 518 KAIEQLPLFSRENQS--QF-MPRISPSWRETLNVLQDVAAKSQGFLLGDLQLLYDNAVRM 574
Query: 165 KMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTF- 223
K ++ + + L F + D+QS ++D L AP VP V W DIGGL+KLK EI S+
Sbjct: 575 K-IRNRLGRTTLDMSHFAKNLTDMQSSFADSLGAPKVPKVYWSDIGGLAKLKDEIQSSIG 633
Query: 224 ---RGVNRTS-GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSE 279
+ V+ L+RSG+LLYGPPGTGKTL+AKAVATEC ++FL+V+GPELLN Y+GQSE
Sbjct: 634 LPLKHVHLMGKNLRRSGILLYGPPGTGKTLVAKAVATECNLSFLSVQGPELLNMYVGQSE 693
Query: 280 ENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVH---TS 336
+N+R VF +ARSAAPCV+F DELDSLAP RG S GVMDRVVSQLLAEMDG+ TS
Sbjct: 694 QNVREVFSRARSAAPCVLFLDELDSLAPNRGVAGDSGGVMDRVVSQLLAEMDGMSDGDTS 753
Query: 337 QDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLD 396
+ +FIL ATNR DL+DPA+LRPGR DK YVG + VL+A ++F L V ++
Sbjct: 754 KPIFILAATNRPDLIDPALLRPGRFDKLFYVGPCSTAEDKAAVLRAQTQRFALDAGVDME 813
Query: 397 SLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ S+MSGAD+YSICSNAW A+RR I
Sbjct: 814 QIAERLKSEMSGADLYSICSNAWLSAVRRTI 844
Score = 53 (23.7 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 15/65 (23%), Positives = 31/65 (47%)
Query: 3 YIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYL--CNVK 60
Y+ + + + ++ +L+NYF TPR H +I + + Y YL +++
Sbjct: 218 YLVADPHELPAELTEVILSNYFNTPRLMHRGHTYRIEVNAELVGTATYAHY-YLIFAHLR 276
Query: 61 YVYFK 65
+V+ K
Sbjct: 277 HVHLK 281
Score = 41 (19.5 bits), Expect = 8.3e-83, Sum P(3) = 8.3e-83
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 95 IRKQIQKLFLKTINV-LPLTEPERRLL 120
++ IQ LFL+ IN+ +P E +L
Sbjct: 475 LKPMIQGLFLEIINIDMPSKEERFEIL 501
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 829 (296.9 bits), Expect = 1.0e-82, P = 1.0e-82
Identities = 163/283 (57%), Positives = 215/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q + LQ+ +S + AP +P+VSW D+GGL ++K EIL T + +
Sbjct: 674 LLAEDFGQALEQLQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 733
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 734 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 793
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 794 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 853
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 854 LDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGAD 913
Query: 411 IYSICSNAWTRAI-RRI--ITSAPQVKSAPVIVTMDDFLGACS 450
+YS+CS+A T A+ RR+ + + S+ +++TM+D L A +
Sbjct: 914 LYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAA 956
Score = 169 (64.5 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 59/236 (25%), Positives = 106/236 (44%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W + GL L +E+ + + + G +G +LL GPPG GKT + A
Sbjct: 423 PSEESTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAA 482
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ ++ L V L + G E ++ +F +AR P V+ +D L R
Sbjct: 483 ACSHLGLHLLKVPCSSLCAESSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLG 542
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + VM V+ LL D +++ + ++ T+R L PA ++ + L E +
Sbjct: 543 EDARVM-AVLRHLLLNEDPLNSCPPLMVVATTSRAQDL-PADVQTAFPHELEVPALSEGQ 600
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+L +L+A+ L +V+L L + G D+Y++ +++ A RI S
Sbjct: 601 --RLSILRALTAHLPLGQEVNLAQLARRCAGFVVG-DLYALLTHSSRAACTRIKNS 653
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 162/283 (57%), Positives = 214/283 (75%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS---- 230
L EDF Q + Q+ +S + AP +P+VSW D+GGL ++K EIL T + +
Sbjct: 264 LLAEDFGQALELQQTAHSQAVGAPKIPSVSWHDVGGLQEVKKEILETIQLPLEHPELLSL 323
Query: 231 GLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
GL+RSGLLL+GPPGTGKTL+AKAVATEC + FL+VKGPEL+N Y+GQSEEN+R VF +AR
Sbjct: 324 GLRRSGLLLHGPPGTGKTLLAKAVATECSLTFLSVKGPELINMYVGQSEENVREVFARAR 383
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+AAPC++FFDELDSLAP RG+ S GVMDRVVSQLLAE+DG+H++QDVF++GATNR DL
Sbjct: 384 AAAPCIIFFDELDSLAPSRGRSGDSGGVMDRVVSQLLAELDGLHSTQDVFVIGATNRPDL 443
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LDPA+LRPGR DK ++VG EDR SQL VL A+ RKFKL VSL +++ P Q++GAD
Sbjct: 444 LDPALLRPGRFDKLVFVGANEDRASQLRVLSAITRKFKLEPSVSLVNVLDCCPPQLTGAD 503
Query: 411 IYSICSNAWTRAI-RRI--ITSAPQVKSAPVIVTMDDFLGACS 450
+YS+CS+A T A+ RR+ + + S+ +++TM+D L A +
Sbjct: 504 LYSLCSDAMTAALKRRVHDLEEGLEPGSSALMLTMEDLLQAAA 546
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 56/233 (24%), Positives = 105/233 (45%)
Query: 199 PSVPNVSWEDIG--GLSKLKAEILSTFRGVNRTSGLKRSG---LLLYGPPGTGKTLIAKA 253
PS + W + GL L +E+ + + + G +G +LL GPPG GKT + A
Sbjct: 13 PSEKSTLWSSLSPPGLEALVSELCAVLKPRLQPGGALLTGTSSVLLRGPPGCGKTTVVAA 72
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
++ ++ L V L G E ++ +F +AR P V+ +D L R
Sbjct: 73 ACSQLGLHLLKVPCSSLCADSSGAVETKLQAIFSRARRCRPAVLLLTAVDLLGRDRDGLG 132
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ + V+ + LL + D +++ + ++ T+R L PA ++ + L E +
Sbjct: 133 EDARVV-AALRHLLLDEDPLNSCPPLMVVATTSRAQDL-PADVQTAFPHELEVPALSEGQ 190
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L +L+A+ L +V+L L + G D+Y++ +++ A RI
Sbjct: 191 --RLSILRALTAHLPLGQEVNLAQLARRCAGFVVG-DLYALLTHSSRAACTRI 240
>ZFIN|ZDB-GENE-081104-252 [details] [associations]
symbol:pex6 "peroxisomal biogenesis factor 6"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-081104-252
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074953
EMBL:CU469387 IPI:IPI00836958 Ensembl:ENSDART00000104613
Bgee:F1QMB0 Uniprot:F1QMB0
Length = 1071
Score = 807 (289.1 bits), Expect = 2.2e-80, P = 2.2e-80
Identities = 166/293 (56%), Positives = 210/293 (71%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTS----GLK 233
EDF D LQ +S + AP +P VSW+D+GGL ++K EIL T + + GL+
Sbjct: 768 EDFSAALDVLQEAHSQAIGAPKIPAVSWQDVGGLQQVKKEILDTIQLPLEHPELLSLGLR 827
Query: 234 RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA 293
RSGLLLYGPPGTGKTL+AKAVATEC M FL+VKGPEL+N Y+GQSEENIR V KARSAA
Sbjct: 828 RSGLLLYGPPGTGKTLLAKAVATECTMTFLSVKGPELINMYVGQSEENIRQVSSKARSAA 887
Query: 294 PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDP 353
PC++FFDELDSLAP RG S GVMDRVVSQLLAE+DG+H+S DVF++GATNR DLLD
Sbjct: 888 PCIIFFDELDSLAPNRGHSGDSGGVMDRVVSQLLAELDGLHSSGDVFVIGATNRPDLLDQ 947
Query: 354 AILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYS 413
++LRPGR DK +YVG+ EDR SQL VLKA++RKFK+ V L +V P +++GAD+YS
Sbjct: 948 SLLRPGRFDKLVYVGINEDRESQLQVLKAILRKFKVDASVCLSDIVESCPPRLTGADLYS 1007
Query: 414 ICSNAWTRAIRRIITSAPQ-VKSAPVIVTM--DDFLGACSLATAPDKFSQSVA 463
+CS+A A++R I+ + V S +T+ +DF A S P Q ++
Sbjct: 1008 LCSDAMMCAVKRKISRITEGVDSELSSLTLCSEDFSEALS-GLQPSVSEQQIS 1059
Score = 145 (56.1 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 75/282 (26%), Positives = 124/282 (43%)
Query: 201 VPNVS--WEDIG--GLSKLKAEILSTFRG-VNR-TSGLKRS-GLLLYGPPGTGKTLIAKA 253
+P S W + GLS ++++ + +N T LKR +LL GP G+GK +A
Sbjct: 519 LPEASSFWTSLSPPGLSSTVEKLITIIQPHLNESTLILKRGCSILLMGPNGSGKFTAVRA 578
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
V+ ++ + V L SE I++VF +A PC++ L L GQ
Sbjct: 579 VSRRLHLHLIKVDCVTLCADTAAASEAKIKSVFERAELHHPCLLLLRNLQLL----GQSR 634
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ RV + L + VHTS V ++G+ + L P+ + + + L ED+
Sbjct: 635 DGAETDCRVAATLCQLIAAVHTS--VVVVGSVSSQHEL-PSDVMAAFVHQVAIESLSEDQ 691
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII-TSAPQ 432
VL ++ L DV+L + + G D+ ++ +NA A RR++ T P+
Sbjct: 692 RRM--VLSSLSEDLLLGKDVNLGRIAKQTAGFVLG-DLCALLTNAGKAAHRRLVETYFPE 748
Query: 433 VKS---------APVIVTMDDFLGACSLATAPDKFSQSV-AP 464
S + V VT +DF A L + SQ++ AP
Sbjct: 749 AVSEQEEEDLCVSGVSVTSEDFSAA--LDVLQEAHSQAIGAP 788
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 753 (270.1 bits), Expect = 2.1e-76, Sum P(2) = 2.1e-76
Identities = 163/359 (45%), Positives = 237/359 (66%)
Query: 95 IRKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDL 154
+ +++ F I + E +R +++Y L D G S ++ LS T+ F +L
Sbjct: 792 LSNKVRNWFKHEITLNSPDENQRFKILKYLTKNLPIDIGNTVS-IKNLSIRTASFLNSNL 850
Query: 155 TCLVRLSVKNKMLKQGINKRDLQKEDFQ--QIY--------DDLQSRYSDQ-------LD 197
L++ S N LK+ ++ + + ++ + +IY DD+Q S+ +
Sbjct: 851 RALIQRSSINA-LKRVLSIQQMMNDEIKPIEIYNCGFLVMGDDIQKSLSEMQEYQSSSIG 909
Query: 198 APSVPNVSWEDIGGLSKLKAEILSTFR-GVNR----TSGL-KRSGLLLYGPPGTGKTLIA 251
AP +PNVSW+D+GGL+ +K+EI+ T + + SG+ KRSG+LL+GPPGTGKTL+A
Sbjct: 910 APKIPNVSWDDVGGLANVKSEIMDTIQLPLEHPHLFASGIGKRSGILLFGPPGTGKTLLA 969
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
KA+ATEC +NFL+VKGPEL+N YIG+SE+NIR +F KAR A PCV+FFDELDSLAP RG
Sbjct: 970 KAIATECSLNFLSVKGPELINMYIGESEKNIREIFNKARQAKPCVIFFDELDSLAPSRGN 1029
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S GVMDRVVSQLLAE+DG+ S DVFI+GATNR DLLD +++RPGRLD+ LY+G+
Sbjct: 1030 GADSGGVMDRVVSQLLAELDGMQKSSDVFIIGATNRPDLLDSSLMRPGRLDRLLYLGISS 1089
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA 430
++ +Q +L+A+ RKF L+DDV L +V + P ++GAD Y++ S+A + A IT++
Sbjct: 1090 EKENQFKILQALTRKFNLADDVDLRKVVENCPMNLTGADFYALASDAMSNAFHERITAS 1148
Score = 49 (22.3 bits), Expect = 2.1e-76, Sum P(2) = 2.1e-76
Identities = 12/28 (42%), Positives = 14/28 (50%)
Query: 17 SHLLTNYFATPRYHHLNDIVKINLKKYN 44
SH L YF R NDI+ I+ K N
Sbjct: 517 SHQLEKYFQKKRLLKQNDIIVISTKVNN 544
Score = 41 (19.5 bits), Expect = 1.5e-75, Sum P(2) = 1.5e-75
Identities = 7/33 (21%), Positives = 18/33 (54%)
Query: 93 VLIRKQIQKLFLKTINVLPLTEPERRLLIQYQL 125
+ + K +K+ L +IN L ++ +L+ + +
Sbjct: 64 IFLYKNTKKINLNSINKLQYKSNKKEILVSFDI 96
>WB|WBGene00004195 [details] [associations]
symbol:prx-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040015 "negative
regulation of multicellular organism growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0002119 GO:GO:0040015 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00550000074953 EMBL:AB010968
EMBL:AB012224 EMBL:FO080622 PIR:T37276 RefSeq:NP_504268.1
UniGene:Cel.19362 ProteinModelPortal:G5EFR8 SMR:G5EFR8
EnsemblMetazoa:F39G3.7 GeneID:266912 KEGG:cel:CELE_F39G3.7
CTD:266912 WormBase:F39G3.7 OMA:AVATEFK NextBio:953402
Uniprot:G5EFR8
Length = 720
Score = 689 (247.6 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 151/340 (44%), Positives = 215/340 (63%)
Query: 99 IQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLV 158
++ L L T + + E +R+ +QY L+ L +++ TSGF +L LV
Sbjct: 373 VKNLALYTFSAEFMDENDRKTWLQYYLN---------EKLANHVAKKTSGFTLAELEKLV 423
Query: 159 RLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAE 218
+ K K+ + +++ ++ + D S ++D + AP +PNV WED+GGL + K
Sbjct: 424 KNGKKVKI-------EEKEEKVYEDLIDKRNSNFADAIGAPKIPNVRWEDVGGLEETKQT 476
Query: 219 ILSTFR-GVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQ 277
+L + R + + LKRSG++LYG PG GKTLIAKAVATE ++ FL+VKGPELLNKY+GQ
Sbjct: 477 VLESIRTNLFGSRALKRSGIILYGSPGCGKTLIAKAVATEFKIAFLSVKGPELLNKYVGQ 536
Query: 278 SEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQ 337
SEEN+R VF +A+ A+PCV+FFDE+DSLAP RG+ S GV+DR+VSQLLAE+D +H S
Sbjct: 537 SEENLRKVFERAKQASPCVIFFDEIDSLAPNRGRNGDSGGVIDRIVSQLLAELDKLHNSP 596
Query: 338 --DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
VF++GATNR DLLD +++ PGR DK + V ED S+ +L+AV RK + +DV L
Sbjct: 597 LTKVFVMGATNRPDLLDNSLMTPGRFDKLVEVKPGEDVESKTKILEAVSRKMRFEEDVDL 656
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVKS 435
+ +MSGA ++SI SNA AI I S K+
Sbjct: 657 REIASKVDEKMSGAQLFSIISNAGMAAIVETIQSIEDGKT 696
Score = 47 (21.6 bits), Expect = 6.8e-71, Sum P(2) = 6.8e-71
Identities = 11/38 (28%), Positives = 18/38 (47%)
Query: 30 HHLNDIVKINLKKYNLDIFKYDEVN-YLCNVKYVYFKL 66
HHL I+K Y D+ + N Y ++++KL
Sbjct: 160 HHLKQILKSANVFYKNDVIRITNYNAYTDKTTHLFYKL 197
>ASPGD|ASPL0000034610 [details] [associations]
symbol:pexF species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0006625 "protein targeting to peroxisome" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0001302 "replicative cell
aging" evidence=IEA] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:BN001306 GO:GO:0017111
EnsemblFungi:CADANIAT00010163 OMA:CFSGDWV Uniprot:C8VJ57
Length = 1476
Score = 727 (261.0 bits), Expect = 9.9e-71, P = 9.9e-71
Identities = 144/290 (49%), Positives = 202/290 (69%)
Query: 159 RLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAE 218
+++V++ +L G R + K DF D + ++D + AP +PNVSWED+GGL+ +K
Sbjct: 977 KITVRDVLLAGGEAVRGVTKADFDAAVDAARKNFADSIGAPKIPNVSWEDVGGLTNVKDA 1036
Query: 219 ILSTFR-GVNR----TSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
++ T + + R G+K RSG+L YGPPGTGKTL+AKA+ATE +NF +VKGPELLN
Sbjct: 1037 LVETIQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEFSLNFFSVKGPELLN 1096
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDG 332
YIG+SE N+R VF +AR A PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+DG
Sbjct: 1097 MYIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDG 1156
Query: 333 VHTSQD----VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFK 388
++ ++ VF++GATNR DLLD A+LRPGR DK LY+G+ + Q +L+A+ RKF
Sbjct: 1157 MNGGEENSGGVFVIGATNRPDLLDTALLRPGRFDKMLYLGVSDTHEKQATILEALTRKFA 1216
Query: 389 LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ-VKSAP 437
L+ D+SL + P +GAD+Y++CS+A +AI R T+ + +K P
Sbjct: 1217 LAPDLSLARVSERLPLTYTGADLYALCSDAMLKAITRKATAVDEKIKQLP 1266
>SGD|S000005273 [details] [associations]
symbol:PEX6 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA;IMP;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IMP;IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0016562
"protein import into peroxisome matrix, receptor recycling"
evidence=IGI;IDA;IMP] [GO:0001302 "replicative cell aging"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005273 GO:GO:0005829 GO:GO:0005524 GO:GO:0005777
EMBL:X83226 EMBL:BK006947 GO:GO:0001302 GO:GO:0016887 GO:GO:0005778
GO:GO:0046982 eggNOG:COG0464 EMBL:Z46259 GO:GO:0016562 KO:K13339
GeneTree:ENSGT00550000074953 OrthoDB:EOG48PQTF EMBL:L20789
EMBL:Z71605 PIR:S43211 RefSeq:NP_014070.1 ProteinModelPortal:P33760
SMR:P33760 DIP:DIP-2621N IntAct:P33760 MINT:MINT-423224
STRING:P33760 PaxDb:P33760 PeptideAtlas:P33760 EnsemblFungi:YNL329C
GeneID:855387 KEGG:sce:YNL329C CYGD:YNL329c HOGENOM:HOG000248247
OMA:FTGADFY NextBio:979190 ArrayExpress:P33760
Genevestigator:P33760 GermOnline:YNL329C Uniprot:P33760
Length = 1030
Score = 704 (252.9 bits), Expect = 4.2e-69, P = 4.2e-69
Identities = 139/258 (53%), Positives = 183/258 (70%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TS 230
+ +ED + ++ +S + AP +PNV+W+DIGG+ +K EIL T + TS
Sbjct: 701 ITQEDLSKATSKARNEFSVSIGAPQIPNVTWDDIGGIDFVKGEILDTIDMPLKHPELFTS 760
Query: 231 GLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKA 289
G+K RSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF KA
Sbjct: 761 GMKKRSGILFYGPPGTGKTLMAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQKA 820
Query: 290 RSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD-VFILGATNRV 348
R A PCV+FFDE+DS+AP+RG + S GVMDR+VSQLLAE+DG+ T D VF++GATNR
Sbjct: 821 REAKPCVIFFDEIDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSTDADGVFVIGATNRP 880
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
DLLD A+LRPGR DK LY+G+ + QL +L+A+ RKF L +DV L L P +G
Sbjct: 881 DLLDEALLRPGRFDKLLYLGIPDTDTKQLNILEALTRKFVLDNDVKLIELAKLCPFNYTG 940
Query: 409 ADIYSICSNAWTRAIRRI 426
AD Y++CS+A A+ RI
Sbjct: 941 ADFYALCSDAMLNAMSRI 958
>CGD|CAL0005974 [details] [associations]
symbol:PEX6 species:5476 "Candida albicans" [GO:0006631
"fatty acid metabolic process" evidence=ISO] [GO:0006625 "protein
targeting to peroxisome" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=IEA;ISO] [GO:0046982 "protein heterodimerization
activity" evidence=IEA;ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=IEA;ISO]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA] [GO:0001302
"replicative cell aging" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 693 (249.0 bits), Expect = 5.8e-69, Sum P(2) = 5.8e-69
Identities = 135/256 (52%), Positives = 183/256 (71%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK 233
+DF ++ ++++SD + AP +PNV WEDIGGL +K EIL T + +GLK
Sbjct: 787 DDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNNGLK 846
Query: 234 -RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
RSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF +AR A
Sbjct: 847 KRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDA 906
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTS--QDVFILGATNRVDL 350
PCV+FFDELDS+AP+RG + S GVMDR+VSQLLAE+DG+ + VF++GATNR DL
Sbjct: 907 KPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDL 966
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LD A+LRPGR DK LY+G+ + Q +L+A+ RKFKL D+V+L+ + +GAD
Sbjct: 967 LDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGAD 1026
Query: 411 IYSICSNAWTRAIRRI 426
Y++CS++ A+ R+
Sbjct: 1027 FYALCSDSMLNAMTRV 1042
Score = 40 (19.1 bits), Expect = 5.8e-69, Sum P(2) = 5.8e-69
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 EYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNL 45
E I S +N ++L P Y + I+K+N +Y L
Sbjct: 55 EEINSTTETVNN---KYVLVKLLGAPDYFNKFRIMKLNQVRYQL 95
>UNIPROTKB|Q59ZE6 [details] [associations]
symbol:PEX6 "Likely peroxisomal biogenesis AAA ATPase Pex6"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0016562 "protein import into
peroxisome matrix, receptor recycling" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005974 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 GO:GO:0016887 GO:GO:0046982 eggNOG:COG0464
EMBL:AACQ01000094 EMBL:AACQ01000093 GO:GO:0016562 KO:K13339
RefSeq:XP_714932.1 RefSeq:XP_714995.1 ProteinModelPortal:Q59ZE6
STRING:Q59ZE6 GeneID:3643407 GeneID:3643436 KEGG:cal:CaO19.11057
KEGG:cal:CaO19.3573 Uniprot:Q59ZE6
Length = 1157
Score = 693 (249.0 bits), Expect = 5.8e-69, Sum P(2) = 5.8e-69
Identities = 135/256 (52%), Positives = 183/256 (71%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK 233
+DF ++ ++++SD + AP +PNV WEDIGGL +K EIL T + +GLK
Sbjct: 787 DDFNAAINEARNQFSDSIGAPRIPNVKWEDIGGLDLVKDEILDTIDMPLKHPELFNNGLK 846
Query: 234 -RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
RSG+L YGPPGTGKTL+AKA+AT +NF +VKGPELLN YIG+SE N+R VF +AR A
Sbjct: 847 KRSGILFYGPPGTGKTLLAKAIATNFSLNFFSVKGPELLNMYIGESEANVRRVFQRARDA 906
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTS--QDVFILGATNRVDL 350
PCV+FFDELDS+AP+RG + S GVMDR+VSQLLAE+DG+ + VF++GATNR DL
Sbjct: 907 KPCVIFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGMSSEGGDGVFVVGATNRPDL 966
Query: 351 LDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
LD A+LRPGR DK LY+G+ + Q +L+A+ RKFKL D+V+L+ + +GAD
Sbjct: 967 LDEALLRPGRFDKMLYLGISDTDEKQTKILEALTRKFKLDDNVNLEQVAAKCSFTFTGAD 1026
Query: 411 IYSICSNAWTRAIRRI 426
Y++CS++ A+ R+
Sbjct: 1027 FYALCSDSMLNAMTRV 1042
Score = 40 (19.1 bits), Expect = 5.8e-69, Sum P(2) = 5.8e-69
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 2 EYIESFHNRINEDILSHLLTNYFATPRYHHLNDIVKINLKKYNL 45
E I S +N ++L P Y + I+K+N +Y L
Sbjct: 55 EEINSTTETVNN---KYVLVKLLGAPDYFNKFRIMKLNQVRYQL 95
>UNIPROTKB|G4NBI6 [details] [associations]
symbol:MGG_00529 "Peroxisomal biogenesis factor 6"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CM001235 GO:GO:0017111 KO:K13339
RefSeq:XP_003718527.1 ProteinModelPortal:G4NBI6
EnsemblFungi:MGG_00529T0 GeneID:2674587 KEGG:mgr:MGG_00529
Uniprot:G4NBI6
Length = 1375
Score = 691 (248.3 bits), Expect = 5.8e-67, P = 5.8e-67
Identities = 135/276 (48%), Positives = 190/276 (68%)
Query: 160 LSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI 219
+++++ + G R L K D + + ++D + AP +P+V+W+D+GGL +K +
Sbjct: 949 VTLRDVQVAGGTAVRGLTKGDLDTAVEAARKNFADAIGAPKIPSVTWDDVGGLGNVKDAV 1008
Query: 220 LSTFR-GVNR----TSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNK 273
+ T + + R G+K RSG+L YGPPGTGKTL+AKA+ATE +NF +VKGPELLN
Sbjct: 1009 METIQLPLERPELFAKGMKKRSGILFYGPPGTGKTLLAKAIATEYSLNFFSVKGPELLNM 1068
Query: 274 YIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
YIG+SE N+R VF +AR A PCVVFFDELDS+AP+RG + S GVMDR+VSQLLAE+DG+
Sbjct: 1069 YIGESEANVRRVFQRARDARPCVVFFDELDSVAPKRGNQGDSGGVMDRIVSQLLAELDGM 1128
Query: 334 HTSQD----VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
+ D VF++GATNR DLLD A+LRPGR DK LY+G+ + QL +++A+ RKF L
Sbjct: 1129 SSGDDSGGGVFVIGATNRPDLLDQALLRPGRFDKLLYLGVSDTHEKQLTIMEALTRKFTL 1188
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
VSL ++ P +GAD Y++CS+A +A+ R
Sbjct: 1189 HPSVSLRAVAEKLPFTYTGADFYALCSDAMLKAVTR 1224
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 632 (227.5 bits), Expect = 2.1e-61, P = 2.1e-61
Identities = 122/234 (52%), Positives = 171/234 (73%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLK-RSGLLLYGPPGTGKTLIAKA 253
+VP V+W+DIGGL + K + T + + + GLK RSG+LLYGPPGTGKTL+AKA
Sbjct: 648 TVPKVNWDDIGGLEEAKTVLRDTLQLPLQFPELFSQGLKPRSGVLLYGPPGTGKTLLAKA 707
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VATE + F+++KGPELLN Y+G+SE N+RNVF KAR+++PCV+FFDELDS+AP RG
Sbjct: 708 VATELSLEFVSIKGPELLNMYVGESEANVRNVFEKARNSSPCVIFFDELDSIAPHRGNSS 767
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQD--VFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S VMDRVVSQLLAE+D + + VF++GATNR DLLDP++LRPGR DK +Y+G+ +
Sbjct: 768 DSGNVMDRVVSQLLAELDSISKDNNKYVFVIGATNRPDLLDPSLLRPGRFDKLVYLGINK 827
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
S+ +L+A+ + FKL + + L+ + + +GAD+Y++CS+A AI+R
Sbjct: 828 SEESKASMLRALTKTFKLDETIDLNEIAKNCHPNFTGADMYALCSDAVLSAIKR 881
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 564 (203.6 bits), Expect = 8.0e-57, Sum P(2) = 8.0e-57
Identities = 118/235 (50%), Positives = 161/235 (68%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA
Sbjct: 468 VPNTTWTDIGGLESVKKELQELVQYPVEHPDKFLKFGMQPSRGVLFYGPPGCGKTLLAKA 527
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF++VKGPELL + G+SE N+R++F KARSAAPCV+FFDELDS+A RG
Sbjct: 528 IANECQANFISVKGPELLTMWFGESEANVRDIFDKARSAAPCVLFFDELDSIAKARGGNV 587
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++Q+L EMDG+ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L +D
Sbjct: 588 GDAGGAADRVINQILTEMDGMGAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDD 647
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ S+ +LKA +RK L+ +V L + + SGAD+ IC A AIR+ I
Sbjct: 648 K-SREAILKANLRKSPLAKEVDL-TYIAKVTQGFSGADLTEICQRACKLAIRQAI 700
Score = 416 (151.5 bits), Expect = 4.3e-38, P = 4.3e-38
Identities = 102/278 (36%), Positives = 160/278 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+L+YGPPGTGKTLIA+
Sbjct: 194 SLNAVGYDDIGGCRKQLAQIKEMVELPLRHPSLFKAIGVKPPRGILMYGPPGTGKTLIAR 253
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A +P ++F DE+D++AP+R
Sbjct: 254 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNSPAIIFIDEIDAIAPKR--- 310
Query: 313 DQSSGVMDR-VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
D++ G ++R +VSQLL MDG+ S + ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 311 DKTHGEVERRIVSQLLTLMDGMKKSSHLIVMAATNRPNSIDPALRRFGRFDREIDIGI-P 369
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IIT 428
D +L VL+ + KL DDV L+ + + GAD+ S+CS A + IR +I
Sbjct: 370 DATGRLEVLRIHTKNMKLHDDVDLEQIAAESHGHV-GADLASLCSEAALQQIREKMDLID 428
Query: 429 SAPQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
A V+ VTM++F A + ++P ++V
Sbjct: 429 LEDDKIDAEVLASLAVTMENFRYAMT-KSSPSALRETV 465
Score = 39 (18.8 bits), Expect = 8.0e-57, Sum P(2) = 8.0e-57
Identities = 16/69 (23%), Positives = 30/69 (43%)
Query: 157 LVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSD---QLDAPSVPNVSWEDIGGLS 213
++R+ KN L ++ + E + DL S S+ Q + + ED
Sbjct: 377 VLRIHTKNMKLHDDVDLEQIAAESHGHVGADLASLCSEAALQQIREKMDLIDLED----D 432
Query: 214 KLKAEILST 222
K+ AE+L++
Sbjct: 433 KIDAEVLAS 441
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 578 (208.5 bits), Expect = 4.2e-56, P = 4.2e-56
Identities = 119/235 (50%), Positives = 161/235 (68%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPN++WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPNITWEDIGGLDDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNV 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ + ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSSKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ S++ +LKA +RK +S DV LD L + SGAD+ IC A AIR I
Sbjct: 651 K-SRIAILKANLRKSPISKDVDLDFLAK-MTNGFSGADLTEICQRACKLAIRESI 703
Score = 440 (159.9 bits), Expect = 1.1e-40, P = 1.1e-40
Identities = 107/277 (38%), Positives = 160/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG+ K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGVRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 120/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 475 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 534
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 535 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 594
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 595 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 654
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV LD L + SGAD+ IC A AIR I S
Sbjct: 655 K-SRVAILKANLRKSPVAKDVDLDFLAK-MTNGFSGADLTEICQRACKLAIRESIES 709
Score = 415 (151.1 bits), Expect = 5.8e-38, P = 5.8e-38
Identities = 104/279 (37%), Positives = 158/279 (56%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG-Q 311
AVA E F + GPE+++K G+SE N+R F + AP ++F DELD++A
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEETEKNAPAIIFIDELDAIASDDCFP 316
Query: 312 EDQSSGVMDR-VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY 370
Q+ G ++R +VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 317 SPQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI- 375
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---II 427
D +L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 376 PDATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLI 434
Query: 428 TSAPQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 435 DLEDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 472
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 120/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 469 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 528
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 529 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 588
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 589 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 648
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV LD L + SGAD+ IC A AIR I S
Sbjct: 649 K-SRVAILKANLRKSPVAKDVDLDFLAK-MTNGFSGADLTEICQRACKLAIRESIES 703
Score = 345 (126.5 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 97/278 (34%), Positives = 145/278 (52%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+ E R A F D P
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGEGESACRKKISPAPPPLKTAGIFKS-DDCFP----S 311
Query: 313 DQSSGVMDR-VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
Q+ G ++R +VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 312 PQTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-P 370
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IIT 428
D +L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 371 DATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLID 429
Query: 429 SAPQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 430 LEDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 466
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 120/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 203 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 262
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 263 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 322
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 323 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 382
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV LD L + SGAD+ IC A AIR I S
Sbjct: 383 K-SRVAILKANLRKSPVAKDVDLDFLAK-MTNGFSGADLTEICQRACKLAIRESIES 437
Score = 316 (116.3 bits), Expect = 2.9e-26, P = 2.9e-26
Identities = 76/203 (37%), Positives = 118/203 (58%)
Query: 267 GPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQL 326
GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E V R+VSQL
Sbjct: 3 GPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--EKTHGEVERRIVSQL 60
Query: 327 LAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRK 386
L MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D +L +L+ +
Sbjct: 61 LTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEILQIHTKN 119
Query: 387 FKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI---- 439
KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I + A V+
Sbjct: 120 MKLADDVDLEQVGNETHGHV-GADLAALCSEAALQAIRKKMDLIDLEDETIDAEVMNSLA 178
Query: 440 VTMDDFLGACSLATAPDKFSQSV 462
VTMDDF A S + P ++V
Sbjct: 179 VTMDDFRWALSQSN-PSALRETV 200
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 119/235 (50%), Positives = 160/235 (68%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ S++ +LKA +RK ++ DV LD L + SGAD+ IC A AIR I
Sbjct: 651 K-SRIAILKANLRKSPVAKDVDLDFLAK-MTNGFSGADLTEICQRACKLAIRESI 703
Score = 441 (160.3 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 108/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KLSDDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 STGRLEILQIHTKNMKLSDDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
Identities = 120/235 (51%), Positives = 159/235 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 534 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSA 593
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG++ + VFI+GATNR D++D A+LRPGRLD+ +Y+ L D
Sbjct: 594 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL-PD 652
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+L + KA +RK ++ DV + +L + SGADI IC A AIR I
Sbjct: 653 EDSRLNIFKACLRKSPVAKDVDVTALAK-YTQGFSGADITEICQRACKYAIRENI 706
Score = 419 (152.6 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 92/235 (39%), Positives = 143/235 (60%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I + ++ G+K G+LLYGPPG+GKTL
Sbjct: 197 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E + V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 317 --EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + + GAD+ ++C+ A + IR
Sbjct: 375 -PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYV-GADLAALCTEAALQCIR 427
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQDLVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 571 (206.1 bits), Expect = 2.3e-55, P = 2.3e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 705
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 571 (206.1 bits), Expect = 3.2e-55, P = 3.2e-55
Identities = 119/237 (50%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 487 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 546
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 547 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 606
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 607 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 666
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 667 K-SRVAILKANLRKSPVAKDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 721
Score = 438 (159.2 bits), Expect = 1.9e-40, P = 1.9e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 213 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 272
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 273 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 330
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 331 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 389
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 390 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 448
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 449 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 484
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 569 (205.4 bits), Expect = 4.8e-55, P = 4.8e-55
Identities = 118/235 (50%), Positives = 159/235 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNVSWEDIGGL +K E+ T + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 475 VPNVSWEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 534
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 535 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGNSV 594
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++QLL EMDG++ + VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 595 GDAGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPL-PD 653
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ + K+ +RK ++ DV L +L + SGADI IC + AIR I
Sbjct: 654 EESRYQIFKSCLRKSPVAKDVDLRALAK-YTQGFSGADITEICQRSCKYAIRENI 707
Score = 416 (151.5 bits), Expect = 4.6e-38, P = 4.6e-38
Identities = 92/235 (39%), Positives = 142/235 (60%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTL 249
D + V ++D+GG+ K A+I + ++ G+K G+LLYGPPG+GKTL
Sbjct: 198 DEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 257
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 258 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 317
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 318 --EKTHGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 375
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + + GAD+ ++C+ A + IR
Sbjct: 376 -PDEIGRLEVLRIHTKNMKLAEDVDLERVSKDTHGYV-GADLAALCTEAALQCIR 428
>UNIPROTKB|E9PE75 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR025653 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005778 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:AC007566 GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12
HGNC:HGNC:8850 InterPro:IPR015343 Pfam:PF09263 IPI:IPI00924762
ProteinModelPortal:E9PE75 SMR:E9PE75 Ensembl:ENST00000438045
UCSC:uc011khs.2 ArrayExpress:E9PE75 Bgee:E9PE75 Uniprot:E9PE75
Length = 961
Score = 574 (207.1 bits), Expect = 6.0e-55, P = 6.0e-55
Identities = 136/354 (38%), Positives = 216/354 (61%)
Query: 93 VLIRKQIQKLFLKTINVLPLTEPER-RLL---IQYQLDCLGGDYGFDASLVEYLSSVTSG 148
+L+ Q +F ++ P + +R +L I+ +LDC + D L ++++ T G
Sbjct: 399 LLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFT-DLDL-QHVAKETGG 456
Query: 149 FERHDLTCLVRLSVKNKMLKQGINKRD---LQKEDFQQIYDDL--QSRYSDQLDAPSVPN 203
F D T LV ++ +++ +Q I+ R+ L DFQ+ S S L P +
Sbjct: 457 FVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPR--D 514
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVAT 256
+ W+ IGGL +++ ++ T + + L +R+G+LLYGPPGTGKTL+A +A
Sbjct: 515 LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIAR 574
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E RMNF++VKGPELL+KYIG SE+ +R++F++A++A PC++FFDE +S+APRRG ++ +
Sbjct: 575 ESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDN--T 632
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
GV DRVV+QLL ++DGV Q V++L AT+R DL+DPA+LRPGRLDK +Y D++S+
Sbjct: 633 GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPP-PDQVSR 691
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA 430
L +L + L+DDV L V +GAD+ ++ NA A+ ++ S+
Sbjct: 692 LEILNVLSDSLPLADDVDLQH-VASVTDSFTGADLKALLYNAQLEALHGMLLSS 744
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 566 (204.3 bits), Expect = 9.5e-55, P = 9.5e-55
Identities = 119/236 (50%), Positives = 157/236 (66%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNVSW DIGGL +K E+ T + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVSWNDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG--Q 311
+A EC+ NF++VKGPELL + G+SE N+R +F KAR +APCV+FFDELDS+A +RG
Sbjct: 534 IANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGGGS 593
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G DRV++QLL EMDG++ + VFI+GATNR D++D A+LRPGRLD+ +Y+ L
Sbjct: 594 GGDGGGAADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDSALLRPGRLDQLIYIPL-P 652
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
D S+L + KA +RK ++ DV + +L + SGADI IC A AIR I
Sbjct: 653 DEDSRLNIFKAALRKSPIAKDVDIGALAK-YTQGFSGADITEICQRACKYAIRENI 707
Score = 420 (152.9 bits), Expect = 1.6e-38, P = 1.6e-38
Identities = 92/235 (39%), Positives = 144/235 (61%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTL 249
D + +V ++D+GG+ K A+I + ++ G+K G+LLYGPPG+GKTL
Sbjct: 197 DEERLDDVGYDDVGGVRKQMAQIRELVELPLRHPQLFKSIGVKPPKGILLYGPPGSGKTL 256
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 257 IARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 316
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E + V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + +G+
Sbjct: 317 --EKTNGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDIGV 374
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D I +L VL+ + KL++DV L+ + + GAD+ ++C+ A + IR
Sbjct: 375 -PDEIGRLEVLRIHTKNMKLAEDVDLERISKDTHGYV-GADLAALCTEAALQCIR 427
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 564 (203.6 bits), Expect = 1.5e-54, P = 1.5e-54
Identities = 117/235 (49%), Positives = 159/235 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSIKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ S++ +LKA +RK ++ DV +D L + SGAD+ IC A AIR I
Sbjct: 651 K-SRMAILKANLRKSPVAKDVDVDFLAK-MTNGFSGADLTEICQRACKLAIRESI 703
Score = 441 (160.3 bits), Expect = 8.5e-41, P = 8.5e-41
Identities = 108/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KLSDDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 STGRLEILQIHTKNMKLSDDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>UNIPROTKB|O43933 [details] [associations]
symbol:PEX1 "Peroxisome biogenesis factor 1" species:9606
"Homo sapiens" [GO:0016558 "protein import into peroxisome matrix"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0006625 "protein targeting to peroxisome"
evidence=IMP] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0005777 "peroxisome" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0042623 "ATPase activity, coupled" evidence=IMP]
[GO:0060152 "microtubule-based peroxisome localization"
evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005778
"peroxisomal membrane" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IMP] [GO:0007031 "peroxisome organization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0032403 GO:GO:0005778 EMBL:CH471091
EMBL:CH236949 GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AC007566 GO:GO:0042623
Orphanet:912 EMBL:AC000064 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44
GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12 EMBL:AF030356
EMBL:AF026086 EMBL:AB008112 EMBL:AB052090 EMBL:AB052091
EMBL:AB052092 EMBL:AK292955 EMBL:BC035575 IPI:IPI00411291
RefSeq:NP_000457.1 UniGene:Hs.164682 ProteinModelPortal:O43933
SMR:O43933 IntAct:O43933 STRING:O43933 PhosphoSite:O43933
PaxDb:O43933 PRIDE:O43933 DNASU:5189 Ensembl:ENST00000248633
Ensembl:ENST00000428214 GeneID:5189 KEGG:hsa:5189 UCSC:uc003uly.3
CTD:5189 GeneCards:GC07M092116 HGNC:HGNC:8850 HPA:HPA020235
MIM:214100 MIM:601539 MIM:602136 neXtProt:NX_O43933
PharmGKB:PA33192 HOVERGEN:HBG008169 InParanoid:O43933 OMA:HSWEKEK
PhylomeDB:O43933 GenomeRNAi:5189 NextBio:20068 ArrayExpress:O43933
Bgee:O43933 CleanEx:HS_PEX1 Genevestigator:O43933
GermOnline:ENSG00000127980 InterPro:IPR015343 Pfam:PF09263
Uniprot:O43933
Length = 1283
Score = 574 (207.1 bits), Expect = 1.7e-54, P = 1.7e-54
Identities = 136/354 (38%), Positives = 216/354 (61%)
Query: 93 VLIRKQIQKLFLKTINVLPLTEPER-RLL---IQYQLDCLGGDYGFDASLVEYLSSVTSG 148
+L+ Q +F ++ P + +R +L I+ +LDC + D L ++++ T G
Sbjct: 721 LLVSAQGVHIFQCVQHIQPPNQEQRCEILCNVIKNKLDCDINKFT-DLDL-QHVAKETGG 778
Query: 149 FERHDLTCLVRLSVKNKMLKQGINKRD---LQKEDFQQIYDDL--QSRYSDQLDAPSVPN 203
F D T LV ++ +++ +Q I+ R+ L DFQ+ S S L P +
Sbjct: 779 FVARDFTVLVDRAIHSRLSRQSISTREKLVLTTLDFQKALRGFLPASLRSVNLHKPR--D 836
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVAT 256
+ W+ IGGL +++ ++ T + + L +R+G+LLYGPPGTGKTL+A +A
Sbjct: 837 LGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTGILLYGPPGTGKTLLAGVIAR 896
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E RMNF++VKGPELL+KYIG SE+ +R++F++A++A PC++FFDE +S+APRRG ++ +
Sbjct: 897 ESRMNFISVKGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDN--T 954
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
GV DRVV+QLL ++DGV Q V++L AT+R DL+DPA+LRPGRLDK +Y D++S+
Sbjct: 955 GVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPP-PDQVSR 1013
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSA 430
L +L + L+DDV L V +GAD+ ++ NA A+ ++ S+
Sbjct: 1014 LEILNVLSDSLPLADDVDLQH-VASVTDSFTGADLKALLYNAQLEALHGMLLSS 1066
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 561 (202.5 bits), Expect = 2.6e-54, P = 2.6e-54
Identities = 118/235 (50%), Positives = 160/235 (68%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVN-----RTSGLKRS-GLLLYGPPGTGKTLIAKA 253
VP +WEDIGGL +K E+ T + V R G++ S G+L YGPPG GKTL+AKA
Sbjct: 469 VPTTTWEDIGGLEGVKRELRETVQYPVEHPEKFRKFGMQPSKGVLFYGPPGCGKTLLAKA 528
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ-E 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG +
Sbjct: 529 IANECQANFISIKGPELLTMWFGESEANVRELFDKARQAAPCVLFFDELDSIARSRGSSQ 588
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++Q+L EMDG++ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L D
Sbjct: 589 GDAGGAGDRVINQILTEMDGMNAKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PD 647
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S++ +LKA + K ++ DV L+ L SGAD+ IC A AIR I
Sbjct: 648 LPSRVAILKACLNKSPVAKDVDLEFLGQKTQG-FSGADLTEICQRACKLAIRESI 701
Score = 400 (145.9 bits), Expect = 2.3e-36, P = 2.3e-36
Identities = 96/280 (34%), Positives = 156/280 (55%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTL 249
D + V ++DIGG+ K +I + + G+K G+LLYGPPG GKT+
Sbjct: 192 DEDRLDEVGYDDIGGVRKQLGQIRELVELPLRHPQLFKNIGVKPPKGILLYGPPGCGKTM 251
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
IA+AVA E F + GPE+++K G+SE N+R F +A AP ++F DE+DS+AP+R
Sbjct: 252 IARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPSIIFIDEIDSIAPKR 311
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E V R+VSQLL MDG+ + V ++GATNR + +DPA+ R GR D+ + + +
Sbjct: 312 --EKTQGEVERRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDPALRRFGRFDREIDITI 369
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---I 426
D +L +++ + KL + V L+++ + + GAD+ ++C+ + + IR +
Sbjct: 370 -PDATGRLEIMRIHTKNMKLDETVDLEAVANETHGYV-GADLAALCTESALQCIREKMDV 427
Query: 427 ITSAPQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
I + SA ++ VT D F A +L+ P ++V
Sbjct: 428 IDLEDETISAEILESMSVTQDHFRTALTLSN-PSALRETV 466
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 562 (202.9 bits), Expect = 3.0e-54, P = 3.0e-54
Identities = 117/234 (50%), Positives = 159/234 (67%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKAV 254
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA+
Sbjct: 477 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 536
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE-D 313
A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 537 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVG 596
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 597 DAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-PDE 655
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+L + KA +RK LS D+ L+ L + SGAD+ IC A AIR I
Sbjct: 656 ASRLQIFKASLRKTPLSADLDLNFLAKNTVG-FSGADLTEICQRACKLAIRESI 708
Score = 397 (144.8 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 97/273 (35%), Positives = 154/273 (56%)
Query: 204 VSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V ++D+GG+ K A+I + + G+K G+LL+GPPGTGKTLIA+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E F + GPE+++K G+SE N+R F + +P ++F DE+D++AP+R E
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR--EKAHG 323
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V R+VSQLL MDG+ T V ++ ATNR + +D A+ R GR D+ + +G+ D + +
Sbjct: 324 EVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGI-PDAVGR 382
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQV 433
L +L+ + KL +DV L+ + + + GAD+ S+CS A + IR +I
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFV-GADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 434 KSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
A V+ VTM++F A ++P ++V
Sbjct: 442 IDAEVLNSLAVTMENFRFAMG-KSSPSALREAV 473
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 562 (202.9 bits), Expect = 3.0e-54, P = 3.0e-54
Identities = 117/234 (50%), Positives = 159/234 (67%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKAV 254
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA+
Sbjct: 477 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 536
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE-D 313
A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 537 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGSVG 596
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 597 DAGGAADRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-PDE 655
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+L + KA +RK LS D+ L+ L + SGAD+ IC A AIR I
Sbjct: 656 ASRLQIFKASLRKTPLSADLDLNFLAKNTVG-FSGADLTEICQRACKLAIRESI 708
Score = 397 (144.8 bits), Expect = 5.1e-36, P = 5.1e-36
Identities = 97/273 (35%), Positives = 154/273 (56%)
Query: 204 VSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V ++D+GG+ K A+I + + G+K G+LL+GPPGTGKTLIA+AVA
Sbjct: 206 VGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGVKPPRGILLFGPPGTGKTLIARAVAN 265
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E F + GPE+++K G+SE N+R F + +P ++F DE+D++AP+R E
Sbjct: 266 ETGAFFFLINGPEIMSKMSGESESNLRKAFAECEKNSPAILFIDEIDAIAPKR--EKAHG 323
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V R+VSQLL MDG+ T V ++ ATNR + +D A+ R GR D+ + +G+ D + +
Sbjct: 324 EVEKRIVSQLLTLMDGLKTRAHVVVIAATNRPNSIDGALRRFGRFDREIDIGI-PDAVGR 382
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQV 433
L +L+ + KL +DV L+ + + + GAD+ S+CS A + IR +I
Sbjct: 383 LEILRIHTKNMKLGEDVDLEQVANECHGFV-GADLASLCSEAAIQQIREKMELIDLEDDT 441
Query: 434 KSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
A V+ VTM++F A ++P ++V
Sbjct: 442 IDAEVLNSLAVTMENFRFAMG-KSSPSALREAV 473
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 562 (202.9 bits), Expect = 3.6e-54, P = 3.6e-54
Identities = 121/237 (51%), Positives = 161/237 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNV WEDIGGL ++K ++ + V+ GL S G+L YGPPGTGKT++AKA
Sbjct: 490 VPNVRWEDIGGLDEVKQDLREQVQYPVDHPEKFLKFGLSPSRGVLFYGPPGTGKTMLAKA 549
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
VA EC NF++VKGPELL+ + G+SE NIR++F KAR+AAPC+VF DELDS+A RG
Sbjct: 550 VANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCIVFLDELDSIAKARGGSV 609
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRVV+QLL EMDG+ + ++VF++GATNR + LDPA+ RPGRLD +YV L D
Sbjct: 610 GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDPALCRPGRLDSLIYVPL-PD 668
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ +L +LKA +RK +SDDV L + + SGAD+ I A AI+ IT+
