Query psy4509
Match_columns 369
No_of_seqs 331 out of 1627
Neff 6.9
Searched_HMMs 46136
Date Fri Aug 16 18:59:03 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4509.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/4509hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1379|consensus 100.0 3E-64 6.4E-69 474.3 24.2 259 11-367 68-330 (330)
2 COG0631 PTC1 Serine/threonine 100.0 7.4E-34 1.6E-38 270.3 20.7 217 89-368 8-252 (262)
3 PLN03145 Protein phosphatase 2 100.0 3E-32 6.6E-37 269.7 22.6 216 91-368 66-330 (365)
4 PTZ00224 protein phosphatase 2 100.0 1.2E-31 2.5E-36 266.6 22.2 214 90-368 22-271 (381)
5 cd00143 PP2Cc Serine/threonine 100.0 5.5E-29 1.2E-33 231.9 19.4 213 93-367 4-254 (254)
6 PRK14559 putative protein seri 100.0 8.2E-29 1.8E-33 259.3 19.2 213 92-368 378-635 (645)
7 smart00332 PP2Cc Serine/threon 100.0 6.8E-28 1.5E-32 225.4 21.2 211 95-365 11-255 (255)
8 KOG0698|consensus 99.9 8.5E-27 1.8E-31 228.8 18.6 217 91-367 41-303 (330)
9 PF00481 PP2C: Protein phospha 99.9 1.1E-27 2.3E-32 226.4 9.6 199 93-331 3-248 (254)
10 KOG0697|consensus 99.9 7.9E-27 1.7E-31 216.5 13.3 219 91-367 23-290 (379)
11 KOG1323|consensus 99.8 5.8E-19 1.3E-23 167.8 15.1 79 279-367 405-486 (493)
12 KOG0699|consensus 99.8 1.1E-18 2.4E-23 167.4 16.6 139 208-367 331-502 (542)
13 KOG0700|consensus 99.8 9.2E-19 2E-23 171.1 16.1 115 213-331 207-377 (390)
14 smart00331 PP2C_SIG Sigma fact 99.8 9.4E-18 2E-22 151.4 20.6 173 104-329 17-192 (193)
15 TIGR02865 spore_II_E stage II 99.7 1.5E-16 3.2E-21 171.6 22.7 192 102-367 565-763 (764)
16 PF07228 SpoIIE: Stage II spor 99.7 3.6E-16 7.9E-21 140.6 21.7 178 117-367 5-192 (193)
17 PF13672 PP2C_2: Protein phosp 99.7 2.4E-18 5.1E-23 157.5 6.4 170 101-308 9-194 (212)
18 KOG1379|consensus 99.4 3.9E-13 8.5E-18 128.1 8.7 118 7-126 70-201 (330)
19 COG2208 RsbU Serine phosphatas 98.9 1.8E-07 3.8E-12 93.4 21.5 194 103-368 161-366 (367)
20 KOG0618|consensus 98.6 1.2E-07 2.7E-12 101.5 9.4 118 220-367 628-771 (1081)
21 PRK10693 response regulator of 90.0 5.3 0.00012 38.7 12.3 106 104-241 150-259 (303)
22 PF09436 DUF2016: Domain of un 52.8 7.8 0.00017 29.7 1.3 18 280-297 25-42 (72)
23 PF05674 DUF816: Baculovirus p 52.3 25 0.00053 31.2 4.4 45 46-90 2-47 (171)
24 smart00332 PP2Cc Serine/threon 36.8 1.7E+02 0.0037 26.6 7.9 92 30-123 16-130 (255)
25 COG2168 DsrH Uncharacterized c 36.3 26 0.00056 28.4 1.9 30 279-308 22-51 (96)
26 PF07228 SpoIIE: Stage II spor 33.2 2.7E+02 0.0058 24.1 8.3 77 44-124 15-91 (193)
27 PF06972 DUF1296: Protein of u 31.9 64 0.0014 23.8 3.2 27 296-327 19-45 (60)
28 cd00143 PP2Cc Serine/threonine 30.0 2.8E+02 0.0062 24.9 8.2 31 91-123 97-127 (254)
29 COG3700 AphA Acid phosphatase 28.9 90 0.002 28.5 4.3 52 279-332 68-130 (237)
30 PRK12764 hypothetical protein; 20.6 1.1E+02 0.0025 32.0 4.0 75 276-358 423-498 (500)
No 1
>KOG1379|consensus
Probab=100.00 E-value=3e-64 Score=474.33 Aligned_cols=259 Identities=49% Similarity=0.817 Sum_probs=231.6
Q ss_pred EEEeeeCCCCCCCCccccccCCCCCceeeeeccCCCCHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHhccCcc
Q psy4509 11 LFSAVSGIPKDFSNNKMFQLNKYGDDAYFTARYKTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQP 90 (369)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~geda~f~~~~~~~~~~~~s~~L~~~~~~~~~~~~~~~~~p~~lL~~~~~~~~~~~~~ 90 (369)
+|+..|+++|+....+..|.++|||||||||++...
T Consensus 68 ~vt~~~~~~~~~~~~~~~~~~~~GEDa~Fvss~~~~-------------------------------------------- 103 (330)
T KOG1379|consen 68 LVTSLCGFSKDFIRPHPSKVGKGGEDAWFVSSNPHA-------------------------------------------- 103 (330)
T ss_pred hhhhhccccccccCCccccCCCCCCcceeeccCccc--------------------------------------------
Confidence 666666666665444444999999999999998543
Q ss_pred ccccceeeeeeccCCceEEEeccCCCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Q psy4509 91 ILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYE 170 (369)
Q Consensus 91 ~~G~st~~~~r~~neD~~~~~~~~g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~ 170 (369)
.+++||||||||+..|+||+.|+++||.+|+++.++..+.+.+|..+|.+||.+
T Consensus 104 --------------------------~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P~~lL~~ay~~ 157 (330)
T KOG1379|consen 104 --------------------------IVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDPVNLLEKAYAE 157 (330)
T ss_pred --------------------------ceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCChHHHHHHHHHH
Confidence 256799999999999999999999999999999998888889999999999999
Q ss_pred HHHccCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEEEeCccccc
Q psy4509 171 LLENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQH 250 (369)
Q Consensus 171 ~~~~~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h 250 (369)
+.+.+.+..|+|||| ++.+++++++||+||+|||++.++|+|++++.|.+|+|
T Consensus 158 l~~~~~~~vGSSTAc---------------------------I~~l~~~~~~Lh~aNLGDSGF~VvR~G~vv~~S~~Q~H 210 (330)
T KOG1379|consen 158 LKSQKVPIVGSSTAC---------------------------ILALDRENGKLHTANLGDSGFLVVREGKVVFRSPEQQH 210 (330)
T ss_pred HhhcCCCCCCcceee---------------------------eeeeecCCCeEEEeeccCcceEEEECCEEEEcCchhee
Confidence 998888888999999 67788779999999999999999999999999999999
Q ss_pred ccCCcccccCCCCCCCC---Cccccceeeee-ecCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHH
Q psy4509 251 YFNTPFQLSLPPLSHTT---QVLESCKRRGL-VVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIAL 326 (369)
Q Consensus 251 ~~~~p~ql~~~~~~~~~---~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~ 326 (369)
+||+|||+...|++... +.++.++..++ +++||+||||||||||||++++|+.++...... ...++|..|++|++
T Consensus 211 ~FN~PyQLs~~p~~~~~~~~d~p~~ad~~~~~v~~GDvIilATDGlfDNl~e~~Il~il~~~~~~-~~~~lq~~A~~ia~ 289 (330)
T KOG1379|consen 211 YFNTPYQLSSPPEGYSSYISDVPDSADVTSFDVQKGDVIILATDGLFDNLPEKEILSILKGLDAR-GNLDLQVTAQKIAE 289 (330)
T ss_pred ccCCceeeccCCccccccccCCccccceEEEeccCCCEEEEecccccccccHHHHHHHHHHhhcc-ccccHHHHHHHHHH
Confidence 99999999998875532 23366788899 999999999999999999999999999987532 46789999999999
Q ss_pred HHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509 327 MARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIV 367 (369)
Q Consensus 327 ~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v 367 (369)
.|+++|+|+++.||||.+||++|.++.|||+|||||||+.|
T Consensus 290 ~Ar~ls~d~~~~SPFA~~Ar~~g~~~~gGK~DdITvvls~v 330 (330)
T KOG1379|consen 290 KARELSRDPKFQSPFAQAAREHGFKAYGGKPDDITVVLSSV 330 (330)
T ss_pred HHHHhccCcCcCChHHHHHHHhCcccCCCCcccEEEEEecC
Confidence 99999999999999999999999999999999999999875
No 2
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms]
Probab=100.00 E-value=7.4e-34 Score=270.32 Aligned_cols=217 Identities=28% Similarity=0.381 Sum_probs=153.5
Q ss_pred ccccccceeeeeeccCCceEEEeccCC---CcEEEEEcCCcccccCCCChhHHHHHHH-HHHHHHHhcCCCCCCC--HHH
Q psy4509 89 QPILGSSTACIVILNKETSTLCTANIG---NSIVRVADGVGGWRNYGIDPGEFSSFLM-KTCERLVTSGRFSCTE--PTS 162 (369)
Q Consensus 89 ~~~~G~st~~~~r~~neD~~~~~~~~g---~~~faVaDGvGG~~~~g~~a~~~a~~l~-~~~~~~~~~~~~~~~~--~~~ 162 (369)
....+.+..+.+|.+|||++.+..+.. ..+|+||||||||+. |++++.++ ..+.+.+.+..+.... ..+
T Consensus 8 ~~~~~~s~~g~~R~~NeD~~~~~~~~~~~~~~l~~V~DG~GGh~~-----ge~aS~~~v~~l~~~~~~~~~~~~~~~~~~ 82 (262)
T COG0631 8 LKVAGLSDVGTVRKHNEDAFLIKPNENGNLLLLFAVADGMGGHAA-----GEVASKLAVEALARLFDETNFNSLNESLEE 82 (262)
T ss_pred eeeeeeccCCCccCCCCcceeeccccCCcceeEEEEEeCccchhH-----HHHHHHHHHHHHHHHHHhccccccchhHHH
Confidence 345567777899999999999887554 249999999999874 55655443 4444555443222222 456
Q ss_pred HHHHHHHHHHH----cc---CCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEE
Q psy4509 163 LLARSYYELLE----NK---QPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVI 235 (369)
Q Consensus 163 ~L~~a~~~~~~----~~---~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl 235 (369)
.|.+++..+.+ .. ....+++|+++ ++++. ++++|+|||||||+|+
T Consensus 83 ~l~~~~~~~n~~i~~~~~~~~~~~~mgtTl~--------------------------~~~~~--~~~l~~a~vGDSR~yl 134 (262)
T COG0631 83 LLKEAILKANEAIAEEGQLNEDVRGMGTTLV--------------------------LLLIR--GNKLYVANVGDSRAYL 134 (262)
T ss_pred HHHHHHHHHHHHHHHhhhcccccCCCceeEE--------------------------EEEEE--CCeEEEEEccCCeEEE
Confidence 66666655432 11 22345555553 34453 6799999999999999
Q ss_pred EECCeEEEeCcccccccCCcccccCCCCCC----C-CCcc---------ccceeeee-ecCCCEEEEeccCCCCCCChHH
Q psy4509 236 VRRGKVIHRSEEQQHYFNTPFQLSLPPLSH----T-TQVL---------ESCKRRGL-VVHGDVILLATDGVFDNVPDSL 300 (369)
Q Consensus 236 ~R~g~i~~lT~dq~h~~~~p~ql~~~~~~~----~-~~vl---------~~~d~~~~-l~~gD~llLaSDGl~D~l~~~e 300 (369)
+|+|++.++|+||... +...+.+..++.. + .+++ ..|++... +++||++|||||||||.|++++
T Consensus 135 ~~~~~~~~lT~DH~~~-~~~~~~~~~~~~~~~~~~~~~~ltralG~~~~~~p~~~~~~~~~~d~llL~SDGl~d~v~~~~ 213 (262)
T COG0631 135 LRDGELKQLTEDHSLV-NRLEQRGIITPEEARSHPRRNALTRALGDFDLLEPDITELELEPGDFLLLCSDGLWDVVSDDE 213 (262)
T ss_pred EcCCceEEeccCCcHH-HHHHHhcCCCHHHHHhCccchhhhhhcCCCcccceeEEEEEcCCCCEEEEECCCCccCcCHHH
Confidence 9999999999996422 2222233222110 0 1111 45788888 9999999999999999999999
Q ss_pred HHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q psy4509 301 LLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVA 368 (369)
Q Consensus 301 i~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v~ 368 (369)
|+++++.. .+++++++.|++.|++ +|..|||||+++.+.
