Query psy4510
Match_columns 812
No_of_seqs 939 out of 3644
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 19:02:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy4510.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/4510hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nr0_A Actin interacting prote 100.0 8E-60 2.7E-64 538.8 62.4 525 174-766 16-610 (611)
2 2ymu_A WD-40 repeat protein; u 100.0 2E-59 6.9E-64 534.5 64.7 508 169-790 9-564 (577)
3 2ymu_A WD-40 repeat protein; u 100.0 1.3E-57 4.5E-62 519.5 62.6 486 168-764 49-577 (577)
4 1nr0_A Actin interacting prote 100.0 9.8E-54 3.3E-58 488.4 55.8 455 169-719 52-610 (611)
5 3sfz_A APAF-1, apoptotic pepti 100.0 6.7E-54 2.3E-58 533.2 55.0 522 171-766 610-1248(1249)
6 1pgu_A Actin interacting prote 100.0 5.2E-52 1.8E-56 477.3 55.4 515 174-767 16-614 (615)
7 2oaj_A Protein SNI1; WD40 repe 100.0 7.4E-53 2.5E-57 497.9 42.9 515 167-769 9-666 (902)
8 3mkq_A Coatomer beta'-subunit; 100.0 9E-49 3.1E-53 465.8 47.0 480 166-764 3-502 (814)
9 3sfz_A APAF-1, apoptotic pepti 100.0 3E-48 1E-52 482.4 51.0 477 215-790 607-1193(1249)
10 1pgu_A Actin interacting prote 100.0 4.7E-46 1.6E-50 427.7 47.5 457 168-720 55-614 (615)
11 2oaj_A Protein SNI1; WD40 repe 100.0 1.8E-45 6.1E-50 434.9 48.4 540 174-769 56-785 (902)
12 2xyi_A Probable histone-bindin 100.0 1.2E-46 4E-51 411.1 25.3 365 60-444 28-411 (430)
13 3mkq_A Coatomer beta'-subunit; 100.0 3.1E-42 1E-46 409.6 44.4 459 215-792 5-485 (814)
14 1vyh_C Platelet-activating fac 100.0 1.8E-41 6.3E-46 367.1 40.3 290 216-686 101-409 (410)
15 2ynn_A Coatomer subunit beta'; 100.0 1.2E-41 4.3E-46 352.7 37.1 296 166-500 3-301 (304)
16 1vyh_C Platelet-activating fac 100.0 2.1E-41 7.2E-46 366.6 38.9 250 169-444 101-370 (410)
17 4g56_B MGC81050 protein; prote 100.0 2.7E-41 9.1E-46 358.3 35.1 325 230-768 12-344 (357)
18 1got_B GT-beta; complex (GTP-b 100.0 9.1E-41 3.1E-45 352.3 38.2 294 215-685 47-340 (340)
19 3ow8_A WD repeat-containing pr 100.0 7.5E-41 2.6E-45 349.1 35.3 290 217-686 26-319 (321)
20 2pm9_A Protein WEB1, protein t 100.0 8.9E-42 3E-46 371.8 29.4 363 223-768 12-415 (416)
21 4gqb_B Methylosome protein 50; 100.0 6.8E-40 2.3E-44 344.3 38.2 309 201-689 16-332 (344)
22 2ynn_A Coatomer subunit beta'; 100.0 1.5E-39 5.3E-44 337.0 38.9 297 262-767 3-302 (304)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.1E-40 2.8E-44 345.6 37.3 328 215-690 7-337 (345)
24 3iz6_a 40S ribosomal protein R 100.0 1E-40 3.4E-45 357.7 29.5 310 215-689 58-376 (380)
25 3iz6_a 40S ribosomal protein R 100.0 3E-40 1E-44 354.1 32.5 265 168-444 58-330 (380)
26 4gqb_B Methylosome protein 50; 100.0 2.6E-39 9E-44 339.9 39.0 291 174-502 28-331 (344)
27 3ow8_A WD repeat-containing pr 100.0 1.9E-39 6.5E-44 338.5 36.6 289 170-498 26-318 (321)
28 4g56_B MGC81050 protein; prote 100.0 2.6E-39 8.8E-44 343.0 37.3 295 174-500 40-341 (357)
29 2pbi_B Guanine nucleotide-bind 100.0 6.5E-39 2.2E-43 339.7 39.2 295 215-685 56-354 (354)
30 2pm9_A Protein WEB1, protein t 100.0 2.5E-40 8.5E-45 360.3 29.0 258 175-444 11-295 (416)
31 3frx_A Guanine nucleotide-bind 100.0 1.2E-38 4.2E-43 332.5 40.4 305 263-768 8-318 (319)
32 1r5m_A SIR4-interacting protei 100.0 1.9E-39 6.6E-44 354.2 35.3 348 174-687 43-424 (425)
33 1r5m_A SIR4-interacting protei 100.0 3.3E-39 1.1E-43 352.4 37.1 367 200-766 26-424 (425)
34 1got_B GT-beta; complex (GTP-b 100.0 1.6E-38 5.6E-43 335.0 40.4 294 164-497 43-339 (340)
35 3frx_A Guanine nucleotide-bind 100.0 1.5E-38 5E-43 332.0 37.0 254 168-444 9-268 (319)
36 2hes_X YDR267CP; beta-propelle 100.0 2.2E-38 7.6E-43 332.3 38.4 311 263-767 5-328 (330)
37 3fm0_A Protein CIAO1; WDR39,SG 100.0 1.9E-38 6.4E-43 335.2 37.9 311 168-501 7-335 (345)
38 2hes_X YDR267CP; beta-propelle 100.0 9.6E-39 3.3E-43 335.1 34.4 265 168-443 6-280 (330)
39 2xzm_R RACK1; ribosome, transl 100.0 2.8E-38 9.6E-43 333.8 38.2 216 215-443 13-244 (343)
40 2pbi_B Guanine nucleotide-bind 100.0 9.1E-38 3.1E-42 330.9 40.7 297 165-497 53-353 (354)
41 2j04_B YDR362CP, TAU91; beta p 100.0 3E-39 1E-43 356.4 28.5 343 222-768 132-518 (524)
42 1erj_A Transcriptional repress 100.0 8.2E-38 2.8E-42 336.7 38.6 315 201-686 42-387 (393)
43 4ery_A WD repeat-containing pr 100.0 1.6E-37 5.5E-42 323.7 38.1 294 263-766 14-311 (312)
44 1gxr_A ESG1, transducin-like e 100.0 2.5E-37 8.5E-42 326.0 39.4 328 222-766 8-336 (337)
45 1gxr_A ESG1, transducin-like e 100.0 2.4E-37 8.1E-42 326.2 39.0 326 175-686 8-335 (337)
46 4ery_A WD repeat-containing pr 100.0 3.8E-37 1.3E-41 320.9 38.0 292 167-498 14-309 (312)
47 2j04_B YDR362CP, TAU91; beta p 100.0 8.5E-39 2.9E-43 352.8 25.4 240 191-443 175-428 (524)
48 4aow_A Guanine nucleotide-bind 100.0 6.2E-37 2.1E-41 323.5 38.5 309 263-769 29-339 (340)
49 4aow_A Guanine nucleotide-bind 100.0 1E-36 3.5E-41 321.9 38.7 328 194-690 9-339 (340)
50 3vl1_A 26S proteasome regulato 100.0 6E-37 2.1E-41 334.0 37.5 243 177-444 57-323 (420)
51 1erj_A Transcriptional repress 100.0 1.9E-36 6.4E-41 326.1 40.5 306 269-768 61-390 (393)
52 3vl1_A 26S proteasome regulato 100.0 7.6E-37 2.6E-41 333.2 36.2 341 275-768 59-420 (420)
53 2xzm_R RACK1; ribosome, transl 100.0 3E-36 1E-40 318.2 39.6 309 167-499 12-338 (343)
54 4e54_B DNA damage-binding prot 100.0 2.3E-37 7.9E-42 338.2 30.5 315 263-769 110-432 (435)
55 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.3E-35 1.1E-39 322.6 41.7 323 168-687 110-441 (445)
56 2pm7_B Protein transport prote 100.0 9.2E-36 3.1E-40 307.5 35.0 263 169-444 2-286 (297)
57 3ei3_B DNA damage-binding prot 100.0 1.2E-35 4E-40 319.5 36.3 307 263-767 64-382 (383)
58 2ovr_B FBW7, F-BOX/WD repeat p 100.0 3.4E-35 1.2E-39 322.5 40.4 326 216-768 111-443 (445)
59 2j04_A TAU60, YPL007P, hypothe 100.0 1.3E-36 4.4E-41 324.7 26.4 322 221-756 13-350 (588)
60 3gre_A Serine/threonine-protei 100.0 3.1E-36 1.1E-40 330.1 29.3 376 183-764 34-437 (437)
61 3dm0_A Maltose-binding peripla 100.0 3.9E-35 1.3E-39 340.6 39.4 256 170-444 376-633 (694)
62 3v7d_B Cell division control p 100.0 1.5E-34 5.2E-39 319.4 40.7 317 263-764 112-460 (464)
63 3v7d_B Cell division control p 100.0 7.2E-35 2.5E-39 322.0 38.0 248 168-444 113-382 (464)
64 3zwl_B Eukaryotic translation 100.0 2.2E-34 7.5E-39 307.6 38.9 311 263-769 23-348 (369)
65 3ei3_B DNA damage-binding prot 100.0 1.7E-34 5.7E-39 310.4 37.4 310 215-688 65-382 (383)
66 3dm0_A Maltose-binding peripla 100.0 1.2E-34 4.2E-39 336.5 37.6 215 217-444 376-593 (694)
67 3zwl_B Eukaryotic translation 100.0 6.1E-34 2.1E-38 304.1 39.7 307 216-688 25-346 (369)
68 3dwl_C Actin-related protein 2 100.0 1.8E-35 6.1E-40 317.3 27.6 341 267-765 6-377 (377)
69 4e54_B DNA damage-binding prot 100.0 2E-35 6.8E-40 322.9 28.3 294 169-500 112-429 (435)
70 1k8k_C P40, ARP2/3 complex 41 100.0 2.1E-34 7.1E-39 308.3 35.1 216 219-444 4-234 (372)
71 4a11_B DNA excision repair pro 100.0 1.2E-34 4.2E-39 314.3 33.4 346 198-720 22-405 (408)
72 3bg1_A Protein SEC13 homolog; 100.0 1.8E-35 6.2E-40 308.1 25.8 262 172-444 9-294 (316)
73 3i2n_A WD repeat-containing pr 100.0 1.4E-34 4.8E-39 307.7 32.4 320 265-769 11-355 (357)
74 3odt_A Protein DOA1; ubiquitin 100.0 5.2E-34 1.8E-38 297.2 35.9 290 262-769 8-298 (313)
75 3k26_A Polycomb protein EED; W 100.0 1E-34 3.5E-39 309.8 31.1 338 267-766 13-365 (366)
76 3dwl_C Actin-related protein 2 100.0 2.1E-35 7.3E-40 316.7 25.6 253 174-443 9-281 (377)
77 1sq9_A Antiviral protein SKI8; 100.0 1.9E-34 6.6E-39 311.6 32.9 221 215-444 8-268 (397)
78 1sq9_A Antiviral protein SKI8; 100.0 2.2E-34 7.6E-39 311.1 32.7 256 168-444 8-323 (397)
79 3k26_A Polycomb protein EED; W 100.0 1.7E-34 5.7E-39 308.2 30.0 257 173-445 15-320 (366)
80 4a11_B DNA excision repair pro 100.0 1.9E-33 6.4E-38 304.9 37.3 261 169-444 36-324 (408)
81 4aez_A CDC20, WD repeat-contai 100.0 2.6E-33 8.8E-38 302.8 37.4 290 221-691 89-383 (401)
82 4gga_A P55CDC, cell division c 100.0 5.2E-33 1.8E-37 302.3 38.5 286 225-688 107-395 (420)
83 1k8k_C P40, ARP2/3 complex 41 100.0 1.6E-33 5.6E-38 301.4 33.4 310 174-499 6-358 (372)
84 3odt_A Protein DOA1; ubiquitin 100.0 4.9E-33 1.7E-37 289.8 34.8 288 166-501 8-296 (313)
85 3i2n_A WD repeat-containing pr 100.0 5.6E-33 1.9E-37 295.3 33.0 307 173-499 15-351 (357)
86 2pm7_B Protein transport prote 100.0 3.3E-32 1.1E-36 280.8 37.2 260 217-500 3-284 (297)
87 3gre_A Serine/threonine-protei 100.0 8.2E-34 2.8E-38 310.9 26.2 258 167-445 53-361 (437)
88 4ggc_A P55CDC, cell division c 100.0 3.4E-32 1.2E-36 284.2 37.3 283 226-688 28-315 (318)
89 2j04_A TAU60, YPL007P, hypothe 100.0 4.8E-34 1.6E-38 304.9 23.3 265 174-497 13-293 (588)
90 4gga_A P55CDC, cell division c 100.0 3.1E-32 1.1E-36 296.2 37.7 242 179-444 108-354 (420)
91 4h5i_A Guanine nucleotide-exch 100.0 1.8E-32 6.2E-37 291.2 33.0 295 223-688 14-343 (365)
92 3dw8_B Serine/threonine-protei 100.0 3.7E-33 1.3E-37 306.8 28.5 317 174-499 26-444 (447)
93 3jrp_A Fusion protein of prote 100.0 9.7E-33 3.3E-37 296.0 29.2 263 168-444 3-288 (379)
94 2aq5_A Coronin-1A; WD40 repeat 100.0 9.6E-33 3.3E-37 298.6 28.6 297 180-501 38-342 (402)
95 3f3f_A Nucleoporin SEH1; struc 100.0 3.1E-32 1.1E-36 288.2 32.0 268 172-445 7-339 (351)
96 3dw8_B Serine/threonine-protei 100.0 3.9E-32 1.3E-36 298.6 32.6 332 270-765 26-444 (447)
97 2xyi_A Probable histone-bindin 100.0 5.9E-32 2E-36 294.7 32.9 316 177-499 46-408 (430)
98 4ggc_A P55CDC, cell division c 100.0 2.8E-31 9.6E-36 277.2 36.6 242 179-444 28-274 (318)
99 3bg1_A Protein SEC13 homolog; 100.0 1.5E-32 5.2E-37 286.0 26.7 264 215-500 5-292 (316)
100 1yfq_A Cell cycle arrest prote 100.0 8.4E-32 2.9E-36 284.4 32.3 281 172-494 7-315 (342)
101 4aez_A CDC20, WD repeat-contai 100.0 2.3E-31 7.9E-36 287.5 35.0 285 173-502 88-381 (401)
102 3f3f_A Nucleoporin SEH1; struc 100.0 1.4E-31 4.7E-36 283.2 30.8 310 265-769 4-339 (351)
103 1p22_A F-BOX/WD-repeat protein 100.0 4.2E-31 1.4E-35 288.8 35.5 243 167-444 124-366 (435)
104 4h5i_A Guanine nucleotide-exch 100.0 2.9E-32 9.8E-37 289.6 25.2 309 78-444 10-344 (365)
105 1yfq_A Cell cycle arrest prote 100.0 4.9E-31 1.7E-35 278.5 34.5 303 218-686 6-322 (342)
106 1p22_A F-BOX/WD-repeat protein 100.0 1.3E-30 4.5E-35 284.9 37.1 287 219-689 129-415 (435)
107 3mmy_A MRNA export factor; mRN 100.0 4.7E-31 1.6E-35 281.6 32.6 292 166-496 29-341 (368)
108 1k32_A Tricorn protease; prote 100.0 2E-30 6.7E-35 314.4 41.9 474 175-769 13-639 (1045)
109 3mmy_A MRNA export factor; mRN 100.0 1.5E-30 5.2E-35 277.6 32.6 169 261-444 28-200 (368)
110 2aq5_A Coronin-1A; WD40 repeat 100.0 1.5E-30 5.3E-35 281.3 32.4 305 225-699 36-353 (402)
111 3jrp_A Fusion protein of prote 100.0 3.5E-30 1.2E-34 276.1 34.5 271 263-692 2-291 (379)
112 4gq1_A NUP37; propeller, trans 100.0 3.7E-31 1.3E-35 284.5 24.6 290 318-765 88-387 (393)
113 3jro_A Fusion protein of prote 100.0 4.9E-31 1.7E-35 307.6 23.1 261 170-444 3-286 (753)
114 2vdu_B TRNA (guanine-N(7)-)-me 100.0 8.5E-29 2.9E-33 271.7 36.7 280 177-491 5-373 (450)
115 3bws_A Protein LP49; two-domai 100.0 1.3E-28 4.5E-33 269.1 35.7 380 174-767 25-432 (433)
116 3bws_A Protein LP49; two-domai 100.0 1E-28 3.5E-33 270.1 32.9 228 195-444 95-335 (433)
117 3jro_A Fusion protein of prote 100.0 1.2E-29 4.2E-34 295.8 27.0 265 266-689 3-286 (753)
118 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-28 4.3E-33 270.4 31.9 206 223-445 4-273 (450)
119 1k32_A Tricorn protease; prote 100.0 1.4E-27 4.6E-32 289.5 42.8 425 222-768 13-503 (1045)
120 3lrv_A PRE-mRNA-splicing facto 100.0 1.3E-28 4.5E-33 259.7 27.2 241 183-444 43-293 (343)
121 3vu4_A KMHSV2; beta-propeller 100.0 1.8E-28 6.1E-33 259.6 27.6 290 263-722 10-338 (355)
122 1l0q_A Surface layer protein; 100.0 4.1E-27 1.4E-31 253.5 38.7 326 236-755 3-366 (391)
123 2w18_A PALB2, fancn, partner a 100.0 5.5E-28 1.9E-32 242.3 28.8 279 321-766 41-356 (356)
124 3vu4_A KMHSV2; beta-propeller 100.0 7.7E-28 2.6E-32 254.7 31.4 297 169-500 12-335 (355)
125 1l0q_A Surface layer protein; 100.0 2.5E-27 8.4E-32 255.2 35.1 228 189-444 2-234 (391)
126 4gq1_A NUP37; propeller, trans 100.0 5E-29 1.7E-33 267.8 20.1 251 174-442 87-388 (393)
127 3lrv_A PRE-mRNA-splicing facto 100.0 1.6E-27 5.4E-32 251.5 29.1 195 229-445 42-246 (343)
128 1nir_A Nitrite reductase; hemo 100.0 7.9E-26 2.7E-30 251.6 34.0 335 183-695 144-521 (543)
129 2w18_A PALB2, fancn, partner a 99.9 1.5E-26 5.2E-31 231.9 21.4 219 175-442 110-356 (356)
130 1nir_A Nitrite reductase; hemo 99.9 2.5E-24 8.4E-29 239.6 37.7 314 280-770 145-517 (543)
131 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.6E-24 5.5E-29 233.9 29.3 304 175-525 61-408 (415)
132 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.5E-24 8.5E-29 232.4 25.8 298 272-748 62-410 (415)
133 1xfd_A DIP, dipeptidyl aminope 99.9 1E-23 3.4E-28 246.6 29.5 232 178-444 18-290 (723)
134 2ecf_A Dipeptidyl peptidase IV 99.9 2.5E-22 8.5E-27 235.4 33.2 201 223-444 36-322 (741)
135 2ecf_A Dipeptidyl peptidase IV 99.9 5E-22 1.7E-26 232.8 32.4 317 176-535 36-445 (741)
136 2ojh_A Uncharacterized protein 99.9 1.3E-21 4.3E-26 201.2 25.1 259 194-492 17-293 (297)
137 3u4y_A Uncharacterized protein 99.9 1.8E-20 6E-25 196.4 34.3 299 278-769 3-306 (331)
138 1ri6_A Putative isomerase YBHE 99.9 5.8E-21 2E-25 201.1 27.8 311 190-525 6-333 (343)
139 2z3z_A Dipeptidyl aminopeptida 99.9 2.8E-20 9.6E-25 216.5 31.5 268 180-493 29-378 (706)
140 3u4y_A Uncharacterized protein 99.9 5.3E-20 1.8E-24 192.8 29.3 288 182-499 3-302 (331)
141 3vgz_A Uncharacterized protein 99.9 9.2E-20 3.1E-24 192.8 31.3 276 176-492 40-335 (353)
142 2ojh_A Uncharacterized protein 99.9 1E-20 3.6E-25 194.4 23.3 239 174-433 39-292 (297)
143 1ri6_A Putative isomerase YBHE 99.9 6.3E-20 2.1E-24 193.2 25.9 258 174-443 35-308 (343)
144 2oit_A Nucleoporin 214KDA; NH2 99.9 3.1E-20 1.1E-24 200.9 22.6 258 177-442 37-332 (434)
145 3hfq_A Uncharacterized protein 99.8 9.9E-20 3.4E-24 192.1 25.4 258 175-443 38-317 (347)
146 1z68_A Fibroblast activation p 99.8 6.5E-20 2.2E-24 213.9 26.2 191 227-440 19-284 (719)
147 2z3z_A Dipeptidyl aminopeptida 99.8 2E-19 7E-24 209.3 30.3 275 176-492 81-422 (706)
148 2oit_A Nucleoporin 214KDA; NH2 99.8 7.6E-19 2.6E-23 190.0 28.6 210 223-444 36-279 (434)
149 1xfd_A DIP, dipeptidyl aminope 99.8 6.8E-19 2.3E-23 205.5 28.5 281 178-493 62-432 (723)
150 3o4h_A Acylamino-acid-releasin 99.8 3.6E-19 1.2E-23 202.0 22.9 261 176-492 21-302 (582)
151 3scy_A Hypothetical bacterial 99.8 6.1E-18 2.1E-22 179.4 30.4 294 104-443 12-337 (361)
152 3hfq_A Uncharacterized protein 99.8 6.2E-18 2.1E-22 178.3 30.1 279 197-499 14-315 (347)
153 1z68_A Fibroblast activation p 99.8 8.2E-19 2.8E-23 204.6 25.2 314 181-536 20-431 (719)