Sbjct: 669 ELGRLSILKAQLRKTPVSDDVDLQYIANKTHG-FSGADLGFITQRAVKIAIKESITA 724
Score = 410 (149.4 bits), Expect = 2.1e-37, P = 2.1e-37
Identities = 117/359 (32%), Positives = 190/359 (52%)
Query: 106 TINVLPLTEPERRLLIQYQLDCLGGDYG--FDASLVEYLSSVTSGFERHDLTCLVR---L 160
TI+ P + +R+ + D + G G FD L Y + D+ LVR
Sbjct: 119 TIHPCPDIKYAKRIAVLPIADTVEGLTGSLFDVFLAPYFREAYRPVRQGDIF-LVRGGMR 177
Query: 161 SVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEIL 220
V+ K+++ + + +D I+ + + D+ + ++ V ++DIGG K A+I
Sbjct: 178 QVEFKVVEVDPPEYGIVAQD-TVIHCEGEPIQRDE-EENNLNEVGYDDIGGCRKQMAQIR 235
Query: 221 STFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNK 273
+ ++ G+K G+LLYGPPGTGKTL+A+AVA E F + GPE+++K
Sbjct: 236 EMVELPLRHPQLFKSIGIKPPRGVLLYGPPGTGKTLMARAVANETGAFFFLINGPEIMSK 295
Query: 274 YIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
G+SE N+R F +A +P ++F DE+DS+AP+R E + V RVVSQLL MDG+
Sbjct: 296 MAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVERRVVSQLLTLMDGM 353
Query: 334 HTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDV 393
+V ++ ATNR + +DPA+ R GR D+ + +G+ D +L +L+ + KL DDV
Sbjct: 354 KARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTGRLEILQIHTKNMKLGDDV 412
Query: 394 SLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI----VTMDDF 445
L+ + + G+D+ ++CS A + IR +I A V+ VTM++F
Sbjct: 413 DLEQIAAETHGYV-GSDVAALCSEAAMQQIREKMDLIDLDEDTIDAEVLDSLGVTMENF 470
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 560 (202.2 bits), Expect = 4.8e-54, P = 4.8e-54
Identities = 119/239 (49%), Positives = 161/239 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP V+WEDIGGL +K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 471 VPQVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAKA 530
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
+A EC+ NF+++KGPELL + G+SE N+R +F KAR AAPCV+FFDELDS+A RG
Sbjct: 531 IANECQANFISIKGPELLTMWFGESEANVREIFDKARQAAPCVLFFDELDSIAKARGGNI 590
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG+ T ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L ++
Sbjct: 591 GDGGGAADRVINQILTEMDGMSTKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPLPDE 650
Query: 373 RISQLGVLKAVVRKFKLSD--DVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S++ +LKA +RK ++ DV L+ L + SGAD+ IC A AIR I S
Sbjct: 651 K-SRVAILKANLRKSPVAKAGDVDLEFLAK-MTNGFSGADLTEICQRACKLAIRESIES 707
Score = 438 (159.2 bits), Expect = 1.8e-40, P = 1.8e-40
Identities = 107/277 (38%), Positives = 159/277 (57%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + + G+K G+LLYGPPGTGKTLIA+
Sbjct: 197 SLNEVGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLIAR 256
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 257 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 314
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +DPA+ R GR D+ + +G+ D
Sbjct: 315 KTHGEVERRIVSQLLTLMDGLKQRAHVIVMAATNRPNSIDPALRRFGRFDREVDIGI-PD 373
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KL+DDV L+ + + + GAD+ ++CS A +AIR+ +I
Sbjct: 374 ATGRLEILQIHTKNMKLADDVDLEQVANETHGHV-GADLAALCSEAALQAIRKKMDLIDL 432
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
+ A V+ VTMDDF A S + P ++V
Sbjct: 433 EDETIDAEVMNSLAVTMDDFRWALSQSN-PSALRETV 468
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 555 (200.4 bits), Expect = 1.8e-53, P = 1.8e-53
Identities = 122/255 (47%), Positives = 166/255 (65%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VP+V+WEDIGGL ++K E+ + V G+ S G+L YGPPG GKTL+AKA
Sbjct: 473 VPHVNWEDIGGLDEVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKA 532
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ-E 312
+A EC+ NF+++KGPELL + G+SE N+R+VF KAR AAPC++FFDELDS+A RG
Sbjct: 533 IANECQANFVSIKGPELLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKARGGGA 592
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRV++Q+L EMDG+ ++VFI+GATNR D++DPAILRPGRLD+ +Y+ L D
Sbjct: 593 GDAGGAADRVINQILTEMDGMTNKKNVFIIGATNRPDIIDPAILRPGRLDQLIYIPL-PD 651
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS--- 429
S+ +L+A +RK ++ DV L L SGAD+ IC A AIR I +
Sbjct: 652 MPSRTAILRANLRKSPVAKDVDLMYL-SKITEGFSGADLTEICQRACKLAIREAIEAEIR 710
Query: 430 APQVKSAPVIVTMDD 444
A + + A MDD
Sbjct: 711 AERQRQARKETAMDD 725
Score = 417 (151.9 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 103/277 (37%), Positives = 157/277 (56%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ ++ ++DIGG K A+I + + G+K G+LLYGPPGTGKTL+A+
Sbjct: 199 SLNDIGYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLVAR 258
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A AP ++F DELD++AP+R E
Sbjct: 259 AVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAPAIIFIDELDAIAPKR--E 316
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
V R+VSQLL MDG+ V ++ ATNR + +D A+ R GR D+ + +G+ D
Sbjct: 317 KTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDAALRRFGRFDREIDIGI-PD 375
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITS 429
+L +L+ + KLS+DV L+ + + GAD+ ++CS A +AIR+ +I
Sbjct: 376 STGRLEILQIHTKNMKLSEDVDLEQISAETHGHV-GADLAALCSEAALQAIRKKMTLIDL 434
Query: 430 APQVKSAPVI----VTMDDFLGACSLATAPDKFSQSV 462
A ++ VTMDDF A S + P ++V
Sbjct: 435 EDDSIDADLLNSLAVTMDDFKWALSQSN-PSALRETV 470
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 554 (200.1 bits), Expect = 2.5e-53, P = 2.5e-53
Identities = 117/235 (49%), Positives = 157/235 (66%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKAV 254
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA+
Sbjct: 478 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 537
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG--QE 312
A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 538 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAG 597
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 598 GDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-PD 656
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ +LKA +RK LS D+ L L + SGAD+ IC A AIR I
Sbjct: 657 EASRHQILKASLRKTPLSKDLDLTFLAKNTVG-FSGADLTEICQRACKLAIRESI 710
Score = 395 (144.1 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 87/232 (37%), Positives = 140/232 (60%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ ++ ++D+GG+ K A+I + + G+K G+LL+GPPGTGKTLIA+
Sbjct: 203 SMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR 262
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F + P ++F DE+D++AP+R E
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--E 320
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ V R+VSQLL MDGV ++ ++ ATNR + +D A+ R GR D+ + +G+ D
Sbjct: 321 KTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGI-PD 379
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ +L +L+ + KL+DDV L+ + + + GAD+ S+CS A + IR
Sbjct: 380 AVGRLEILRIHTKNMKLADDVDLEQIANECHGFV-GADLASLCSEAALQQIR 430
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 554 (200.1 bits), Expect = 2.5e-53, P = 2.5e-53
Identities = 117/235 (49%), Positives = 157/235 (66%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKAV 254
PN +W DIGGL +K E+ + V G++ S G+L YGPPG GKTL+AKA+
Sbjct: 478 PNTTWSDIGGLQNVKRELQELVQYPVEHPEKYLKFGMQPSRGVLFYGPPGCGKTLLAKAI 537
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG--QE 312
A EC+ NF+++KGPELL + G+SE N+R+VF KAR+AAPCV+FFDELDS+A RG
Sbjct: 538 ANECQANFISIKGPELLTMWFGESEANVRDVFDKARAAAPCVLFFDELDSIAKARGGGAG 597
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
G DRV++Q+L EMDG++ ++VFI+GATNR D++DPA+LRPGRLD+ +Y+ L D
Sbjct: 598 GDGGGASDRVINQVLTEMDGMNAKKNVFIIGATNRPDIIDPAVLRPGRLDQLIYIPL-PD 656
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
S+ +LKA +RK LS D+ L L + SGAD+ IC A AIR I
Sbjct: 657 EASRHQILKASLRKTPLSKDLDLTFLAKNTVG-FSGADLTEICQRACKLAIRESI 710
Score = 395 (144.1 bits), Expect = 8.4e-36, P = 8.4e-36
Identities = 87/232 (37%), Positives = 140/232 (60%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S+ ++ ++D+GG+ K A+I + + G+K G+LL+GPPGTGKTLIA+
Sbjct: 203 SMNDIGYDDLGGVRKQLAQIKEMVELPLRHPQLFKAIGIKPPRGILLFGPPGTGKTLIAR 262
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F + P ++F DE+D++AP+R E
Sbjct: 263 AVANETGSFFFLINGPEVMSKMSGESESNLRKAFEECEKNQPAILFIDEIDAIAPKR--E 320
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ V R+VSQLL MDGV ++ ++ ATNR + +D A+ R GR D+ + +G+ D
Sbjct: 321 KTNGEVERRIVSQLLTLMDGVKGRSNLVVIAATNRPNSIDGALRRFGRFDREIDIGI-PD 379
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ +L +L+ + KL+DDV L+ + + + GAD+ S+CS A + IR
Sbjct: 380 AVGRLEILRIHTKNMKLADDVDLEQIANECHGFV-GADLASLCSEAALQQIR 430
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 551 (199.0 bits), Expect = 6.9e-53, P = 6.9e-53
Identities = 121/240 (50%), Positives = 165/240 (68%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNV WEDIGGL ++K E++ + + V+ GL S G+L YGPPGTGKT++AKA
Sbjct: 493 VPNVRWEDIGGLEEVKRELIESVQYPVDHPEKFQKFGLSPSRGVLFYGPPGTGKTMLAKA 552
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
VA EC NF++VKGPELL+ + G+SE NIR++F KAR+AAPCVVF DELDS+A RG
Sbjct: 553 VANECAANFISVKGPELLSMWFGESESNIRDIFDKARAAAPCVVFLDELDSIAKSRGGSV 612
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ G DRVV+QLL EMDG+ + ++VF++GATNR + LD A++RPGRLD +YV L D
Sbjct: 613 GDAGGASDRVVNQLLTEMDGMTSKKNVFVIGATNRPEQLDAALVRPGRLDTLVYVPL-PD 671
Query: 373 RISQLGVLKAVVRKFKLSDDVSLD---SLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ S+ G+LKA +RK ++ DV ++ S H F SGAD+ + A AI+ I++
Sbjct: 672 QASREGILKAQLRKTPVASDVDIEFIASKTHGF----SGADLGFVTQRAVKLAIKESISA 727
Score = 403 (146.9 bits), Expect = 1.2e-36, P = 1.2e-36
Identities = 96/256 (37%), Positives = 148/256 (57%)
Query: 204 VSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V ++DIGG K A+I + ++ G+K G+L+YGPPGTGKTL+A+AVA
Sbjct: 222 VGYDDIGGCRKQMAQIRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVAN 281
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E F + GPE+++K G+SE N+R F +A +P ++F DE+DS+AP+R E +
Sbjct: 282 ETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNG 339
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V RVVSQLL MDG+ +V ++ ATNR + +DPA+ R GR D+ + +G+ D +
Sbjct: 340 EVERRVVSQLLTLMDGMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDIGI-PDPTGR 398
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQV 433
L +L + KL +DV L+++ + G+D+ S+CS A + IR +I
Sbjct: 399 LEILSIHTKNMKLGEDVDLETIAAETHGYV-GSDLASLCSEAAMQQIREKMDLIDLDEDT 457
Query: 434 KSAPVI----VTMDDF 445
A V+ VTM++F
Sbjct: 458 IDAEVLDSLGVTMENF 473
>TAIR|locus:2159557 [details] [associations]
symbol:PEX1 "peroxisome 1" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISM] [GO:0007031 "peroxisome organization"
evidence=IEA;RCA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA;IMP]
[GO:0016558 "protein import into peroxisome matrix"
evidence=RCA;IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0005778 GO:GO:0006635 GO:GO:0016558
HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 EMBL:AB006697 EMBL:AF275382 IPI:IPI00541072
RefSeq:NP_196464.2 UniGene:At.8759 ProteinModelPortal:Q9FNP1
SMR:Q9FNP1 STRING:Q9FNP1 PaxDb:Q9FNP1 PRIDE:Q9FNP1
EnsemblPlants:AT5G08470.1 GeneID:830746 KEGG:ath:AT5G08470
TAIR:At5g08470 HOGENOM:HOG000030785 InParanoid:Q9FQ60 KO:K13338
OMA:AECISLP PhylomeDB:Q9FNP1 Genevestigator:Q9FNP1
PANTHER:PTHR23077:SF12 Uniprot:Q9FNP1
Length = 1130
Score = 556 (200.8 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 137/361 (37%), Positives = 209/361 (57%)
Query: 111 PLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSV-----KNK 165
P T ER ++++++ D D L L++ G++ +DL LV +V ++
Sbjct: 744 PATS-ERGAILKHEIQKRLLDCSEDILL--NLAAKCEGYDAYDLEILVDRAVHAAIGRHL 800
Query: 166 MLKQGINKRDLQKEDFQQ-IYDDLQSRYSDQLDAPSVPN-VSWEDIGGLSKLK------A 217
L+ I+K +L KEDF + ++D + D + S + WED+GG++ +K
Sbjct: 801 PLESNISKYNLVKEDFTRAMHDFVPVAMRDITKSASEGGRLGWEDVGGVTDIKNAIKEMI 860
Query: 218 EILSTFRGVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIG 276
E+ S F + S L+ RS +LLYGPPG GKT I A A C + F++VKGPELLNKYIG
Sbjct: 861 ELPSKFPKIFAKSPLRLRSNVLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIG 920
Query: 277 QSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTS 336
SE+ +R++F KA +AAPC++FFDE DS+AP+RG ++ +GV DRVV+Q L E+DGV
Sbjct: 921 ASEQAVRDIFSKAAAAAPCILFFDEFDSIAPKRGHDN--TGVTDRVVNQFLTELDGVEVL 978
Query: 337 QDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLD 396
VF+ AT+R DLLDPA+LRPGRLD+ L + +L +L + RK ++DD+ L+
Sbjct: 979 TGVFVFAATSRPDLLDPALLRPGRLDRLLLCD-FPSPPERLEILTVLSRKLLMADDIDLE 1037
Query: 397 SLVHHFPSQMSGADIYSICSNAWTRAIRRIIT--SAPQVKSAPVIVTMDDFLGACSLATA 454
+ SGAD+ ++ S+A A+ + P+ + P+I D L + + T
Sbjct: 1038 PIAL-MTEGFSGADLQALLSDAQLAAVHEYLNREDKPETGTTPIIT--DPLLKSIASKTK 1094
Query: 455 P 455
P
Sbjct: 1095 P 1095
>UNIPROTKB|E2RLT2 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307 RefSeq:XP_532459.1
ProteinModelPortal:E2RLT2 Ensembl:ENSCAFT00000003132 GeneID:475227
KEGG:cfa:475227 NextBio:20851103 Uniprot:E2RLT2
Length = 1267
Score = 545 (196.9 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 126/325 (38%), Positives = 197/325 (60%)
Query: 120 LIQYQLDCLGGDYGFDASL-VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--- 175
+I+ +LDC D +L ++ ++ T GF D T LV ++ + + Q I R+
Sbjct: 736 VIKNKLDC---DINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSHQRITTREELV 792
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL--- 232
L DFQ+ ++ ++ W+ IGGL +++ + T + + L
Sbjct: 793 LTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFAN 852
Query: 233 ----KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
+R G+LLYGPPGTGKTL+A +A E MNF++VKGPELL+KYIG SE+ +R++F++
Sbjct: 853 LPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIR 912
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRV 348
A++A PC++FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R
Sbjct: 913 AQAAKPCILFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRP 970
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
DL+DPA+LRPGRLDK +Y D++S+L +L + L+DDV L V + +G
Sbjct: 971 DLIDPALLRPGRLDKCVYCPP-PDQVSRLEILNVLSDSLPLADDVDLQH-VASVTNSFTG 1028
Query: 409 ADIYSICSNAWTRAIR-RIITSAPQ 432
AD+ ++ NA A+ R+++ Q
Sbjct: 1029 ADLKALLYNAQLEAVHGRLLSCGLQ 1053
Score = 41 (19.5 bits), Expect = 1.0e-52, Sum P(2) = 1.0e-52
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 106 TINVL--PLTEPERRLLIQY-----QLDCLGGDYGFDASLVEYLS 143
TI VL P+ + E I + +L+CLGG S +E+++
Sbjct: 511 TIQVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSLEHIT 555
>MGI|MGI:1914709 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10090 "Mus musculus"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914709
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
CTD:4931 HOVERGEN:HBG001226 OMA:NDMTLKE OrthoDB:EOG4ZPDTN
EMBL:AK004676 EMBL:AK054502 EMBL:AK140509 EMBL:BC031847
IPI:IPI00321884 RefSeq:NP_080447.1 UniGene:Mm.263464 PDB:2RRE
PDBsum:2RRE ProteinModelPortal:Q9DBY8 SMR:Q9DBY8 STRING:Q9DBY8
PhosphoSite:Q9DBY8 PaxDb:Q9DBY8 PRIDE:Q9DBY8
Ensembl:ENSMUST00000027797 GeneID:67459 KEGG:mmu:67459
UCSC:uc007dxb.1 GeneTree:ENSGT00570000079239 InParanoid:Q9DBY8
EvolutionaryTrace:Q9DBY8 NextBio:324638 Bgee:Q9DBY8 CleanEx:MM_NVL
Genevestigator:Q9DBY8 GermOnline:ENSMUSG00000026516 Uniprot:Q9DBY8
Length = 855
Score = 550 (198.7 bits), Expect = 1.3e-52, P = 1.3e-52
Identities = 120/240 (50%), Positives = 166/240 (69%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R + RT GL +G+LL GPPG GKTL+AK
Sbjct: 573 TVPNVTWADIGALEDIRDELIMAILAPVRNPDQFRTLGLGTPAGILLAGPPGCGKTLLAK 632
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 633 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 690
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE- 371
D+ +G RVV+QLL EMDG+ T Q VFIL ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 691 DRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 372 -DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRRIITS 429
DR++ L + K L +DV+L+++ + +GAD+ ++ A A+R+ IT+
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVNLETIANDLRCNCYTGADLTALVREASLCALRQEITA 810
Score = 379 (138.5 bits), Expect = 5.2e-34, P = 5.2e-34
Identities = 100/282 (35%), Positives = 161/282 (57%)
Query: 172 NKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGL-SKLK--AEILSTFR 224
NKR + E+ Q++ ++++ + A S + NV +ED+GG + LK ++L R
Sbjct: 227 NKR--KTENLQEVDGEIEALLQKKAKARSTELQISNVKFEDVGGNDATLKEVCKMLIHMR 284
Query: 225 G--VNRTSGL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEEN 281
V + G+ G+LL+GPPG GKTL+A A+A E + L V PE+++ G+SE+
Sbjct: 285 HPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQK 344
Query: 282 IRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD---GVHTSQD 338
+R +F +A S APC+VF DE+D++ P+R E S + R+V+QLL MD V +
Sbjct: 345 LRELFDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATAR 402
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++GATNR D LDPA+ R GR D+ + +G+ D ++ +L+ + RK +L + + L
Sbjct: 403 VLVIGATNRPDSLDPALRRAGRFDREVCLGI-PDEAARERILQTLCRKLRLPETFNFCHL 461
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRIITSAP-QVKSAPVI 439
H P + GAD+ ++C A A+ R++ Q K P I
Sbjct: 462 AHLTPGFV-GADLMALCREAAMCAVNRVLMKQQAQQKKKPEI 502
>UNIPROTKB|H0Y8B6 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
Ensembl:ENST00000469968 Uniprot:H0Y8B6
Length = 739
Score = 524 (189.5 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 113/237 (47%), Positives = 159/237 (67%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGL---KRSGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R ++ L +G+LL GPPG GKTL+AK
Sbjct: 457 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 516
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 517 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 574
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 575 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 633
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + K L DV+L+++ +GAD+ ++ A A+R+
Sbjct: 634 PADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 690
Score = 383 (139.9 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 101/289 (34%), Positives = 159/289 (55%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGLSKLKAE 218
K K+ +G +KR +KED Q++ ++++ + A + NV +ED+GG E
Sbjct: 103 KGKLKNKG-SKR--KKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKE 159
Query: 219 I---LSTFRG--VNRTSGL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
+ L R V G+ G+LL+GPPG GKTL+A A+A E + L V PE+++
Sbjct: 160 VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 219
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD- 331
G+SE+ +R +F +A S APC++F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 220 GVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 277
Query: 332 --GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 278 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 336
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAP-QVKSAP 437
L H P + GAD+ ++C A A+ R++ Q K P
Sbjct: 337 PQAFDFCHLAHLTPGFV-GADLMALCREAAMCAVNRVLMKLQEQQKKNP 384
Score = 38 (18.4 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 141 YLSSVTSGFERHDLTCLVR---LSVKNKMLK--QGINKRDLQKED 180
+L+ +T GF DL L R + N++L Q K++ + ED
Sbjct: 344 HLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMED 388
>UNIPROTKB|E7ERY0 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI00946072 ProteinModelPortal:E7ERY0 SMR:E7ERY0
Ensembl:ENST00000482491 ArrayExpress:E7ERY0 Bgee:E7ERY0
Uniprot:E7ERY0
Length = 580
Score = 524 (189.5 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 113/237 (47%), Positives = 159/237 (67%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGL---KRSGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R ++ L +G+LL GPPG GKTL+AK
Sbjct: 298 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 357
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 358 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 415
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 416 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 474
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + K L DV+L+++ +GAD+ ++ A A+R+
Sbjct: 475 PADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 531
Score = 282 (104.3 bits), Expect = 4.7e-22, P = 4.7e-22
Identities = 71/213 (33%), Positives = 116/213 (54%)
Query: 231 GLKRSGLLL--YGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
GL+ +G ++ Y G + + + E + L V PE+++ G+SE+ +R +F +
Sbjct: 17 GLECNGAIMAHYSLNFPGSSGPPTSASRELDLPILKVAAPEIVSGVSGESEQKLRELFEQ 76
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD---GVHTSQDVFILGAT 345
A S APC++F DE+D++ P+R E S + R+V+QLL MD V + V ++GAT
Sbjct: 77 AVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDDLNNVAATARVLVIGAT 134
Query: 346 NRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ 405
NR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L L H P
Sbjct: 135 NRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRLPQAFDFCHLAHLTPGF 193
Query: 406 MSGADIYSICSNAWTRAIRRIITSAP-QVKSAP 437
+ GAD+ ++C A A+ R++ Q K P
Sbjct: 194 V-GADLMALCREAAMCAVNRVLMKLQEQQKKNP 225
Score = 38 (18.4 bits), Expect = 1.4e-52, Sum P(2) = 1.4e-52
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 141 YLSSVTSGFERHDLTCLVR---LSVKNKMLK--QGINKRDLQKED 180
+L+ +T GF DL L R + N++L Q K++ + ED
Sbjct: 185 HLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMED 229
>UNIPROTKB|E2RCK9 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005509 "calcium ion
binding" evidence=IEA] InterPro:IPR001125 InterPro:IPR002048
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR011992 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 Pfam:PF13499 PRINTS:PR00450
PROSITE:PS00674 PROSITE:PS50222 SMART:SM00054 SMART:SM00382
Prosite:PS00018 GO:GO:0005524 GO:GO:0005509 Gene3D:1.10.238.10
InterPro:IPR018247 GO:GO:0005778 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0006625
PANTHER:PTHR23077:SF12 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AAEX03009307
Ensembl:ENSCAFT00000038397 Uniprot:E2RCK9
Length = 1416
Score = 545 (196.9 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 126/325 (38%), Positives = 197/325 (60%)
Query: 120 LIQYQLDCLGGDYGFDASL-VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--- 175
+I+ +LDC D +L ++ ++ T GF D T LV ++ + + Q I R+
Sbjct: 885 VIKNKLDC---DINRFTNLDLKRIAKETEGFVARDFTVLVDRAIHSHLSHQRITTREELV 941
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL--- 232
L DFQ+ ++ ++ W+ IGGL +++ + T + + L
Sbjct: 942 LTTLDFQKALQGFIPASLRNVNLHKPRDLGWDKIGGLHEVRQILWDTIQLPAKYPELFAN 1001
Query: 233 ----KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
+R G+LLYGPPGTGKTL+A +A E MNF++VKGPELL+KYIG SE+ +R++F++
Sbjct: 1002 LPIRQRMGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDIFIR 1061
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRV 348
A++A PC++FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R
Sbjct: 1062 AQAAKPCILFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRP 1119
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
DL+DPA+LRPGRLDK +Y D++S+L +L + L+DDV L V + +G
Sbjct: 1120 DLIDPALLRPGRLDKCVYCPP-PDQVSRLEILNVLSDSLPLADDVDLQH-VASVTNSFTG 1177
Query: 409 ADIYSICSNAWTRAIR-RIITSAPQ 432
AD+ ++ NA A+ R+++ Q
Sbjct: 1178 ADLKALLYNAQLEAVHGRLLSCGLQ 1202
Score = 41 (19.5 bits), Expect = 1.7e-52, Sum P(2) = 1.7e-52
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 106 TINVL--PLTEPERRLLIQY-----QLDCLGGDYGFDASLVEYLS 143
TI VL P+ + E I + +L+CLGG S +E+++
Sbjct: 660 TIQVLLDPMVKEENSEEIDFILPFLKLNCLGGVNSLGVSSLEHIT 704
>SGD|S000001680 [details] [associations]
symbol:PEX1 "AAA-peroxin" species:4932 "Saccharomyces
cerevisiae" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042623
"ATPase activity, coupled" evidence=IEA] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA;IDA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IMP;IPI] [GO:0005777
"peroxisome" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=ISS;IMP] [GO:0016562 "protein import into peroxisome
matrix, receptor recycling" evidence=IGI;IDA;IMP] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
SGD:S000001680 GO:GO:0005524 EMBL:BK006944 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12
GeneTree:ENSGT00550000075032 OrthoDB:EOG4TQQJ3 EMBL:M58676
EMBL:Z28197 PIR:S38034 RefSeq:NP_012724.1 ProteinModelPortal:P24004
SMR:P24004 DIP:DIP-4266N IntAct:P24004 MINT:MINT-483826
STRING:P24004 PaxDb:P24004 EnsemblFungi:YKL197C GeneID:853636
KEGG:sce:YKL197C CYGD:YKL197c HOGENOM:HOG000163138 OMA:SAVAQQC
NextBio:974520 Genevestigator:P24004 GermOnline:YKL197C
Uniprot:P24004
Length = 1043
Score = 520 (188.1 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 111/251 (44%), Positives = 161/251 (64%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
N+ W DIG L+ K +L T + + RSG+LLYG PG GKTL+A AVA
Sbjct: 693 NIKWGDIGALANAKDVLLETLEWPTKYEPIFVNCPLRLRSGILLYGYPGCGKTLLASAVA 752
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+C +NF++VKGPE+LNK+IG SE+NIR +F +A+S PC++FFDE DS+AP+RG + S
Sbjct: 753 QQCGLNFISVKGPEILNKFIGASEQNIRELFERAQSVKPCILFFDEFDSIAPKRGHD--S 810
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+GV DRVV+QLL +MDG V+IL AT+R DL+D A+LRPGRLDKS+ + +
Sbjct: 811 TGVTDRVVNQLLTQMDGAEGLDGVYILAATSRPDLIDSALLRPGRLDKSVICNIPTES-E 869
Query: 376 QLGVLKAVV---------RKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+L +L+A+V +KF L + L L+ + SGAD+ +C NA+ +++ R
Sbjct: 870 RLDILQAIVNSKDKDTGQKKFALEKNADL-KLIAEKTAGFSGADLQGLCYNAYLKSVHRW 928
Query: 427 ITSAPQVKSAP 437
+++A Q + P
Sbjct: 929 LSAADQSEVVP 939
Score = 41 (19.5 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 428 TSAPQVKSAPVIVTMDDFLGACSLATAP 455
TS +VT++D L AC T P
Sbjct: 976 TSTSAASELTAVVTINDLLEACQ-ETKP 1002
Score = 40 (19.1 bits), Expect = 1.8e-52, Sum P(3) = 1.8e-52
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 168 KQGINKRDLQKEDFQQIYDD--LQSRYSD 194
KQGI K L KE ++ D + +Y+D
Sbjct: 462 KQGIGKTRLLKELINEVEKDHHIFVKYAD 490
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 538 (194.4 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 107/264 (40%), Positives = 173/264 (65%)
Query: 171 INKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILST------FR 224
+NK ++ + FQ + + + S + +P V+W DIGG++++K ++ T ++
Sbjct: 899 LNKLTIKAKHFQHALN-ICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYK 957
Query: 225 GV-NRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIR 283
+ N+ + G+LLYGPPG GKTL+AKA+A EC+ NF++VKGPELL + G+SE N+R
Sbjct: 958 HLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVR 1017
Query: 284 NVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILG 343
++F KAR+A+PC++FFDE+DSLA R + ++ DRV++Q+L E+DG++ + +FI+
Sbjct: 1018 DLFDKARAASPCIIFFDEIDSLAKERNS-NTNNDASDRVINQILTEIDGINEKKTIFIIA 1076
Query: 344 ATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFP 403
ATNR D+LD A+ RPGRLDK +Y+ L D S+ + KA+++ L++DV + +
Sbjct: 1077 ATNRPDILDKALTRPGRLDKLIYISL-PDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTE 1135
Query: 404 SQMSGADIYSICSNAWTRAIRRII 427
SGADI ++C +A AI+ I
Sbjct: 1136 G-FSGADITNLCQSAVNEAIKETI 1158
Score = 371 (135.7 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 81/232 (34%), Positives = 139/232 (59%)
Query: 203 NVSWEDIGG----LSKLKA--EILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAVA 255
++++ED+GG L+K++ E+ + + + G+ G+L++G PGTGKT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
E + GPE+++K+IG+SE+ +R +F KA PC++F DE+DS+A +R + +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ RVVSQLL MDG+ + +V +L ATNR + +DPA+ R GR D+ + + + +++
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ-G 699
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ +L +K KL DV+L + + GAD+ +C A + I+ I
Sbjct: 700 RYEILLTKTKKMKLDPDVNLRKIAKECHGYV-GADLAQLCFEAAIQCIKEHI 750
Score = 43 (20.2 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 3 YIESFHNRINEDILSHLLTNYFATPRYHHL-NDIV 36
YI N+ ++D + +L Y + H L NDI+
Sbjct: 208 YINKVENKQSDDKIKNLNNKYIKKFKSHILQNDIL 242
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 538 (194.4 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 107/264 (40%), Positives = 173/264 (65%)
Query: 171 INKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILST------FR 224
+NK ++ + FQ + + + S + +P V+W DIGG++++K ++ T ++
Sbjct: 899 LNKLTIKAKHFQHALN-ICNPSSLRERQVQIPTVTWNDIGGMNEVKEQLKETILYPLEYK 957
Query: 225 GV-NRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIR 283
+ N+ + G+LLYGPPG GKTL+AKA+A EC+ NF++VKGPELL + G+SE N+R
Sbjct: 958 HLYNKFNSNYNKGILLYGPPGCGKTLLAKAIANECKANFISVKGPELLTMWFGESEANVR 1017
Query: 284 NVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILG 343
++F KAR+A+PC++FFDE+DSLA R + ++ DRV++Q+L E+DG++ + +FI+
Sbjct: 1018 DLFDKARAASPCIIFFDEIDSLAKERNS-NTNNDASDRVINQILTEIDGINEKKTIFIIA 1076
Query: 344 ATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFP 403
ATNR D+LD A+ RPGRLDK +Y+ L D S+ + KA+++ L++DV + +
Sbjct: 1077 ATNRPDILDKALTRPGRLDKLIYISL-PDLKSRYSIFKAILKNTPLNEDVDIHDMAKRTE 1135
Query: 404 SQMSGADIYSICSNAWTRAIRRII 427
SGADI ++C +A AI+ I
Sbjct: 1136 G-FSGADITNLCQSAVNEAIKETI 1158
Score = 371 (135.7 bits), Expect = 2.3e-34, Sum P(2) = 2.3e-34
Identities = 81/232 (34%), Positives = 139/232 (59%)
Query: 203 NVSWEDIGG----LSKLKA--EILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAVA 255
++++ED+GG L+K++ E+ + + + G+ G+L++G PGTGKT IAKA+A
Sbjct: 523 DITYEDLGGMKKQLNKIRELIELPLKYPEIFMSIGISAPKGVLMHGIPGTGKTSIAKAIA 582
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
E + GPE+++K+IG+SE+ +R +F KA PC++F DE+DS+A +R + +
Sbjct: 583 NESNAYCYIINGPEIMSKHIGESEQKLRKIFKKASEKTPCIIFIDEIDSIANKRSKSNNE 642
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ RVVSQLL MDG+ + +V +L ATNR + +DPA+ R GR D+ + + + +++
Sbjct: 643 --LEKRVVSQLLTLMDGLKKNNNVLVLAATNRPNSIDPALRRFGRFDREIEIPVPDEQ-G 699
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+ +L +K KL DV+L + + GAD+ +C A + I+ I
Sbjct: 700 RYEILLTKTKKMKLDPDVNLRKIAKECHGYV-GADLAQLCFEAAIQCIKEHI 750
Score = 43 (20.2 bits), Expect = 3.1e-52, Sum P(2) = 3.1e-52
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 3 YIESFHNRINEDILSHLLTNYFATPRYHHL-NDIV 36
YI N+ ++D + +L Y + H L NDI+
Sbjct: 208 YINKVENKQSDDKIKNLNNKYIKKFKSHILQNDIL 242
>MGI|MGI:1918632 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005777 "peroxisome" evidence=ISO;IDA]
[GO:0005778 "peroxisomal membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0006810 "transport" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0008289 "lipid
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0042623 "ATPase
activity, coupled" evidence=ISO] [GO:0060152 "microtubule-based
peroxisome localization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1918632 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005777 GO:GO:0005778 GO:GO:0008289
GO:GO:0016558 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0060152 KO:K13338
PANTHER:PTHR23077:SF12 CTD:5189 HOVERGEN:HBG008169 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 EMBL:BC090845 EMBL:AK017309
EMBL:AK149599 IPI:IPI00136789 IPI:IPI00653755 RefSeq:NP_082053.1
UniGene:Mm.379196 PDB:1WLF PDBsum:1WLF ProteinModelPortal:Q5BL07
SMR:Q5BL07 STRING:Q5BL07 PhosphoSite:Q5BL07 PaxDb:Q5BL07
PRIDE:Q5BL07 Ensembl:ENSMUST00000006061 Ensembl:ENSMUST00000121291
GeneID:71382 KEGG:mmu:71382 UCSC:uc008whf.1
GeneTree:ENSGT00550000075032 HOGENOM:HOG000252959 InParanoid:Q5BL07
OrthoDB:EOG4JM7P2 EvolutionaryTrace:Q5BL07 NextBio:333669
Bgee:Q5BL07 CleanEx:MM_PEX1 Genevestigator:Q5BL07 Uniprot:Q5BL07
Length = 1284
Score = 552 (199.4 bits), Expect = 3.8e-52, P = 3.8e-52
Identities = 127/329 (38%), Positives = 201/329 (61%)
Query: 115 PERRLLIQYQL--DCLGGDYGFDASL-VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGI 171
PE+R I + + + LG D L ++ ++ T F D T LV ++ + + +Q
Sbjct: 743 PEQRCEILHSVVKNKLGCDISNFPDLDLQCIAKDTEAFVARDFTVLVDRAIHSSLSRQHS 802
Query: 172 NKRD---LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR 228
+ R+ L DFQ+ ++ ++ W+ IGGL +++ ++ T + +
Sbjct: 803 SSREDLTLTTSDFQKALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAK 862
Query: 229 TSGL-------KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEEN 281
L +R+G+LLYGPPGTGKTL+A VA E MNF+++KGPELL+KYIG SE+
Sbjct: 863 YPELFANLPIRQRTGILLYGPPGTGKTLLAGVVARESGMNFISIKGPELLSKYIGASEQA 922
Query: 282 IRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFI 341
+R+VF++A++A PC++FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++
Sbjct: 923 VRDVFIRAQAAKPCILFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYV 980
Query: 342 LGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHH 401
L AT+R DL+DPA+LRPGRLDK +Y D++S+L +L + + L+DDV L V
Sbjct: 981 LAATSRPDLIDPALLRPGRLDKCVYCPP-PDQVSRLEILTVLSKSLALADDVDLQH-VAS 1038
Query: 402 FPSQMSGADIYSICSNAWTRAIR-RIITS 429
+GAD+ ++ NA A++ R++ S
Sbjct: 1039 VTDSFTGADLKALLYNAQLEALQGRLLPS 1067
>UNIPROTKB|E1BY08 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0016558 "protein
import into peroxisome matrix" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042623 "ATPase activity,
coupled" evidence=IEA] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 OMA:HSWEKEK InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 EMBL:AADN02000702 EMBL:AADN02000703
IPI:IPI00602002 RefSeq:XP_418655.2 UniGene:Gga.2955
ProteinModelPortal:E1BY08 Ensembl:ENSGALT00000015329 GeneID:420554
KEGG:gga:420554 NextBio:20823448 Uniprot:E1BY08
Length = 1290
Score = 552 (199.4 bits), Expect = 3.8e-52, P = 3.8e-52
Identities = 129/323 (39%), Positives = 191/323 (59%)
Query: 120 LIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGI---NKRDL 176
+I+ +L+C + D L +Y++ T GF D T LV ++ + Q + +L
Sbjct: 760 VIKNKLNCDVKKFS-DLDL-QYVAKETEGFVARDFTMLVDRAIHACISNQNAFQHGELNL 817
Query: 177 QKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL---- 232
DFQ+ D + ++ W+ IGGL ++ ++ T + L
Sbjct: 818 STVDFQKALKDFTPLALRNVSLHKPKDIGWDRIGGLKDVRQILMDTIMLPAKYPELFANL 877
Query: 233 ---KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKA 289
+RSG+LLYG PGTGKTL+A VA E MNF++VKGPELL+KYIG SE+ +R++F +A
Sbjct: 878 PIRQRSGVLLYGAPGTGKTLLAGVVARESGMNFISVKGPELLSKYIGASEQAVRDIFSRA 937
Query: 290 RSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVD 349
++A PC+VFFDE DS+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R D
Sbjct: 938 QAAKPCIVFFDEFDSIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPD 995
Query: 350 LLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGA 409
L+DPA+LRPGRLDK LY D+ S+ +LKA+ L++DV L+ L +GA
Sbjct: 996 LIDPALLRPGRLDKCLYCPP-PDQSSRCEILKALSHSLSLANDVDLEYLAAK-TEHFTGA 1053
Query: 410 DIYSICSNAWTRAIRRIITSAPQ 432
D+ ++ NA AI + + Q
Sbjct: 1054 DLKALLYNAQLEAIHNLSSGLTQ 1076
>RGD|1311270 [details] [associations]
symbol:Nvl "nuclear VCP-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0016235 "aggresome"
evidence=IEA;ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1311270 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 KO:K14571 EMBL:CH473985 CTD:4931 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN GeneTree:ENSGT00570000079239 IPI:IPI00371541
RefSeq:NP_001099450.1 UniGene:Rn.8896 Ensembl:ENSRNOT00000004927
GeneID:289323 KEGG:rno:289323 UCSC:RGD:1311270 NextBio:629627
Uniprot:D3ZTY9
Length = 855
Score = 545 (196.9 bits), Expect = 4.5e-52, P = 4.5e-52
Identities = 122/257 (47%), Positives = 170/257 (66%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VPNV+W D+G L ++ E IL+ R R GL +G+LL GPPG GKTL+AK
Sbjct: 573 TVPNVTWADVGALEDIREELTMAILAPVRNPEQFRALGLVAPAGVLLAGPPGCGKTLLAK 632
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 633 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 690
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE- 371
D+ +G RVV+QLL EMDG+ T Q VFIL ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 691 DRETGASVRVVNQLLTEMDGLETRQQVFILAATNRPDIIDPAILRPGRLDKTLFVGLPPP 750
Query: 372 -DRISQLGVLKAVVRKFKLSDDVSLDSLVH-HFPSQMSGADIYSICSNAWTRAIRRIITS 429
DR++ L + K L +DV L+++ + H +GAD+ ++ A A+R+ IT
Sbjct: 751 ADRVAILKTITKNGTKPPLDEDVDLEAIANDHRCDCYTGADLSALVREASLCALRQEITG 810
Query: 430 APQ-VKSAPVIVTMDDF 445
+ +A + V+ F
Sbjct: 811 QKNGIGTAELTVSHKHF 827
Score = 378 (138.1 bits), Expect = 6.7e-34, P = 6.7e-34
Identities = 103/284 (36%), Positives = 161/284 (56%)
Query: 157 LVRLSVKNKMLKQGI-NKRD---LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGL 212
L+ K K +G NKR LQ+ D +I LQ R + + +V +ED+GG
Sbjct: 211 LLESDKKRKSRAKGKGNKRKTEGLQEAD-GEIEAILQKRAKAKSTELQISSVKFEDVGGN 269
Query: 213 -SKLK--AEILSTFRG--VNRTSGL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVK 266
+ LK ++L R V + G+ G+LL+GPPG GKTL+A A+A E + L V
Sbjct: 270 DATLKEVCKMLIHMRHPEVYQHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVA 329
Query: 267 GPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQL 326
PE+++ G+SE+ +R++F +A S APC+VF DE+D++ P+R E S + R+V+QL
Sbjct: 330 APEIVSGVSGESEQKLRDLFDQAVSNAPCIVFIDEIDAITPKR--EVASKDMERRIVAQL 387
Query: 327 LAEMD---GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAV 383
L MD V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ +
Sbjct: 388 LTCMDDLNNVAATARVLVVGATNRPDSLDPALRRAGRFDREVCLGI-PDEASRERILQTL 446
Query: 384 VRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
RK +L + + L H P + GAD+ ++C A A+ R++
Sbjct: 447 CRKLRLPETFNFSHLAHLTPGFV-GADLMALCREAAVCAVHRVL 489
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 515 (186.3 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 116/294 (39%), Positives = 176/294 (59%)
Query: 137 SLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQL 196
SL E +S V + + +C ++ + KQG + + EDF+ ++ ++
Sbjct: 660 SLDETVSLVADDIQNNGNSCSEQM-----LRKQGEHTLSVGFEDFENAKTKIRPSAMREV 714
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-TSGLKR------SGLLLYGPPGTGKTL 249
VP V+WED+GG +++K +++ + KR SG+L++GPPG KTL
Sbjct: 715 IL-EVPKVNWEDVGGQNEVKNQLMEAVEWPQKHQDAFKRIGTRPPSGILMFGPPGCSKTL 773
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+A+AVA+E ++NFLAVKGPEL +K++G+SE+ +R++F KAR+ AP ++FFDE+DSLA R
Sbjct: 774 MARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSIIFFDEIDSLASIR 833
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
G+E+ V DRV+SQLL E+DG+H V ++ ATNR D +D A+LRPGR D+ LYVG
Sbjct: 834 GKENDGVSVSDRVMSQLLVELDGLHQRVGVTVIAATNRPDKIDSALLRPGRFDRLLYVGP 893
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI 423
+ + +LK +RK S D+ L L +GADI IC A A+
Sbjct: 894 -PNETDREAILKIHLRKIPCSSDICLKELAS-ITKGYTGADISLICREAAIAAL 945
Score = 354 (129.7 bits), Expect = 7.6e-33, Sum P(2) = 7.6e-33
Identities = 89/265 (33%), Positives = 150/265 (56%)
Query: 187 DLQSR-YSDQLDAPSVPNVSWE--DIGGLSKLKA---EILSTFRGVNRTS--GLKRS-GL 237
++Q R + L NV E +GGLSK A +I+ + N S GL+ + G+
Sbjct: 362 EIQGRTFVQGLQFDEGENVGCEISKLGGLSKEYAILRDIIDSSSIKNSLSSLGLRPTKGV 421
Query: 238 LLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVV 297
L++GPPGTGKT +A+ A +NF +V GPE++++Y+G+SE+ + VF A +A P VV
Sbjct: 422 LIHGPPGTGKTSLARTFARHSGVNFFSVNGPEIISQYLGESEKALDEVFRSASNATPAVV 481
Query: 298 FFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILR 357
F D+LD++AP R + + + R+V+ LL MDG+ + V ++ ATNR D ++PA+ R
Sbjct: 482 FIDDLDAIAPARKEGGEE--LSQRMVATLLNLMDGISRTDGVVVIAATNRPDSIEPALRR 539
Query: 358 PGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLS-DDVSLDSLV---HHFPSQMSGADIYS 413
PGRLD+ + +G+ + +L ++R + S ++ ++ L H F GAD+ +
Sbjct: 540 PGRLDREIEIGV-PSSTQRSDILHIILRGMRHSLSNIQVEQLAMATHGFV----GADLSA 594
Query: 414 ICSNAWTRAIRRIITSAPQVKSAPV 438
+C A +RR + + + P+
Sbjct: 595 LCCEAAFVCLRRHLDQSSSSSNLPL 619
Score = 43 (20.2 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 106 TINVLPLTEPERRLLIQYQLDCLGGDYGFDASLV 139
T++V L PE R + L + +YG D+ +
Sbjct: 97 TVSV-SLASPESRFSRSFPLSSIKAEYGDDSESI 129
Score = 37 (18.1 bits), Expect = 6.5e-52, Sum P(3) = 6.5e-52
Identities = 9/19 (47%), Positives = 11/19 (57%)
Query: 139 VEYLSSVTSGFERHDLTCL 157
VE L+ T GF DL+ L
Sbjct: 577 VEQLAMATHGFVGADLSAL 595
>DICTYBASE|DDB_G0289867 [details] [associations]
symbol:pex1 "peroxisomal biogenesis factor 1"
species:44689 "Dictyostelium discoideum" [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=IEA;ISS] [GO:0006625 "protein
targeting to peroxisome" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0289867 GO:GO:0005524
GO:GO:0005777 GO:GO:0007031 GenomeReviews:CM000154_GR GO:GO:0005778
EMBL:AAFI02000149 HSSP:Q01853 eggNOG:COG0464 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_636032.1
ProteinModelPortal:Q54GX5 EnsemblProtists:DDB0238022 GeneID:8627359
KEGG:ddi:DDB_G0289867 Uniprot:Q54GX5
Length = 1227
Score = 537 (194.1 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 112/227 (49%), Positives = 155/227 (68%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNR------TSGLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+ W+DIGGL ++A + T + +S L+ RSG+LLYGP G GKTL+A A+A
Sbjct: 863 IKWQDIGGLDSVRAMLKETIEWPTKYPKLFQSSPLRLRSGILLYGPTGCGKTLLASAIAG 922
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
EC +NF++VKGPELLNKYIG SE+ +R+VF +A SA PCV+FFDE DS+APRRG ++ S
Sbjct: 923 ECGLNFISVKGPELLNKYIGSSEQGVRDVFSRASSAKPCVLFFDEFDSIAPRRGHDN--S 980
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
GV DRVV+Q L ++DGV V++L AT+R DL+DPA+LRPGRLDKSLY + E +
Sbjct: 981 GVTDRVVNQFLTQLDGVEGLTGVYVLAATSRPDLIDPALLRPGRLDKSLYCNIPEFN-ER 1039
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI 423
L +L + K LS +SL+ L + +GAD+ ++ NA ++I
Sbjct: 1040 LDILTCLKSKMNLSPSISLEQLSTN-TQYYTGADLRALMYNAQLKSI 1085
Score = 39 (18.8 bits), Expect = 1.0e-51, Sum P(2) = 1.0e-51
Identities = 8/12 (66%), Positives = 9/12 (75%)
Query: 95 IRKQIQKLFLKT 106
IRKQ KLF K+
Sbjct: 652 IRKQFNKLFYKS 663
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 539 (194.8 bits), Expect = 1.4e-51, P = 1.4e-51
Identities = 114/231 (49%), Positives = 156/231 (67%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNV WEDIGGL ++K E+ T + V R G+L +GPPGTGKTL+AKA
Sbjct: 491 VPNVRWEDIGGLEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLLAKA 550
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A EC NF++VKGPELL+ + G+SE N+R++F KAR+AAPCVVF DELDS+A RG
Sbjct: 551 IANECSANFISVKGPELLSMWFGESESNVRDIFDKARAAAPCVVFLDELDSIAKARGASA 610
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
SG DRVV+QLL EMDGV++ ++VF++GATNR D +DPA++RPGRLD+ +YV L D
Sbjct: 611 GDSGGGDRVVNQLLTEMDGVNSKKNVFVIGATNRPDQIDPALMRPGRLDQLIYVPL-PDE 669
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ +L+ +R +++DV L + V SGAD+ + A AI+
Sbjct: 670 EARFSILQTQLRHTPVAEDVDLRA-VAKATHGFSGADLEFVVQRAVKLAIK 719
Score = 421 (153.3 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 123/378 (32%), Positives = 194/378 (51%)
Query: 106 TINVLPLTEPERRLLIQYQLDCLGGDYG--FDASLVEYLSSVTSGFERHDLTCLVRLSVK 163
TIN P + R+ + D + G G FD L Y + DL +VR S++
Sbjct: 121 TINPCPDIKYAERISVLPLADTVEGLTGSLFDVYLKPYFVEAYRPIRKGDLF-VVRGSMR 179
Query: 164 NKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQL-----DAPSVPNVSWEDIGGLSKLKAE 218
K D+ ++F + D + + + S+ V ++DIGG + A+
Sbjct: 180 QVEFKVV----DVAPDEFGIVSQDTIIHWEGEPINREDEESSLAEVGYDDIGGCRRQMAQ 235
Query: 219 ILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELL 271
I + ++ G+K G+L+YGPPGTGKTL+A+AVA E F + GPE++
Sbjct: 236 IRELVELPLRHPQLFKSIGIKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIM 295
Query: 272 NKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD 331
+K G+SE N+R F +A +P ++F DE+DS+AP+R E + V RVVSQLL MD
Sbjct: 296 SKMAGESESNLRKAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVERRVVSQLLTLMD 353
Query: 332 GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSD 391
G+ +V ++ ATNR + +DPA+ R GR D+ + VG+ D +L +L+ + KL+D
Sbjct: 354 GMKARSNVVVMAATNRPNSIDPALRRFGRFDREVDVGI-PDPTGRLEILRIHTKNMKLAD 412
Query: 392 DVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI----VTMDD 444
DV L+ + + G+D+ S+CS A + IR +I A V+ VTMD+
Sbjct: 413 DVDLEQIAAETHGYV-GSDLASLCSEAAMQQIREKMDMIDLDEDEIDAEVLDSLGVTMDN 471
Query: 445 FLGACSLATAPDKFSQSV 462
F A ++ P ++V
Sbjct: 472 FRFALG-SSNPSALRETV 488
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 538 (194.4 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 115/244 (47%), Positives = 163/244 (66%)
Query: 201 VPNVSWEDIGGLSKLKAE----ILSTFRGVNRTS--GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNV W+DIGGL ++K+ IL ++ G+ S G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
VA+EC NF+++KGPELL + G+SE N+R VF KAR+AAPCV+FFDELDS+ +RG
Sbjct: 534 VASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSL 593
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
SG DRV++QLL E+DGV +++F +GATNR +LLD A+LRPGRLD+ +Y+ L D
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL-PD 652
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+++ +L A++RK ++++V +D L + SGAD+ +C A AIR I +
Sbjct: 653 LGARISILTAILRKCPVAENVPIDFLAQK-TAGFSGADLAELCQRAARAAIRDAIDAEEM 711
Query: 433 VKSA 436
K +
Sbjct: 712 NKKS 715
Score = 424 (154.3 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 121/373 (32%), Positives = 196/373 (52%)
Query: 102 LFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVR-- 159
+++K+ +P + + L I ++ L D F+ L Y + ++ DL LVR
Sbjct: 103 VYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLF-LVRGG 161
Query: 160 -LSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYS-DQL---DAPSVPNVSWEDIGGLSK 214
+SV+ K++ ++ +DF + D Y D + D + + ++DIGG K
Sbjct: 162 FMSVEFKVV-------EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKK 214
Query: 215 LKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKG 267
A+I G+ +T G+K G+LLYGPPG+GKT IA+AVA E F + G
Sbjct: 215 QLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLING 274
Query: 268 PELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLL 327
PE+++K G++E N+R F +A +P ++F DE+DS+AP+R E + V RVVSQLL
Sbjct: 275 PEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVERRVVSQLL 332
Query: 328 AEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKF 387
MDG+ + V ++ ATNR + +DPA+ R GR D+ + +G+ +D + +L+ +
Sbjct: 333 TLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN-GRFEILRIHTKNM 391
Query: 388 KLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI----V 440
KLS DV L+ L + + GAD+ +C+ A IR +I ++ V+ V
Sbjct: 392 KLSPDVKLEELASNTHGFV-GADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCV 450
Query: 441 TMDDF---LGACS 450
T D F LG C+
Sbjct: 451 TQDHFNMALGTCN 463
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 538 (194.4 bits), Expect = 2.1e-51, P = 2.1e-51
Identities = 115/244 (47%), Positives = 163/244 (66%)
Query: 201 VPNVSWEDIGGLSKLKAE----ILSTFRGVNRTS--GLKRS-GLLLYGPPGTGKTLIAKA 253
VPNV W+DIGGL ++K+ IL ++ G+ S G+L YGPPG GKTL+AKA
Sbjct: 474 VPNVKWDDIGGLDEVKSTLREMILYPIDHPDKFEKFGMSPSRGVLFYGPPGCGKTLLAKA 533
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE- 312
VA+EC NF+++KGPELL + G+SE N+R VF KAR+AAPCV+FFDELDS+ +RG