T Consensus 214 i~~il~~~------~~~~~~~~~li~~a~~-----------------------~g~~DNiT~ilv~~~ 252 (262)
T COG0631 214 IVDILKNS------ETPQEAADKLIELALE-----------------------GGGPDNITVVLVRLN 252 (262)
T ss_pred HHHHHhcC------CCHHHHHHHHHHHHHh-----------------------cCCCCceEEEEEEee
Confidence 99999863 4799999999999996 388899999999753
No 3
>PLN03145 Protein phosphatase 2c; Provisional
Probab=100.00 E-value=3e-32 Score=269.75 Aligned_cols=216 Identities=16% Similarity=0.215 Sum_probs=149.6
Q ss_pred ccccceeeeeeccCCceEEEeccC-----------C-CcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCC
Q psy4509 91 ILGSSTACIVILNKETSTLCTANI-----------G-NSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCT 158 (369)
Q Consensus 91 ~~G~st~~~~r~~neD~~~~~~~~-----------g-~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~ 158 (369)
..|..|.++.|.+|||++++..++ + ..+|+|||||||+. +++|++..+... +..... ...
T Consensus 66 ~~~~~s~~G~R~~nED~~~~~~~~~~~~~~~~~~~~~~~lf~V~DGhGG~~-----age~as~~l~~~--i~~~~~-~~~ 137 (365)
T PLN03145 66 RSGAWADIGSRSSMEDVYICVDNFMSDFGLKNSEDGPSAFYGVFDGHGGKH-----AADFACYHLPRF--IVEDED-FPR 137 (365)
T ss_pred EEEEEccccCCCCCCCceEecccccccccccccCCCCceEEEEEeCCCCHH-----HHHHHHHHHHHH--HHhhhc-cch
Confidence 357778888899999999876543 1 25899999999964 677876654322 111111 233
Q ss_pred CHHHHHHHHHHHHHHc-------cCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCC
Q psy4509 159 EPTSLLARSYYELLEN-------KQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDS 231 (369)
Q Consensus 159 ~~~~~L~~a~~~~~~~-------~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDS 231 (369)
.+.++|.+||.++.+. ......|||++ ++++. ++.+|+||||||
T Consensus 138 ~~~~al~~af~~~d~~~~~~~~~~~~~~~GTTav---------------------------v~li~--~~~l~vaNvGDS 188 (365)
T PLN03145 138 EIEKVVSSAFLQTDTAFAEACSLDASLASGTTAL---------------------------AALVV--GRSLVVANAGDC 188 (365)
T ss_pred hHHHHHHHHHHHHhHHHHhhhccccCCCCcCcEE---------------------------EEEEE--CCeEEEEecCCc
Confidence 5677788888776432 11223567766 44554 679999999999
Q ss_pred ceEEEECCeEEEeCcccccccCC-----------ccc---ccC--CCCCCC------------CCccccceeeee-ecCC
Q psy4509 232 GFVIVRRGKVIHRSEEQQHYFNT-----------PFQ---LSL--PPLSHT------------TQVLESCKRRGL-VVHG 282 (369)
Q Consensus 232 r~yl~R~g~i~~lT~dq~h~~~~-----------p~q---l~~--~~~~~~------------~~vl~~~d~~~~-l~~g 282 (369)
|+|++|+|+++++|+||+..-.. .+. .+. +..... ..+..+||+..+ +.++
T Consensus 189 Rayl~r~g~~~~LT~DH~~~~~~E~~RI~~~Gg~v~~g~v~g~l~vTRalGD~~~k~~k~~~~~~vs~ePdv~~~~l~~~ 268 (365)
T PLN03145 189 RAVLCRRGKAIEMSRDHKPMCSKERKRIEASGGYVYDGYLNGQLNVARALGDWHMEGMKGSDGGPLSAEPELMTTQLTEE 268 (365)
T ss_pred eEEEEcCCeEEEecCCCCCCCHHHHHHHHHcCCceecceECCccccccccccccccccccccCCCcceEEEEEEEECCCC
Confidence 99999999999999996532110 000 000 000000 013357888888 8888
Q ss_pred CE-EEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceE
Q psy4509 283 DV-ILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDIT 361 (369)
Q Consensus 283 D~-llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDIT 361 (369)
|. ||||||||||+|+++|+++++.+... ...+|+++|+.|+++|+++ |..||||
T Consensus 269 D~fLILaSDGLwdvls~ee~v~~i~~~l~--~~~~p~~aa~~Lv~~Al~r-----------------------gs~DNIT 323 (365)
T PLN03145 269 DEFLIIGCDGIWDVFRSQNAVDFARRRLQ--EHNDPVMCSKELVDEALKR-----------------------KSGDNLA 323 (365)
T ss_pred CEEEEEeCCccccCcCHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHhC-----------------------CCCCCEE
Confidence 85 56999999999999999888765431 1246899999999999975 7789999
Q ss_pred EEEEEEe
Q psy4509 362 VLLAIVA 368 (369)
Q Consensus 362 Vvv~~v~ 368 (369)
|||+.+.
T Consensus 324 vIVV~l~ 330 (365)
T PLN03145 324 VVVVCFQ 330 (365)
T ss_pred EEEEEee
Confidence 9999874
No 4
>PTZ00224 protein phosphatase 2C; Provisional
Probab=100.00 E-value=1.2e-31 Score=266.64 Aligned_cols=214 Identities=20% Similarity=0.186 Sum_probs=146.4
Q ss_pred cccccceeeeeeccCCceEEEeccCCCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHH
Q psy4509 90 PILGSSTACIVILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYY 169 (369)
Q Consensus 90 ~~~G~st~~~~r~~neD~~~~~~~~g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~ 169 (369)
...|.++.++.|.+|||++++..+....+|+|||||||.. ++.|+...+. +.+.+... ....+.|++++.
T Consensus 22 ~~~g~~s~~G~R~~nED~~~v~~~~~~~lfgVfDGHgG~~-----~S~~~~~~l~---~~l~~~~~--~~~~~~l~~a~~ 91 (381)
T PTZ00224 22 FRCASACVNGYRESMEDAHLLYLTDDWGFFGVFDGHVNDE-----CSQYLARAWP---QALEKEPE--PMTDERMEELCL 91 (381)
T ss_pred EEEEEEeCCCCCCCCCCeeEeccCCCceEEEEEeCCCcHH-----HHHHHHHHHH---HHHHhccc--cccHHHHHHHHH
Confidence 3468888889999999998865544446999999999843 3455444332 33322111 112234666666
Q ss_pred HHHHc--cCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEEEeCcc
Q psy4509 170 ELLEN--KQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEE 247 (369)
Q Consensus 170 ~~~~~--~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~lT~d 247 (369)
.+.+. +....+|||++++ ++. .+.++|++||||||+|++|+|+++++|+|
T Consensus 92 ~~d~~i~~~~~~~GsTatv~---------------------------lI~-~~~~l~vaNVGDSRayl~r~g~~~~LT~D 143 (381)
T PTZ00224 92 EIDEEWMDSGREGGSTGTFC---------------------------VIM-KDVHLQVGNVGDSRVLVCRDGKLVFATED 143 (381)
T ss_pred HHHHHHHhcccCCCCeEEEE---------------------------EEE-ECCEEEEEEcccceEEEEECCEEEEcccC
Confidence 55332 1222467887742 332 24789999999999999999999999999
Q ss_pred cccccCCcccccCC------------------CCCCC--------------CCccccceeeee-ecCCCEEEEeccCCCC
Q psy4509 248 QQHYFNTPFQLSLP------------------PLSHT--------------TQVLESCKRRGL-VVHGDVILLATDGVFD 294 (369)
Q Consensus 248 q~h~~~~p~ql~~~------------------~~~~~--------------~~vl~~~d~~~~-l~~gD~llLaSDGl~D 294 (369)
|+ +..+.+.+++ ..... ..++..||+..+ +++||+||||||||||
T Consensus 144 H~--~~~~~E~~RI~~~gg~v~~~Rv~G~l~vTRalGd~~~K~~~~~~~~~~~v~~~Pdi~~~~l~~~D~llLaSDGL~d 221 (381)
T PTZ00224 144 HK--PNNPGERQRIEACGGRVVSNRVDGDLAVSRAFGDRSFKVKGTGDYLEQKVIAVPDVTHLTCQSNDFIILACDGVFE 221 (381)
T ss_pred CC--CCCHHHHhHHHHccCEeccccccCceeeecccCCcccccccccccccCcceeeeEEEEEECCCCCEEEEECCCcCc
Confidence 64 3222111100 00000 012356888888 9999999999999999
Q ss_pred -CCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q psy4509 295 -NVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVA 368 (369)
Q Consensus 295 -~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v~ 368 (369)
+++++||.+++.+.. ....+++.+|+.|+++|+++ |..|||||||+.+.
T Consensus 222 ~~ls~eEi~~iv~~~l--~~~~~~~~aA~~Lv~~A~~r-----------------------Gs~DNITvIvV~~~ 271 (381)
T PTZ00224 222 GNFSNEEVVAFVKEQL--ETCDDLAVVAGRVCDEAIRR-----------------------GSKDNISCLIVQLK 271 (381)
T ss_pred CccCHHHHHHHHHHHH--hcCCCHHHHHHHHHHHHHhc-----------------------CCCCCEEEEEEEee
Confidence 799999999997542 11247899999999999975 77899999999874
No 5
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=5.5e-29 Score=231.89 Aligned_cols=213 Identities=21% Similarity=0.275 Sum_probs=146.2
Q ss_pred ccceeeeeeccCCceEEEeccC---CCcEEEEEcCCcccccCCCChhHHHHH-HHHHHHHHHhcCCC-CCCCHHHHHHHH
Q psy4509 93 GSSTACIVILNKETSTLCTANI---GNSIVRVADGVGGWRNYGIDPGEFSSF-LMKTCERLVTSGRF-SCTEPTSLLARS 167 (369)
Q Consensus 93 G~st~~~~r~~neD~~~~~~~~---g~~~faVaDGvGG~~~~g~~a~~~a~~-l~~~~~~~~~~~~~-~~~~~~~~L~~a 167 (369)
+.+.....|..|||++++..+. +..+|+||||||||.. +.+++. ++..+.+.+..... ....+...|+++
T Consensus 4 ~~~~~~g~r~~neD~~~~~~~~~~~~~~~~~V~DG~Gg~~~-----~~~as~~~~~~l~~~~~~~~~~~~~~~~~~l~~~ 78 (254)
T cd00143 4 GVSDKGGDRKTNEDAVVIKPNLNNEDGGLFGVFDGHGGHAA-----GEFASKLLVEELLEELEETLTLSEEDIEEALRKA 78 (254)
T ss_pred eeecCCCCCCCCcceEEEeccCCCCCcEEEEEEcCCChHHH-----HHHHHHHHHHHHHHHHhhccccchHHHHHHHHHH
Confidence 3445557788999999987765 4579999999999854 344433 33444333332110 123556667777
Q ss_pred HHHHHHc----c----CCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECC
Q psy4509 168 YYELLEN----K----QPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRG 239 (369)
Q Consensus 168 ~~~~~~~----~----~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g 239 (369)
++.+.+. . ....+|||++ ++++. ++.++++|+||||+|++|++
T Consensus 79 ~~~~~~~l~~~~~~~~~~~~~gtT~~---------------------------~~~~~--~~~l~~~~vGDsr~~~~~~~ 129 (254)
T cd00143 79 FLRADEEILEEAQDEPDDARSGTTAV---------------------------VALIR--GNKLYVANVGDSRAVLCRNG 129 (254)
T ss_pred HHHHHHHHHHhhhhccCCCCCCCcEE---------------------------EEEEE--CCEEEEEEecCcEEEEEcCC
Confidence 7765432 1 1233456655 45554 68999999999999999999
Q ss_pred eEEEeCcccccccCCcccccC------------CCCC------CCCC-----ccccceeeee-e-cCCCEEEEeccCCCC
Q psy4509 240 KVIHRSEEQQHYFNTPFQLSL------------PPLS------HTTQ-----VLESCKRRGL-V-VHGDVILLATDGVFD 294 (369)
Q Consensus 240 ~i~~lT~dq~h~~~~p~ql~~------------~~~~------~~~~-----vl~~~d~~~~-l-~~gD~llLaSDGl~D 294 (369)
+++++|+||.+. .+.+... .+.. .... +...|++... + ++||+||||||||||
T Consensus 130 ~~~~lt~dh~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~t~~lG~~~~~~~~~~~~~~~~~~l~~~~d~ill~SDG~~~ 207 (254)
T cd00143 130 EAVQLTKDHKPV--NEEERERIEKAGGRVSNGRVPGVLAVTRALGDFDLKPGVSAEPDVTVVKLTEDDDFLILASDGLWD 207 (254)
T ss_pred ceeEcCCCCCCc--ChHHHHHHHHcCCcEEeCEEcCceeeccccCCccccCCEEcCCeEEEEEeCCCCcEEEEECCCCee
Confidence 999999996543 1111100 0000 0001 2356778778 8 999999999999999
Q ss_pred CCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509 295 NVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIV 367 (369)
Q Consensus 295 ~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v 367 (369)
++++++|.+++..... ..+++++|+.|++.|... |+.||+||||+.+
T Consensus 208 ~l~~~~i~~~~~~~~~---~~~~~~~a~~l~~~a~~~-----------------------~~~Dn~t~i~~~~ 254 (254)
T cd00143 208 VLSNQEAVDIVRSELA---KEDLQEAAQELVDLALRR-----------------------GSHDNITVVVVRL 254 (254)
T ss_pred ccChHHHHHHHHHHhc---ccCHHHHHHHHHHHHHhC-----------------------CCCCCEEEEEEeC
Confidence 9999999999987520 026999999999999874 6889999999864
No 6
>PRK14559 putative protein serine/threonine phosphatase; Provisional
Probab=99.96 E-value=8.2e-29 Score=259.27 Aligned_cols=213 Identities=19% Similarity=0.219 Sum_probs=132.1
Q ss_pred cccceeeeeeccCCceEEEeccC------------CCcEEEEEcCCcccccCCCChhHHHHHHH-HHHHHHHhcCCCCCC
Q psy4509 92 LGSSTACIVILNKETSTLCTANI------------GNSIVRVADGVGGWRNYGIDPGEFSSFLM-KTCERLVTSGRFSCT 158 (369)
Q Consensus 92 ~G~st~~~~r~~neD~~~~~~~~------------g~~~faVaDGvGG~~~~g~~a~~~a~~l~-~~~~~~~~~~~~~~~ 158 (369)
.+.+..+.+|.+|||++.+..+. +..+|+|||||||+.. |++|+.++ +.+.+++.+......