154 3o4h_A Acylamino-acid-releasin 99.8 5.3E-18 1.8E-22 192.3 29.0 264 319-767 21-315 (582)
155 4a5s_A Dipeptidyl peptidase 4 99.8 1.5E-17 5.1E-22 193.8 33.6 190 223-443 16-237 (740)
156 1pby_B Quinohemoprotein amine 99.8 3.8E-18 1.3E-22 178.9 25.8 296 286-695 2-317 (337)
157 3vgz_A Uncharacterized protein 99.8 2E-17 6.9E-22 174.7 31.4 273 223-535 40-334 (353)
158 3scy_A Hypothetical bacterial 99.8 5.4E-17 1.8E-21 172.1 33.2 280 196-498 24-334 (361)
159 1pby_B Quinohemoprotein amine 99.8 1E-17 3.6E-22 175.6 24.4 264 190-502 2-311 (337)
160 3pe7_A Oligogalacturonate lyas 99.8 7.2E-17 2.5E-21 173.0 28.5 150 586-767 186-382 (388)
161 4a5s_A Dipeptidyl peptidase 4 99.8 2.1E-16 7.1E-21 184.2 34.5 373 177-622 17-451 (740)
162 1jmx_B Amine dehydrogenase; ox 99.8 5.3E-17 1.8E-21 171.1 26.1 156 277-445 4-177 (349)
163 3pe7_A Oligogalacturonate lyas 99.7 1.2E-16 4.1E-21 171.3 24.0 285 172-497 26-378 (388)
164 1jof_A Carboxy-CIS,CIS-muconat 99.7 1.6E-16 5.5E-21 168.5 21.9 251 177-444 40-342 (365)
165 1jmx_B Amine dehydrogenase; ox 99.7 8.9E-16 3E-20 161.7 23.6 234 228-501 4-325 (349)
166 3azo_A Aminopeptidase; POP fam 99.7 1.3E-15 4.5E-20 175.6 26.2 210 217-442 17-271 (662)
167 3c5m_A Oligogalacturonate lyas 99.7 7.9E-16 2.7E-20 165.3 21.0 293 321-766 37-381 (396)
168 3fvz_A Peptidyl-glycine alpha- 99.7 1.7E-14 5.8E-19 150.3 28.8 244 176-444 23-323 (329)
169 3azo_A Aminopeptidase; POP fam 99.7 1E-14 3.6E-19 168.1 29.1 246 171-442 18-322 (662)
170 1q7f_A NHL, brain tumor CG1071 99.7 5.9E-14 2E-18 143.1 30.5 244 174-444 27-281 (286)
171 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.1E-14 7E-19 152.2 27.2 284 191-500 4-340 (365)
172 3c5m_A Oligogalacturonate lyas 99.6 2.6E-15 9E-20 161.2 17.7 275 179-498 38-379 (396)
173 2oiz_A Aromatic amine dehydrog 99.6 2.3E-14 7.9E-19 150.9 22.8 137 293-443 29-182 (361)
174 2dg1_A DRP35, lactonase; beta 99.6 2.2E-13 7.5E-18 142.3 24.8 271 177-492 6-301 (333)
175 2xdw_A Prolyl endopeptidase; a 99.6 2.1E-13 7.2E-18 158.1 27.0 252 174-445 122-416 (710)
176 2oiz_A Aromatic amine dehydrog 99.6 8.2E-13 2.8E-17 139.0 27.2 289 197-526 29-359 (361)
177 2bkl_A Prolyl endopeptidase; m 99.6 1.4E-13 5E-18 158.9 23.2 252 174-445 118-399 (695)
178 1qks_A Cytochrome CD1 nitrite 99.6 1.2E-11 4.3E-16 136.7 37.5 239 188-444 166-422 (567)
179 2dg1_A DRP35, lactonase; beta 99.6 2.3E-12 8E-17 134.5 30.1 235 174-433 42-300 (333)
180 1qks_A Cytochrome CD1 nitrite 99.6 3.6E-11 1.2E-15 133.0 40.9 317 333-770 168-541 (567)
181 1q7f_A NHL, brain tumor CG1071 99.6 3.3E-12 1.1E-16 130.0 30.0 242 220-501 26-280 (286)
182 1rwi_B Serine/threonine-protei 99.6 2.6E-12 8.8E-17 129.6 28.7 239 178-444 25-265 (270)
183 3e5z_A Putative gluconolactona 99.5 1E-12 3.6E-17 134.6 24.5 239 174-444 25-287 (296)
184 2gop_A Trilobed protease; beta 99.5 7.9E-13 2.7E-17 139.0 24.0 255 177-498 15-328 (347)
185 2z2n_A Virginiamycin B lyase; 99.5 7E-11 2.4E-15 120.9 36.3 283 174-500 12-294 (299)
186 3fvz_A Peptidyl-glycine alpha- 99.5 2.6E-11 9E-16 126.0 32.1 238 223-499 23-320 (329)
187 3e5z_A Putative gluconolactona 99.5 9E-12 3.1E-16 127.5 26.5 239 219-499 23-284 (296)
188 2gop_A Trilobed protease; beta 99.5 1.4E-12 4.9E-17 137.0 20.4 223 177-442 59-330 (347)
189 2bkl_A Prolyl endopeptidase; m 99.5 1.6E-11 5.6E-16 141.7 30.7 163 270-444 118-305 (695)
190 2xdw_A Prolyl endopeptidase; a 99.4 3.2E-11 1.1E-15 139.7 28.8 241 220-491 121-400 (710)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.4 3.7E-11 1.3E-15 124.1 25.2 251 175-444 16-300 (314)
192 2qc5_A Streptogramin B lactona 99.4 9.3E-10 3.2E-14 112.5 34.0 279 175-498 18-297 (300)
193 1rwi_B Serine/threonine-protei 99.4 1.2E-10 4.2E-15 117.2 25.4 235 225-498 25-261 (270)
194 2z2n_A Virginiamycin B lyase; 99.4 1.9E-09 6.5E-14 110.1 33.9 271 219-533 10-282 (299)
195 1yr2_A Prolyl oligopeptidase; 99.4 3.4E-11 1.2E-15 140.0 23.2 249 174-444 160-442 (741)
196 3no2_A Uncharacterized protein 99.4 1.1E-10 3.8E-15 117.3 23.8 218 188-431 4-231 (276)
197 2mad_H Methylamine dehydrogena 99.3 3E-09 1E-13 111.8 34.9 146 281-445 29-197 (373)
198 3g4e_A Regucalcin; six bladed 99.3 2.2E-10 7.4E-15 117.1 25.0 232 179-432 15-262 (297)
199 3hrp_A Uncharacterized protein 99.3 4.8E-10 1.6E-14 119.7 27.3 239 177-441 131-408 (409)
200 3dsm_A Uncharacterized protein 99.3 2.5E-10 8.6E-15 118.4 23.9 237 177-442 44-301 (328)
201 1xip_A Nucleoporin NUP159; bet 99.3 3E-11 1E-15 125.6 14.6 178 178-383 39-230 (388)
202 1xip_A Nucleoporin NUP159; bet 99.3 6.6E-11 2.3E-15 122.9 17.0 177 225-430 39-231 (388)
203 3dsm_A Uncharacterized protein 99.3 1.1E-09 3.7E-14 113.5 25.7 252 197-489 15-285 (328)
204 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 3.2E-09 1.1E-13 109.3 29.0 164 269-442 14-206 (314)
205 2ghs_A AGR_C_1268P; regucalcin 99.2 2E-09 6.9E-14 111.4 26.5 226 179-433 51-293 (326)
206 1yr2_A Prolyl oligopeptidase; 99.2 6.1E-10 2.1E-14 129.5 25.0 275 185-491 115-427 (741)
207 3iuj_A Prolyl endopeptidase; h 99.2 7E-10 2.4E-14 127.7 23.9 247 174-444 126-406 (693)
208 2qc5_A Streptogramin B lactona 99.2 2.9E-08 9.8E-13 101.3 33.2 271 221-534 17-289 (300)
209 4a2l_A BT_4663, two-component 99.2 2E-06 6.7E-11 100.8 53.1 482 177-769 43-573 (795)
210 2mad_H Methylamine dehydrogena 99.2 2.2E-08 7.6E-13 105.1 32.4 274 184-501 28-350 (373)
211 4a2l_A BT_4663, two-component 99.2 2E-06 6.7E-11 100.8 50.7 489 176-768 87-615 (795)
212 3no2_A Uncharacterized protein 99.2 9.3E-09 3.2E-13 103.2 25.4 187 233-445 3-197 (276)
213 3c75_H MADH, methylamine dehyd 99.1 3.9E-09 1.3E-13 111.3 22.5 134 295-444 99-249 (426)
214 3g4e_A Regucalcin; six bladed 99.1 1.3E-08 4.4E-13 103.8 25.5 233 225-493 14-264 (297)
215 3v9f_A Two-component system se 99.1 4.5E-05 1.5E-09 89.0 58.3 494 177-766 66-610 (781)
216 3sjl_D Methylamine dehydrogena 99.1 8.8E-09 3E-13 106.5 23.1 243 182-445 83-365 (386)
217 3dr2_A Exported gluconolactona 99.1 6.3E-09 2.2E-13 106.6 21.4 232 175-440 43-303 (305)
218 3sjl_D Methylamine dehydrogena 99.1 1.5E-08 5.3E-13 104.6 23.5 277 184-502 40-364 (386)
219 3hrp_A Uncharacterized protein 99.1 2.8E-08 9.6E-13 105.9 25.5 202 224-444 131-355 (409)
220 2ghs_A AGR_C_1268P; regucalcin 99.0 9.4E-08 3.2E-12 98.8 27.9 228 226-493 51-294 (326)
221 3iuj_A Prolyl endopeptidase; h 99.0 1.1E-08 3.9E-13 117.5 23.0 236 221-491 126-391 (693)
222 3v9f_A Two-component system se 99.0 2.6E-05 8.9E-10 91.0 51.4 489 177-766 115-655 (781)
223 3c75_H MADH, methylamine dehyd 99.0 2.3E-08 7.9E-13 105.4 20.2 264 199-502 99-403 (426)
224 3dr2_A Exported gluconolactona 99.0 6.9E-08 2.3E-12 98.8 23.0 236 219-496 40-301 (305)
225 2qe8_A Uncharacterized protein 98.9 7.1E-08 2.4E-12 100.5 20.3 249 177-439 17-317 (343)
226 1yiq_A Quinohemoprotein alcoho 98.8 4.1E-07 1.4E-11 103.8 25.7 194 235-445 70-340 (689)
227 1mda_H Methylamine dehydrogena 98.8 6.6E-08 2.2E-12 100.3 16.5 223 200-445 47-348 (368)
228 1mda_H Methylamine dehydrogena 98.8 6.4E-08 2.2E-12 100.3 15.3 129 296-443 47-194 (368)
229 2hz6_A Endoplasmic reticulum t 98.8 2.5E-09 8.5E-14 112.6 4.4 201 188-422 8-214 (369)
230 2qe8_A Uncharacterized protein 98.7 5.5E-07 1.9E-11 93.7 20.9 243 224-490 17-309 (343)
231 3hxj_A Pyrrolo-quinoline quino 98.6 1.3E-06 4.3E-11 90.4 19.4 286 189-537 30-315 (330)
232 1npe_A Nidogen, entactin; glyc 98.6 4E-05 1.4E-09 76.3 29.5 233 190-444 2-239 (267)
233 2ece_A 462AA long hypothetical 98.6 1.6E-06 5.4E-11 90.1 18.9 233 183-431 88-399 (462)
234 1npe_A Nidogen, entactin; glyc 98.5 0.00011 3.9E-09 72.9 30.4 193 237-444 3-199 (267)
235 3hxj_A Pyrrolo-quinoline quino 98.5 2.9E-06 9.7E-11 87.7 19.2 261 178-499 61-321 (330)
236 3s94_A LRP-6, low-density lipo 98.5 0.0028 9.5E-08 70.8 54.2 200 177-397 40-243 (619)
237 1yiq_A Quinohemoprotein alcoho 98.5 6.8E-06 2.3E-10 93.7 23.1 239 188-445 120-507 (689)
238 2ece_A 462AA long hypothetical 98.5 5.6E-05 1.9E-09 78.6 27.0 235 228-489 86-399 (462)
239 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00014 4.7E-09 76.6 30.6 128 599-764 239-375 (376)
240 3q7m_A Lipoprotein YFGL, BAMB; 98.5 0.00033 1.1E-08 73.6 33.4 146 286-445 54-209 (376)
241 2fp8_A Strictosidine synthase; 98.5 1.1E-05 3.7E-10 83.0 21.2 243 177-444 19-314 (322)
242 1kb0_A Quinohemoprotein alcoho 98.4 1.2E-05 4.2E-10 91.3 22.7 237 188-445 127-509 (677)
243 2hz6_A Endoplasmic reticulum t 98.4 4.5E-08 1.5E-12 102.9 1.8 183 234-445 8-194 (369)
244 2p4o_A Hypothetical protein; p 98.4 5.9E-05 2E-09 76.8 24.6 233 177-431 32-277 (306)
245 4a0p_A LRP6, LRP-6, low-densit 98.4 0.007 2.4E-07 67.6 59.6 199 176-397 36-237 (628)
246 2iwa_A Glutamine cyclotransfer 98.3 2.9E-05 9.8E-10 75.8 18.5 197 225-444 22-238 (266)
247 1kb0_A Quinohemoprotein alcoho 98.3 4.9E-05 1.7E-09 86.4 23.0 200 189-408 77-354 (677)
248 1fwx_A Nitrous oxide reductase 98.3 9.6E-06 3.3E-10 87.5 15.7 97 329-433 99-215 (595)
249 3s94_A LRP-6, low-density lipo 98.3 0.012 4E-07 65.8 55.7 225 198-445 17-245 (619)
250 2iwa_A Glutamine cyclotransfer 98.3 2.2E-05 7.6E-10 76.6 16.2 199 178-397 22-237 (266)
251 3nol_A Glutamine cyclotransfer 98.2 2.5E-05 8.6E-10 75.1 15.9 184 226-430 45-243 (262)
252 1fwx_A Nitrous oxide reductase 98.2 2.9E-05 9.9E-10 83.8 18.1 239 188-444 100-432 (595)
253 3v64_C Agrin; beta propeller, 98.2 0.0031 1.1E-07 65.1 32.4 240 177-444 34-276 (349)
254 3qqz_A Putative uncharacterize 98.2 0.00073 2.5E-08 65.4 25.2 209 268-497 22-249 (255)
255 4a0p_A LRP6, LRP-6, low-densit 98.2 0.017 5.7E-07 64.6 54.2 183 243-444 13-198 (628)
256 2xe4_A Oligopeptidase B; hydro 98.2 0.00024 8.4E-09 82.0 24.9 253 174-444 170-459 (751)
257 2fp8_A Strictosidine synthase; 98.2 0.0013 4.6E-08 67.2 28.1 200 224-442 19-268 (322)
258 3v64_C Agrin; beta propeller, 98.1 0.0098 3.3E-07 61.3 34.3 181 244-444 52-235 (349)
259 3v65_B Low-density lipoprotein 98.1 0.0024 8.1E-08 67.1 29.3 238 179-444 79-319 (386)
260 3nok_A Glutaminyl cyclase; bet 98.1 0.00013 4.4E-09 70.2 17.2 183 179-384 57-253 (268)
261 3nok_A Glutaminyl cyclase; bet 98.1 0.00016 5.5E-09 69.5 17.8 184 226-431 57-254 (268)
262 1k3i_A Galactose oxidase precu 98.1 0.00018 6.1E-09 81.9 21.7 116 324-444 190-324 (656)
263 3v65_B Low-density lipoprotein 98.1 0.0092 3.1E-07 62.5 33.0 182 243-444 94-278 (386)
264 3nol_A Glutamine cyclotransfer 98.0 9.7E-05 3.3E-09 71.0 15.0 199 167-386 32-244 (262)
265 2xbg_A YCF48-like protein; pho 98.0 0.012 4E-07 60.1 31.3 240 177-442 36-277 (327)
266 3qqz_A Putative uncharacterize 98.0 0.0075 2.6E-07 58.3 27.2 207 217-440 20-250 (255)
267 4hw6_A Hypothetical protein, I 97.9 0.0018 6.1E-08 69.0 24.7 245 177-442 139-432 (433)
268 3mbr_X Glutamine cyclotransfer 97.9 0.0004 1.4E-08 66.2 17.1 185 225-431 22-223 (243)
269 2xbg_A YCF48-like protein; pho 97.9 0.004 1.4E-07 63.7 26.2 237 177-441 80-320 (327)
270 3ei3_A DNA damage-binding prot 97.9 0.096 3.3E-06 62.7 49.5 511 176-767 425-999 (1158)
271 3p5b_L Low density lipoprotein 97.9 0.0087 3E-07 63.0 28.7 224 176-417 111-337 (400)
272 2xe4_A Oligopeptidase B; hydro 97.9 0.00046 1.6E-08 79.7 20.4 205 220-441 169-398 (751)
273 3p5b_L Low density lipoprotein 97.9 0.038 1.3E-06 58.1 33.4 186 243-444 90-278 (400)
274 2p4o_A Hypothetical protein; p 97.9 0.0073 2.5E-07 61.1 26.9 231 225-491 33-278 (306)
275 1ijq_A LDL receptor, low-densi 97.9 0.0059 2E-07 62.1 26.1 205 177-396 30-237 (316)
276 1ijq_A LDL receptor, low-densi 97.9 0.033 1.1E-06 56.4 32.7 181 245-444 10-196 (316)
277 3tc9_A Hypothetical hydrolase; 97.8 0.0018 6E-08 69.1 22.4 245 177-442 137-429 (430)
278 3mbr_X Glutamine cyclotransfer 97.8 0.00081 2.8E-08 64.1 17.4 200 163-385 6-222 (243)
279 3ei3_A DNA damage-binding prot 97.8 0.12 4.2E-06 61.8 51.8 114 320-443 514-636 (1158)
280 3sov_A LRP-6, low-density lipo 97.8 0.036 1.2E-06 56.1 30.0 184 244-444 12-198 (318)
281 1kv9_A Type II quinohemoprotei 97.8 0.0025 8.5E-08 72.3 23.5 200 189-405 66-338 (668)
282 1k3i_A Galactose oxidase precu 97.7 0.0011 3.6E-08 75.4 19.8 115 182-305 191-324 (656)
283 3m0c_C LDL receptor, low-densi 97.7 0.043 1.5E-06 62.8 32.6 186 243-444 402-590 (791)
284 1kv9_A Type II quinohemoprotei 97.7 0.0018 6E-08 73.5 21.2 237 189-445 117-490 (668)
285 1w6s_A Methanol dehydrogenase 97.7 0.016 5.4E-07 64.2 28.1 76 677-756 451-536 (599)
286 3sov_A LRP-6, low-density lipo 97.7 0.011 3.8E-07 59.9 24.6 200 177-396 35-237 (318)
287 1flg_A Protein (quinoprotein e 97.7 0.079 2.7E-06 58.6 33.4 83 677-763 464-557 (582)
288 2ad6_A Methanol dehydrogenase 97.7 0.018 6.1E-07 63.8 28.2 77 677-757 442-528 (571)
289 2ad6_A Methanol dehydrogenase 97.6 0.0051 1.8E-07 68.1 21.5 236 189-445 115-496 (571)
290 1flg_A Protein (quinoprotein e 97.5 0.029 9.9E-07 62.2 27.3 54 387-445 465-518 (582)
291 3m0c_C LDL receptor, low-densi 97.5 0.03 1E-06 64.0 27.0 204 177-396 424-631 (791)
292 2xzh_A Clathrin heavy chain 1; 97.5 0.071 2.4E-06 52.5 25.1 240 182-445 72-334 (365)
293 3tc9_A Hypothetical hydrolase; 97.5 0.022 7.5E-07 60.6 24.2 156 225-396 138-300 (430)
294 3kya_A Putative phosphatase; s 97.5 0.024 8.4E-07 60.4 24.1 260 177-445 139-477 (496)
295 1w6s_A Methanol dehydrogenase 97.4 0.015 5.2E-07 64.4 23.3 54 387-445 452-505 (599)
296 1n7d_A LDL receptor, low-densi 97.4 0.0013 4.3E-08 74.9 14.1 205 177-396 406-613 (699)
297 4hw6_A Hypothetical protein, I 97.3 0.055 1.9E-06 57.4 24.3 200 225-441 140-372 (433)
298 2ism_A Putative oxidoreductase 97.2 0.035 1.2E-06 57.2 21.9 246 177-434 31-337 (352)
299 1bpo_A Protein (clathrin); cla 97.2 0.27 9.3E-06 50.5 26.4 240 182-445 71-333 (494)
300 3kya_A Putative phosphatase; s 97.2 0.18 6E-06 53.8 26.5 120 321-442 140-277 (496)
301 3amr_A 3-phytase; beta-propell 97.1 0.062 2.1E-06 54.0 21.4 198 233-442 38-262 (355)
302 3amr_A 3-phytase; beta-propell 97.1 0.093 3.2E-06 52.7 22.2 202 189-407 40-271 (355)
303 1n7d_A LDL receptor, low-densi 97.1 0.0035 1.2E-07 71.3 13.4 224 199-444 386-615 (699)
304 2g8s_A Glucose/sorbosone dehyd 97.1 0.064 2.2E-06 55.2 22.0 240 177-428 18-338 (353)
305 2p9w_A MAL S 1 allergenic prot 97.1 0.028 9.5E-07 56.0 18.0 203 181-397 17-265 (334)
306 3das_A Putative oxidoreductase 97.0 0.27 9.3E-06 49.8 24.8 253 176-434 31-330 (347)
307 3a9g_A Putative uncharacterize 96.9 0.17 5.7E-06 52.0 23.4 242 177-430 29-329 (354)
308 2p9w_A MAL S 1 allergenic prot 96.9 0.028 9.5E-07 56.0 16.3 160 273-443 13-215 (334)
309 2ism_A Putative oxidoreductase 96.7 0.34 1.2E-05 49.7 24.0 110 272-385 30-153 (352)
310 3sre_A PON1, serum paraoxonase 96.4 0.22 7.5E-06 50.7 19.6 200 182-395 55-296 (355)