Sbjct: 534 VASECSANFVSIKGPELLTMWFGESEANVREVFDKARAAAPCVLFFDELDSIGTQRGSSL 593
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
SG DRV++QLL E+DGV +++F +GATNR +LLD A+LRPGRLD+ +Y+ L D
Sbjct: 594 GDGSGAGDRVMNQLLTEIDGVGPKKNLFFIGATNRPELLDEALLRPGRLDQLIYIPL-PD 652
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+++ +L A++RK ++++V +D L + SGAD+ +C A AIR I +
Sbjct: 653 LGARISILTAILRKCPVAENVPIDFLAQK-TAGFSGADLAELCQRAARAAIRDAIDAEEM 711
Query: 433 VKSA 436
K +
Sbjct: 712 NKKS 715
Score = 424 (154.3 bits), Expect = 6.6e-39, P = 6.6e-39
Identities = 121/373 (32%), Positives = 196/373 (52%)
Query: 102 LFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVR-- 159
+++K+ +P + + L I ++ L D F+ L Y + ++ DL LVR
Sbjct: 103 VYVKSCPEIPYGKKIQVLPIDDTIEGLAKDTLFEIFLKPYFNESYRPVKKGDLF-LVRGG 161
Query: 160 -LSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYS-DQL---DAPSVPNVSWEDIGGLSK 214
+SV+ K++ ++ +DF + D Y D + D + + ++DIGG K
Sbjct: 162 FMSVEFKVV-------EVDPDDFCIVSPDTVIYYEGDPIKRDDEEKLDEIGYDDIGGCKK 214
Query: 215 LKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKG 267
A+I G+ +T G+K G+LLYGPPG+GKT IA+AVA E F + G
Sbjct: 215 QLAQIREMIELPLRHPGLFKTLGVKPPRGVLLYGPPGSGKTCIARAVANETGAFFFLING 274
Query: 268 PELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLL 327
PE+++K G++E N+R F +A +P ++F DE+DS+AP+R E + V RVVSQLL
Sbjct: 275 PEVMSKMAGEAEANLRRAFEEAEKNSPAIIFIDEIDSIAPKR--EKTNGEVERRVVSQLL 332
Query: 328 AEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKF 387
MDG+ + V ++ ATNR + +DPA+ R GR D+ + +G+ +D + +L+ +
Sbjct: 333 TLMDGIKSRGQVVVIAATNRQNSIDPALRRFGRFDREIDIGVPDDN-GRFEILRIHTKNM 391
Query: 388 KLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI----V 440
KLS DV L+ L + + GAD+ +C+ A IR +I ++ V+ V
Sbjct: 392 KLSPDVKLEELASNTHGFV-GADLAQLCTEAALTCIREKMDVIDLEDEIIDKEVLESMCV 450
Query: 441 TMDDF---LGACS 450
T D F LG C+
Sbjct: 451 TQDHFNMALGTCN 463
>UNIPROTKB|O15381 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571
EMBL:U68140 EMBL:U78772 EMBL:AK297396 EMBL:AK298244 EMBL:AC092809
EMBL:BC012105 IPI:IPI00006197 IPI:IPI00183080 IPI:IPI00185801
RefSeq:NP_001230075.1 RefSeq:NP_001230076.1 RefSeq:NP_002524.2
RefSeq:NP_996671.1 UniGene:Hs.497867 PDB:2X8A PDBsum:2X8A
ProteinModelPortal:O15381 SMR:O15381 IntAct:O15381
MINT:MINT-1423251 STRING:O15381 PhosphoSite:O15381
SWISS-2DPAGE:O15381 PaxDb:O15381 PRIDE:O15381 DNASU:4931
Ensembl:ENST00000281701 Ensembl:ENST00000340871
Ensembl:ENST00000391875 Ensembl:ENST00000469075 GeneID:4931
KEGG:hsa:4931 UCSC:uc001hok.3 CTD:4931 GeneCards:GC01M224416
HGNC:HGNC:8070 HPA:HPA028207 MIM:602426 neXtProt:NX_O15381
PharmGKB:PA31857 HOVERGEN:HBG001226 InParanoid:O15381 OMA:NDMTLKE
OrthoDB:EOG4ZPDTN PhylomeDB:O15381 ChiTaRS:NVL
EvolutionaryTrace:O15381 GenomeRNAi:4931 NextBio:19001
ArrayExpress:O15381 Bgee:O15381 CleanEx:HS_NVL
Genevestigator:O15381 GermOnline:ENSG00000143748 Uniprot:O15381
Length = 856
Score = 524 (189.5 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 113/237 (47%), Positives = 159/237 (67%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGL---KRSGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R ++ L +G+LL GPPG GKTL+AK
Sbjct: 574 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 633
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 634 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRS-- 691
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 692 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 750
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + K L DV+L+++ +GAD+ ++ A A+R+
Sbjct: 751 PADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALRQ 807
Score = 383 (139.9 bits), Expect = 1.9e-34, P = 1.9e-34
Identities = 101/289 (34%), Positives = 159/289 (55%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGLSKLKAE 218
K K+ +G +KR +KED Q++ ++++ + A + NV +ED+GG E
Sbjct: 220 KGKLKNKG-SKR--KKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKE 276
Query: 219 I---LSTFRG--VNRTSGL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
+ L R V G+ G+LL+GPPG GKTL+A A+A E + L V PE+++
Sbjct: 277 VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 336
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD- 331
G+SE+ +R +F +A S APC++F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 337 GVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 394
Query: 332 --GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 395 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 453
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAP-QVKSAP 437
L H P + GAD+ ++C A A+ R++ Q K P
Sbjct: 454 PQAFDFCHLAHLTPGFV-GADLMALCREAAMCAVNRVLMKLQEQQKKNP 501
Score = 38 (18.4 bits), Expect = 2.6e-51, Sum P(2) = 2.6e-51
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 141 YLSSVTSGFERHDLTCLVR---LSVKNKMLK--QGINKRDLQKED 180
+L+ +T GF DL L R + N++L Q K++ + ED
Sbjct: 461 HLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMED 505
>UNIPROTKB|E1BPU3 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:DAAA02009765 EMBL:DAAA02009763 EMBL:DAAA02009764
IPI:IPI00699088 Ensembl:ENSBTAT00000033872 Uniprot:E1BPU3
Length = 1281
Score = 543 (196.2 bits), Expect = 3.5e-51, P = 3.5e-51
Identities = 126/325 (38%), Positives = 195/325 (60%)
Query: 120 LIQYQLDC-LGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--- 175
+I+ +LDC + G D ++ ++ T GF D T LV ++ + + Q + R+
Sbjct: 751 IIKNKLDCDMKRFTGLD---LQRIAKETEGFVARDFTMLVDRAIHSHLSHQNVYTREELV 807
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL--- 232
L DFQ+ ++ ++ W+ IGGL ++ ++ T + + L
Sbjct: 808 LTTLDFQKALRGFTPVSLRNVNLHKPRDLGWDRIGGLHDVRQILVDTIQLPAKYPELFAN 867
Query: 233 ----KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
+R+G+LLYGPPGTGKTL+A +A E MNF++VKGPELL+KYIG SE+ +R+VF++
Sbjct: 868 LPIRQRTGVLLYGPPGTGKTLLAGVIARESGMNFISVKGPELLSKYIGASEQAVRDVFVR 927
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRV 348
A++A PC++FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R
Sbjct: 928 AQAAKPCILFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRP 985
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSG 408
DL+DPA+LRPGRLDK +Y D+ S+L +L + L+DDV L V +G
Sbjct: 986 DLIDPALLRPGRLDKCVYCPP-PDQASRLEILNVLSESLPLADDVDLQH-VASLTDSFTG 1043
Query: 409 ADIYSICSNAWTRAIR-RIITSAPQ 432
AD+ ++ A A+ R++T Q
Sbjct: 1044 ADLKALLYGAQLEALHGRLLTGGLQ 1068
>UNIPROTKB|E1BT72 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016235 "aggresome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0005730
GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AADN02012163 IPI:IPI00584236
Ensembl:ENSGALT00000015173 ArrayExpress:E1BT72 Uniprot:E1BT72
Length = 858
Score = 537 (194.1 bits), Expect = 3.6e-51, P = 3.6e-51
Identities = 138/343 (40%), Positives = 201/343 (58%)
Query: 106 TIN-VLPLTEPERRLLIQYQLDCLGGDYGFDASL-VEYLSSVTSGFERHDLTCLVRLSVK 163
T+N VL +E ++R +Q + G + + VE + E +L L+ L K
Sbjct: 480 TVNRVLIKSEEQQRKYVQAGGNTAEESVGIETEIPVEENTKQLPSKE--ELQRLLYLLKK 537
Query: 164 NKMLKQG-INKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAE---- 218
L + + K ++ DF +Q + ++P+V+W DIG L ++ E
Sbjct: 538 QDPLPEDQLQKLCIEMNDFIVALSSVQPSAKRE-GFVTIPDVTWADIGALEDVREELTMA 596
Query: 219 ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYI 275
IL+ R + GL +G+LL GPPG GKTL+AKAVA E +NF++VKGPELLN Y+
Sbjct: 597 ILAPVRNPEQFKALGLTTPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYV 656
Query: 276 GQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHT 335
G+SE +R VF +AR++APCV+FFDE+D+L PRR D+ SG RVV+QLL EMDG+
Sbjct: 657 GESERAVRQVFQRARNSAPCVIFFDEVDALCPRRS--DRESGASVRVVNQLLTEMDGLEN 714
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY--EDRISQLGVLKAVVRKFKLSDDV 393
Q VFI+ ATNR D++DPAILRPGRLDK+LYVGL EDR++ L + + L DV
Sbjct: 715 RQQVFIMAATNRPDIIDPAILRPGRLDKTLYVGLPPPEDRLAILKTITKDGTRPPLDTDV 774
Query: 394 SLDSLVHHFPSQM-SGADIYSICSNAWTRAIRRIITSAPQVKS 435
+L+ + + +GAD+ ++ A A+R+ + + P KS
Sbjct: 775 NLEEIAYSQQCDCYTGADLSALVREASICALRQEM-ALPTTKS 816
Score = 367 (134.2 bits), Expect = 1.0e-32, P = 1.0e-32
Identities = 92/286 (32%), Positives = 155/286 (54%)
Query: 161 SVKNKMLKQGINKRDLQKEDFQQIYDDLQS---RYSDQLDAPSV--PNVSWEDIGGLSKL 215
SV K+ KR +K++F + ++++S + + P + P+V +ED+GG +
Sbjct: 209 SVLESEKKKTKGKRAKRKKEFPDVDEEIESILLKGKVKSKGPELYHPSVKFEDVGGNDET 268
Query: 216 KAEILSTFRGVNRTS-----GL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPE 269
EI V G+ G LL+GPPG GKTL+A+A+A E + L V E
Sbjct: 269 LKEICKMLIHVRHPEVYLHLGVVPPRGFLLHGPPGCGKTLLAQAIAGELELPMLKVAATE 328
Query: 270 LLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLA- 328
+++ G+SE+ +R +F +A APCV+F DE+D++ P+R E S + R+V+QLL
Sbjct: 329 MVSGVSGESEQKLRELFDQAVLNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTC 386
Query: 329 --EMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRK 386
+++ V + V ++GATNR D LDPA+ R GR D+ + +G+ D ++ +L+ + RK
Sbjct: 387 LDDLNNVAATAQVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEAAREKILQTLCRK 445
Query: 387 FKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
KL L H P + GAD+ ++C A + R++ + +
Sbjct: 446 LKLPGSFDFLHLAHLTPGYV-GADLMALCREAAMCTVNRVLIKSEE 490
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 537 (194.1 bits), Expect = 3.8e-51, P = 3.8e-51
Identities = 127/321 (39%), Positives = 189/321 (58%)
Query: 143 SSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVP 202
SS T+ L+ + +S K + + +N ++ DF++ + + A ++P
Sbjct: 504 SSSTTNINNIGLSTELLIS-KEPLEPEKLNSLYIEMIDFKKALKKVVPAAKREGFA-TIP 561
Query: 203 NVSWEDIGGLSKLKAEIL-STFRGVN-----RTSGLKR-SGLLLYGPPGTGKTLIAKAVA 255
NV+W+D+G LS ++ E+ S R + + G+ +G+L+YGPPG GKTL+AKA+A
Sbjct: 562 NVTWDDVGALSGVREELTNSILRPIRYPKKYKNMGIDSPAGVLMYGPPGCGKTLLAKAIA 621
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+EC+ NF++VKGPELLNKY+G+SE +R VF +A +++PCV+FFDE D+LAP+RG D
Sbjct: 622 SECQANFISVKGPELLNKYVGESERAVRQVFQRAAASSPCVIFFDEFDALAPKRGGGDGG 681
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+RVV+QLL EMDG+ +VFI+ ATNR D++D A+ RPGRLDK +YV L
Sbjct: 682 GNQATERVVNQLLTEMDGLEKRSEVFIIAATNRPDIIDAAMCRPGRLDKMVYVPLPSPE- 740
Query: 375 SQLGVLKAVVRKFKLSDDVSL-----DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ +LK + K + DV L D H F SGAD+ + A AI R +
Sbjct: 741 ERCEILKTLTHKIPIHQDVDLIKVGTDLRCHSF----SGADLSLLVKEAANHAISRGFDN 796
Query: 430 APQVKSAPVIVTMDDFLGACS 450
+ P VTM+DF+ A S
Sbjct: 797 N---STEPDTVTMEDFIFALS 814
Score = 222 (83.2 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 55/181 (30%), Positives = 96/181 (53%)
Query: 161 SVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEIL 220
S K LK N ++ + F ++ + + L +P +++ ++GG+ +I
Sbjct: 172 SKPKKKLKNSSNGNNVFQ--FSNNNNNNGNNKDNNLSNGLIPTINFSNLGGVESCLRDIR 229
Query: 221 STFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNK 273
+ G++ G+LL+GP G GKTL+AKA+A E ++ A+ E+ +
Sbjct: 230 EHIEYPICHPEIYSHLGVEPPRGILLHGPSGCGKTLLAKAIAGELKVPLFAISATEITSG 289
Query: 274 YIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
G+SE +R +F A + APC++F DE+D++AP+R E S + R+VSQLL MD +
Sbjct: 290 VSGESEARVRTLFSNAIAQAPCIIFIDEIDAIAPKR--ESASKDMERRIVSQLLTCMDSL 347
Query: 334 H 334
+
Sbjct: 348 N 348
Score = 132 (51.5 bits), Expect = 6.3e-24, Sum P(2) = 6.3e-24
Identities = 30/91 (32%), Positives = 51/91 (56%)
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++GATNR + LD A+ GR DK + +G+ D+ ++ +LK + K +L ++ + +
Sbjct: 403 VIVIGATNRPESLDTALRIGGRFDKEICLGI-PDQTARCKILKVITSKMRLENNFDYEEI 461
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
P + GADI + A T ++ RI TS
Sbjct: 462 ATLTPGYV-GADINLLVKEAATNSVNRIFTS 491
>UNIPROTKB|F1MIM8 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016235 "aggresome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0016235 GO:GO:0017111 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:DAAA02042637 EMBL:DAAA02042638
IPI:IPI00715498 Ensembl:ENSBTAT00000047473 Uniprot:F1MIM8
Length = 855
Score = 518 (187.4 bits), Expect = 9.7e-51, Sum P(2) = 9.7e-51
Identities = 113/237 (47%), Positives = 158/237 (66%)
Query: 200 SVPNVSWEDIGGLSKLKAEILST--FRGVN----RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E+ F N R GL +G+LL GPPG GKTL+AK
Sbjct: 573 TVPNVTWADIGALEDIREELTMAILFLLCNPDQFRVLGLVTPAGVLLAGPPGCGKTLLAK 632
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 633 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSAR 692
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ + V RVV+QLL EMDG+ T Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 693 ETGASV--RVVNQLLTEMDGLETRQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 749
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + K L DV+L+++ +GAD+ ++ A A+++
Sbjct: 750 PADRLAILKTITKNGTKPPLDADVNLEAIAGDLRCDCYTGADLSALVREASICALKQ 806
Score = 375 (137.1 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 100/292 (34%), Positives = 162/292 (55%)
Query: 164 NKMLKQGINKRD--LQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGL-SKLK 216
NK K +N + +KED Q++ ++++ + A + +V +ED+GG + LK
Sbjct: 215 NKKRKGKLNSKGGKKKKEDLQEVDGEIEAVLQKRAKAKGLELQISSVKFEDVGGNDTTLK 274
Query: 217 --AEILSTFRG--VNRTSG-LKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELL 271
++L R V G + G+LL+GPPG GKTL+A A+A E + L V E++
Sbjct: 275 EVCKMLVHMRHPEVYHHLGVIPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEIV 334
Query: 272 NKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD 331
+ G+SE+ +R +F +A S+APC++F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 335 SGVSGESEQKLRELFEQAVSSAPCILFIDEIDAITPKR--EIASKDMERRIVAQLLTCMD 392
Query: 332 ---GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFK 388
V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +
Sbjct: 393 DLNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLR 451
Query: 389 LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAP-QVKSAPVI 439
L + L H P + GAD+ ++C A A+ R++ Q K P I
Sbjct: 452 LPETFHFRHLAHLTPGFV-GADLMALCREAAMCAVNRVLMELQGQHKKNPEI 502
Score = 39 (18.8 bits), Expect = 9.7e-51, Sum P(2) = 9.7e-51
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 141 YLSSVTSGFERHDLTCLVR---LSVKNKMLK--QGINKRDLQKE 179
+L+ +T GF DL L R + N++L QG +K++ + E
Sbjct: 460 HLAHLTPGFVGADLMALCREAAMCAVNRVLMELQGQHKKNPEIE 503
>CGD|CAL0002247 [details] [associations]
symbol:PEX1 species:5476 "Candida albicans" [GO:0016887
"ATPase activity" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IEA;ISO] [GO:0016562 "protein
import into peroxisome matrix, receptor recycling"
evidence=IEA;ISO] [GO:0005777 "peroxisome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0006468 "protein phosphorylation"
evidence=IEA] [GO:0004675 "transmembrane receptor protein
serine/threonine kinase activity" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777
GO:GO:0016887 GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0042623 GO:GO:0016562 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1 RefSeq:XP_721303.1
RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73 STRING:Q5AH73
GeneID:3636943 GeneID:3637485 GeneID:3704188 KEGG:cal:CaO19.13818
KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460 Uniprot:Q5AH73
Length = 1091
Score = 526 (190.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 106/230 (46%), Positives = 158/230 (68%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
+++W DIGGL + K +L T + + + RSG+LLYG PG GKTL+A A+A
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+C +NF+++KGPE+LNKYIG SE+++R +F +A++A PC++FFDE DS+AP+RG + S
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHD--S 848
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--YEDR 373
+GV DRVV+Q+L +MDG V++L AT+R DL+D A+LRPGRLDKS+ + YEDR
Sbjct: 849 TGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDR 908
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI 423
L +L+++ K LSDDV+L + + SGAD+ + NA+ +A+
Sbjct: 909 ---LDILQSITTKMDLSDDVNLHEIAEK-TTGFSGADMQGLGYNAYLKAV 954
Score = 38 (18.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 9 NRINEDIL-SHLLTNYFATPRYHHLN 33
+ IN+ +L SHL+ N+ HHLN
Sbjct: 612 DNINKLLLGSHLIENF------HHLN 631
>UNIPROTKB|Q5AH73 [details] [associations]
symbol:PEX1 "Likely peroxisomal biogenesis AAA ATPase Pex1"
species:237561 "Candida albicans SC5314" [GO:0005777 "peroxisome"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0016562 "protein import into peroxisome matrix, receptor
recycling" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
CGD:CAL0002247 GO:GO:0005524 GO:GO:0005777 GO:GO:0016887
GO:GO:0005778 GO:GO:0046982 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AACQ01000020 EMBL:AACQ01000016 GO:GO:0042623
GO:GO:0016562 KO:K13338 PANTHER:PTHR23077:SF12 RefSeq:XP_720794.1
RefSeq:XP_721303.1 RefSeq:XP_888866.1 ProteinModelPortal:Q5AH73
STRING:Q5AH73 GeneID:3636943 GeneID:3637485 GeneID:3704188
KEGG:cal:CaO19.13818 KEGG:cal:CaO19.6460 KEGG:cal:CaO19_6460
Uniprot:Q5AH73
Length = 1091
Score = 526 (190.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 106/230 (46%), Positives = 158/230 (68%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVA 255
+++W DIGGL + K +L T + + + RSG+LLYG PG GKTL+A A+A
Sbjct: 731 SINWSDIGGLKEAKNILLETLEWPTKYAPIFANCPLRLRSGILLYGYPGCGKTLLASAIA 790
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+C +NF+++KGPE+LNKYIG SE+++R +F +A++A PC++FFDE DS+AP+RG + S
Sbjct: 791 GQCGLNFISIKGPEILNKYIGASEQSVRELFERAQAAKPCILFFDEFDSIAPKRGHD--S 848
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--YEDR 373
+GV DRVV+Q+L +MDG V++L AT+R DL+D A+LRPGRLDKS+ + YEDR
Sbjct: 849 TGVTDRVVNQMLTQMDGAEGLDGVYVLAATSRPDLIDSALLRPGRLDKSVICDMPNYEDR 908
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI 423
L +L+++ K LSDDV+L + + SGAD+ + NA+ +A+
Sbjct: 909 ---LDILQSITTKMDLSDDVNLHEIAEK-TTGFSGADMQGLGYNAYLKAV 954
Score = 38 (18.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 9 NRINEDIL-SHLLTNYFATPRYHHLN 33
+ IN+ +L SHL+ N+ HHLN
Sbjct: 612 DNINKLLLGSHLIENF------HHLN 631
>SGD|S000003957 [details] [associations]
symbol:RIX7 "Putative ATPase of the AAA family" species:4932
"Saccharomyces cerevisiae" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042273 "ribosomal large
subunit biogenesis" evidence=IGI;IMP] [GO:0030687 "preribosome,
large subunit precursor" evidence=IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003957
GO:GO:0005524 GO:GO:0005730 EMBL:BK006945 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0042273 GO:GO:0030687
GO:GO:0000055 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:Z73139 PIR:S64785 RefSeq:NP_013066.1 ProteinModelPortal:Q07844
SMR:Q07844 DIP:DIP-6385N IntAct:Q07844 MINT:MINT-621241
STRING:Q07844 PaxDb:Q07844 PeptideAtlas:Q07844 EnsemblFungi:YLL034C
GeneID:850625 KEGG:sce:YLL034C CYGD:YLL034c OrthoDB:EOG40GH00
NextBio:966532 Genevestigator:Q07844 GermOnline:YLL034C
Uniprot:Q07844
Length = 837
Score = 517 (187.1 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 108/270 (40%), Positives = 174/270 (64%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS---- 230
++ EDF + +Q + A +VP+V+W ++G L +++ E+ ++ + + R
Sbjct: 503 IKYEDFLKALPTIQPTAKREGFA-TVPDVTWANVGALQRVRLELNMAIVQPIKRPELYEK 561
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+ G+LL+GPPG GKTL+AKAVA E R NF+++KGPELLNKY+G+SE +IR VF +
Sbjct: 562 VGISAPGGVLLWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTR 621
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRV 348
AR++ PCV+FFDELD+L PRR S RVV+ LL E+DG++ + +F++GATNR
Sbjct: 622 ARASVPCVIFFDELDALVPRRDTSLSESS--SRVVNTLLTELDGLNDRRGIFVIGATNRP 679
Query: 349 DLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKF--KLSDDVSLDSLVHHFP-SQ 405
D++DPA+LRPGRLDKSL++ L +L ++K + + LS DV + ++ + +
Sbjct: 680 DMIDPAMLRPGRLDKSLFIELPNTE-EKLDIIKTLTKSHGTPLSSDVDFEEIIRNEKCNN 738
Query: 406 MSGADIYSICSNAWTRAIRRIITSAPQVKS 435
SGAD+ ++ + A++R + +++S
Sbjct: 739 FSGADLAALVRESSVLALKRKFFQSEEIQS 768
Score = 369 (135.0 bits), Expect = 3.4e-34, Sum P(2) = 3.4e-34
Identities = 88/253 (34%), Positives = 147/253 (58%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S PN S + +GG+ + A+++ + ++G++ G+LL+GPPG GKT IA
Sbjct: 198 SPPNSSLKSLGGMDDVVAQLMELIGLPILHPEIFLSTGVEPPRGVLLHGPPGCGKTSIAN 257
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A+A E ++ F+++ P +++ G+SE+ IR++F +ARS APC+VFFDE+D++ P+R
Sbjct: 258 ALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAPCLVFFDEIDAITPKRDGG 317
Query: 313 DQSSGVMDRVVSQLLAEMDGVH----TSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
Q + R+V+QLL MD + + V I+GATNR D LD A+ R GR D+ + +
Sbjct: 318 AQRE-MERRIVAQLLTSMDELTMEKTNGKPVIIIGATNRPDSLDAALRRAGRFDREICLN 376
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIIT 428
+ + +S+L +LK + K+ + L P + GAD+ ++ + A T AI+RI
Sbjct: 377 V-PNEVSRLHILKKMSDNLKIDGAIDFAKLAKLTPGFV-GADLKALVTAAGTCAIKRIFQ 434
Query: 429 SAPQVKSAPVIVT 441
+ +KS P T
Sbjct: 435 TYANIKSTPTTAT 447
Score = 37 (18.1 bits), Expect = 1.6e-50, Sum P(2) = 1.6e-50
Identities = 8/16 (50%), Positives = 9/16 (56%)
Query: 433 VKSAPVIVTMDDFLGA 448
V +IVTM DF A
Sbjct: 785 VSGEEIIVTMSDFRSA 800
>ZFIN|ZDB-GENE-070530-1 [details] [associations]
symbol:pex1 "peroxisome biogenesis factor 1"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005777
"peroxisome" evidence=IEA] [GO:0007031 "peroxisome organization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0005778 "peroxisomal membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR015342
InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070530-1 GO:GO:0005524 GO:GO:0005778
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12 InterPro:IPR015343
Pfam:PF09263 GeneTree:ENSGT00550000075032 EMBL:CU634017
EMBL:CU928445 IPI:IPI01006424 RefSeq:XP_003200668.1
Ensembl:ENSDART00000114077 Ensembl:ENSDART00000123385
GeneID:100534854 KEGG:dre:100534854 Uniprot:F1Q805
Length = 1237
Score = 536 (193.7 bits), Expect = 1.8e-50, P = 1.8e-50
Identities = 128/294 (43%), Positives = 183/294 (62%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQ--SRYSDQL 196
++ ++ T GF DL L+ ++ L N DL +DF+Q S + QL
Sbjct: 731 LDSVAKETEGFMARDLNLLLERAIHANTLH---NSEDLSCKDFRQALQGFTPPSLWDAQL 787
Query: 197 DAPSVPNVSWEDIGGLSK---LKAEIL---STFRGVNRTSGLKR-SGLLLYGPPGTGKTL 249
APS E IGGL + L +I+ + + + + L++ SG+LLYG PGTGKTL
Sbjct: 788 QAPS--GAGMERIGGLHEARQLLMDIILLPAKYPLLFSSLPLRQCSGVLLYGAPGTGKTL 845
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+A AVA E MNF+++KGPELL+KYIG SE+ +R+VF +A+ A PC++FFDE DSLAPRR
Sbjct: 846 LAGAVAKESGMNFISIKGPELLSKYIGASEQAVRDVFQRAQQAKPCILFFDEFDSLAPRR 905
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
G ++ +GV DRVV+QLL ++DGV V++L A++R DL+DPA+LRPGRLDKSLY
Sbjct: 906 GHDN--TGVTDRVVNQLLTQLDGVEGLTGVYVLAASSRPDLIDPALLRPGRLDKSLYCPP 963
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI 423
DR ++L +L+A+ L+ DV LD + +GAD+ ++ NA AI
Sbjct: 964 -PDRAARLEILRALTHSVPLAADVDLDQIAGA-TELFTGADLKALLYNAQLEAI 1015
>RGD|1559939 [details] [associations]
symbol:Pex1 "peroxisomal biogenesis factor 1" species:10116
"Rattus norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=ISO;IDA] [GO:0005829 "cytosol" evidence=IEA;ISO]
[GO:0006625 "protein targeting to peroxisome" evidence=ISO]
[GO:0007031 "peroxisome organization" evidence=ISO] [GO:0008022
"protein C-terminus binding" evidence=IEA;ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0016558 "protein import into
peroxisome matrix" evidence=IEA;ISO] [GO:0032403 "protein complex
binding" evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0060152 "microtubule-based peroxisome
localization" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382 RGD:1559939
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 InterPro:IPR015343 Pfam:PF09263
GeneTree:ENSGT00550000075032 OrthoDB:EOG4JM7P2 EMBL:CH474013
IPI:IPI00777820 RefSeq:NP_001102690.1 UniGene:Rn.162727
Ensembl:ENSRNOT00000038136 GeneID:500006 KEGG:rno:500006
UCSC:RGD:1559939 NextBio:704745 Uniprot:D3ZZB2
Length = 1283
Score = 536 (193.7 bits), Expect = 2.0e-50, P = 2.0e-50
Identities = 120/308 (38%), Positives = 188/308 (61%)
Query: 128 LGGDYGFDASL-VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD---LQKEDFQQ 183
LG D L ++ ++ T F D T LV ++ + + +Q R+ L DFQ+
Sbjct: 757 LGCDISKSPDLDLKCIAKETEAFVARDFTVLVDRAIHSSLSRQQNPTREGLTLTTADFQK 816
Query: 184 IYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSG 236
++ ++ W+ IGGL +++ ++ T + + L +R+G
Sbjct: 817 ALRGFLPASLRNVNLHKPRDLGWDKIGGLHEVRQILMDTIQLPAKYPELFANLPIRQRTG 876
Query: 237 LLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCV 296
+LLYGPPGTGKTL+A VA E MNF++++GPELL+KYIG SE+ +R+VF++A++A PC+
Sbjct: 877 ILLYGPPGTGKTLLAGVVARESGMNFISIQGPELLSKYIGASEQAVRDVFIRAQAAKPCI 936
Query: 297 VFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAIL 356
+FFDE +S+APRRG ++ +GV DRVV+QLL ++DGV Q V++L AT+R DL+DPA+L
Sbjct: 937 LFFDEFESIAPRRGHDN--TGVTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALL 994
Query: 357 RPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICS 416
RPGRLDK +Y D++S+L +L + + L+DDV L V +GAD+ ++
Sbjct: 995 RPGRLDKCVYCPP-PDQVSRLEILTVLSKSLPLADDVDLQH-VASVTESFTGADLKALLY 1052
Query: 417 NAWTRAIR 424
NA A++
Sbjct: 1053 NAQLEALQ 1060
>UNIPROTKB|E2QY79 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00570000079239 EMBL:AAEX03005293
EMBL:AAEX03005294 EMBL:AAEX03005295 EMBL:AAEX03005296
Ensembl:ENSCAFT00000025949 NextBio:20855189 Uniprot:E2QY79
Length = 851
Score = 530 (191.6 bits), Expect = 2.0e-50, P = 2.0e-50
Identities = 117/237 (49%), Positives = 159/237 (67%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VP+V+W DIG L ++ E IL+ R R GL +G+LL GPPG GKTL+AK
Sbjct: 568 TVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAK 627
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +ARS+APCV+FFDE+D+L PRR
Sbjct: 628 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-- 685
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 686 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 744
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + + L DV+L++L SGAD+ ++ A A+R+
Sbjct: 745 PADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 801
Score = 369 (135.0 bits), Expect = 6.1e-33, P = 6.1e-33
Identities = 104/315 (33%), Positives = 171/315 (54%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGL-SKLK- 216
K ++ +G NKR K+D Q+ +++ + A V V +ED+GG + LK
Sbjct: 215 KGRLRSKG-NKR---KKDVQEADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKE 270
Query: 217 -AEILSTFRG---VNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
++L R + + G+LL+GPPG GKTL+A A+A E + L V E+++
Sbjct: 271 VCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVS 330
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDG 332
G+SE+ +R +F +A S APCV+F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 331 GVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 388
Query: 333 VHTSQD---VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
++T+ V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 389 LNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 447
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII-TSAPQVKSAPVIVTM------ 442
+ L H P + GAD+ ++C A A+ R++ T Q + P + T+
Sbjct: 448 PETFPFRHLAHLTPGFV-GADLMALCREAAMCAVSRVLMTLQEQQPTDPEMGTLPSKGGQ 506
Query: 443 DDFLGACSLATAPDK 457
+D +G + PD+
Sbjct: 507 EDRVGTEPASETPDE 521
>UNIPROTKB|J9P5D7 [details] [associations]
symbol:NVL "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AAEX03005293 EMBL:AAEX03005294 EMBL:AAEX03005295
EMBL:AAEX03005296 Ensembl:ENSCAFT00000049264 Uniprot:J9P5D7
Length = 855
Score = 530 (191.6 bits), Expect = 2.1e-50, P = 2.1e-50
Identities = 117/237 (49%), Positives = 159/237 (67%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVN--RTSGLKR-SGLLLYGPPGTGKTLIAK 252
+VP+V+W DIG L ++ E IL+ R R GL +G+LL GPPG GKTL+AK
Sbjct: 573 TVPSVTWADIGALEDIREELTMAILAPVRSPEQFRALGLMTPAGVLLAGPPGCGKTLLAK 632
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +ARS+APCV+FFDE+D+L PRR
Sbjct: 633 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRARSSAPCVIFFDEVDALCPRRS-- 690
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D+ +G RVV+QLL EMDG+ Q VFI+ ATNR D++DPAILRPGRLDK+L+VGL
Sbjct: 691 DRETGASVRVVNQLLTEMDGLEARQQVFIMAATNRPDIIDPAILRPGRLDKTLFVGL-PP 749
Query: 373 RISQLGVLKAVVR---KFKLSDDVSLDSLVHHFPSQM-SGADIYSICSNAWTRAIRR 425
+L +LK + + + L DV+L++L SGAD+ ++ A A+R+
Sbjct: 750 PADRLAILKTITKNGTRPPLDADVNLEALAADLRCDCYSGADLSALVREASICALRQ 806
Score = 369 (135.0 bits), Expect = 6.2e-33, P = 6.2e-33
Identities = 108/327 (33%), Positives = 173/327 (52%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGL-SKLK- 216
K ++ +G NKR K+D Q+ +++ + A V V +ED+GG + LK
Sbjct: 215 KGRLRSKG-NKR---KKDVQEADGEIEGVLHKKAKAKGLELQVSRVKFEDVGGNDATLKE 270
Query: 217 -AEILSTFRG---VNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
++L R + + G+LL+GPPG GKTL+A A+A E + L V E+++
Sbjct: 271 VCKMLIHMRHPEVYHHLGAVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAATEVVS 330
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDG 332
G+SE+ +R +F +A S APCV+F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 331 GVSGESEQKLRELFEQAVSNAPCVLFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 388
Query: 333 VHTSQD---VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
++T+ V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 389 LNTTAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 447
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII-TSAPQVKSAPVIVTMDDFLGA 448
+ L H P + GAD+ ++C A A+ R++ T Q + P + T+
Sbjct: 448 PETFPFRHLAHLTPGFV-GADLMALCREAAMCAVSRVLMTLQEQQPTDPEMGTLP----- 501
Query: 449 CSLATAPDKFSQSVAPDNYSLSVAPEL 475
S D+ A + LSV EL
Sbjct: 502 -SKGGQEDRVGTEPASETPVLSVQDEL 527
>WB|WBGene00010562 [details] [associations]
symbol:cdc-48.3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0007091
"metaphase/anaphase transition of mitotic cell cycle" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0007067 "mitosis" evidence=IMP] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006469 "negative regulation of protein kinase activity"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0007052
GO:GO:0002119 GO:GO:0006469 GO:GO:0000003 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 HOGENOM:HOG000223225 GeneTree:ENSGT00700000104502
GO:GO:0007091 EMBL:Z75712 KO:K13525 PIR:T23322 RefSeq:NP_492211.1
ProteinModelPortal:Q21222 SMR:Q21222 PaxDb:Q21222
EnsemblMetazoa:K04G2.3 GeneID:172586 KEGG:cel:CELE_K04G2.3
UCSC:K04G2.3 CTD:172586 WormBase:K04G2.3 InParanoid:Q21222
OMA:QVAPTIV NextBio:876139 Uniprot:Q21222
Length = 724
Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
Identities = 114/235 (48%), Positives = 157/235 (66%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFRGVNR-TSGLKR------SGLLLYGPPGTGKTLIAKA 253
VPNVSW DIGG +LK EI + +R +G+LLYGPPG KTLIA+A
Sbjct: 453 VPNVSWNDIGGNEELKLEIQQAVIWPQKHPEAFERFGIDPPAGILLYGPPGCSKTLIARA 512
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A+E +MNFLAVKGPEL +K++G SE+ IR++F +AR AP +VFFDE+D++ RG E
Sbjct: 513 LASEAKMNFLAVKGPELFSKWVGDSEKAIRDLFSRARQVAPTIVFFDEIDAVGSSRGSE- 571
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+SSGV DRV++QLL E+DG+ S V +L ATNR D LD A+LRPGRLD+++YVGL
Sbjct: 572 KSSGVSDRVLAQLLTELDGLEKSSRVILLAATNRPDQLDSALLRPGRLDRAIYVGL-PCE 630
Query: 374 ISQLGVLKAVVRKFKLSDDV-SLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+++ +L+ +K K D V ++D LV S SGA++ ++C A A+R I
Sbjct: 631 VTRRAILEMRTKKMKFDDTVRTIDKLVEK-TSGYSGAELVAVCRTAAMFAMRESI 684
>ZFIN|ZDB-GENE-040426-2871 [details] [associations]
symbol:nvl "nuclear VCP-like" species:7955 "Danio
rerio" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-2871 GO:GO:0005524 HSSP:Q01853 GO:GO:0017111
KO:K14571 CTD:4931 HOVERGEN:HBG001226 EMBL:BC044464 IPI:IPI00503965
RefSeq:NP_998649.1 UniGene:Dr.2359 ProteinModelPortal:Q803I9
STRING:Q803I9 PRIDE:Q803I9 GeneID:406805 KEGG:dre:406805
NextBio:20818314 ArrayExpress:Q803I9 Bgee:Q803I9 Uniprot:Q803I9
Length = 796
Score = 524 (189.5 bits), Expect = 5.6e-50, P = 5.6e-50
Identities = 111/235 (47%), Positives = 155/235 (65%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGLKRS---GLLLYGPPGTGKTLIAK 252
+VP+V+W D+G L ++ E I++ + + L S GLLL GPPG GKTL+AK
Sbjct: 513 TVPDVTWADVGALQDVREELHMAIMAPIQNPEQFKALGLSAPAGLLLAGPPGCGKTLLAK 572
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA +NF++VKGPELLN Y+G+SE +R VF + R++APCV+FFDE+D+L PRR +
Sbjct: 573 AVANASGLNFISVKGPELLNMYVGESERAVRQVFQRGRNSAPCVIFFDEIDALCPRRSEH 632
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--Y 370
+ SG RVV+QLL EMDG+ + VFI+ ATNR D++DPA+LRPGRLDK+LYVGL
Sbjct: 633 E--SGASVRVVNQLLTEMDGMENRRQVFIMAATNRPDIIDPAVLRPGRLDKTLYVGLPPA 690
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ-MSGADIYSICSNAWTRAIR 424
DR + L + K +L DVSL+ + H + +GAD+ ++ A A+R
Sbjct: 691 ADRHAILNTITKGGTKPQLDSDVSLEEIAHDARCETFTGADLSALVREACVNALR 745
Score = 404 (147.3 bits), Expect = 8.5e-37, P = 8.5e-37
Identities = 109/356 (30%), Positives = 189/356 (53%)
Query: 130 GDYGFDASLVEYLSSVTSGF-ERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDL 188
GD G ++ L++ +S + D + RL + K +KQ K++ +ED +
Sbjct: 152 GDRGQESILIDLCEEESSSTTNQRDSS---RLEKEKKSVKQKRQKKNKLEEDSETSAGVP 208
Query: 189 QSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRSGL------LLYGP 242
+ + +V +ED GG + E+ + +R G+ LL+GP
Sbjct: 209 AKKSKVKGFELQFSSVKFEDFGGSDETLEEVCKLLIHMRHPEVYQRLGVVPPRGFLLHGP 268
Query: 243 PGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDEL 302
PG GKTL+A+AVA E + L + PEL++ G+SE+ +R +F +A S+APC++F DE+
Sbjct: 269 PGCGKTLLAQAVAGETALPLLKISAPELVSGVSGESEQKLRELFEQAISSAPCILFIDEI 328
Query: 303 DSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD---VFILGATNRVDLLDPAILRPG 359
D++ P+R E S + R+V+QLL MD +++ + V ++GATNR D LDPA+ R G
Sbjct: 329 DAITPKR--ETASKDMERRIVAQLLTCMDDLNSMLEPAQVLVIGATNRPDSLDPALRRAG 386
Query: 360 RLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAW 419
R D+ + +G+ D +++ +LK + RK +L DD L P + GAD+ ++C A
Sbjct: 387 RFDREICLGI-PDEGARMKILKTLCRKIRLPDDFDFRHLARLTPGYV-GADLMALCREAA 444
Query: 420 TRAIRRII---TSAPQVKSAPVIVTMDDFLGACSLATAPDKFSQ-SVAPDNYSLSV 471
A+ RI+ T+ Q+ + + D L + S++ + D+ + V ++S S+
Sbjct: 445 MNAVNRILLEPTTEDQITPTLALARLLDLLKS-SVSLSEDQLAALCVLMSDFSSSL 499
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 523 (189.2 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 118/238 (49%), Positives = 156/238 (65%)
Query: 203 NVSWEDIGGLSKLKAEILST-----FRGVNRTS-GLKRS-GLLLYGPPGTGKTLIAKAVA 255
NV+W+D+GGL ++K E+ T T GL S G+L YGPPGTGKTL+AKAVA
Sbjct: 483 NVTWDDVGGLDEIKEELKETVEYPVLHPDQYTKFGLSPSKGVLFYGPPGTGKTLLAKAVA 542
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE-DQ 314
TE NF++VKGPELL+ + G+SE NIR++F KAR+AAP VVF DELDS+A RG
Sbjct: 543 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSLGD 602
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ G DRVV+QLL EMDG++ ++VF++GATNR D +DPAILRPGRLD+ +YV L D
Sbjct: 603 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPAILRPGRLDQLIYVPL-PDEN 661
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
++L +L A +RK L + L ++ SGAD+ I A AI+ I + Q
Sbjct: 662 ARLSILNAQLRKTPLEPGLELTAIAKATQG-FSGADLLYIVQRAAKYAIKDSIEAHRQ 718
Score = 426 (155.0 bits), Expect = 4.1e-39, P = 4.1e-39
Identities = 122/364 (33%), Positives = 189/364 (51%)
Query: 104 LKTINVLPLTEPERRLLIQYQLDCLGGDYG--FDASLVEYLSSVTSGFERHDLTCLVRLS 161
L TI+ P + R+ + D + G G FD L Y + D
Sbjct: 109 LVTIHPCPDIKYATRISVLPIADTIEGITGNLFDVFLKPYFVEAYRPVRKGD-----HFV 163
Query: 162 VKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQ-LDAPSVPN----VSWEDIGGLSKLK 216
V+ M + D++ E++ + D + + ++ N V ++DIGG K
Sbjct: 164 VRGGMRQVEFKVVDVEPEEYAVVAQDTIIHWEGEPINREDEENNMNEVGYDDIGGCRKQM 223
Query: 217 AEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPE 269
A+I + + G+K G+L+YGPPGTGKTL+A+AVA E F + GPE
Sbjct: 224 AQIREMVELPLRHPQLFKAIGIKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPE 283
Query: 270 LLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDR-VVSQLLA 328
+++K G+SE N+R F +A AP ++F DE+DS+AP+R D+++G ++R VVSQLL
Sbjct: 284 VMSKMAGESESNLRKAFEEAEKNAPAIIFIDEIDSIAPKR---DKTNGEVERRVVSQLLT 340
Query: 329 EMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFK 388
MDG+ +V ++ ATNR + +DPA+ R GR D+ + +G+ D +L VL+ + K
Sbjct: 341 LMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGI-PDATGRLEVLRIHTKNMK 399
Query: 389 LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IITSAPQVKSAPVI----VT 441
L+DDV L++L + GADI S+CS A + IR +I A V+ VT
Sbjct: 400 LADDVDLEALAAETHGYV-GADIASLCSEAAMQQIREKMDLIDLDEDEIDAEVLDSLGVT 458
Query: 442 MDDF 445
MD+F
Sbjct: 459 MDNF 462
>MGI|MGI:1927170 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:1927170 GO:GO:0007275
GO:GO:0005739 GO:GO:0005524 GO:GO:0030154 GO:GO:0007283
eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 HSSP:Q9WZ49
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073
CTD:166378 HOVERGEN:HBG108504 OMA:NDIRPSA OrthoDB:EOG43FGWF
EMBL:AF049099 EMBL:AK011111 EMBL:AK144998 EMBL:AL669927
EMBL:AL627074 EMBL:AL645968 IPI:IPI00649667 RefSeq:NP_001156983.1
RefSeq:NP_067318.2 UniGene:Mm.172679 ProteinModelPortal:Q3UMC0
SMR:Q3UMC0 PhosphoSite:Q3UMC0 PaxDb:Q3UMC0 PRIDE:Q3UMC0
Ensembl:ENSMUST00000029277 Ensembl:ENSMUST00000108112 GeneID:57815
KEGG:mmu:57815 UCSC:uc008pau.2 InParanoid:Q3UMC0 NextBio:314006
Bgee:Q3UMC0 Genevestigator:Q3UMC0 Uniprot:Q3UMC0
Length = 893
Score = 523 (189.2 bits), Expect = 1.5e-49, P = 1.5e-49
Identities = 112/255 (43%), Positives = 159/255 (62%)
Query: 180 DFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGL 232
DF Q +D++ ++ A VPNVSW DIGGL +K ++ L + NR
Sbjct: 601 DFLQGMNDIRPSAMREV-AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFNRMGIQ 659
Query: 233 KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
G+LLYGPPG KT+IAKA+A E +NFLA+KGPEL+NKY+G+SE +R +F KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
AP ++FFDELD+LA RG + V DRV++QLL EMDG+ ++V +L ATNR D +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
A++RPGR+D+ +YV L D ++ +L +S++V LD LV + SGA+I
Sbjct: 780 KALMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNEVDLDELVLQTDTY-SGAEII 837
Query: 413 SICSNAWTRAIRRII 427
++C A A+ I
Sbjct: 838 AVCKEAALLALEENI 852
Score = 388 (141.6 bits), Expect = 6.2e-35, P = 6.2e-35
Identities = 97/258 (37%), Positives = 152/258 (58%)
Query: 204 VSWEDIGGL-SKLKA--EILST---FRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGL S+LKA EI+ + ++ G+ GLLLYGPPGTGKT+IA+AVA
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E S
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQS 467
Query: 317 GVMDRVVSQLLAEMDGVHTSQD---VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ + V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQ 527
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+L +L+ ++R+ L L L ++ + GAD+ ++C+ A A+RR++ P
Sbjct: 528 -DRLDILQKLLRRVPHLLTKAELLRLANNAHGYV-GADLKALCNEAGLHALRRVLRKQPN 585
Query: 433 VKSAPVI----VTMDDFL 446
+ + V +T++DFL
Sbjct: 586 LPDSKVAGMVKITLNDFL 603
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 519 (187.8 bits), Expect = 1.7e-49, P = 1.7e-49
Identities = 114/263 (43%), Positives = 172/263 (65%)
Query: 200 SVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GLKR-SGLLLYGPPGTGKTLIAK 252
+VP VSW +IG L ++ E+ ++ + + R G+ +G+LL+GPPG GKTL+AK
Sbjct: 485 TVPGVSWNNIGALKSIRVELQMAIVQPIKRPELYQSVGISAPTGVLLWGPPGCGKTLLAK 544
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E + NF++++GPELLNKY+G+SE +R VFL+AR+++PCV+FFDELD++ PRR +
Sbjct: 545 AVANESKANFISIRGPELLNKYVGESERAVRQVFLRARASSPCVIFFDELDAMVPRR--D 602
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
D S RVV+ LL E+DG+ V+++ ATNR D++DPA+LRPGRLDK+L V L D
Sbjct: 603 DSLSEASSRVVNTLLTELDGLSDRSGVYVIAATNRPDIIDPAMLRPGRLDKTLLVDL-PD 661
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFP-SQMSGADIYSICSNAWTRAIRR-----I 426
++ +LK + ++ L ++V+LD L S SGAD+ ++ A A+R I
Sbjct: 662 AHERVEILKTLTKQTPLHEEVNLDVLGRDERCSNFSGADLAALVREAAVTALRSAVFADI 721
Query: 427 ITSAPQVK--SA--PVIVTMDDF 445
++ P++ SA P+ VT DF
Sbjct: 722 ASNEPEITQHSALEPIRVTNADF 744
Score = 330 (121.2 bits), Expect = 1.4e-27, P = 1.4e-27
Identities = 102/352 (28%), Positives = 179/352 (50%)
Query: 95 IRKQI-QKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYG--FDASLVEYLS------SV 145
I+K I +K+ K ++ L E E +L L + D D++L+E S+
Sbjct: 56 IKKPILEKVVEKVLDTLK-AEVEEKLASSQDLVLVDSDMEEQSDSNLMEVKDTNVINKSI 114
Query: 146 TSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVS 205
TS + +L + K + ++ I +K+ + + + + PS ++S
Sbjct: 115 TSLWSSPNLKEIDGEDEKKSVGQESITGSAKRKDRRSKTNGSKRQKAEANREPPS--DIS 172
Query: 206 WEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVATEC 258
DIGGL E+L V + +G+ G+LL+GPPG GKT++A A+A E
Sbjct: 173 LSDIGGLDDCINELLELVAMPIKHPEVYQYTGIHPPRGVLLHGPPGCGKTMLANALANEL 232
Query: 259 RMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGV 318
+ F+++ P +++ G+SE+ +R VF +A+S APC++F DE+D++ P+R E +
Sbjct: 233 GVPFISISAPSIVSGMSGESEKKVREVFEEAKSLAPCLMFIDEIDAVTPKR--ESAQREM 290
Query: 319 MDRVVSQLLAEMDGVH----TSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
R+V+Q L MD + + V ++GATNR D LD A+ R GR D+ + + + +
Sbjct: 291 ERRIVAQFLTCMDELSFEKTDGKPVLVIGATNRPDSLDSALRRAGRFDREICLTV-PSQD 349
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
++ +L+ + + KLS D L P + GAD+ ++ + A AI+RI
Sbjct: 350 AREKILRTMAKGLKLSGDFDFRQLAKQTPGYV-GADLKALTAAAGIIAIKRI 400
>UNIPROTKB|E2RC37 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 CTD:166378 OMA:NDIRPSA
EMBL:AAEX03011797 RefSeq:XP_540960.2 ProteinModelPortal:E2RC37
Ensembl:ENSCAFT00000006393 GeneID:483840 KEGG:cfa:483840
Uniprot:E2RC37
Length = 893
Score = 520 (188.1 bits), Expect = 3.3e-49, P = 3.3e-49
Identities = 111/255 (43%), Positives = 160/255 (62%)
Query: 180 DFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR------TSGLK 233
DF Q +D++ ++ A VPNVSW DIGGL +K ++ + G++
Sbjct: 601 DFLQGMNDIRPSAMREV-AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFIRMGIQ 659
Query: 234 R-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
G+LLYGPPG KT+IAKA+A E +NFLA+KGPEL+NKY+G+SE +R +F KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARAV 719
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
+P ++FFDELD+LA RG + V DRV++QLL EMDG+ +DV IL ATNR D +D
Sbjct: 720 SPSIIFFDELDALAIERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRID 779
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
A++RPGR+D+ +YV L D ++ +L +S+DV+LD L+ + SGA+I
Sbjct: 780 KALMRPGRIDRIIYVPL-PDAATRREILNLQFHSMPISNDVNLDELIFQTDTY-SGAEII 837
Query: 413 SICSNAWTRAIRRII 427
++C A A+ I
Sbjct: 838 AVCREAALLALEEDI 852
Score = 384 (140.2 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 97/258 (37%), Positives = 157/258 (60%)
Query: 204 VSWEDIGGLS-KLKA--EILST---FRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGLS +LKA EI+ + ++ G+ G+LLYGPPGTGKT+IA+AVA
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 409
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E +
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 467
Query: 317 GVMDRVVSQLLAEMDGVHT--SQ-DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ + S+ V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGV-PNA 526
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+L +L+ ++++ L +V L L + + GAD+ ++C+ A A+RR++ P
Sbjct: 527 ADRLDILQKLLQRVPHLLTEVELLQLANSAHGYV-GADLKALCNEAGLYALRRVLNKQPN 585
Query: 433 V---KSAPVI-VTMDDFL 446
+ K A ++ +T++DFL
Sbjct: 586 LSDSKMAGLVKITLNDFL 603
>UNIPROTKB|I3LPI5 [details] [associations]
symbol:PEX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060152 "microtubule-based peroxisome localization"
evidence=IEA] [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0016558
"protein import into peroxisome matrix" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005778
GO:GO:0016558 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 GO:GO:0060152 PANTHER:PTHR23077:SF12 OMA:HSWEKEK
InterPro:IPR015343 Pfam:PF09263 GeneTree:ENSGT00550000075032
EMBL:FP565472 Ensembl:ENSSSCT00000022601 Uniprot:I3LPI5
Length = 1286
Score = 523 (189.2 bits), Expect = 4.8e-49, P = 4.8e-49
Identities = 128/356 (35%), Positives = 208/356 (58%)
Query: 93 VLIRKQIQKLFLKTINVLPLTEPER-RLL---IQYQLDCLGGDYGFDASLVEYLSSVTSG 148
+L+ Q LF ++ P + +R +L I+ +LDC + D L + ++ T G
Sbjct: 724 LLVSAQGIHLFQCVQHIQPPDQEQRCEILHNAIKNKLDCDMNSFT-DLDL-KRIAKETEG 781
Query: 149 FERHDLTCLVRLSVKNKMLKQGINKRD---LQKEDFQQIYDDLQSRYSDQLDAPSVPNVS 205
F D LV ++ +++ Q ++ R+ L DFQ+ ++ ++
Sbjct: 782 FVARDFIVLVDRAIHSRLSNQSVSTREELVLTTLDFQKALQGFVPASLRNVNLHKPRDLG 841
Query: 206 WEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVATEC 258
W+ IGGL +++ ++ T + + L +R+G+LLYGPPGTGKTL+A VA E
Sbjct: 842 WDHIGGLREVRQILMDTIQLPAKYPELFANLPIRQRTGVLLYGPPGTGKTLLAGVVARES 901
Query: 259 RMNFLAVK-GPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSG 317
M L ++ GPELL+KYIG SE+ +R++F++A++A PC++FFDE +S+APRRG ++ +G
Sbjct: 902 GMILLVLRYGPELLSKYIGASEQAVRDIFIRAQAAKPCILFFDEFESIAPRRGHDN--TG 959
Query: 318 VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQL 377
V DRVV+QLL ++DGV Q V++L AT+R DL+DPA+LRPGRLDK +Y D++S+L
Sbjct: 960 VTDRVVNQLLTQLDGVEGLQGVYVLAATSRPDLIDPALLRPGRLDKCVYCPP-PDQVSRL 1018
Query: 378 GVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR-RIITSAPQ 432
+L + L++DV L V +GAD+ ++ NA A+ R+++ Q
Sbjct: 1019 EILNVLSASLPLAEDVDLQH-VASLTDSFTGADLKALLYNAQLEALHGRLLSCGLQ 1073
>UNIPROTKB|Q8NB90 [details] [associations]
symbol:SPATA5 "Spermatogenesis-associated protein 5"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
GO:GO:0007275 GO:GO:0005739 GO:GO:0005524 GO:GO:0005737
GO:GO:0030154 GO:GO:0007283 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 KO:K14575 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 EMBL:AC021205
EMBL:AF361489 EMBL:AF479656 EMBL:AK091384 EMBL:AC026402
EMBL:AC097492 EMBL:AC109357 EMBL:BC048217 IPI:IPI00329583
IPI:IPI00890715 IPI:IPI00890727 RefSeq:NP_660208.2
UniGene:Hs.709648 ProteinModelPortal:Q8NB90 SMR:Q8NB90
IntAct:Q8NB90 STRING:Q8NB90 PhosphoSite:Q8NB90 DMDM:308153554
PaxDb:Q8NB90 PRIDE:Q8NB90 DNASU:166378 Ensembl:ENST00000274008
GeneID:166378 KEGG:hsa:166378 UCSC:uc003iey.3 UCSC:uc003iez.4
CTD:166378 GeneCards:GC04P123844 H-InvDB:HIX0022056 HGNC:HGNC:18119
HPA:HPA036451 MIM:613940 neXtProt:NX_Q8NB90 PharmGKB:PA38294
HOVERGEN:HBG108504 InParanoid:Q8NB90 OMA:NDIRPSA OrthoDB:EOG43FGWF
PhylomeDB:Q8NB90 GenomeRNAi:166378 NextBio:88589 Bgee:Q8NB90
CleanEx:HS_SPATA5 Genevestigator:Q8NB90 Uniprot:Q8NB90
Length = 893
Score = 516 (186.7 bits), Expect = 8.9e-49, P = 8.9e-49
Identities = 119/282 (42%), Positives = 169/282 (59%)
Query: 156 CLVRLSVKNKMLKQGINKRDLQK---EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGL 212
C +R +K + + L K +DF Q +D++ ++ A VPNVSW DIGGL
Sbjct: 574 CALRRILKKQPNLPDVKVAGLVKITLKDFLQAMNDIRPSAMREI-AIDVPNVSWSDIGGL 632
Query: 213 S--KLKAEILSTFRGVNRTSGLKRS-----GLLLYGPPGTGKTLIAKAVATECRMNFLAV 265