T Consensus 378 a~~Td~G~~R~~NEDa~~i~~~~~~~~~~~~~~~~~~~L~aVaDGmGGh~~-----GevAS~lAv~~L~~~~~~~~~~~~ 452 (645)
T PRK14559 378 AGRTDVGRQRHHNEDYFGINTRIQKLENPHGRIVQARGLYILCDGMGGHAA-----GEVASALAVETLQQYFQQHWQDEL 452 (645)
T ss_pred EEECCCCCCCcccCCcccccccccccccccccccccceEEEEEeCCCCchh-----HHHHHHHHHHHHHHHHHhhhcccc
Confidence 45555666899999998765321 2358999999999764 44444432 333343332111111
Q ss_pred C----HHHHHHHHHHHHHHcc---C--CC-CCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEe
Q psy4509 159 E----PTSLLARSYYELLENK---Q--PI-LGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANI 228 (369)
Q Consensus 159 ~----~~~~L~~a~~~~~~~~---~--~~-~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanv 228 (369)
. ..+++..|+..+.+.. . .. ..|||++ ++++. ++++|++||
T Consensus 453 ~~~~~L~~ai~~AN~~I~~~~~~~~~~~~~~MGTTlv---------------------------~alI~--~~~l~ianV 503 (645)
T PRK14559 453 PDEETIREAIYLANEAIYDLNQQNARSGSGRMGTTLV---------------------------MALVQ--DTQVAVAHV 503 (645)
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhcccccCCCCCceee---------------------------eEEEE--CCEEEEEEe
Confidence 2 3334444444443211 1 11 2345554 44554 689999999
Q ss_pred cCCceEEE-ECCeEEEeCcccccccCCcccccCCCC---CC-CCCcc-----------ccceeeee-ecCCCEEEEeccC
Q psy4509 229 GDSGFVIV-RRGKVIHRSEEQQHYFNTPFQLSLPPL---SH-TTQVL-----------ESCKRRGL-VVHGDVILLATDG 291 (369)
Q Consensus 229 GDSr~yl~-R~g~i~~lT~dq~h~~~~p~ql~~~~~---~~-~~~vl-----------~~~d~~~~-l~~gD~llLaSDG 291 (369)
||||+|++ |+|+++++|+||+.. +...+.|..+. .. .++.+ .+|++..+ +++||+|||||||
T Consensus 504 GDSRaYli~r~g~l~QLT~DHs~~-~~lv~~Gi~~~~a~~~p~~~~LTrALG~~~~~~l~Pdi~~~~L~~gD~lLLCSDG 582 (645)
T PRK14559 504 GDSRLYRVTRKGGLEQLTVDHEVG-QREIQRGVEPQIAYARPDAYQLTQALGPRDNSAIQPDIQFLEIEEDTLLLLCSDG 582 (645)
T ss_pred cCceEEEEecCCeEEEeCCCCCHH-HHHHHhCCCHHHHhcCcccceeeeccCCCCCCcccceEEEEEcCCCCEEEEECCC
Confidence 99999998 578999999996431 11111111000 00 01111 25788888 9999999999999
Q ss_pred CCCC--CCh---HHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEE
Q psy4509 292 VFDN--VPD---SLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLAI 366 (369)
Q Consensus 292 l~D~--l~~---~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~ 366 (369)
|||+ +.+ +++..++... .+++++|++|++.|+++ |..|||||||+.
T Consensus 583 L~D~~~ve~~~~~~l~~il~~~------~~l~~aa~~Li~~Al~~-----------------------gg~DNITvIvV~ 633 (645)
T PRK14559 583 LSDNDLLETHWQTHLLPLLSSS------ANLDQGLNKLIDLANQY-----------------------NGHDNITAILVR 633 (645)
T ss_pred CCCCcccchHHHHHHHHHHhcC------CCHHHHHHHHHHHHHHc-----------------------CCCCcEEEEEEE
Confidence 9995 443 3344444432 47899999999999874 667999999998
Q ss_pred Ee
Q psy4509 367 VA 368 (369)
Q Consensus 367 v~ 368 (369)
+.
T Consensus 634 l~ 635 (645)
T PRK14559 634 LK 635 (645)
T ss_pred ec
Confidence 73
No 7
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=99.96 E-value=6.8e-28 Score=225.44 Aligned_cols=211 Identities=21% Similarity=0.264 Sum_probs=143.4
Q ss_pred ceeeeeeccCCceEEEecc--CCCcEEEEEcCCcccccCCCChhHHHHHHH-HHHHHHHhcCCCCCCCHHHHHHHHHHHH
Q psy4509 95 STACIVILNKETSTLCTAN--IGNSIVRVADGVGGWRNYGIDPGEFSSFLM-KTCERLVTSGRFSCTEPTSLLARSYYEL 171 (369)
Q Consensus 95 st~~~~r~~neD~~~~~~~--~g~~~faVaDGvGG~~~~g~~a~~~a~~l~-~~~~~~~~~~~~~~~~~~~~L~~a~~~~ 171 (369)
++....|..|||++.+..+ .+..+|+|||||||.. ++.++...+ +.+.+...........+.++|++++..+
T Consensus 11 ~~~~~~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 85 (255)
T smart00332 11 SSMQGVRKPMEDAHVITPDLSDSGAFFGVFDGHGGSE-----AAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKT 85 (255)
T ss_pred ecCCCCCCCCcceEEEeccCCCCeEEEEEEeCCCcHH-----HHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHH
Confidence 4455788999999988776 4456999999999843 456655544 3222221111101134777788888766
Q ss_pred HHcc----C----CCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEEE
Q psy4509 172 LENK----Q----PILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIH 243 (369)
Q Consensus 172 ~~~~----~----~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~ 243 (369)
.+.- . ....+||++ ++++. .+++|++|+||||+|++|++++.+
T Consensus 86 ~~~~~~~~~~~~~~~~~gtT~~---------------------------~~~~~--~~~l~~~~vGDsr~y~~~~~~~~~ 136 (255)
T smart00332 86 DEEILEELESLEEDAGSGSTAV---------------------------VALIS--GNKLYVANVGDSRAVLCRNGKAVQ 136 (255)
T ss_pred HHHHHHhhhhccCCCCCCccEE---------------------------EEEEE--CCEEEEEeccCceEEEEeCCceeE
Confidence 4321 1 123456655 45565 679999999999999999999999
Q ss_pred eCcccccc-------------------cCCcccccCCCCCC--CCCccccceeeee-e-cCCCEEEEeccCCCCCCChHH
Q psy4509 244 RSEEQQHY-------------------FNTPFQLSLPPLSH--TTQVLESCKRRGL-V-VHGDVILLATDGVFDNVPDSL 300 (369)
Q Consensus 244 lT~dq~h~-------------------~~~p~ql~~~~~~~--~~~vl~~~d~~~~-l-~~gD~llLaSDGl~D~l~~~e 300 (369)
+|+||.+. .+....+....-.. ...+...|++... + ++||+||||||||||++++++
T Consensus 137 lt~dh~~~~~~~~~~i~~~~~~~~~~~~~~~~~lt~~~g~~~~~~~i~~~p~~~~~~~~~~~d~ill~SDGv~~~l~~~~ 216 (255)
T smart00332 137 LTEDHKPSNEDERARIEAAGGFVINGRVNGVLALSRAIGDFFLKPYVSAEPDVTVVELTEKDDFLILASDGLWDVLSNQE 216 (255)
T ss_pred cCCCCCCcCHHHHHHHHHcCCEEECCeECCeEecccccCCHhhcCCeEeeeEEEEEEecCCCcEEEEECCccccCCCHHH
Confidence 99996541 11101111100000 0112356777777 6 999999999999999999999
Q ss_pred HHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEE
Q psy4509 301 LLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLLA 365 (369)
Q Consensus 301 i~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~ 365 (369)
|.+++...... .+++++|+.|++.|... |+.|||||||+
T Consensus 217 i~~~~~~~~~~---~~~~~~~~~l~~~a~~~-----------------------~~~Dn~T~ivv 255 (255)
T smart00332 217 VVDIVRKHLSK---SDPEEAAKRLIDLALAR-----------------------GSKDNITVIVV 255 (255)
T ss_pred HHHHHHHHhhc---CCHHHHHHHHHHHHHHc-----------------------CCCCCeEEEEC
Confidence 99999876310 25899999999999863 78899999985
No 8
>KOG0698|consensus
Probab=99.95 E-value=8.5e-27 Score=228.76 Aligned_cols=217 Identities=19% Similarity=0.228 Sum_probs=151.6
Q ss_pred ccccceeeeeeccCCceEEEeccC------C---CcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCC--CC
Q psy4509 91 ILGSSTACIVILNKETSTLCTANI------G---NSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSC--TE 159 (369)
Q Consensus 91 ~~G~st~~~~r~~neD~~~~~~~~------g---~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~--~~ 159 (369)
..+.++.+..|..+||.+....+. + ..||||||||||. .+++|++..++.. +..+..+.. ..