311 3a9g_A Putative uncharacterize 96.4 0.98 3.3E-05 46.2 24.8 110 272-385 28-153 (354)
312 3sre_A PON1, serum paraoxonase 96.2 0.5 1.7E-05 48.1 20.6 176 243-432 81-286 (355)
313 2g8s_A Glucose/sorbosone dehyd 96.1 1.5 5.1E-05 44.8 25.0 248 225-498 19-349 (353)
314 3pbp_A Nucleoporin NUP82; beta 96.0 0.5 1.7E-05 48.6 19.3 115 274-392 67-207 (452)
315 2cn3_A Xyloglucanase, beta-1,4 96.0 3.2 0.00011 47.4 38.6 112 224-340 23-152 (737)
316 1xi4_A Clathrin heavy chain; a 95.7 0.6 2E-05 55.6 20.7 233 184-442 73-330 (1630)
317 3ott_A Two-component system se 95.6 4.5 0.00015 46.4 53.5 489 176-768 21-546 (758)
318 3pbp_A Nucleoporin NUP82; beta 95.4 2.2 7.6E-05 43.9 21.2 147 281-438 29-207 (452)
319 2vpj_A Kelch-like protein 12; 95.2 1.1 3.8E-05 44.5 18.9 235 188-444 14-279 (301)
320 2xn4_A Kelch-like protein 2; s 94.9 1.3 4.4E-05 44.1 18.5 231 189-444 16-277 (302)
321 1cru_A Protein (soluble quinop 94.9 2 7E-05 45.5 20.7 113 272-385 26-162 (454)
322 1cru_A Protein (soluble quinop 94.9 4.8 0.00016 42.6 25.5 112 176-291 26-161 (454)
323 1tl2_A L10, protein (tachylect 94.8 0.58 2E-05 43.3 13.5 158 177-350 41-207 (236)
324 1tl2_A L10, protein (tachylect 94.7 1.2 4E-05 41.3 15.4 107 273-392 41-158 (236)
325 3ii7_A Kelch-like protein 7; p 94.4 2.5 8.5E-05 42.0 19.2 230 190-444 13-273 (306)
326 3das_A Putative oxidoreductase 94.4 4.8 0.00017 40.6 27.6 115 270-385 29-158 (347)
327 2xzh_A Clathrin heavy chain 1; 94.3 4.5 0.00015 40.0 29.0 251 387-707 48-309 (365)
328 1zgk_A Kelch-like ECH-associat 94.3 2.3 7.9E-05 42.3 18.6 232 188-444 24-288 (308)
329 4asc_A Kelch repeat and BTB do 93.8 1.6 5.5E-05 43.6 16.3 185 191-397 7-221 (315)
330 2cn3_A Xyloglucanase, beta-1,4 93.7 12 0.0004 42.6 44.4 247 177-433 23-322 (737)
331 3b7f_A Glycosyl hydrolase, BNR 93.2 8.8 0.0003 39.7 28.4 250 177-437 55-366 (394)
332 3ott_A Two-component system se 92.6 17 0.00059 41.4 53.5 473 178-762 104-622 (758)
333 3s25_A Hypothetical 7-bladed b 92.1 5.8 0.0002 39.2 17.1 177 229-440 109-290 (302)
334 2vpj_A Kelch-like protein 12; 92.0 4.9 0.00017 39.6 16.8 190 188-397 62-278 (301)
335 1bpo_A Protein (clathrin); cla 91.9 13 0.00045 38.4 31.5 219 198-444 47-290 (494)
336 2xn4_A Kelch-like protein 2; s 91.4 4.8 0.00017 39.7 16.0 189 188-397 61-276 (302)
337 2uvk_A YJHT; unknown function, 91.3 10 0.00034 38.5 18.7 65 188-255 19-96 (357)
338 2woz_A Kelch repeat and BTB do 91.2 6.2 0.00021 39.3 16.7 103 286-397 111-231 (318)
339 1xi4_A Clathrin heavy chain; a 90.9 31 0.0011 41.5 23.3 220 198-445 47-291 (1630)
340 3ii7_A Kelch-like protein 7; p 90.5 6.2 0.00021 39.0 15.8 189 188-397 55-272 (306)
341 1zgk_A Kelch-like ECH-associat 89.0 8.2 0.00028 38.2 15.3 188 188-396 70-286 (308)
342 2zwa_A Leucine carboxyl methyl 87.5 19 0.00064 40.5 18.5 201 188-397 397-635 (695)
343 3s25_A Hypothetical 7-bladed b 84.3 33 0.0011 33.7 19.8 121 594-754 110-240 (302)
344 2wg3_C Hedgehog-interacting pr 83.3 18 0.00062 38.2 14.7 116 273-388 14-160 (463)
345 2uvk_A YJHT; unknown function, 83.3 19 0.00063 36.4 14.7 23 188-210 65-97 (357)
346 3b7f_A Glycosyl hydrolase, BNR 81.6 50 0.0017 33.8 31.4 228 189-431 22-297 (394)
347 4asc_A Kelch repeat and BTB do 80.9 43 0.0015 32.9 16.1 179 245-444 13-222 (315)
348 2wg3_C Hedgehog-interacting pr 78.3 71 0.0024 33.6 28.7 114 177-292 14-157 (463)
349 2zwa_A Leucine carboxyl methyl 75.3 56 0.0019 36.6 16.4 153 283-444 451-636 (695)
350 2woz_A Kelch repeat and BTB do 72.1 77 0.0026 31.0 17.3 179 188-387 56-263 (318)
351 1sqj_A OXG-RCBH, oligoxylogluc 71.5 1.4E+02 0.0049 33.9 40.0 158 223-387 14-190 (789)
352 3qhy_B Beta-lactamase inhibito 70.6 79 0.0027 30.5 21.6 223 178-444 25-247 (282)
353 4hvt_A Ritya.17583.B, post-pro 67.8 1.6E+02 0.0054 32.9 21.1 242 184-442 137-429 (711)
354 3sbq_A Nitrous-oxide reductase 58.1 35 0.0012 36.4 9.1 89 584-688 319-408 (638)
355 3uc1_A DNA gyrase subunit A; D 57.7 1.5E+02 0.0052 29.3 21.9 249 190-444 4-280 (327)
356 3l6v_A GYRA, DNA gyrase subuni 50.0 2.2E+02 0.0074 28.7 22.0 250 188-443 6-316 (370)
357 3sbq_A Nitrous-oxide reductase 46.1 50 0.0017 35.4 7.9 76 321-397 324-408 (638)
358 2be1_A Serine/threonine-protei 43.8 36 0.0012 34.0 6.4 116 286-409 11-139 (339)
359 2be1_A Serine/threonine-protei 43.4 68 0.0023 32.0 8.3 24 700-723 110-133 (339)
360 4gq2_M Nucleoporin NUP120; bet 41.9 4.7E+02 0.016 30.4 19.2 32 224-255 236-267 (950)
361 4gq2_M Nucleoporin NUP120; bet 41.6 93 0.0032 36.3 10.4 32 737-769 237-268 (950)
362 3zwu_A Alkaline phosphatase PH 37.8 52 0.0018 35.8 6.9 18 736-753 531-548 (592)
363 3q6k_A 43.2 kDa salivary prote 36.9 3.4E+02 0.012 27.4 21.2 124 273-396 152-305 (381)
364 1sqj_A OXG-RCBH, oligoxylogluc 36.2 5.2E+02 0.018 29.2 40.4 157 272-433 14-190 (789)
365 1suu_A DNA gyrase subunit A; t 36.0 3.2E+02 0.011 26.7 26.3 207 188-398 7-232 (312)
366 4hvt_A Ritya.17583.B, post-pro 27.5 6.7E+02 0.023 27.8 23.6 199 276-494 132-371 (711)
367 4fhn_B Nucleoporin NUP120; pro 25.9 1.2E+02 0.0041 36.3 8.0 32 737-769 239-270 (1139)
368 3q6k_A 43.2 kDa salivary prote 25.9 5.2E+02 0.018 26.0 21.9 125 319-443 151-306 (381)
369 3uc1_A DNA gyrase subunit A; D 24.5 5.1E+02 0.017 25.4 26.6 214 177-396 42-278 (327)
370 3a0f_A Xyloglucanase; beta-pro 21.9 8.6E+02 0.03 27.1 23.6 245 177-441 487-760 (763)
371 3mez_B Mannose-specific lectin 21.1 3.1E+02 0.011 21.7 8.0 15 703-717 91-105 (113)
372 4a9v_A PHOX; hydrolase, beta-p 21.1 1.6E+02 0.0055 31.7 6.8 55 695-754 481-548 (592)
373 3zwu_A Alkaline phosphatase PH 20.1 2.1E+02 0.0073 31.0 7.7 59 275-338 478-549 (592)
No 1
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8e-60 Score=538.75 Aligned_cols=525 Identities=14% Similarity=0.165 Sum_probs=391.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+.+.+.+++|+| +|++||+++ ++.|+||++.++. ....+.+|...|++++|+|+|++||+|+.|++|+|||+.
T Consensus 16 ~~~g~~~~~~~sp-dg~~l~~~~-~~~v~l~~~~~~~----~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~ 89 (611)
T 1nr0_A 16 TARGTAVVLGNTP-AGDKIQYCN-GTSVYTVPVGSLT----DTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTT 89 (611)
T ss_dssp CCTTCCCCCEECT-TSSEEEEEE-TTEEEEEETTCSS----CCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESS
T ss_pred cccCceeEEeeCC-CCCEEEeCC-CCEEEEecCCCcc----cCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECC
Confidence 3567788899999 999999998 5699999998766 667789999999999999999999999999999999997
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
++ .......+.+|.+.|.+++|+|++ .+|++++.+ +.|++||. +. ....+.+|...|++++|+|
T Consensus 90 ~~-----~~~~~~~~~~~~~~v~~v~fs~dg-~~l~~~~~~~~~~~~v~~wd~--~~----~~~~l~gh~~~v~~v~f~p 157 (611)
T 1nr0_A 90 QT-----THILKTTIPVFSGPVKDISWDSES-KRIAAVGEGRERFGHVFLFDT--GT----SNGNLTGQARAMNSVDFKP 157 (611)
T ss_dssp ST-----TCCEEEEEECSSSCEEEEEECTTS-CEEEEEECCSSCSEEEEETTT--CC----BCBCCCCCSSCEEEEEECS
T ss_pred CC-----cceeeEeecccCCceEEEEECCCC-CEEEEEECCCCceeEEEEeeC--CC----CcceecCCCCCceEEEECC
Confidence 64 224456788999999999999999 688877764 47888874 33 3567889999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK- 408 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~- 408 (812)
+++..|++|+.|++|++||.+. ..+...+ .+|...|++++|+|++++|++|+.|+.|++||++ .++.+..+.
T Consensus 158 ~~~~~l~s~s~D~~v~lwd~~~---~~~~~~l-~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~---~g~~~~~~~~ 230 (611)
T 1nr0_A 158 SRPFRIISGSDDNTVAIFEGPP---FKFKSTF-GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGV---DGTKTGVFED 230 (611)
T ss_dssp SSSCEEEEEETTSCEEEEETTT---BEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT---TCCEEEECBC
T ss_pred CCCeEEEEEeCCCeEEEEECCC---CeEeeee-ccccCceEEEEECCCCCEEEEEECCCcEEEEECC---CCcEeeeecc
Confidence 9986799999999999999873 4455566 7899999999999999999999999999999997 466677773
Q ss_pred ------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc-------------------------
Q psy4510 409 ------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK------------------------- 457 (812)
Q Consensus 409 ------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~------------------------- 457 (812)
+|.+.|.+++|+|++ .+|++++.|++|++||+.+.+............
T Consensus 231 ~~~~~~~h~~~V~~v~~spdg-~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~ 309 (611)
T 1nr0_A 231 DSLKNVAHSGSVFGLTWSPDG-TKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFV 309 (611)
T ss_dssp TTSSSCSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEE
T ss_pred ccccccccCCCEEEEEECCCC-CEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEE
Confidence 799999999999997 699999999999999998764321000000000
Q ss_pred c-CCCce-EEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 458 D-LPSQL-LFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 458 ~-~~~~~-~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+ ..... .....+...|.+++|+|++. .+++++.++ +.+|+..... ........+...|.+++|+++ +.+++.+
T Consensus 310 ~~~~~~~~~~~~gh~~~v~~l~~spdg~-~l~s~s~D~~v~~Wd~~~~~-~~~~~~~~h~~~v~~~~~s~~--~~l~s~s 385 (611)
T 1nr0_A 310 NPELGSIDQVRYGHNKAITALSSSADGK-TLFSADAEGHINSWDISTGI-SNRVFPDVHATMITGIKTTSK--GDLFTVS 385 (611)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTTCC-EEECSSCSCSSCEEEEEECTT--SCEEEEE
T ss_pred eCCCCCcceEEcCCCCCEEEEEEeCCCC-EEEEEeCCCcEEEEECCCCc-eeeecccCCcceEEEEEECCC--CcEEEEE
Confidence 0 00011 12223455899999999986 455555554 5666544332 222222345678999999987 5666666
Q ss_pred CCCceEEEEeecccCccccccccc----ccc------cccCCC------CCCccccCCCccceEEecccceEEEEEEecc
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNER----ELE------DDESEG------SGDEDRRKDPVMNSYFIRHRGCINRVRTCQY 598 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~----~~~------~~~~~~------~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~ 598 (812)
.++. +.+|++......... .+. ....++ ............ .....|...+.+++|+|+
T Consensus 386 ~d~~-----v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~-~~~~~~~~~v~~va~spd 459 (611)
T 1nr0_A 386 WDDH-----LKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGK-LTEVPISYNSSCVALSND 459 (611)
T ss_dssp TTTE-----EEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTE-EEEEECSSCEEEEEECTT
T ss_pred cCCc-----eEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCc-eeeeecCCCceEEEEeCC
Confidence 5532 223332221110000 000 000000 000000000000 112246778999999999
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
|++|++| +.|++|++|++.+.... .+.. .+|...|++++|+| ++++|++++.|
T Consensus 460 g~~lasg--s~D~~v~lwd~~~~~~~-----------------------~~~~-~~h~~~v~~v~fsp-dg~~las~s~d 512 (611)
T 1nr0_A 460 KQFVAVG--GQDSKVHVYKLSGASVS-----------------------EVKT-IVHPAEITSVAFSN-NGAFLVATDQS 512 (611)
T ss_dssp SCEEEEE--ETTSEEEEEEEETTEEE-----------------------EEEE-EECSSCEEEEEECT-TSSEEEEEETT
T ss_pred CCEEEEe--CCCCeEEEEEccCCcee-----------------------eeec-cCCCCceEEEEECC-CCCEEEEEcCC
Confidence 9999999 89999999999875310 2233 68999999999999 89999999999
Q ss_pred ceEEEEecCC-Cc------------eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccc-ccccCC-CcceeEeEE
Q psy4510 679 RNIHIWTPRE-AG------------AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGH-TNSVEDLQW 743 (812)
Q Consensus 679 g~v~iWd~~~-~~------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~-~~~~gH-~~~V~~l~f 743 (812)
++|++|++.+ ++ .+..++|+|||++||+|+.|++|++|++.++.. .. ..+.+| ...|++++|
T Consensus 513 ~~v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~~~~---~~~~~~~~h~~~~v~~v~f 589 (611)
T 1nr0_A 513 RKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSVIVWNMNKPSD---HPIIIKGAHAMSSVNSVIW 589 (611)
T ss_dssp SCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCTTS---CCEEETTSSTTSCEEEEEE
T ss_pred CCEEEEEcCCCCceeeeeeeeecccceeEEEECCCCCEEEEEECCCcEEEEECCCccc---ccchhhccCcccCeeEEEE
Confidence 9999999975 21 244567999999999999999999999988763 23 567899 899999999
Q ss_pred ecCCceeEEeeccCCceEEeeec
Q psy4510 744 SPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 744 s~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
+|+++ |+|+|.|++|++|++.
T Consensus 590 s~d~~--l~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 590 LNETT--IVSAGQDSNIKFWNVP 610 (611)
T ss_dssp EETTE--EEEEETTSCEEEEECC
T ss_pred cCCCE--EEEecCCCCEEEEecc
Confidence 99996 9999999999999973
No 2
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=2e-59 Score=534.53 Aligned_cols=508 Identities=18% Similarity=0.321 Sum_probs=407.4
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
...+.||.+.|+|++||| +|++||||+.|+.|+|||. +++ ....+.+|...|++++|+|++++|++++.|+.|+
T Consensus 9 ~~~L~GH~~~V~~~a~sp-dg~~las~~~d~~v~iWd~-~~~----~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~ 82 (577)
T 2ymu_A 9 RNRLEAHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVK 82 (577)
T ss_dssp EEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSC----EEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred eeEECCCCCcEEEEEECC-CCCEEEEEeCCCEEEEEEC-CCC----EEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEE
Confidence 344679999999999999 9999999999999999995 333 5678899999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcce-------------------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ------------------- 309 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~------------------- 309 (812)
+||... +++..+.+|.+.|.+++|+|++ .+|++++.|+.+++|+........
T Consensus 83 vWd~~~--------~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 153 (577)
T 2ymu_A 83 LWNRNG--------QLLQTLTGHSSSVRGVAFSPDG-QTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQT 153 (577)
T ss_dssp EEETTS--------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred EEECCC--------CEEEEEECCCCCEEEEEECCCC-CEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCcc
Confidence 999653 7788999999999999999999 899999999999999965431100
Q ss_pred -----------------eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 310 -----------------VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 310 -----------------~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
........|...|.+++|+|++. +|++++.||.|++||.. ...+..+ ..|...|.++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~~w~~~----~~~~~~~-~~~~~~v~~~ 227 (577)
T 2ymu_A 154 IASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWNRN----GQLLQTL-TGHSSSVRGV 227 (577)
T ss_dssp EEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEEECTT----SCEEEEE-ECCSSCEEEE
T ss_pred ceecccccceeccccceeeeeeccCCCcceeeeeecCCCC-EEEEEcCCCEEEEEeCC----CcEEEEE-ecCCCCEEEE
Confidence 00122345778899999999998 59999999999999964 3344555 7899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++++.|+.|++||. .++.+..+.+|...|++++|+|++ ..|++++.|+.|++||....