KLK E + + S ++ G+LLYGPPG KT+IAKA+A E +NFLA+
Sbjct: 633 ESIKLKLEQAVEWPLKHPESFIRMGIQPPKGVLLYGPPGCSKTMIAKALANESGLNFLAI 692
Query: 266 KGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQ 325
KGPEL+NKY+G+SE +R F KAR+ AP ++FFDELD+LA RG + V DRV++Q
Sbjct: 693 KGPELMNKYVGESERAVRETFRKARAVAPSIIFFDELDALAVERGSSLGAGNVADRVLAQ 752
Query: 326 LLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVR 385
LL EMDG+ +DV IL ATNR D +D A++RPGR+D+ +YV L D ++ + K
Sbjct: 753 LLTEMDGIEQLKDVTILAATNRPDRIDKALMRPGRIDRIIYVPL-PDAATRREIFKLQFH 811
Query: 386 KFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
+S++V LD L+ + SGA+I ++C A A+ I
Sbjct: 812 SMPVSNEVDLDELILQTDAY-SGAEIVAVCREAALLALEEDI 852
Score = 383 (139.9 bits), Expect = 2.1e-34, P = 2.1e-34
Identities = 100/260 (38%), Positives = 155/260 (59%)
Query: 204 VSWEDIGGLS-KLKA--EILST---FRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGLS +LKA EI+ + ++ G+ G+LLYGPPGTGKT+IA+AVA
Sbjct: 350 VTYDMIGGLSSQLKAIREIIELPLKQPELFKSYGIPAPRGVLLYGPPGTGKTMIARAVAN 409
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E +
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEAKLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 467
Query: 317 GVMDRVVSQLLAEMDGV--HTSQ-DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ S+ V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEVSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQ 527
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIIT---S 429
+L +L+ ++R+ L + L L + + GAD+ +C+ A A+RRI+ +
Sbjct: 528 -DRLDILQKLLRRVPHLLTEAELLQLANSAHGYV-GADLKVLCNEAGLCALRRILKKQPN 585
Query: 430 APQVKSAPVI-VTMDDFLGA 448
P VK A ++ +T+ DFL A
Sbjct: 586 LPDVKVAGLVKITLKDFLQA 605
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 515 (186.3 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 111/242 (45%), Positives = 159/242 (65%)
Query: 200 SVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTSGLKR------SGLLLYGPPGTGKTLIAK 252
+VP+ +W+DIG L K++ E+ L+ V L+R SG+LL GPPG GKTL+AK
Sbjct: 655 TVPDTTWDDIGALEKIREELKLAVLAPVKYPEMLERLGLTAPSGVLLCGPPGCGKTLLAK 714
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR--G 310
A+A E +NF++VKGPEL+N Y+G+SE +R F +AR++APCV+FFDE DSL P+R G
Sbjct: 715 AIANEAGINFISVKGPELMNMYVGESERAVRACFQRARNSAPCVIFFDEFDSLCPKRSDG 774
Query: 311 QEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY 370
+ +SG R+V+QLL EMDGV + V+IL ATNR D++DPAILRPGRLD LYVG +
Sbjct: 775 GDGNNSGT--RIVNQLLTEMDGVEERKGVYILAATNRPDIIDPAILRPGRLDTILYVG-F 831
Query: 371 EDRISQLGVLKAVVRKFK---LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
++ + +LKA + K L+DDV LD + +GAD+ + A ++R+ +
Sbjct: 832 PEQSERTEILKATTKNGKRPVLADDVDLDEIAAQTEGY-TGADLAGLVKQASMFSLRQSL 890
Query: 428 TS 429
+
Sbjct: 891 NN 892
Score = 307 (113.1 bits), Expect = 1.7e-24, P = 1.7e-24
Identities = 90/283 (31%), Positives = 150/283 (53%)
Query: 181 FQQIYDDLQSR-----YSDQLDAPSVPNVSWEDIGGL-SKLK--AEILSTFRGVNR--TS 230
+QQ++ + QSR + L+ P S+ DIGG+ S LK E+L +
Sbjct: 222 YQQLHQN-QSRDRLRKFKRDLEVQH-PTESFRDIGGMDSTLKELCEMLIHIKSPEFYFQL 279
Query: 231 GLKRS-GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKA 289
GL S GLLL+GPPG GKT +A+A++ + +M + + EL+ G+SEE IR VF +A
Sbjct: 280 GLLPSRGLLLHGPPGCGKTFLARAISGQLKMPLMEIPATELIGGISGESEERIREVFDQA 339
Query: 290 RSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTS---QDVFILGATN 346
+PCV+F DE+D++ R + S + R+VSQL++ +D + + Q V ++ AT
Sbjct: 340 IGYSPCVLFIDEIDAIGGNR--QWASKDMERRIVSQLISSLDNLKANEFGQSVVVIAATT 397
Query: 347 RVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQM 406
R D+LDP + R GR D + + + R + +L+ + ++ D + P +
Sbjct: 398 RPDVLDPGLRRIGRFDHEIAIHI-PSRKERREILRIQCEGLSVDPKLNYDKIAELTPGYV 456
Query: 407 SGADIYSICSNAWTRAI-RRIITSAPQVKSAP----VIVTMDD 444
GAD+ ++ S A + A+ RR + ++ +A VT+DD
Sbjct: 457 -GADLMALVSRAASVAVKRRSMKKFRELHAASEKNMTTVTLDD 498
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 510 (184.6 bits), Expect = 2.7e-48, P = 2.7e-48
Identities = 115/240 (47%), Positives = 157/240 (65%)
Query: 203 NVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVA 255
NV+W+DIGGL +K E+ T + GL + G+L +GPPGTGKTL+AKAVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG-QEDQ 314
TE NF++VKGPELL+ + G+SE NIR++F KAR+AAP VVF DELDS+A RG
Sbjct: 544 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGD 603
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ G DRVV+QLL EMDG++ ++VF++GATNR D +DPA+LRPGRLD+ +YV L D
Sbjct: 604 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEP 662
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
++L +L+A +R L + L+ + SGAD+ I + AI+ I + QVK
Sbjct: 663 ARLSILQAQLRNTPLEPGLDLNEIAK-ITHGFSGADLSYIVQRSAKFAIKDSIEA--QVK 719
Score = 416 (151.5 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 92/233 (39%), Positives = 145/233 (62%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + ++ G+K G+L+YGPPGTGKT++A+
Sbjct: 208 SLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMAR 267
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A +P ++F DE+DS+AP+R
Sbjct: 268 AVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--- 324
Query: 313 DQSSGVMDR-VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
D+++G ++R VVSQLL MDG+ +V ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 325 DKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGV-P 383
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D +L +L+ + KL+DDV L+++ + GADI S+CS A + IR
Sbjct: 384 DAEGRLEILRIHTKNMKLADDVDLEAIASETHGFV-GADIASLCSEAAMQQIR 435
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 510 (184.6 bits), Expect = 2.7e-48, P = 2.7e-48
Identities = 115/240 (47%), Positives = 157/240 (65%)
Query: 203 NVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVA 255
NV+W+DIGGL +K E+ T + GL + G+L +GPPGTGKTL+AKAVA
Sbjct: 484 NVTWDDIGGLDNIKNELKETVEYPVLHPDQYQKFGLAPTKGVLFFGPPGTGKTLLAKAVA 543
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRG-QEDQ 314
TE NF++VKGPELL+ + G+SE NIR++F KAR+AAP VVF DELDS+A RG
Sbjct: 544 TEVSANFISVKGPELLSMWYGESESNIRDIFDKARAAAPTVVFLDELDSIAKARGGSHGD 603
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ G DRVV+QLL EMDG++ ++VF++GATNR D +DPA+LRPGRLD+ +YV L D
Sbjct: 604 AGGASDRVVNQLLTEMDGMNAKKNVFVIGATNRPDQIDPALLRPGRLDQLIYVPL-PDEP 662
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
++L +L+A +R L + L+ + SGAD+ I + AI+ I + QVK
Sbjct: 663 ARLSILQAQLRNTPLEPGLDLNEIAK-ITHGFSGADLSYIVQRSAKFAIKDSIEA--QVK 719
Score = 416 (151.5 bits), Expect = 4.8e-38, P = 4.8e-38
Identities = 92/233 (39%), Positives = 145/233 (62%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAK 252
S+ V ++DIGG K A+I + ++ G+K G+L+YGPPGTGKT++A+
Sbjct: 208 SLNEVGYDDIGGCKKQMAQIRELVELPLRHPQLFKSIGIKPPKGILMYGPPGTGKTIMAR 267
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E F + GPE+++K G+SE N+R F +A +P ++F DE+DS+AP+R
Sbjct: 268 AVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEAEKNSPSIIFIDEIDSIAPKR--- 324
Query: 313 DQSSGVMDR-VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
D+++G ++R VVSQLL MDG+ +V ++ ATNR + +DPA+ R GR D+ + +G+
Sbjct: 325 DKTNGEVERRVVSQLLTLMDGMKARSNVVVIAATNRPNSIDPALRRFGRFDREVDIGV-P 383
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D +L +L+ + KL+DDV L+++ + GADI S+CS A + IR
Sbjct: 384 DAEGRLEILRIHTKNMKLADDVDLEAIASETHGFV-GADIASLCSEAAMQQIR 435
>DICTYBASE|DDB_G0278435 [details] [associations]
symbol:DDB_G0278435 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0278435 GO:GO:0005524 EMBL:AAFI02000023
GO:GO:0016887 eggNOG:COG0464 KO:K14575 InterPro:IPR009010
SUPFAM:SSF50692 RefSeq:XP_642364.1 ProteinModelPortal:Q54Y38
EnsemblProtists:DDB0237527 GeneID:8621569 KEGG:ddi:DDB_G0278435
InParanoid:Q54Y38 OMA:TSICREA Uniprot:Q54Y38
Length = 886
Score = 457 (165.9 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 101/236 (42%), Positives = 146/236 (61%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFRGVNR------TSGLKR-SGLLLYGPPGTGKTLIAKA 253
+P V W DIGG +K ++ + G+K G+LLYGPPG KTL+AKA
Sbjct: 616 IPKVFWGDIGGQEHIKQKLKEAIEWPLKYPQSFIRMGIKPPKGILLYGPPGCSKTLLAKA 675
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+ATE +NF+AVKGPELL+K++G+SE +R++F KAR +P ++FFDE+D LA R E
Sbjct: 676 LATESGLNFIAVKGPELLSKWVGESERAVRDIFKKARQNSPSILFFDEIDGLAISRSGE- 734
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
SG ++RVVSQLL EMDG+ +V I+GATNR D++D AILR GR+D+ LY+ D
Sbjct: 735 -GSGAVERVVSQLLTEMDGIQPLTNVTIIGATNRPDIIDKAILRAGRIDRILYISP-PDL 792
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
++ + ++K S D+ ++ L SGA++ SIC A A++ I +
Sbjct: 793 DARKEIFNIHLKKVPHSSDIDINQL-SILTDGYSGAEVTSICREASIAAMKEDINA 847
Score = 266 (98.7 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 58/153 (37%), Positives = 95/153 (62%)
Query: 193 SDQLDAPSVPNVSWEDIGGLSKLKAEI-----LSTFR-GVNRTSGLKR-SGLLLYGPPGT 245
++++D N++++ IGGL +I LS ++ + ++ G+K G+LLYGPPGT
Sbjct: 298 NNKIDNNKNINLNFQSIGGLDLQVKQIRELIDLSFYKLDLLKSFGVKPPKGILLYGPPGT 357
Query: 246 GKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSL 305
GKTL+A+ VAT+ + G ++L+K+ G +E+ ++ +F A +P ++F DELD+L
Sbjct: 358 GKTLLARIVATQTNATLFTINGADILDKFYGMTEKTLQKIFKDAAQKSPSIIFIDELDAL 417
Query: 306 APRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD 338
P+R ED SS V R+V LL MDGV ++ D
Sbjct: 418 CPKR--EDNSSEVEKRIVGSLLTLMDGVVSTSD 448
Score = 107 (42.7 bits), Expect = 1.5e-27, Sum P(3) = 1.5e-27
Identities = 28/91 (30%), Positives = 45/91 (49%)
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGL--YEDRISQLGVLKAVVRKFKLSDDVSL- 395
V ++G TNR D +D A+ RPGR D + + + + R L + + + S ++++
Sbjct: 469 VIVIGCTNRPDSIDSALRRPGRFDNEIEISIPNQQGREQILNIFLSKIPNQLTSQEIAMI 528
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
S H F GADI S+C A + RI
Sbjct: 529 ASKTHGFV----GADIESLCKEASLKCFNRI 555
Score = 51 (23.0 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 16/42 (38%), Positives = 20/42 (47%)
Query: 40 LKKYNLDIFKYDEVNYL-CNVK---YVYFKLCSFDSVNVKSN 77
L+K + + D + CNVK YVY F SVN SN
Sbjct: 100 LQKLSTQHIQLDSIQRENCNVKIGDYVYLFKTPFQSVNTVSN 141
Score = 48 (22.0 bits), Expect = 4.3e-48, Sum P(3) = 4.3e-48
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 96 RKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLT 155
R+QI +FL I LT E ++ +GF + +E L S L
Sbjct: 505 REQILNIFLSKIPN-QLTSQEIAMIASKT-------HGFVGADIESLCKEAS------LK 550
Query: 156 CLVRLSVKNKMLKQGIN--KRDLQKEDFQQIYDDLQSRYS 193
C R+ +N+ L Q IN K + KE+ Q+ ++LQ+ S
Sbjct: 551 CFNRIKNENQKLFQSINIEKEEKGKEEKQE--ENLQNLLS 588
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 505 (182.8 bits), Expect = 6.4e-48, P = 6.4e-48
Identities = 125/320 (39%), Positives = 183/320 (57%)
Query: 120 LIQYQLDCLGGD-YGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINK-RDLQ 177
++ Q + D + D+ ++Y++S T G+ DLT L R SV K +++G+ ++
Sbjct: 422 ILTKQFSRMSSDRHVLDSEAIKYIASKTHGYVGADLTALCRESVM-KTIQRGLGTDANID 480
Query: 178 KEDFQQIYDDLQSRYSDQLDAP------SVPNVSWEDIGGLSKLKA---EILSTFRGVNR 228
K + D++S D + +P V W DIGG +LK E++ +
Sbjct: 481 KFSLKVTLKDVESAMVDIRPSAMREIFLEMPKVYWSDIGGQEELKTKMKEMIQLPLEASE 540
Query: 229 TS---GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRN 284
T G+ G+LLYGPPG KTL AKA+ATE +NFLAVKGPE+ NKY+G+SE IR
Sbjct: 541 TFARLGISAPKGVLLYGPPGCSKTLTAKALATESGINFLAVKGPEIFNKYVGESERAIRE 600
Query: 285 VFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGA 344
+F KARSAAP ++FFDE+D+L+P R + S+ + V++ LL E+DGV + V I+ A
Sbjct: 601 IFRKARSAAPSIIFFDEIDALSPDR--DGSSTSAANHVLTSLLNEIDGVEELKGVVIVAA 658
Query: 345 TNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDD-VSLDSLVHHFP 403
TNR D +D A+LRPGRLD+ +YVG D ++L +LK +KF + V L L
Sbjct: 659 TNRPDEIDAALLRPGRLDRHIYVGP-PDVNARLEILKKCTKKFNTEESGVDLHELADRTE 717
Query: 404 SQMSGADIYSICSNAWTRAI 423
SGA++ +C A AI
Sbjct: 718 GY-SGAEVVLLCQEAGLAAI 736
Score = 352 (129.0 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 85/252 (33%), Positives = 141/252 (55%)
Query: 204 VSWEDIGGLSK----LKAEILSTFRGVNRTSGLKRS---GLLLYGPPGTGKTLIAKAVAT 256
+S+ +GGL K LK+ I S S G+LL+GPPGTGKT++ + VA
Sbjct: 242 LSYAAVGGLDKEIESLKSAIEIPLHQPTLFSSFGVSPPRGILLHGPPGTGKTMLLRVVAN 301
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
+ L + GP +++KY+G++E +R++F +AR P ++F DE+DS+AP R +D S
Sbjct: 302 TSNAHVLTINGPSIVSKYLGETEAALRDIFNEARKYQPSIIFIDEIDSIAPNRANDD-SG 360
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
V RVV+ LL MDG+ + V ++ ATNR + +DPA+ RPGR D+ + +G+ D ++
Sbjct: 361 EVESRVVATLLTLMDGMGAAGKVVVIAATNRPNSVDPALRRPGRFDQEVEIGI-PDVDAR 419
Query: 377 LGVLKAVVRKFKLSDDVSLDS-LVHHFPSQMSG---ADIYSICSNAWTRAIRRIITSAPQ 432
+L + SD LDS + + S+ G AD+ ++C + + I+R + +
Sbjct: 420 FDILTKQFSRMS-SDRHVLDSEAIKYIASKTHGYVGADLTALCRESVMKTIQRGLGTDAN 478
Query: 433 VKSAPVIVTMDD 444
+ + VT+ D
Sbjct: 479 IDKFSLKVTLKD 490
>CGD|CAL0000102 [details] [associations]
symbol:RIX7 species:5476 "Candida albicans" [GO:0030448
"hyphal growth" evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0030687 "preribosome, large subunit precursor" evidence=IEA]
[GO:0000055 "ribosomal large subunit export from nucleus"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0044011 "single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 505 (182.8 bits), Expect = 9.6e-48, P = 9.6e-48
Identities = 107/281 (38%), Positives = 176/281 (62%)
Query: 200 SVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GLKR-SGLLLYGPPGTGKTLIAK 252
++P+V+W+++G L K++ E+ + + + + G+ +G+L++GPPG GKTL+AK
Sbjct: 515 TIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAK 574
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E R NF+++KGPELLNKY+G+SE+ +R VF +AR++ PC++FFDELD+L PRR
Sbjct: 575 AVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTS 634
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S RVV+ LL E+DG++ + VF++GATNR D++DPA+LRPGRLDK+LY+ L
Sbjct: 635 MSESS--SRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTP 692
Query: 373 RISQLGVLKAVVRKFK--LSDDVSLDSLVHHFP-SQMSGADIYSICSNAWTRAIRRIITS 429
+L +LK +VR L +V L+++ SGAD+ S+ A A+++
Sbjct: 693 E-ERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQ 751
Query: 430 APQVKSAPVIVTMDDFLGACSLATAPDKFSQSVAPDNYSLS 470
+++ +D +G ++ + F +++ S+S
Sbjct: 752 NQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVS 792
Score = 334 (122.6 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 82/262 (31%), Positives = 144/262 (54%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S PN+ +GG+ + ++L + ++G++ G+LLYGPPG GKT IA
Sbjct: 186 STPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIAN 245
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A+A E ++ F+ + P +++ G+SE+ +R +F +A+ APC++F DE+D++ P+R
Sbjct: 246 ALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGG 305
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQD----VFILGATNRVDLLDPAILRPGRLDKSLYVG 368
Q + R+V+QLL MD + + V ++GATNR D LD A+ R GR D+ + +
Sbjct: 306 AQRE-MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLN 364
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLD--SLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+ + ++ +LKA+ + KL + + L P + GAD+ S+ + A AI+RI
Sbjct: 365 VPNEE-QRISILKAMTKNIKLENGEHFNYRELSKLTPGYV-GADLKSLVTAAGISAIKRI 422
Query: 427 ITSAPQVKSAPVIVTMDDFLGA 448
+ +++ V DD + A
Sbjct: 423 FETMSELQEESHSVK-DDSMDA 443
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 432 QVKSAPVIVTMDDFLGAC-SLATAPDKFSQSVAPD 465
Q + AP+ +T DF+ A S+ + + + PD
Sbjct: 484 QEQLAPLAITYQDFVNALPSVQPSAKREGFATIPD 518
>UNIPROTKB|Q5AGG2 [details] [associations]
symbol:RIX7 "Putative uncharacterized protein"
species:237561 "Candida albicans SC5314" [GO:0030448 "hyphal
growth" evidence=IMP] [GO:0044011 "single-species biofilm formation
on inanimate substrate" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0000102 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 GO:GO:0030448 GO:GO:0044011 EMBL:AACQ01000021
EMBL:AACQ01000022 KO:K14571 RefSeq:XP_720530.1 RefSeq:XP_720658.1
ProteinModelPortal:Q5AGG2 STRING:Q5AGG2 GeneID:3637615
GeneID:3637735 KEGG:cal:CaO19.11695 KEGG:cal:CaO19.4219
Uniprot:Q5AGG2
Length = 827
Score = 505 (182.8 bits), Expect = 9.6e-48, P = 9.6e-48
Identities = 107/281 (38%), Positives = 176/281 (62%)
Query: 200 SVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GLKR-SGLLLYGPPGTGKTLIAK 252
++P+V+W+++G L K++ E+ + + + + G+ +G+L++GPPG GKTL+AK
Sbjct: 515 TIPDVTWQNVGALFKIRMELHMCIVQPIKKPELYLKVGIAAPAGVLMWGPPGCGKTLLAK 574
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E R NF+++KGPELLNKY+G+SE+ +R VF +AR++ PC++FFDELD+L PRR
Sbjct: 575 AVANESRANFISIKGPELLNKYVGESEKAVRQVFQRARASTPCIIFFDELDALVPRRDTS 634
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S RVV+ LL E+DG++ + VF++GATNR D++DPA+LRPGRLDK+LY+ L
Sbjct: 635 MSESS--SRVVNTLLTELDGLNDRKGVFVIGATNRPDMIDPAMLRPGRLDKTLYIELPTP 692
Query: 373 RISQLGVLKAVVRKFK--LSDDVSLDSLVHHFP-SQMSGADIYSICSNAWTRAIRRIITS 429
+L +LK +VR L +V L+++ SGAD+ S+ A A+++
Sbjct: 693 E-ERLEILKTLVRTSNSPLHANVDLNAISRDSRCGNFSGADLSSLVKEAGVWALKKRFFQ 751
Query: 430 APQVKSAPVIVTMDDFLGACSLATAPDKFSQSVAPDNYSLS 470
+++ +D +G ++ + F +++ S+S
Sbjct: 752 NQKIQELDSSGFYEDSIGEDDISITAEDFDHALSSIRPSVS 792
Score = 334 (122.6 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 82/262 (31%), Positives = 144/262 (54%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAK 252
S PN+ +GG+ + ++L + ++G++ G+LLYGPPG GKT IA
Sbjct: 186 STPNIDLSSLGGVESVTTQLLEIIGLPILHPEIYSSTGVEPPRGVLLYGPPGCGKTTIAN 245
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A+A E ++ F+ + P +++ G+SE+ +R +F +A+ APC++F DE+D++ P+R
Sbjct: 246 ALAGELKVPFINISAPSVVSGMSGESEKKLREIFEEAKQIAPCLIFMDEIDAITPKRDGG 305
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQD----VFILGATNRVDLLDPAILRPGRLDKSLYVG 368
Q + R+V+QLL MD + + V ++GATNR D LD A+ R GR D+ + +
Sbjct: 306 AQRE-MEKRIVAQLLTLMDELTLEKTGGKPVVVIGATNRPDSLDSALRRAGRFDREICLN 364
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLD--SLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+ + ++ +LKA+ + KL + + L P + GAD+ S+ + A AI+RI
Sbjct: 365 VPNEE-QRISILKAMTKNIKLENGEHFNYRELSKLTPGYV-GADLKSLVTAAGISAIKRI 422
Query: 427 ITSAPQVKSAPVIVTMDDFLGA 448
+ +++ V DD + A
Sbjct: 423 FETMSELQEESHSVK-DDSMDA 443
Score = 38 (18.4 bits), Expect = 2.4e-28, Sum P(2) = 2.4e-28
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 432 QVKSAPVIVTMDDFLGAC-SLATAPDKFSQSVAPD 465
Q + AP+ +T DF+ A S+ + + + PD
Sbjct: 484 QEQLAPLAITYQDFVNALPSVQPSAKREGFATIPD 518
>FB|FBgn0032450 [details] [associations]
symbol:CG5776 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005783
"endoplasmic reticulum" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014134 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 KO:K14575 GeneTree:ENSGT00700000104502 OMA:MLLRCVA
EMBL:AY051725 RefSeq:NP_609585.1 UniGene:Dm.8715 SMR:Q9VK63
EnsemblMetazoa:FBtr0080407 EnsemblMetazoa:FBtr0329925 GeneID:34680
KEGG:dme:Dmel_CG5776 UCSC:CG5776-RA FlyBase:FBgn0032450
InParanoid:Q9VK63 OrthoDB:EOG4547DV GenomeRNAi:34680 NextBio:789659
Uniprot:Q9VK63
Length = 799
Score = 504 (182.5 bits), Expect = 9.9e-48, P = 9.9e-48
Identities = 122/306 (39%), Positives = 183/306 (59%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDA 198
VE+++S+T G+ DL LV + ML+ N LQ Q ++ ++
Sbjct: 474 VEHVASITHGYVGADLANLVYAA----MLQAQPNP--LQMPHLQAALTRIKPSAMREV-L 526
Query: 199 PSVPNVSWEDIGGLSKLKAEILSTFRG----VNRTS--GLKRS-GLLLYGPPGTGKTLIA 251
PNV W DIGG S+L+ + ++ G+K G+L++GPPG KT+IA
Sbjct: 527 IECPNVQWSDIGGQSELRLAMQQAIEWPLLHADKFQRLGIKPPRGILMFGPPGCSKTMIA 586
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
KA+ATE ++NFL++KGPEL + ++G+SE +R VF KAR AP +VFFDE+D++ R +
Sbjct: 587 KALATESKLNFLSIKGPELFSMWVGESERAVREVFRKARQVAPAIVFFDEIDAIGGERSE 646
Query: 312 ED-QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
D SSG V +RV++QLL E+DGV Q+V I+ ATNR D++D A+LRPGR+D+ LYVG
Sbjct: 647 GDGSSSGSSVKERVLTQLLTELDGVEALQNVTIVAATNRPDMIDKALLRPGRIDRILYVG 706
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIIT 428
L + ++ +LK +R +S+DV ++ LV SGA+I ++C A RA+ +
Sbjct: 707 LPQCE-ARREILKIKLRAMPISNDVDMEKLVQ-LTEGYSGAEIQAVCHEAALRALEQSF- 763
Query: 429 SAPQVK 434
A VK
Sbjct: 764 EAEDVK 769
Score = 184 (69.8 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 81/305 (26%), Positives = 155/305 (50%)
Query: 144 SVTSGFERHDLT---CLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS 200
S+T ER T L LS+ +K L Q I ++ K I DD + +Q +
Sbjct: 212 SLTFRLERWQSTVEEALAGLSLDSKPL-QFIQVTNVTK--LHLITDDANQQEEEQKISHR 268
Query: 201 VPNVSWEDIGGLSK---LKAEILSTFRGVNRT--SGLKRS-GLLLYGPPGTGKTLIAKA- 253
+ IGGL + L E + G RT +GL+ S GLLLYG G GK+++ +A
Sbjct: 269 ITKCQ---IGGLDRQLQLVEESMEYALGF-RTLPAGLRVSRGLLLYGATGCGKSMVLEAM 324
Query: 254 --VATEC---RMNFLAVKGPELLNKYIGQSEENIRNVFLKARS--AAPCVVFFDELDSLA 306
VA E + + + E+ +K++G++E+ + +F +A + P ++ +++ +L
Sbjct: 325 CAVAEERSQGHVQLIRINSGEVYSKFLGETEQKLGAIFERAYNHYPHPTLLLIEDVHNLC 384
Query: 307 PRRGQEDQSSGVMDRVVSQLLAEMDGVHT-SQ----DVFILGATNRVDLLDPAILRPGRL 361
P++ ++S ++ RV L+ +D + + SQ F+L ++++D L P+I R GRL
Sbjct: 385 PKQ----ENSDLVKRVSLAFLSLLDQLSSPSQLKGSKTFVLATSSQIDTLHPSIRRAGRL 440
Query: 362 DKSLYVGLYEDRISQLGVLKAVVR--KFKLSDDV--SLDSLVHHFPSQMSGADIYSICSN 417
D + +G + ++L +++ +++ + +LSD+ + S+ H + GAD+ ++
Sbjct: 441 DNEVELGAPSSQ-ARLEIVRCLIKSVEHQLSDEEVEHVASITHGYV----GADLANLVYA 495
Query: 418 AWTRA 422
A +A
Sbjct: 496 AMLQA 500
Score = 53 (23.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 13/39 (33%), Positives = 21/39 (53%)
Query: 406 MSGADIYSICSNAWTRAIRRIITSAPQVKSAPVIVTMDD 444
+ G +++S+ RA+R + A QV AP IV D+
Sbjct: 600 IKGPELFSMWVGESERAVREVFRKARQV--APAIVFFDE 636
>GENEDB_PFALCIPARUM|PF14_0126 [details] [associations]
symbol:PF14_0126 "hypothetical protein,
conserved" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 433 (157.5 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 90/203 (44%), Positives = 134/203 (66%)
Query: 201 VPNVSWEDIGGLSKLKA---EIL---STFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
+P ++DIGG +K E L ++ + ++ G+LLYGPPG KTL AKA
Sbjct: 829 IPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKA 888
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A+E MNF++VKGPE+ +KY+G+SE++IRN+F KAR PCV+FFDE+DS+A R +
Sbjct: 889 IASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRN--N 946
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ V +RV+ QLL E+DG+ +V IL ATNR DL+DPA++RPGR D+ +YV L +
Sbjct: 947 NQNFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPL-PNY 1005
Query: 374 ISQLGVLKAVVRKFKLSDDVSLD 396
S+ +LK ++ FK+ + + D
Sbjct: 1006 SSRFAILKKNLKFFKIHNLIEYD 1028
Score = 126 (49.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 296 VVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAI 355
++F DE++ L +R +E+ + M+ S LL MDG+ ++GATN ++ +D A+
Sbjct: 558 IIFIDEIEILCKKR-EENNN---MNIYTSVLLNNMDGIKKHTHTILIGATNYINKIDLAL 613
Query: 356 LRPGRLDKSLYVGL--YEDRIS----QLGVLKAVVRKFKL 389
R GR DK + V L +DRIS +L ++K + K K+
Sbjct: 614 RRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKI 653
Score = 72 (30.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 168 KQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILS------ 221
K INK D +K + D ++ ++ +GG +K+K +I
Sbjct: 387 KHIINKYDKEKTNINS--DHMKKLNLKKMVVNKKEKKGLNKLGGYNKIKEDIYYYILIPL 444
Query: 222 TFRGVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVATE 257
++ + + G+LL+GPPG GKT IA + E
Sbjct: 445 IYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 58 (25.5 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 38/172 (22%), Positives = 68/172 (39%)
Query: 28 RYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVKYVYFKLCSFDSVNVKSNETXXXXXXXX 87
RY N I + + + K +E N + N+ Y L + D + K T
Sbjct: 549 RYQEENKCTIIFIDEIEILCKKREENNNM-NI-YTSVLLNNMDGIK-KHTHTILIGATNY 605
Query: 88 XXXXLVLIRKQIQKLFLKTINV-LPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVT 146
+ +R+ + F K I V LP + +R + Q +L+ + + G + L+ +
Sbjct: 606 INKIDLALRRSGR--FDKEIEVNLPNLK-DRISIFQKKLNLIKHNIG--KKKIHKLADLC 660
Query: 147 SGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDA 198
F D+ L+ +S+ + + I RD+ K DD +DQ A
Sbjct: 661 QSFTCSDINSLINISMFLNLKENKIISRDIFKTANVHTIDDTNDIKNDQTSA 712
Score = 45 (20.9 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 382 AVVRKFKLSDDVSLDSLVHHFPSQM---SGADIYSICSNAWTRAIRRIITSAPQVKSAPV 438
++ + +K +D + L H + SGA+I +IC A A+R+ + +K P
Sbjct: 1094 SLYKHYKYTD-IKFIKLCHVLAKKTKKYSGAEIVNICREASICALRQTLKKR-NIKINPK 1151
Query: 439 I 439
I
Sbjct: 1152 I 1152
Score = 43 (20.2 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 8 HNRINEDILSHLLTNYFATPRYHHLNDIVKINLKK 42
+N+I EDI ++L Y H+ D I++ K
Sbjct: 429 YNKIKEDIYYYILIPLI----YKHIYDAYHIDIHK 459
Score = 41 (19.5 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 17 SHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVKYV 62
+HL N + + ++ +N K NL + +Y + L +KYV
Sbjct: 774 NHLYNNSLINTQSNSCHEKKMMNYNKNNLYLLRYKHL--LKALKYV 817
Score = 38 (18.4 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 35 IVKINLKKYNLDIFKYDEVN 54
I K LK NLDI + +E N
Sbjct: 150 INKYILKSLNLDIKEIEEKN 169
>UNIPROTKB|Q8ILW7 [details] [associations]
symbol:PF14_0126 "AAA family ATPase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014187 HSSP:Q01853 GO:GO:0017111
RefSeq:XP_001348299.1 ProteinModelPortal:Q8ILW7 IntAct:Q8ILW7
MINT:MINT-1576109 EnsemblProtists:PF14_0126:mRNA GeneID:811707
KEGG:pfa:PF14_0126 EuPathDB:PlasmoDB:PF3D7_1412700 Uniprot:Q8ILW7
Length = 1219
Score = 433 (157.5 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 90/203 (44%), Positives = 134/203 (66%)
Query: 201 VPNVSWEDIGGLSKLKA---EIL---STFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
+P ++DIGG +K E L ++ + ++ G+LLYGPPG KTL AKA
Sbjct: 829 IPKTRFKDIGGYKFVKRCINECLIYPKKYKNIYDKYNIESPKGILLYGPPGCSKTLFAKA 888
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
+A+E MNF++VKGPE+ +KY+G+SE++IRN+F KAR PCV+FFDE+DS+A R +
Sbjct: 889 IASEIHMNFISVKGPEIFSKYVGESEKSIRNIFKKARENHPCVIFFDEIDSIAVNRN--N 946
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ V +RV+ QLL E+DG+ +V IL ATNR DL+DPA++RPGR D+ +YV L +
Sbjct: 947 NQNFVSNRVLCQLLNEIDGIKNRLNVIILAATNRPDLIDPALMRPGRFDRIIYVPL-PNY 1005
Query: 374 ISQLGVLKAVVRKFKLSDDVSLD 396
S+ +LK ++ FK+ + + D
Sbjct: 1006 SSRFAILKKNLKFFKIHNLIEYD 1028
Score = 126 (49.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 34/100 (34%), Positives = 57/100 (57%)
Query: 296 VVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAI 355
++F DE++ L +R +E+ + M+ S LL MDG+ ++GATN ++ +D A+
Sbjct: 558 IIFIDEIEILCKKR-EENNN---MNIYTSVLLNNMDGIKKHTHTILIGATNYINKIDLAL 613
Query: 356 LRPGRLDKSLYVGL--YEDRIS----QLGVLKAVVRKFKL 389
R GR DK + V L +DRIS +L ++K + K K+
Sbjct: 614 RRSGRFDKEIEVNLPNLKDRISIFQKKLNLIKHNIGKKKI 653
Score = 72 (30.4 bits), Expect = 9.2e-07, Sum P(4) = 9.2e-07
Identities = 25/97 (25%), Positives = 42/97 (43%)
Query: 168 KQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILS------ 221
K INK D +K + D ++ ++ +GG +K+K +I
Sbjct: 387 KHIINKYDKEKTNINS--DHMKKLNLKKMVVNKKEKKGLNKLGGYNKIKEDIYYYILIPL 444
Query: 222 TFRGVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVATE 257
++ + + G+LL+GPPG GKT IA + E
Sbjct: 445 IYKHIYDAYHIDIHKGILLHGPPGCGKTYIALLIKEE 481
Score = 58 (25.5 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 38/172 (22%), Positives = 68/172 (39%)
Query: 28 RYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVKYVYFKLCSFDSVNVKSNETXXXXXXXX 87
RY N I + + + K +E N + N+ Y L + D + K T
Sbjct: 549 RYQEENKCTIIFIDEIEILCKKREENNNM-NI-YTSVLLNNMDGIK-KHTHTILIGATNY 605
Query: 88 XXXXLVLIRKQIQKLFLKTINV-LPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVT 146
+ +R+ + F K I V LP + +R + Q +L+ + + G + L+ +
Sbjct: 606 INKIDLALRRSGR--FDKEIEVNLPNLK-DRISIFQKKLNLIKHNIG--KKKIHKLADLC 660
Query: 147 SGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDA 198
F D+ L+ +S+ + + I RD+ K DD +DQ A
Sbjct: 661 QSFTCSDINSLINISMFLNLKENKIISRDIFKTANVHTIDDTNDIKNDQTSA 712
Score = 45 (20.9 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 16/61 (26%), Positives = 29/61 (47%)
Query: 382 AVVRKFKLSDDVSLDSLVHHFPSQM---SGADIYSICSNAWTRAIRRIITSAPQVKSAPV 438
++ + +K +D + L H + SGA+I +IC A A+R+ + +K P
Sbjct: 1094 SLYKHYKYTD-IKFIKLCHVLAKKTKKYSGAEIVNICREASICALRQTLKKR-NIKINPK 1151
Query: 439 I 439
I
Sbjct: 1152 I 1152
Score = 43 (20.2 bits), Expect = 2.3e-47, Sum P(4) = 2.3e-47
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 8 HNRINEDILSHLLTNYFATPRYHHLNDIVKINLKK 42
+N+I EDI ++L Y H+ D I++ K
Sbjct: 429 YNKIKEDIYYYILIPLI----YKHIYDAYHIDIHK 459
Score = 41 (19.5 bits), Expect = 4.0e-43, Sum P(3) = 4.0e-43
Identities = 12/46 (26%), Positives = 22/46 (47%)
Query: 17 SHLLTNYFATPRYHHLNDIVKINLKKYNLDIFKYDEVNYLCNVKYV 62
+HL N + + ++ +N K NL + +Y + L +KYV
Sbjct: 774 NHLYNNSLINTQSNSCHEKKMMNYNKNNLYLLRYKHL--LKALKYV 817
Score = 38 (18.4 bits), Expect = 8.3e-43, Sum P(3) = 8.3e-43
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 35 IVKINLKKYNLDIFKYDEVN 54
I K LK NLDI + +E N
Sbjct: 150 INKYILKSLNLDIKEIEEKN 169
>POMBASE|SPBC56F2.07c [details] [associations]
symbol:SPBC56F2.07c "ribosome biogenesis factor
recycling AAA family ATPase (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPBC56F2.07c GO:GO:0005829 GO:GO:0005524 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0016887 PIR:T40537
RefSeq:NP_596710.1 HSSP:Q01853 ProteinModelPortal:O60058
PRIDE:O60058 EnsemblFungi:SPBC56F2.07c.1 GeneID:2540537
KEGG:spo:SPBC56F2.07c eggNOG:COG0464 HOGENOM:HOG000223225 KO:K14575
OMA:SSENMAT OrthoDB:EOG49CTH0 NextBio:20801663 GO:GO:0042273
Uniprot:O60058
Length = 809
Score = 501 (181.4 bits), Expect = 2.3e-47, P = 2.3e-47
Identities = 126/302 (41%), Positives = 180/302 (59%)
Query: 135 DASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN-KRDLQKED-FQQIY-DDLQSR 191
DA L E L+S T + DL +VR + + +K+ I+ ++D D F + DDL+
Sbjct: 469 DAQL-EDLASRTHAYVGADLAAVVREAAL-RAIKRTISLQKDTSGLDIFGAVQMDDLEFA 526
Query: 192 YSDQLDAP------SVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLL 238
S + PNV W DIGG ++K ++ L+ +R G+L
Sbjct: 527 LSSVRQSAMREFMMESPNVHWSDIGGQEEVKQKLKESVEWPLTHGETFSRLGVRPPKGVL 586
Query: 239 LYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVF 298
LYGPPG KT+ AKA+ATE +NF+AVKGPEL +K++G+SE +R VF KAR A+P V+F
Sbjct: 587 LYGPPGCSKTITAKAIATETGLNFIAVKGPELFDKFVGESERAVRQVFQKARQASPSVIF 646
Query: 299 FDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRP 358
FDE+D+L RG ED SS DRVV+ LL E+DG+ ++V +L ATNR D++DPA++RP
Sbjct: 647 FDEIDALTANRG-EDNSS---DRVVAALLNELDGIEALRNVLVLAATNRPDMIDPALMRP 702
Query: 359 GRLDKSLYVGL--YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICS 416
GRLD+ LYVG +E R Q ++K K K ++DV LD L+ SGA++ ++C
Sbjct: 703 GRLDRLLYVGPPNFEAR-KQ--IVKIQAEKMKFAEDVDLD-LIAEKTEGCSGAEVVALCQ 758
Query: 417 NA 418
A
Sbjct: 759 EA 760
Score = 364 (133.2 bits), Expect = 1.9e-32, P = 1.9e-32
Identities = 95/286 (33%), Positives = 151/286 (52%)
Query: 176 LQKEDFQQIYDDLQSRYSDQLDAPSVPN-VSWEDIGGLSKLKAEILSTFRGVNRTSGLKR 234
L ED Q + S + D P P+ V++ IGGL A+I + L +
Sbjct: 249 LPHEDRTQSAYNQGSEETQNFDGP--PSAVTFSSIGGLQAQIAQIRDIVELPFQNPELFK 306
Query: 235 -------SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFL 287
G+LLYGPPGTGKT++ +AVA E + GP ++ KY+G++E +R +F
Sbjct: 307 FFNIMPPRGVLLYGPPGTGKTMVMRAVAAEANAQVFTIDGPSVVGKYLGETESRLRKIFE 366
Query: 288 KARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
AR+ P ++F DE+D+LAP+R ED S R V+ LL +DG+ + V ++ ATNR
Sbjct: 367 DARAHQPSIIFIDEIDALAPKR-TEDVSEAE-SRAVATLLTLLDGMANAGKVVVIAATNR 424
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLS-DDVSLDSLVHHFPSQM 406
+ +D A+ RPGRL+K + +G+ D+ ++L ++K ++ +D L+ L + +
Sbjct: 425 PNSIDEALRRPGRLEKEIEIGI-PDKSARLDIIKLLLSGVPNEINDAQLEDLASRTHAYV 483
Query: 407 SGADIYSICSNAWTRAIRRIITSAPQVKSAPVI--VTMDDFLGACS 450
GAD+ ++ A RAI+R I+ + V MDD A S
Sbjct: 484 -GADLAAVVREAALRAIKRTISLQKDTSGLDIFGAVQMDDLEFALS 528
>TAIR|locus:2084163 [details] [associations]
symbol:CDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006396 "RNA processing"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0030422 "production of siRNA involved in RNA
interference" evidence=RCA] [GO:0035196 "production of miRNAs
involved in gene silencing by miRNA" evidence=RCA] [GO:0043687
"post-translational protein modification" evidence=RCA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC009325 GO:GO:0009524
EMBL:AY136443 EMBL:BT002135 IPI:IPI00547846 RefSeq:NP_186810.2
UniGene:At.27731 UniGene:At.63552 ProteinModelPortal:Q9SS94
SMR:Q9SS94 IntAct:Q9SS94 PaxDb:Q9SS94 PRIDE:Q9SS94
EnsemblPlants:AT3G01610.1 GeneID:821105 KEGG:ath:AT3G01610
GeneFarm:1903 TAIR:At3g01610 InParanoid:Q9SS94 KO:K14571
OMA:REGFTTI PhylomeDB:Q9SS94 ProtClustDB:CLSN2720022
Genevestigator:Q9SS94 GermOnline:AT3G01610 Uniprot:Q9SS94
Length = 820
Score = 485 (175.8 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 106/270 (39%), Positives = 167/270 (61%)
Query: 168 KQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAE----ILSTF 223
++ + K ++ DF++ + +Q+ + + VP+V W+D+GGL L+ + I+
Sbjct: 490 EEELEKLFVKMSDFEEAVNLVQASLTRE-GFSIVPDVKWDDVGGLDHLRLQFNRYIVRPI 548
Query: 224 R--GVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEE 280
+ + + G+ +G LLYGPPG GKTLIAKA A E NF+ +KG ELLNKY+G+SE
Sbjct: 549 KKPDIYKAFGVDLETGFLLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESEL 608
Query: 281 NIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVF 340
IR +F +AR+ APCV+FFDE+D+L RG+E + V++R+++Q L E+DG ++V+
Sbjct: 609 AIRTLFQRARTCAPCVIFFDEVDALTTSRGKE--GAWVVERLLNQFLVELDGGER-RNVY 665
Query: 341 ILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVH 400
++GATNR D++DPA LRPGR LYV L + + +LKA+ RK + V LD +
Sbjct: 666 VIGATNRPDVVDPAFLRPGRFGNLLYVPL-PNADERASILKAIARKKPIDPSVDLDGIAK 724
Query: 401 HFPSQMSGADIYSICSNAWTRAIRRIITSA 430
+ SGAD+ + A +A+ +I S+
Sbjct: 725 NNCEGFSGADLAHLVQKATFQAVEEMIGSS 754
Score = 322 (118.4 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 86/257 (33%), Positives = 135/257 (52%)
Query: 196 LDAPSVPNVSWEDIGGLSKL--KAEILSTFRGVN----RTSGLKR-SGLLLYGPPGTGKT 248
L+ +++D GG+ K+ + E+ F +N + G+K SG+L +GPPG GKT
Sbjct: 222 LEVEGTKGPTFKDFGGIKKILDELEMNVLFPILNPEPFKKIGVKPPSGILFHGPPGCGKT 281
Query: 249 LIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
+A A+A E + F + E+++ G SEENIR +F KA AP +VF DE+D++ +
Sbjct: 282 KLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSIVFIDEIDAIGSK 341
Query: 309 RGQEDQSSGVMDRVVSQLLAEMDGVHTSQD----------VFILGATNRVDLLDPAILRP 358
R E+Q + R+V+QLL MDG D V ++GATNR D LDPA+ R
Sbjct: 342 R--ENQQREMEKRIVTQLLTCMDGPGNKGDKNAPDSSAGFVLVIGATNRPDALDPALRRS 399
Query: 359 GRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNA 418
GR + + + D ++ +L V +K +L + P + GAD+ S+ A
Sbjct: 400 GRFETEIALTA-PDEDARAEILSVVAQKLRLEGPFDKKRIARLTPGFV-GADLESVAYLA 457
Query: 419 WTRAIRRIITSAPQVKS 435
+AI+RI+ S +S
Sbjct: 458 GRKAIKRILDSRKSEQS 474
Score = 39 (18.8 bits), Expect = 1.8e-26, Sum P(2) = 1.8e-26
Identities = 7/13 (53%), Positives = 10/13 (76%)
Query: 182 QQIYDDLQSRYSD 194
+ I DDL+SRY +
Sbjct: 36 EDIVDDLRSRYGN 48
Score = 37 (18.1 bits), Expect = 5.3e-47, Sum P(2) = 5.3e-47
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 27 PRYHHLNDIVKINLKKYN 44
PR+ +ND ++ N K N
Sbjct: 153 PRFDLINDSLRDNYAKLN 170
>ASPGD|ASPL0000002697 [details] [associations]
symbol:pexA species:162425 "Emericella nidulans"
[GO:0006631 "fatty acid metabolic process" evidence=IMP]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0006625 "protein targeting to peroxisome" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0005778
EMBL:BN001301 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 HOGENOM:HOG000163138
EnsemblFungi:CADANIAT00007027 OMA:APIFAQC Uniprot:C8V3A3
Length = 1225
Score = 501 (181.4 bits), Expect = 9.8e-47, P = 9.8e-47
Identities = 122/314 (38%), Positives = 185/314 (58%)
Query: 129 GGD---YGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD-------LQK 178
GGD G D ++ L+ T GF DL LV + +N+ L + I++ L
Sbjct: 765 GGDGFILGRDVDFLD-LAGKTDGFMPGDLVLLVARA-RNEALIRSISEASDESRAIILGA 822
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGL------ 232
DF + S ++ IGGL + + +L T + + + +
Sbjct: 823 ADFDNAIKGFTPASLRNVTLTS-STTTFSAIGGLHETRKMLLETLQYPTKYAPIFAQCPL 881
Query: 233 -KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
RSGLLLYG PG GKT++A AVA EC +NF++VKGPE+LNKYIG SE+++R++F +A++
Sbjct: 882 RLRSGLLLYGYPGCGKTMLASAVAGECGLNFISVKGPEILNKYIGASEKSVRDLFERAQA 941
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLL 351
A PC++FFDE DS+AP+RG + S+GV DRVV+QLL +MDG V++L AT+R DL+
Sbjct: 942 ARPCILFFDEFDSIAPKRGHD--STGVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLI 999
Query: 352 DPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDV--SLDSLVHHFPSQMSGA 409
DPA+LRPGRLDKSL + + + +++AV +K +S++V +D + + SGA
Sbjct: 1000 DPALLRPGRLDKSLLCDM-PNHADRADIIRAVSKKLAMSNEVVARIDEVAAR-TAGFSGA 1057
Query: 410 DIYSICSNAWTRAI 423
D+ ++ NA A+
Sbjct: 1058 DLQAVVYNAHLEAV 1071
>ASPGD|ASPL0000062283 [details] [associations]
symbol:AN1366 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001308 HOGENOM:HOG000223225 GO:GO:0017111 OMA:REGFTTI
EnsemblFungi:CADANIAT00001245 Uniprot:C8VRW3
Length = 729
Score = 490 (177.5 bits), Expect = 1.7e-46, P = 1.7e-46
Identities = 105/234 (44%), Positives = 153/234 (65%)
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAK 252
++P+ +W DIG LS ++ E+ + + L S G+LL+GPPG GKTL+AK
Sbjct: 462 TIPDTTWADIGALSGIRDELATAIVDPIKHPELYASVGITAPTGVLLWGPPGCGKTLLAK 521
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E R NF++VKGPELLNKY+G+SE +R VF++ARS+ PCV+FFDELD+L PRR +
Sbjct: 522 AVANESRANFISVKGPELLNKYVGESERAVRQVFVRARSSIPCVIFFDELDALVPRR--D 579
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTS-QDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
D S RVV+ LL E+DG+ +S Q ++++ ATNR D++DPA+LRPGRL+ L+V L
Sbjct: 580 DTLSEASARVVNTLLTELDGLGSSRQGIYVIAATNRPDIIDPAMLRPGRLETLLFVNL-P 638
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+ ++ +L+ +VR+ + + L L SGAD+ S+ A AI+R
Sbjct: 639 SPLERVEILQTLVRRLPIEFNEDLRRLAEECEG-FSGADLTSLLRRAGYNAIKR 691
Score = 336 (123.3 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 84/243 (34%), Positives = 138/243 (56%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAE-----ILSTFRG-VNRTSGLKRS-GLLLYGPPGTGKT 248
+D +VS D+GGL + + IL R V S ++ G+LL+GPPG GKT
Sbjct: 154 VDRSPPTHVSLADLGGLDDVVQQLGDLVILPMTRPQVYLASNVQPPRGVLLHGPPGCGKT 213
Query: 249 LIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
+IA A A E + F+++ P +++ G+SE+ +R F +A+ APC++F DE+D++ P+
Sbjct: 214 MIANAFAAELGVPFISISAPSIVSGMSGESEKALREHFEEAKRLAPCLIFIDEIDAITPK 273
Query: 309 RGQEDQSSGVMDRVVSQLLAEMDGVHTSQD----VFILGATNRVDLLDPAILRPGRLDKS 364
R E+ + R+V+QLL MD + + V +L ATNR D LD A+ R GR DK
Sbjct: 274 R--ENSQREMEKRIVAQLLTCMDDLALEKTDGKPVIVLAATNRPDSLDAALRRGGRFDKE 331
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + + +L+A+ RK +L DD+ +L P + GAD+ + S A + AI+
Sbjct: 332 INMTVPSEPVREQ-ILRALTRKMRLVDDLDFKTLAKRTPGFV-GADLNDLVSTAGSTAIK 389
Query: 425 RII 427
R +
Sbjct: 390 RYL 392
>WB|WBGene00003119 [details] [associations]
symbol:mac-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0019915 "lipid
storage" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040007 GO:GO:0002119 GO:GO:0006629
GO:GO:0000003 GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0017111 KO:K14571 OMA:NDMTLKE
GeneTree:ENSGT00570000079239 EMBL:AL117203 PIR:T31591
RefSeq:NP_496814.1 ProteinModelPortal:Q9NAG4 SMR:Q9NAG4
IntAct:Q9NAG4 STRING:Q9NAG4 PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7
GeneID:174974 KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974
WormBase:Y48C3A.7 InParanoid:Q9NAG4 NextBio:886252
ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 491 (177.9 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 113/269 (42%), Positives = 165/269 (61%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GL 232
EDF++ +Q + A +VP+VSW+DIG L +++ ++ S + R G+
Sbjct: 506 EDFERALSTIQPAAKREGFA-TVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGI 564
Query: 233 --KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
+ G+LL GPPG GKTL+AKAVA E MNF++VKGPELLN Y+G+SE +R VF +AR
Sbjct: 565 DCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRAR 624
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+ PCV+FFDE+D+L P+R + S G R+V+QLL EMDGV Q VF++GATNR D+
Sbjct: 625 DSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGVEGRQKVFLIGATNRPDI 682
Query: 351 LDPAILRPGRLDKSLYVGL--YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFP--SQM 406
+D AILRPGRLDK L+V EDR+ L + L +D+ + P +
Sbjct: 683 VDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQ-LPELAGF 741
Query: 407 SGADIYSICSNAWTRAIR-RIITSAPQVK 434
+GAD+ ++ + A++ R++ + VK
Sbjct: 742 TGADLAALIHESSLLALQARVLENDESVK 770
Score = 207 (77.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 51/145 (35%), Positives = 82/145 (56%)
Query: 193 SDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLKRS-GLLLYGPPGTG 246
SD + +P +V +E IGG + E+ + R T G+ G +++GPPG G
Sbjct: 193 SDTI-SPRESHVKFEHIGGADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCG 251
Query: 247 KTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA 306
KT+ A+AVA E + L + EL++ G++EE IR +F A+ +PC++ D++D++A
Sbjct: 252 KTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311
Query: 307 PRRGQEDQSSGVMDRVVSQLLAEMD 331
PRR E + RVVSQL + +D
Sbjct: 312 PRR--ETAQREMERRVVSQLCSSLD 334
Score = 97 (39.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++G T+R D +D + R GR + + +G+ D ++ +L+ + K L+ DV+L +
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGI-PDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRI 426
P + GAD+ ++ A AI R+
Sbjct: 429 AKLTPGYV-GADLQALIREAAKVAIDRV 455
>UNIPROTKB|Q9NAG4 [details] [associations]
symbol:mac-1 "Protein MAC-1" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0040007 GO:GO:0002119 GO:GO:0006629 GO:GO:0000003
GO:GO:0019915 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 KO:K14571 OMA:NDMTLKE GeneTree:ENSGT00570000079239
EMBL:AL117203 PIR:T31591 RefSeq:NP_496814.1
ProteinModelPortal:Q9NAG4 SMR:Q9NAG4 IntAct:Q9NAG4 STRING:Q9NAG4
PaxDb:Q9NAG4 EnsemblMetazoa:Y48C3A.7 GeneID:174974
KEGG:cel:CELE_Y48C3A.7 UCSC:Y48C3A.7 CTD:174974 WormBase:Y48C3A.7
InParanoid:Q9NAG4 NextBio:886252 ArrayExpress:Q9NAG4 Uniprot:Q9NAG4
Length = 813
Score = 491 (177.9 bits), Expect = 3.0e-46, P = 3.0e-46
Identities = 113/269 (42%), Positives = 165/269 (61%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GL 232
EDF++ +Q + A +VP+VSW+DIG L +++ ++ S + R G+
Sbjct: 506 EDFERALSTIQPAAKREGFA-TVPDVSWDDIGALVEVRKQLEWSILYPIKRADDFAALGI 564
Query: 233 --KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKAR 290
+ G+LL GPPG GKTL+AKAVA E MNF++VKGPELLN Y+G+SE +R VF +AR
Sbjct: 565 DCRPQGILLCGPPGCGKTLLAKAVANETGMNFISVKGPELLNMYVGESERAVRTVFQRAR 624
Query: 291 SAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDL 350
+ PCV+FFDE+D+L P+R + S G R+V+QLL EMDGV Q VF++GATNR D+
Sbjct: 625 DSQPCVIFFDEIDALVPKRSHGESSGGA--RLVNQLLTEMDGVEGRQKVFLIGATNRPDI 682
Query: 351 LDPAILRPGRLDKSLYVGL--YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFP--SQM 406
+D AILRPGRLDK L+V EDR+ L + L +D+ + P +
Sbjct: 683 VDAAILRPGRLDKILFVDFPSVEDRVDILRKSTKNGTRPMLGEDIDFHEIAQ-LPELAGF 741
Query: 407 SGADIYSICSNAWTRAIR-RIITSAPQVK 434
+GAD+ ++ + A++ R++ + VK
Sbjct: 742 TGADLAALIHESSLLALQARVLENDESVK 770
Score = 207 (77.9 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 51/145 (35%), Positives = 82/145 (56%)
Query: 193 SDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TSGLKRS-GLLLYGPPGTG 246
SD + +P +V +E IGG + E+ + R T G+ G +++GPPG G
Sbjct: 193 SDTI-SPRESHVKFEHIGGADRQFLEVCRLAMHLKRPKTFATLGVDPPRGFIVHGPPGCG 251
Query: 247 KTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA 306
KT+ A+AVA E + L + EL++ G++EE IR +F A+ +PC++ D++D++A
Sbjct: 252 KTMFAQAVAGELAIPMLQLAATELVSGVSGETEEKIRRLFDTAKQNSPCILILDDIDAIA 311
Query: 307 PRRGQEDQSSGVMDRVVSQLLAEMD 331
PRR E + RVVSQL + +D
Sbjct: 312 PRR--ETAQREMERRVVSQLCSSLD 334
Score = 97 (39.2 bits), Expect = 1.2e-18, Sum P(2) = 1.2e-18
Identities = 25/88 (28%), Positives = 47/88 (53%)
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V ++G T+R D +D + R GR + + +G+ D ++ +L+ + K L+ DV+L +
Sbjct: 371 VLVIGTTSRPDAVDGGLRRAGRFENEISLGI-PDETAREKILEKIC-KVNLAGDVTLKQI 428
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRI 426
P + GAD+ ++ A AI R+
Sbjct: 429 AKLTPGYV-GADLQALIREAAKVAIDRV 455
>UNIPROTKB|G4MQP9 [details] [associations]
symbol:MGG_09299 "Peroxisome biosynthesis protein"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005778 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 GO:GO:0043581 GO:GO:0042623 GO:GO:0006625 KO:K13338
PANTHER:PTHR23077:SF12 RefSeq:XP_003709948.1
ProteinModelPortal:G4MQP9 EnsemblFungi:MGG_09299T0 GeneID:2680162
KEGG:mgr:MGG_09299 Uniprot:G4MQP9
Length = 1250
Score = 495 (179.3 bits), Expect = 4.5e-46, P = 4.5e-46
Identities = 104/235 (44%), Positives = 157/235 (66%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGL-------KRSGLLLYGPPGTGKTLIAKAVAT 256
+ ++ IGGLS+ + +L T + + + + RSGLLLYG PG GKTL+A AVA
Sbjct: 851 IKFDSIGGLSETRRVLLETLQYPTKYAPIFAQCPLRLRSGLLLYGYPGCGKTLLASAVAG 910
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
EC +NF++VKGPE+LNKYIG SE+++R++F +A +A PCV+FFDE DS+AP+RG + S+
Sbjct: 911 ECGLNFISVKGPEILNKYIGASEKSVRDLFERASAAKPCVLFFDEFDSIAPKRGHD--ST 968
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
GV DRVV+QLL +MDG V++L AT+R DL+DPA+LRPGRLDKSL + + +
Sbjct: 969 GVTDRVVNQLLTQMDGAEGLSGVYVLAATSRPDLIDPALLRPGRLDKSLICD-FPNAEDR 1027
Query: 377 LGVLKAVVRKFKLSDDVSLDSL----VHHFPSQMSGADIYSICSNAWTRAIRRII 427
L +++A+ K K+ ++V + + +GAD+ ++ SN+ AI ++
Sbjct: 1028 LDIIRALASKVKVGEEVLANEAELLELARRTEGFTGADLQALMSNSQLEAIHDVL 1082
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 484 (175.4 bits), Expect = 1.2e-45, P = 1.2e-45
Identities = 121/296 (40%), Positives = 172/296 (58%)
Query: 142 LSSVTSGFERHDLTCLVRLSVK---NKMLKQGINKRDLQKEDFQQIYDDL-QSRYSDQLD 197
++S T G+ DLT L R SV N+ L GI + + K +Y L + R S +
Sbjct: 430 IASKTHGYVGADLTALCRESVMKAINRGLTVGIPQTAI-KVTVDDVYHALPEIRPSAMRE 488
Query: 198 A-PSVPNVSWEDIGGLSKLKAEILSTFR-GVNRTSGLKR------SGLLLYGPPGTGKTL 249
+P V W DIGG +LK +++ + + + K G+LLYGPPG KTL
Sbjct: 489 IFLEMPKVHWSDIGGQEELKRKLIEVVQLPLEASDSFKNLGVSSPKGVLLYGPPGCSKTL 548
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
AKA+ATE +NFLAVKGPE+ NKY+G+SE IR +F KAR+A+P ++FFDE+D++A R
Sbjct: 549 TAKALATESGLNFLAVKGPEIFNKYVGESERAIREIFRKARAASPSIIFFDEIDAIAGDR 608
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
D S+ V++ LL E+DGV + V I+GATN+ +DPA+LRPGRLD+ +YV
Sbjct: 609 -DGDSSTTAASNVLTSLLNEIDGVEELKGVVIVGATNKPTEIDPALLRPGRLDRHIYVAP 667
Query: 370 YEDRISQLGVLKAVVRKFKL-SDDVSLD-SLVHHFPSQMSGADIYSICSNAWTRAI 423
D ++L +L+ RKF L S D S+D + SGA++ +C A AI
Sbjct: 668 -PDYDARLQILQKCSRKFNLQSGDESVDLQKLAELTDGCSGAEVTLLCQEAGLAAI 722
Score = 357 (130.7 bits), Expect = 9.2e-32, P = 9.2e-32
Identities = 88/262 (33%), Positives = 152/262 (58%)