T Consensus 41 ~~~~~~~~~~r~~med~~~~~~~~~~~~~~~~~~~~ffgVfDGHGG~-----~~A~~~~~~L~~~--l~~~~~~~~~~~~ 113 (330)
T KOG0698|consen 41 LGSLLSIRGRRRKMEDRHVQLPDFLEEDVGGEQDTAFFGVFDGHGGD-----LAAKFAAKHLHKN--LLEQLAFPKDRQD 113 (330)
T ss_pred ceEEEecCCCCCccCcceeecccccccccCCCCceEEEEEEeCCCCH-----HHHHHHHHHHHHH--HHhhhhcccchHH
Confidence 334456777788899999876652 2 2599999999984 4688887555332 222222222 24
Q ss_pred HHHHHHHHHH-HHHHcc-----CCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCce
Q psy4509 160 PTSLLARSYY-ELLENK-----QPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGF 233 (369)
Q Consensus 160 ~~~~L~~a~~-~~~~~~-----~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~ 233 (369)
..++++++|. .+++.- ....+||||++ +++. .++.||+||+||||+
T Consensus 114 ~~~a~~~~F~~~~D~~~~~~~~~~~~~gstav~---------------------------~vi~-~~~~l~vaN~GDSRa 165 (330)
T KOG0698|consen 114 VKDALRRAFLTKTDSEFLEKREDNRSGGSTAVV---------------------------ALIK-KGRKLYVANVGDSRA 165 (330)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCcceeee---------------------------eeEe-cCCEEEEEEcCCCcE
Confidence 7889999999 475431 13567788774 3333 245999999999999
Q ss_pred EEEECC-eEEEeCcccccccC---------------C---cccccCCCCCC-------C-CCccccceeeee-ecC-CCE
Q psy4509 234 VIVRRG-KVIHRSEEQQHYFN---------------T---PFQLSLPPLSH-------T-TQVLESCKRRGL-VVH-GDV 284 (369)
Q Consensus 234 yl~R~g-~i~~lT~dq~h~~~---------------~---p~ql~~~~~~~-------~-~~vl~~~d~~~~-l~~-gD~ 284 (369)
++.|+| +.++||.||+.... . +...|.+.... . ..++.+||+... +.+ ++|
T Consensus 166 Vl~~~~~~a~~Ls~DHkP~~~~E~~RI~~~GG~v~~~~~~~Rv~G~LavsRa~GD~~~k~~~v~a~Pei~~~~~~~~deF 245 (330)
T KOG0698|consen 166 VLSRKGGVAVQLSVDHKPDREDERERIEAAGGRVSNWGGVWRVNGVLAVSRAFGDVELKSQGVIAEPEIQQVKINSDDEF 245 (330)
T ss_pred EEecCCCeeeeCCCCCCCCcHHHHHHHHHcCCEEEEcCCcceEeceEEEeeecCCHHhcCCcEecCCceEEEEcCCCCcE
Confidence 999866 89999999754210 0 11111111100 0 124478998877 665 779
Q ss_pred EEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceEEEE
Q psy4509 285 ILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDITVLL 364 (369)
Q Consensus 285 llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv 364 (369)
|||+||||||+|++||++++++... .....+..++..|...|..+ |+.|||||||
T Consensus 246 LiLasDGiwDv~s~qeav~~V~~~~--~~~~~~~~a~~~l~~~a~~~-----------------------~s~Dnitvvv 300 (330)
T KOG0698|consen 246 LILASDGIWDVVSNQEAVDLVRDEL--ASISSPLAAAKLLATEALSR-----------------------GSKDNITVVV 300 (330)
T ss_pred EEEeCCchhcccChHHHHHHHHHHh--hccccHHHHHHHHHHHHhhc-----------------------CCCCCeEEEE
Confidence 9999999999999999999999842 12247899999999999864 8889999999
Q ss_pred EEE
Q psy4509 365 AIV 367 (369)
Q Consensus 365 ~~v 367 (369)
+.+
T Consensus 301 V~l 303 (330)
T KOG0698|consen 301 VRL 303 (330)
T ss_pred EEe
Confidence 986
No 9
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 2I0O_A 2POP_C 2POM_A 2J4O_A 2I44_B 3MQ3_A 3N3C_A 2PNQ_B 2P8E_A 2IQ1_A ....
Probab=99.94 E-value=1.1e-27 Score=226.40 Aligned_cols=199 Identities=21% Similarity=0.281 Sum_probs=135.1
Q ss_pred ccceeeeeeccCCceEEEeccCC-------CcEEEEEcCCcccccCCCChhHHHHHHHHHH-HHHHhcCCCCCCCHHHHH
Q psy4509 93 GSSTACIVILNKETSTLCTANIG-------NSIVRVADGVGGWRNYGIDPGEFSSFLMKTC-ERLVTSGRFSCTEPTSLL 164 (369)
Q Consensus 93 G~st~~~~r~~neD~~~~~~~~g-------~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~-~~~~~~~~~~~~~~~~~L 164 (369)
|.++.+.+|..+||.+++..++. ..+|+|||||||+. ++.|++..+... .+..... ....+.++|
T Consensus 3 ~~~~~~g~r~~~eD~~~~~~~~~~~~~~~~~~l~~V~DGhgG~~-----~a~~~~~~l~~~l~~~~~~~--~~~~~~~al 75 (254)
T PF00481_consen 3 GVSSMQGVRKEMEDRHLIIQNFNSNSGNDNVSLFGVFDGHGGSE-----AAEYASQNLPEFLKENLSFN--DGNDIEEAL 75 (254)
T ss_dssp EEEEEECTSSSHHEEEEEEEEETCCTTEEEEEEEEEEEEESSSH-----HHHHHHHHHHHHHHHHHHHH--TCHHHHHHH
T ss_pred CeecCCCCCCcccCEEEEecCccccCCCCCcEEEEEecCCCChh-----hHHHHHHHHHHHHHhhcccc--cccchhhcc
Confidence 66788899999999999877542 25999999999954 577776665432 2222111 111678888
Q ss_pred HHHHHH-HHHc------c-CCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEE
Q psy4509 165 ARSYYE-LLEN------K-QPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIV 236 (369)
Q Consensus 165 ~~a~~~-~~~~------~-~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~ 236 (369)
..+|.. +.+. . .....|||++ ++++. +++||+||+||||+|++
T Consensus 76 ~~a~~~~~~~~~~~~~~~~~~~~~GsTa~---------------------------v~li~--~~~l~vanvGDSravl~ 126 (254)
T PF00481_consen 76 RQAFLAFTDESLYSDSENNESSKSGSTAT---------------------------VALID--GNKLYVANVGDSRAVLC 126 (254)
T ss_dssp HHHHHHHHHHHHHHHHHHHTHTTSEEEEE---------------------------EEEEE--TTEEEEEEESS-EEEEE
T ss_pred cceeeeccccccccccccccccccccccc---------------------------ccccc--cceeEEEeeeeeeeeee
Confidence 888888 5321 1 3455677777 44564 67899999999999999
Q ss_pred ECCeEE-EeCcccccccCCccc-----------------ccCCCCCC-------C----CCccccceeeee-ecCCC-EE
Q psy4509 237 RRGKVI-HRSEEQQHYFNTPFQ-----------------LSLPPLSH-------T----TQVLESCKRRGL-VVHGD-VI 285 (369)
Q Consensus 237 R~g~i~-~lT~dq~h~~~~p~q-----------------l~~~~~~~-------~----~~vl~~~d~~~~-l~~gD-~l 285 (369)
|++... ++|+||... .|.+ .+.+.... . ..++.+|++..+ +.++| +|
T Consensus 127 ~~~~~~~~Lt~dH~~~--~~~E~~RI~~~gg~v~~~~rv~g~l~~sRalGd~~~k~~~~~~v~~~P~i~~~~l~~~d~fl 204 (254)
T PF00481_consen 127 RNGGIIKQLTRDHKPS--NPDERERIRKAGGRVSENGRVNGVLAVSRALGDFDLKPPGKPGVIAEPDISEVDLTPDDEFL 204 (254)
T ss_dssp ETTEEEEESS---STT--SHHHHHHHHHTT-GEEETEEETTTBSSSB-EE-GGGTTCTSSSSB---EEEEEEEBTTEEEE
T ss_pred eccccccccccccccc--hhhccceeeccccccccchhhhhccccccccccccccccccceeeeecccccccccccceEE
Confidence 999888 999996432 1110 01111000 0 134577999998 98886 89
Q ss_pred EEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHh
Q psy4509 286 LLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTL 331 (369)
Q Consensus 286 lLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~ 331 (369)
|||||||||+|+++|+++++.+.. .....|+.+|+.|++.|+++
T Consensus 205 vlaSDGlwd~l~~~ei~~~v~~~~--~~~~~~~~~a~~L~~~A~~~ 248 (254)
T PF00481_consen 205 VLASDGLWDVLSNEEIVDIVRESL--NSGRSPQEAAEKLVDEAIAR 248 (254)
T ss_dssp EEE-HHHHTTSHHHHHHHHHHHHH--HHHSHHHHHHHHHHHHHHHT
T ss_pred EEEcccccccCCHHHHHHHHHHHH--hcCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999998874 00114999999999999985
No 10
>KOG0697|consensus
Probab=99.94 E-value=7.9e-27 Score=216.51 Aligned_cols=219 Identities=19% Similarity=0.212 Sum_probs=150.1
Q ss_pred ccccceeeeeeccCCceEEEeccC-----CCcEEEEEcCCcccccCCCChhHHHHHHHHHHHH--HHhcCC--CCCCCHH
Q psy4509 91 ILGSSTACIVILNKETSTLCTANI-----GNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCER--LVTSGR--FSCTEPT 161 (369)
Q Consensus 91 ~~G~st~~~~r~~neD~~~~~~~~-----g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~--~~~~~~--~~~~~~~ 161 (369)
..|-|.+.++|+.+||+|...+-+ ..+||||||||.|.+. +..-+..|++++.. -+.... ..-...+
T Consensus 23 ryg~SSMQGWR~eMEDah~A~~~l~~~l~dWSfFAVfDGHAGs~v----a~~c~~hLlehi~sse~F~~~~k~gsv~~~~ 98 (379)
T KOG0697|consen 23 RYGVSSMQGWRVEMEDAHTAVAGLPSPLEDWSFFAVFDGHAGSQV----ANHCAEHLLEHIISSEEFRGMTKNGSVENVE 98 (379)
T ss_pred eeeeccccchhhhhhhhhhhhhcCCCCccCceEEEEEcCccchHH----HHHHHHHHHHHhhhhHHHhhhccCCcHHHHH
Confidence 468899999999999999876544 3479999999999764 23334556655421 111100 0112344
Q ss_pred HHHHHHHHHHHHc--------cCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCce
Q psy4509 162 SLLARSYYELLEN--------KQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGF 233 (369)
Q Consensus 162 ~~L~~a~~~~~~~--------~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~ 233 (369)
.-++..|.++++. +....+||||++ +++. ...+|++|+||||+
T Consensus 99 ~GIrtGFL~iDE~mr~~~~~~~~~drsGsTAVc---------------------------v~vs--p~h~y~~NcGDSRa 149 (379)
T KOG0697|consen 99 KGIRTGFLSIDEIMRTLSDISKGSDRSGSTAVC---------------------------VFVS--PTHIYIINCGDSRA 149 (379)
T ss_pred hhHhhcceeHHHHHhhhhhhhcccccCCceEEE---------------------------EEec--CceEEEEecCcchh
Confidence 4566666666442 122347888884 3443 46899999999999
Q ss_pred EEEECCeEEEeCcccccccCCc---cc-----------ccCCCCCC----------C------CCccccceeeee--ecC
Q psy4509 234 VIVRRGKVIHRSEEQQHYFNTP---FQ-----------LSLPPLSH----------T------TQVLESCKRRGL--VVH 281 (369)
Q Consensus 234 yl~R~g~i~~lT~dq~h~~~~p---~q-----------l~~~~~~~----------~------~~vl~~~d~~~~--l~~ 281 (369)
+++|+|+++.-|.||+...-.. .| .|.+..+. + .-|..+||+... -++
T Consensus 150 vl~rng~~~f~TqDHKP~~p~EkeRIqnAGGSVMIqRvNGsLAVSRAlGDydyK~v~~kgp~eQlVSPEPev~~~~R~ee 229 (379)
T KOG0697|consen 150 VLCRNGEVVFSTQDHKPYLPKEKERIQNAGGSVMIQRVNGSLAVSRALGDYDYKNVPGKGPTEQLVSPEPEVYIIERSEE 229 (379)
T ss_pred heecCCceEEeccCCCCCChHHHHHHhcCCCeEEEEEecceeeeehhccCcccccCCCCCchhcccCCCCceEEeecccc
Confidence 9999999999999976443100 01 01111000 0 013356887766 677
Q ss_pred CCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCCCCCceE
Q psy4509 282 GDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQGGKPDDIT 361 (369)
Q Consensus 282 gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gGk~DDIT 361 (369)
+|||+|||||+||+|+++|++++++.... -..++.++|+..++..+-. |++||+|
T Consensus 230 deFivlACDGIwDVMtneelcefv~sRl~--Vt~dL~~vcn~VvDtCLhK-----------------------GSRDNMs 284 (379)
T KOG0697|consen 230 DEFIVLACDGIWDVMTNEELCEFVKSRLE--VTSDLEEVCNDVVDTCLHK-----------------------GSRDNMS 284 (379)
T ss_pred CcEEEEEccchhhhcccHHHHHHHHhhhe--ecccHHHHHHHHHHHHHhc-----------------------cCccCce
Confidence 88999999999999999999999987541 2347999999999999853 9999999
Q ss_pred EEEEEE
Q psy4509 362 VLLAIV 367 (369)
Q Consensus 362 Vvv~~v 367 (369)
+|++..