T Consensus 228 ~~s~dg~~l~~~~~d~~i~~w~~----~~~~~~~~~~~~~~v~~v~~~~d~-~~l~~~~~d~~i~~w~~~~~-------- 294 (577)
T 2ymu_A 228 AFSPDGQTIASASDDKTVKLWNR----NGQLLQTLTGHSSSVNGVAFRPDG-QTIASASDDKTVKLWNRNGQ-------- 294 (577)
T ss_dssp EECTTSSCEEEEETTSCEEEECT----TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC--------
T ss_pred EECCCCCEEEEEeCCCEEEEEeC----CCCEEEEEecCCCCEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCc--------
Confidence 99999999999999999999997 467888999999999999999987 69999999999999997543
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTII 531 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i 531 (812)
.+.....+...|.+++|+|++. .+++++.++ +.+|+ .... .......+...+.+++|+|+ +..+
T Consensus 295 ---------~~~~~~~h~~~v~~~~~~~~~~-~l~t~~~d~~i~~w~-~~~~--~~~~~~~~~~~v~~~~~s~~--g~~l 359 (577)
T 2ymu_A 295 ---------LLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWN-RNGQ--HLQTLTGHSSSVWGVAFSPD--GQTI 359 (577)
T ss_dssp ---------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEE-TTSC--EEEEECCCSSCEEEEEECTT--SSEE
T ss_pred ---------EEEEEecCCCCeEEEEECCCCC-EEEEEeCCCeEEEEe-CCCC--eeEEEeCCCCCEEEEEECCC--CCEE
Confidence 3333444556899999999985 455555555 56665 3332 23334456679999999999 4444
Q ss_pred EeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 532 STANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 532 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
+++..+. .+.+|+. .......+.+|...|.+++|+|++++|+++ +.|+
T Consensus 360 ~~~~~dg----~v~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~--~~d~ 407 (577)
T 2ymu_A 360 ASASDDK----TVKLWNR--------------------------NGQLLQTLTGHSSSVRGVAFSPDGQTIASA--SDDK 407 (577)
T ss_dssp EEEETTS----EEEEEET--------------------------TCCEEEEEECCSSCEEEEEECTTSSCEEEE--ETTS
T ss_pred EEEeCCC----EEEEEcC--------------------------CCCEEEEecCCCCCeEEEEECCCCCEEEEE--eCCC
Confidence 4443321 1222221 112345678899999999999999999998 8999
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC--
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-- 689 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~-- 689 (812)
.|++|+.... ++..+.+|...|++++|+| ++++|++++.|++|++|++...
T Consensus 408 ~v~~~~~~~~--------------------------~~~~~~~~~~~v~~~~~s~-d~~~l~~~~~d~~v~~w~~~~~~~ 460 (577)
T 2ymu_A 408 TVKLWNRNGQ--------------------------LLQTLTGHSSSVWGVAFSP-DDQTIASASDDKTVKLWNRNGQLL 460 (577)
T ss_dssp EEEEECTTCC--------------------------EEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTSCEE
T ss_pred EEEEEeCCCC--------------------------EEEEecCCCCCeEEEEECC-CCCEEEEEcCCCEEEEEECCCCEE
Confidence 9999996432 5778899999999999999 7889999999999999998652
Q ss_pred -------ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEE
Q psy4510 690 -------GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRI 762 (812)
Q Consensus 690 -------~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~i 762 (812)
..+..++|+|++++||+++.|++|++|+. +++ ++..+.+|...|++|+|||+|+ +||+++.||+|+|
T Consensus 461 ~~~~~~~~~v~~~~~spd~~~las~~~d~~i~iw~~-~~~----~~~~~~~h~~~v~~l~~s~dg~-~l~s~~~dg~v~l 534 (577)
T 2ymu_A 461 QTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKL 534 (577)
T ss_dssp EEEECCSSCEEEEEECTTSCEEEEEETTSEEEEEET-TSC----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcC-CCC----EEEEEeCCCCCEEEEEEcCCCC-EEEEEECcCEEEE
Confidence 23445678999999999999999999995 444 5678999999999999999999 8999999999999
Q ss_pred eeecCcceEEEE--eeeeeEEEeeecchhh
Q psy4510 763 GARRDMLYCFFV--SLVHCIFVWLKYQLFV 790 (812)
Q Consensus 763 Wd~~~~~~~~~~--~~~~~~~~w~~~~~~~ 790 (812)
||........+. ....+.+.|.+...+|
T Consensus 535 wd~~~~~~~~~~~h~~~v~~~~fs~dg~~l 564 (577)
T 2ymu_A 535 WNRNGQLLQTLTGHSSSVWGVAFSPDGQTI 564 (577)
T ss_dssp ECTTSCEEEEEECCSSCEEEEEECTTSSCE
T ss_pred EeCCCCEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 996433322222 2333667787766544
No 3
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=1.3e-57 Score=519.53 Aligned_cols=486 Identities=18% Similarity=0.346 Sum_probs=395.0
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
.+..+.||.+.|++++|+| ++++||+++.|++|+|||+.. + ....+.+|...|.+++|+|++++|++++.|+.+
T Consensus 49 ~~~~l~gh~~~V~~l~fsp-dg~~las~~~d~~i~vWd~~~-~----~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~~ 122 (577)
T 2ymu_A 49 LLQTLTGHSSSVWGVAFSP-DGQTIASASDDKTVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 122 (577)
T ss_dssp EEEEEECCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTS-C----EEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEEeCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCC-C----EEEEEECCCCCEEEEEECCCCCEEEEEcCCCce
Confidence 3455679999999999999 999999999999999999643 3 567789999999999999999999999999999
Q ss_pred EEeeCCCCCCC---------------------------------CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 248 AEHNKKRGKGP---------------------------------GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 248 ~vwd~~~~~~~---------------------------------~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
++|+....... ............|...|.++.|+|++ .+|++|+.|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d 201 (577)
T 2ymu_A 123 KLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDD 201 (577)
T ss_dssp EEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEECCSSCEEEEEECTTS-SCEEEEETT
T ss_pred eecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeeccCCCcceeeeeecCCC-CEEEEEcCC
Confidence 99996542100 00112233455678889999999998 789999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|++|+... . ....+.+|...|.+++|+|+++ +|++++.|+.|++||.. ...+..+ .+|...|++++|
T Consensus 202 ~~v~~w~~~~-~----~~~~~~~~~~~v~~~~~s~dg~-~l~~~~~d~~i~~w~~~----~~~~~~~-~~~~~~v~~v~~ 270 (577)
T 2ymu_A 202 KTVKLWNRNG-Q----LLQTLTGHSSSVRGVAFSPDGQ-TIASASDDKTVKLWNRN----GQLLQTL-TGHSSSVNGVAF 270 (577)
T ss_dssp SEEEEECTTS-C----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTT----SCEEEEE-CCCSSCEEEEEE
T ss_pred CEEEEEeCCC-c----EEEEEecCCCCEEEEEECCCCC-EEEEEeCCCEEEEEeCC----CCEEEEE-ecCCCCEEEEEE
Confidence 9999999643 3 4567788999999999999998 59999999999999964 3345555 789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+|++++|++++.|+.|++||. .++.+..+.+|...|.+++|+|++ .+|++++.|+.|++||+...
T Consensus 271 ~~d~~~l~~~~~d~~i~~w~~----~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~d~~i~~w~~~~~---------- 335 (577)
T 2ymu_A 271 RPDGQTIASASDDKTVKLWNR----NGQLLQTLTGHSSSVWGVAFSPDG-QTIASASDDKTVKLWNRNGQ---------- 335 (577)
T ss_dssp CTTSSEEEEEETTSCEEEEET----TSCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTSC----------
T ss_pred cCCCCEEEEEeCCCEEEEEeC----CCcEEEEEecCCCCeEEEEECCCC-CEEEEEeCCCeEEEEeCCCC----------
Confidence 999999999999999999997 457788899999999999999987 69999999999999998755
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
.+.....+...+.+++|+|++. .+++++.++ +.+|. .+.. .......+...|.+++|+|++. .+++
T Consensus 336 -------~~~~~~~~~~~v~~~~~s~~g~-~l~~~~~dg~v~~~~-~~~~--~~~~~~~~~~~v~~~~~s~dg~--~l~~ 402 (577)
T 2ymu_A 336 -------HLQTLTGHSSSVWGVAFSPDGQ-TIASASDDKTVKLWN-RNGQ--LLQTLTGHSSSVRGVAFSPDGQ--TIAS 402 (577)
T ss_dssp -------EEEEECCCSSCEEEEEECTTSS-EEEEEETTSEEEEEE-TTCC--EEEEEECCSSCEEEEEECTTSS--CEEE
T ss_pred -------eeEEEeCCCCCEEEEEECCCCC-EEEEEeCCCEEEEEc-CCCC--EEEEecCCCCCeEEEEECCCCC--EEEE
Confidence 3444445566899999999985 555555555 45554 4332 2233345667999999999954 3333
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
+..+ ..+.+|+. .......+.+|...|.+++|+|++++++++ +.|+.|
T Consensus 403 ~~~d----~~v~~~~~--------------------------~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~--~~d~~v 450 (577)
T 2ymu_A 403 ASDD----KTVKLWNR--------------------------NGQLLQTLTGHSSSVWGVAFSPDDQTIASA--SDDKTV 450 (577)
T ss_dssp EETT----SEEEEECT--------------------------TCCEEEEEECCSSCEEEEEECTTSSEEEEE--ETTSEE
T ss_pred EeCC----CEEEEEeC--------------------------CCCEEEEecCCCCCeEEEEECCCCCEEEEE--cCCCEE
Confidence 3222 12222321 112345678899999999999999999998 899999
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC----
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA---- 689 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~---- 689 (812)
++|++... ++..+.+|...|++++|+| ++++||+++.|++|++|+....
T Consensus 451 ~~w~~~~~--------------------------~~~~~~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~~~~~~~~~ 503 (577)
T 2ymu_A 451 KLWNRNGQ--------------------------LLQTLTGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNRNGQLLQT 503 (577)
T ss_dssp EEEETTSC--------------------------EEEEEECCSSCEEEEEECT-TSCEEEEEETTSEEEEEETTSCEEEE
T ss_pred EEEECCCC--------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEcCCCCEEEE
Confidence 99997543 5678899999999999999 8899999999999999997541
Q ss_pred -----ceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 690 -----GAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 690 -----~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
..+..++|+|+|++||+|+.||.|++||. +++ ++.++.+|.+.|++|+|+|||+ +|+|+|.|++|++||
T Consensus 504 ~~~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~----~~~~~~~h~~~v~~~~fs~dg~-~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 504 LTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQ----LLQTLTGHSSSVWGVAFSPDGQ-TIASASSDKTVKLWN 577 (577)
T ss_dssp EECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSC----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEEC
T ss_pred EeCCCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCC----EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCEEEEeC
Confidence 22445678999999999999999999996 444 5678999999999999999999 899999999999997
No 4
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=9.8e-54 Score=488.45 Aligned_cols=455 Identities=16% Similarity=0.231 Sum_probs=343.2
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP---- 244 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d---- 244 (812)
+..+.||.+.|++++||| +|++||+|+.||+|+|||+.++... ....+.+|..+|.+++|+|++++|++++.+
T Consensus 52 ~~~~~~h~~~v~~~~~sp-dg~~lasg~~d~~v~lWd~~~~~~~--~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~~~~ 128 (611)
T 1nr0_A 52 TEIYTEHSHQTTVAKTSP-SGYYCASGDVHGNVRIWDTTQTTHI--LKTTIPVFSGPVKDISWDSESKRIAAVGEGRERF 128 (611)
T ss_dssp CEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEESSSTTCC--EEEEEECSSSCEEEEEECTTSCEEEEEECCSSCS
T ss_pred CeEecCCCCceEEEEECC-CCcEEEEEeCCCCEEEeECCCCcce--eeEeecccCCceEEEEECCCCCEEEEEECCCCce
Confidence 445569999999999999 9999999999999999999765421 345678999999999999999999998865
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.|++|+. + .+...+.+|...|.+++|+|+++.+|++|+.|++|++||..... ....+.+|...|++
T Consensus 129 ~~v~~wd~--~-------~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~----~~~~l~~H~~~V~~ 195 (611)
T 1nr0_A 129 GHVFLFDT--G-------TSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFK----FKSTFGEHTKFVHS 195 (611)
T ss_dssp EEEEETTT--C-------CBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBE----EEEEECCCSSCEEE
T ss_pred eEEEEeeC--C-------CCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCe----EeeeeccccCceEE
Confidence 47888874 2 45567899999999999999985679999999999999987765 46678899999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
++|+|+++ +|++|+.|++|++||++++. ++..+.. +|...|.+++|+|++++|++|+.|++|++||++..
T Consensus 196 v~fspdg~-~las~s~D~~i~lwd~~~g~---~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~ 271 (611)
T 1nr0_A 196 VRYNPDGS-LFASTGGDGTIVLYNGVDGT---KTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL 271 (611)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEETTTCC---EEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred EEECCCCC-EEEEEECCCcEEEEECCCCc---EeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC
Confidence 99999998 69999999999999998543 3333322 79999999999999999999999999999999742
Q ss_pred CC----------------------------------------CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 399 KK----------------------------------------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 399 ~~----------------------------------------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+. +.....+.+|...|++++|+|++ .+|++++.|++|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg-~~l~s~s~D~~v~~ 350 (611)
T 1nr0_A 272 KVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADG-KTLFSADAEGHINS 350 (611)
T ss_dssp EEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred ceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCC-CEEEEEeCCCcEEE
Confidence 10 11234556899999999999987 69999999999999
Q ss_pred EEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe-EEEEeCCCCCcc-----------
Q psy4510 439 WDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIFRTISDLPSQ----------- 506 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~~~~~~----------- 506 (812)
||+.+.... ..+...+...|.+++|++++ .+++++.++. .+|.........
T Consensus 351 Wd~~~~~~~---------------~~~~~~h~~~v~~~~~s~~~--~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~ 413 (611)
T 1nr0_A 351 WDISTGISN---------------RVFPDVHATMITGIKTTSKG--DLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQ 413 (611)
T ss_dssp EETTTCCEE---------------ECSSCSCSSCEEEEEECTTS--CEEEEETTTEEEEECSSSSSSCTTSCCEEECSSC
T ss_pred EECCCCcee---------------eecccCCcceEEEEEECCCC--cEEEEEcCCceEEeecCCccccccceeeeecCCC
Confidence 999876321 01112234568888888763 4555555543 444322111000
Q ss_pred -----------c----------------EEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 507 -----------L----------------LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 507 -----------~----------------~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
. .....+...+.+++|+|+ +.++++++.+. .+.+|++....
T Consensus 414 ~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spd--g~~lasgs~D~----~v~lwd~~~~~------ 481 (611)
T 1nr0_A 414 PLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSND--KQFVAVGGQDS----KVHVYKLSGAS------ 481 (611)
T ss_dssp EEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTT--SCEEEEEETTS----EEEEEEEETTE------
T ss_pred CcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCC--CCEEEEeCCCC----eEEEEEccCCc------
Confidence 0 001112345677778887 44444443321 22222211100
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
.......+|...|++++|+|+|++|+++ +.|++|++|++.+...
T Consensus 482 ------------------~~~~~~~~h~~~v~~v~fspdg~~las~--s~d~~v~~w~~~~~~~---------------- 525 (611)
T 1nr0_A 482 ------------------VSEVKTIVHPAEITSVAFSNNGAFLVAT--DQSRKVIPYSVANNFE---------------- 525 (611)
T ss_dssp ------------------EEEEEEEECSSCEEEEEECTTSSEEEEE--ETTSCEEEEEGGGTTE----------------
T ss_pred ------------------eeeeeccCCCCceEEEEECCCCCEEEEE--cCCCCEEEEEcCCCCc----------------
Confidence 0011226799999999999999999998 8999999999987321
Q ss_pred CCCCCCCCCee--eecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc-------------eeEEEEecCCCCEE
Q psy4510 640 KGPGIPTPPLF--SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-------------AWSVYLYTNRFGVL 704 (812)
Q Consensus 640 ~~~~~~~~~~~--~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~-------------~~~~~~~s~dg~~l 704 (812)
++. .+.+|...|++++|+| ++++||||+.|++|+||++.++. .+..++|+|+++ |
T Consensus 526 --------~~~~~~~~~H~~~V~~v~fsp-dg~~lasgs~D~~v~lW~~~~~~~~~~~~~~~h~~~~v~~v~fs~d~~-l 595 (611)
T 1nr0_A 526 --------LAHTNSWTFHTAKVACVSWSP-DNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETT-I 595 (611)
T ss_dssp --------ESCCCCCCCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTE-E
T ss_pred --------eeeeeeeeecccceeEEEECC-CCCEEEEEECCCcEEEEECCCcccccchhhccCcccCeeEEEEcCCCE-E
Confidence 111 2345999999999999 88999999999999999997632 234557899998 9
Q ss_pred EeecCCCeEEEeecC
Q psy4510 705 ATGDCKRNIHIWTPR 719 (812)
Q Consensus 705 asgs~dg~i~iwd~~ 719 (812)
++|+.|++|++|++.
T Consensus 596 ~s~~~D~~i~lW~~~ 610 (611)
T 1nr0_A 596 VSAGQDSNIKFWNVP 610 (611)
T ss_dssp EEEETTSCEEEEECC
T ss_pred EEecCCCCEEEEecc
Confidence 999999999999973
No 5
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=6.7e-54 Score=533.22 Aligned_cols=522 Identities=16% Similarity=0.251 Sum_probs=414.7
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH 250 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw 250 (812)
.+.+|.+.|++++|+| ++++||+|+.||+|+|||+.++. ....+.+|...|.+++|+|++++|++++.|+.|++|
T Consensus 610 ~~~~h~~~v~~~~~s~-~~~~l~s~~~d~~i~vw~~~~~~----~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vw 684 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQ-DGQRIASCGADKTLQVFKAETGE----KLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIW 684 (1249)
T ss_dssp EECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEE
T ss_pred EEecccccEEEEEECC-CCCEEEEEeCCCeEEEEECCCCC----EEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEE
Confidence 4558999999999999 99999999999999999999887 667788999999999999999999999999999999
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|+.++ +++..+.+|...|.+++|+|++ ..++++|+.||.|++||+.++. ....+.+|.+.|++++|+|
T Consensus 685 d~~~~-------~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~----~~~~~~~h~~~v~~~~~sp 753 (1249)
T 3sfz_A 685 DSATG-------KLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKE----CRNTMFGHTNSVNHCRFSP 753 (1249)
T ss_dssp ETTTC-------CEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSS----EEEEECCCSSCEEEEEECS
T ss_pred ECCCC-------ceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcc----hhheecCCCCCEEEEEEec
Confidence 99985 7889999999999999999963 2579999999999999999887 5677889999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCccc---------------------------------------------------ce
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKS---------------------------------------------------CM 358 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~---------------------------------------------------~~ 358 (812)
+++ +|++++.||.|++||+++..... .+
T Consensus 754 ~~~-~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~ 832 (1249)
T 3sfz_A 754 DDE-LLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLL 832 (1249)
T ss_dssp STT-EEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEE
T ss_pred CCC-EEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCce
Confidence 998 69999999999999987532110 11
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
..+..+|...|.+++|+|+++++++|+.+|.|++||+. .+..+..+.+|...|++++|+|++ .+|++++.|+.|++
T Consensus 833 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg-~~l~s~s~dg~v~v 908 (1249)
T 3sfz_A 833 AEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNID---SRLKVADCRGHLSWVHGVMFSPDG-SSFLTASDDQTIRV 908 (1249)
T ss_dssp EEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEE
T ss_pred eEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcC---CCceeeecCCCccceEEEEECCCC-CEEEEEeCCCeEEE
Confidence 11223788899999999999999999999999999998 577888999999999999999987 68999999999999
Q ss_pred EEcCCCCchhHHHhhhh-----------------------hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 439 WDLAVERDSEIEQREAE-----------------------LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 439 wd~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
|++.............. ........ .......+.+++|+|++..+++++.++.+.
T Consensus 909 w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~ 986 (1249)
T 3sfz_A 909 WETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQI--DYLPEAQVSCCCLSPHLEYVAFGDEDGAIK 986 (1249)
T ss_dssp EEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCE--EEECCSCEEEEEECTTSSEEEEEETTSCCE
T ss_pred EEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceE--EEcccCcEEEEEEcCCCCEEEEEcCCCCEE
Confidence 99764211000000000 00000011 111234689999999987666666666677
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc-----------------------Cccc
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN-----------------------LTST 552 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~-----------------------l~~~ 552 (812)
+|....... ......+...|.+++|+|++..++.++.++...++ .+.. +..+
T Consensus 987 i~d~~~~~~--~~~~~~h~~~v~~l~~s~dg~~l~s~~~dg~i~vw---d~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~ 1061 (1249)
T 3sfz_A 987 IIELPNNRV--FSSGVGHKKAVRHIQFTADGKTLISSSEDSVIQVW---NWQTGDYVFLQAHQETVKDFRLLQDSRLLSW 1061 (1249)
T ss_dssp EEETTTTSC--EEECCCCSSCCCCEEECSSSSCEEEECSSSBEEEE---ETTTTEEECCBCCSSCEEEEEECSSSEEEEE
T ss_pred EEEcCCCce--eeecccCCCceEEEEECCCCCEEEEEcCCCEEEEE---ECCCCceEEEecCCCcEEEEEEcCCCcEEEE
Confidence 777655432 22334566799999999995433333322222222 1111 1112
Q ss_pred ccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccc
Q psy4510 553 EEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
..++.+.+|+.. .......+.+|.+.|.+++|+|++++++++ +.||.|++|++.++.