Query: 199 PSVPN-VSWEDIGGLSKLKAEIL-STFR-GVNRTS-----GLKRS-GLLLYGPPGTGKTL 249
P++P ++++ +GGLSK + E+L ST +N + G+ G+LL+GPPGTGKT+
Sbjct: 220 PNLPQQITYDQVGGLSK-QIELLKSTIELPLNNPTLFSDFGISPPRGILLHGPPGTGKTM 278
Query: 250 IAKAVATEC-RMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
+ + VA + L + GP +++KY+G++E IR++F +A+ P ++F DE+DS+AP
Sbjct: 279 LLRCVANSITEAHVLTINGPSIVSKYLGETENAIRDIFNEAKKFQPSIIFMDEIDSIAPS 338
Query: 309 RGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
R +D S RVV+QLL MDG+ + + ++GATNR + +D A+ RPGR D+ + +G
Sbjct: 339 RTSDD-SGETESRVVAQLLTVMDGMGDNGRIVVIGATNRPNSIDSALRRPGRFDQEVEIG 397
Query: 369 LYE----DRISQLGVLKAVVRKFKLSDD--VSLDSLVHHFPSQMSGADIYSICSNAWTRA 422
+ + + I K K +++ + S+ S H + GAD+ ++C + +A
Sbjct: 398 IPDVEAREEILTKQFAKMNSEKCQITKEEIASIASKTHGYV----GADLTALCRESVMKA 453
Query: 423 IRRIITSAPQVKSAPVIVTMDD 444
I R +T + + VT+DD
Sbjct: 454 INRGLTVG--IPQTAIKVTVDD 473
>FB|FBgn0013563 [details] [associations]
symbol:Pex1 "Peroxin 1" species:7227 "Drosophila
melanogaster" [GO:0007031 "peroxisome organization"
evidence=ISS;IMP] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006625 "protein targeting to
peroxisome" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0021782 "glial cell development" evidence=IMP] [GO:0007422
"peripheral nervous system development" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 EMBL:AE014296
GO:GO:0006200 GO:GO:0007422 GO:GO:0007417 GO:GO:0007031
GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 GO:GO:0048137 UniGene:Dm.10724
GO:GO:0021782 GO:GO:0006625 KO:K13338 PANTHER:PTHR23077:SF12
CTD:5189 GeneTree:ENSGT00550000075032 EMBL:AY075423
RefSeq:NP_652016.1 SMR:Q9VUC7 IntAct:Q9VUC7 MINT:MINT-335404
STRING:Q9VUC7 EnsemblMetazoa:FBtr0075777 GeneID:45460
KEGG:dme:Dmel_CG6760 UCSC:CG6760-RA FlyBase:FBgn0013563
InParanoid:Q9VUC7 OMA:VLMWPSR OrthoDB:EOG4BNZSX GenomeRNAi:45460
NextBio:838158 Uniprot:Q9VUC7
Length = 1006
Score = 482 (174.7 bits), Expect = 6.5e-45, P = 6.5e-45
Identities = 136/373 (36%), Positives = 203/373 (54%)
Query: 105 KTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSV-- 162
+T+ LP E R +I +L C + D LV++ S++T G+ + DL V ++
Sbjct: 614 QTVARLPNLERADREIILREL-CSHINVAKDLDLVKF-SNLTEGYRKCDLVQFVERAIFY 671
Query: 163 KNKMLK-QGINKRDLQKEDFQQI--Y--DDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKA 217
++ K Q + D E + Y +QS DA + + E++ GL +
Sbjct: 672 AYRISKTQPLLTNDQLIESLEHTNSYCLQGIQSNQRTGNDADA-NEMRVEELPGLESVVG 730
Query: 218 ---EIL---STFRGVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPEL 270
E+L S + + S L+ ++G+LLYGPPGTGKT + +AT + ++VKGPEL
Sbjct: 731 VLEEVLMWPSRYPTIFNASPLRNQAGVLLYGPPGTGKTYLVSQLATSWNLRIISVKGPEL 790
Query: 271 LNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEM 330
L KYIGQSEEN+RN+F +ARSA PCV+FFDE DSLAP+RG + S+GV DRVV+QLL E+
Sbjct: 791 LAKYIGQSEENVRNLFNRARSARPCVLFFDEFDSLAPKRGHD--STGVTDRVVNQLLTEL 848
Query: 331 DGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLS 390
DGV Q V ++ AT+R +LLDPA+LR GR+D+ + L D +++ + +A+ L
Sbjct: 849 DGVEGLQGVTVIAATSRPELLDPALLRSGRIDRLVECPL-PDAPARVRIFEALSSTLSLD 907
Query: 391 DDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVKSAPVIVTMDDFLGACS 450
+ V D + +GADI SI ++A A++ + K A I L
Sbjct: 908 ECVDFDWFAGK-TANYTGADIQSILTSANMAAVKEALAQFGHEKLAKKISLKQKHLIESF 966
Query: 451 LATAPDKFSQSVA 463
T P + VA
Sbjct: 967 QTTRPSLSASDVA 979
>DICTYBASE|DDB_G0282241 [details] [associations]
symbol:DDB_G0282241 species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0282241 GO:GO:0005524 eggNOG:COG0464
GO:GO:0017111 EMBL:AAFI02000046 RefSeq:XP_640304.1
ProteinModelPortal:Q54ST1 EnsemblProtists:DDB0205288 GeneID:8623480
KEGG:ddi:DDB_G0282241 InParanoid:Q54ST1 OMA:IEMISID Uniprot:Q54ST1
Length = 825
Score = 479 (173.7 bits), Expect = 6.8e-45, P = 6.8e-45
Identities = 119/344 (34%), Positives = 194/344 (56%)
Query: 96 RKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYL--SSVTSGFERHD 153
R I KL+ LP++ LL Q + +G + + +++L S F +++
Sbjct: 466 RLDILKLYCSK---LPISPTPSNLLDQIADETVG----YVGANIQFLCRDSAFIAFSKYN 518
Query: 154 LTCLVRLSVKNKMLKQGINKRD--LQKEDFQQ-IYDDLQSRYSDQLDAPSVPNVSWEDIG 210
L L +N + N++ ++ EDF++ I ++ S + ++ NVSW+DIG
Sbjct: 519 L-----LKYQNNEQNENENEKKYLIEIEDFRESIKNNPASILKGEHLVENISNVSWDDIG 573
Query: 211 GLSKLKAEILSTFRGVN--RTS----GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFL 263
GL +K E+ N + S GL G++LYGPPG KT + KAVA+ +++FL
Sbjct: 574 GLDDIKEELRQAIEWPNLYKESFEKFGLSPPKGIILYGPPGCSKTTLVKAVASSSKLSFL 633
Query: 264 AVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSG--VMDR 321
++ G + + Y+G SE+ IR++F KAR P ++FFDE+D++ +R D SSG R
Sbjct: 634 SLSGATIFSPYLGDSEQTIRDIFKKARQTTPSILFFDEIDAIVSKRNLSDNSSGDNAQSR 693
Query: 322 VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLK 381
V+S L EMDGV V ++GATNR+D++D A+LRPGR DK L + L D++S+L +LK
Sbjct: 694 VLSTFLNEMDGVEQLNGVIVIGATNRLDMIDNALLRPGRFDKILEIKL-PDQLSRLKILK 752
Query: 382 AVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+ LSD+V+L + + + SGAD+ ++C A +++RR
Sbjct: 753 IKTKSIPLSDNVNLIE-ISNLTNGFSGADLENLCREASFQSLRR 795
Score = 279 (103.3 bits), Expect = 2.3e-21, P = 2.3e-21
Identities = 75/226 (33%), Positives = 125/226 (55%)
Query: 209 IGGLS---KLKAEILS---TFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAVATECRMN 261
IGGL+ KL E++ F V +T + G+LL GPPGTGKT + + V +
Sbjct: 289 IGGLNEQIKLLEEMMIYPILFPQVFKTLNIDPPKGILLKGPPGTGKTHLVRTVCDAYDIE 348
Query: 262 FLAVKGPELLNKYIGQSEENIRNVFLKA------RSAAPCVVFFDELDSLAPRRGQEDQS 315
+++ ++ YIG++EEN+RN+F +A +S +P VVF DE+D++ P R + Q+
Sbjct: 349 MISIDCAKISGSYIGETEENLRNIFQEASDKSIAKSNSPIVVFIDEIDTICPPRSKSTQN 408
Query: 316 SGVMDRVVSQLLAEMDGVHTSQ-DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
RVV Q L +DG+ + ++ I+ ATNR + +D A+ RPGRLD+ + + + ++
Sbjct: 409 ES---RVVGQFLTLLDGIGARKGNLIIIAATNRPNQIDNALRRPGRLDREIEIPV-PNKQ 464
Query: 375 SQLGVLKAVVRKFKLSDDVS--LDSLVHHFPSQMSGADIYSICSNA 418
+L +LK K +S S LD + + GA+I +C ++
Sbjct: 465 QRLDILKLYCSKLPISPTPSNLLDQIADETVGYV-GANIQFLCRDS 509
>GENEDB_PFALCIPARUM|MAL8P1.92 [details] [associations]
symbol:MAL8P1.92 "ATPase, putative"
species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AL844507 RefSeq:XP_001349382.2
ProteinModelPortal:Q8IAX9 EnsemblProtists:MAL8P1.92:mRNA
GeneID:2655443 KEGG:pfa:MAL8P1.92 EuPathDB:PlasmoDB:PF3D7_0814300
Uniprot:Q8IAX9
Length = 1200
Score = 451 (163.8 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44
Identities = 90/223 (40%), Positives = 143/223 (64%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTF------RGVNRTSGLKRS-GLLLYGPPGTGKTLIAKA 253
VPN++ ++IG L K+K + S F + + G+ +S G+LLYGPPG GKT++AKA
Sbjct: 670 VPNINLDNIGSLKKIKKILESKFILPVKYSNIYKHLGINKSMGILLYGPPGCGKTMLAKA 729
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
++ E + NF+A+KGPE+LNKY+G+SE+ +R +F A PC++FFDE+DS+ R +
Sbjct: 730 ISNEMKANFIAIKGPEILNKYVGESEKKVREIFSYASVYKPCLIFFDEIDSICINRSN-N 788
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL--YE 371
+S DRVV+QLL+EMDG+ + V+I+ TNR D++D A+LR GR D+ +Y+ L Y+
Sbjct: 789 KSVSASDRVVNQLLSEMDGLSQREGVYIIATTNRPDIIDKALLRSGRFDQLIYISLPKYQ 848
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSI 414
R+ +LK + + + +V + + SGAD+Y +
Sbjct: 849 GRVD---ILKKLSKNMPIDKNVRFEE-ISKLTRGYSGADLYGV 887
Score = 51 (23.0 bits), Expect = 8.6e-44, Sum P(2) = 8.6e-44
Identities = 23/95 (24%), Positives = 47/95 (49%)
Query: 94 LIRKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHD 153
++ +IQK F+ TI P+ + R+ I Q C +Y F + + Y +S+T GF R
Sbjct: 396 ILYSKIQK-FI-TI---PIPTYDDRIEILEQASC---EY-FLSFDIPYTASITYGFNRGQ 446
Query: 154 LTCLVR----LSVKNKMLKQGINKRDLQKEDFQQI 184
+ ++ L + N++L++ + + K + +
Sbjct: 447 IFDIMNESLNLYIYNELLRKDLKINHMIKNEVDHV 481
>UNIPROTKB|P96281 [details] [associations]
symbol:Rv0435c "Transitional endoplasmic reticulum ATPase"
species:83332 "Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell
wall" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0051301 GenomeReviews:AE000516_GR GenomeReviews:AL123456_GR
EMBL:BX842573 HSSP:Q01853 HOGENOM:HOG000223225 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 KO:K13525
SMART:SM01073 EMBL:CP003248 PIR:A70632 RefSeq:NP_214949.1
RefSeq:NP_334860.1 RefSeq:YP_006513761.1 SMR:P96281
EnsemblBacteria:EBMYCT00000001241 EnsemblBacteria:EBMYCT00000071017
GeneID:13318302 GeneID:886352 GeneID:923768 KEGG:mtc:MT0451
KEGG:mtu:Rv0435c KEGG:mtv:RVBD_0435c PATRIC:18122702
TubercuList:Rv0435c OMA:KTHGFAG ProtClustDB:CLSK871802
Uniprot:P96281
Length = 728
Score = 452 (164.2 bits), Expect = 3.2e-42, P = 3.2e-42
Identities = 119/332 (35%), Positives = 184/332 (55%)
Query: 110 LPLTEPE-RRLLIQYQLDCLG-GDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKML 167
LPL + R+ L++ L+ + GD D ++S T GF DL LVR +
Sbjct: 368 LPLPDAATRKSLLEALLNPVPTGDLNLDE-----IASRTPGFVVADLAALVREAALRAAS 422
Query: 168 KQGINKRD--LQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEIL-STFR 224
+ + R L ++D ++ D +V +V+ +D+G ++ K + +
Sbjct: 423 RASADGRPPMLHQDDLLGALTVIRPLSRSASDEVTVGDVTLDDVGDMAAAKQALTEAVLW 482
Query: 225 GVNRTSGLKR------SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQS 278
+ R G+LLYGPPG GKT + +A+A+ +++ AVKG EL++K++G S
Sbjct: 483 PLQHPDTFARLGVEPPRGVLLYGPPGCGKTFVVRALASTGQLSVHAVKGSELMDKWVGSS 542
Query: 279 EENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQD 338
E+ +R +F +AR +AP +VF DELD+LAPRRGQ S GV DRVV+ LL E+DG+ +D
Sbjct: 543 EKAVRELFRRARDSAPSLVFLDELDALAPRRGQSFDS-GVSDRVVAALLTELDGIDPLRD 601
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
V +LGATNR DL+DPA+LRPGRL++ ++V D ++ +L+ + LS DV LD +
Sbjct: 602 VVMLGATNRPDLIDPALLRPGRLERLVFVEP-PDAAARREILRTAGKSIPLSSDVDLDEV 660
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRRIITSA 430
S AD ++ A A+RR I +A
Sbjct: 661 AAGLDGY-SAADCVALLREAALTAMRRSIDAA 691
>UNIPROTKB|G4ML45 [details] [associations]
symbol:MGG_06686 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:CM001231 KO:K14571
RefSeq:XP_003709393.1 ProteinModelPortal:G4ML45
EnsemblFungi:MGG_06686T0 GeneID:2684859 KEGG:mgr:MGG_06686
Uniprot:G4ML45
Length = 770
Score = 453 (164.5 bits), Expect = 3.4e-42, P = 3.4e-42
Identities = 103/248 (41%), Positives = 152/248 (61%)
Query: 200 SVPNVSWEDIGGLSKLKAEI-LSTFRGVNRTS-----GLKRS-GLLLYGPPGTGKTLIAK 252
+VPN +W ++G L ++ ++ + + + R G+K S G+LL+GPPG GKTL+AK
Sbjct: 498 TVPNTTWSEVGALQNVRKKLEYAIVQPIERPEKFAALGIKPSAGILLWGPPGCGKTLVAK 557
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA + NF+++KGPELLNKY+G+SE N+R +F +A+S+APC++FFDELD+L P R +
Sbjct: 558 AVANASKANFISIKGPELLNKYVGESEYNVRQLFSRAKSSAPCILFFDELDALVPTR--D 615
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY-- 370
SG RVV+ LL E+DGV Q ++++GATNR D +D AI RPGRL +YVGL
Sbjct: 616 FTMSGATSRVVNALLTELDGVGDRQGIYVIGATNRPDSIDEAIRRPGRLGTDIYVGLPTP 675
Query: 371 EDRISQLGVL-KAVVRKFKLSDDVSLD-SLVHHFP--SQMSGADIYSICSNAWTRAIRRI 426
EDR L + + V + D V V P + +GAD+ + + A + R+
Sbjct: 676 EDRFDILRTIYETTVPGGRAPDAVRKTIERVARDPRCGKFTGADLRQLLTAASEACMIRV 735
Query: 427 ITS-APQV 433
AP +
Sbjct: 736 QDDEAPMI 743
Score = 260 (96.6 bits), Expect = 2.9e-19, P = 2.9e-19
Identities = 84/292 (28%), Positives = 149/292 (51%)
Query: 197 DAPSVPNV----SWEDIGGLSKL-----KAEILSTFRGVN--RTSGLKRSGLLLYGPPGT 245
+A +VP V ED+GG+S++ K +L G R ++ +LL+GP GT
Sbjct: 183 EAAAVPEVFNGPKLEDMGGISQILEALEKPLVLPLRMGEEYARMGHKPQAAILLHGPSGT 242
Query: 246 GKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSL 305
GKT + +A+A + F+ V L++ G+SE+NIR F +A APC++F DE+D +
Sbjct: 243 GKTAVVRALADTLQCAFVPVSATSLVSGISGESEKNIREAFDEAIRLAPCLLFLDEVDVV 302
Query: 306 APRRGQEDQSSGVMD-RVVSQLLAEMDGVH--TS--QDVFILGATNRVDLLDPAILRPGR 360
A G+ D + M+ R+ S++ +D + TS ++V ++ ATNR D ++P + R R
Sbjct: 303 A---GKMDGAQKAMEVRMSSEISQGLDKIVRCTSPGRNVVVIAATNRPDSIEPTVRR--R 357
Query: 361 LDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWT 420
+ L + + D ++ +L+ + R +LSDDV +L P + GAD+ + A +
Sbjct: 358 FQE-LEMSM-PDEAARESILRTMTRNKRLSDDVDFTALARLTPGYV-GADLATAVDFAAS 414
Query: 421 RAIRRIITSAPQVKSAPVIVTMDDFLGACSLA-TAPDKFSQSVAPDNYSLSV 471
A+ + T+ +A V + L T P + +++ DN + +
Sbjct: 415 EAMMAVYTAKISRLTAAVATGSPSVVDRIRLPWTLPAESNEAPPIDNQEMQL 466
>WB|WBGene00004191 [details] [associations]
symbol:prx-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005777 "peroxisome" evidence=IEA]
[GO:0007031 "peroxisome organization" evidence=IEA] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0006625 "protein targeting
to peroxisome" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR015342 InterPro:IPR025653
Pfam:PF00004 Pfam:PF09262 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0040010 GO:GO:0005778 HSSP:Q01853 GO:GO:0042623
GO:GO:0006625 PANTHER:PTHR23077:SF12 GeneTree:ENSGT00550000075032
EMBL:Z70205 UniGene:Cel.18145 GeneID:181538 KEGG:cel:CELE_C11H1.4
CTD:181538 NextBio:914356 EMBL:AB054992 PIR:T19207 PIR:T19208
RefSeq:NP_510386.2 ProteinModelPortal:G5ED99 SMR:G5ED99
EnsemblMetazoa:C11H1.4a WormBase:C11H1.4a OMA:PYPEHGI
Uniprot:G5ED99
Length = 996
Score = 453 (164.5 bits), Expect = 8.4e-42, P = 8.4e-42
Identities = 105/238 (44%), Positives = 150/238 (63%)
Query: 197 DAPSVPNVSWEDIGGL---SKLKAEIL---STFRGVNRTSGLKRS-GLLLYGPPGTGKTL 249
D +P + ED+GG+ KL +++ + + + G+ S G+LL+GP G GKTL
Sbjct: 720 DGQVLPTM--EDVGGMFEQKKLLEQVIIWPRKYPQLFESVGVPVSKGILLHGPSGCGKTL 777
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+A A + + + VKGPELL+KYIG SEEN+R VF KARS APC++FFDELDSLAP+R
Sbjct: 778 LANATISNSNFSVVNVKGPELLSKYIGASEENVRLVFEKARSCAPCILFFDELDSLAPKR 837
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTS-QDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
G + S+GV DRVV+QLL E+DG + V ILG T+R+DL+D A+LRPGR D +Y G
Sbjct: 838 GHD--STGVTDRVVNQLLTELDGAEGGMKGVIILGCTSRIDLIDDALLRPGRFDHHVYCG 895
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
+ ++ +L ++K + K K +D V + L SGAD+ + +NA R+I
Sbjct: 896 -HPEKTERLDIMKVLTNKLKPTD-VDFECLAQKTDG-WSGADLQLLFTNAQFYNARQI 950
>POMBASE|SPCC553.03 [details] [associations]
symbol:pex1 "AAA family ATPase Pex1 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005777
"peroxisome" evidence=ISO] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006625
"protein targeting to peroxisome" evidence=IEA] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR015342 InterPro:IPR025653 Pfam:PF00004 Pfam:PF09262
SMART:SM00382 PomBase:SPCC553.03 GO:GO:0005829 GO:GO:0005524
GO:GO:0005777 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 HSSP:Q01853 eggNOG:COG0464
GO:GO:0042623 GO:GO:0006625 PANTHER:PTHR23077:SF12 PIR:T41400
RefSeq:NP_587770.1 ProteinModelPortal:O74941
EnsemblFungi:SPCC553.03.1 GeneID:2539405 KEGG:spo:SPCC553.03
OrthoDB:EOG4TQQJ3 NextBio:20800569 Uniprot:O74941
Length = 937
Score = 452 (164.2 bits), Expect = 9.1e-42, P = 9.1e-42
Identities = 119/356 (33%), Positives = 201/356 (56%)
Query: 139 VEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN--KRDLQKEDFQQIYDD---LQSRYS 193
+E++S T G+ DL V+ + +++ N K + K ++ D LQ R +
Sbjct: 537 IEFISVKTEGYLMTDLVLFVKRLLSEAFVEKIQNGPKHLMNKGLIEKTLKDFVPLQLRKA 596
Query: 194 DQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKR-------SGLLLYGPPGTG 246
+ + ++ W DI G+ + K + + S + + +G+LL+G PG G
Sbjct: 597 KFVKS----SIRWIDIAGMQEAKEAVRDIIESPVKYSLIYKQCRLRLPTGILLFGYPGCG 652
Query: 247 KTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA 306
KT +A A+++ + F+++KGPELL+KYIG+SE+ +R++F +A+ A PCV+FFDE DS+A
Sbjct: 653 KTYLASAISSTFPVQFISIKGPELLDKYIGKSEQGVRDLFSRAQMAKPCVLFFDEFDSVA 712
Query: 307 PRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLY 366
PRRGQ+ S+GV DRVV+Q+L +MDG + V+I+ AT R D++DPA+LRPGRLDK ++
Sbjct: 713 PRRGQD--STGVTDRVVNQILTQMDGAESLDGVYIVAATTRPDMIDPALLRPGRLDKLIF 770
Query: 367 VGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAI--- 423
L + +L VL+ + +F + + L L + AD+ S+ +A A+
Sbjct: 771 CDLPNEE-ERLEVLQKLANRFHIENAAMLKKL-STLTDGYTYADLSSLLYDAHLIAVHKL 828
Query: 424 -RRIITSA--P-QVKSAPVIVTMDDFLGACSLATAPD-KFSQSVAPDNYSLSVAPE 474
+R+ +A P Q S+ +T + A LA P+ +++Q++ + S SV E
Sbjct: 829 LKRVSINAVDPSQTTSSFTNLTTESKRNASMLALPPESRYNQNMQSMSDSKSVVIE 884
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 438 (159.2 bits), Expect = 2.8e-41, P = 2.8e-41
Identities = 100/235 (42%), Positives = 143/235 (60%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
PNV +EDIGGL K EI + G++ G+LLYGPPGTGKTL+AKAV
Sbjct: 165 PNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAKAV 224
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
ATE F+ V G EL+ K+IG+ ++++F A+ AP ++F DE+D++A +R D
Sbjct: 225 ATETNATFIRVVGSELVKKFIGEGASLVKDIFKLAKEKAPSIIFIDEIDAIAAKR--TDA 282
Query: 315 SSG---VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R + QLLAEMDG DV I+GATNR D+LDPAILRPGR D+ + V +
Sbjct: 283 LTGGDREVQRTLMQLLAEMDGFDARGDVKIIGATNRPDILDPAILRPGRFDRIIEVPAPD 342
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRI 426
++ +L +LK RK L++DV+L+ + GA++ +IC+ A AIR +
Sbjct: 343 EK-GRLEILKIHTRKMNLAEDVNLEEIAK-MTEGCVGAELKAICTEAGMNAIREL 395
>UNIPROTKB|F1RQN5 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:FP102941 EMBL:CU463172 Ensembl:ENSSSCT00000009950
Uniprot:F1RQN5
Length = 778
Score = 429 (156.1 bits), Expect = 1.5e-39, P = 1.5e-39
Identities = 90/186 (48%), Positives = 123/186 (66%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TS-GL 232
+DF Q +D++ ++ A VPNVSW DIGGL +K ++ + T G+
Sbjct: 594 KDFLQGMNDIRPSAMREV-AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPESFTQMGI 652
Query: 233 KR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
+ G+LLYGPPG KT+IAKA+A E +NFLA+KGPEL+NKY+G+SE +R +F KAR+
Sbjct: 653 QPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARA 712
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLL 351
AP ++FFDELD+LA RG + V DRV++QLL EMDG+ +DV IL ATNR D +
Sbjct: 713 VAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKDVTILAATNRPDRI 772
Query: 352 DPAILR 357
D +LR
Sbjct: 773 DKELLR 778
Score = 374 (136.7 bits), Expect = 1.4e-33, P = 1.4e-33
Identities = 95/258 (36%), Positives = 152/258 (58%)
Query: 204 VSWEDIGGL-SKLKA--EILST---FRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGL S+LK EI+ + ++ G+ G+LLYGPPGTGKT+IA+AVA
Sbjct: 344 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGISPPRGVLLYGPPGTGKTMIARAVAN 403
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E +
Sbjct: 404 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 461
Query: 317 GVMDRVVSQLLAEMDGVHT--SQ-DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ + S+ V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 462 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQ 521
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+L +L+ ++R+ L + L L + + GAD+ ++C+ A A+RR++ P
Sbjct: 522 -DRLDILQKLLRRVPHLLTEAELLQLANSAHGYV-GADLKALCNEAGLYALRRVLRKQPN 579
Query: 433 VKSAPVI----VTMDDFL 446
+ + V +T+ DFL
Sbjct: 580 LPDSKVAGLVKITLKDFL 597
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 416 (151.5 bits), Expect = 6.1e-39, P = 6.1e-39
Identities = 94/234 (40%), Positives = 138/234 (58%)
Query: 202 PNVSWEDIGGLSKLKAEI-----LSTFRG-VNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+VS+ D+GGL K E+ L +G + R G+ G+LLYGPPGTGKT++ KAV
Sbjct: 129 PDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAV 188
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A NF+ V G E + KY+G+ +R+VF AR AP ++F DE+D++A +R D
Sbjct: 189 ANSTAANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRF--DA 246
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG +V ++ ATNR D LDPA+LRPGRLD+ + Y
Sbjct: 247 QTGADREVQRILIELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYR 306
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
DR + V + + K LS +V LD+ + P SGA I +I +A A+R+
Sbjct: 307 DRRQRRLVFQTITAKMLLSPEVDLDTFIMR-PDASSGAQIAAIMQDAGLLAVRK 359
>FB|FBgn0035443 [details] [associations]
symbol:CG12010 species:7227 "Drosophila melanogaster"
[GO:0005783 "endoplasmic reticulum" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0006200 GO:GO:0016887 HSSP:Q01853
UniGene:Dm.11249 GeneID:38421 KEGG:dme:Dmel_CG12010
FlyBase:FBgn0035443 GenomeRNAi:38421 NextBio:808578
RefSeq:NP_647812.1 ProteinModelPortal:Q9VZQ0 SMR:Q9VZQ0
IntAct:Q9VZQ0 MINT:MINT-874256 STRING:Q9VZQ0 PRIDE:Q9VZQ0
UCSC:CG12010-RA InParanoid:Q9VZQ0 OMA:GCAKTTI PhylomeDB:Q9VZQ0
ArrayExpress:Q9VZQ0 Bgee:Q9VZQ0 Uniprot:Q9VZQ0
Length = 736
Score = 421 (153.3 bits), Expect = 8.9e-39, P = 8.9e-39
Identities = 109/345 (31%), Positives = 183/345 (53%)
Query: 95 IRKQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDL 154
+ + ++ F++ + + +E +RR L+++ C + +L+E+++ T G+ DL
Sbjct: 362 LHEHARRRFVREVTINMPSEGQRRQLVEHL--CEVHELNISQTLLEHIARNTQGYVIADL 419
Query: 155 TCLVRLSVKNKMLKQGINKRDLQKED-FQQIYDDLQSRYSDQLDAP-SVPNVSWEDIGGL 212
T L+R ++ +Q + K D E F + Q S D S +E IGG+
Sbjct: 420 TLLLR-----RVQQQLLTKDDFDIEHIFLKSLSQTQPSASRSTDVRVSKMTAGFEVIGGM 474
Query: 213 SKLKAEI-LSTFRGVNRTSGLKRSGL------LLYGPPGTGKTLIAKAVATECRMNFLAV 265
LK + +S G+ +++ R GL LLYGPPG KT +AK +A E M F+A
Sbjct: 475 EALKRTLQVSVLAGIRQSAAFARFGLSLPKGVLLYGPPGCAKTTVAKCLAKEADMTFIAT 534
Query: 266 KGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSG--VMDRVV 323
E+ + Y+G +E I +F AR APC++F DE+DSL RR G V R++
Sbjct: 535 SAAEVYSPYVGCAERFISRIFDTARKNAPCLIFLDEIDSLVGRRTVSSGGGGGQVQLRIL 594
Query: 324 SQLLAEMDGV---HTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVL 380
S LL EM+G+ + Q + ++ ATNR D++D A+LRPGR DK ++V +++ S+L +L
Sbjct: 595 STLLTEMNGIVGGGSQQHILVVAATNRPDMIDDALLRPGRFDKLIHVPAPDEK-SRLALL 653
Query: 381 KAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
K ++ ++V L + + SGAD+ ++C+ A A +R
Sbjct: 654 KLHSQRMPFHENVFLQEIAAR-TDRYSGADLCNLCNEAAIEAFQR 697
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 421 (153.3 bits), Expect = 9.0e-39, P = 9.0e-39
Identities = 105/304 (34%), Positives = 171/304 (56%)
Query: 138 LVEYLSSVTSGFERHDLTCLVRL-------SVKNKMLKQGINKRDLQKEDFQQIYDDLQS 190
+VE LS +T GF DLT L R S + + ++ N++++ K F+ + L+
Sbjct: 410 IVE-LSKITPGFLFKDLTKLCRTVSLLTVSSFEEEEEEENENEKEI-KISFKIFKEALKF 467
Query: 191 -RYSDQLDAP-SVPNVSWEDIGGLSKLKAEILSTFRG-VNRTSGLKR------SGLLLYG 241
+ S ++ +V NV W+ IGG ++K + KR SGLLL+G
Sbjct: 468 IKPSTLINFDVTVQNVKWDRIGGYKQVKERFRQLIEWPLKYQDTFKRLSLNNSSGLLLHG 527
Query: 242 PPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDE 301
P G GK+L+ KA+ATE +NF+++KG ++ +K++G+SE IR++F AR ++PC++FFDE
Sbjct: 528 PSGCGKSLMVKAIATEMSINFISIKGSDIYSKWLGESERIIRDLFKSARLSSPCIMFFDE 587
Query: 302 LDSLAPRRGQED--QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPG 359
+DSL RG D + G R++SQLL EMDG+ +F++G TN + +D A+LRPG
Sbjct: 588 IDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKSQIFLIGCTNSIQSIDSALLRPG 647
Query: 360 RLDKSLYVGL--YEDRISQLGVLKAVVRKF---KLSDDVSLDSLVHHFPSQMSGADIYSI 414
R + +++ L +DR+ L VL F +++ V LD S +G+ +Y +
Sbjct: 648 RFESLIHIDLPSLDDRLDILNVLSTNSLNFNKDEITQQVWLDIATQ--TSGFTGSQLYDL 705
Query: 415 CSNA 418
C+ A
Sbjct: 706 CNQA 709
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 414 (150.8 bits), Expect = 9.9e-39, P = 9.9e-39
Identities = 96/240 (40%), Positives = 143/240 (59%)
Query: 196 LDAPSVPNVSWEDIGG--LSKLK----AEILSTFRGVNRTSGLKRS-GLLLYGPPGTGKT 248
L A P+ S+ DIGG + K + E+ T + + G+ G+LLYGPPGTGKT
Sbjct: 139 LGADEKPSESYSDIGGGDIQKQEMREAVELPLTHHNLYKQIGIDPPRGVLLYGPPGTGKT 198
Query: 249 LIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
++AKAVA F+ V G E + KY+G+ +R+VF AR +P ++F DE+D++A +
Sbjct: 199 MLAKAVAHHTSAAFIRVVGSEFVQKYLGEGPRLVRDVFRLARENSPAIIFIDEIDAIATK 258
Query: 309 RGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSL 365
R D +G + R++ +LL +MDG S +V ++ ATNR D LDPA+LRPGRLD+ +
Sbjct: 259 RF--DAQTGADREVQRILMELLNQMDGFDVSVNVKVIMATNRQDTLDPALLRPGRLDRKI 316
Query: 366 YVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
L + R +L + + + K LSD+V L+ V P ++SGA+I SIC A AIR+
Sbjct: 317 EFPLPDRRQKRL-IFQVITSKMNLSDEVDLEDYVSR-PDKLSGAEIQSICQEAGMHAIRK 374
>RGD|1310478 [details] [associations]
symbol:Spata5 "spermatogenesis associated 5" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:1310478 GO:GO:0005524 GO:GO:0005737 KO:K14575
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 EMBL:CH473961 SMART:SM01073
CTD:166378 OrthoDB:EOG43FGWF EMBL:AC116183 IPI:IPI00373191
RefSeq:NP_001102019.1 UniGene:Rn.116828 Ensembl:ENSRNOT00000023584
GeneID:361935 KEGG:rno:361935 UCSC:RGD:1310478 NextBio:678104
Uniprot:D4A6T1
Length = 838
Score = 421 (153.3 bits), Expect = 1.4e-38, P = 1.4e-38
Identities = 88/183 (48%), Positives = 119/183 (65%)
Query: 180 DFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGL 232
DF Q +D++ ++ A VPNVSW DIGGL +K ++ L + +R
Sbjct: 601 DFLQGMNDIRPSAMREV-AIDVPNVSWSDIGGLENIKLKLKQAVEWPLKHPKSFSRMGIQ 659
Query: 233 KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
G+LLYGPPG KT+IAKA+A E +NFLA+KGPEL+NKY+G+SE +R VF KAR+
Sbjct: 660 PPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREVFRKARAV 719
Query: 293 APCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
AP ++FFDELD+LA RG + V DRV++QLL EMDG+ ++V +L ATNR D +D
Sbjct: 720 APSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTVLAATNRPDRID 779
Query: 353 PAI 355
I
Sbjct: 780 KII 782
Score = 386 (140.9 bits), Expect = 8.7e-35, P = 8.7e-35
Identities = 97/258 (37%), Positives = 152/258 (58%)
Query: 204 VSWEDIGGL-SKLKA--EILST---FRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGL S+LKA EI+ + ++ G+ GLLLYGPPGTGKT+IA+AVA
Sbjct: 350 VTYDMIGGLNSQLKAIREIIELPLKQPELFKSYGIPAPRGLLLYGPPGTGKTMIARAVAN 409
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E S
Sbjct: 410 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQS 467
Query: 317 GVMDRVVSQLLAEMDGVHTSQD---VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ + V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 468 EVEKRVVASLLTLMDGIGSEGSEGRVLVLGATNRPQALDAALRRPGRFDKEIEIGIPNAQ 527
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+L +L+ ++R+ L L L ++ + GAD+ ++C+ A A+RR++ P
Sbjct: 528 -DRLDILQKLLRRVPHLLTKAELLRLANNAHGYV-GADLKALCNEAGLYALRRVLRKQPN 585
Query: 433 VKSAPVI----VTMDDFL 446
+ + V +T++DFL
Sbjct: 586 LPDSKVAGMVKITLNDFL 603
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 411 (149.7 bits), Expect = 2.1e-38, P = 2.1e-38
Identities = 95/233 (40%), Positives = 141/233 (60%)
Query: 202 PNVSWEDIGGLSKLKAEI-----LSTFRG-VNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P++S+ DIGGL K E+ L G + + G+ G+L+YGPPG GKT++AKAV
Sbjct: 156 PDISYGDIGGLDMQKQEVREAVELPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAV 215
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A +F+ V G E + KY+G+ +R+VF A+ +P ++F DE+D++A +R D
Sbjct: 216 AANTAASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENSPSIIFIDEIDAIATKRF--DA 273
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG S +V ++ ATNR D LDPA+LRPGRLD+ + L +
Sbjct: 274 QTGADREVQRILLELLNQMDGFDQSTNVKVIMATNRQDTLDPALLRPGRLDRKIEFPLPD 333
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
R +L V V + LSDDV L+ V P ++SGADI SIC A +A+R
Sbjct: 334 RRQKRL-VFSTVCSRMNLSDDVDLEDWVAR-PDKISGADINSICQEAGMQAVR 384
>FB|FBgn0028686 [details] [associations]
symbol:Rpt3 "Regulatory particle triple-A ATPase 3"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0001673 "male germ cell nucleus"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:AE014298 GO:GO:0006508
GO:GO:0006974 GO:GO:0016887 GO:GO:0004175 GO:GO:0001673
GO:GO:0030163 HSSP:Q01853 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0008540 BRENDA:3.4.25.1 KO:K03063 OMA:DQTTNVK
GeneTree:ENSGT00550000074962 EMBL:AF145306 EMBL:BT046144
EMBL:FN544098 EMBL:FN544099 EMBL:FN544100 EMBL:FN544101
EMBL:FN544102 EMBL:FN544103 EMBL:FN544104 EMBL:FN544105
EMBL:FN544106 EMBL:FN544108 RefSeq:NP_572686.1 UniGene:Dm.8238
SMR:Q9V405 STRING:Q9V405 EnsemblMetazoa:FBtr0073436 GeneID:32047
KEGG:dme:Dmel_CG16916 UCSC:CG16916-RA CTD:32047 FlyBase:FBgn0028686
InParanoid:Q9V405 OrthoDB:EOG4P5HRH GenomeRNAi:32047 NextBio:776548
Uniprot:Q9V405
Length = 413
Score = 410 (149.4 bits), Expect = 2.6e-38, P = 2.6e-38
Identities = 94/234 (40%), Positives = 141/234 (60%)
Query: 202 PNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKA 253
P+VS+ DIGG+ K EI L+ F + + G+ G+L+YGPPG GKT++AKA
Sbjct: 155 PDVSYADIGGMDMQKQEIREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGKTMLAKA 213
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA +F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A +R D
Sbjct: 214 VAHHTTASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRF--D 271
Query: 314 QSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLY 370
+G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+ + L
Sbjct: 272 AQTGADREVQRILLELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFPLP 331
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ R +L V + K LS+DV L+ V P ++SGADI +IC A A+R
Sbjct: 332 DRRQKRL-VFSTITSKMNLSEDVDLEEFVAR-PDKISGADINAICQEAGMHAVR 383
>UNIPROTKB|F1MFP1 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:DAAA02044760 EMBL:DAAA02044756 EMBL:DAAA02044757
EMBL:DAAA02044758 EMBL:DAAA02044759 IPI:IPI00912761
Ensembl:ENSBTAT00000000136 Uniprot:F1MFP1
Length = 771
Score = 415 (151.1 bits), Expect = 4.9e-38, P = 4.9e-38
Identities = 87/181 (48%), Positives = 120/181 (66%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR-----TS-GL 232
+DF Q +D++ ++ A VPNVSW DIGGL +K ++ + T G+
Sbjct: 591 KDFLQGMNDIRPSAMREV-AVDVPNVSWSDIGGLENVKLKLKQAVEWPLKHPESFTQMGI 649
Query: 233 KR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARS 291
+ G+LLYGPPG KT+IAKA+A E +NFLA+KGPEL+NKY+G+SE +R +F KAR+
Sbjct: 650 QPPKGVLLYGPPGCSKTMIAKALANESGLNFLAIKGPELMNKYVGESERAVREIFRKARA 709
Query: 292 AAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLL 351
AP ++FFDELD+LA RG + V DRV++QLL EMDG+ ++V IL ATNR D +
Sbjct: 710 VAPSIIFFDELDALAVERGSSSGAGNVADRVLAQLLTEMDGIEQLKNVTILAATNRPDRI 769
Query: 352 D 352
D
Sbjct: 770 D 770
Score = 375 (137.1 bits), Expect = 1.1e-33, P = 1.1e-33
Identities = 94/258 (36%), Positives = 149/258 (57%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLYGPPGTGKTLIAKAVAT 256
V+++ IGGL+ EI + L +S G+LLYGPPGTGKT+IA+AVA
Sbjct: 341 VTYDMIGGLNSQLKEIREIIELPLKQPELFKSYGIPPPRGVLLYGPPGTGKTMIARAVAN 400
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + GPE+++K+ G++E +R +F +A P ++F DELD+L P+R E +
Sbjct: 401 EVGAYVSVINGPEIISKFYGETEARLRQIFAEATLRHPSIIFIDELDALCPKR--EGAQN 458
Query: 317 GVMDRVVSQLLAEMDGVHT--SQ-DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
V RVV+ LL MDG+ + S+ V +LGATNR LD A+ RPGR DK + +G+ +
Sbjct: 459 EVEKRVVASLLTLMDGIGSEGSEGQVLVLGATNRPHALDAALRRPGRFDKEIEIGVPNAQ 518
Query: 374 ISQLGVLKAVVRKFK-LSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+L +L+ ++R+ L + L L + + GAD+ ++C+ A A+RR++ P
Sbjct: 519 -DRLDILQKLLRRVPHLLTEAELLQLANSAHGYV-GADLKALCNEAGLHALRRVLRRQPN 576
Query: 433 V---KSAPVI-VTMDDFL 446
+ K A ++ +T+ DFL
Sbjct: 577 LPDSKMAGLVKITLKDFL 594
>UNIPROTKB|G4N5K9 [details] [associations]
symbol:MGG_13203 "ATPase" species:242507 "Magnaporthe
oryzae 70-15" [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CM001233 GO:GO:0017111 RefSeq:XP_003712009.1
ProteinModelPortal:G4N5K9 EnsemblFungi:MGG_13203T0 GeneID:5049070
KEGG:mgr:MGG_13203 Uniprot:G4N5K9
Length = 754
Score = 412 (150.1 bits), Expect = 9.5e-38, P = 9.5e-38
Identities = 101/259 (38%), Positives = 146/259 (56%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFRGVNRTSG-LKR------SGLLLYGPPGTGKTLIAKAV 254
P V W+DI G +K ++ + R +++ G LLYGPPG KT+ A+A+
Sbjct: 478 PPVRWDDISGQESVKRDLRLAVHFITRPKEEIQKFIRVPPKGFLLYGPPGCSKTMTAQAM 537
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLA-PRRGQED 313
ATE +NF AVKG ELLN Y+G+SE IR++F +AR+AAP ++FFDE+DS+A R+G
Sbjct: 538 ATESGLNFFAVKGAELLNMYVGESERQIRDLFSRARAAAPSMIFFDEIDSIAGSRKGFGS 597
Query: 314 QSSGVMDR----VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
G + V++ LL EMDG + VF+L ATNR LDPAI+RPGR D+ +YV
Sbjct: 598 DGGGATSQGGLNVLTTLLNEMDGFEDLRGVFVLAATNRPHALDPAIMRPGRFDEIIYVPP 657
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
D ++ +L+ +L+ DV L SGA++ C +A A+RR +
Sbjct: 658 -PDPAAREAILRKNSAGCQLAPDVDFARLAQ-LTEGNSGAEVAGTCQSAGKLAMRRSLDE 715
Query: 430 APQVKSAPVIVTMDDFLGA 448
P + A ++M DF A
Sbjct: 716 -PSSEGA---ISMADFEAA 730
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 202 PNVSWEDIGGLSKLKAEILS------TFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
PNV + D+GGL K E+ T + G++ G+L+YGPPGTGKT++ KAV
Sbjct: 133 PNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAV 192
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A E ++ F+ V G E + KY+G+ +R+VF AR +P ++F DE+D++A +R D
Sbjct: 193 ANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRF--DA 250
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG S +V ++ ATNR D LDPA+LRPGRLD+ + L
Sbjct: 251 QTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL-P 309
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IIT 428
DR + + + ++ K +S DV+++S V ++S ADI +I A +AIR+ IIT
Sbjct: 310 DRKQKRLIFQTIISKMNVSSDVNIESFVVR-TDKISAADIAAIAQEAGMQAIRKNRYIIT 368
Query: 429 S 429
+
Sbjct: 369 A 369
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 402 (146.6 bits), Expect = 1.9e-37, P = 1.9e-37
Identities = 93/241 (38%), Positives = 145/241 (60%)
Query: 202 PNVSWEDIGGLSKLKAEILS------TFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
PNV + D+GGL K E+ T + G++ G+L+YGPPGTGKT++ KAV
Sbjct: 133 PNVKYTDLGGLDMQKQEMKEAVELPLTCPELYEKIGIEPPMGILIYGPPGTGKTMLVKAV 192
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A E ++ F+ V G E + KY+G+ +R+VF AR +P ++F DE+D++A +R D
Sbjct: 193 ANETQVTFIGVVGSEFVQKYLGEGPRMVRDVFRLARENSPSIIFIDEVDAIATKRF--DA 250
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG S +V ++ ATNR D LDPA+LRPGRLD+ + L
Sbjct: 251 QTGADREVQRILLELLNQMDGFDKSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPL-P 309
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR---IIT 428
DR + + + ++ K +S DV+++S V ++S ADI +I A +AIR+ IIT
Sbjct: 310 DRKQKRLIFQTIISKMNVSSDVNIESFVVR-TDKISAADIAAIAQEAGMQAIRKNRYIIT 368
Query: 429 S 429
+
Sbjct: 369 A 369
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 92/235 (39%), Positives = 138/235 (58%)
Query: 202 PNVSWEDIGGLSKLKAEILS------TFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+V++ D+GGL K EI T + + G+ G+LLYGPPGTGKT++ KAV
Sbjct: 161 PDVTYADVGGLDMQKQEIREAVELPLTHFDLYKQIGIDPPRGVLLYGPPGTGKTMLVKAV 220
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A +F+ V G E + KY+G+ +R+VF AR +P ++F DE+D++A +R D
Sbjct: 221 ANSTTASFIRVNGSEFVQKYLGEGPRMVRDVFRMARENSPAIIFIDEIDAIATKRF--DA 278
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+ +
Sbjct: 279 QTGADREVQRILLELLNQMDGFEQTSNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLR 338
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSL-VHHFPSQMSGADIYSICSNAWTRAIRR 425
DR + + + K LS +V LDSL V + P +SGA I +I A RA+R+
Sbjct: 339 DRRERRLIFSTIASKMSLSPEVDLDSLIVRNEP--LSGAVIAAIMQEAGLRAVRK 391
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 90/232 (38%), Positives = 134/232 (57%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+V++ D+GGL K EI + G+ G+LLYGPPGTGKT++ KAV
Sbjct: 167 PDVTYADVGGLDMQKQEIREAVELPLVQADLYEQIGIDPPRGVLLYGPPGTGKTMLVKAV 226
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR-GQED 313
A + F+ V G E ++KY+G+ +R+VF AR AP ++F DE+DS+A +R +
Sbjct: 227 ANSTKAAFIRVNGSEFVHKYLGEGPRMVRDVFRLARENAPSIIFIDEVDSIATKRFDAQT 286
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
S + R++ +LL +MDG S +V ++ ATNR D LDPA+LRPGRLD+ + DR
Sbjct: 287 GSDREVQRILIELLTQMDGFDQSTNVKVIMATNRADTLDPALLRPGRLDRKIEFPSLRDR 346
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+ + + K L+ + LDSL+ S +SGA I +I A RA+R+
Sbjct: 347 RERRLIFGTIASKMSLAPEADLDSLIIRNDS-LSGAVIAAIMQEAGLRAVRK 397
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 400 (145.9 bits), Expect = 3.0e-37, P = 3.0e-37
Identities = 93/234 (39%), Positives = 137/234 (58%)
Query: 202 PNVSWEDIGGLSKLKAEILS------TFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+VS+ DIGG K EI T + + G+ G+LLYGPPGTGKT++AKAV
Sbjct: 150 PDVSYNDIGGCDIQKQEIREAVELPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAV 209
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A R D
Sbjct: 210 ANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEVDAIATARF--DA 267
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+ + L +
Sbjct: 268 QTGADREVQRILMELLNQMDGFDQTVNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPD 327
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
R +L V + K LSD+V L+ V P ++S A+I +IC A A+R+
Sbjct: 328 RRQKRL-VFQVCTSKMNLSDEVDLEDYVSR-PDKISAAEIAAICQEAGMHAVRK 379
>UNIPROTKB|F1MG70 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 OMA:DQTTNVK
IPI:IPI00718026 GeneTree:ENSGT00550000074962 EMBL:DAAA02047067
Ensembl:ENSBTAT00000012391 ArrayExpress:F1MG70 Uniprot:F1MG70
Length = 417
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 153 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 211
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 212 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 271
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 272 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 329
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 330 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 387
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 388 ENRYIVLAKDFEKAYKTVIKKDE 410
>UNIPROTKB|Q3T030 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 EMBL:BC102595 IPI:IPI00718026
RefSeq:NP_001030255.1 UniGene:Bt.48909 ProteinModelPortal:Q3T030
SMR:Q3T030 STRING:Q3T030 PRIDE:Q3T030 GeneID:510029 KEGG:bta:510029
CTD:5704 InParanoid:Q3T030 OrthoDB:EOG4KD6M4 NextBio:20869245
ArrayExpress:Q3T030 Uniprot:Q3T030
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>UNIPROTKB|E2RH48 [details] [associations]
symbol:PSMC4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001824 "blastocyst development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 TIGRFAMs:TIGR01242 KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 EMBL:AAEX03000950
RefSeq:XP_003638879.1 ProteinModelPortal:E2RH48 SMR:E2RH48
PRIDE:E2RH48 Ensembl:ENSCAFT00000008685 GeneID:100855613
KEGG:cfa:100855613 NextBio:20852115 Uniprot:E2RH48
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>UNIPROTKB|P43686 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001824 "blastocyst development" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0006508 "proteolysis" evidence=TAS] [GO:0016887
"ATPase activity" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0006521 "regulation of cellular amino acid metabolic process"
evidence=TAS] [GO:0006915 "apoptotic process" evidence=TAS]
[GO:0006977 "DNA damage response, signal transduction by p53 class
mediator resulting in cell cycle arrest" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=TAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005739 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 GO:GO:0001824 Reactome:REACT_383
EMBL:AC007842 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 EMBL:AF038965 EMBL:U27515 EMBL:AF020736
EMBL:BT007232 EMBL:BC000343 EMBL:BC010396 EMBL:BC014488
IPI:IPI00020042 IPI:IPI00216770 RefSeq:NP_006494.1
RefSeq:NP_694546.1 UniGene:Hs.211594 PDB:2DVW PDBsum:2DVW
ProteinModelPortal:P43686 SMR:P43686 DIP:DIP-29274N IntAct:P43686
MINT:MINT-5004247 STRING:P43686 PhosphoSite:P43686 DMDM:20532409
OGP:P43686 PaxDb:P43686 PRIDE:P43686 DNASU:5704
Ensembl:ENST00000157812 Ensembl:ENST00000455878 GeneID:5704
KEGG:hsa:5704 UCSC:uc002omq.3 UCSC:uc002omr.3 GeneCards:GC19P040477
HGNC:HGNC:9551 HPA:HPA002044 HPA:HPA005471 MIM:602707
neXtProt:NX_P43686 PharmGKB:PA33896 InParanoid:P43686
PhylomeDB:P43686 ChiTaRS:PSMC4 EvolutionaryTrace:P43686
GenomeRNAi:5704 NextBio:22160 ArrayExpress:P43686 Bgee:P43686
CleanEx:HS_PSMC4 Genevestigator:P43686 GermOnline:ENSG00000013275
Uniprot:P43686
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>UNIPROTKB|Q4R7L3 [details] [associations]
symbol:PSMC4 "26S protease regulatory subunit 6B"
species:9541 "Macaca fascicularis" [GO:0022624 "proteasome
accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:AB168803
ProteinModelPortal:Q4R7L3 SMR:Q4R7L3 PRIDE:Q4R7L3 Uniprot:Q4R7L3
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>MGI|MGI:1346093 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1346093
GO:GO:0005739 GO:GO:0005524 GO:GO:0005634 GO:GO:0030163
GO:GO:0017111 GO:GO:0001824 EMBL:CH466593 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK CTD:5704
OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962 EMBL:L76223
EMBL:AB040869 EMBL:AK077507 EMBL:AK153991 EMBL:AK160718
EMBL:AK167041 EMBL:BC012708 IPI:IPI00108895 RefSeq:NP_036004.2
UniGene:Mm.29582 PDB:3AJI PDBsum:3AJI ProteinModelPortal:P54775
SMR:P54775 IntAct:P54775 STRING:P54775 PhosphoSite:P54775
REPRODUCTION-2DPAGE:P54775 PaxDb:P54775 PRIDE:P54775
Ensembl:ENSMUST00000032824 GeneID:23996 KEGG:mmu:23996
InParanoid:Q6ZWN9 EvolutionaryTrace:P54775 NextBio:303909
Bgee:P54775 Genevestigator:P54775 GermOnline:ENSMUSG00000030603
Uniprot:P54775
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>RGD|621102 [details] [associations]
symbol:Psmc4 "proteasome (prosome, macropain) 26S subunit,
ATPase, 4" species:10116 "Rattus norvegicus" [GO:0001824
"blastocyst development" evidence=IEA;ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005739 "mitochondrion"
evidence=IEA;ISO] [GO:0006200 "ATP catabolic process" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0022624 "proteasome
accessory complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic
process" evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621102 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 GO:GO:0001824 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK CTD:5704 OrthoDB:EOG4KD6M4 GeneTree:ENSGT00550000074962
EMBL:D50695 EMBL:BC063145 IPI:IPI00210158 RefSeq:NP_476463.1
UniGene:Rn.11341 PDB:2DWZ PDBsum:2DWZ ProteinModelPortal:Q63570
SMR:Q63570 IntAct:Q63570 STRING:Q63570 PhosphoSite:Q63570
PRIDE:Q63570 Ensembl:ENSRNOT00000025819 GeneID:117262
KEGG:rno:117262 UCSC:RGD:621102 InParanoid:Q63570
EvolutionaryTrace:Q63570 NextBio:620144 Genevestigator:Q63570
GermOnline:ENSRNOG00000018994 Uniprot:Q63570
Length = 418
Score = 395 (144.1 bits), Expect = 1.0e-36, P = 1.0e-36
Identities = 96/263 (36%), Positives = 150/263 (57%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+LRPGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLRPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L + + K LS++V L+ V P ++SGADI SIC + A+R
Sbjct: 331 IEFPLPDRRQKRL-IFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQESGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>UNIPROTKB|F1SN45 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:CU457441 Ensembl:ENSSSCT00000005157 Uniprot:F1SN45
Length = 755
Score = 337 (123.7 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 83/217 (38%), Positives = 124/217 (57%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA-- 293
G+LL GPPG GKT + +AVA E LAV P L G++EEN+R VF +A+ A
Sbjct: 236 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFQRAQELAGR 295
Query: 294 -PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
P ++F DE+D+L PRRG Q+ RVV+Q+L +DG+ ++V ++G+TNR D LD
Sbjct: 296 RPTLLFLDEVDALCPRRGGPHQAPE--SRVVAQVLTLLDGISGDREVVVVGSTNRPDALD 353
Query: 353 PAILRPGRLDKSLYVGLYEDRISQL-GVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADI 411
PA+ RPGR D+ + +G + Q +L+ + K +S V L SL+ GAD+
Sbjct: 354 PALRRPGRFDREVVIGT--PTLGQRKAILQVITSKMPISSQVDL-SLLAEMTVGYVGADL 410
Query: 412 YSICSNAWTRAIRRIITSAPQVKSAPVIVTMDDFLGA 448
++C A A+ ++ S + P+I +D FL A
Sbjct: 411 TALCREA---AMHALLHSGKN-QDNPLIDEID-FLEA 442
Score = 302 (111.4 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 73/202 (36%), Positives = 111/202 (54%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--LQKEDFQQIYDDLQ-SRYSDQLDA 198
L+ +T G+ DLT L R + + +L G N+ + + + DF + + +Q S + +
Sbjct: 398 LAEMTVGYVGADLTALCREAAMHALLHSGKNQDNPLIDEIDFLEAFKKIQPSSFRSVIGL 457
Query: 199 PSVPNVSWEDIGGLS----KLKAEI---LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIA 251
V ++WE IGGL KLK I L R R + G+LLYGPPG KT +
Sbjct: 458 MDVKPITWEQIGGLEDAKRKLKQSIEWPLKFPREFVRMGLTQPKGVLLYGPPGCAKTTLV 517
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
+A+AT C +F++V G +L + ++G SE+ + VF +AR+ P VVF DE+DS+ R
Sbjct: 518 RALATSCHCSFVSVSGADLFSPFVGDSEKILSQVFQQARANTPAVVFLDEIDSILGSRSI 577
Query: 312 EDQSSGVMDRVVSQLLAEMDGV 333
V +RV+S LL E+DGV
Sbjct: 578 SKTGCNVQERVLSVLLNELDGV 599
Score = 159 (61.0 bits), Expect = 1.8e-36, Sum P(2) = 1.8e-36
Identities = 37/99 (37%), Positives = 59/99 (59%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
+ +V I+ ATNR D+LD A+LRPGRLDK +Y+ +++ S+L +L+ + + DVSL
Sbjct: 621 NSNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEK-SRLSILRVCTKNMPVGPDVSL 679
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
++L SGAD+ ++C A A++ A VK
Sbjct: 680 ENLAAE-TCLFSGADLGNLCKEAALLALQENGLEATTVK 717
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 88/241 (36%), Positives = 143/241 (59%)
Query: 202 PNVSWEDIGGLSKLKAEILS------TFRGVNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P++S+ DIGGL K EI T + + G+ G+LL+GPPG GKT++AKAV
Sbjct: 147 PDISYSDIGGLDIQKQEIREAVELPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAV 206
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A +F+ V G E + KY+G+ +R++F A+ +P ++F DE+D++A +R D
Sbjct: 207 AHHTTASFIRVVGSEFVQKYLGEGPRMVRDLFRLAKQNSPSIIFIDEIDAIATKRF--DA 264
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG + ++ ++ ATNR D LDPA+LRPGRLD+ + + L +
Sbjct: 265 QTGADREVQRILLELLNQMDGFDETTNIKVIMATNRADTLDPALLRPGRLDRKIELPLPD 324
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR--RIITS 429
R +L V + K + +DV L+ ++ P ++S ADI +IC A A+R R + +
Sbjct: 325 RRQKRL-VFTTITSKMNVGEDVDLEDIIAR-PDKISNADINAICQEAGMHAVRENRYVVN 382
Query: 430 A 430
A
Sbjct: 383 A 383
>ZFIN|ZDB-GENE-030131-5083 [details] [associations]
symbol:psmc4 "proteasome (prosome, macropain) 26S
subunit, ATPase, 4" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR005937
Pfam:PF00004 SMART:SM00382 ZFIN:ZDB-GENE-030131-5083 GO:GO:0005524
GO:GO:0005737 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 EMBL:BC055215 IPI:IPI00509630
UniGene:Dr.76514 ProteinModelPortal:Q7SXX0 SMR:Q7SXX0 STRING:Q7SXX0
PRIDE:Q7SXX0 InParanoid:Q7SXX0 ArrayExpress:Q7SXX0 Bgee:Q7SXX0
Uniprot:Q7SXX0
Length = 418
Score = 391 (142.7 bits), Expect = 2.7e-36, P = 2.7e-36
Identities = 97/263 (36%), Positives = 149/263 (56%)
Query: 196 LDAPSVPNVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRS-GLLLYGPPGTGK 247
L + P+V + DIGG+ K E+ L+ F + + G+ G+L+YGPPG GK
Sbjct: 154 LTSDQKPDVLYSDIGGMDIQKQEVREAVELPLTHFE-LYKQIGIDPPRGVLMYGPPGCGK 212
Query: 248 TLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAP 307