T Consensus 285 ivlvcf 290 (379)
T KOG0697|consen 285 IVLVCF 290 (379)
T ss_pred EEEEec
Confidence 999864
No 11
>KOG1323|consensus
Probab=99.80 E-value=5.8e-19 Score=167.81 Aligned_cols=79 Identities=28% Similarity=0.316 Sum_probs=58.4
Q ss_pred ecCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchH---HHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCCC
Q psy4509 279 VVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQL---QLVANTIALMARTLAFDETYMSPFAIQARANGISTQGG 355 (369)
Q Consensus 279 l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~---~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~gG 355 (369)
...+|++||+||||||+++++|+..++.......++.+| -.+|+.|+..|+-...|.. .|-+|- .-|
T Consensus 405 ~~~DdVvilatDGLWDVlSneeva~~Vrs~L~~~dp~Dp~RYt~aaqdlva~arg~~k~rg--------Wr~~n~--~lg 474 (493)
T KOG1323|consen 405 HLTDDVVILATDGLWDVLSNEEVALIVRSFLPSTDPADPSRYTQAAQDLVAAARGQQKDRG--------WRMNNG--GLG 474 (493)
T ss_pred cCCCcEEEEecCchhhhcccHHHHHHHHHhcCCCCCCChhHHHHHHHHHHHHhcCccCCCc--------eeccCC--CcC
Confidence 457899999999999999999999999988765554444 5678889988876543322 232221 237
Q ss_pred CCCceEEEEEEE
Q psy4509 356 KPDDITVLLAIV 367 (369)
Q Consensus 356 k~DDITVvv~~v 367 (369)
+-|||||.|+-+
T Consensus 475 SgDDIsVfVIPL 486 (493)
T KOG1323|consen 475 SGDDISVFVIPL 486 (493)
T ss_pred CCCceEEEEEec
Confidence 889999999854
No 12
>KOG0699|consensus
Probab=99.80 E-value=1.1e-18 Score=167.44 Aligned_cols=139 Identities=19% Similarity=0.243 Sum_probs=99.7
Q ss_pred cCceeEEEEecCCCceEEEEecCCceEEEECCeEEEeCccccccc--------CCccc-------ccCCCCCC-------
Q psy4509 208 SSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYF--------NTPFQ-------LSLPPLSH------- 265 (369)
Q Consensus 208 ~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h~~--------~~p~q-------l~~~~~~~------- 265 (369)
+.|+||.++. +++|||||.|||||++.|+|+.+-+|.||+..- +.--| .|.+..+.
T Consensus 331 GtTAvVcLv~--g~~liVANAGDSRcV~sr~GkAvdmS~DHKPEDevE~~RI~~AGG~vtlDGRVNGGLNLSRA~GDHaY 408 (542)
T KOG0699|consen 331 GTTAVVCLVG--GDKLIVANAGDSRCVLSRNGKAVDMSVDHKPEDEVETNRIHAAGGQVTLDGRVNGGLNLSRAFGDHAY 408 (542)
T ss_pred CceEEEEEec--CceEEEecCCCcceEEecCCceeecccCCCcccHHHHHHHHhcCCeEeecceecCccchhhhhhhhhh
Confidence 6777787774 789999999999999999999999999975310 00000 00000000
Q ss_pred CCC--------cc-ccceeeee-ecC-CCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccC
Q psy4509 266 TTQ--------VL-ESCKRRGL-VVH-GDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFD 334 (369)
Q Consensus 266 ~~~--------vl-~~~d~~~~-l~~-gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d 334 (369)
.++ ++ .-||+... |.+ +.|++++|||||++|+.+|++++++... .++..+..+|+.|++..+.-+.+
T Consensus 409 K~N~~Lp~eEQMIsALPDiK~l~lTpedEFmVvACDGIWN~MsSqeVVdFvr~~l--~~n~~ls~iceeL~D~CLAp~T~ 486 (542)
T KOG0699|consen 409 KKNQELPLEEQMISALPDIKILALTPEDEFMVVACDGIWNSMSSQEVVDFVRDLL--AKNSSLSEICEELCDACLAPSTD 486 (542)
T ss_pred hcccCCChHHHHhhhcccceeEeecCcccEEEEEccchhhhccHHHHHHHHHHHH--hcCchHHHHHHHHHHhhcCCCCC
Confidence 001 12 45888877 665 5599999999999999999999998765 24467899999999999864322
Q ss_pred CCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509 335 ETYMSPFAIQARANGISTQGGKPDDITVLLAIV 367 (369)
Q Consensus 335 ~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v 367 (369)
-.|-.-||+|||++.+
T Consensus 487 -----------------GDGTGCDNMT~ii~~F 502 (542)
T KOG0699|consen 487 -----------------GDGTGCDNMTVIITTF 502 (542)
T ss_pred -----------------CCCcCCCcceEEEEEe
Confidence 1244569999999875
No 13
>KOG0700|consensus
Probab=99.80 E-value=9.2e-19 Score=171.13 Aligned_cols=115 Identities=17% Similarity=0.204 Sum_probs=78.9
Q ss_pred EEEEecCCCceEEEEecCCceEEEE---CC---eEEEeCccccccc---------CCc-----------ccccCCCCC--
Q psy4509 213 IVILNKETSTLYTANIGDSGFVIVR---RG---KVIHRSEEQQHYF---------NTP-----------FQLSLPPLS-- 264 (369)
Q Consensus 213 v~~l~~~~~~l~vanvGDSr~yl~R---~g---~i~~lT~dq~h~~---------~~p-----------~ql~~~~~~-- 264 (369)
+..+. ++.|||||+||||++|-+ +| ..+|||.||.-.. .+| .-+|.+.+.
T Consensus 207 v~~i~--~~~LyVaN~GDSRAVLG~~~~~~~~~~A~qLS~dHn~~ne~Ev~Rir~eHPdd~~~vv~~~~RvkG~L~vsRA 284 (390)
T KOG0700|consen 207 VGLIK--GGDLYVANVGDSRAVLGVVENNGSWLVAVQLSTDHNASNEDEVRRIRSEHPDDPHIVVNKHWRVKGILQVSRA 284 (390)
T ss_pred EEEEe--CCeEEEEecCcchhhhceecCCCCeEEEEecChhhccccHHHHHHHHHhCCCCcceEeeccceeeEEEEeeee
Confidence 55665 789999999999999955 34 4678999973211 011 111111110
Q ss_pred --------------------------CCCCccccceeeee-ecCCC-EEEEeccCCCCCCChHHHHHHHHhhhCCCCCch
Q psy4509 265 --------------------------HTTQVLESCKRRGL-VVHGD-VILLATDGVFDNVPDSLLLAELVRAQGSKDPMQ 316 (369)
Q Consensus 265 --------------------------~~~~vl~~~d~~~~-l~~gD-~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~ 316 (369)
.+..+-.+|.+... |.+.| |+||+||||||.|++||+++++....... ..
T Consensus 285 fGd~~lK~~~~n~e~l~~~fr~~~~~t~PyltaeP~i~~HrL~p~DkFLIlASDGLwE~lsNeeaV~lV~~~i~~~--~p 362 (390)
T KOG0700|consen 285 FGDGYLKWPEFNQEPLLEKFRIPYIGTPPYLTAEPSITHHKLTPNDKFLILASDGLWEYLSNEEAVSLVHEFISGK--FP 362 (390)
T ss_pred ccceeecchhhccchhHhhcCCCCCCCCCceeccceEEEEEcCCCCeEEEEeccchhhhcChHHHHHHHHHhhccC--CC
Confidence 00112267888888 88877 79999999999999999999999864110 12
Q ss_pred HHHHHHHHHHHHHHh
Q psy4509 317 LQLVANTIALMARTL 331 (369)
Q Consensus 317 ~~~~A~~Lv~~A~~~ 331 (369)
-+.+|+.|++.|+..
T Consensus 363 d~~~A~hLIr~aL~~ 377 (390)
T KOG0700|consen 363 DGNPATHLIRHALGR 377 (390)
T ss_pred CCCHHHHHHHHHHhh
Confidence 356899999999875
No 14
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases.
Probab=99.79 E-value=9.4e-18 Score=151.38 Aligned_cols=173 Identities=21% Similarity=0.168 Sum_probs=122.3
Q ss_pred CCceEEEeccC-CCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHccCCCCCCc
Q psy4509 104 KETSTLCTANI-GNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSS 182 (369)
Q Consensus 104 neD~~~~~~~~-g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~~g~s 182 (369)
..|.+.+.... +..+++|+||||+ |..++.++..++..+.+.+.. ...+.++++..++.+.... ....++
T Consensus 17 ~GD~~~~~~~~~~~~~~~v~Dg~G~----G~~aa~~s~~~~~~~~~~~~~----~~~~~~~l~~~n~~l~~~~-~~~~~~ 87 (193)
T smart00331 17 GGDFYDVVKLPEGRLLIAIADVMGK----GLAAALAMSMARSALRTLLSE----GISLSQILERLNRAIYENG-EDGMFA 87 (193)
T ss_pred CccEEEEEEeCCCeEEEEEEecCCC----ChHHHHHHHHHHHHHHHHhhc----CCCHHHHHHHHHHHHHhcC-CCCcEE
Confidence 46877776654 3568999999997 455666676666655555433 2468888888777765431 222345
Q ss_pred ceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEE-CCeEEEeCcccccccCCcccccCC
Q psy4509 183 TTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVR-RGKVIHRSEEQQHYFNTPFQLSLP 261 (369)
Q Consensus 183 Ta~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R-~g~i~~lT~dq~h~~~~p~ql~~~ 261 (369)
|++ ++.++..+++++++|+||+|+|++| +|..++.+.+. ...+|..
T Consensus 88 T~~---------------------------~~~id~~~~~l~~~~~Gd~~~~~~~~~~~~~~~~~~~------~~~lG~~ 134 (193)
T smart00331 88 TLF---------------------------LALYDFAGGTLSYANAGHSPPYLLRADGGLVEDLDDL------GAPLGLE 134 (193)
T ss_pred EEE---------------------------EEEEECCCCEEEEEeCCCCceEEEECCCCeEEEcCCC------CceeeeC
Confidence 655 4566656889999999999999999 66666666541 1223322
Q ss_pred CCCCCCCccccceeeee-ecCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHH
Q psy4509 262 PLSHTTQVLESCKRRGL-VVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMAR 329 (369)
Q Consensus 262 ~~~~~~~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~ 329 (369)
+. .+++...+ +++||+|+|+||||||.++++++.+++.+.. ..++++++++|.+.+.
T Consensus 135 ~~-------~~~~~~~~~l~~gd~l~l~TDGl~e~~~~~~l~~~l~~~~----~~~~~~~~~~i~~~~~ 192 (193)
T smart00331 135 PD-------VEVDVRELTLEPGDLLLLYTDGLTEARNPERLEELLEELL----GSPPAEIAQRILEELL 192 (193)
T ss_pred CC-------CcceeEEEeeCCCCEEEEECCCccccCChHHHHHHHHHhc----CCCHHHHHHHHHHHHh
Confidence 21 23456677 9999999999999999999999999998863 3468888998888764
No 15
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=99.74 E-value=1.5e-16 Score=171.55 Aligned_cols=192 Identities=22% Similarity=0.239 Sum_probs=133.3
Q ss_pred ccCCceEEEeccC-CCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHccCCCCC
Q psy4509 102 LNKETSTLCTANI-GNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILG 180 (369)
Q Consensus 102 ~~neD~~~~~~~~-g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~~g 180 (369)
..++|.+.+.... |...++|+||||+ |..|+..+...++.+++++..+ .+|.++++..+..+...... ..