T Consensus 1062 ~~dg~v~vwd~~-----------~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~--s~d~~v~iwd~~~~~---------- 1118 (1249)
T 3sfz_A 1062 SFDGTVKVWNVI-----------TGRIERDFTCHQGTVLSCAISSDATKFSST--SADKTAKIWSFDLLS---------- 1118 (1249)
T ss_dssp ESSSEEEEEETT-----------TTCCCEEEECCSSCCCCEEECSSSSSCEEE--CCSSCCCEECSSSSS----------
T ss_pred ECCCcEEEEECC-----------CCceeEEEcccCCcEEEEEECCCCCEEEEE--cCCCcEEEEECCCcc----------
Confidence 223334444332 234556788899999999999999999998 899999999998876
Q ss_pred ccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce-------------------eE
Q psy4510 633 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------------------WS 693 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~-------------------~~ 693 (812)
++..+.+|.+.|++++|+| ++.+|++++.||+|++||+.+++. +.
T Consensus 1119 ---------------~~~~l~~h~~~v~~~~~s~-dg~~lat~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~ 1182 (1249)
T 3sfz_A 1119 ---------------PLHELKGHNGCVRCSAFSL-DGILLATGDDNGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVT 1182 (1249)
T ss_dssp ---------------CSBCCCCCSSCEEEEEECS-SSSEEEEEETTSCCCEEESSSSCCCCCCCCCC-------CCSCCC
T ss_pred ---------------eeeeeccCCCcEEEEEECC-CCCEEEEEeCCCEEEEEECCCCceEEEeccccccccccccCceEE
Confidence 6677889999999999999 889999999999999999987543 33
Q ss_pred EEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 694 VYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 694 ~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.++|+|||++|++++ |.|++||+.+++ .+..+.+|...|++++|+|||+ +|++++.||.|++|++-
T Consensus 1183 ~l~fs~dg~~l~s~~--g~v~vwd~~~g~----~~~~~~~~~~~i~~~~~s~dg~-~l~~~~~dg~v~vw~l~ 1248 (1249)
T 3sfz_A 1183 DVCFSPDSKTLVSAG--GYLKWWNVATGD----SSQTFYTNGTNLKKIHVSPDFR-TYVTVDNLGILYILQVL 1248 (1249)
T ss_dssp EEEECTTSSCEEEES--SSEEEBCSSSCB----CCCCCCCSSCCCCCCEECSSSC-CEEEECTTCCEEEECCC
T ss_pred EEEECCCCCEEEECC--CeEEEEECCCCc----eeeeeeccCCcccEEEECCCCC-EEEEecCCcEEEEEeec
Confidence 467899999999986 899999999987 4678899999999999999999 89999999999999974
No 6
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=5.2e-52 Score=477.30 Aligned_cols=515 Identities=14% Similarity=0.118 Sum_probs=386.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC-eeeeeEcC--CCCcEEEeeCCCceEEe
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS-AEDLQWSD--LKTALQTVDDPFQLAEH 250 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-V~~l~~s~--~~~~l~s~~~d~~i~vw 250 (812)
.|.+.|.+++|+| ++++||+++ ++.|+||++.++.........+.+|... |++++|+| ++++|++++.|+.|++|
T Consensus 16 ~~~~~v~~~~~sp-dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw 93 (615)
T 1pgu_A 16 TQRNFTTHLSYDP-TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVW 93 (615)
T ss_dssp CCTTCCCCCEEET-TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEE
T ss_pred CccCceeEEEECC-CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEE
Confidence 6889999999999 999999998 7899999999772222267788999999 99999999 99999999999999999
Q ss_pred eCCCCCC-CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 251 NKKRGKG-PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 251 d~~~~~~-~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
++.++.. .......+..+.+|...|.+++|+|++ .+|++++.+ +.|++|| .+. ....+.+|...|.++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~~~~~~~v~~~d--~~~----~~~~~~~~~~~v~~~ 166 (615)
T 1pgu_A 94 GWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEG-RRLCVVGEGRDNFGVFISWD--SGN----SLGEVSGHSQRINAC 166 (615)
T ss_dssp EEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTS-SEEEEEECCSSCSEEEEETT--TCC----EEEECCSCSSCEEEE
T ss_pred eCCCCcccccccccccchhhcccccEEEEEEeCCC-CEEEEeccCCCCccEEEEEE--CCC----cceeeecCCccEEEE
Confidence 9964200 000025667888999999999999999 788888887 6888888 333 456778999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC---CeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS---DVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~---~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
+|+|+++.+|++++.||.|++||++. ...+..+ ..|.. .|.+++|+|+ +++|++|+.||.|++||++ .+
T Consensus 167 ~~~~~~~~~l~~~~~d~~v~vwd~~~---~~~~~~~-~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~ 239 (615)
T 1pgu_A 167 HLKQSRPMRSMTVGDDGSVVFYQGPP---FKFSASD-RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGK---SG 239 (615)
T ss_dssp EECSSSSCEEEEEETTTEEEEEETTT---BEEEEEE-CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETT---TC
T ss_pred EECCCCCcEEEEEeCCCcEEEEeCCC---cceeeee-cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECC---CC
Confidence 99999987799999999999999884 4455555 67888 9999999999 9999999999999999998 56
Q ss_pred CceEEc-c---cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCC-----Cc
Q psy4510 402 SSVATF-K---HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQ-----KE 472 (812)
Q Consensus 402 ~~~~~~-~---~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 472 (812)
+.+..+ . .|...|.+++|+ ++ .+|++++.|+.|++||+...+ ........ ..
T Consensus 240 ~~~~~~~~~~~~~~~~v~~~~~~-~~-~~l~~~~~d~~i~~wd~~~~~-----------------~~~~~~~~~~~~~~~ 300 (615)
T 1pgu_A 240 EFLKYIEDDQEPVQGGIFALSWL-DS-QKFATVGADATIRVWDVTTSK-----------------CVQKWTLDKQQLGNQ 300 (615)
T ss_dssp CEEEECCBTTBCCCSCEEEEEES-SS-SEEEEEETTSEEEEEETTTTE-----------------EEEEEECCTTCGGGC
T ss_pred CEeEEecccccccCCceEEEEEc-CC-CEEEEEcCCCcEEEEECCCCc-----------------EEEEEcCCCCcccCc
Confidence 778888 6 899999999999 65 799999999999999998763 22222222 46
Q ss_pred eeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc-eEE----------
Q psy4510 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF-NIF---------- 541 (812)
Q Consensus 473 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~-~~~---------- 541 (812)
+..+.|. ++..+++++.++.+.+|+.... ........+...|.+++| |+ +++++.++. .++
T Consensus 301 ~~~~~~~-~~~~l~~~~~~g~i~~~d~~~~--~~~~~~~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~~~~~~~~ 372 (615)
T 1pgu_A 301 QVGVVAT-GNGRIISLSLDGTLNFYELGHD--EVLKTISGHNKGITALTV-NP----LISGSYDGRIMEWSSSSMHQDHS 372 (615)
T ss_dssp EEEEEEE-ETTEEEEEETTSCEEEEETTEE--EEEEEECCCSSCEEEEET-TT----TEEEETTSCEEETTTTEEECCCC
T ss_pred eeEEEeC-CCCeEEEEECCCCEEEEECCCC--cEEEEEeCCCCCEEEEEe-cC----cEEECCCCeEEEEEchhhcCccc
Confidence 7788886 4444444444445566654332 122233345567777777 65 222222211 110
Q ss_pred ---EEee---cccCcccccccccccccccCCCC--------------------CCcc---ccCCCccceEEecccceEEE
Q psy4510 542 ---RTIS---MSNLTSTEEDNERELEDDESEGS--------------------GDED---RRKDPVMNSYFIRHRGCINR 592 (812)
Q Consensus 542 ---~~~~---~~~l~~~~~~~~~~~~~~~~~~~--------------------~~~~---~~~~~~~~~~~~~h~~~v~~ 592 (812)
..+. ...+..+..++.+.+|+...... .... ........ ....|...+.+
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 451 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDII-KSVRLNSPGSA 451 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEE-EEEECSSCEEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCcee-eecccCCCceE
Confidence 0000 01122222333334443221100 0000 00011111 22247788999
Q ss_pred EEEeccCCeEEEEeecC-cceEEEEeccccccccCCcccccccccccCCCCCCCCCCe-eeecCCCCceEEEEeCCCCCC
Q psy4510 593 VRTCQYGSTTLAGVWGE-VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPG 670 (812)
Q Consensus 593 l~~s~~g~~l~~~~~~~-dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~gh~~~V~~l~~sp~~~~ 670 (812)
++|+ +++++++ +. ||.|++|++.++. .. ..+.+|...|++++|+| +++
T Consensus 452 ~~~~--~~~l~~~--~~~d~~i~~~~~~~~~-------------------------~~~~~~~~~~~~v~~~~~s~-~g~ 501 (615)
T 1pgu_A 452 VSLS--QNYVAVG--LEEGNTIQVFKLSDLE-------------------------VSFDLKTPLRAKPSYISISP-SET 501 (615)
T ss_dssp EEEC--SSEEEEE--ETTTSCEEEEETTEEE-------------------------EEEECSSCCSSCEEEEEECT-TSS
T ss_pred EEEc--CCEEEEe--ecCCCeEEEEECCCcc-------------------------ccccccCCccCceEEEEECC-CCC
Confidence 9999 8888888 77 9999999998875 22 56788999999999999 889
Q ss_pred eEEecCCCceEEEEecCCCc-----------eeEEEEecC----------CCCEEEeecCCCeEEEeecCCCCCcccccc
Q psy4510 671 VLATGDCKRNIHIWTPREAG-----------AWSVYLYTN----------RFGVLATGDCKRNIHIWTPREAGAWQVDQK 729 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~-----------~~~~~~~s~----------dg~~lasgs~dg~i~iwd~~~~~~~~~~~~ 729 (812)
+|++++.||.|++|++.+++ .+..++|+| ++++||+|+.||.|++|++.++.. ++.
T Consensus 502 ~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~---~~~ 578 (615)
T 1pgu_A 502 YIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMK---IIK 578 (615)
T ss_dssp EEEEEETTSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTC---CEE
T ss_pred EEEEcCCCCeEEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCce---ech
Confidence 99999999999999998733 345667899 999999999999999999998743 577
Q ss_pred cccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 730 PLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 730 ~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
.+.+|.+.|++|+|+|+++ |++++.||+|++|++..
T Consensus 579 ~~~~h~~~v~~l~~s~~~~--l~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 579 ALNAHKDGVNNLLWETPST--LVSSGADACIKRWNVVL 614 (615)
T ss_dssp ETTSSTTCEEEEEEEETTE--EEEEETTSCEEEEEEC-
T ss_pred hhhcCccceEEEEEcCCCC--eEEecCCceEEEEeeec
Confidence 8999999999999999997 99999999999999874
No 7
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7.4e-53 Score=497.94 Aligned_cols=515 Identities=10% Similarity=0.059 Sum_probs=363.6
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....++ ||.+.|++++|+| ++++||+|+.||+|+||+..+.+ .. ....|..+|.+++|+| +++|++++.|+.
T Consensus 9 ~~~~~~-gh~~~V~~lafsp-dg~~lAsgs~Dg~I~lw~~~~~~----~~-~~~~~~~~V~~l~fsp-g~~L~S~s~D~~ 80 (902)
T 2oaj_A 9 AETNKY-GMSSKPIAAAFDF-TQNLLAIATVTGEVHIYGQQQVE----VV-IKLEDRSAIKEMRFVK-GIYLVVINAKDT 80 (902)
T ss_dssp EEEEEE-ECSSCEEEEEEET-TTTEEEEEETTSEEEEECSTTCE----EE-EECSSCCCEEEEEEET-TTEEEEEETTCE
T ss_pred cccccc-CCCCCcEEEEECC-CCCEEEEEeCCCEEEEEeCCCcE----EE-EEcCCCCCEEEEEEcC-CCEEEEEECcCe
Confidence 345556 9999999999999 99999999999999999987653 22 2235788999999999 889999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-------ccccCCC
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-------KPLVGHT 319 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-------~~~~~h~ 319 (812)
|++||+.++ +++.++. |.+.|.+++|+|++ .+|++|+.||+|++||+.++....... ..+.+|.
T Consensus 81 v~lWd~~~~-------~~~~~~~-~~~~V~~v~~sp~g-~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~ 151 (902)
T 2oaj_A 81 VYVLSLYSQ-------KVLTTVF-VPGKITSIDTDASL-DWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARL 151 (902)
T ss_dssp EEEEETTTC-------SEEEEEE-CSSCEEEEECCTTC-SEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCC
T ss_pred EEEEECCCC-------cEEEEEc-CCCCEEEEEECCCC-CEEEEEcCCCcEEEEECCCCccccceeccccccccccccCC
Confidence 999999885 6666775 67899999999999 899999999999999998765210000 3457899
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-----------------CcCCCCeEEEEEcCCCCEEE
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-----------------NAHTSDVNVISWNRTEPLIV 382 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~~v~~l~~~~~~~~l~ 382 (812)
+.|++++|+|++..+|++|+.||.| +||++.. .++..+. ..|...|++++|+|+|++|+
T Consensus 152 ~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 152 SPIVSIQWNPRDIGTVLISYEYVTL-TYSLVEN---EIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp CCCCEEEEETTEEEEEEEECSSCEE-EEETTTT---EEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred CCeEEEEEccCCCCEEEEEeCCCcE-EEECCCC---ceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 9999999999865579999999999 9999853 3333331 23457899999999999999
Q ss_pred EEeCCCcEEEEecCCCCCCCceEE--c---cc-------------CCCCEEEEEEcc----CCCcEEEEEECC-----CC
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVAT--F---KH-------------HTAPVTTVEWHP----TESSTFASGGAD-----DQ 435 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~--~---~~-------------h~~~v~~v~~~p----~~~~~l~s~~~d-----g~ 435 (812)
+|+.||.|++||+++ ++++.. + .. |..+|++++|++ ++..+|++|+.+ ..
T Consensus 228 sgs~Dg~i~lWd~~~---g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~ 304 (902)
T 2oaj_A 228 TIHEDNSLVFWDANS---GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRGDNQS 304 (902)
T ss_dssp EEETTCCEEEEETTT---CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTSSCCC
T ss_pred EEECCCeEEEEECCC---CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCCCCce
Confidence 999999999999984 455442 2 11 355799999964 434678888776 37
Q ss_pred EEEEEcCCCCchhH---HHhhhhhccCCCceEEeecCCCceeEEEEcCC---------CCCEEEEEeC-CCeEEEEeCCC
Q psy4510 436 IALWDLAVERDSEI---EQREAELKDLPSQLLFIHLGQKEIKELHWHPQ---------LPGTIISTAN-SGFNIFRTISD 502 (812)
Q Consensus 436 v~iwd~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~---------~~~~~~~~~~-~~~~~~~~~~~ 502 (812)
+.+|++........ ...................+...|.++.+.++ .+..+++.+. +.+.+|.....
T Consensus 305 v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g 384 (902)
T 2oaj_A 305 LTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETMLYPSG 384 (902)
T ss_dssp EEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEETTTC
T ss_pred EEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEECCCC
Confidence 99998632100000 00000000000011111123457888888662 2334455555 44667664322
Q ss_pred CCccc-----EEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 503 LPSQL-----LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 503 ~~~~~-----~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
..... .....+...|+++++++.. ...|...... . .
T Consensus 385 ~~~~~~~~~~~~l~~~~~~v~~~~~s~~~-----------------~~~w~~~~~~--------------~--------~ 425 (902)
T 2oaj_A 385 IFTDKASLFPQNLSWLRPLATTSMAASVP-----------------NKLWLGALSA--------------A--------Q 425 (902)
T ss_dssp CEECCGGGSCGGGTTBTTBEEEEEEEEEE-----------------HHHHHHHHHT--------------T--------B
T ss_pred CcccccccCCCcccccCCCeeEEEEEEcC-----------------HHHHHHHHhc--------------c--------c
Confidence 11100 0011223456666654421 0111100000 0 0
Q ss_pred ccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee-ee----
Q psy4510 578 VMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF-SF---- 652 (812)
Q Consensus 578 ~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~---- 652 (812)
.....+.+|...+.+++|+|+++.|++| +.|++|++||+.++... .+ ..+. .+
T Consensus 426 ~~~~~l~G~~~~v~sv~~spdg~~laSg--s~DgtVrlWd~~~g~~~--~~------------------~~~~~~l~~~~ 483 (902)
T 2oaj_A 426 NKDYLLKGGVRTKRQKLPAEYGTAFITG--HSNGSVRIYDASHGDIQ--DN------------------ASFEVNLSRTL 483 (902)
T ss_dssp CCCCSCCCSBCCCCCCCCCSEEEEEEEE--ETTSEEEEEESSCCTTT--TT------------------BCEEEEHHHHT
T ss_pred CCCCcccCCcCCCCcccccccCcEEEEe--cCCCcEEEEECCCcccc--CC------------------ceEEeechhhc
Confidence 0112456788888899999999999999 89999999999887411 00 0010 11
Q ss_pred -cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc-----------------------------------------
Q psy4510 653 -SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG----------------------------------------- 690 (812)
Q Consensus 653 -~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~----------------------------------------- 690 (812)
.+|...|++|+|+| ++++||+|+.||+|+||++.+++
T Consensus 484 ~~~h~~~V~svafsp-dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 562 (902)
T 2oaj_A 484 NKAKELAVDKISFAA-ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVR 562 (902)
T ss_dssp TCSSSCCEEEEEEET-TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCS
T ss_pred CCCCCCceeEEEecC-CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCC
Confidence 28999999999999 89999999999999999987542
Q ss_pred --------------eeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccc-cccccc-CCCcceeEeEEe-----cCC--
Q psy4510 691 --------------AWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQV-DQKPLV-GHTNSVEDLQWS-----PGE-- 747 (812)
Q Consensus 691 --------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~-~~~~~~-gH~~~V~~l~fs-----~dg-- 747 (812)
.+..++||||| +||+|+.|++|+|||+++...... ..+.+. +|.+.|++|+|| |||
T Consensus 563 ~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 563 QGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSE
T ss_pred CccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCc
Confidence 12345699999 999999999999999876542100 113565 999999999999 886
Q ss_pred -ceeEEeeccCCceEEeee---cCcc
Q psy4510 748 -KRVLASCSVDRSNRIGAR---RDML 769 (812)
Q Consensus 748 -~~~L~s~s~Dg~i~iWd~---~~~~ 769 (812)
+ +|++++.|++|++||+ .+++
T Consensus 642 ~~-~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 642 SI-LMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp EE-EEEEEETTSEEEEEEEEECGGGC
T ss_pred ce-EEEEEecCCcEEEEEEecCCCCc
Confidence 6 8999999999999999 5555
No 8
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=9e-49 Score=465.78 Aligned_cols=480 Identities=15% Similarity=0.200 Sum_probs=382.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
......+.+|.+.|.+++|+| ++++||+|+.||.|+|||+.++. ....+.+|..+|++++|+|++++|++++.++
T Consensus 3 l~~~~~~~~h~~~v~~i~~sp-~~~~la~~~~~g~v~iwd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVEIWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cccceeeecCCCceEEEEECC-CCCEEEEEeCCCEEEEEECCCCc----eEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 344556679999999999999 99999999999999999998876 5677889999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++|++.++ +.+..+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++.. ....+.+|...|.++
T Consensus 78 ~i~vw~~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~vw~~~~~~~---~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 78 RIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCV 146 (814)
T ss_dssp EEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSEEEEEEGGGTSE---EEEEEECCSSCEEEE
T ss_pred eEEEEECCCC-------cEEEEEecCCCCEEEEEEeCCC-CEEEEEcCCCEEEEEECCCCce---EEEEEcCCCCcEEEE
Confidence 9999999885 7788899999999999999999 7999999999999999987632 456678899999999
Q ss_pred EEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 326 QWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 326 ~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+|+| ++. +|++++.||.|++||++.. .....+...+...+.+++|+| ++++|++|+.||.|++||++ .+.