T++AKAVA F+ V G E + KY+G+ +R+VF A+ AP ++F DE+D++A
Sbjct: 213 TMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIAT 272
Query: 308 RRGQEDQSSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKS 364
+R D +G + R++ +LL +MDG + +V ++ ATNR D LDPA+L PGRLD+
Sbjct: 273 KRF--DAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLCPGRLDRK 330
Query: 365 LYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L + R +L V + K LS++V L+ V P ++SGADI SIC A A+R
Sbjct: 331 IEFPLPDRRQKRL-VFSTITSKMNLSEEVDLEDYVAR-PDKISGADINSICQEAGMLAVR 388
Query: 425 --RIITSAPQVKSA-PVIVTMDD 444
R I A + A ++ D+
Sbjct: 389 ENRYIVLAKDFEKAYKTVIKKDE 411
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 361 (132.1 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 85/230 (36%), Positives = 135/230 (58%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRG--VNRTS----GLKR-SGLLLYGPPGTGKTLIAKAVA 255
NVS+ +GGLS E+ + +N G+K G+LLYGPPGTGKTL+A+A+A
Sbjct: 136 NVSYSAVGGLSDQIRELRESIELPLMNPELFLRVGIKPPKGVLLYGPPGTGKTLLARAIA 195
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
+ NFL + +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 196 SNIDANFLKIVSSAIIDKYIGESARLIREMFGYARDHQPCIIFMDEIDAIGGRRFSEGTS 255
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL ++DG V ++ ATNR D+LDPA+LRPGRLD+ + + L ++
Sbjct: 256 ADREIQRTLMELLNQLDGFDELGKVKMIMATNRPDVLDPALLRPGRLDRKIEIPLPNEQ- 314
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ VLK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 315 ARMEVLKIHAAGIAKHGEIDYEAVVK-LAEGFNGADLRNVCTEAGMAAIR 363
Score = 46 (21.3 bits), Expect = 2.7e-36, Sum P(2) = 2.7e-36
Identities = 17/61 (27%), Positives = 29/61 (47%)
Query: 133 GFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDLQSRY 192
G DA+ +SVT + + L C L + +++ + K+DF + DDL+S
Sbjct: 4 GEDAAAARRRASVTE-YRKKLLNCR-ELESRVSTVRENLKNA---KKDFTKTEDDLKSLQ 58
Query: 193 S 193
S
Sbjct: 59 S 59
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 179 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 238
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 297
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 298 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 357
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 358 KTKKR-IFQIHTSRMTLADDVTLDELIMA-KDDLSGADIKAICTEAGLMALR 407
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 178 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 237
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 238 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 296
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 297 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 356
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 357 KTKKR-IFQIHTSRMTLADDVTLDELIMA-KDDLSGADIKAICTEAGLMALR 406
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 107 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 166
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 167 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 225
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 226 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 285
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 286 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 335
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 88/232 (37%), Positives = 136/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDDLIMA-KDDLSGADIKAICTEAGLMALR 408
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 102/296 (34%), Positives = 165/296 (55%)
Query: 140 EYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN-KRDLQKEDF-QQIYDDLQSR-YSDQL 196
+++ T+G R+ + C R S+ + LKQG D+ +Q+ ++ Y
Sbjct: 85 KFIVKATNG-PRYVVGC--RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSH 141
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRG--VN----RTSGLKR-SGLLLYGPPGTGKTL 249
+ P N+S+ D+GGL++ E+ +N + G+ G LL+GPPGTGKTL
Sbjct: 142 EDPG--NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTL 199
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+A+AVA++ NFL V +++KYIG+S IR +F AR PC+VF DE+D++ RR
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRR 259
Query: 310 GQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
E S+ + R + +LL ++DG + V ++ ATNR D LDPA+LRPGRLD+ + +G
Sbjct: 260 FSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIG 319
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
L ++ S+L +LK K ++ +++V S AD+ ++C+ A AIR
Sbjct: 320 LPNEQ-SRLEILKIHSNKITKHGEIDFEAVVK-LSDGFSAADLRNVCTEAGMFAIR 373
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 389 (142.0 bits), Expect = 4.4e-36, P = 4.4e-36
Identities = 102/296 (34%), Positives = 165/296 (55%)
Query: 140 EYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN-KRDLQKEDF-QQIYDDLQSR-YSDQL 196
+++ T+G R+ + C R S+ + LKQG D+ +Q+ ++ Y
Sbjct: 85 KFIVKATNG-PRYVVGC--RRSINKEELKQGTRVSLDMTTLTIMRQLPREVDPLVYKMSH 141
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRG--VN----RTSGLKR-SGLLLYGPPGTGKTL 249
+ P N+S+ D+GGL++ E+ +N + G+ G LL+GPPGTGKTL
Sbjct: 142 EDPG--NISYSDVGGLAEQIRELREVVELPLINPELFKRVGITPPKGCLLFGPPGTGKTL 199
Query: 250 IAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR 309
+A+AVA++ NFL V +++KYIG+S IR +F AR PC+VF DE+D++ RR
Sbjct: 200 LARAVASQLDCNFLKVVSSAIVDKYIGESARMIREMFNYARDHQPCIVFMDEIDAIGGRR 259
Query: 310 GQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
E S+ + R + +LL ++DG + V ++ ATNR D LDPA+LRPGRLD+ + +G
Sbjct: 260 FSEGTSADREIQRTLMELLNQLDGFDSLGKVKVIMATNRPDTLDPALLRPGRLDRKIEIG 319
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
L ++ S+L +LK K ++ +++V S AD+ ++C+ A AIR
Sbjct: 320 LPNEQ-SRLEILKIHSNKITKHGEIDFEAVVK-LSDGFSAADLRNVCTEAGMFAIR 373
>UNIPROTKB|E1BSZ5 [details] [associations]
symbol:KATNAL1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 CTD:84056 KO:K07767
OMA:GVMQQIQ GeneTree:ENSGT00550000074466 EMBL:AADN02005228
IPI:IPI00589186 RefSeq:XP_417114.1 UniGene:Gga.16694
ProteinModelPortal:E1BSZ5 PRIDE:E1BSZ5 Ensembl:ENSGALT00000027595
GeneID:418920 KEGG:gga:418920 NextBio:20822044 Uniprot:E1BSZ5
Length = 489
Score = 351 (128.6 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 92/240 (38%), Positives = 136/240 (56%)
Query: 202 PNVSWEDIGGLSKLK-----AEILSTFRGVNRTSGLKR--SGLLLYGPPGTGKTLIAKAV 254
P++ W+DI L + K A +L + + G++R G+L+ GPPGTGKT++AKAV
Sbjct: 202 PSIHWDDIADLEEAKKLLREAVVLPMWMP-DFFKGIRRPWKGVLMVGPPGTGKTMLAKAV 260
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
ATEC F V L +KY G+SE+ +R +F AR AP +F DE+DS+ RRG D+
Sbjct: 261 ATECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPATIFIDEIDSICSRRGTSDE 320
Query: 315 SSGVMDRVVSQLLAEMDGV-------HTSQDVFILGATNRVDLLDPAILRPGRLDKSLYV 367
RV S+LL +MDGV S+ V +L ATN +D A+ R RL+K +Y+
Sbjct: 321 HEASR-RVKSELLVQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYI 377
Query: 368 GLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRII 427
L + + +LK +R+ +L D+SL+ + SGADI ++C +A A+RR I
Sbjct: 378 PLPTAK-GRAELLKINLREVELDPDISLEEIAEKIEGY-SGADITNVCRDASLMAMRRRI 435
Score = 54 (24.1 bits), Expect = 4.4e-36, Sum P(2) = 4.4e-36
Identities = 22/85 (25%), Positives = 42/85 (49%)
Query: 129 GGDYG----FDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINK-RDLQKEDFQQ 183
G DY +D+S+V Y V +RH C S+++ +K + R E+++Q
Sbjct: 13 GRDYALIGNYDSSMV-YYQGVIQQIQRH---CQ---SIRDPAIKGKWQQVRQELVEEYEQ 65
Query: 184 IYDDLQSRYSDQLDAPSVPNVSWED 208
+ + + S ++D P+ VS++D
Sbjct: 66 VKSIVDTLESFKMDRPADIPVSYQD 90
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 88/234 (37%), Positives = 136/234 (58%)
Query: 202 PNVSWEDIGGLSKLKAEI-----LSTFRG-VNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+V++ D+GGL K EI L +G + G+ G+LLYGPPGTGKT++ KAV
Sbjct: 150 PDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAV 209
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A +F+ + G E + KY+G+ +R+VF AR +P ++F DE+D++A +R D
Sbjct: 210 ANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRF--DA 267
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG + V ++ ATNR D LDPA+LRPGRLD+ + +
Sbjct: 268 QTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLK 327
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
DR + + + K L+ + LDSL+ +SGA I +I A RA+R+
Sbjct: 328 DRRERRLIFSTIASKMSLAPEADLDSLIIR-NDPLSGAVIAAIMQEAGLRAVRK 380
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 388 (141.6 bits), Expect = 5.7e-36, P = 5.7e-36
Identities = 88/234 (37%), Positives = 136/234 (58%)
Query: 202 PNVSWEDIGGLSKLKAEI-----LSTFRG-VNRTSGLKRS-GLLLYGPPGTGKTLIAKAV 254
P+V++ D+GGL K EI L +G + G+ G+LLYGPPGTGKT++ KAV
Sbjct: 150 PDVTYADVGGLDMQKQEIKEAVELPLTQGDLYSQIGIDPPRGVLLYGPPGTGKTMLVKAV 209
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A +F+ + G E + KY+G+ +R+VF AR +P ++F DE+D++A +R D
Sbjct: 210 ANSTTASFIRINGSEFVQKYLGEGPRMVRDVFRLARENSPAIIFIDEIDAIATKRF--DA 267
Query: 315 SSGV---MDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+G + R++ +LL +MDG + V ++ ATNR D LDPA+LRPGRLD+ + +
Sbjct: 268 QTGADREVQRILLELLNQMDGFDQTSTVKVIMATNRADTLDPALLRPGRLDRKIEFPSLK 327
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
DR + + + K L+ + LDSL+ +SGA I +I A RA+R+
Sbjct: 328 DRRERRLIFSTIASKMSLAPEADLDSLIIR-NDPLSGAVIAAIMQEAGLRAVRK 380
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 103/292 (35%), Positives = 162/292 (55%)
Query: 178 KEDFQQIYDDLQSRYSDQLD---APSVPNVSWEDIGGLSKLKAEILSTFR------GVNR 228
K D +Y L ++ + VP+ +++ +GGL K EI +
Sbjct: 112 KPDSHDLYKILPTKVDPLVSLMMVEKVPDSTYDMVGGLDKQIKEIKEVIELPVKHPELFE 171
Query: 229 TSGLKR-SGLLLYGPPGTGKTLIAKAVA--TECRMNFLAVKGPELLNKYIGQSEENIRNV 285
+ G+ + G++LYGPPGTGKTL+A+AVA TEC+ F+ V G EL+ KYIG+ +R +
Sbjct: 172 SLGIAQPKGVILYGPPGTGKTLLARAVAHHTECK--FIRVSGSELVQKYIGEGSRMVREL 229
Query: 286 FLKARSAAPCVVFFDELDSLAPRRGQEDQSSG--VMDRVVSQLLAEMDGVHTSQDVFILG 343
F+ AR AP ++F DE+DS+ R E S G + R + +LL ++DG +S+D+ I+
Sbjct: 230 FVMAREHAPSIIFMDEIDSIGSSR-VEGSSGGDSEVQRTMLELLNQLDGFESSKDIKIIM 288
Query: 344 ATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFP 403
ATNR+D+LDPA+LRPGR+D+ + ++ +LK R L+ ++L +
Sbjct: 289 ATNRLDILDPALLRPGRIDRKIEFPA-PTVAARTDILKIHSRSMNLTRGINLRKIAEKM- 346
Query: 404 SQMSGADIYSICSNAWTRAIR--RI-ITSAP-QVKSAPVIVTMDDFLGACSL 451
+ SGAD+ +C+ A A+R RI +T ++ A V+ DD GA SL
Sbjct: 347 NGCSGADVKGVCTEAGMYALRERRIHVTQEDFELAVAKVMSKNDD--GAVSL 396
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 135 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 194
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 195 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 254
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 255 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 313
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 314 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 362
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 321
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 370
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 121 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 180
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 181 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 240
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 241 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 299
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 300 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 348
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 387 (141.3 bits), Expect = 7.2e-36, P = 7.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 143 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 321
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 370
>UNIPROTKB|I3LLQ8 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0004222 "metalloendopeptidase
activity" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0006508 GO:GO:0040014 GO:GO:0004222 GO:GO:0042552
GO:GO:0007409 GO:GO:0030163 GeneTree:ENSGT00530000063070
GO:GO:0017111 GO:GO:0042407 GO:GO:0008053 GO:GO:0034982
TIGRFAMs:TIGR01241 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675
GO:GO:0060013 EMBL:FP565334 Ensembl:ENSSSCT00000025900
Uniprot:I3LLQ8
Length = 597
Score = 389 (142.0 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 86/241 (35%), Positives = 133/241 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK--RSGLLLYGPPGTGKTLIAKAVA 255
+V ++D+ G + K EI+ + G K + G +L GPPGTGKTL+AKA A
Sbjct: 95 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKKGAILTGPPGTGKTLLAKATA 154
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-Q 314
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 155 GEANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFG 214
Query: 315 SSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ ++QLL EMDG +T+ +V IL TNR D+LDPA+LRPGR D+ +++G D
Sbjct: 215 GQSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGP-PDIK 273
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAP 431
+ + K +R KL + + L S SGAD+ ++C+ A A R + S
Sbjct: 274 GRASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSIN 333
Query: 432 Q 432
Q
Sbjct: 334 Q 334
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 386 (140.9 bits), Expect = 9.2e-36, P = 9.2e-36
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
NVS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 NVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLGNVCTEAGMFAIR 356
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 389 (142.0 bits), Expect = 1.0e-35, P = 1.0e-35
Identities = 102/332 (30%), Positives = 171/332 (51%)
Query: 107 INVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKM 166
+ V E +R ++Q + D D ++ ++ +G+ DL L R + +
Sbjct: 191 VEVSTPNEEDRLKILQLYTKKVNLDPSVD---LQAIAISCNGYVGADLEALCREATISAS 247
Query: 167 LKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGV 226
K+ + L +DF+ I + ++ +P V+W+D+GGL LK ++
Sbjct: 248 -KRSSDSLILTSQDFK-IAKSVVGPSINRGITVEIPKVTWDDVGGLKDLKKKLQQAVEWP 305
Query: 227 NRTS------GLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSE 279
+ S G+ G+LL+GPPG KT +AKA A + +F ++ EL + Y+G+ E
Sbjct: 306 IKHSAAFVKMGISPMRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGE 365
Query: 280 ENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS--SGVMDRVVSQLLAEMDGVHTSQ 337
+RN F +AR A+P ++FFDE D +A +RG E S S V +R++S LL EMDG+ ++
Sbjct: 366 ALLRNTFQRARLASPSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMDGLEEAK 425
Query: 338 DVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDS 397
+ +L ATNR +D A++RPGR D LYV D ++ +L+ R L DDV L
Sbjct: 426 GILVLAATNRPYAIDAALMRPGRFDLVLYVPP-PDLEARFEILQVHTRNMTLGDDVDLRK 484
Query: 398 LVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ +GA++ +C + T ++R I +
Sbjct: 485 IAEE-TDLFTGAELEGLCRESGTVSLRENIAA 515
Score = 294 (108.6 bits), Expect = 2.1e-23, P = 2.1e-23
Identities = 88/259 (33%), Positives = 128/259 (49%)
Query: 203 NVSWE---DIGG----LSKLKAEILSTFRGV--NRTSGLK-RSGLLLYGPPGTGKTLIAK 252
N W +IGG L L+ I+ FR RT GLK GLLLYGPPGTGKT + +
Sbjct: 15 NEKWRAEAEIGGNERALQALRELIIFPFRYPLEARTLGLKWPRGLLLYGPPGTGKTSLVR 74
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA----PCVVFFDELDSLAPR 308
AV EC + + + + + G+SE+ +R F +A S A P V+F DE+D L PR
Sbjct: 75 AVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEASSHAVSDKPSVIFIDEIDVLCPR 134
Query: 309 RGQEDQSSGVMDRVVSQLLAEMDGVHTSQD---VFILGATNRVDLLDPAILRPGRLDKSL 365
R + R+ SQL MD S V ++ +TNRVD +DPA+ R GR D +
Sbjct: 135 RDARREQDV---RIASQLFTLMDSNKPSSSAPRVVVVASTNRVDAIDPALRRAGRFDALV 191
Query: 366 YVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
V + +L +L+ +K L V L ++ + GAD+ ++C A A +R
Sbjct: 192 EVSTPNEE-DRLKILQLYTKKVNLDPSVDLQAIAISCNGYV-GADLEALCREATISASKR 249
Query: 426 ----IITSAPQVKSAPVIV 440
+I ++ K A +V
Sbjct: 250 SSDSLILTSQDFKIAKSVV 268
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 385 (140.6 bits), Expect = 1.2e-35, P = 1.2e-35
Identities = 87/232 (37%), Positives = 135/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A P +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHGPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + L+DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKKR-IFQIHTSRMTLADDVTLDELIMA-KDDLSGADIKAICTEAGLMALR 408
>UNIPROTKB|F1N9N5 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 TIGRFAMs:TIGR01241
OMA:LYRFVTT EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00683486 Ensembl:ENSGALT00000016639 ArrayExpress:F1N9N5
Uniprot:F1N9N5
Length = 635
Score = 389 (142.0 bits), Expect = 1.4e-35, P = 1.4e-35
Identities = 86/234 (36%), Positives = 131/234 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 148 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAG 207
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 208 EANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 267
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA++RPGR D+ +Y+G D
Sbjct: 268 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGP-PDIKG 326
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRI 426
+ + K +R KL + D+L S SGADI ++C+ A A R +
Sbjct: 327 RASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHL 380
>UNIPROTKB|F6UUI0 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
Ensembl:ENSCAFT00000021792 EMBL:AAEX03016099 Uniprot:F6UUI0
Length = 789
Score = 332 (121.9 bits), Expect = 7.4e-28, P = 7.4e-28
Identities = 80/213 (37%), Positives = 118/213 (55%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA-- 293
G+LL GPPG GKT + +AVA E LAV P L G++EEN+R VF +AR A
Sbjct: 270 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASR 329
Query: 294 -PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
P ++F DE+D+L PRRG ++ R V+Q+L +DG+ +DV ++ +TNR D LD
Sbjct: 330 GPTLLFLDEVDALCPRRGGAHRAPE--SRAVAQVLTLLDGIRGDRDVVVVASTNRPDALD 387
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
PA+ RPGR D+ + +G + + +L+ + K +S V L SL+ GAD+
Sbjct: 388 PALRRPGRFDREVVIGTPTLK-QRKAILQVITSKMPISSQVDL-SLLAEMTVGYVGADLT 445
Query: 413 SICSNAWTRAIRRIITSAPQVKSAPVIVTMDDF 445
++C A A+ ++ S K P I D F
Sbjct: 446 ALCREA---ALHALLHSEKN-KDNPAIDETDFF 474
Score = 297 (109.6 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 78/231 (33%), Positives = 120/231 (51%)
Query: 113 TEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN 172
T +R+ ++Q + D SL L+ +T G+ DLT L R + + +L N
Sbjct: 406 TLKQRKAILQVITSKMPISSQVDLSL---LAEMTVGYVGADLTALCREAALHALLHSEKN 462
Query: 173 KRD--LQKEDFQQIYDDLQ-SRYSDQLDAPSVPNVSWEDIGGLS----KLKAEI---LST 222
K + + + DF + + +Q S + + + V WE IGGL KLK I L
Sbjct: 463 KDNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKF 522
Query: 223 FRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENI 282
R R + G+LLYGPPG KT + +A+AT C +F++V G +L + ++G SE+ +
Sbjct: 523 PREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVL 582
Query: 283 RNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
VF +AR+ P +VF DE+DS+ R V +RV+S LL E+DGV
Sbjct: 583 SQVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDGV 633
Score = 157 (60.3 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
+++V I+ ATNR D+LD A+LRPGRLDK +Y+ +++ +L +LK + + DVSL
Sbjct: 655 NRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEK-GRLSILKVCTKNMPMGPDVSL 713
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
+++ SGAD+ ++C A A++ A VK
Sbjct: 714 ENIAAE-TCFFSGADLGNLCKEAALLALQENGLEATTVK 751
>CGD|CAL0005257 [details] [associations]
symbol:RPT2 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045732 "positive regulation
of protein catabolic process" evidence=IEA] [GO:0043171 "peptide
catabolic process" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 CGD:CAL0005257 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 EMBL:AACQ01000051 EMBL:AACQ01000050
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03062 RefSeq:XP_717718.1
RefSeq:XP_717812.1 ProteinModelPortal:Q5A7M6 STRING:Q5A7M6
GeneID:3640525 GeneID:3640683 KEGG:cal:CaO19.12895
KEGG:cal:CaO19.5440 Uniprot:Q5A7M6
Length = 465
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 95/248 (38%), Positives = 140/248 (56%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYG PGTGKTL+AKAV
Sbjct: 181 PTESYADIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 240
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL + G EL+ KY+G R +F A AP +VF DE+D++ +R E
Sbjct: 241 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFQIAADHAPSIVFIDEIDAIGTKR-YEST 299
Query: 315 SSGVMD--RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE- 371
S G + R + +LL ++DG D+ ++ ATN+++ LDPA++RPGR+D+ + L+E
Sbjct: 300 SGGEREIQRTMLELLNQLDGFDDRGDIKVIMATNKIESLDPALIRPGRIDRKI---LFEN 356
Query: 372 -DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR--RIIT 428
D ++ +L K L+DDV+LD +V +SGADI +IC+ A A+R R+
Sbjct: 357 PDANTKKKILTIHTSKMSLADDVNLDEIVTG-KDDLSGADIKAICTEAGLLALRERRMQV 415
Query: 429 SAPQVKSA 436
A KSA
Sbjct: 416 KAEDFKSA 423
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 83/233 (35%), Positives = 137/233 (58%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
+P+ +++ +GGL K EI + + G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 139 IPDSTYDMVGGLDKQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 198
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ RG+
Sbjct: 199 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFIMAREHAPSIIFMDEIDSIGSSRGESG 258
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
G + R + +LL ++DG +++++ +L TNR+D+LDPA+LRPGR+D+ +
Sbjct: 259 SGGGDSEVQRTMLELLNQLDGFESTKNIKVLMCTNRIDILDPALLRPGRIDRKIEFPNPG 318
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D +L +LK RK L+ ++L + + SGA++ ++C+ A A+R
Sbjct: 319 DA-GRLDILKIHSRKMNLTRGINLKKISDKM-NGASGAELKAVCTEAGMYALR 369
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 89/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
+VS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 SVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIELPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK D+ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHSGPITKHGDIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>UNIPROTKB|Q9Y4W6 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9606 "Homo
sapiens" [GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008219
"cell death" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0007409 "axonogenesis" evidence=IEA] [GO:0007528
"neuromuscular junction development" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0021675 "nerve
development" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0051082 "unfolded protein binding" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005739 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0008219 DrugBank:DB00171 GO:GO:0007528 GO:GO:0051082
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 eggNOG:COG0465
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 GO:GO:0021675 GO:GO:0060013 EMBL:Y18314 EMBL:BC065016
IPI:IPI00001091 RefSeq:NP_006787.2 UniGene:Hs.726355 PDB:2LNA
PDBsum:2LNA ProteinModelPortal:Q9Y4W6 SMR:Q9Y4W6 IntAct:Q9Y4W6
MINT:MINT-1161944 STRING:Q9Y4W6 MEROPS:M41.007 PhosphoSite:Q9Y4W6
DMDM:126302516 PaxDb:Q9Y4W6 PeptideAtlas:Q9Y4W6 PRIDE:Q9Y4W6
Ensembl:ENST00000269143 GeneID:10939 KEGG:hsa:10939 UCSC:uc002kqz.2
GeneCards:GC18M012328 H-InvDB:HIX0027367 HGNC:HGNC:315
HPA:HPA004479 HPA:HPA004480 MIM:604581 MIM:610246 MIM:614487
neXtProt:NX_Q9Y4W6 Orphanet:101109 PharmGKB:PA24612
InParanoid:Q9Y4W6 PhylomeDB:Q9Y4W6 GenomeRNAi:10939 NextBio:41551
ArrayExpress:Q9Y4W6 Bgee:Q9Y4W6 CleanEx:HS_AFG3L2
Genevestigator:Q9Y4W6 GermOnline:ENSG00000141385 Uniprot:Q9Y4W6
Length = 797
Score = 391 (142.7 bits), Expect = 2.2e-35, P = 2.2e-35
Identities = 87/240 (36%), Positives = 132/240 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 363
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 364 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 423
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA+LRPGR D+ +++G D
Sbjct: 424 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGP-PDIKG 482
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAPQ 432
+ + K +R KL + D L S SGAD+ ++C+ A A R + S Q
Sbjct: 483 RASIFKVHLRPLKLDSTLEKDKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQ 542
>UNIPROTKB|Q9BVQ7 [details] [associations]
symbol:SPATA5L1 "Spermatogenesis-associated protein 5-like
protein 1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000223225
GO:GO:0017111 EMBL:AC025580 HOVERGEN:HBG001226 CTD:79029
OMA:TWEQIGG OrthoDB:EOG42RD70 EMBL:AK022348 EMBL:AK023232
EMBL:AK291457 EMBL:AC090527 EMBL:BC000981 IPI:IPI00031608
IPI:IPI00386906 IPI:IPI00890778 RefSeq:NP_076968.2
UniGene:Hs.369657 ProteinModelPortal:Q9BVQ7 SMR:Q9BVQ7
STRING:Q9BVQ7 PhosphoSite:Q9BVQ7 DMDM:292495038 PaxDb:Q9BVQ7
PRIDE:Q9BVQ7 Ensembl:ENST00000305560 Ensembl:ENST00000531970
Ensembl:ENST00000559860 GeneID:79029 KEGG:hsa:79029 UCSC:uc001zve.3
GeneCards:GC15P045694 H-InvDB:HIX0012209 HGNC:HGNC:28762
HPA:HPA043679 neXtProt:NX_Q9BVQ7 PharmGKB:PA134923477
InParanoid:Q9BVQ7 PhylomeDB:Q9BVQ7 GenomeRNAi:79029 NextBio:67739
Bgee:Q9BVQ7 CleanEx:HS_SPATA5L1 Genevestigator:Q9BVQ7
Uniprot:Q9BVQ7
Length = 753
Score = 333 (122.3 bits), Expect = 4.8e-28, P = 4.8e-28
Identities = 83/216 (38%), Positives = 121/216 (56%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA-- 293
G+LL GPPG GKT + +AVA E LAV P L G++EEN+R VF +AR A
Sbjct: 236 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGSRPGETEENVRRVFQRARELASR 295
Query: 294 -PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
P ++F DE+D+L P+RG S RVV+Q+L +DG ++V ++GATNR D LD
Sbjct: 296 GPSLLFLDEMDALCPQRGSRAPES----RVVAQVLTLLDGASGDREVVVVGATNRPDALD 351
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
PA+ RPGR D+ + +G + + +L+ + K +S V L L + GAD+
Sbjct: 352 PALRRPGRFDREVVIGTPTLK-QRKEILQVITSKMPISSHVDLGLLAEMTVGYV-GADLT 409
Query: 413 SICSNAWTRAIRRIITSAPQVKSAPVIVTMDDFLGA 448
++C A A+ ++ S + PVI +D FL A
Sbjct: 410 ALCREA---AMHALLHSEKN-QDNPVIDEID-FLEA 440
Score = 293 (108.2 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 65/202 (32%), Positives = 113/202 (55%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--LQKEDFQQIYDDLQ-SRYSDQLDA 198
L+ +T G+ DLT L R + + +L N+ + + + DF + + ++Q S + +
Sbjct: 396 LAEMTVGYVGADLTALCREAAMHALLHSEKNQDNPVIDEIDFLEAFKNIQPSSFRSVIGL 455
Query: 199 PSVPNVSWEDIGGLSKLKAEILSTFRGVNR------TSGLKR-SGLLLYGPPGTGKTLIA 251
+ V WE+IGGL +K ++ + + GL + G+LLYGPPG KT +
Sbjct: 456 MDIKPVDWEEIGGLEDVKLKLKQSIEWPLKFPWEFVRMGLTQPKGVLLYGPPGCAKTTLV 515
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
+A+AT C +F++V G +L + ++G SE+ + +F +AR++ P ++F DE+DS+ R
Sbjct: 516 RALATSCHCSFVSVSGADLFSPFVGDSEKVLSQIFRQARASTPAILFLDEIDSILGARSA 575
Query: 312 EDQSSGVMDRVVSQLLAEMDGV 333
V +RV+S LL E+DGV
Sbjct: 576 SKTGCDVQERVLSVLLNELDGV 597
Score = 159 (61.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 38/99 (38%), Positives = 57/99 (57%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
++ V I+ ATNR D+LD A+LRPGRLDK +Y+ D +L +LK + + DVSL
Sbjct: 619 NRSVMIIAATNRPDVLDTALLRPGRLDKIIYIPP-PDHKGRLSILKVCTKTMPIGPDVSL 677
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
++L SGAD+ ++C+ A A++ A VK
Sbjct: 678 ENLAAE-TCFFSGADLRNLCTEAALLALQENGLDATTVK 715
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 90/255 (35%), Positives = 144/255 (56%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 137 VPDSTYEMVGGLDKQIQEIKEVIELPVKHPELFDALGITQPKGVLLYGPPGTGKTLLARA 196
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
VA TEC F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R +
Sbjct: 197 VAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARLE 254
Query: 312 EDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+ R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 255 TGTGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDVLDQALLRPGRIDRKIEFPPPN 314
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR--RIITS 429
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R R+ +
Sbjct: 315 EE-ARLDILKIHSRKMNLTRGINLRKIAEEMPGA-SGAEVKGVCTEAGMYALRERRVHVT 372
Query: 430 APQVKSAPVIVTMDD 444
+ A V M D
Sbjct: 373 QEDFEMAVSKVMMKD 387
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 88/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
+VS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 143 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 202
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 203 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 262
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 263 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 321
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 322 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 370
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 382 (139.5 bits), Expect = 2.4e-35, P = 2.4e-35
Identities = 88/230 (38%), Positives = 136/230 (59%)
Query: 203 NVSWEDIGGLSKLKAEI-------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVA 255
+VS+ +IGGLS+ E+ L+ R + G LLYGPPGTGKTL+A+AVA
Sbjct: 129 DVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVA 188
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 189 SQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTS 248
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG T V ++ ATNR D LDPA+LRPGRLD+ +++ L ++
Sbjct: 249 ADREIQRTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQ- 307
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK ++ +++V +GAD+ ++C+ A AIR
Sbjct: 308 ARLDILKIHAGPITKHGEIDYEAIVK-LSDGFNGADLRNVCTEAGMFAIR 356
>UNIPROTKB|F1NG80 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 OMA:TWEQIGG
EMBL:AADN02041604 IPI:IPI00596203 Ensembl:ENSGALT00000009112
Uniprot:F1NG80
Length = 748
Score = 376 (137.4 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 94/270 (34%), Positives = 142/270 (52%)
Query: 197 DAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLK-RSGLLLYGPPGTGKTLIAKAVA 255
D +P +D+G K ++ F + GL +G+LL GPPG GKTL+ KAVA
Sbjct: 193 DTAKIPVAGLDDVGESLKEMVDLPFRFPRTFKKLGLSVPNGVLLVGPPGVGKTLLVKAVA 252
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA---PCVVFFDELDSLAPRRGQE 312
E L + GP L G+SEEN+R+VF K R + P V+F DE+D+L P+RG
Sbjct: 253 REAGAYLLCISGPALYGSRPGESEENLRSVFEKGREMSCEGPTVLFIDEIDALCPKRGSS 312
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
+ S DR+V+QLL +DGV + ++ ATNR D LDPA+ RPGR D+ + +G
Sbjct: 313 N--SAPEDRLVAQLLTLLDGVGRKDRMVVVAATNRPDALDPALRRPGRFDREVIIGT-PT 369
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+ +L+ + +S D+ L L + GAD+ ++C A A++ + S+
Sbjct: 370 LTQRRSILQMLTCSMPISTDIDLVKLAEMTTGYV-GADLTALCREA---AMQAVFHSS-- 423
Query: 433 VKSAPVIVTMDDFLGACSLATAPDKFSQSV 462
+ SA V++ M DF A P F ++
Sbjct: 424 LDSAEVLINMADFQEAFK-KIQPSSFRSAI 452
Score = 326 (119.8 bits), Expect = 3.8e-27, Sum P(2) = 3.8e-27
Identities = 79/231 (34%), Positives = 122/231 (52%)
Query: 113 TEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN 172
T +RR ++Q L C D LV+ L+ +T+G+ DLT L R + + ++
Sbjct: 369 TLTQRRSILQ-MLTC-SMPISTDIDLVK-LAEMTTGYVGADLTALCREAAMQAVFHSSLD 425
Query: 173 KRD--LQKEDFQQIYDDLQ-SRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRT 229
+ + DFQ+ + +Q S + + ++WE IGGL +K ++ + +
Sbjct: 426 SAEVLINMADFQEAFKKIQPSSFRSAIGLKECKPITWEQIGGLEDVKLKLKQSVEWPMKL 485
Query: 230 S------GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENI 282
GL R G+LLYGP G KT + KAVAT C +FL+V G EL + Y+G SE+ +
Sbjct: 486 PQAFARMGLARPKGVLLYGPSGCAKTTLVKAVATSCHCSFLSVSGAELFSPYVGDSEKIL 545
Query: 283 RNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
VF +AR+ P ++F DE+DS+ R GV +RV+S LL E+DGV
Sbjct: 546 SQVFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVSERVLSVLLNELDGV 596
Score = 170 (64.9 bits), Expect = 1.6e-08, Sum P(2) = 1.6e-08
Identities = 61/207 (29%), Positives = 99/207 (47%)
Query: 230 SGLKRSGLLLYGP-PGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
S L SG L+ P G + ++++ V + R N A+ + ++ +G + +
Sbjct: 524 SFLSVSGAELFSPYVGDSEKILSQ-VFRQARANTPAIIFLDEIDSILGSRSHSKSGHGVS 582
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHT-SQDVFILGATNR 347
R + V +ELD + + V +R ++L E++ T S+D ++ ATNR
Sbjct: 583 ERVLS---VLLNELDGVGLK---------VTERRGNKLQLELEFQETLSRDFMVVAATNR 630
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
D+LD A+LRPGRLD+ +Y+ D +L +LK K L DVSL + S
Sbjct: 631 PDMLDDALLRPGRLDRVIYIPP-PDLKGRLSILKICTEKIPLDTDVSLQDIAAR-TDLFS 688
Query: 408 GADIYSICSNAWTRAIRRIITSAPQVK 434
GADI ++C A A++ A VK
Sbjct: 689 GADIENLCKEAALLALQENGLEATAVK 715
Score = 38 (18.4 bits), Expect = 2.5e-35, Sum P(2) = 2.5e-35
Identities = 6/17 (35%), Positives = 11/17 (64%)
Query: 13 EDILSHLLTNYFATPRY 29
++ + LLTN + +P Y
Sbjct: 124 QEAVRDLLTNVYVSPHY 140
>TIGR_CMR|CPS_3452 [details] [associations]
symbol:CPS_3452 "ATP-dependent metalloprotease FtsH"
species:167879 "Colwellia psychrerythraea 34H" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004222 "metalloendopeptidase
activity" evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005886 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006200 GO:GO:0006508
GO:GO:0004222 GO:GO:0016887 EMBL:CP000083 GenomeReviews:CP000083_GR
GO:GO:0030163 eggNOG:COG0465 HOGENOM:HOG000217277
TIGRFAMs:TIGR01241 KO:K03798 MEROPS:M41.001 OMA:RSIIDQC
RefSeq:YP_270126.1 ProteinModelPortal:Q47YJ4 SMR:Q47YJ4
STRING:Q47YJ4 GeneID:3519317 KEGG:cps:CPS_3452 PATRIC:21469851
BioCyc:CPSY167879:GI48-3480-MONOMER Uniprot:Q47YJ4
Length = 660
Score = 387 (141.3 bits), Expect = 2.9e-35, P = 2.9e-35
Identities = 88/245 (35%), Positives = 142/245 (57%)
Query: 195 QLDAPSVPNVSWEDIGGLSKLK---AEILSTFRGVNR---TSGLKRSGLLLYGPPGTGKT 248
QL + ++ D+ G + K AE++ R +R G SG+LL G PGTGKT
Sbjct: 143 QLSEEQI-KTTFADVAGCDEAKEDVAELVDYLREPSRFQKLGGRIPSGILLVGQPGTGKT 201
Query: 249 LIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
L+AKA+A E ++ F + G + + ++G +R++F +A+ AAPC++F DE+D++ +
Sbjct: 202 LLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQAKKAAPCIIFIDEIDAVGRQ 261
Query: 309 RGQEDQSSGVMDR--VVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLY 366
RG G +R ++Q+L EMDG ++ V ++ ATNR D+LDPA+LRPGR D+ +
Sbjct: 262 RGA-GMGGGHDEREQTLNQMLVEMDGFEGNEGVIVIAATNRPDVLDPALLRPGRFDRQVT 320
Query: 367 VGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAW---TRAI 423
VGL + R + +LK +RK L DDV + + P SGAD+ ++ + A R
Sbjct: 321 VGLPDIR-GREQILKVHMRKVPLGDDVKAEVIARGTPG-FSGADLANLVNEAALCAARTA 378
Query: 424 RRIIT 428
RR+++
Sbjct: 379 RRVVS 383
>ASPGD|ASPL0000010049 [details] [associations]
symbol:AN4236 species:162425 "Emericella nidulans"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 EMBL:BN001302 GO:GO:0030163
GO:GO:0017111 EMBL:AACD01000068 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP OrthoDB:EOG40VZZ2
RefSeq:XP_661840.1 ProteinModelPortal:Q5B5E4 STRING:Q5B5E4
EnsemblFungi:CADANIAT00004422 GeneID:2873654 KEGG:ani:AN4236.2
Uniprot:Q5B5E4
Length = 465
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 99/308 (32%), Positives = 163/308 (52%)
Query: 129 GGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRDLQKEDFQQIYDDL 188
G + DA+ V + + + + L+ L V ++ LK G + + K+ + I D L
Sbjct: 133 GANIDLDATRVGKSAVIKTSTRQTIYLPLIGL-VDHEKLKPG-DLIGVNKDSYL-ILDTL 189
Query: 189 QSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF----RGVNRTS--GLKR-SGLL 238
+ Y +++ A V P + DIGGL K EI+ + R G+K G L
Sbjct: 190 PAEYDNRVKAMEVDEKPTEKYTDIGGLDKQIEEIVEAIVWPMKEAERFKKLGIKAPKGAL 249
Query: 239 LYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVF 298
+YGPPGTGKTL+A+A A E FL + GP+L+ +IG + +R+ F A+ AP ++F
Sbjct: 250 MYGPPGTGKTLLARACAAETNATFLKLAGPQLVQMFIGDGAKLVRDCFALAKEKAPSIIF 309
Query: 299 FDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILR 357
DELD++ +R ++S + R + +LL ++DG + + +L ATNRVD+LDPA+LR
Sbjct: 310 IDELDAVGTKRFDSEKSGDREVQRTMLELLNQLDGFASDDRIKVLAATNRVDVLDPALLR 369
Query: 358 PGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSN 417
GRLD+ + L + ++ +L+ RK + D V+ L + GA + ++C
Sbjct: 370 SGRLDRKIEFPLPNEE-ARANILQIHSRKMTVEDSVNWAELARS-TDEFGGAQLKAVCVE 427
Query: 418 AWTRAIRR 425
A A+R+
Sbjct: 428 AGMIALRK 435
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 89/235 (37%), Positives = 139/235 (59%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 142 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 201
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
VA TEC F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 202 VAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSR-I 258
Query: 312 EDQSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E S G + R + +LL ++DG ++++ ++ ATNR+D+LDPA+LRPGR+D+ +
Sbjct: 259 ESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPP 318
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 319 PNEE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 371
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 381 (139.2 bits), Expect = 3.1e-35, P = 3.1e-35
Identities = 87/235 (37%), Positives = 140/235 (59%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL K EI V G+ + G+LL+GPPGTGKTL+A+A
Sbjct: 153 VPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLFGPPGTGKTLLARA 212
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
VA TEC F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 213 VAHHTEC--TFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-V 269
Query: 312 EDQSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E S G + R + +LL ++DG ++++ ++ ATNR+D+LDPA+LRPGR+D+ +
Sbjct: 270 EGSSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPA 329
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ ++ +LK RK L +++ + P SGA++ S+C+ A A+R
Sbjct: 330 PDEK-ARADILKIHSRKMNLMRGINMAKIAEQIPGA-SGAEVKSVCTEAGMFALR 382
>UNIPROTKB|E1BZ74 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005743 "mitochondrial
inner membrane" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0016265 "death" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0042407 "cristae formation" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0060013 "righting
reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0008270 GO:GO:0006508
GO:GO:0040014 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 GO:GO:0016265
GO:GO:0060013 EMBL:AADN02058877 EMBL:AADN02058878 EMBL:AADN02058879
IPI:IPI00603273 Ensembl:ENSGALT00000022474 ArrayExpress:E1BZ74
Uniprot:E1BZ74
Length = 805
Score = 389 (142.0 bits), Expect = 3.7e-35, P = 3.7e-35
Identities = 86/234 (36%), Positives = 131/234 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 304 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYEDLGAKIPKGAILTGPPGTGKTLLAKATAG 363
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 364 EANVPFITVNGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 423
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA++RPGR D+ +Y+G D
Sbjct: 424 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIYIGP-PDIKG 482
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRI 426
+ + K +R KL + D+L S SGADI ++C+ A A R +
Sbjct: 483 RASIFKVHLRPLKLDTVLDKDNLARKLASLTPGFSGADIANVCNEAALIAARHL 536
>UNIPROTKB|F8W938 [details] [associations]
symbol:NVL "Nuclear valosin-containing protein-like"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0016235
"aggresome" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005730 GO:GO:0016235
GO:GO:0017111 EMBL:AC092809 HGNC:HGNC:8070 ChiTaRS:NVL
IPI:IPI01012615 ProteinModelPortal:F8W938 SMR:F8W938
Ensembl:ENST00000361463 ArrayExpress:F8W938 Bgee:F8W938
Uniprot:F8W938
Length = 589
Score = 383 (139.9 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 101/289 (34%), Positives = 159/289 (55%)
Query: 163 KNKMLKQGINKRDLQKEDFQQIYDDLQSRYSDQLDAPS----VPNVSWEDIGGLSKLKAE 218
K K+ +G +KR +KED Q++ ++++ + A + NV +ED+GG E
Sbjct: 114 KGKLKNKG-SKR--KKEDLQEVDGEIEAVLQKKAKARGLEFQISNVKFEDVGGNDMTLKE 170
Query: 219 I---LSTFRG--VNRTSGL-KRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLN 272
+ L R V G+ G+LL+GPPG GKTL+A A+A E + L V PE+++
Sbjct: 171 VCKMLIHMRHPEVYHHLGVVPPRGVLLHGPPGCGKTLLAHAIAGELDLPILKVAAPEIVS 230
Query: 273 KYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMD- 331
G+SE+ +R +F +A S APC++F DE+D++ P+R E S + R+V+QLL MD
Sbjct: 231 GVSGESEQKLRELFEQAVSNAPCIIFIDEIDAITPKR--EVASKDMERRIVAQLLTCMDD 288
Query: 332 --GVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKL 389
V + V ++GATNR D LDPA+ R GR D+ + +G+ D S+ +L+ + RK +L
Sbjct: 289 LNNVAATARVLVIGATNRPDSLDPALRRAGRFDREICLGI-PDEASRERILQTLCRKLRL 347
Query: 390 SDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAP-QVKSAP 437
L H P + GAD+ ++C A A+ R++ Q K P
Sbjct: 348 PQAFDFCHLAHLTPGFV-GADLMALCREAAMCAVNRVLMKLQEQQKKNP 395
Score = 316 (116.3 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 62/121 (51%), Positives = 86/121 (71%)
Query: 200 SVPNVSWEDIGGLSKLKAE----ILSTFRGVNRTSGL---KRSGLLLYGPPGTGKTLIAK 252
+VPNV+W DIG L ++ E IL+ R ++ L +G+LL GPPG GKTL+AK
Sbjct: 468 TVPNVTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 527
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E +NF++VKGPELLN Y+G+SE +R VF +A+++APCV+FFDE+D+L PRR
Sbjct: 528 AVANESGLNFISVKGPELLNMYVGESERAVRQVFQRAKNSAPCVIFFDEVDALCPRRSDR 587
Query: 313 D 313
+
Sbjct: 588 E 588
Score = 38 (18.4 bits), Expect = 2.7e-26, Sum P(2) = 2.7e-26
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 141 YLSSVTSGFERHDLTCLVR---LSVKNKMLK--QGINKRDLQKED 180
+L+ +T GF DL L R + N++L Q K++ + ED
Sbjct: 355 HLAHLTPGFVGADLMALCREAAMCAVNRVLMKLQEQQKKNPEMED 399
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 91/232 (39%), Positives = 134/232 (57%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYGPPGTGKTL+AKAV
Sbjct: 188 PLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAV 247
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A E FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R E
Sbjct: 248 ANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR-YEAT 306
Query: 315 SSGVMD--RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR+D LDPA++RPGR+D+ + + D
Sbjct: 307 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP-NPD 365
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ + + K +S DV L+ V ++SGADI +IC+ A A+R
Sbjct: 366 TKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLALR 416
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 91/232 (39%), Positives = 134/232 (57%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYGPPGTGKTL+AKAV
Sbjct: 188 PLESYADIGGLESQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAV 247
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A E FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R E
Sbjct: 248 ANETSATFLRVVGSELIQKYLGDGPKLVREMFKVAEEHAPSIVFIDEIDAVGTKR-YEAT 306
Query: 315 SSGVMD--RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR+D LDPA++RPGR+D+ + + D
Sbjct: 307 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIDSLDPALIRPGRIDRKIQLP-NPD 365
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ + + K +S DV L+ V ++SGADI +IC+ A A+R
Sbjct: 366 TKTKRRIFQIHTSKMTMSPDVDLEEFVMS-KDELSGADIKAICTEAGLLALR 416
>ZFIN|ZDB-GENE-050522-514 [details] [associations]
symbol:katna1 "katanin p60 (ATPase-containing)
subunit A 1" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0031122 "cytoplasmic microtubule organization" evidence=IMP]
[GO:0048675 "axon extension" evidence=IGI;IMP] [GO:0030496
"midbody" evidence=ISS] [GO:0000922 "spindle pole" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0005819 "spindle"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0005815 "microtubule organizing center" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-050522-514
GO:GO:0005524 GO:GO:0005737 GO:GO:0051301 GO:GO:0007067
GO:GO:0005815 HSSP:Q01853 eggNOG:COG0464 GO:GO:0008568
InterPro:IPR015415 Pfam:PF09336 GO:GO:0000922 GO:GO:0005874
GO:GO:0031122 HOVERGEN:HBG057074 GO:GO:0048676 EMBL:BX255904
KO:K07767 HAMAP:MF_03023 HOGENOM:HOG000225142
GeneTree:ENSGT00550000074466 CTD:11104 OrthoDB:EOG4CJVGZ
EMBL:BC095321 IPI:IPI00500630 RefSeq:NP_001018440.1
UniGene:Dr.78566 ProteinModelPortal:Q5RII9
Ensembl:ENSDART00000043316 GeneID:553631 KEGG:dre:553631
InParanoid:Q5RII9 OMA:IMERDIL NextBio:20880368 Bgee:Q5RII9
Uniprot:Q5RII9
Length = 485
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 105/281 (37%), Positives = 160/281 (56%)
Query: 202 PNVSWEDIGGLSK----LKAEILSTFRGVNRTSGLKR--SGLLLYGPPGTGKTLIAKAVA 255
PNV+W+DI L + LK ++ G++R G+L+ GPPGTGKTL+AKAVA
Sbjct: 199 PNVTWDDIADLEEAKKLLKEAVVLPMWMPEFFKGIRRPWKGVLMVGPPGTGKTLLAKAVA 258
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
TECR F V L +KY G+SE+ +R +F AR AP +F DE+DS+ RRG ++
Sbjct: 259 TECRTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRRGTSEEH 318
Query: 316 SGVMDRVVSQLLAEMDGVH-TSQD-----VFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
RV ++LL +MDGV TS++ V +L ATN +D A+ R RL+K +Y+ L
Sbjct: 319 EASR-RVKAELLVQMDGVGGTSENDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPL 375
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITS 429
+ ++ +LK +++ L++DV++D + SGADI ++C +A A+RR I
Sbjct: 376 PSAK-GRVDLLKINLKELDLANDVNMDKIAEQMEGY-SGADITNVCRDASLMAMRRRIEG 433
Query: 430 -APQ-VKSAP-----VIVTMDDFLGACSLATAPDKFSQSVA 463
P+ +++ P + TM+DF TA K S+SV+
Sbjct: 434 LTPEEIRNLPKDEMHMPTTMEDF------ETALKKVSKSVS 468
>POMBASE|SPAC3A11.12c [details] [associations]
symbol:rpt5 "19S proteasome regulatory subunit Rpt5
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPAC3A11.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0007346 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 GO:GO:0008540
OMA:GALMYGP EMBL:AB012136 PIR:T11634 RefSeq:XP_001713083.1
ProteinModelPortal:O14126 STRING:O14126 PRIDE:O14126
EnsemblFungi:SPAC3A11.12c.1 GeneID:3361462 KEGG:spo:SPAC3A11.12c
OrthoDB:EOG40VZZ2 NextBio:20811506 Uniprot:O14126
Length = 438
Score = 379 (138.5 bits), Expect = 5.1e-35, P = 5.1e-35
Identities = 89/258 (34%), Positives = 145/258 (56%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILSTFRGVN-RT 229
+D I D L S Y ++ A V P + DIGGLSK +A +L + R
Sbjct: 154 KDSYLIIDKLPSEYDSRVKAMEVDEKPTERYSDIGGLSKQIEELFEAIVLPMQQADKFRK 213
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+K G L++GPPGTGKTL+A+A A + FL + P+L+ +IG + +R+ F
Sbjct: 214 LGVKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLVRDAFAL 273
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ +P ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 274 AKEKSPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFSSDDRVKVIAATNR 333
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD LDPA+LR GRLD+ L L + +++G+L+ RK + DD++ + L + +
Sbjct: 334 VDTLDPALLRSGRLDRKLEFPLPNEE-ARVGILRIHSRKMAIDDDINWEELARS-TDEYN 391
Query: 408 GADIYSICSNAWTRAIRR 425
GA + S+C A A+R+
Sbjct: 392 GAMLKSVCVEAGMIALRQ 409
>ZFIN|ZDB-GENE-070912-46 [details] [associations]
symbol:afg3l2 "AFG3 ATPase family gene 3-like 2 (S.