T Consensus 565 ~vsGD~y~~~~l~~g~~~~~laDGmGh----G~~Aa~~S~~~~~ll~~~~~~g----~~~~~ai~~lN~~L~~~~~~-~~ 635 (764)
T TIGR02865 565 LVSGDSYSFGKLSAGKYAVAISDGMGS----GPEAAQESSACVRLLEKFLESG----FDREVAIKTVNSILSLRSTD-EK 635 (764)
T ss_pred cccCceEEEEEECCCEEEEEEEcccCC----CHHHHHHHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHhCCCC-Ce
Confidence 4568988776533 4457899999997 5667766666555555555432 35777777777665332111 11
Q ss_pred CcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeEEEeCcccccccCCcccccC
Q psy4509 181 SSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQLSL 260 (369)
Q Consensus 181 ~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h~~~~p~ql~~ 260 (369)
.+|+. ++.+|..++++.++|+|+++.|+.|+|++..++.. +.| +|.
T Consensus 636 faTl~---------------------------l~~IDl~~g~~~~~~aG~~p~~i~r~~~v~~i~s~-----~lP--lGi 681 (764)
T TIGR02865 636 FSTLD---------------------------LSVIDLYTGQAEFVKVGAVPSFIKRGAKVEVIRSS-----NLP--IGI 681 (764)
T ss_pred EEEEE---------------------------EEEEECCCCeEEEEecCCCceEEEECCEEEEecCC-----Cce--eEe
Confidence 24433 66788788999999999999999999988877542 112 222
Q ss_pred CCCCCCCCccccceeeee-ecCCCEEEEeccCCCCCCChHH-----HHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccC
Q psy4509 261 PPLSHTTQVLESCKRRGL-VVHGDVILLATDGVFDNVPDSL-----LLAELVRAQGSKDPMQLQLVANTIALMARTLAFD 334 (369)
Q Consensus 261 ~~~~~~~~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~e-----i~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d 334 (369)
.+. .+++..+. +++||+|+|+||||+|..++++ +.+++.+.. ..+|+++++.|+++|++.+
T Consensus 682 l~~-------~~~~~~~~~L~~GD~Lll~SDGv~E~~~~~~~~~~~l~~~l~~~~----~~~p~ela~~Il~~a~~~~-- 748 (764)
T TIGR02865 682 LDE-------VDVELVRKKLKNGDLIVMVSDGVLEGEKEVEGKVLWLVRKLKETN----TNDPEEIAEYLLEKAKELR-- 748 (764)
T ss_pred ccC-------CccceEEEEeCCCCEEEEECCCCCcCCcccccHHHHHHHHHHhcC----CCCHHHHHHHHHHHHHHhc--
Confidence 211 23455677 9999999999999999887543 666666542 3579999999999998752
Q ss_pred CCCCChHHHHHHhCCCCCCCCCCCceEEEEEEE
Q psy4509 335 ETYMSPFAIQARANGISTQGGKPDDITVLLAIV 367 (369)
Q Consensus 335 ~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v 367 (369)
.|...||+||++++|
T Consensus 749 ------------------~~~~~DD~Tvlvirv 763 (764)
T TIGR02865 749 ------------------SGKIKDDMTVIVAKV 763 (764)
T ss_pred ------------------CCCCCCCeEEEEEEe
Confidence 123589999999986
No 16
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=99.74 E-value=3.6e-16 Score=140.56 Aligned_cols=178 Identities=25% Similarity=0.345 Sum_probs=121.3
Q ss_pred cEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHccCCCCCCcceeeeecccccccc
Q psy4509 117 SIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTTCIVILNKETSTL 196 (369)
Q Consensus 117 ~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~~g~sTa~va~L~~~~~~~ 196 (369)
.+++|+|++|. |+.|+.++..+...+..++... .+|.++++..++.+...........|++
T Consensus 5 ~~~~v~D~~Gh----G~~aa~~~~~~~~~~~~~~~~~----~~p~~~l~~ln~~l~~~~~~~~~~~t~~----------- 65 (193)
T PF07228_consen 5 YFIIVGDVSGH----GVSAALLSAALASAIRELLDEG----LDPEELLEALNRRLYRDLKGDNRYATAC----------- 65 (193)
T ss_dssp EEEEEEEESSS----SHHHHHHHHHHHHHHHHHHHTT----TSHHHHHHHHHHHHHHHTTTTSTTEEEE-----------
T ss_pred EEEEEEEecCC----CHHHHHHHHHHHHHHHHHHHcC----CCHHHHHHHHHHHHHHHhhhccccceEE-----------
Confidence 47889999995 6778888777766666555432 3599999998888844322211234555
Q ss_pred cccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEEC--CeEEEeCcccccccCCcccccCCCCCCCCCccccce
Q psy4509 197 YTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRR--GKVIHRSEEQQHYFNTPFQLSLPPLSHTTQVLESCK 274 (369)
Q Consensus 197 ~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~--g~i~~lT~dq~h~~~~p~ql~~~~~~~~~~vl~~~d 274 (369)
++.++..+++++++|+|+++++++|+ +....+... +.| +|..+. .+..
T Consensus 66 ----------------~~~~d~~~~~l~~~~aG~~~~l~~~~~~~~~~~~~~~-----~~~--lG~~~~-------~~~~ 115 (193)
T PF07228_consen 66 ----------------YAIIDPETGTLTYANAGHPPPLLLRPGGREIEQLESE-----GPP--LGIFED-------IDYQ 115 (193)
T ss_dssp ----------------EEEEETTTTEEEEEEESSSEEEEEETTCTEEEEETCS-----SBB--CSSSCT-------TCEE
T ss_pred ----------------EEEecccceEEEEeCCCCCCEEEEeccccceeecccC-----ccc--eeeecc-------cccc
Confidence 56788889999999999999999998 333333221 222 443321 2344
Q ss_pred eeee-ecCCCEEEEeccCCCCCCChH-------HHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHH
Q psy4509 275 RRGL-VVHGDVILLATDGVFDNVPDS-------LLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQAR 346 (369)
Q Consensus 275 ~~~~-l~~gD~llLaSDGl~D~l~~~-------ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~ 346 (369)
..++ +++||+|+|+||||+|+...+ ++.+++.+.. ..+++++++.|++.+.+.
T Consensus 116 ~~~~~l~~gd~l~l~TDGl~e~~~~~~~~~~~~~~~~~l~~~~----~~~~~~~~~~l~~~~~~~--------------- 176 (193)
T PF07228_consen 116 EQEIQLEPGDRLLLYTDGLFEALNEDGEFFGEERLLELLDENR----GLSPQEIIDALLEAIDRF--------------- 176 (193)
T ss_dssp EEEEE--TTEEEEEECHHHCTTTCHHCHHCCCHHHHHHHHCHT----TS-HHHHHHHHHHHHHHH---------------
T ss_pred ceEEEeccccEEEEeCCChhhccCCccchhHHHHHHHHHhhcc----CCCHHHHHHHHHHHHHHh---------------
Confidence 5567 999999999999999998543 3355565432 357999999999999863
Q ss_pred hCCCCCCCCCCCceEEEEEEE
Q psy4509 347 ANGISTQGGKPDDITVLLAIV 367 (369)
Q Consensus 347 ~~~~~~~gGk~DDITVvv~~v 367 (369)
..+...||||||++.+
T Consensus 177 -----~~~~~~DD~tvl~~~~ 192 (193)
T PF07228_consen 177 -----GKGPLRDDITVLVIRR 192 (193)
T ss_dssp -----TTSSTSS-EEEEEEEE
T ss_pred -----cCCCCCCceEEEEEEE
Confidence 1357899999999976
No 17
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B ....
Probab=99.74 E-value=2.4e-18 Score=157.53 Aligned_cols=170 Identities=21% Similarity=0.231 Sum_probs=86.7
Q ss_pred eccCCceEEEeccCCCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCC-C-HHHHHHHHHHHHH------
Q psy4509 101 ILNKETSTLCTANIGNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCT-E-PTSLLARSYYELL------ 172 (369)
Q Consensus 101 r~~neD~~~~~~~~g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~-~-~~~~L~~a~~~~~------ 172 (369)
+..|||++.+....+..+++|||||||+..++ ..|+.++..+.+.+........ . ..++++.+..++.
T Consensus 9 ~~~nqD~~~~~~~~~~~~~aVaDG~g~~~~~~----~aa~~av~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (212)
T PF13672_consen 9 GAPNQDAFGIRTDDDGNLAAVADGVGGSPYGE----EAAQLAVETFINYLKKLLSQESPSSIEALIRAIKKEILSIVRAF 84 (212)
T ss_dssp SSS--EEEEEE-TCCTCEEEEEEEESTTTHHH----HHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHH---
T ss_pred CCCCCCCEEeeeCCCCEEEEEEECCCCCchhH----HHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHhhhh
Confidence 46789999876666667889999999976432 2233344444444443221111 1 1223233222221
Q ss_pred -----HccCCCCCCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEE-EECCeEEEeCc
Q psy4509 173 -----ENKQPILGSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVI-VRRGKVIHRSE 246 (369)
Q Consensus 173 -----~~~~~~~g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl-~R~g~i~~lT~ 246 (369)
........+||++ ++++. +++++++|+||||+|+ .|+|++..++.
T Consensus 85 ~~~~~~~~~~~~~~tTl~---------------------------~~v~~--~~~~~~~~iGD~~i~~~~~~g~~~~l~~ 135 (212)
T PF13672_consen 85 QSAKQADLELRDYGTTLL---------------------------ALVID--PDKVYIFNIGDSRIYVIRRNGEIQQLTD 135 (212)
T ss_dssp -HHHHHSGGGTT-EE-EE---------------------------EEEEE--TTEEEEEEESS-EEEEEEETTEEEE-S-
T ss_pred hhhhhccccccccCceEE---------------------------EEEEE--CCEEEEEEECCCeEEEEECCCEEEEcCC
Confidence 1111112234433 44565 5789999999999965 57999999998
Q ss_pred ccccccCCcccccCCCCCCCCCccccceeeee-ecCCCEEEEeccCCCCCCChHH-HHHHHHhh
Q psy4509 247 EQQHYFNTPFQLSLPPLSHTTQVLESCKRRGL-VVHGDVILLATDGVFDNVPDSL-LLAELVRA 308 (369)
Q Consensus 247 dq~h~~~~p~ql~~~~~~~~~~vl~~~d~~~~-l~~gD~llLaSDGl~D~l~~~e-i~~~l~~~ 308 (369)
+|...+ +.+........ .....++..+ +++||.|||||||||+++.+.+ +..++.+.
T Consensus 136 ~~~~~~--~~~~~~~~~~~---~~~~~~~~~~~~~~~d~ilL~SDG~~~~l~~~~~~~~~l~~~ 194 (212)
T PF13672_consen 136 DHSGEY--PNQTRSLTGDD---PEPDVQYGSIPLEEGDVILLCSDGVWDNLRSYEDLEQFLKDL 194 (212)
T ss_dssp --BHHH--HHCTTSCCHHC---CCTETEEEEEE--TT-EEEEE-HHHHTTS-HHHHHHHH----
T ss_pred Cccchh--hhhhhccCccc---cccCCeEEEEEcCCCCEEEEECcCccccCCCHHHHHHHhhhc
Confidence 865333 22222221110 0123455667 8999999999999999998655 67777665
No 18
>KOG1379|consensus
Probab=99.42 E-value=3.9e-13 Score=128.10 Aligned_cols=118 Identities=36% Similarity=0.454 Sum_probs=96.7
Q ss_pred CcceEEEeeeCCCCCCCCcc-----ccccCCCCCceeeeecc--------CCCCHHHHHHHHHHHHHHHhhcCCCCCCCc
Q psy4509 7 KEAKLFSAVSGIPKDFSNNK-----MFQLNKYGDDAYFTARY--------KTADVLEFSSFLMKTCERLVTSGRFSCTEP 73 (369)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~geda~f~~~~--------~~~~~~~~s~~L~~~~~~~~~~~~~~~~~p 73 (369)
..++.++..+++||+....+ -|.-.. .-+.++... .+|||+.|||+||++|++.++..+|.+++|
T Consensus 70 t~~~~~~~~~~~~~~~~~~~~GEDa~Fvss~--~~~~v~GVADGVGGWa~~GiDpg~fS~eLM~~ce~~v~~~~~~~~~P 147 (330)
T KOG1379|consen 70 TSLCGFSKDFIRPHPSKVGKGGEDAWFVSSN--PHAIVMGVADGVGGWAEYGIDPGAFSRELMSNCERLVQNSDFNPSDP 147 (330)
T ss_pred hhhccccccccCCccccCCCCCCcceeeccC--cccceEEEccccchHhhcCcCHHHHHHHHHHHHHHHhcccccCCCCh
Confidence 56888999999999864322 233222 223333333 459999999999999999999999999999
Q ss_pred hhHHHHHHHHHhccCccccccceeeeeeccCCceEEEeccCCCcEE-EEEcCCc
Q psy4509 74 TSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIV-RVADGVG 126 (369)
Q Consensus 74 ~~lL~~~~~~~~~~~~~~~G~st~~~~r~~neD~~~~~~~~g~~~f-aVaDGvG 126 (369)
..||.++|++++.++++..|+||+|++.++.|+..++.+|+||+.| +|=||.=
T Consensus 148 ~~lL~~ay~~l~~~~~~~vGSSTAcI~~l~~~~~~Lh~aNLGDSGF~VvR~G~v 201 (330)
T KOG1379|consen 148 VNLLEKAYAELKSQKVPIVGSSTACILALDRENGKLHTANLGDSGFLVVREGKV 201 (330)
T ss_pred HHHHHHHHHHHhhcCCCCCCcceeeeeeeecCCCeEEEeeccCcceEEEECCEE
Confidence 9999999999999999999999999999999999999999999855 5556543
No 19
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription]
Probab=98.92 E-value=1.8e-07 Score=93.37 Aligned_cols=194 Identities=20% Similarity=0.128 Sum_probs=120.7
Q ss_pred cCCceEEEeccC-CCcEEEEEcCCcccccCCCChhHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHccCCCCCC
Q psy4509 103 NKETSTLCTANI-GNSIVRVADGVGGWRNYGIDPGEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGS 181 (369)
Q Consensus 103 ~neD~~~~~~~~-g~~~faVaDGvGG~~~~g~~a~~~a~~l~~~~~~~~~~~~~~~~~~~~~L~~a~~~~~~~~~~~~g~ 181 (369)
.+.|.|.+.... ..-.++|+|.+|= |+.|+...... ....+.+... ...+|.+.|++.+..+....... -.