T Consensus 147 ~~~p~~~~-~l~~~~~dg~v~vwd~~~~---~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~---~~~ 219 (814)
T 3mkq_A 147 AFNPKDPS-TFASGCLDRTVKVWSLGQS---TPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKS 219 (814)
T ss_dssp EEETTEEE-EEEEEETTSEEEEEETTCS---SCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT---TTE
T ss_pred EEEcCCCC-EEEEEeCCCeEEEEECCCC---cceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC---CCc
Confidence 9999 555 7999999999999999853 334444355668999999999 88999999999999999998 467
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
.+..+.+|...|++++|+|++ .+|++++.||.|++||+.+.+ .......+...+.+++|+|++
T Consensus 220 ~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~dg~v~vwd~~~~~----------------~~~~~~~~~~~v~~~~~~~~~ 282 (814)
T 3mkq_A 220 CVATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK----------------VEKTLNVGLERSWCIATHPTG 282 (814)
T ss_dssp EEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCS----------------EEEEECCSSSSEEEEEECTTC
T ss_pred EEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCeEEEEECCCCc----------------EEEEeecCCCcEEEEEEccCC
Confidence 788899999999999999997 599999999999999998763 233334445689999999998
Q ss_pred CCE-EEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCce--EEEEeec---ccCccccccc
Q psy4510 483 PGT-IISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN--IFRTISM---SNLTSTEEDN 556 (812)
Q Consensus 483 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~--~~~~~~~---~~l~~~~~~~ 556 (812)
..+ ++++..+++.+|+.... ...+.++|+ +.+++.+..... .+..... +.+....
T Consensus 283 ~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 343 (814)
T 3mkq_A 283 RKNYIASGFDNGFTVLSLGND--------------EPTLSLDPV--GKLVWSGGKNAAASDIFTAVIRGNEEVEQDE--- 343 (814)
T ss_dssp GGGEEEEEETTEEEEEECSCC--------------SCCEEECSS--SEEEEECCTTSCTTCEEEEECCSCCCCCSSS---
T ss_pred CceEEEEEeCCCEEEEEcCCC--------------CceeEECCC--CCEEEECcccccceeeeeeecccccccccCc---
Confidence 664 67777777777764332 234567777 556655433211 1111111 1100000
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCccccccccc
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNK 636 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~ 636 (812)
...........+...+.+++|+|+|++++++ + +|.+.+|++....
T Consensus 344 ------------------~~~~~~~~~~~~~~~~~~~~~spdg~~la~~--~-~~~~~i~~~~~~~-------------- 388 (814)
T 3mkq_A 344 ------------------PLSLQTKELGSVDVFPQSLAHSPNGRFVTVV--G-DGEYVIYTALAWR-------------- 388 (814)
T ss_dssp ------------------CBCCCCEEECCCSSCCSEEEECTTSSEEEEE--E-TTEEEEEETTTTE--------------
T ss_pred ------------------cceeeeecCCCCccCCceeEECCCCCEEEEe--c-CCEEEEEECcccc--------------
Confidence 0111233455667788999999999999987 5 8999999976442
Q ss_pred ccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc--eeEEEEecCCC---CEEEeecCCC
Q psy4510 637 KRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--AWSVYLYTNRF---GVLATGDCKR 711 (812)
Q Consensus 637 ~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~--~~~~~~~s~dg---~~lasgs~dg 711 (812)
..+.+.+.+++|+| ++++||+++.+|.|++|+...+. .+....++|+| ++|++++.++
T Consensus 389 ----------------~~~~~~i~~~~~sp-dg~~la~~~~~g~v~l~~~~~~~~~~v~~~~~s~dg~~~~~l~~~~~d~ 451 (814)
T 3mkq_A 389 ----------------NKAFGKCQDFVWGP-DSNSYALIDETGQIKYYKNFKEVTSWSVPMHSAIDRLFSGALLGVKSDG 451 (814)
T ss_dssp ----------------EEEEEECSEEEECT-TSSCEEEECTTCCEEEEETTEECTTCCCCCSSCCCEEECSSSEEEEETT
T ss_pred ----------------ccCCCceEEEEEeC-CCCeEEEEeCCCcEEEEECCCCccceEEcCCcCccceecceEEEEecCC
Confidence 12345788999999 88899999999999999875543 33445689998 6899999999
Q ss_pred eEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEee------ccCCceEEee
Q psy4510 712 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC------SVDRSNRIGA 764 (812)
Q Consensus 712 ~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~------s~Dg~i~iWd 764 (812)
.|++||+.+++ ++..+.+|.. .++|||||+ +|+++ +.++.+.+|-
T Consensus 452 ~v~~~d~~~~~----~~~~~~~~~~---~v~~s~dg~-~la~~~~~~~~~~~~~~~~~~ 502 (814)
T 3mkq_A 452 FVYFFDWDNGT----LVRRIDVNAK---DVIWSDNGE-LVMIVNTNSNGDEASGYTLLF 502 (814)
T ss_dssp EEEEECTTTCC----EEEEESSCEE---EEEECTTSS-EEEEEECCCSSCSCSEEEEEE
T ss_pred EEEEEECCcCc----EEEEEecCCC---EEEEcCCCC-EEEEEEcCcccCCceEEEEEe
Confidence 99999999887 4667777765 899999999 79999 6666666664
No 9
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=100.00 E-value=3e-48 Score=482.43 Aligned_cols=477 Identities=15% Similarity=0.214 Sum_probs=374.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|.+.|++++|+|++++|++|+.|+.|++|++.++ .++.++.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 607 ~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~~~d 678 (1249)
T 3sfz_A 607 SRLVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETG-------EKLLDIKAHEDEVLCCAFSSDD-SYIATCSAD 678 (1249)
T ss_dssp CSEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETT
T ss_pred ceEEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CEEEEeccCCCCEEEEEEecCC-CEEEEEeCC
Confidence 44567899999999999999999999999999999999885 7888999999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
|+|++||+.++. ....+.+|...|.+++|+|++ ..++++|+.||.|++||+++ ..++..+ .+|...|++++
T Consensus 679 ~~v~vwd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~ 750 (1249)
T 3sfz_A 679 KKVKIWDSATGK----LVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ---KECRNTM-FGHTNSVNHCR 750 (1249)
T ss_dssp SEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS---SSEEEEE-CCCSSCEEEEE
T ss_pred CeEEEEECCCCc----eEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC---cchhhee-cCCCCCEEEEE
Confidence 999999999887 567788999999999999953 33799999999999999984 4455666 78999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCC---------------------------------------------------CC
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKK---------------------------------------------------GS 402 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~---------------------------------------------------~~ 402 (812)
|+|++++|++|+.||.|++||++.... +.
T Consensus 751 ~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~ 830 (1249)
T 3sfz_A 751 FSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSG 830 (1249)
T ss_dssp ECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCC
T ss_pred EecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCC
Confidence 999999999999999999999874210 00
Q ss_pred ceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 403 SVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 403 ~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.+..+ .+|...|.+++|+|++ .++++++.|+.|++||+.... .......+...|.+++|+|+
T Consensus 831 ~~~~~~~~~~~~v~~~~~sp~~-~~l~~~~~dg~v~vwd~~~~~----------------~~~~~~~h~~~v~~v~~spd 893 (1249)
T 3sfz_A 831 LLAEIHTGHHSTIQYCDFSPYD-HLAVIALSQYCVELWNIDSRL----------------KVADCRGHLSWVHGVMFSPD 893 (1249)
T ss_dssp EEEEEECSSSSCCCEEEECSST-TEEEEECSSSCEEEEETTTTE----------------EEEEECCCSSCEEEEEECTT
T ss_pred ceeEEcCCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEEcCCCc----------------eeeecCCCccceEEEEECCC
Confidence 11111 2678899999999987 699999999999999998763 23333445568999999999
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCC-----------------------------cccE------EeecCCCCeeEEEEcCCC
Q psy4510 482 LPGTIISTANSGFNIFRTISDLP-----------------------------SQLL------FIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~------~~~~~~~~i~~~~~~p~~ 526 (812)
+..++.++.++.+.+|....... .... ........+.+++++|++
T Consensus 894 g~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g 973 (1249)
T 3sfz_A 894 GSSFLTASDDQTIRVWETKKVCKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHL 973 (1249)
T ss_dssp SSEEEEEETTSCEEEEEHHHHHSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTS
T ss_pred CCEEEEEeCCCeEEEEEccccceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCC
Confidence 86555444455567775321100 0000 011123578899999995
Q ss_pred CCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEe
Q psy4510 527 PGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 527 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
...+++..++... ++++.. ......+.+|...|.+++|+|+|++++++
T Consensus 974 ~~l~~g~~~g~i~------i~d~~~-------------------------~~~~~~~~~h~~~v~~l~~s~dg~~l~s~- 1021 (1249)
T 3sfz_A 974 EYVAFGDEDGAIK------IIELPN-------------------------NRVFSSGVGHKKAVRHIQFTADGKTLISS- 1021 (1249)
T ss_dssp SEEEEEETTSCCE------EEETTT-------------------------TSCEEECCCCSSCCCCEEECSSSSCEEEE-
T ss_pred CEEEEEcCCCCEE------EEEcCC-------------------------CceeeecccCCCceEEEEECCCCCEEEEE-
Confidence 4333333222221 122111 12244567899999999999999999998
Q ss_pred ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 607 WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 607 ~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
+.||.|++|++.++. ...+.+|...|.+++|+| ++ .+++++.|++|++||+
T Consensus 1022 -~~dg~i~vwd~~~~~--------------------------~~~~~~~~~~v~~~~~~~-~~-~l~~~~~dg~v~vwd~ 1072 (1249)
T 3sfz_A 1022 -SEDSVIQVWNWQTGD--------------------------YVFLQAHQETVKDFRLLQ-DS-RLLSWSFDGTVKVWNV 1072 (1249)
T ss_dssp -CSSSBEEEEETTTTE--------------------------EECCBCCSSCEEEEEECS-SS-EEEEEESSSEEEEEET
T ss_pred -cCCCEEEEEECCCCc--------------------------eEEEecCCCcEEEEEEcC-CC-cEEEEECCCcEEEEEC
Confidence 899999999999875 223568999999999999 55 7889999999999999
Q ss_pred CCCcee----------EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeecc
Q psy4510 687 REAGAW----------SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756 (812)
Q Consensus 687 ~~~~~~----------~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~ 756 (812)
.+++.. ..++++|++++|++|+.||+|++|++.+++ ....+.+|.+.|++++|||+|+ +||+++.
T Consensus 1073 ~~~~~~~~~~~~~~~v~~~~~s~d~~~l~s~s~d~~v~iwd~~~~~----~~~~l~~h~~~v~~~~~s~dg~-~lat~~~ 1147 (1249)
T 3sfz_A 1073 ITGRIERDFTCHQGTVLSCAISSDATKFSSTSADKTAKIWSFDLLS----PLHELKGHNGCVRCSAFSLDGI-LLATGDD 1147 (1249)
T ss_dssp TTTCCCEEEECCSSCCCCEEECSSSSSCEEECCSSCCCEECSSSSS----CSBCCCCCSSCEEEEEECSSSS-EEEEEET
T ss_pred CCCceeEEEcccCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCcc----eeeeeccCCCcEEEEEECCCCC-EEEEEeC
Confidence 886543 334689999999999999999999999887 4678999999999999999999 8999999
Q ss_pred CCceEEeeecCcceE-EE-----------EeeeeeEEEeeecchhh
Q psy4510 757 DRSNRIGARRDMLYC-FF-----------VSLVHCIFVWLKYQLFV 790 (812)
Q Consensus 757 Dg~i~iWd~~~~~~~-~~-----------~~~~~~~~~w~~~~~~~ 790 (812)
||+|++||+.++... .+ .....+.+.|++...+|
T Consensus 1148 dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs~dg~~l 1193 (1249)
T 3sfz_A 1148 NGEIRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFSPDSKTL 1193 (1249)
T ss_dssp TSCCCEEESSSSCCCCCCCCCC-------CCSCCCEEEECTTSSCE
T ss_pred CCEEEEEECCCCceEEEeccccccccccccCceEEEEEECCCCCEE
Confidence 999999999887621 11 12223667777766554
No 10
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=100.00 E-value=4.7e-46 Score=427.67 Aligned_cols=457 Identities=17% Similarity=0.190 Sum_probs=353.5
Q ss_pred CccCcCCCCCc-eEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCc----ccccccccCCCCCCeeeeeEcCCCCcEEEe
Q psy4510 168 PLFSFSGHLTE-GFAMDWSST-EPGVLATGDCKRNIHIWTPREAGA----WQVDQKPLGGHTNSAEDLQWSDLKTALQTV 241 (812)
Q Consensus 168 ~i~~~~gh~~~-i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~----~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~ 241 (812)
.+..+.+|.+. |++++|+|. ++++||+|+.||.|+|||+.++.. .......+..|..+|.+++|+|++++|+++
T Consensus 55 ~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~ 134 (615)
T 1pgu_A 55 PVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVV 134 (615)
T ss_dssp SEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred cceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEe
Confidence 44556689999 999999995 789999999999999999975410 112556778899999999999999999999
Q ss_pred eCC----CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 242 DDP----FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 242 ~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
+.+ +.|++|+ .+ +++..+.+|...|.+++|+|+++.+|++|+.|+.|++||+.+.. ....+.+
T Consensus 135 ~~~~~~~~~v~~~d--~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~----~~~~~~~ 201 (615)
T 1pgu_A 135 GEGRDNFGVFISWD--SG-------NSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK----FSASDRT 201 (615)
T ss_dssp ECCSSCSEEEEETT--TC-------CEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE----EEEEECS
T ss_pred ccCCCCccEEEEEE--CC-------CcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcc----eeeeecc
Confidence 987 6899998 32 67788999999999999999985589999999999999998776 5667788
Q ss_pred CCC---CEEEEEEcCC-CCeEEEEEECCCeEEEEECCCCCcccceeecCC---cCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 318 HTN---SVEDLQWSPG-EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN---AHTSDVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 318 h~~---~v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---~~~~~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
|.. .|.+++|+|+ ++ +|++++.||.|++||+++ ...+..+.. .|...|.+++|+ ++++|++++.||.|
T Consensus 202 ~~~~~~~v~~~~~~~~~~~-~l~~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i 276 (615)
T 1pgu_A 202 HHKQGSFVRDVEFSPDSGE-FVITVGSDRKISCFDGKS---GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATI 276 (615)
T ss_dssp SSCTTCCEEEEEECSTTCC-EEEEEETTCCEEEEETTT---CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEE
T ss_pred cCCCCceEEEEEECCCCCC-EEEEEeCCCeEEEEECCC---CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcE
Confidence 998 9999999999 77 699999999999999984 344555534 899999999999 99999999999999
Q ss_pred EEEecCCCCCCCceEEcccC----CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 391 HVWDLRRFKKGSSVATFKHH----TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h----~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
++||++ .++.+..+..+ ...+.++.|. ++ .++++++.|+.|++||+.... .+...
T Consensus 277 ~~wd~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~l~~~~~~g~i~~~d~~~~~----------------~~~~~ 335 (615)
T 1pgu_A 277 RVWDVT---TSKCVQKWTLDKQQLGNQQVGVVAT-GN-GRIISLSLDGTLNFYELGHDE----------------VLKTI 335 (615)
T ss_dssp EEEETT---TTEEEEEEECCTTCGGGCEEEEEEE-ET-TEEEEEETTSCEEEEETTEEE----------------EEEEE
T ss_pred EEEECC---CCcEEEEEcCCCCcccCceeEEEeC-CC-CeEEEEECCCCEEEEECCCCc----------------EEEEE
Confidence 999998 46677777766 4678899886 44 699999999999999998752 23333
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeec
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~ 546 (812)
..+...|.+++| |+ +++++.++....+... .+. ..+...|.+++|.+. ..+++++.++. +.+
T Consensus 336 ~~~~~~v~~~~~-~~----l~~~~~dg~i~~w~~~-----~~~-~~~~~~v~~~~~~~~--~~l~~~~~d~~-----i~~ 397 (615)
T 1pgu_A 336 SGHNKGITALTV-NP----LISGSYDGRIMEWSSS-----SMH-QDHSNLIVSLDNSKA--QEYSSISWDDT-----LKV 397 (615)
T ss_dssp CCCSSCEEEEET-TT----TEEEETTSCEEETTTT-----EEE-CCCCSCEEEEECCST--TCCEEEETTTE-----EEE
T ss_pred eCCCCCEEEEEe-cC----cEEECCCCeEEEEEch-----hhc-CcccCceEEEEECCC--cEEEEEeCCCC-----EEE
Confidence 345568999999 76 5555555544333333 122 455667888888333 34444443321 111
Q ss_pred ccCc-----------------------------------------------------------cccc-ccccccccccCC
Q psy4510 547 SNLT-----------------------------------------------------------STEE-DNERELEDDESE 566 (812)
Q Consensus 547 ~~l~-----------------------------------------------------------~~~~-~~~~~~~~~~~~ 566 (812)
|++. .+.. ++.+.+|+..
T Consensus 398 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~-- 475 (615)
T 1pgu_A 398 NGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLS-- 475 (615)
T ss_dssp TTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETT--
T ss_pred EEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECC--
Confidence 1111 1111 2333333222
Q ss_pred CCCCccccCCCccc-eEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCC
Q psy4510 567 GSGDEDRRKDPVMN-SYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIP 645 (812)
Q Consensus 567 ~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 645 (812)
..... ..+..|...|.+++|+|++++|+++ +.||.|++|++.++.
T Consensus 476 ---------~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~--~~dg~i~iw~~~~~~----------------------- 521 (615)
T 1pgu_A 476 ---------DLEVSFDLKTPLRAKPSYISISPSETYIAAG--DVMGKILLYDLQSRE----------------------- 521 (615)
T ss_dssp ---------EEEEEEECSSCCSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTTTE-----------------------
T ss_pred ---------CccccccccCCccCceEEEEECCCCCEEEEc--CCCCeEEEeeCCCCc-----------------------
Confidence 01111 4456788999999999999999998 899999999999876
Q ss_pred CCCeeeecC-CCCceEEEEeCCC---------CCCeEEecCCCceEEEEecCCC-c----------eeEEEEecCCCCEE
Q psy4510 646 TPPLFSFSG-HLTEGFAMDWSST---------EPGVLATGDCKRNIHIWTPREA-G----------AWSVYLYTNRFGVL 704 (812)
Q Consensus 646 ~~~~~~~~g-h~~~V~~l~~sp~---------~~~~las~s~Dg~v~iWd~~~~-~----------~~~~~~~s~dg~~l 704 (812)
++..+.+ |...|++++|+|. ++.+||+++.||+|++|++.++ + .+..++|+|+++ |
T Consensus 522 --~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~~s~~~~-l 598 (615)
T 1pgu_A 522 --VKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPST-L 598 (615)
T ss_dssp --EEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTE-E
T ss_pred --ceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEEEcCCCC-e
Confidence 5667777 9999999999993 4779999999999999999885 2 234567899999 9
Q ss_pred EeecCCCeEEEeecCC
Q psy4510 705 ATGDCKRNIHIWTPRE 720 (812)
Q Consensus 705 asgs~dg~i~iwd~~~ 720 (812)
++++.||+|++|++.+
T Consensus 599 ~s~~~d~~v~iw~~~~ 614 (615)
T 1pgu_A 599 VSSGADACIKRWNVVL 614 (615)
T ss_dssp EEEETTSCEEEEEEC-
T ss_pred EEecCCceEEEEeeec
Confidence 9999999999999864
No 11
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.8e-45 Score=434.92 Aligned_cols=540 Identities=10% Similarity=0.050 Sum_probs=359.3
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|...|.+++|+| +++||+++.|++|+|||+.+++ ....+. |...|++++|+|++++|++|+.||.|++||+.
T Consensus 56 ~~~~~V~~l~fsp--g~~L~S~s~D~~v~lWd~~~~~----~~~~~~-~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~ 128 (902)
T 2oaj_A 56 EDRSAIKEMRFVK--GIYLVVINAKDTVYVLSLYSQK----VLTTVF-VPGKITSIDTDASLDWMLIGLQNGSMIVYDID 128 (902)
T ss_dssp SSCCCEEEEEEET--TTEEEEEETTCEEEEEETTTCS----EEEEEE-CSSCEEEEECCTTCSEEEEEETTSCEEEEETT
T ss_pred CCCCCEEEEEEcC--CCEEEEEECcCeEEEEECCCCc----EEEEEc-CCCCEEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 5778999999999 5699999999999999999876 334443 77899999999999999999999999999998
Q ss_pred CCCCCCCCCCCc-----------eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc------
Q psy4510 254 RGKGPGIPTPPL-----------FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV------ 316 (812)
Q Consensus 254 ~~~~~~~~~~~~-----------~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~------ 316 (812)
++ ... ..+.+|.+.|.+++|+|++...|++|+.||.| +||++++.. ...+.