cerevisiae)" species:7955 "Danio rerio" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-070912-46 GO:GO:0016021 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 GO:GO:0017111 TIGRFAMs:TIGR01241
CTD:10939 MEROPS:M41.007 EMBL:BX000484 EMBL:BC155655
IPI:IPI00513225 RefSeq:NP_001104667.1 UniGene:Dr.82691 SMR:A9JRG9
STRING:A9JRG9 Ensembl:ENSDART00000089834 GeneID:569168
KEGG:dre:569168 NextBio:20889547 Uniprot:A9JRG9
Length = 800
Score = 387 (141.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 83/234 (35%), Positives = 133/234 (56%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 299 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 358
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F+ AR APC++F DE+D++ +RG+ +
Sbjct: 359 EANVPFITVNGSEFLEMFVGVGPARVRDLFVLARKNAPCILFIDEIDAVGRKRGRGNFGG 418
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V +L TNR D+LDPA++RPGR D+ +Y+G D
Sbjct: 419 QSEQENTLNQLLVEMDGFNTATNVVVLAGTNRPDILDPALMRPGRFDRQIYIGP-PDIKG 477
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRI 426
+ + K +R KL ++ ++L + SGADI ++C+ A A R +
Sbjct: 478 RASIFKVHLRPLKLEAELDKEALARKMAALTPGFSGADIANVCNEAALIAARHL 531
>MGI|MGI:1916847 [details] [associations]
symbol:Afg3l2 "AFG3(ATPase family gene 3)-like 2 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0007005 "mitochondrion organization" evidence=IGI] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007528 "neuromuscular junction
development" evidence=IMP] [GO:0008053 "mitochondrial fusion"
evidence=IGI] [GO:0008233 "peptidase activity" evidence=IEA]
[GO:0008237 "metallopeptidase activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0016265 "death" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0021675 "nerve development" evidence=IMP]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IGI] [GO:0040014
"regulation of multicellular organism growth" evidence=IMP]
[GO:0042407 "cristae formation" evidence=IGI] [GO:0042552
"myelination" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048747 "muscle fiber development" evidence=IMP]
[GO:0060013 "righting reflex" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1916847
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0046872
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
CTD:10939 OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
MEROPS:M41.007 EMBL:BC036999 EMBL:BC043056 IPI:IPI00170357
RefSeq:NP_081406.1 UniGene:Mm.426052 ProteinModelPortal:Q8JZQ2
SMR:Q8JZQ2 IntAct:Q8JZQ2 STRING:Q8JZQ2 PhosphoSite:Q8JZQ2
PaxDb:Q8JZQ2 PRIDE:Q8JZQ2 Ensembl:ENSMUST00000025408 GeneID:69597
KEGG:mmu:69597 UCSC:uc008fmf.1 InParanoid:Q8JZQ2 NextBio:329880
Bgee:Q8JZQ2 CleanEx:MM_AFG3L2 Genevestigator:Q8JZQ2
GermOnline:ENSMUSG00000024527 Uniprot:Q8JZQ2
Length = 802
Score = 387 (141.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 85/234 (36%), Positives = 130/234 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 362
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 363 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 422
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA+LRPGR D+ +++G D
Sbjct: 423 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGP-PDIKG 481
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRI 426
+ + K +R KL + D L S SGAD+ ++C+ A A R +
Sbjct: 482 RASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 535
>UNIPROTKB|F1LN92 [details] [associations]
symbol:Afg3l2 "Protein Afg3l2" species:10116 "Rattus
norvegicus" [GO:0004222 "metalloendopeptidase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005743
"mitochondrial inner membrane" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0007528 "neuromuscular junction development"
evidence=IEA] [GO:0008053 "mitochondrial fusion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016021 "integral
to membrane" evidence=IEA] [GO:0016265 "death" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0021675 "nerve development" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0042552 "myelination" evidence=IEA] [GO:0060013
"righting reflex" evidence=IEA] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1305259
GO:GO:0016021 GO:GO:0005524 GO:GO:0005743 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
IPI:IPI00192903 RefSeq:NP_001128336.1 UniGene:Rn.8386
ProteinModelPortal:F1LN92 PRIDE:F1LN92 Ensembl:ENSRNOT00000024632
GeneID:307350 KEGG:rno:307350 NextBio:657254 ArrayExpress:F1LN92
Uniprot:F1LN92
Length = 802
Score = 387 (141.3 bits), Expect = 6.0e-35, P = 6.0e-35
Identities = 85/234 (36%), Positives = 130/234 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 303 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 362
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 363 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 422
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA+LRPGR D+ +++G D
Sbjct: 423 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALLRPGRFDRQIFIGP-PDIKG 481
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRI 426
+ + K +R KL + D L S SGAD+ ++C+ A A R +
Sbjct: 482 RASIFKVHLRPLKLDSALEKDKLARKLASLTPGFSGADVANVCNEAALIAARHL 535
>UNIPROTKB|F1NLN4 [details] [associations]
symbol:SPATA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005737
GeneTree:ENSGT00700000104502 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 SMART:SM01073 OMA:NDIRPSA
EMBL:AADN02009235 IPI:IPI00593232 Ensembl:ENSGALT00000019309
Uniprot:F1NLN4
Length = 704
Score = 385 (140.6 bits), Expect = 6.4e-35, P = 6.4e-35
Identities = 100/277 (36%), Positives = 155/277 (55%)
Query: 188 LQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTSGLKRS-------GLLLY 240
+++R + D+ P V+++ IGGLS I T + + L +S G+LLY
Sbjct: 299 IEARMNIAEDSDHGPQVTYDMIGGLSSQLKTIRETVELPLKRAELFKSYGISPPRGVLLY 358
Query: 241 GPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFD 300
GPPGTGKTLIAKA+A E + + GPE+++K+ G+SE +R +F +A P ++F D
Sbjct: 359 GPPGTGKTLIAKAIANEVGAHVTVINGPEIISKFYGESESRLRQIFAEASLRRPSIIFID 418
Query: 301 ELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHT--SQ-DVFILGATNRVDLLDPAILR 357
ELD+L P+R E + V RVV+ LL MDG+ + S+ + +LGATNR LD A+ R
Sbjct: 419 ELDALCPKR--EGAQNEVEKRVVASLLTLMDGIGSEGSEGQLVVLGATNRPHALDAALRR 476
Query: 358 PGRLDKSLYVGL--YEDRISQLG-VLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSI 414
PGR DK + +G+ +DR+ L +LK V ++ + L H + GAD+ ++
Sbjct: 477 PGRFDKEIEIGIPNAQDRLDILQKLLKKVPHSLTAAEMMQLADSAHGYV----GADLAAL 532
Query: 415 CSNAWTRAIRRII-----TSAPQVKSAPVIVTMDDFL 446
C A A+RR + S +V + V++ +DFL
Sbjct: 533 CKEAGLYALRRALGKRAHPSDTEVAGS-VMIAFNDFL 568
Score = 298 (110.0 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 64/138 (46%), Positives = 88/138 (63%)
Query: 180 DFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNR------TSGLK 233
DF Q D++ ++ A VP VSW DIGGL +K ++ + G++
Sbjct: 566 DFLQGMKDVRPSAMREV-AVDVPKVSWSDIGGLEDVKLKLKQAVEWPLKHPDSFIRMGIQ 624
Query: 234 R-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSA 292
G+LLYGPPG KT+IAKA+A E +NFLAVKGPEL+NKY+G+SE +R +F KAR
Sbjct: 625 PPKGVLLYGPPGCSKTMIAKALAHESGLNFLAVKGPELMNKYVGESERAVREIFRKARMV 684
Query: 293 APCVVFFDELDSLAPRRG 310
+P ++FFDE+D+LA RG
Sbjct: 685 SPSILFFDEIDALAVERG 702
>UNIPROTKB|Q55700 [details] [associations]
symbol:ftsH2 "ATP-dependent zinc metalloprotease FtsH 2"
species:1111708 "Synechocystis sp. PCC 6803 substr. Kazusa"
[GO:0010206 "photosystem II repair" evidence=IMP] [GO:0042651
"thylakoid membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009523 "photosystem II" evidence=IDA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005524
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111 TIGRFAMs:TIGR01241
EMBL:BA000022 GenomeReviews:BA000022_GR GO:GO:0042651 GO:GO:0010206
HOGENOM:HOG000217276 KO:K03798 PIR:S76378 RefSeq:NP_442160.1
RefSeq:YP_005652219.1 ProteinModelPortal:Q55700 SMR:Q55700
IntAct:Q55700 STRING:Q55700 MEROPS:M41.017 GeneID:12253438
GeneID:952628 KEGG:syn:slr0228 KEGG:syy:SYNGTS_2266 PATRIC:23841938
OMA:NTASTRM Uniprot:Q55700
Length = 627
Score = 382 (139.5 bits), Expect = 8.0e-35, P = 8.0e-35
Identities = 92/263 (34%), Positives = 153/263 (58%)
Query: 189 QSRYSDQLDAPSVPNVSWEDIGGLSKLKAEI--LSTF-RGVNRTS--GLK-RSGLLLYGP 242
+S+ Q+DA + V ++D+ G+ + K E+ + TF + R + G K G+LL GP
Sbjct: 156 KSKARFQMDAKT--GVMFDDVAGIDEAKEELQEVVTFLKQPERFTAVGAKIPKGVLLVGP 213
Query: 243 PGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDEL 302
PGTGKTL+AKA+A E + F ++ G E + ++G +R++F KA+ APC++F DE+
Sbjct: 214 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCLIFIDEI 273
Query: 303 DSLAPRRGQE-DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRL 361
D++ +RG + ++ ++QLL EMDG + + I+ ATNR D+LD A++RPGR
Sbjct: 274 DAVGRQRGAGIGGGNDEREQTLNQLLTEMDGFEGNTGIIIIAATNRPDVLDSALMRPGRF 333
Query: 362 DKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTR 421
D+ + V D + +L+ R KL+ +VS+DS+ P SGAD+ ++ + A
Sbjct: 334 DRQVMVDA-PDYSGRKEILEVHARNKKLAPEVSIDSIARRTPG-FSGADLANLLNEA--- 388
Query: 422 AIRRIITSAPQVKSAPVIVTMDD 444
I +A + KSA ++ +DD
Sbjct: 389 ----AILTARRRKSAITLLEIDD 407
>UNIPROTKB|F1MWE0 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:DAAA02041602 IPI:IPI00701790
UniGene:Bt.49089 Ensembl:ENSBTAT00000028983 NextBio:20868523
Uniprot:F1MWE0
Length = 456
Score = 342 (125.4 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 68/191 (35%), Positives = 116/191 (60%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPC 295
G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F A+ AP
Sbjct: 239 GVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFALAKEKAPS 298
Query: 296 VVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPA 354
++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNRVD+LDPA
Sbjct: 299 IIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNRVDILDPA 358
Query: 355 ILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSI 414
+LR GRLD+ + + + ++ +++ RK +S DV+ + L +GA ++
Sbjct: 359 LLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFNGAQCKAV 416
Query: 415 CSNAWTRAIRR 425
C A A+RR
Sbjct: 417 CVEAGMIALRR 427
Score = 51 (23.0 bits), Expect = 8.1e-35, Sum P(2) = 8.1e-35
Identities = 14/44 (31%), Positives = 21/44 (47%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEI 219
+D I + L + Y ++ A V P + DIGGL K E+
Sbjct: 156 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQEV 199
>DICTYBASE|DDB_G0284415 [details] [associations]
symbol:psmC3 "26S proteasome ATPase 3 subunit"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0284415 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GenomeReviews:CM000153_GR GO:GO:0030163 GO:GO:0000502
HSSP:Q01853 GO:GO:0017111 EMBL:AAFI02000064 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
RefSeq:XP_638617.1 ProteinModelPortal:Q54PN7 STRING:Q54PN7
PRIDE:Q54PN7 EnsemblProtists:DDB0232967 GeneID:8624588
KEGG:ddi:DDB_G0284415 InParanoid:Q54PN7 OMA:GALMYGP
ProtClustDB:CLSZ2433711 Uniprot:Q54PN7
Length = 421
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 90/267 (33%), Positives = 147/267 (55%)
Query: 170 GINKRDLQKEDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILS 221
GINK D I D L Y ++ A + P + DIGGL K ++A +L
Sbjct: 134 GINK------DSYIILDTLPPEYDSRVKAMEIDEKPTEEYSDIGGLDKQIQELVEAVVLP 187
Query: 222 -TFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSE 279
T + + G+K G+L+YGPPGTGKTL+A+A A + +L + GP+L+ +IG
Sbjct: 188 MTHKERFESIGIKPPKGVLMYGPPGTGKTLLARACAAQTNSTYLKLAGPQLVQMFIGDGA 247
Query: 280 ENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQD 338
+ +R+ F A+ P ++F DELD++ +R + S + R + +LL ++DG + +
Sbjct: 248 KLVRDAFALAKEKGPTIIFIDELDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDAN 307
Query: 339 VFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSL 398
+ ++ ATNR+D+LDPA+LR GRLD+ + L + ++ +L+ RK +S DV+ D L
Sbjct: 308 IKVIAATNRIDILDPALLRSGRLDRKIEFPLPNEE-ARAHILQIHSRKMNVSADVNFDEL 366
Query: 399 VHHFPSQMSGADIYSICSNAWTRAIRR 425
+GA + ++C A A+RR
Sbjct: 367 ARS-SEDFNGAQLKAVCVEAGMIALRR 392
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 89/232 (38%), Positives = 134/232 (57%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYG PGTGKTL+AKAV
Sbjct: 179 PTESYSDIGGLEAQVQEMKEAIELPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAV 238
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R + Q
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVADECAPSIVFIDEIDAVGTKR-YDSQ 297
Query: 315 SSGVMD--RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG DV ++ ATNR++ LDPA++RPGR+D+ + L D
Sbjct: 298 SGGEREIQRTMLELLNQLDGFDARTDVKVIMATNRIETLDPALIRPGRIDRKIEFPL-PD 356
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ + + K LS+DV+L+ V +SGADI +IC+ + A+R
Sbjct: 357 IKTKRKIFEIHTAKMNLSEDVNLEEFVMS-KDDLSGADIKAICTESGLLALR 407
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 377 (137.8 bits), Expect = 8.3e-35, P = 8.3e-35
Identities = 86/232 (37%), Positives = 135/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYG PGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + ++DDV+LD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKRR-IFQIHTSRMTVADDVTLDDLILA-KDDLSGADIKAICTEAGLMALR 408
>UNIPROTKB|Q2KJI7 [details] [associations]
symbol:AFG3L2 "AFG3-like protein 2" species:9913 "Bos
taurus" [GO:0060013 "righting reflex" evidence=IEA] [GO:0042552
"myelination" evidence=IEA] [GO:0042407 "cristae formation"
evidence=IEA] [GO:0040014 "regulation of multicellular organism
growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005524 GO:GO:0005743 GO:GO:0046872 GO:GO:0007528
GO:GO:0008270 GO:GO:0006508 GO:GO:0040014 GO:GO:0004222
GO:GO:0042552 GO:GO:0007409 GO:GO:0030163 MEROPS:M41.016
eggNOG:COG0465 GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 KO:K08956 OrthoDB:EOG4SBDXC GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:BC105322 IPI:IPI00686580 RefSeq:NP_001039676.1 UniGene:Bt.1657
HSSP:Q9WZ49 ProteinModelPortal:Q2KJI7 SMR:Q2KJI7 STRING:Q2KJI7
PRIDE:Q2KJI7 Ensembl:ENSBTAT00000031029 GeneID:515757
KEGG:bta:515757 CTD:10939 InParanoid:Q2KJI7 OMA:LYRFVTT
NextBio:20871990 GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
Uniprot:Q2KJI7
Length = 805
Score = 385 (140.6 bits), Expect = 1.0e-34, P = 1.0e-34
Identities = 85/240 (35%), Positives = 132/240 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 364
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 365 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 424
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA++RPGR D+ +++G D
Sbjct: 425 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGP-PDIKG 483
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAPQ 432
+ + K +R KL + + L S SGAD+ ++C+ A A R + S Q
Sbjct: 484 RASIFKVHLRPLKLDSTLEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQ 543
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 86/232 (37%), Positives = 134/232 (57%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYGPPGTGKTL+AKAV
Sbjct: 179 PQETYADIGGLDTQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGPPGTGKTLLAKAV 238
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 239 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAVGTKR-YDSN 297
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 298 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 357
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + L++DV+L L+ +SGADI +IC+ A A+R
Sbjct: 358 KTKRR-IFTIHTSRMTLAEDVNLSELIMA-KDDLSGADIKAICTEAGLMALR 407
>SGD|S000002165 [details] [associations]
symbol:RPT2 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IMP] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=IDA] [GO:0045732 "positive regulation of
protein catabolic process" evidence=IDA] [GO:0043171 "peptide
catabolic process" evidence=IMP] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002165 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0016887 GO:GO:0043171 GO:GO:0006511
GO:GO:0045732 EMBL:Z48432 GO:GO:0070682 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T
PDBsum:4B4T KO:K03062 OMA:FIRNQER GeneTree:ENSGT00550000074818
OrthoDB:EOG4FN7S6 EMBL:X81070 EMBL:L17040 EMBL:Z74055 PIR:S46613
RefSeq:NP_010277.1 ProteinModelPortal:P40327 SMR:P40327
DIP:DIP-6282N IntAct:P40327 MINT:MINT-632695 STRING:P40327
PaxDb:P40327 PeptideAtlas:P40327 PRIDE:P40327 EnsemblFungi:YDL007W
GeneID:851557 KEGG:sce:YDL007W NextBio:968983 Genevestigator:P40327
GermOnline:YDL007W Uniprot:P40327
Length = 437
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 93/248 (37%), Positives = 141/248 (56%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYG PGTGKTL+AKAV
Sbjct: 177 PTESYSDIGGLESQIQEIKESVELPLTHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 236
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL + G EL+ KY+G R +F A AP +VF DE+D++ +R +
Sbjct: 237 ANQTSATFLRIVGSELIQKYLGDGPRLCRQIFKVAGENAPSIVFIDEIDAIGTKR-YDSN 295
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE- 371
S G + R + +LL ++DG DV ++ ATN+++ LDPA++RPGR+D+ + L+E
Sbjct: 296 SGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKI---LFEN 352
Query: 372 -DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR--RIIT 428
D ++ +L K LS+DV+L++LV +SGADI ++C+ A A+R R+
Sbjct: 353 PDLSTKKKILGIHTSKMNLSEDVNLETLVTT-KDDLSGADIQAMCTEAGLLALRERRMQV 411
Query: 429 SAPQVKSA 436
+A K A
Sbjct: 412 TAEDFKQA 419
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 376 (137.4 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 86/232 (37%), Positives = 135/232 (58%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P ++ DIGGL K E+ T G+K G++LYG PGTGKTL+AKAV
Sbjct: 180 PQETYADIGGLDNQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAV 239
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL V G EL+ KY+G + +R +F A AP +VF DE+D++ +R +
Sbjct: 240 ANQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKR-YDSN 298
Query: 315 SSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA++RPGR+D+ + L ++
Sbjct: 299 SGGEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDE 358
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ + + + + +++DVSLD L+ +SGADI +IC+ A A+R
Sbjct: 359 KTKRR-IFQIHTSRMTVAEDVSLDDLILA-KDDLSGADIKAICTEAGLMALR 408
>MGI|MGI:1917722 [details] [associations]
symbol:Atad2 "ATPase family, AAA domain containing 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001487 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS00674 PROSITE:PS50014 SMART:SM00297 SMART:SM00382
MGI:MGI:1917722 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0006200 GO:GO:0006351 GO:GO:0016887 eggNOG:COG0464
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 CTD:29028
HOVERGEN:HBG080873 ChiTaRS:ATAD2 EMBL:AK029867 EMBL:AK134319
IPI:IPI00135252 IPI:IPI00228860 RefSeq:NP_081711.2
UniGene:Mm.221758 ProteinModelPortal:Q8CDM1 SMR:Q8CDM1
IntAct:Q8CDM1 STRING:Q8CDM1 PhosphoSite:Q8CDM1 PRIDE:Q8CDM1
GeneID:70472 KEGG:mmu:70472 UCSC:uc007vtf.1 UCSC:uc007vtg.1
HOGENOM:HOG000034119 InParanoid:Q3UYW6 NextBio:331701
CleanEx:MM_ATAD2 Genevestigator:Q8CDM1
GermOnline:ENSMUSG00000022360 Uniprot:Q8CDM1
Length = 1040
Score = 387 (141.3 bits), Expect = 1.1e-34, P = 1.1e-34
Identities = 111/332 (33%), Positives = 174/332 (52%)
Query: 143 SSVTSGFERHDLTCLVRLSVKNKMLKQGINK---RDLQKEDFQQIYDDLQSRYSDQLDAP 199
S TS D C R + +N+ + IN+ + +K++ + IY D + D
Sbjct: 14 SDSTSSSSSED-DCFERRTKRNR--NRAINRCLPLNFRKDEIRGIYKDRMKIGASLADVD 70
Query: 200 SVP---NVSWEDIGGLSK----LKAEILSTFRGVNRTSGLKRS---GLLLYGPPGTGKTL 249
+ +V ++ +GGLS LK ++ K G L YGPPGTGKTL
Sbjct: 71 PMQLDTSVRFDSVGGLSSHIAALKEMVVFPLLYPEVFEKFKIQPPRGCLFYGPPGTGKTL 130
Query: 250 IAKAVATEC-----RMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDS 304
+A+A+A EC R+ F KG + L+K++G+SE +R +F +A P ++FFDE+D
Sbjct: 131 VARALANECSRGDKRVAFFMRKGADCLSKWVGESERQLRLLFDQAYQMRPAIIFFDEIDG 190
Query: 305 LAP-RRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDK 363
LAP R ++DQ + +VS LLA MDG+ + ++ ++GATNR+D +DPA+ RPGR D+
Sbjct: 191 LAPVRSSRQDQ---IHSSIVSTLLALMDGLDSRGEIVVIGATNRLDSIDPALRRPGRFDR 247
Query: 364 SLYVGLYEDRISQLGVLKAVVRKFKLSD-DVSLDSLVHHFPSQMSGADIYSICSNAWTRA 422
L D+ ++ +LK R + D+ L+ L H GADI SIC+ A A
Sbjct: 248 EFLFSL-PDKNARKEILKIHTRDWNPKPVDMFLEELAEHCVGYC-GADIKSICAEAALCA 305
Query: 423 IRR----IITSAP--QVKSAPVIVTMDDFLGA 448
+RR I T++ Q+ + + ++ DF A
Sbjct: 306 LRRRYPQIYTTSEKLQLDLSSITISAKDFEAA 337
>UNIPROTKB|E2QYF3 [details] [associations]
symbol:AFG3L2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060013 "righting reflex" evidence=IEA]
[GO:0042552 "myelination" evidence=IEA] [GO:0042407 "cristae
formation" evidence=IEA] [GO:0040014 "regulation of multicellular
organism growth" evidence=IEA] [GO:0034982 "mitochondrial protein
processing" evidence=IEA] [GO:0021675 "nerve development"
evidence=IEA] [GO:0016265 "death" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0007528 "neuromuscular
junction development" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005524 GO:GO:0005743
GO:GO:0007528 GO:GO:0008270 GO:GO:0006508 GO:GO:0040014
GO:GO:0004222 GO:GO:0042552 GO:GO:0007409 GO:GO:0030163
GeneTree:ENSGT00530000063070 KO:K08956 GO:GO:0017111 GO:GO:0042407
GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241 CTD:10939
OMA:LYRFVTT GO:GO:0016265 GO:GO:0021675 GO:GO:0060013
EMBL:AAEX03005521 RefSeq:XP_547682.2 ProteinModelPortal:E2QYF3
Ensembl:ENSCAFT00000029872 GeneID:490560 KEGG:cfa:490560
Uniprot:E2QYF3
Length = 806
Score = 384 (140.2 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 85/240 (35%), Positives = 132/240 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V ++D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 305 DVKFKDVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAILTGPPGTGKTLLAKATAG 364
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QS 315
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+ +
Sbjct: 365 EANVPFITVSGSEFLEMFVGVGPARVRDLFALARKNAPCILFIDEIDAVGRKRGRGNFGG 424
Query: 316 SGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++QLL EMDG +T+ +V IL TNR D+LDPA++RPGR D+ +++G D
Sbjct: 425 QSEQENTLNQLLVEMDGFNTTTNVVILAGTNRPDILDPALMRPGRFDRQIFIGP-PDIKG 483
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAPQ 432
+ + K +R KL + + L S SGAD+ ++C+ A A R + S Q
Sbjct: 484 RASIFKVHLRPLKLDSALEKEKLARKLASLTPGFSGADVANVCNEAALIAARHLSDSINQ 543
>TAIR|locus:2036099 [details] [associations]
symbol:RPT5B "26S proteasome AAA-ATPase subunit RPT5B"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=ISS] [GO:0010255 "glucose mediated signaling
pathway" evidence=IMP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0009553 "embryo sac
development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0006094 "gluconeogenesis" evidence=RCA] [GO:0006635 "fatty acid
beta-oxidation" evidence=RCA] [GO:0007010 "cytoskeleton
organization" evidence=RCA] [GO:0009407 "toxin catabolic process"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0009555
GO:GO:0000502 GO:GO:0017111 GO:GO:0009553 EMBL:AC000106
GO:GO:0010498 GO:GO:0010255 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03065 HOGENOM:HOG000225143 ProtClustDB:CLSN2679225
EMBL:EU980096 EMBL:AY050423 EMBL:AF412095 EMBL:AY124813
IPI:IPI00549144 PIR:C86223 RefSeq:NP_172384.1 UniGene:At.10379
UniGene:At.42241 ProteinModelPortal:O04019 SMR:O04019 IntAct:O04019
STRING:O04019 PaxDb:O04019 PRIDE:O04019 EnsemblPlants:AT1G09100.1
GeneID:837431 KEGG:ath:AT1G09100 GeneFarm:1498 TAIR:At1g09100
InParanoid:O04019 OMA:VEILEMS PhylomeDB:O04019
Genevestigator:O04019 Uniprot:O04019
Length = 423
Score = 375 (137.1 bits), Expect = 1.3e-34, P = 1.3e-34
Identities = 86/261 (32%), Positives = 143/261 (54%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILS------TFRGVNRT 229
+D I D L S Y ++ A V P + DIGGL K E++ T +
Sbjct: 139 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKEQFEK 198
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+LLYGPPGTGKTL+A+A A + FL + GP+L+ +IG + +R+ FL
Sbjct: 199 LGIRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLL 258
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ +PC++F DE+D++ +R + S + R + +LL ++DG + + ++ ATNR
Sbjct: 259 AKEKSPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDDRIKVIAATNR 318
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
D+LDPA++R GRLD+ + + ++ +L+ RK ++ DV+ + L +
Sbjct: 319 ADILDPALMRSGRLDRKIEFP-HPTEEARGRILQIHSRKMNVNADVNFEELARS-TDDFN 376
Query: 408 GADIYSICSNAWTRAIRRIIT 428
GA + ++C A A+RR T
Sbjct: 377 GAQLKAVCVEAGMLALRRDAT 397
>UNIPROTKB|E2QSC5 [details] [associations]
symbol:SPATA5L1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 Ensembl:ENSCAFT00000021792 Uniprot:E2QSC5
Length = 747
Score = 332 (121.9 bits), Expect = 6.5e-28, P = 6.5e-28
Identities = 80/213 (37%), Positives = 118/213 (55%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA-- 293
G+LL GPPG GKT + +AVA E LAV P L G++EEN+R VF +AR A
Sbjct: 226 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGARPGETEENVRRVFGRARELASR 285
Query: 294 -PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
P ++F DE+D+L PRRG ++ R V+Q+L +DG+ +DV ++ +TNR D LD
Sbjct: 286 GPTLLFLDEVDALCPRRGGAHRAPE--SRAVAQVLTLLDGIRGDRDVVVVASTNRPDALD 343
Query: 353 PAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIY 412
PA+ RPGR D+ + +G + + +L+ + K +S V L SL+ GAD+
Sbjct: 344 PALRRPGRFDREVVIGTPTLK-QRKAILQVITSKMPISSQVDL-SLLAEMTVGYVGADLT 401
Query: 413 SICSNAWTRAIRRIITSAPQVKSAPVIVTMDDF 445
++C A A+ ++ S K P I D F
Sbjct: 402 ALCREA---ALHALLHSEKN-KDNPAIDETDFF 430
Score = 288 (106.4 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 78/233 (33%), Positives = 121/233 (51%)
Query: 113 TEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQGIN 172
T +R+ ++Q + D SL L+ +T G+ DLT L R + + +L N
Sbjct: 362 TLKQRKAILQVITSKMPISSQVDLSL---LAEMTVGYVGADLTALCREAALHALLHSEKN 418
Query: 173 KRD--LQKEDFQQIYDDLQ-SRYSDQLDAPSVPNVSWEDIGGLS----KLKAEI---LST 222
K + + + DF + + +Q S + + + V WE IGGL KLK I L
Sbjct: 419 KDNPAIDETDFFEAFKKIQPSSFRSVIGLMDIKPVDWEQIGGLEDVKLKLKQSIEWPLKF 478
Query: 223 FRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENI 282
R R + G+LLYGPPG KT + +A+AT C +F++V G +L + ++G SE+ +
Sbjct: 479 PREFVRMGLTQPKGVLLYGPPGCAKTTLVRALATSCHCSFVSVSGADLFSPFVGDSEKVL 538
Query: 283 --RNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGV 333
+ VF +AR+ P +VF DE+DS+ R V +RV+S LL E+DGV
Sbjct: 539 SQQKVFRQARANTPAIVFLDEIDSILGSRSISKTECNVQERVLSVLLNELDGV 591
Score = 157 (60.3 bits), Expect = 1.6e-34, Sum P(2) = 1.6e-34
Identities = 36/99 (36%), Positives = 59/99 (59%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
+++V I+ ATNR D+LD A+LRPGRLDK +Y+ +++ +L +LK + + DVSL
Sbjct: 613 NRNVMIVAATNRPDVLDDALLRPGRLDKIIYIPPPDEK-GRLSILKVCTKNMPMGPDVSL 671
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQVK 434
+++ SGAD+ ++C A A++ A VK
Sbjct: 672 ENIAAE-TCFFSGADLGNLCKEAALLALQENGLEATTVK 709
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 87/235 (37%), Positives = 133/235 (56%)
Query: 202 PNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL E+ + + G+K G++LYG PGTGKTL+AKAV
Sbjct: 199 PTESYADIGGLESQIQEVRESVELPLLHPELYEEMGIKPPKGVILYGAPGTGKTLLAKAV 258
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A + FL + G EL+ KY+G +R +F A AP +VF DE+D++ +R D
Sbjct: 259 ANQTSATFLRIVGSELIQKYLGDGPRLVRQIFQVAAEHAPSIVFIDEIDAIGTKR--YDS 316
Query: 315 SSG---VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
+SG + R + +LL ++DG DV ++ ATN+++ LDPA++RPGR+D+ + L+E
Sbjct: 317 TSGGEREIQRTMLELLNQLDGFDDRGDVKVIMATNKIETLDPALIRPGRIDRKI---LFE 373
Query: 372 --DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
D+ ++ + K L DDV LD ++ +SGADI +IC+ A A+R
Sbjct: 374 NPDQNTKKKIFTLHTSKMSLGDDVDLDEFINQ-KDDLSGADIRAICTEAGLMALR 427
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 92/237 (38%), Positives = 137/237 (57%)
Query: 196 LDAPSVPNVSWEDIGGLS----KLK--AEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKT 248
+ A S +VS+ +IGGLS +L+ E+ + G+K G+LLYGPPGTGKT
Sbjct: 126 MTAESPGSVSYGEIGGLSNQIRELREVVELPLMIPELFIRVGIKAPKGVLLYGPPGTGKT 185
Query: 249 LIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPR 308
L+A+A+A+ NFL V +++KYIG+S IR +F AR PCV+F DE+D++ R
Sbjct: 186 LLARAIASNLEANFLKVVSSAIVDKYIGESARVIREMFGYARDHQPCVIFMDEIDAIGGR 245
Query: 309 RGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYV 367
R E S+ + R + +LL +MDG T V I+ ATNR D+LDPA+LRPGRLD+ + +
Sbjct: 246 RFSEGTSADREIQRTLMELLNQMDGFDTLSKVKIIMATNRPDVLDPALLRPGRLDRKIEI 305
Query: 368 GLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
L + ++ VLK DV +++ + AD+ ++C+ A AIR
Sbjct: 306 PL-PNEAGRVDVLKIHAANITKHGDVDYEAIAK-LADGFNAADLRNVCTEAGMFAIR 360
>SGD|S000005643 [details] [associations]
symbol:RPT5 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000005643 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006948 GO:GO:0006511 GO:GO:0017111 EMBL:X90518 EMBL:X94335
GO:GO:0045899 GeneTree:ENSGT00560000077230 GO:GO:0070682
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
GO:GO:0008540 PDB:4B4T PDBsum:4B4T OMA:GALMYGP OrthoDB:EOG40VZZ2
EMBL:X73569 EMBL:Z75025 PIR:S46605 RefSeq:NP_014760.3
RefSeq:NP_014762.3 ProteinModelPortal:P33297 SMR:P33297
DIP:DIP-1590N IntAct:P33297 MINT:MINT-383887 STRING:P33297
PaxDb:P33297 PeptideAtlas:P33297 EnsemblFungi:YOR117W GeneID:854284
GeneID:854286 KEGG:sce:YOR117W KEGG:sce:YOR119C KO:K07178
NextBio:976260 Genevestigator:P33297 GermOnline:YOR117W
Uniprot:P33297
Length = 434
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 105/343 (30%), Positives = 174/343 (50%)
Query: 97 KQIQKLFLKTINVLPLTEPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTC 156
+Q+ L + V+ + E E + + GG+ D + V + V + +
Sbjct: 73 RQLPYLVANVVEVMDMNEIEDKE--NSESTTQGGNVNLDNTAVGKAAVVKTSSRQTVFLP 130
Query: 157 LVRLSVKNKMLKQ---GINKRDLQKEDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIG 210
+V L +K+ G+NK D I D L S + ++ A V P ++ D+G
Sbjct: 131 MVGLVDPDKLKPNDLVGVNK------DSYLILDTLPSEFDSRVKAMEVDEKPTETYSDVG 184
Query: 211 GLSK-----LKAEILSTFRGVN-RTSGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFL 263
GL K ++A +L R + G++ G L+YGPPGTGKTL+A+A A + FL
Sbjct: 185 GLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLARACAAQTNATFL 244
Query: 264 AVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRV 322
+ P+L+ YIG+ + +R+ F A+ AP ++F DELD++ +R ++S + R
Sbjct: 245 KLAAPQLVQMYIGEGAKLVRDAFALAKEKAPTIIFIDELDAIGTKRFDSEKSGDREVQRT 304
Query: 323 VSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL-YEDRISQLGVLK 381
+ +LL ++DG + V +L ATNRVD+LDPA+LR GRLD+ + L ED +Q +L+
Sbjct: 305 MLELLNQLDGFSSDDRVKVLAATNRVDVLDPALLRSGRLDRKIEFPLPSEDSRAQ--ILQ 362
Query: 382 AVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
RK DD++ L + +GA + ++ A A+R
Sbjct: 363 IHSRKMTTDDDINWQELARS-TDEFNGAQLKAVTVEAGMIALR 404
>TAIR|locus:2079742 [details] [associations]
symbol:RPT5A "regulatory particle triple-A ATPase 5A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IDA;TAS] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0005516 "calmodulin binding" evidence=TAS] [GO:0009553 "embryo
sac development" evidence=IGI] [GO:0009555 "pollen development"
evidence=IGI] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGI;RCA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009560 "embryo sac egg cell
differentiation" evidence=RCA] [GO:0009630 "gravitropism"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0009555 GO:GO:0000502
GO:GO:0017111 GO:GO:0009553 GO:GO:0010498 EMBL:AC009606
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP EMBL:AF081573 EMBL:AF123394 EMBL:AY062705 EMBL:BT000140
IPI:IPI00517001 RefSeq:NP_187204.1 UniGene:At.11513 HSSP:Q9LCZ4
ProteinModelPortal:Q9SEI2 SMR:Q9SEI2 IntAct:Q9SEI2 STRING:Q9SEI2
PaxDb:Q9SEI2 PRIDE:Q9SEI2 EnsemblPlants:AT3G05530.1 GeneID:819718
KEGG:ath:AT3G05530 GeneFarm:2742 TAIR:At3g05530 InParanoid:Q9SEI2
PhylomeDB:Q9SEI2 ProtClustDB:CLSN2679225 Uniprot:Q9SEI2
Length = 424
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 86/261 (32%), Positives = 142/261 (54%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILS------TFRGVNRT 229
+D I D L S Y ++ A V P + DIGGL K E++ T +
Sbjct: 140 KDSYLILDTLPSEYDSRVKAMEVDEKPTEDYNDIGGLEKQIQELVEAIVLPMTHKERFEK 199
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+LLYGPPGTGKTL+A+A A + FL + GP+L+ +IG + +R+ F
Sbjct: 200 LGVRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQL 259
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ APC++F DE+D++ +R + S + R + +LL ++DG + + + ++ ATNR
Sbjct: 260 AKEKAPCIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLDGFSSDERIKVIAATNR 319
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
D+LDPA++R GRLD+ + + ++ +L+ RK + DV+ + L +
Sbjct: 320 ADILDPALMRSGRLDRKIEFP-HPTEEARARILQIHSRKMNVHPDVNFEELARS-TDDFN 377
Query: 408 GADIYSICSNAWTRAIRRIIT 428
GA + ++C A A+RR T
Sbjct: 378 GAQLKAVCVEAGMLALRRDAT 398
>WB|WBGene00018991 [details] [associations]
symbol:F56F11.4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0000003 "reproduction" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0009792 GO:GO:0005737 GO:GO:0040007 GO:GO:0002119
GO:GO:0040011 GO:GO:0040017 GO:GO:0040035 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
EMBL:FO081497 RefSeq:NP_741098.1 ProteinModelPortal:Q8MXF1
SMR:Q8MXF1 STRING:Q8MXF1 PaxDb:Q8MXF1 PRIDE:Q8MXF1
EnsemblMetazoa:F56F11.4b GeneID:175403 KEGG:cel:CELE_F56F11.4
UCSC:F56F11.4b CTD:175403 WormBase:F56F11.4b InParanoid:Q8MXF1
OMA:TITISEN NextBio:888008 ArrayExpress:Q8MXF1 Uniprot:Q8MXF1
Length = 432
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 87/235 (37%), Positives = 137/235 (58%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 169 VPDSTYEMVGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARA 228
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRR-- 309
VA TEC F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 229 VAHHTEC--TFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVE 286
Query: 310 GQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
G S V R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 287 GSRGGDSEVQ-RTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPA 345
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ ++ +LK RK L + +D + P SGA++ S+C+ A A+R
Sbjct: 346 PDEK-ARAQILKIHSRKMNLMRGIRMDKIAEQIPGA-SGAEVKSVCTEAGMFALR 398
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 381 (139.2 bits), Expect = 2.2e-34, P = 2.2e-34
Identities = 120/342 (35%), Positives = 174/342 (50%)
Query: 114 EPERRLLIQYQLDCLGGDYGFDASLVEYLSSVTSGFERHDLTCLVRLSVKNKMLKQG-IN 172
E ++R+ + + L G Y + LV+ LS V + ++ C++ V + + G I
Sbjct: 108 EHKKRVSERSLQELLDGIYVHEGHLVD-LSGVKA-----EIRCVLVEKVNSGSQRAGLIT 161
Query: 173 KRDLQKEDFQQIYDDLQSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFR--GVNRTS 230
R Q L R Q+ A P ED+ + LK I R G R
Sbjct: 162 ARTCVDISTIQTVKHLD-RQQQQVSA--APLGGMEDV--FASLKEMITFPLRYPGSLRQL 216
Query: 231 GLK-RSGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKA 289
GL GLLL GPPG GKTL+ + VA + + V GPE+ G+SEEN+R VF +A
Sbjct: 217 GLSCPRGLLLIGPPGVGKTLLVRCVAKDIGATLVTVNGPEVTGSRPGESEENLRRVFEQA 276
Query: 290 RSAA---PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATN 346
R AA PCV+ DE+DSL PRR SS +R+V+QLL MD + + + I+GATN
Sbjct: 277 RDAADDGPCVLLIDEIDSLCPRR--TGSSSAPENRLVAQLLTLMDAIGSHEGFVIIGATN 334
Query: 347 RVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQM 406
+ D LDPA+ RPGR D+ + +G+ + + +LK V R+ LS DV L++L +
Sbjct: 335 QPDSLDPALRRPGRFDREVIIGV-PSLLQRRSILKCVCREMPLSPDVDLNTLAEMTCGYV 393
Query: 407 SGADIYSICSNAWTRAIRRIITSAPQVKSAPVIVTMDDFLGA 448
GAD+ ++ A +A+R A S PV +M F+ A
Sbjct: 394 -GADLSALSREAALQAMRHSQMGA----SEPV--SMQHFMQA 428
Score = 269 (99.8 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 67/202 (33%), Positives = 103/202 (50%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD-LQKEDFQQIYDDLQ-SRYSDQLDAP 199
L+ +T G+ DL+ L R + M + + + + F Q +Q S + A
Sbjct: 385 LAEMTCGYVGADLSALSREAALQAMRHSQMGASEPVSMQHFMQALRHVQPSCLRSSIGAT 444
Query: 200 SVPNVSWEDIGGLSKLKAEILSTFRGVNRTS------GLKRS-GLLLYGPPGTGKTLIAK 252
+ WE IGGL +K ++ + R G+ R G+LLYGPPG KT + K
Sbjct: 445 DFKPIGWEQIGGLEDVKLKLKQSIEWPMRFPEAFVRLGVSRPRGVLLYGPPGCAKTTLVK 504
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
A A+ +F ++ G EL + Y+G SE+ + +F +AR+ AP +VF DE+DS+ R
Sbjct: 505 AAASSSHCSFFSLSGAELFSPYVGDSEKTLAQLFAQARACAPSIVFLDEVDSMVGSREDG 564
Query: 313 DQSS-GVMDRVVSQLLAEMDGV 333
SS V +V+S LL E+DGV
Sbjct: 565 SSSSHSVQSQVLSVLLTELDGV 586
Score = 149 (57.5 bits), Expect = 2.2e-31, Sum P(2) = 2.2e-31
Identities = 36/89 (40%), Positives = 52/89 (58%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
++DV I+ ATNR + LD A+LRPGRLD+ +YV D ++L VL+ + L DV L
Sbjct: 623 NKDVLIVAATNRPEALDSALLRPGRLDQIIYVPP-PDLQARLAVLRICTKSVPLHQDVCL 681
Query: 396 DSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ L SGAD+ ++C A A+R
Sbjct: 682 EDLAAQ-TELFSGADLENLCKEAALLALR 709
>UNIPROTKB|Q3AFJ8 [details] [associations]
symbol:ftsH "ATP-dependent zinc metalloprotease FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434 Pfam:PF06480
PROSITE:PS00674 SMART:SM00382 GO:GO:0016021 GO:GO:0005886
GO:GO:0005524 GO:GO:0046872 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0016887
GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465 TIGRFAMs:TIGR01241
HOGENOM:HOG000217276 KO:K03798 RefSeq:YP_359086.1
ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8 STRING:Q3AFJ8 MEROPS:M41.021
GeneID:3726212 KEGG:chy:CHY_0214 PATRIC:21273609 OMA:TGKADDE
BioCyc:CHYD246194:GJCN-215-MONOMER Uniprot:Q3AFJ8
Length = 619
Score = 376 (137.4 bits), Expect = 3.5e-34, P = 3.5e-34
Identities = 82/229 (35%), Positives = 133/229 (58%)
Query: 204 VSWEDIGGLSKLKAEI------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATE 257
V++ D+ G+ ++K E+ L R N G+LL+G PGTGKTL+A+A+A E
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 258 CRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE-DQSS 316
+ F ++ G + + ++G +R++F +A+ APC+VF DE+D++ +RG
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGH 274
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
++ ++QLL EMDG ++++ + I+ ATNR D+LDPA+LRPGR D+ + V D +
Sbjct: 275 DEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT-PDINGR 333
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+LK V+ L DDV LD L P +GAD+ ++ + A A RR
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTPG-FTGADLANMVNEAALLAARR 381
>TIGR_CMR|CHY_0214 [details] [associations]
symbol:CHY_0214 "cell division protein FtsH"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004222
"metalloendopeptidase activity" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 GO:GO:0016021
GO:GO:0005886 GO:GO:0005524 GO:GO:0046872 EMBL:CP000141
GenomeReviews:CP000141_GR GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0016887 GO:GO:0000910 GO:GO:0030163 eggNOG:COG0465
TIGRFAMs:TIGR01241 HOGENOM:HOG000217276 KO:K03798
RefSeq:YP_359086.1 ProteinModelPortal:Q3AFJ8 SMR:Q3AFJ8
STRING:Q3AFJ8 MEROPS:M41.021 GeneID:3726212 KEGG:chy:CHY_0214
PATRIC:21273609 OMA:TGKADDE BioCyc:CHYD246194:GJCN-215-MONOMER
Uniprot:Q3AFJ8
Length = 619
Score = 376 (137.4 bits), Expect = 3.5e-34, P = 3.5e-34
Identities = 82/229 (35%), Positives = 133/229 (58%)
Query: 204 VSWEDIGGLSKLKAEI------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAKAVATE 257
V++ D+ G+ ++K E+ L R N G+LL+G PGTGKTL+A+A+A E
Sbjct: 155 VTFADVAGIDEVKEELAEIVEFLKNPRKYNELGARIPKGVLLFGQPGTGKTLLARAIAGE 214
Query: 258 CRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE-DQSS 316
+ F ++ G + + ++G +R++F +A+ APC+VF DE+D++ +RG
Sbjct: 215 AGVPFFSISGSDFVEMFVGVGASRVRDLFEQAKKNAPCIVFIDEIDAVGRQRGAGLGGGH 274
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
++ ++QLL EMDG ++++ + I+ ATNR D+LDPA+LRPGR D+ + V D +
Sbjct: 275 DEREQTLNQLLVEMDGFNSNEGIIIIAATNRPDILDPALLRPGRFDRHIVVDT-PDINGR 333
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRR 425
+LK V+ L DDV LD L P +GAD+ ++ + A A RR
Sbjct: 334 KEILKVHVKGKPLGDDVDLDVLARRTPG-FTGADLANMVNEAALLAARR 381
>UNIPROTKB|P46470 [details] [associations]
symbol:psmc5 "26S protease regulatory subunit 8"
species:8355 "Xenopus laevis" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 KO:K03066 CTD:5705 EMBL:X81986 RefSeq:NP_001081635.1
UniGene:Xl.45 ProteinModelPortal:P46470 PRIDE:P46470 GeneID:397968
KEGG:xla:397968 Uniprot:P46470
Length = 461
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 83/231 (35%), Positives = 132/231 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 138 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPEHFEALGIAQPKGVLLYGPPGTGKTLLARA 197
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 198 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSRLEGGS 257
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ + +
Sbjct: 258 GGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPNEE 317
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 318 -ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 366
>SGD|S000000284 [details] [associations]
symbol:SEC18 "ATPase required for vesicular transport between
ER and Golgi" species:4932 "Saccharomyces cerevisiae" [GO:0048280
"vesicle fusion with Golgi apparatus" evidence=IDA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IDA] [GO:0048219
"inter-Golgi cisterna vesicle-mediated transport" evidence=IMP]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IMP] [GO:0048211 "Golgi vesicle docking" evidence=IDA]
[GO:0035494 "SNARE complex disassembly" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000000284 Pfam:PF02359
GO:GO:0005524 GO:GO:0005737 GO:GO:0043332 GO:GO:0000045
EMBL:BK006936 GO:GO:0016887 KO:K09448 eggNOG:COG0464
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 EMBL:X76294
GO:GO:0043001 GO:GO:0048280 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 EMBL:AF004912
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 GO:GO:0048219 GO:GO:0035494 OrthoDB:EOG4PVS6W
EMBL:M20662 EMBL:Z35949 PIR:S45477 RefSeq:NP_009636.3
RefSeq:NP_009639.3 PDB:1CR5 PDBsum:1CR5 ProteinModelPortal:P18759
SMR:P18759 DIP:DIP-2497N IntAct:P18759 MINT:MINT-707733
STRING:P18759 PaxDb:P18759 PRIDE:P18759 EnsemblFungi:YBR080C
GeneID:852372 GeneID:852377 KEGG:sce:YBR080C KEGG:sce:YBR083W
CYGD:YBR080c EvolutionaryTrace:P18759 NextBio:971158
Genevestigator:P18759 GermOnline:YBR080C GO:GO:0048211
Uniprot:P18759
Length = 758
Score = 379 (138.5 bits), Expect = 3.7e-34, P = 3.7e-34