T Consensus 161 vGGD~yd~~~~~~~~~~i~I~DvsG~----Gv~aal~m~~~-~~~~~~~~~~--~~~~p~~~l~~~n~~~~~~~~~~-~f 232 (367)
T COG2208 161 VGGDYYDFIQLGEKRLRIGIGDVSGK----GVPAALLMLMP-KLALRLLLES--GPLDPADVLETLNRVLKQNLEED-MF 232 (367)
T ss_pred cCCceEEEEEECCcEEEEEEEeccCC----CHHHHHHHHHH-HHHHHHhhhc--ccCCHHHHHHHHHHHHHhcccCC-cE
Confidence 456666554433 3457899998885 67565552222 2222222221 14678888877776654432211 12
Q ss_pred cceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeE---EEeCcccccccCCcccc
Q psy4509 182 STTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKV---IHRSEEQQHYFNTPFQL 258 (369)
Q Consensus 182 sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i---~~lT~dq~h~~~~p~ql 258 (369)
+|.+ ...++..++++..+|+|--..++++.++. ..++.- -..+
T Consensus 233 ~T~~---------------------------~~~~d~~~~~l~y~~aGH~p~~i~~~~~~~~~~~l~~~-------g~pi 278 (367)
T COG2208 233 VTLF---------------------------LGVYDLDSGELTYSNAGHEPALILSADGEIEVEDLTAL-------GLPI 278 (367)
T ss_pred EEEE---------------------------EEEEeccCCEEEEeeCCCCCeeEEEcCCCceeEEccCC-------Ccee
Confidence 3434 56777778999999999999999997542 222210 0111
Q ss_pred cCCCCCCCCCccccceeeee-ecCCCEEEEeccCCCC-------CCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHH
Q psy4509 259 SLPPLSHTTQVLESCKRRGL-VVHGDVILLATDGVFD-------NVPDSLLLAELVRAQGSKDPMQLQLVANTIALMART 330 (369)
Q Consensus 259 ~~~~~~~~~~vl~~~d~~~~-l~~gD~llLaSDGl~D-------~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~ 330 (369)
|..+. ....+... +++||.++|.|||+++ .+..+...+++.... ..+++++++.+.+...+
T Consensus 279 G~~~~-------~~~~~~~~~l~~gd~lvl~tDGv~Ea~~~~~~~~~~~~~~~~~~~~~----~~~~~e~~~~i~~~l~~ 347 (367)
T COG2208 279 GLLPD-------YQYEVASLQLEPGDLLVLYTDGVTEARNSDGEFFGLERLLKILGRLL----GQPAEEILEAILESLEE 347 (367)
T ss_pred eecCC-------ccchheeEEecCCCEEEEEcCCeeeeecCCccEecHHHHHHHHHHHh----CCCHHHHHHHHHHHHHH
Confidence 21111 12334456 8999999999999999 455566677776532 35789999999998887
Q ss_pred hccCCCCCChHHHHHHhCCCCCCCCCCCceEEEEEEEe
Q psy4509 331 LAFDETYMSPFAIQARANGISTQGGKPDDITVLLAIVA 368 (369)
Q Consensus 331 ~s~d~~~~sPf~~~a~~~~~~~~gGk~DDITVvv~~v~ 368 (369)
..-+ --..||||+|++++.
T Consensus 348 ~~~~-------------------~~~~DDiTll~lk~~ 366 (367)
T COG2208 348 LQGD-------------------QIQDDDITLLVLKVK 366 (367)
T ss_pred hhCC-------------------ccccCceEEEEEEec
Confidence 5211 135788999999873
No 20
>KOG0618|consensus
Probab=98.61 E-value=1.2e-07 Score=101.54 Aligned_cols=118 Identities=14% Similarity=0.225 Sum_probs=89.6
Q ss_pred CCceEEEEecCCceEEEECCeEEEeCcccccccCCcccc-------cCCCCC-----------------CCCCcccccee
Q psy4509 220 TSTLYTANIGDSGFVIVRRGKVIHRSEEQQHYFNTPFQL-------SLPPLS-----------------HTTQVLESCKR 275 (369)
Q Consensus 220 ~~~l~vanvGDSr~yl~R~g~i~~lT~dq~h~~~~p~ql-------~~~~~~-----------------~~~~vl~~~d~ 275 (369)
..++.+||+|+|.+++.|+|+-+++|+.+.+.. .|.+. |.+... .-.+|+..|.+
T Consensus 628 S~~l~~Anvg~c~avls~ng~~~p~t~~~~~~v-~~eE~~RI~~~~g~i~ed~k~ngvt~~tR~iG~~~l~P~v~p~Phv 706 (1081)
T KOG0618|consen 628 SKTLFAANVGTCMAVLSRNGKPLPTTRSPMLEV-DREEYKRIVDSKGFITEDNKLNGVTSSTRAIGPFSLFPHVLPDPHV 706 (1081)
T ss_pred chhhhHhhhccchhhhhhcCCcCcccccccccC-CHHHHHHHHHhcCeecCCCeeeceeeeeeecccccccccccCCCce
Confidence 368999999999999999999888876543221 11111 111100 00134577888
Q ss_pred eee-e-cCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCC
Q psy4509 276 RGL-V-VHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQ 353 (369)
Q Consensus 276 ~~~-l-~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~ 353 (369)
..+ | +.+++||+++-+||++|+-+++++.++.. .+|-.+|++|++.|...
T Consensus 707 ~~~~Lt~qdE~LIvgn~~lW~~Lsid~a~~~vRn~------~dpL~AAkKL~d~AqSY---------------------- 758 (1081)
T KOG0618|consen 707 SVVILTEQDEFLIVGNKQLWSVLSIDTAVDAVRNV------EDPLLAAKKLCDLAQSY---------------------- 758 (1081)
T ss_pred eeEecccCceEEEEcchHHhhhccHHHHHHHHhcC------CchHHHHHHHHHHHHhc----------------------
Confidence 887 5 56779999999999999999999999864 48999999999999875
Q ss_pred CCCCCceEEEEEEE
Q psy4509 354 GGKPDDITVLLAIV 367 (369)
Q Consensus 354 gGk~DDITVvv~~v 367 (369)
|..|||+|||+.+
T Consensus 759 -gc~~nv~vlVv~l 771 (1081)
T KOG0618|consen 759 -GCAENVSVLVVRL 771 (1081)
T ss_pred -ccccCeeEEEEEe
Confidence 8889999999976
No 21
>PRK10693 response regulator of RpoS; Provisional
Probab=89.95 E-value=5.3 Score=38.69 Aligned_cols=106 Identities=13% Similarity=0.017 Sum_probs=59.5
Q ss_pred CCceEEEec-cCCCcEEEEEc--CCcccccCCCChhHHHHHHHHHHHHHH-hcCCCCCCCHHHHHHHHHHHHHHccCCCC
Q psy4509 104 KETSTLCTA-NIGNSIVRVAD--GVGGWRNYGIDPGEFSSFLMKTCERLV-TSGRFSCTEPTSLLARSYYELLENKQPIL 179 (369)
Q Consensus 104 neD~~~~~~-~~g~~~faVaD--GvGG~~~~g~~a~~~a~~l~~~~~~~~-~~~~~~~~~~~~~L~~a~~~~~~~~~~~~ 179 (369)
..|-+.+.. ..+...|-++| ||||| |+-++...+.++..+.+.. ........+|.++|+..+..+.+... .
T Consensus 150 ~GD~~d~~~l~~~~~~~~~~DvsGhg~h---g~~aa~l~~~~~~~~~~~~~~~~~~~~~~p~~~l~~lN~~l~~~~~--~ 224 (303)
T PRK10693 150 PGLVLDIAALSDNDLAFYCLDVTRAGDN---GVLAALLLRALFNGLLQEQLAHQNQRLPELGALLKQVNHLLRQANL--P 224 (303)
T ss_pred CccEEeeeecCCCcEEEEEEecCCCCcc---cHHHHHHHHHHHHHHHHHHhcccccccCCHHHHHHHHHHHHHhcCC--C
Confidence 456655544 22334677877 55554 3434444444333222111 00111123688888888887654321 1
Q ss_pred CCcceeeeecccccccccccccCCcccccCceeEEEEecCCCceEEEEecCCceEEEECCeE
Q psy4509 180 GSSTTCIVILNKETSTLYTANIGDSIVRSSTACIVILNKETSTLYTANIGDSGFVIVRRGKV 241 (369)
Q Consensus 180 g~sTa~va~L~~~~~~~~~~~~g~~~~~~st~~v~~l~~~~~~l~vanvGDSr~yl~R~g~i 241 (369)
+.-|++ ..+++..+++|.++|.|....++..++++
T Consensus 225 ~~~t~~---------------------------~~~~d~~~~~l~~~~AGhp~~~~~~~~~~ 259 (303)
T PRK10693 225 GQFPLL---------------------------VGYYHRELKNLILVSAGLNATLNTGEHQV 259 (303)
T ss_pred ceeeEE---------------------------EEEEEcCCCeEEEEeCCCCCEEecCCeEE
Confidence 223444 56788888999999999999885444544
No 22
>PF09436 DUF2016: Domain of unknown function (DUF2016); InterPro: IPR018560 This entry represents the N-terminal of proteins that contain a ubiquitin domain.
Probab=52.83 E-value=7.8 Score=29.75 Aligned_cols=18 Identities=39% Similarity=0.612 Sum_probs=15.1
Q ss_pred cCCCEEEEeccCCCCCCC
Q psy4509 280 VHGDVILLATDGVFDNVP 297 (369)
Q Consensus 280 ~~gD~llLaSDGl~D~l~ 297 (369)
++|.++|+++||+|=.+.
T Consensus 25 ~~G~Rllva~nGv~lEv~ 42 (72)
T PF09436_consen 25 RPGHRLLVASNGVFLEVR 42 (72)
T ss_pred cCCcEEEEecCcEEEEEe
Confidence 489999999999996544
No 23
>PF05674 DUF816: Baculovirus protein of unknown function (DUF816); InterPro: IPR008534 This entry is represented by Autographa californica nuclear polyhedrosis virus (AcMNPV), Orf106. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family includes proteins that are about 200 amino acids in length. The proteins are all from baculoviruses. This family includes ORF107 from Orgyia pseudotsugata multicapsid polyhedrosis virus (OpMNPV) and a variety of other numbered ORF proteins, such as ORF52 Q91F03 from SWISSPROT, ORF140 Q9YMI8 from SWISSPROT from other baculoviruses. The function of these proteins is unknown.