T Consensus 129 ~~-------~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~----~~~~~~~~~~g 196 (902)
T 2oaj_A 129 RD-------QLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEI----KQSFIYELPPF 196 (902)
T ss_dssp TT-------EEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEE----EEEECCCBCTT
T ss_pred CC-------ccccceeccccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCce----EEEEecccCCc
Confidence 75 211 23478999999999999765789999999999 999988752 23333
Q ss_pred ------------CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--ecC--C-------------cCCC
Q psy4510 317 ------------GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML--TLP--N-------------AHTS 367 (812)
Q Consensus 317 ------------~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~--~-------------~~~~ 367 (812)
+|...|++++|+|++. +|++|+.||+|++||++++. ++. .+. . .|..
T Consensus 197 ~~~~~~~~~~~~~h~~~V~~v~fspdg~-~lasgs~Dg~i~lWd~~~g~---~~~~r~l~~~~~~~~~~~~~~~~~~~~~ 272 (902)
T 2oaj_A 197 APGGDFSEKTNEKRTPKVIQSLYHPNSL-HIITIHEDNSLVFWDANSGH---MIMARTVFETEINVPQPDYIRDSSTNAA 272 (902)
T ss_dssp CCCSTTCCCTTSCBCCCEEEEEECTTSS-EEEEEETTCCEEEEETTTCC---EEEEECSSCSCTTSCCTTCCCCCSSCCC
T ss_pred CCCcccccccccccCCCeEEEEEcCCCC-EEEEEECCCeEEEEECCCCc---EEEEEeecccccCCCCCcCCCCCccccC
Confidence 3467899999999998 69999999999999998543 222 110 1 2355
Q ss_pred CeEEEEEc----CCC-CEEEEEeCC-----CcEEEEecCCC---------------CCCCceEEcc-cCCCCEEEEEEcc
Q psy4510 368 DVNVISWN----RTE-PLIVSGGDD-----GCIHVWDLRRF---------------KKGSSVATFK-HHTAPVTTVEWHP 421 (812)
Q Consensus 368 ~v~~l~~~----~~~-~~l~sg~~d-----g~i~iwd~~~~---------------~~~~~~~~~~-~h~~~v~~v~~~p 421 (812)
.|++++|+ |++ .+|++|+.+ +.+++|++... ........+. .|...|..+.+.|
T Consensus 273 ~V~~v~w~~~~~pd~~~ll~sg~~~~~~~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 352 (902)
T 2oaj_A 273 KISKVYWMCENNPEYTSLLISHKSISRGDNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIP 352 (902)
T ss_dssp EEEEEEEEECSSTTEEEEEEEEECSTTSSCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECC
T ss_pred CeeEEEEEecCCCCCCEEEEeCCCCCCCCCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECC
Confidence 79999995 444 478888765 37999985310 0112233333 4678899999866
Q ss_pred C---------CCcEEEEEECCCCEEEEEcCCCCchhHH-HhhhhhccCCCceE---E---------------------ee
Q psy4510 422 T---------ESSTFASGGADDQIALWDLAVERDSEIE-QREAELKDLPSQLL---F---------------------IH 467 (812)
Q Consensus 422 ~---------~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~~~~~~~~~~~---~---------------------~~ 467 (812)
+ ++..+++++.|+.|++||+..+...... .....+....+.+. + ..
T Consensus 353 ~~sp~~~g~~d~~~l~~~s~dg~l~~~~~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~ 432 (902)
T 2oaj_A 353 RQSPYFAGCHNPGLILLILGNGEIETMLYPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLK 432 (902)
T ss_dssp SSCSHHHHTBSCSEEEEEETTSCEEEEETTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCC
T ss_pred CCCCCcCCCCCceeEEEEcCCCcEEEEECCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCccc
Confidence 2 3347888999999999999654211000 00000000000000 0 11
Q ss_pred cCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcc---cEEe-------ecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 468 LGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQ---LLFI-------HLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 468 ~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-------~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
.+...+..++|+|++. ++++++.|+...+|........ .+.. ..+...|.+++|+|++ .+++++..+
T Consensus 433 G~~~~v~sv~~spdg~-~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg--~~LAsgs~D 509 (902)
T 2oaj_A 433 GGVRTKRQKLPAEYGT-AFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAET--LELAVSIET 509 (902)
T ss_dssp CSBCCCCCCCCCSEEE-EEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTT--TEEEEEETT
T ss_pred CCcCCCCcccccccCc-EEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCC--CeEEEEecC
Confidence 2223566778888764 6677777775544444433321 1111 1455789999999995 444444332
Q ss_pred --ceEEEEeecccCcc----ccccccccccc--ccCCCCC--------CccccCCCccceEEecccceEEEEEEeccCCe
Q psy4510 538 --FNIFRTISMSNLTS----TEEDNERELED--DESEGSG--------DEDRRKDPVMNSYFIRHRGCINRVRTCQYGST 601 (812)
Q Consensus 538 --~~~~~~~~~~~l~~----~~~~~~~~~~~--~~~~~~~--------~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~ 601 (812)
..+|..-....... ........... ....... .........+...+.+|.+.|++++|||+| +
T Consensus 510 gtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~ 588 (902)
T 2oaj_A 510 GDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-F 588 (902)
T ss_dssp SCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-E
T ss_pred cEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-E
Confidence 22222211100000 00000000000 0000000 000000012345677899999999999999 9
Q ss_pred EEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec-CCCCceEEEEeC-----CCC--CCeEE
Q psy4510 602 TLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWS-----STE--PGVLA 673 (812)
Q Consensus 602 l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-gh~~~V~~l~~s-----p~~--~~~la 673 (812)
|++| +.|++|+|||+.+...... ..+..+. +|.+.|++|+|+ |++ +.+|+
T Consensus 589 lAsg--s~D~tv~lwd~~~~~~~~~--------------------~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~ 646 (902)
T 2oaj_A 589 VGIA--YAAGSLMLIDRRGPAIIYM--------------------ENIREISGAQSACVTCIEFVIMEYGDDGYSSILMV 646 (902)
T ss_dssp EEEE--ETTSEEEEEETTTTEEEEE--------------------EEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEE
T ss_pred EEEE--eCCCcEEEEECCCCeEEEE--------------------eehhHhccccccceEEEEEEEEecCCCCCcceEEE
Confidence 9998 8999999999877541000 0012343 899999999999 832 48999
Q ss_pred ecCCCceEEEEec---CCCc----------------eeEEEEec----------------------CCCCEEEeecCCCe
Q psy4510 674 TGDCKRNIHIWTP---REAG----------------AWSVYLYT----------------------NRFGVLATGDCKRN 712 (812)
Q Consensus 674 s~s~Dg~v~iWd~---~~~~----------------~~~~~~~s----------------------~dg~~lasgs~dg~ 712 (812)
+|+.|++|++||+ .+|+ ++.+..|+ +++.+||++ +..
T Consensus 647 sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~~~~~~~~~a~~~~~~~l~~~~~~~~~~l~~~--~~~ 724 (902)
T 2oaj_A 647 CGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFSKETKSSCLATIPKMQNLSKGLCIPGIVLITG--FDD 724 (902)
T ss_dssp EEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEETTTCCBCBCBHHHHHGGGGTCCCCEEEEEEC--SSE
T ss_pred EEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEecCCCCcccCCHHHHhccCCCCCCCeEEEEEe--ccc
Confidence 9999999999999 4433 33444344 566677776 778
Q ss_pred EEEeecCCCCCcccccccccCCCcceeEe---E------EecCCceeEEeeccCCceEEeeecCcc
Q psy4510 713 IHIWTPREAGAWQVDQKPLVGHTNSVEDL---Q------WSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 713 i~iwd~~~~~~~~~~~~~~~gH~~~V~~l---~------fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
||||++.++++ .+...+|...+.++ . |+++|. .|++++.||+|++|++.+.+
T Consensus 725 ir~~~~~~~k~----~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~-~l~~~~~~g~i~~~s~p~l~ 785 (902)
T 2oaj_A 725 IRLITLGKSKS----THKGFKYPLAATGLSYISTVEKNNDRKNLT-VIITLEINGHLRVFTIPDFK 785 (902)
T ss_dssp EEEECTTCCCE----EEEECSSCEEEEEEEEEEEECSSSCEEEEE-EEEEEETTSEEEEEETTTCC
T ss_pred eEEEeCccccc----eeeEcccceeeeEEEEEEeccccccccCce-EEEEEeCCCcEEEEECcchH
Confidence 99999999874 44556676667776 6 789998 89999999999999998887
No 12
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=1.2e-46 Score=411.10 Aligned_cols=365 Identities=18% Similarity=0.299 Sum_probs=280.6
Q ss_pred CCCCCeeeeChhHHhhhhccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCc
Q psy4510 60 LDKGESLVYDPSAYVMLHEAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNER 139 (812)
Q Consensus 60 ~~~~~~~~~d~~~y~~~~~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~ 139 (812)
|+++.++. |+|+|.+.++||||++||+|+..+..++.|| ++++++||++.+ +.|+|+++++. ++....+.+
T Consensus 28 wk~n~~~~-----y~~~~~~~l~wp~l~~~~~p~~~~~~~~~~~-~~~~~~GT~t~~-~~n~i~i~~~~-lp~~~~~~~- 98 (430)
T 2xyi_A 28 WKKNTPFL-----YDLVMTHALEWPSLTAQWLPDVTKQDGKDYS-VHRLILGTHTSD-EQNHLLIASVQ-LPSEDAQFD- 98 (430)
T ss_dssp HHHHHHHH-----EEEEEEEECSSCCSCEEECSCCEECTTCSCE-EEEEEEECCCSS-SCEEEEEEEEE-EC--------
T ss_pred HhhCChHH-----HHHHhhcCCCCCceEEEECcccccccCCCcc-eEEEEEEEcCCC-CCCEEEEEEEE-CCCCccccc-
Confidence 56666654 5599999999999999999999888888898 589999999998 88999999987 433221111
Q ss_pred ccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc------cc
Q psy4510 140 ELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------WQ 213 (812)
Q Consensus 140 ~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~------~~ 213 (812)
. .+.|++++ +...+....+++. ..... +|.+.|++++|+|+++.+||+|+.+|.|+||++.+... ..
T Consensus 99 -~--~~~d~~~~-~~~~~~~~~~~~~--~~~~~-~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~ 171 (430)
T 2xyi_A 99 -G--SHYDNEKG-EFGGFGSVCGKIE--IEIKI-NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGEC 171 (430)
T ss_dssp -----------------------CEE--EEEEE-EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCC
T ss_pred -c--cccccccc-ccccccCCCCceE--EEEEE-cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccC
Confidence 1 11111111 1100111233332 23334 78899999999994488999999999999999986210 01
Q ss_pred ccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 214 VDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 214 ~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
.....+.+|...|.+++|+|+++ +|++++.||.|++|++..+........+...+.+|...|.+++|+|.+..+|++++
T Consensus 172 ~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~ 251 (430)
T 2xyi_A 172 QPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVA 251 (430)
T ss_dssp CCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEE
T ss_pred CCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEe
Confidence 25667789999999999999998 99999999999999998742111111235678899999999999996668999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.||.|++||+++.... .....+..|...|++++|+|+++++|++|+.||.|++||++.. ..++..+ ..|...|.++
T Consensus 252 ~dg~i~i~d~~~~~~~-~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~--~~~~~~~-~~h~~~v~~i 327 (430)
T 2xyi_A 252 DDQKLMIWDTRNNNTS-KPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNL--KLKLHSF-ESHKDEIFQV 327 (430)
T ss_dssp TTSEEEEEETTCSCSS-SCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT--TSCSEEE-ECCSSCEEEE
T ss_pred CCCeEEEEECCCCCCC-cceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCC--CCCeEEe-ecCCCCEEEE
Confidence 9999999999976311 1345567899999999999999888999999999999999953 2344555 6799999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCC-----------CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKK-----------GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
+|+|+++ +|++|+.||.|+|||++.... ...+..+.+|...|++++|+|+++.+|++++.||.|++|+
T Consensus 328 ~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~ 407 (430)
T 2xyi_A 328 QWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQ 407 (430)
T ss_dssp EECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEE
T ss_pred EECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeE
Confidence 9999996 899999999999999985221 2567788899999999999999866999999999999999
Q ss_pred cCCC
Q psy4510 441 LAVE 444 (812)
Q Consensus 441 ~~~~ 444 (812)
+...
T Consensus 408 ~~~~ 411 (430)
T 2xyi_A 408 MAEN 411 (430)
T ss_dssp ECHH
T ss_pred cccc
Confidence 9754
No 13
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=100.00 E-value=3.1e-42 Score=409.58 Aligned_cols=459 Identities=13% Similarity=0.117 Sum_probs=349.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
..+.+.+|...|++++|+|++++|++++.+|.|++|++.++ ..+..+.+|.+.|.+++|+|++ .+|++|+.|
T Consensus 5 ~~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~d 76 (814)
T 3mkq_A 5 IKKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQ-------VEVRSIQVTETPVRAGKFIARK-NWIIVGSDD 76 (814)
T ss_dssp CEEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTT-------EEEEEEECCSSCEEEEEEEGGG-TEEEEEETT
T ss_pred cceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCC-------ceEEEEecCCCcEEEEEEeCCC-CEEEEEeCC
Confidence 45678899999999999999999999999999999999875 7788899999999999999998 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
|.|++|++.++. ....+.+|.+.|++++|+|+++ .|++++.||.|++||++.. ......+ ..|...|.+++|
T Consensus 77 g~i~vw~~~~~~----~~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~vw~~~~~--~~~~~~~-~~~~~~v~~~~~ 148 (814)
T 3mkq_A 77 FRIRVFNYNTGE----KVVDFEAHPDYIRSIAVHPTKP-YVLSGSDDLTVKLWNWENN--WALEQTF-EGHEHFVMCVAF 148 (814)
T ss_dssp SEEEEEETTTCC----EEEEEECCSSCEEEEEECSSSS-EEEEEETTSEEEEEEGGGT--SEEEEEE-ECCSSCEEEEEE
T ss_pred CeEEEEECCCCc----EEEEEecCCCCEEEEEEeCCCC-EEEEEcCCCEEEEEECCCC--ceEEEEE-cCCCCcEEEEEE
Confidence 999999999887 5667788999999999999999 5999999999999999843 1233334 689999999999
Q ss_pred cC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-CCCEEEEEEcc--CCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 375 NR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHP--TESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 375 ~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~~p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+| ++++|++|+.||.|++||++. ......+..+ ...|..++|+| ++ .+|++++.||.|++||+....
T Consensus 149 ~p~~~~~l~~~~~dg~v~vwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~----- 219 (814)
T 3mkq_A 149 NPKDPSTFASGCLDRTVKVWSLGQ---STPNFTLTTGQERGVNYVDYYPLPDK-PYMITASDDLTIKIWDYQTKS----- 219 (814)
T ss_dssp ETTEEEEEEEEETTSEEEEEETTC---SSCSEEEECCCTTCCCEEEECCSTTC-CEEEEECTTSEEEEEETTTTE-----
T ss_pred EcCCCCEEEEEeCCCeEEEEECCC---CcceeEEecCCCCCEEEEEEEECCCC-CEEEEEeCCCEEEEEECCCCc-----
Confidence 99 788999999999999999974 4455555544 48999999999 65 699999999999999998763
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
.+.....+...|..++|+|+++ .+++++. +.+.+|+..... .......+...+.+++|+|++...
T Consensus 220 -----------~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~dg~v~vwd~~~~~--~~~~~~~~~~~v~~~~~~~~~~~~ 285 (814)
T 3mkq_A 220 -----------CVATLEGHMSNVSFAVFHPTLP-IIISGSEDGTLKIWNSSTYK--VEKTLNVGLERSWCIATHPTGRKN 285 (814)
T ss_dssp -----------EEEEEECCSSCEEEEEECSSSS-EEEEEETTSCEEEEETTTCS--EEEEECCSSSSEEEEEECTTCGGG
T ss_pred -----------EEEEEcCCCCCEEEEEEcCCCC-EEEEEeCCCeEEEEECCCCc--EEEEeecCCCcEEEEEEccCCCce
Confidence 2223334456899999999986 4555554 456666654432 222334455789999999996655
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
+++++.++... .+... .....+.++|+|+.++++ +.
T Consensus 286 ~~~~~~~~~~~--~~~~~----------------------------------------~~~~~~~~~~~g~~~~~~--~~ 321 (814)
T 3mkq_A 286 YIASGFDNGFT--VLSLG----------------------------------------NDEPTLSLDPVGKLVWSG--GK 321 (814)
T ss_dssp EEEEEETTEEE--EEECS----------------------------------------CCSCCEEECSSSEEEEEC--CT
T ss_pred EEEEEeCCCEE--EEEcC----------------------------------------CCCceeEECCCCCEEEEC--cc
Confidence 55555443211 11111 112346778888877776 33
Q ss_pred cce---EEE------EeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCce
Q psy4510 610 VGK---VGI------WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680 (812)
Q Consensus 610 dg~---I~i------wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~ 680 (812)
+.. +.. |++..+. ........+..|...+.+++|+| ++++|++++ |+.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~sp-dg~~la~~~-~~~ 378 (814)
T 3mkq_A 322 NAAASDIFTAVIRGNEEVEQDE---------------------PLSLQTKELGSVDVFPQSLAHSP-NGRFVTVVG-DGE 378 (814)
T ss_dssp TSCTTCEEEEECCSCCCCCSSS---------------------CBCCCCEEECCCSSCCSEEEECT-TSSEEEEEE-TTE
T ss_pred cccceeeeeeecccccccccCc---------------------cceeeeecCCCCccCCceeEECC-CCCEEEEec-CCE
Confidence 332 111 1111111 01113445667778899999999 888999988 899
Q ss_pred EEEEecCCCce-----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCC---ceeEE
Q psy4510 681 IHIWTPREAGA-----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE---KRVLA 752 (812)
Q Consensus 681 v~iWd~~~~~~-----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg---~~~L~ 752 (812)
+.+|++..... +..++|+|+|+++|+++.+|.|++|+ .+.+|...|.+++|+|+| + +|+
T Consensus 379 ~~i~~~~~~~~~~~~~i~~~~~spdg~~la~~~~~g~v~l~~------------~~~~~~~~v~~~~~s~dg~~~~-~l~ 445 (814)
T 3mkq_A 379 YVIYTALAWRNKAFGKCQDFVWGPDSNSYALIDETGQIKYYK------------NFKEVTSWSVPMHSAIDRLFSG-ALL 445 (814)
T ss_dssp EEEEETTTTEEEEEEECSEEEECTTSSCEEEECTTCCEEEEE------------TTEECTTCCCCCSSCCCEEECS-SSE
T ss_pred EEEEECccccccCCCceEEEEEeCCCCeEEEEeCCCcEEEEE------------CCCCccceEEcCCcCccceecc-eEE
Confidence 99999876322 23467899999999999999999995 356788889999999998 6 699
Q ss_pred eeccCCceEEeeecCcceEEEEeeeeeEEEeeecchhhhh
Q psy4510 753 SCSVDRSNRIGARRDMLYCFFVSLVHCIFVWLKYQLFVDV 792 (812)
Q Consensus 753 s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 792 (812)
+++.|++|++||+.++............+.|+....+|-+
T Consensus 446 ~~~~d~~v~~~d~~~~~~~~~~~~~~~~v~~s~dg~~la~ 485 (814)
T 3mkq_A 446 GVKSDGFVYFFDWDNGTLVRRIDVNAKDVIWSDNGELVMI 485 (814)
T ss_dssp EEEETTEEEEECTTTCCEEEEESSCEEEEEECTTSSEEEE
T ss_pred EEecCCEEEEEECCcCcEEEEEecCCCEEEEcCCCCEEEE
Confidence 9999999999999988743333222237778776655443
No 14
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.8e-41 Score=367.06 Aligned_cols=290 Identities=18% Similarity=0.359 Sum_probs=257.2
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|..+|++++|+|++++|++|+.|+.|++||+.++ ....++.+|.+.|.+++|+|++ .+|++|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~-------~~~~~l~~h~~~V~~v~~~~~~-~~l~sgs~D~ 172 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETG-------DFERTLKGHTDSVQDISFDHSG-KLLASCSADM 172 (410)
T ss_dssp SCEEECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTC-------CCCEEECCCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred eEeecccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------cEEEEEeccCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 4567899999999999999999999999999999999985 7788999999999999999998 7999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|++||+.+.. ....+.+|...|.+++|+|++. +|++|+.|++|++||+++ ..++..+ .+|...|.++.|+
T Consensus 173 ~i~iwd~~~~~----~~~~~~~h~~~V~~v~~~p~~~-~l~s~s~D~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 173 TIKLWDFQGFE----CIRTMHGHDHNVSSVSIMPNGD-HIVSASRDKTIKMWEVQT---GYCVKTF-TGHREWVRMVRPN 243 (410)
T ss_dssp CCCEEETTSSC----EEECCCCCSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEC
T ss_pred eEEEEeCCCCc----eeEEEcCCCCCEEEEEEeCCCC-EEEEEeCCCeEEEEECCC---CcEEEEE-eCCCccEEEEEEC
Confidence 99999998876 5677889999999999999998 699999999999999984 4556666 7899999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC-------------------CcEEEEEECCCCE
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE-------------------SSTFASGGADDQI 436 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-------------------~~~l~s~~~dg~v 436 (812)
|++.+|++|+.||.|++||++ .......+..|...|.+++|+|++ +.+|++|+.|+.|
T Consensus 244 ~~g~~l~s~s~D~~v~vwd~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i 320 (410)
T 1vyh_C 244 QDGTLIASCSNDQTVRVWVVA---TKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTI 320 (410)
T ss_dssp TTSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEE
T ss_pred CCCCEEEEEcCCCeEEEEECC---CCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeE
Confidence 999999999999999999998 467788899999999999999963 2478888888889
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKE 516 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (812)
++||+.+...