Identities = 93/237 (39%), Positives = 138/237 (58%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNF-LAVKGPELLNKYIGQSEENIRNVF-------- 286
GLLLYGPPGTGKTLIA+ + T V GPE+L+KY+G SEENIRN+F
Sbjct: 276 GLLLYGPPGTGKTLIARKIGTMLNAKEPKIVNGPEILSKYVGSSEENIRNLFKDAEAEYR 335
Query: 287 LKARSAAPCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATN 346
K ++ ++ FDELDS+ +RG +GV D VV+QLLA+MDGV ++ ++G TN
Sbjct: 336 AKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGDNVVNQLLAKMDGVDQLNNILVIGMTN 395
Query: 347 RVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFK----LSDDVSLDSLVHHF 402
R DL+D A+LRPGR + + + L +++ +L + +K + +SDDV+L L
Sbjct: 396 RKDLIDSALLRPGRFEVQVEIHLPDEK-GRLQIFDIQTKKMRENNMMSDDVNLAELAA-L 453
Query: 403 PSQMSGADIYSICSNAWTRAIRRIIT---SAPQVKS---APVIVTMDDFLGACSLAT 453
SGA+I + +A + AI + + A ++ + A + VT +DFL A + T
Sbjct: 454 TKNFSGAEIEGLVKSASSFAINKTVNIGKGATKLNTKDIAKLKVTREDFLNALNDVT 510
>RGD|1595990 [details] [associations]
symbol:Spata5l1 "spermatogenesis associated 5-like 1"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1595990 GO:GO:0005524 GeneTree:ENSGT00700000104502
GO:GO:0017111 EMBL:CH473949 CTD:79029 OrthoDB:EOG42RD70
IPI:IPI00357915 RefSeq:NP_001103117.1 UniGene:Rn.151898
Ensembl:ENSRNOT00000043414 GeneID:691729 KEGG:rno:691729
UCSC:RGD:1595990 NextBio:743659 Uniprot:D4A2B7
Length = 747
Score = 338 (124.0 bits), Expect = 6.8e-29, P = 6.8e-29
Identities = 78/193 (40%), Positives = 115/193 (59%)
Query: 236 GLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAA-- 293
G+LL GPPG GKT + +AVA E LAV P L G++EEN+R VF +A+ A
Sbjct: 229 GVLLAGPPGVGKTQLVRAVAREAGAELLAVSAPALQGTRPGETEENVRRVFQRAQELASR 288
Query: 294 -PCVVFFDELDSLAPRRGQEDQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLD 352
P ++F DE+D+L PRRG ++ RVV+Q+L +DG+H ++V ++GATNR D LD
Sbjct: 289 GPSLLFLDEVDALCPRRGGPQRAPE--SRVVAQVLTLLDGIHGDREVVVVGATNRPDELD 346
Query: 353 PAILRPGRLDKSLYVGL--YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGAD 410
PA+ RPGR D+ + +G + R + LGV+ + K +S + L L + GAD
Sbjct: 347 PALRRPGRFDREVIIGTPTLKQREAILGVITS---KMPISSHIDLGLLAEMTVGYV-GAD 402
Query: 411 IYSICSNAWTRAI 423
+ ++C A T A+
Sbjct: 403 LTALCREAATCAL 415
Score = 289 (106.8 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 69/202 (34%), Positives = 109/202 (53%)
Query: 142 LSSVTSGFERHDLTCLVRLSVKNKMLKQGINKRD--LQKEDFQQIYDDLQ-SRYSDQLDA 198
L+ +T G+ DLT L R + +LK N+ + +++ DF + + +Q S + +
Sbjct: 391 LAEMTVGYVGADLTALCREAATCALLKNEKNQNNPKIEETDFLEAFKKVQPSSFRSSIGL 450
Query: 199 PSVPNVSWEDIGGLSKLKAEILST------FRGVNRTSGLKR-SGLLLYGPPGTGKTLIA 251
+ V WE IGGL +K ++ F GL + GLLLYGPPG KT +
Sbjct: 451 TDIRPVGWEQIGGLEDVKLKLKQCVEWPLKFPQEFARMGLTQPKGLLLYGPPGCAKTTLV 510
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
+A+AT C +F++V G +L + ++G SE+ + VF +AR+ P +VF DE+DS+ R
Sbjct: 511 RALATSCHCSFVSVCGADLFSPFVGDSEKVLSQVFRQARANTPALVFLDEIDSVLGSRSV 570
Query: 312 EDQSSGVMDRVVSQLLAEMDGV 333
+RV+S LL E+DGV
Sbjct: 571 GSSGCDARERVLSVLLNELDGV 592
Score = 152 (58.6 bits), Expect = 4.0e-34, Sum P(2) = 4.0e-34
Identities = 36/83 (43%), Positives = 50/83 (60%)
Query: 336 SQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSL 395
S+ V I+ ATNR D+LD A+LRPGRLDK +YV DR +L +LK + +VSL
Sbjct: 614 SRSVMIVVATNRPDVLDDALLRPGRLDKMVYVPP-PDREGRLSILKVCTNNMPIGLNVSL 672
Query: 396 DSLVHHFPSQMSGADIYSICSNA 418
++L SGAD+ ++C A
Sbjct: 673 ENLAAE-TCYFSGADLRNLCKEA 694
>MGI|MGI:1928277 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004222 "metalloendopeptidase activity"
evidence=ISA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0007005 "mitochondrion organization"
evidence=IGI] [GO:0008053 "mitochondrial fusion" evidence=IGI]
[GO:0008152 "metabolic process" evidence=ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0008237 "metallopeptidase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0034982 "mitochondrial protein processing"
evidence=IGI] [GO:0042407 "cristae formation" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1928277
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0031966
GO:GO:0046872 GO:GO:0008270 GO:GO:0006508 GO:GO:0004222
GO:GO:0030163 EMBL:AK012394 EMBL:AK159647 EMBL:AK167964
EMBL:AK168244 EMBL:BC056978 EMBL:AF329695 IPI:IPI00468514
IPI:IPI00652659 RefSeq:NP_473411.2 UniGene:Mm.287475
ProteinModelPortal:Q920A7 SMR:Q920A7 IntAct:Q920A7 STRING:Q920A7
MEROPS:M41.016 PhosphoSite:Q920A7 PaxDb:Q920A7 PRIDE:Q920A7
Ensembl:ENSMUST00000001520 Ensembl:ENSMUST00000098320 GeneID:114896
KEGG:mmu:114896 UCSC:uc009nwd.2 CTD:114896 eggNOG:COG0465
GeneTree:ENSGT00530000063070 HOGENOM:HOG000217277
HOVERGEN:HBG050184 InParanoid:Q920A7 KO:K08956 OMA:WDEKDFR
OrthoDB:EOG4SBDXC NextBio:368917 Bgee:Q920A7 CleanEx:MM_AFG3L1
Genevestigator:Q920A7 GermOnline:ENSMUSG00000031967 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
Uniprot:Q920A7
Length = 789
Score = 379 (138.5 bits), Expect = 4.2e-34, P = 4.2e-34
Identities = 84/240 (35%), Positives = 131/240 (54%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V + D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 296 DVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAG 355
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E + F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+
Sbjct: 356 EANVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGG 415
Query: 317 -GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++Q+L EMDG ++S +V +L TNR D+LDPA+ RPGR D+ +Y+G D
Sbjct: 416 QSEQENTLNQMLVEMDGFNSSTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGP-PDIKG 474
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAPQ 432
+ + K +R KL +S D+L + +GADI ++C+ A A R + S +
Sbjct: 475 RSSIFKVHLRPLKLDGSLSKDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQE 534
>GENEDB_PFALCIPARUM|PFL1925w [details] [associations]
symbol:PFL1925w "cell division protein FtsH,
putative" species:5833 "Plasmodium falciparum" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 380 (138.8 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 86/238 (36%), Positives = 137/238 (57%)
Query: 198 APSVPNVSWEDIGGLSKLKAEILSTFRGV-NRTS----GLKR-SGLLLYGPPGTGKTLIA 251
+P + +E+I G+ + K E+L + NR G + G+LL GPPG+GKT++A
Sbjct: 140 SPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLA 199
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
+AVATE + ++ GPE + Y+GQ + IR +F ARS AP +VF DE+D++ +R
Sbjct: 200 RAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSS 259
Query: 312 ED-QSSGVM--DRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
+G D+ ++QLL EMDG + + ++GATNR+D LD A+LRPGR D+ +YV
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVP 319
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSL--VHHFPSQMSGADIYSICSNAWTRAIR 424
L D + +L+ ++K K D+ L+ + + SGAD+ ++ + A A R
Sbjct: 320 L-PDINGRKKILEIYIKKIK--SDLKLEDIEKIARLTPGFSGADLENVVNEATILATR 374
>UNIPROTKB|Q8I526 [details] [associations]
symbol:PFL1925w "Cell division protein FtsH, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0051301
GO:GO:0016020 GO:GO:0006508 GO:GO:0004222 EMBL:AE014188
GO:GO:0030163 TIGRFAMs:TIGR01241 GO:GO:0004176 HOGENOM:HOG000217276
HSSP:Q9LCZ4 KO:K01417 RefSeq:XP_001350791.1
ProteinModelPortal:Q8I526 SMR:Q8I526 IntAct:Q8I526
MINT:MINT-1702870 PRIDE:Q8I526 EnsemblProtists:PFL1925w:mRNA
GeneID:811437 KEGG:pfa:PFL1925w EuPathDB:PlasmoDB:PF3D7_1239700
ProtClustDB:CLSZ2433071 Uniprot:Q8I526
Length = 880
Score = 380 (138.8 bits), Expect = 4.3e-34, P = 4.3e-34
Identities = 86/238 (36%), Positives = 137/238 (57%)
Query: 198 APSVPNVSWEDIGGLSKLKAEILSTFRGV-NRTS----GLKR-SGLLLYGPPGTGKTLIA 251
+P + +E+I G+ + K E+L + NR G + G+LL GPPG+GKT++A
Sbjct: 140 SPHFKPIRFEEIAGIDESKLELLEVVDFIKNREKYHEMGARMPKGVLLVGPPGSGKTMLA 199
Query: 252 KAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
+AVATE + ++ GPE + Y+GQ + IR +F ARS AP +VF DE+D++ +R
Sbjct: 200 RAVATEANVPYIYTSGPEFIEIYVGQGAKRIRQLFAHARSVAPSIVFIDEIDAIGGKRSS 259
Query: 312 ED-QSSGVM--DRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVG 368
+G D+ ++QLL EMDG + + ++GATNR+D LD A+LRPGR D+ +YV
Sbjct: 260 GSVNGAGQREHDQTLNQLLVEMDGFSNTVHIMVIGATNRIDTLDSALLRPGRFDRIVYVP 319
Query: 369 LYEDRISQLGVLKAVVRKFKLSDDVSLDSL--VHHFPSQMSGADIYSICSNAWTRAIR 424
L D + +L+ ++K K D+ L+ + + SGAD+ ++ + A A R
Sbjct: 320 L-PDINGRKKILEIYIKKIK--SDLKLEDIEKIARLTPGFSGADLENVVNEATILATR 374
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 149 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 208
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 209 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 267
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 268 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 327
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 328 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 378
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 269
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 270 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 329
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 330 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 380
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 151 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 210
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 211 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 269
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 270 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 329
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 330 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 380
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 83/235 (35%), Positives = 137/235 (58%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
+P+ ++E +GGL K EI + + G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 139 IPDSTYEMVGGLEKQIKEIKEVIELPVKHPELFESLGIPQPKGILLYGPPGTGKTLLARA 198
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
VA T+C+ F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 199 VAHHTDCK--FIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRSD 256
Query: 312 EDQSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
SG + R + +LL ++DG ++++ ++ ATNR+D+LDPA+LRPGR+D+ +
Sbjct: 257 SSGGSGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPP 316
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ +L+ R L+ + L S+ + SGA++ +C+ A A+R
Sbjct: 317 PSAE-ARAEILRIHSRSMNLTRGIDLKSIAEKM-NGASGAELKGVCTEAGMFALR 369
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/235 (36%), Positives = 140/235 (59%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ +++ +GGL+K EI + + G+ + G++LYGPPGTGKTL+A+A
Sbjct: 142 VPDSTYDMVGGLTKQIKEIKEVIELPVKHPELFESLGIAQPKGVILYGPPGTGKTLLARA 201
Query: 254 VA--TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQ 311
VA T+C+ F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ R
Sbjct: 202 VAHHTDCK--FIRVSGAELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSTR-V 258
Query: 312 EDQSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGL 369
E G + R + +LL ++DG TS+++ I+ ATNR+D+LDPA+LRPGR+D+ +
Sbjct: 259 EGSGGGDSEVQRTMLELLNQLDGFETSKNIKIIMATNRLDILDPALLRPGRIDRKIEFPP 318
Query: 370 YEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
++ +L+ RK L+ ++L + + SGAD+ +C+ A A+R
Sbjct: 319 -PSVAARAEILRIHSRKMNLTRGINLRKVAEKM-NGCSGADVKGVCTEAGMYALR 371
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 86/233 (36%), Positives = 135/233 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR-GVNRTS-----GLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E IGGL K EI V G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 143 VPDSTYEMIGGLDKQIKEIKEVIELPVKHPELFEALGIAQPKGVLLYGPPGTGKTLLARA 202
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ K+IG+ +R +F+ AR AP ++F DE+DS+ R E
Sbjct: 203 VAHHTDCTFIRVSGSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSR-LEG 261
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYE 371
S G + R + +LL ++DG ++++ ++ ATNR+D+LD A+LRPGR+D+ +
Sbjct: 262 GSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPPPN 321
Query: 372 DRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+ ++L +LK RK L+ ++L + P SGA++ +C+ A A+R
Sbjct: 322 EE-ARLDILKIHSRKMNLTRGINLRKIAELMPGA-SGAEVKGVCTEAGMYALR 372
>RGD|1309722 [details] [associations]
symbol:Afg3l1 "AFG3(ATPase family gene 3)-like 1 (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0004222
"metalloendopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=ISO]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0007005 "mitochondrion
organization" evidence=ISO] [GO:0008053 "mitochondrial fusion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016021 "integral to membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=ISO] [GO:0042407
"cristae formation" evidence=ISO] HAMAP:MF_01458 InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 InterPro:IPR011546 Pfam:PF00004 Pfam:PF01434
Pfam:PF06480 PROSITE:PS00674 SMART:SM00382 RGD:1309722
GO:GO:0016021 GO:GO:0005739 GO:GO:0005524 GO:GO:0008270
GO:GO:0006508 GO:GO:0004222 GO:GO:0030163 GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
IPI:IPI00365343 Ensembl:ENSRNOT00000065957 UCSC:RGD:1309722
ArrayExpress:F1LS61 Uniprot:F1LS61
Length = 761
Score = 378 (138.1 bits), Expect = 4.8e-34, P = 4.8e-34
Identities = 82/240 (34%), Positives = 133/240 (55%)
Query: 203 NVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVAT 256
+V + D+ G + K EI+ + G K G +L GPPGTGKTL+AKA A
Sbjct: 268 DVRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGAMLTGPPGTGKTLLAKATAG 327
Query: 257 ECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQSS 316
E ++ F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+
Sbjct: 328 EAKVPFITVNGSEFLEMFVGVGPARVRDMFAMARKHAPCILFIDEIDAIGRKRGRGHLGG 387
Query: 317 -GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRIS 375
+ ++Q+L EMDG +++ +V +L TNR D+LDPA+ RPGR D+ +Y+G D
Sbjct: 388 QSEQENTLNQMLVEMDGFNSTTNVVVLAGTNRPDILDPALTRPGRFDRQIYIGP-PDIKG 446
Query: 376 QLGVLKAVVRKFKLSDDVSLDSLVHHFPSQ---MSGADIYSICSNAWTRAIRRIITSAPQ 432
+ + K +R KL + ++ D+L + +GADI ++C+ A A R + S +
Sbjct: 447 RSSIFKVHLRPLKLDESLTRDALSRKLAALTPGFTGADISNVCNEAALIAARHLSPSVQE 506
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 84/230 (36%), Positives = 132/230 (57%)
Query: 203 NVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKAVA 255
NV++ +IGGL + E+ + G+ G LLYGPPGTGKTL+A+A+A
Sbjct: 138 NVNYAEIGGLGQQIRELREVIELPLLNPDIFLRVGISPPKGCLLYGPPGTGKTLLARAIA 197
Query: 256 TECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQS 315
++ NFL V +++KYIG+S IR +F AR PC++F DE+D++ RR E S
Sbjct: 198 SQMDANFLKVVSSAIVDKYIGESARLIREMFAYARDHQPCIIFMDEIDAIGGRRFSEGTS 257
Query: 316 SG-VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRI 374
+ + R + +LL +MDG V ++ ATNR D LDPA+LRPGRLD+ L + L + +
Sbjct: 258 ADREIQRTLMELLNQMDGFDALGQVKMIMATNRPDTLDPALLRPGRLDRKLEIPL-PNEV 316
Query: 375 SQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ +LK ++ +++V +GAD+ +IC+ A A+R
Sbjct: 317 ARMDILKIHAEPLNKRGEIDYEAVVK-LSDLFNGADLRNICTEAGLFALR 365
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 93/246 (37%), Positives = 139/246 (56%)
Query: 202 PNVSWEDIGGLS------KLKAEILSTFRGVNRTSGLKR-SGLLLYGPPGTGKTLIAKAV 254
P S+ DIGGL K E+ T + G+K G++LYG PGTGKTL+AKAV
Sbjct: 183 PLESYADIGGLEAQIQEIKEAVELPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAV 242
Query: 255 ATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQEDQ 314
A FL V G EL+ KY+G + +R +F A +P +VF DE+D++ +R +
Sbjct: 243 ANSTSATFLRVVGSELIQKYLGDGPKLVRELFRVADDLSPSIVFIDEIDAVGTKR-YDAH 301
Query: 315 SSGVMD--RVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
S G + R + +LL ++DG + DV ++ ATNR++ LDPA+LRPGR+D+ + L D
Sbjct: 302 SGGEREIQRTMLELLNQLDGFDSRGDVKVILATNRIESLDPALLRPGRIDRKIEFPL-PD 360
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR--RIITSA 430
++ + + K LS+DV+L+ V + SGADI +IC+ A A+R R+ +
Sbjct: 361 IKTRRRIFQIHTSKMTLSEDVNLEEFVMT-KDEFSGADIKAICTEAGLLALRERRMKVTH 419
Query: 431 PQVKSA 436
P K A
Sbjct: 420 PDFKKA 425
>TAIR|locus:2052806 [details] [associations]
symbol:VAR2 "VARIEGATED 2" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0008237 "metallopeptidase activity"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA;ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=ISS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0010027
"thylakoid membrane organization" evidence=RCA;IMP] [GO:0009507
"chloroplast" evidence=IDA] [GO:0010205 "photoinhibition"
evidence=IMP] [GO:0031977 "thylakoid lumen" evidence=IDA]
[GO:0009941 "chloroplast envelope" evidence=IDA] [GO:0009579
"thylakoid" evidence=IDA] [GO:0010304 "PSII associated
light-harvesting complex II catabolic process" evidence=RCA;TAS]
[GO:0016020 "membrane" evidence=IDA] [GO:0030163 "protein catabolic
process" evidence=IDA] [GO:0072593 "reactive oxygen species
metabolic process" evidence=IDA] [GO:0009534 "chloroplast
thylakoid" evidence=IDA] [GO:0006098 "pentose-phosphate shunt"
evidence=RCA] [GO:0006364 "rRNA processing" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010207
"photosystem II assembly" evidence=RCA] [GO:0034660 "ncRNA
metabolic process" evidence=RCA] [GO:0035304 "regulation of protein
dephosphorylation" evidence=RCA] [GO:0042744 "hydrogen peroxide
catabolic process" evidence=RCA] [GO:0042793 "transcription from
plastid promoter" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0010206
"photosystem II repair" evidence=IMP] InterPro:IPR000642
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005936 Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0007275 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872 GO:GO:0006508
GO:GO:0009941 GO:GO:0008237 GO:GO:0004222 EMBL:AC004669
GO:GO:0010027 GO:GO:0072593 GO:GO:0010205 eggNOG:COG0465
TIGRFAMs:TIGR01241 HSSP:Q9WZ49 GO:GO:0009535 GO:GO:0031977
GO:GO:0004176 GO:GO:0010206 HOGENOM:HOG000217276 KO:K03798
GO:GO:0010304 EMBL:AF135189 EMBL:AY045599 EMBL:AY093791
EMBL:AK221155 IPI:IPI00546467 PIR:F84714 RefSeq:NP_850156.1
UniGene:At.22024 UniGene:At.71129 UniGene:At.75189
ProteinModelPortal:O80860 SMR:O80860 IntAct:O80860 STRING:O80860
MEROPS:M41.005 World-2DPAGE:0003:O80860 PaxDb:O80860 PRIDE:O80860
ProMEX:O80860 EnsemblPlants:AT2G30950.1 GeneID:817646
KEGG:ath:AT2G30950 GeneFarm:2504 TAIR:At2g30950 InParanoid:O80860
OMA:LEIIAMR PhylomeDB:O80860 ProtClustDB:CLSN2679937
Genevestigator:O80860 Uniprot:O80860
Length = 695
Score = 375 (137.1 bits), Expect = 7.5e-34, P = 7.5e-34
Identities = 87/248 (35%), Positives = 141/248 (56%)
Query: 189 QSRYSDQLDAPSVPNVSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGP 242
QS+ Q++ P+ V+++D+ G+ + K + + + + G K G+LL GP
Sbjct: 211 QSKAKFQME-PNT-GVTFDDVAGVDEAKQDFMEVVEFLKKPERFTAVGAKIPKGVLLIGP 268
Query: 243 PGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDEL 302
PGTGKTL+AKA+A E + F ++ G E + ++G +R++F KA+ APC+VF DE+
Sbjct: 269 PGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAPCIVFVDEI 328
Query: 303 DSLAPRRGQE-DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRL 361
D++ +RG + ++ ++QLL EMDG + V ++ ATNR D+LD A+LRPGR
Sbjct: 329 DAVGRQRGTGIGGGNDEREQTLNQLLTEMDGFEGNTGVIVVAATNRADILDSALLRPGRF 388
Query: 362 DKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTR 421
D+ + V + D + +LK K +DVSL+ + P SGAD+ ++ + A
Sbjct: 389 DRQVSVDV-PDVKGRTDILKVHAGNKKFDNDVSLEIIAMRTPG-FSGADLANLLNEAAIL 446
Query: 422 AIRRIITS 429
A RR TS
Sbjct: 447 AGRRARTS 454
>FB|FBgn0034792 [details] [associations]
symbol:CG3499 species:7227 "Drosophila melanogaster"
[GO:0004176 "ATP-dependent peptidase activity" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0004222 "metalloendopeptidase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
HAMAP:MF_01458 InterPro:IPR000642 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005936
Pfam:PF00004 Pfam:PF01434 PROSITE:PS00674 SMART:SM00382
EMBL:AE013599 GO:GO:0005524 GO:GO:0016020 GO:GO:0006508
GO:GO:0004222 GO:GO:0030163 eggNOG:COG0465 GO:GO:0017111
TIGRFAMs:TIGR01241 HSSP:Q9LCZ4 GeneTree:ENSGT00550000074836
KO:K08955 EMBL:AY051480 RefSeq:NP_726263.1 UniGene:Dm.4589
SMR:Q9W1Y0 IntAct:Q9W1Y0 MINT:MINT-924656
EnsemblMetazoa:FBtr0071906 GeneID:37636 KEGG:dme:Dmel_CG3499
UCSC:CG3499-RB FlyBase:FBgn0034792 InParanoid:Q9W1Y0
OrthoDB:EOG4Z613M GenomeRNAi:37636 NextBio:804672 Uniprot:Q9W1Y0
Length = 736
Score = 375 (137.1 bits), Expect = 9.2e-34, P = 9.2e-34
Identities = 96/271 (35%), Positives = 143/271 (52%)
Query: 199 PSVPNVSWEDIGGLSKLKAEI------LSTFRGVNRTSGLKRSGLLLYGPPGTGKTLIAK 252
P NV++ED+ G + K E+ L + + G G+LL GPPGTGKTL+A+
Sbjct: 292 PEEINVTFEDVKGCDEAKQELKEVVEFLKSPEKFSNLGGKLPKGVLLVGPPGTGKTLLAR 351
Query: 253 AVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQE 312
AVA E ++ F GPE +GQ +R++F A++ APCV+F DE+DS+ +R
Sbjct: 352 AVAGEAKVPFFHAAGPEFDEVLVGQGARRVRDLFKAAKARAPCVIFIDEIDSVGAKR-TN 410
Query: 313 DQSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYED 372
++ ++QLL+EMDG H + V +LGATNR D LD A+LRPGR D + V D
Sbjct: 411 SVLHPYANQTINQLLSEMDGFHQNAGVIVLGATNRRDDLDQALLRPGRFDVEVMVST-PD 469
Query: 373 RISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIRRIITSAPQ 432
+ +L + K L D++ LD L S +GAD+ ++ + A A+R I A
Sbjct: 470 FTGRKEILSLYLTKI-LHDEIDLDMLARG-TSGFTGADLENMINQA---ALRAAIDGAET 524
Query: 433 VKSAPVIVTMDDFL-GACSLATAPDKFSQSV 462
V + D L G A PD+ + ++
Sbjct: 525 VSMKHLETARDKVLMGPERKARLPDEEANTI 555
>GENEDB_PFALCIPARUM|PF11_0314 [details] [associations]
symbol:PF11_0314 "26S protease subunit
regulatory subunit 6a, putative" species:5833 "Plasmodium
falciparum" [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
EMBL:AE014186 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 87/258 (33%), Positives = 142/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILSTFRGVN-RT 229
+D I D L Y +++ A V P+ + DIGGL K ++A +L
Sbjct: 155 KDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEK 214
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+K G+L++GPPGTGKTL+A+A A++ FL + GP+L+ +IG + +R+ F
Sbjct: 215 IGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNL 274
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R + S + R + +LL ++DG T V ++ ATNR
Sbjct: 275 AKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNR 334
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
D LDPA+LR GRLD+ + + + + S+ +L+ RK + DV+ + L +
Sbjct: 335 PDTLDPALLRSGRLDRKIELP-HPNEESRARILQIHSRKMNVHKDVNFEELARS-TDDFN 392
Query: 408 GADIYSICSNAWTRAIRR 425
GA + ++C A A+RR
Sbjct: 393 GAQLKAVCVEAGMIALRR 410
>UNIPROTKB|F1NDQ1 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00819977
Ensembl:ENSGALT00000013163 Uniprot:F1NDQ1
Length = 385
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 101 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 160
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 161 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 220
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 221 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 280
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 281 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 338
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 339 GAQCKAVCVEAGMIALRR 356
>UNIPROTKB|F1P3L9 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
GeneTree:ENSGT00560000077230 TIGRFAMs:TIGR01242 OMA:GALMYGP
EMBL:AADN02033470 EMBL:AADN02033469 IPI:IPI00601469
Ensembl:ENSGALT00000038503 Uniprot:F1P3L9
Length = 389
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 105 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 164
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 165 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 224
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 225 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 284
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 285 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 342
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 343 GAQCKAVCVEAGMIALRR 360
>UNIPROTKB|F1PBK7 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0017111 GeneTree:ENSGT00560000077230
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:AAEX03011486
Ensembl:ENSCAFT00000013842 Uniprot:F1PBK7
Length = 439
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 155 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 214
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 274
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 275 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 334
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 335 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 392
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 393 GAQCKAVCVEAGMIALRR 410
>UNIPROTKB|E9PM69 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AC090559 TIGRFAMs:TIGR01242 HGNC:HGNC:9549
ChiTaRS:PSMC3 IPI:IPI00979423 ProteinModelPortal:E9PM69 SMR:E9PM69
PRIDE:E9PM69 Ensembl:ENST00000530912 ArrayExpress:E9PM69
Bgee:E9PM69 Uniprot:E9PM69
Length = 397
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 113 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 172
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 173 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 232
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 233 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 292
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 293 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 350
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 351 GAQCKAVCVEAGMIALRR 368
>UNIPROTKB|P17980 [details] [associations]
symbol:PSMC3 "26S protease regulatory subunit 6A"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0001824
"blastocyst development" evidence=IEA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=TAS] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0000502 "proteasome complex"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] Reactome:REACT_13505 Reactome:REACT_578
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_6850
Reactome:REACT_111217 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0003714
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0019048 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
EMBL:CH471064 Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981
GO:GO:0044281 GO:GO:0000082 GO:GO:0003713 GO:GO:0051436
GO:GO:0017111 GO:GO:0000932 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
GO:GO:0001824 Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624 OMA:GALMYGP
EMBL:AK313518 EMBL:BC008713 EMBL:BC073165 EMBL:BC106920
EMBL:BC107804 EMBL:AK222485 EMBL:M34079 EMBL:CR456731
IPI:IPI00018398 PIR:A34832 RefSeq:NP_002795.2 UniGene:Hs.250758
ProteinModelPortal:P17980 SMR:P17980 DIP:DIP-27555N IntAct:P17980
MINT:MINT-1149785 STRING:P17980 PhosphoSite:P17980 DMDM:20532406
REPRODUCTION-2DPAGE:IPI00018398 PaxDb:P17980 PeptideAtlas:P17980
PRIDE:P17980 DNASU:5702 Ensembl:ENST00000298852 GeneID:5702
KEGG:hsa:5702 UCSC:uc001nfh.2 CTD:5702 GeneCards:GC11M047440
HGNC:HGNC:9549 HPA:HPA006065 MIM:186852 neXtProt:NX_P17980
PharmGKB:PA33894 InParanoid:P17980 OrthoDB:EOG46143Z
PhylomeDB:P17980 ChiTaRS:PSMC3 GenomeRNAi:5702 NextBio:22154
PMAP-CutDB:P17980 ArrayExpress:P17980 Bgee:P17980 CleanEx:HS_PSMC3
Genevestigator:P17980 GermOnline:ENSG00000165916 Uniprot:P17980
Length = 439
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 155 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 214
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 274
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 275 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 334
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 335 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 392
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 393 GAQCKAVCVEAGMIALRR 410
>UNIPROTKB|F1SID4 [details] [associations]
symbol:PSMC3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 GeneTree:ENSGT00560000077230 GO:GO:0001824
TIGRFAMs:TIGR01242 OMA:GALMYGP EMBL:CU856312
Ensembl:ENSSSCT00000014459 Uniprot:F1SID4
Length = 446
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 162 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 221
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 222 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 281
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 282 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 341
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 342 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 399
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 400 GAQCKAVCVEAGMIALRR 417
>UNIPROTKB|Q8II60 [details] [associations]
symbol:PF11_0314 "26S protease subunit regulatory subunit
6a, putative" species:36329 "Plasmodium falciparum 3D7" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0004175 "endopeptidase
activity" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0006508 "proteolysis" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0006508 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 EMBL:AE014186
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
ProtClustDB:CLSZ2433711 RefSeq:XP_001347985.1
ProteinModelPortal:Q8II60 IntAct:Q8II60 MINT:MINT-1730387
PRIDE:Q8II60 EnsemblProtists:PF11_0314:mRNA GeneID:810861
KEGG:pfa:PF11_0314 EuPathDB:PlasmoDB:PF3D7_1130400 Uniprot:Q8II60
Length = 439
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 87/258 (33%), Positives = 142/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILSTFRGVN-RT 229
+D I D L Y +++ A V P+ + DIGGL K ++A +L
Sbjct: 155 KDSYLIIDKLPQEYDNRVKAMEVIEKPSEDYSDIGGLDKQIEDLVEAIVLPMLHKEKFEK 214
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+K G+L++GPPGTGKTL+A+A A++ FL + GP+L+ +IG + +R+ F
Sbjct: 215 IGIKPPKGVLMHGPPGTGKTLLARACASQTNATFLKLAGPQLVQMFIGDGAKMVRDAFNL 274
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R + S + R + +LL ++DG T V ++ ATNR
Sbjct: 275 AKEKAPAIIFIDELDAIGTKRFDSELSGDREVQRTMLELLNQLDGFSTDDTVKVIAATNR 334
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
D LDPA+LR GRLD+ + + + + S+ +L+ RK + DV+ + L +
Sbjct: 335 PDTLDPALLRSGRLDRKIELP-HPNEESRARILQIHSRKMNVHKDVNFEELARS-TDDFN 392
Query: 408 GADIYSICSNAWTRAIRR 425
GA + ++C A A+RR
Sbjct: 393 GAQLKAVCVEAGMIALRR 410
>MGI|MGI:1098754 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit,
ATPase 3" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0001824 "blastocyst development" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1098754 GO:GO:0005524 GO:GO:0005634
GO:GO:0030163 GO:GO:0017111 GO:GO:0000932
GeneTree:ENSGT00560000077230 GO:GO:0001824 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03065 GO:GO:0022624
CTD:5702 ChiTaRS:PSMC3 EMBL:D49686 EMBL:AB040858 EMBL:AY902337
EMBL:AL691439 EMBL:BC005783 IPI:IPI00133206 RefSeq:NP_032974.2
UniGene:Mm.289832 ProteinModelPortal:O88685 SMR:O88685
IntAct:O88685 STRING:O88685 PhosphoSite:O88685 PaxDb:O88685
PRIDE:O88685 Ensembl:ENSMUST00000067663 GeneID:19182 KEGG:mmu:19182
NextBio:295874 Bgee:O88685 Genevestigator:O88685
GermOnline:ENSMUSG00000002102 Uniprot:O88685
Length = 442
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 158 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 217
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 218 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 277
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 278 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 337
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 338 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 395
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 396 GAQCKAVCVEAGMIALRR 413
>RGD|61905 [details] [associations]
symbol:Psmc3 "proteasome (prosome, macropain) 26S subunit, ATPase
3" species:10116 "Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:0001824 "blastocyst development"
evidence=IEA;ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA;ISO;ISS]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:61905 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0030163 GO:GO:0017111
GO:GO:0000932 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
KO:K03065 GO:GO:0022624 CTD:5702 EMBL:D83522 EMBL:U77918
IPI:IPI00421528 RefSeq:NP_113783.1 UniGene:Rn.11173
ProteinModelPortal:Q63569 IntAct:Q63569 STRING:Q63569
PhosphoSite:Q63569 PRIDE:Q63569 GeneID:29677 KEGG:rno:29677
UCSC:RGD:61905 NextBio:610019 ArrayExpress:Q63569
Genevestigator:Q63569 GermOnline:ENSRNOG00000011414 Uniprot:Q63569
Length = 439
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 155 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 214
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 215 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 274
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 275 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 334
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 335 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 392
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 393 GAQCKAVCVEAGMIALRR 410
>UNIPROTKB|Q6P6U2 [details] [associations]
symbol:Psmc3 "26S protease regulatory subunit 6A"
species:10116 "Rattus norvegicus" [GO:0001824 "blastocyst
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:61905 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:CH473949
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
IPI:IPI00421528 UniGene:Rn.11173 EMBL:BC062019 SMR:Q6P6U2
IntAct:Q6P6U2 STRING:Q6P6U2 Ensembl:ENSRNOT00000015757
Genevestigator:Q6P6U2 Uniprot:Q6P6U2
Length = 442
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 84/258 (32%), Positives = 143/258 (55%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSKLKAEILSTF-RGVNRTS---- 230
+D I + L + Y ++ A V P + DIGGL K E++ +N
Sbjct: 158 KDSYLILETLPTEYDSRVKAMEVDERPTEQYSDIGGLDKQIQELVEAIVLPMNHKEKFEN 217
Query: 231 -GLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G++ G+L+YGPPGTGKTL+A+A A + + FL + GP+L+ +IG + +R+ F
Sbjct: 218 LGIQPPKGVLMYGPPGTGKTLLARACAAQTKATFLKLAGPQLVQMFIGDGAKLVRDAFAL 277
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + V ++ ATNR
Sbjct: 278 AKEKAPSIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNTQVKVIAATNR 337
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
VD+LDPA+LR GRLD+ + + + ++ +++ RK +S DV+ + L +
Sbjct: 338 VDILDPALLRSGRLDRKIEFPMPNEE-ARARIMQIHSRKMNVSPDVNYEELAR-CTDDFN 395
Query: 408 GADIYSICSNAWTRAIRR 425
GA ++C A A+RR
Sbjct: 396 GAQCKAVCVEAGMIALRR 413
>WB|WBGene00004505 [details] [associations]
symbol:rpt-5 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853
GO:GO:0017111 GeneTree:ENSGT00560000077230 EMBL:FO080337
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143
OMA:GALMYGP PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371
SMR:O76371 IntAct:O76371 MINT:MINT-211164 STRING:O76371
PaxDb:O76371 EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2
GeneID:172238 KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238
WormBase:F56H1.4 InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 83/261 (31%), Positives = 147/261 (56%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILS-TFRGVNRT 229
+D I + L + Y ++ A V P + DIGG K ++A +L T +
Sbjct: 146 KDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVN 205
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+ G+L+YGPPGTGKT++A+AVA + + FL + GP+L+ +IG + +R+ F
Sbjct: 206 LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFAL 265
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + D+ ++ ATNR
Sbjct: 266 AKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNR 325
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
+D+LDPA+LR GRLD+ + + + + ++ +++ RK ++ DV+ + L +
Sbjct: 326 IDVLDPALLRSGRLDRKIELP-HPNEDARARIMQIHSRKMNVNKDVNFEELAR-CTDDFN 383
Query: 408 GADIYSICSNAWTRAIRRIIT 428
GA ++C A A+RR T
Sbjct: 384 GAQCKAVCVEAGMIALRRDAT 404
>UNIPROTKB|O76371 [details] [associations]
symbol:rpt-5 "Protein RPT-5" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0005737
GO:GO:0002119 GO:GO:0000003 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111
GeneTree:ENSGT00560000077230 EMBL:FO080337 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03065 HOGENOM:HOG000225143 OMA:GALMYGP
PIR:T33155 RefSeq:NP_491672.1 ProteinModelPortal:O76371 SMR:O76371
IntAct:O76371 MINT:MINT-211164 STRING:O76371 PaxDb:O76371
EnsemblMetazoa:F56H1.4.1 EnsemblMetazoa:F56H1.4.2 GeneID:172238
KEGG:cel:CELE_F56H1.4 UCSC:F56H1.4.2 CTD:172238 WormBase:F56H1.4
InParanoid:O76371 NextBio:874627 Uniprot:O76371
Length = 430
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 83/261 (31%), Positives = 147/261 (56%)
Query: 179 EDFQQIYDDLQSRYSDQLDAPSV---PNVSWEDIGGLSK-----LKAEILS-TFRGVNRT 229
+D I + L + Y ++ A V P + DIGG K ++A +L T +
Sbjct: 146 KDSYLILEKLPAEYDSRVKAMEVDERPTEQYSDIGGCDKQIQELIEAVVLPMTHKDRFVN 205
Query: 230 SGLKR-SGLLLYGPPGTGKTLIAKAVATECRMNFLAVKGPELLNKYIGQSEENIRNVFLK 288
G+ G+L+YGPPGTGKT++A+AVA + + FL + GP+L+ +IG + +R+ F
Sbjct: 206 LGIHPPKGVLMYGPPGTGKTMMARAVAAQTKSTFLKLAGPQLVQMFIGDGAKLVRDAFAL 265
Query: 289 ARSAAPCVVFFDELDSLAPRRGQEDQSSG-VMDRVVSQLLAEMDGVHTSQDVFILGATNR 347
A+ AP ++F DELD++ +R +++ + R + +LL ++DG + D+ ++ ATNR
Sbjct: 266 AKEKAPAIIFIDELDAIGTKRFDSEKAGDREVQRTMLELLNQLDGFQPNDDIKVIAATNR 325
Query: 348 VDLLDPAILRPGRLDKSLYVGLYEDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMS 407
+D+LDPA+LR GRLD+ + + + + ++ +++ RK ++ DV+ + L +
Sbjct: 326 IDVLDPALLRSGRLDRKIELP-HPNEDARARIMQIHSRKMNVNKDVNFEELAR-CTDDFN 383
Query: 408 GADIYSICSNAWTRAIRRIIT 428
GA ++C A A+RR T
Sbjct: 384 GAQCKAVCVEAGMIALRRDAT 404
>UNIPROTKB|E1BFQ0 [details] [associations]
symbol:E1BFQ0 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042407 "cristae formation" evidence=IEA] [GO:0034982
"mitochondrial protein processing" evidence=IEA] [GO:0008053
"mitochondrial fusion" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0004222
"metalloendopeptidase activity" evidence=IEA] HAMAP:MF_01458
InterPro:IPR000642 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005936 InterPro:IPR011546
Pfam:PF00004 Pfam:PF01434 Pfam:PF06480 PROSITE:PS00674
SMART:SM00382 GO:GO:0016021 GO:GO:0005739 GO:GO:0005524
GO:GO:0008270 GO:GO:0006508 GO:GO:0004222 GO:GO:0030163
GeneTree:ENSGT00530000063070 OMA:WDEKDFR GO:GO:0017111
GO:GO:0042407 GO:GO:0008053 GO:GO:0034982 TIGRFAMs:TIGR01241
EMBL:DAAA02046282 IPI:IPI00707325 Ensembl:ENSBTAT00000056979
Uniprot:E1BFQ0
Length = 802
Score = 375 (137.1 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 84/235 (35%), Positives = 130/235 (55%)
Query: 204 VSWEDIGGLSKLKAEILSTFRGVNRTS-----GLK-RSGLLLYGPPGTGKTLIAKAVATE 257
V + D+ G + K EI+ + G K G LL GPPGTGKTL+AKA A E
Sbjct: 300 VRFADVAGCEEAKLEIMEFVNFLKNPKQYQDLGAKIPKGALLTGPPGTGKTLLAKATAGE 359
Query: 258 CRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED-QSS 316
+ F+ V G E L ++G +R++F AR APC++F DE+D++ +RG+
Sbjct: 360 AGVPFITVNGSEFLEMFVGVGPARVRDMFALARKNAPCILFVDEIDAIGRKRGRGHFGGQ 419
Query: 317 GVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDRISQ 376
+ ++QLL EMDG +++ +V +L TNR D+LDPA++RPGR D+ +Y+G D +
Sbjct: 420 SEQENTLNQLLVEMDGFNSTTNVVVLAGTNRPDVLDPALMRPGRFDRQIYIGP-PDIKGR 478
Query: 377 LGVLKAVVRKFKLSDDVSLDSLVHHFPSQM-----SGADIYSICSNAWTRAIRRI 426
+ + +R KL + +S D+L + SGADI ++C+ A A R +
Sbjct: 479 SSIFRVHLRPLKLDESLSKDALARKLAALTPGFTGSGADISNVCNEAALIAARHL 533
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 77/231 (33%), Positives = 135/231 (58%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL + E+ + + G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 173 VPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARA 232
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ +R + +
Sbjct: 233 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE 292
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ R + +LL ++DG ++Q++ ++ TNR+D+LD A+LRPGR+D+ + +
Sbjct: 293 HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP-NPNV 351
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ +LK RK L + + + + SGA++ ++C+ A A+R
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLKIATDM-NNCSGAEVKAVCTEAGMFALR 401
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 77/231 (33%), Positives = 135/231 (58%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ ++E +GGL + E+ + + G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 173 VPDSTYEMVGGLDQQVKEVKEVIELPVKHPEIFESLGISQPKGVLLYGPPGTGKTLLARA 232
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ +R + +
Sbjct: 233 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSQRIEGE 292
Query: 314 QSSGVMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSLYVGLYEDR 373
+ R + +LL ++DG ++Q++ ++ TNR+D+LD A+LRPGR+D+ + +
Sbjct: 293 HGDSEVQRTMMELLNQLDGFESTQNIKVIMCTNRIDILDEALLRPGRIDRKIEFP-NPNV 351
Query: 374 ISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
+++ +LK RK L + + + + SGA++ ++C+ A A+R
Sbjct: 352 EARMEILKIHSRKMNLMRGIDMLKIATDM-NNCSGAEVKAVCTEAGMFALR 401
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 84/234 (35%), Positives = 134/234 (57%)
Query: 201 VPNVSWEDIGGLSKLKAEILSTFR------GVNRTSGLKR-SGLLLYGPPGTGKTLIAKA 253
VP+ +++ IGGL + EI + + G+ + G+LLYGPPGTGKTL+A+A
Sbjct: 155 VPDSTYDMIGGLDQQIKEIKEVIELPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARA 214
Query: 254 VATECRMNFLAVKGPELLNKYIGQSEENIRNVFLKARSAAPCVVFFDELDSLAPRRGQED 313
VA F+ V G EL+ KYIG+ +R +F+ AR AP ++F DE+DS+ R +
Sbjct: 215 VAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSARMESG 274
Query: 314 QSSG--VMDRVVSQLLAEMDGVHTSQDVFILGATNRVDLLDPAILRPGRLDKSL-YVGLY 370
+G + R + +LL ++DG S + +L ATNR+D+LD A+LRPGR+D+ + +
Sbjct: 275 SGNGDSEVQRTMLELLNQLDGFEASNKIKVLMATNRIDILDQALLRPGRIDRKIEFPNPN 334
Query: 371 EDRISQLGVLKAVVRKFKLSDDVSLDSLVHHFPSQMSGADIYSICSNAWTRAIR 424
E+ S+ +LK RK L + L + + SGA++ ++C+ A A+R
Sbjct: 335 EE--SRFDILKIHSRKMNLMRGIDLKKIAEKM-NGASGAELKAVCTEAGMFALR 385
WARNING: HSPs involving 474 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.137 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 478 466 0.00097 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 724
No. of states in DFA: 614 (65 KB)
Total size of DFA: 263 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 39.05u 0.10s 39.15t Elapsed: 00:00:17
Total cpu time: 39.13u 0.10s 39.23t Elapsed: 00:00:17
Start: Thu Aug 15 13:32:53 2013 End: Thu Aug 15 13:33:10 2013
WARNINGS ISSUED: 2