Probab=52.28 E-value=25 Score=31.18 Aligned_cols=45 Identities=24% Similarity=0.347 Sum_probs=39.0
Q ss_pred CCHHHHHHHHHH-HHHHHhhcCCCCCCCchhHHHHHHHHHhccCcc
Q psy4509 46 ADVLEFSSFLMK-TCERLVTSGRFSCTEPTSLLARSYYELLENKQP 90 (369)
Q Consensus 46 ~~~~~~s~~L~~-~~~~~~~~~~~~~~~p~~lL~~~~~~~~~~~~~ 90 (369)
+|+-+|+|||.. +|..+++.+..-+.+-..++..++.++...++.
T Consensus 2 i~vdeFarqLIadkcs~LIes~~mLp~nvl~iik~A~~ey~~~Pt~ 47 (171)
T PF05674_consen 2 IDVDEFARQLIADKCSALIESENMLPDNVLAIIKTARDEYFENPTD 47 (171)
T ss_pred CCHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHhcCCCh
Confidence 789999999975 788999999999999999999999998775554
No 24
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain. The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=36.82 E-value=1.7e+02 Score=26.56 Aligned_cols=92 Identities=16% Similarity=0.132 Sum_probs=48.4
Q ss_pred cCCCCCceeeeecc--CC------C------CHHHHHHHHHHHHHHHhhcCCC-CCCCchhHHHHHHHHHhc----cC--
Q psy4509 30 LNKYGDDAYFTARY--KT------A------DVLEFSSFLMKTCERLVTSGRF-SCTEPTSLLARSYYELLE----NK-- 88 (369)
Q Consensus 30 ~~~~geda~f~~~~--~~------~------~~~~~s~~L~~~~~~~~~~~~~-~~~~p~~lL~~~~~~~~~----~~-- 88 (369)
...-.||+||+... .. + .++.|+.+.+...+........ ....+..++.+++..... ..
T Consensus 16 ~r~~neD~~~~~~~~~~~~~~~~v~DG~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 95 (255)
T smart00332 16 VRKPMEDAHVITPDLSDSGAFFGVFDGHGGSEAAKFLSKNLPEILAEELIKHKDELEDVEEALRKAFLKTDEEILEELES 95 (255)
T ss_pred CCCCCcceEEEeccCCCCeEEEEEEeCCCcHHHHHHHHHHHHHHHHHhHhhcccchhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 34567888888764 22 1 1344554444433322211111 112466666665554432 11
Q ss_pred --ccccccceeeeeeccCCceEEEeccCCCcEEEEEc
Q psy4509 89 --QPILGSSTACIVILNKETSTLCTANIGNSIVRVAD 123 (369)
Q Consensus 89 --~~~~G~st~~~~r~~neD~~~~~~~~g~~~faVaD 123 (369)
....+.+|++.+.+.++. ++..|.|++-+.+..
T Consensus 96 ~~~~~~~gtT~~~~~~~~~~--l~~~~vGDsr~y~~~ 130 (255)
T smart00332 96 LEEDAGSGSTAVVALISGNK--LYVANVGDSRAVLCR 130 (255)
T ss_pred ccCCCCCCccEEEEEEECCE--EEEEeccCceEEEEe
Confidence 113467778777777554 777899998655555
No 25
>COG2168 DsrH Uncharacterized conserved protein involved in oxidation of intracellular sulfur [Inorganic ion transport and metabolism]
Probab=36.32 E-value=26 Score=28.43 Aligned_cols=30 Identities=33% Similarity=0.587 Sum_probs=26.2
Q ss_pred ecCCCEEEEeccCCCCCCChHHHHHHHHhh
Q psy4509 279 VVHGDVILLATDGVFDNVPDSLLLAELVRA 308 (369)
Q Consensus 279 l~~gD~llLaSDGl~D~l~~~ei~~~l~~~ 308 (369)
+++||-|+|+.|||+=.+...+..+-++..
T Consensus 22 l~~~D~vlL~qdGV~aAl~~~~~~~sl~~~ 51 (96)
T COG2168 22 LTEGDAVLLLQDGVYAALKGNRYLASLRES 51 (96)
T ss_pred hcccCeEEEEcccchhhhcCcHHHHHHhcC
Confidence 789999999999999999888877777654
No 26
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg. pyruvate dehydrogenase (lipoamide)-phosphatase (3.1.3.43 from EC), adenylate cyclase (4.6.1.1 from EC) and some bacterial stage II sporulation E proteins (3.1.3.16 from EC). Protein phosphatase 2C (PP2C) is one of the four major classes of mammalian serine/threonine specific protein phosphatases (3.1.3.16 from EC). PP2C [] is a monomeric enzyme of about 42 Kd which shows broad substrate specificity and is dependent on divalent cations (mainly manganese and magnesium) for its activity. Its exact physiological role is still unclear. Three isozymes are currently known in mammals: PP2C-alpha, -beta and -gamma. In yeast, there are at least four PP2C homologs: phosphatase PTC1 [], which has weak tyrosine phosphatase activity in addition to its activity on serines, phosphatases PTC2 and PTC3, and hypothetical protein YBR125c. Isozymes of PP2C are also known from Arabidopsis thaliana (ABI1, PPH1), Caenorhabditis elegans (FEM-2, F42G9.1, T23F11.1), Leishmania chagasi and Paramecium tetraurelia. In A. thaliana, the kinase associated protein phosphatase (KAPP) [] is an enzyme that dephosphorylates the Ser/Thr receptor-like kinase RLK5 and which contains a C-terminal PP2C domain. PP2C does not seem to be evolutionary related to the main family of serine/ threonine phosphatases: PP1, PP2A and PP2B. However, it is significantly similar to the catalytic subunit of pyruvate dehydrogenase phosphatase 3.1.3.43 from EC (PDPC) [], which catalyzes dephosphorylation and concomitant reactivation of the alpha subunit of the E1 component of the pyruvate dehydrogenase complex. PDPC is a mitochondrial enzyme and, like PP2C, is magnesium-dependent.; GO: 0003824 catalytic activity; PDB: 3KE6_B 3ZT9_A 3RNR_A 3EQ2_A 3F7A_B 3F79_A 3ES2_B 3PU9_B 3T91_B 3T9Q_B ....
Probab=33.16 E-value=2.7e+02 Score=24.10 Aligned_cols=77 Identities=25% Similarity=0.290 Sum_probs=48.9
Q ss_pred CCCCHHHHHHHHHHHHHHHhhcCCCCCCCchhHHHHHHHHHhccCccccccceeeeeeccCCceEEEeccCCCcEEEEEc
Q psy4509 44 KTADVLEFSSFLMKTCERLVTSGRFSCTEPTSLLARSYYELLENKQPILGSSTACIVILNKETSTLCTANIGNSIVRVAD 123 (369)
Q Consensus 44 ~~~~~~~~s~~L~~~~~~~~~~~~~~~~~p~~lL~~~~~~~~~~~~~~~G~st~~~~r~~neD~~~~~~~~g~~~faVaD 123 (369)
.++.++.++..+.........+. . .|.+++......+...........|+|+..+..++..+...|.|...+.+..
T Consensus 15 hG~~aa~~~~~~~~~~~~~~~~~-~---~p~~~l~~ln~~l~~~~~~~~~~~t~~~~~~d~~~~~l~~~~aG~~~~l~~~ 90 (193)
T PF07228_consen 15 HGVSAALLSAALASAIRELLDEG-L---DPEELLEALNRRLYRDLKGDNRYATACYAIIDPETGTLTYANAGHPPPLLLR 90 (193)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHTT-T---SHHHHHHHHHHHHHHHTTTTSTTEEEEEEEEETTTTEEEEEEESSSEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHcC-C---CHHHHHHHHHHHHHHHhhhccccceEEEEEecccceEEEEeCCCCCCEEEEe
Confidence 34667777777766666555332 2 2888887777766332222234567777777777777777777776666665
Q ss_pred C
Q psy4509 124 G 124 (369)
Q Consensus 124 G 124 (369)
+
T Consensus 91 ~ 91 (193)
T PF07228_consen 91 P 91 (193)
T ss_dssp T
T ss_pred c
Confidence 4
No 27
>PF06972 DUF1296: Protein of unknown function (DUF1296); InterPro: IPR009719 This family represents a conserved region approximately 60 residues long within a number of plant proteins of unknown function.
Probab=31.92 E-value=64 Score=23.81 Aligned_cols=27 Identities=11% Similarity=0.052 Sum_probs=23.0
Q ss_pred CChHHHHHHHHhhhCCCCCchHHHHHHHHHHH
Q psy4509 296 VPDSLLLAELVRAQGSKDPMQLQLVANTIALM 327 (369)
Q Consensus 296 l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~ 327 (369)
-+++||...|.+. ..+|.+++++|+.+
T Consensus 19 hse~eIya~L~ec-----nMDpnea~qrLL~q 45 (60)
T PF06972_consen 19 HSEEEIYAMLKEC-----NMDPNEAVQRLLSQ 45 (60)
T ss_pred CCHHHHHHHHHHh-----CCCHHHHHHHHHhc
Confidence 5889999999987 47899999999863
No 28
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity.
Probab=30.02 E-value=2.8e+02 Score=24.87 Aligned_cols=31 Identities=23% Similarity=0.374 Sum_probs=21.1
Q ss_pred ccccceeeeeeccCCceEEEeccCCCcEEEEEc
Q psy4509 91 ILGSSTACIVILNKETSTLCTANIGNSIVRVAD 123 (369)
Q Consensus 91 ~~G~st~~~~r~~neD~~~~~~~~g~~~faVaD 123 (369)
..+.+|++.+...+ ..++..+.|++-+.+..
T Consensus 97 ~~~gtT~~~~~~~~--~~l~~~~vGDsr~~~~~ 127 (254)
T cd00143 97 ARSGTTAVVALIRG--NKLYVANVGDSRAVLCR 127 (254)
T ss_pred CCCCCcEEEEEEEC--CEEEEEEecCcEEEEEc
Confidence 45667777776664 36778899998555554
No 29
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=28.90 E-value=90 Score=28.50 Aligned_cols=52 Identities=13% Similarity=0.192 Sum_probs=37.2
Q ss_pred ecCCCEEEEeccCCC-----------CCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhc
Q psy4509 279 VVHGDVILLATDGVF-----------DNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLA 332 (369)
Q Consensus 279 l~~gD~llLaSDGl~-----------D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s 332 (369)
..-+|.+|+.|.|+| |+|.++...+.++.-. ..-.-|+++|..|+++-.+++
T Consensus 68 FDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~--D~~SIPKevA~qLI~MHq~RG 130 (237)
T COG3700 68 FDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGW--DEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred eccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCC--ccccchHHHHHHHHHHHHhcC
Confidence 344688888888877 5677777777776542 222348999999999987764
No 30
>PRK12764 hypothetical protein; Provisional
Probab=20.58 E-value=1.1e+02 Score=32.00 Aligned_cols=75 Identities=24% Similarity=0.198 Sum_probs=49.1
Q ss_pred eee-ecCCCEEEEeccCCCCCCChHHHHHHHHhhhCCCCCchHHHHHHHHHHHHHHhccCCCCCChHHHHHHhCCCCCCC
Q psy4509 276 RGL-VVHGDVILLATDGVFDNVPDSLLLAELVRAQGSKDPMQLQLVANTIALMARTLAFDETYMSPFAIQARANGISTQG 354 (369)
Q Consensus 276 ~~~-l~~gD~llLaSDGl~D~l~~~ei~~~l~~~~~~~~~~~~~~~A~~Lv~~A~~~s~d~~~~sPf~~~a~~~~~~~~g 354 (369)
.-. +.+||+|+-=.||+. .++.+.+.+++.... ..+..+..+.+.++......-.+|.....++.-..+..
T Consensus 423 gGv~V~PGDiIvaD~dGVv-vIP~~~aeeVl~~a~-------~~~~~E~~~~~~i~~G~~~~~l~~~~~~~~~~~~~~~~ 494 (500)
T PRK12764 423 GGATVQPGDVIVGDDDGVV-VIPPALAEEVADDAI-------AQEHEEAFIAERVAEGASVDGLYPMNAEWRAKYEEWRR 494 (500)
T ss_pred CCEEEcCCCEEEEcCCcEE-EEcHHHHHHHHHHHH-------HHHHHHHHHHHHHHCCCChHHccCcCHHHHHHHHHHhc
Confidence 345 899999999999997 788888888777653 34455666666666655555555665555544333434
Q ss_pred CCCC
Q psy4509 355 GKPD 358 (369)
Q Consensus 355 Gk~D 358 (369)
|++.
T Consensus 495 ~~~~ 498 (500)
T PRK12764 495 GRPA 498 (500)
T ss_pred cCCC
Confidence 4443
Done!