T Consensus 321 ~iwd~~~~~~---------------------------------------------------------------------- 330 (410)
T 1vyh_C 321 KMWDVSTGMC---------------------------------------------------------------------- 330 (410)
T ss_dssp EEEETTTTEE----------------------------------------------------------------------
T ss_pred EEEECCCCce----------------------------------------------------------------------
Confidence 9998865410
Q ss_pred eeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe
Q psy4510 517 IKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC 596 (812)
Q Consensus 517 i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s 596 (812)
...+.+|...|.+++|+
T Consensus 331 ---------------------------------------------------------------~~~~~~h~~~v~~v~~~ 347 (410)
T 1vyh_C 331 ---------------------------------------------------------------LMTLVGHDNWVRGVLFH 347 (410)
T ss_dssp ---------------------------------------------------------------EEEEECCSSCEEEEEEC
T ss_pred ---------------------------------------------------------------EEEEECCCCcEEEEEEc
Confidence 11233456688899999
Q ss_pred ccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecC
Q psy4510 597 QYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 676 (812)
Q Consensus 597 ~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s 676 (812)
|++++|+++ +.||.|++||+.++. ++..+.+|...|++++|+| ++.+|+||+
T Consensus 348 ~~g~~l~s~--s~D~~i~vwd~~~~~-------------------------~~~~~~~h~~~v~~l~~~~-~~~~l~sgs 399 (410)
T 1vyh_C 348 SGGKFILSC--ADDKTLRVWDYKNKR-------------------------CMKTLNAHEHFVTSLDFHK-TAPYVVTGS 399 (410)
T ss_dssp SSSSCEEEE--ETTTEEEEECCTTSC-------------------------CCEEEECCSSCEEEEEECS-SSSCEEEEE
T ss_pred CCCCEEEEE--eCCCeEEEEECCCCc-------------------------eEEEEcCCCCcEEEEEEcC-CCCEEEEEe
Confidence 999999998 899999999998775 6788999999999999999 788999999
Q ss_pred CCceEEEEec
Q psy4510 677 CKRNIHIWTP 686 (812)
Q Consensus 677 ~Dg~v~iWd~ 686 (812)
.||+|++|++
T Consensus 400 ~D~~i~vW~~ 409 (410)
T 1vyh_C 400 VDQTVKVWEC 409 (410)
T ss_dssp TTSEEEEEC-
T ss_pred CCCcEEEEeC
Confidence 9999999986
No 15
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.2e-41 Score=352.74 Aligned_cols=296 Identities=18% Similarity=0.296 Sum_probs=255.7
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
......+.+|.+.|++++|+| ++.+||+|+.||+|+|||+.++. ....+..|..+|.+++|+|++++|++++.|+
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp-~~~~l~s~~~dg~v~lWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHP-TEPWVLTTLYSGRVELWNYETQV----EVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECS-SSSEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred ceeEEeecCCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCc----eeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 345566779999999999999 99999999999999999998876 5677889999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++||+.++ +++..+.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++.. ....+.+|...|.++
T Consensus 78 ~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~sgs~D~~v~lWd~~~~~~---~~~~~~~h~~~v~~v 146 (304)
T 2ynn_A 78 RIRVFNYNTG-------EKVVDFEAHPDYIRSIAVHPTK-PYVLSGSDDLTVKLWNWENNWA---LEQTFEGHEHFVMCV 146 (304)
T ss_dssp EEEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEEGGGTTE---EEEEECCCCSCEEEE
T ss_pred EEEEEECCCC-------cEEEEEeCCCCcEEEEEEcCCC-CEEEEECCCCeEEEEECCCCcc---hhhhhcccCCcEEEE
Confidence 9999999985 7788999999999999999998 7999999999999999987642 345678999999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+|+|.+..+|++|+.||+|++||++... ....+...|...+..++|+| ++++|++|+.||.|++||++ .++.
T Consensus 147 ~~~p~~~~~l~sgs~D~~v~iwd~~~~~---~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~---~~~~ 220 (304)
T 2ynn_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQST---PNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ---TKSC 220 (304)
T ss_dssp EECTTCTTEEEEEETTSEEEEEETTCSS---CSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETT---TTEE
T ss_pred EECCCCCCEEEEEeCCCeEEEEECCCCC---ccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCC---CCcc
Confidence 9999654479999999999999998533 33444456778899999987 56799999999999999998 5778
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLP 483 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~ 483 (812)
+..+.+|...|.+++|+|++ .+|++|+.||+|++||+.+.+ .......+...+.+++|+|++.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~-~~l~s~s~Dg~i~iWd~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~ 283 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTL-PIIISGSEDGTLKIWNSSTYK----------------VEKTLNVGLERSWCIATHPTGR 283 (304)
T ss_dssp EEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC----------------EEEEECCSSSSEEEEEECTTCG
T ss_pred ceeeCCCCCCEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc----------------eeeeccCCCccEEEEEECCCCC
Confidence 99999999999999999997 599999999999999998873 2223334456899999999876
Q ss_pred C-EEEEEeCCCeEEEEeC
Q psy4510 484 G-TIISTANSGFNIFRTI 500 (812)
Q Consensus 484 ~-~~~~~~~~~~~~~~~~ 500 (812)
. +++++..++..+|...
T Consensus 284 ~~~~asg~~~g~~~~~~~ 301 (304)
T 2ynn_A 284 KNYIASGFDNGFTVLSLG 301 (304)
T ss_dssp GGCEEEEETTEEEEEECC
T ss_pred ceEEEEecCCceEEEEec
Confidence 5 4788888888877654
No 16
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=2.1e-41 Score=366.59 Aligned_cols=250 Identities=21% Similarity=0.384 Sum_probs=228.7
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
...+.||.++|++++|+| ++.+||+|+.||+|+|||+.+++ ....+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 101 ~~~l~gh~~~V~~~~~~p-~~~~l~s~s~Dg~i~vwd~~~~~----~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~ 175 (410)
T 1vyh_C 101 KYALSGHRSPVTRVIFHP-VFSVMVSASEDATIKVWDYETGD----FERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 175 (410)
T ss_dssp SCEEECCSSCEEEEEECS-SSSEEEEEESSSCEEEEETTTCC----CCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred eEeecccCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCc----EEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 445669999999999999 99999999999999999999887 6678899999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||+.++ .++.++.+|...|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|.+++|+
T Consensus 176 iwd~~~~-------~~~~~~~~h~~~V~~v~~~p~~-~~l~s~s~D~~i~~wd~~~~~----~~~~~~~h~~~v~~~~~~ 243 (410)
T 1vyh_C 176 LWDFQGF-------ECIRTMHGHDHNVSSVSIMPNG-DHIVSASRDKTIKMWEVQTGY----CVKTFTGHREWVRMVRPN 243 (410)
T ss_dssp EEETTSS-------CEEECCCCCSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEEEEEC
T ss_pred EEeCCCC-------ceeEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEeCCCccEEEEEEC
Confidence 9999874 7788899999999999999998 899999999999999999887 567788999999999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--------------------CCEEEEEeCCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--------------------EPLIVSGGDDG 388 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--------------------~~~l~sg~~dg 388 (812)
|++. +|++|+.||+|++||+++ ..+...+ ..|...|.+++|+|+ +.+|++|+.||
T Consensus 244 ~~g~-~l~s~s~D~~v~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~ 318 (410)
T 1vyh_C 244 QDGT-LIASCSNDQTVRVWVVAT---KECKAEL-REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK 318 (410)
T ss_dssp TTSS-EEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS
T ss_pred CCCC-EEEEEcCCCeEEEEECCC---CceeeEe-cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC
Confidence 9998 799999999999999984 4455555 789999999999996 66999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++ .+..+..+.+|...|++++|+|++ .+|++|+.|+.|++||+...
T Consensus 319 ~i~iwd~~---~~~~~~~~~~h~~~v~~v~~~~~g-~~l~s~s~D~~i~vwd~~~~ 370 (410)
T 1vyh_C 319 TIKMWDVS---TGMCLMTLVGHDNWVRGVLFHSGG-KFILSCADDKTLRVWDYKNK 370 (410)
T ss_dssp EEEEEETT---TTEEEEEEECCSSCEEEEEECSSS-SCEEEEETTTEEEEECCTTS
T ss_pred eEEEEECC---CCceEEEEECCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC
Confidence 99999998 577889999999999999999987 68999999999999998655
No 17
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.7e-41 Score=358.28 Aligned_cols=325 Identities=16% Similarity=0.180 Sum_probs=229.8
Q ss_pred eEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCC
Q psy4510 230 QWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPR 303 (812)
Q Consensus 230 ~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~ 303 (812)
.+.+++.++ .++.+.....|++... ....|...|.+++|+|+| .+|++|+. |+.|++|+..
T Consensus 12 d~g~~~~~~-~~~g~~~~~~w~~p~~-----------~p~~H~~~V~~v~fSpDG-~~las~s~d~~~~wd~~v~~~~~~ 78 (357)
T 4g56_B 12 DLGTENLYF-QSNGSSKGSAWGRPVT-----------APACMEVQIGAVRYRRDG-ALLLAASSLSSRTWGGSIWVFKDP 78 (357)
T ss_dssp ----------------------------------------CCCSEEEEEEECSSS-CEEEEEECSSSSSCCEEEEEESSC
T ss_pred CCCccceEE-ecCCCccccccCCCCC-----------CcccccCCEEEEEECCCC-CEEEEEcCCCCccccCeEEEEECC
Confidence 333444443 3344566778876542 234799999999999999 89999997 7889999988
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
++...........+|...|.+++|+|++. +++++.||+|+|||+.++...........+|...|++++|+|++++|++
T Consensus 79 ~~~~~~~~~~~~~~~~~~V~~~~~s~d~~--~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s 156 (357)
T 4g56_B 79 EGAPNESLCTAGVQTEAGVTDVAWVSEKG--ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVS 156 (357)
T ss_dssp C---CGGGCSEEEECSSCEEEEEEETTTE--EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEE
T ss_pred CCCcceeEecccCCCCCCEEEEEEcCCCC--EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEE
Confidence 77532223344567889999999999985 6678899999999998654332222222579999999999999999999
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
|+.||.|++||++ .++.+..+.+|...|++++|+|++..++++++.|++|++||+++.+.. .
T Consensus 157 gs~dg~v~iwd~~---~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~--------------~- 218 (357)
T 4g56_B 157 GGKDFSVKVWDLS---QKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPA--------------T- 218 (357)
T ss_dssp EETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCB--------------C-
T ss_pred EeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCcee--------------e-
Confidence 9999999999998 577889999999999999999998779999999999999999876320 0
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRT 543 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~ 543 (812)
T Consensus 219 -------------------------------------------------------------------------------- 218 (357)
T 4g56_B 219 -------------------------------------------------------------------------------- 218 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC-eEEEEeecCcceEEEEeccccc
Q psy4510 544 ISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS-TTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 544 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
......|...+.+++|+|++. +++++ +.|+.|++||+.++.
T Consensus 219 ------------------------------------~~~~~~~~~~v~~v~~sp~~~~~la~g--~~d~~i~~wd~~~~~ 260 (357)
T 4g56_B 219 ------------------------------------RIDFCASDTIPTSVTWHPEKDDTFACG--DETGNVSLVNIKNPD 260 (357)
T ss_dssp ------------------------------------BCCCTTCCSCEEEEEECTTSTTEEEEE--ESSSCEEEEESSCGG
T ss_pred ------------------------------------eeeeccccccccchhhhhcccceEEEe--ecccceeEEECCCCc
Confidence 000112233577788888755 55666 789999999998876
Q ss_pred cccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCC
Q psy4510 623 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFG 702 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~ 702 (812)
++..+.+|...|++++|+|+++.+||+|+.|++|+|||+.
T Consensus 261 -------------------------~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~--------------- 300 (357)
T 4g56_B 261 -------------------------SAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD--------------- 300 (357)
T ss_dssp -------------------------GCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT---------------
T ss_pred -------------------------EeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC---------------
Confidence 6788999999999999999555567777776666666653
Q ss_pred EEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEec-CCceeEEeeccCCceEEeeecCc
Q psy4510 703 VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 703 ~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~-dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+++ ++ ...+|.+.|++|+||| +++ +|||||.||+|++|++...
T Consensus 301 -----------------~~~----~~-~~~~H~~~V~~vafsP~d~~-~l~s~s~Dg~v~iW~~~~~ 344 (357)
T 4g56_B 301 -----------------FSE----VF-RDLSHRDFVTGVAWSPLDHS-KFTTVGWDHKVLHHHLPSE 344 (357)
T ss_dssp -----------------SCE----EE-EECCCSSCEEEEEECSSSTT-EEEEEETTSCEEEEECC--
T ss_pred -----------------CCc----Ee-EECCCCCCEEEEEEeCCCCC-EEEEEcCCCeEEEEECCCC
Confidence 333 12 2347999999999998 788 8999999999999999654
No 18
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=9.1e-41 Score=352.28 Aligned_cols=294 Identities=20% Similarity=0.307 Sum_probs=254.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|...|++++|+|++++|++++.|+.|++||+.++ .++..+..|...|.+++|+|++ .+|++|+.|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~-------~~~~~~~~~~~~v~~~~~s~~~-~~l~s~~~d 118 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTT-------NKVHAIPLRSSWVMTCAYAPSG-NYVACGGLD 118 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTC-------CEEEEEECSSSCEEEEEECTTS-SEEEEEETT
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCC-------CcceEeecCCccEEEEEECCCC-CEEEEEeCC
Confidence 45678899999999999999999999999999999999875 7788899999999999999999 899999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
+.|++|++.+..........+.+|.+.|.++.|++++. +++++.|++|++||+++ ..++..+ .+|...|.+++|
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~--l~s~s~d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~ 192 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQ--IVTSSGDTTCALWDIET---GQQTTTF-TGHTGDVMSLSL 192 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEETTE--EEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEE
T ss_pred CeEEEEECccCCCcceeEEEecCCCccEEEEEECCCCc--EEEEECCCcEEEEECCC---CcEEEEE-cCCCCceEEEEE
Confidence 99999999876532234566789999999999998874 89999999999999984 4455556 789999999999
Q ss_pred cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh
Q psy4510 375 NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA 454 (812)
Q Consensus 375 ~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~ 454 (812)
+|++++|++|+.||.|++||++ .+..+..+.+|...|++++|+|++ .+|++|+.|++|++||++..+.
T Consensus 193 ~~~~~~l~sg~~d~~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~d~~v~iwd~~~~~~-------- 260 (340)
T 1got_B 193 APDTRLFVSGACDASAKLWDVR---EGMCRQTFTGHESDINAICFFPNG-NAFATGSDDATCRLFDLRADQE-------- 260 (340)
T ss_dssp CTTSSEEEEEETTSCEEEEETT---TCSEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE--------
T ss_pred CCCCCEEEEEeCCCcEEEEECC---CCeeEEEEcCCcCCEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCcE--------
Confidence 9999999999999999999998 567888999999999999999987 6999999999999999976520
Q ss_pred hhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 455 ELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
+.... .
T Consensus 261 ---------~~~~~-------------------------------------------------------~---------- 266 (340)
T 1got_B 261 ---------LMTYS-------------------------------------------------------H---------- 266 (340)
T ss_dssp ---------EEEEC-------------------------------------------------------C----------
T ss_pred ---------EEEEc-------------------------------------------------------c----------
Confidence 00000 0
Q ss_pred CCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEE
Q psy4510 535 NSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVG 614 (812)
Q Consensus 535 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~ 614 (812)
..+...|.+++|+|+|++++++ +.||.|+
T Consensus 267 -------------------------------------------------~~~~~~v~~~~~s~~g~~l~~g--~~d~~i~ 295 (340)
T 1got_B 267 -------------------------------------------------DNIICGITSVSFSKSGRLLLAG--YDDFNCN 295 (340)
T ss_dssp -------------------------------------------------TTCCSCEEEEEECTTSSEEEEE--ETTSEEE
T ss_pred -------------------------------------------------CCcccceEEEEECCCCCEEEEE--CCCCeEE
Confidence 0011257889999999999998 8999999
Q ss_pred EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 615 IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 615 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+||+.+.. ++..+.+|.+.|.+++|+| ++.+||||+.|++|+|||
T Consensus 296 vwd~~~~~-------------------------~~~~~~~h~~~v~~~~~s~-dg~~l~s~s~D~~i~iWd 340 (340)
T 1got_B 296 VWDALKAD-------------------------RAGVLAGHDNRVSCLGVTD-DGMAVATGSWDSFLKIWN 340 (340)
T ss_dssp EEETTTCC-------------------------EEEEEECCSSCEEEEEECT-TSSCEEEEETTSCEEEEC
T ss_pred EEEcccCc-------------------------EeeEeecCCCcEEEEEEcC-CCCEEEEEcCCccEEecC
Confidence 99998775 6778999999999999999 888999999999999996
No 19
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.5e-41 Score=349.13 Aligned_cols=290 Identities=17% Similarity=0.268 Sum_probs=251.9
Q ss_pred cccCCCCCCeeeeeEcCC----CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 217 KPLGGHTNSAEDLQWSDL----KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~----~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
+.+.+|.+.|.+++|+++ +++|++|+.|++|++|++..+ .......+.+|...|.+++|+|++ .++++|+
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~-----~~~~~~~l~gh~~~v~~~~~~~~~-~~l~s~s 99 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDE-----RLDLQWSLEGHQLGVVSVDISHTL-PIAASSS 99 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETT-----EEEEEEEECCCSSCEEEEEECSSS-SEEEEEE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCC-----CeeeeeeeccCCCCEEEEEECCCC-CEEEEEe
Confidence 566799999999999985 568999999999999999764 223456789999999999999998 7999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++||+.++. ....+..|...+.+++|+|+++ +|++++.||.|++|+++.. .....+ ..|...|.++
T Consensus 100 ~D~~i~lWd~~~~~----~~~~~~~~~~~~~~~~~spdg~-~l~~g~~dg~v~i~~~~~~---~~~~~~-~~~~~~v~~~ 170 (321)
T 3ow8_A 100 LDAHIRLWDLENGK----QIKSIDAGPVDAWTLAFSPDSQ-YLATGTHVGKVNIFGVESG---KKEYSL-DTRGKFILSI 170 (321)
T ss_dssp TTSEEEEEETTTTE----EEEEEECCTTCCCCEEECTTSS-EEEEECTTSEEEEEETTTC---SEEEEE-ECSSSCEEEE
T ss_pred CCCcEEEEECCCCC----EEEEEeCCCccEEEEEECCCCC-EEEEEcCCCcEEEEEcCCC---ceeEEe-cCCCceEEEE
Confidence 99999999999876 4566778888999999999999 6999999999999999854 334445 5788899999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++|+.||.|++||++ .++.+..+.+|..+|.+++|+|++ .+|++++.|+.|++||++....
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~---~~~~~~~~~~h~~~v~~l~~spd~-~~l~s~s~dg~i~iwd~~~~~~------ 240 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIA---TGKLLHTLEGHAMPIRSLTFSPDS-QLLVTASDDGYIKIYDVQHANL------ 240 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT---TTEEEEEECCCSSCCCEEEECTTS-CEEEEECTTSCEEEEETTTCCE------
T ss_pred EECCCCCEEEEEcCCCeEEEEECC---CCcEEEEEcccCCceeEEEEcCCC-CEEEEEcCCCeEEEEECCCcce------
Confidence 999999999999999999999998 567888999999999999999987 6999999999999999875410
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
T Consensus 241 -------------------------------------------------------------------------------- 240 (321)
T 3ow8_A 241 -------------------------------------------------------------------------------- 240 (321)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcce
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK 612 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~ 612 (812)
...+.+|...|.+++|+|++++|+++ +.|++
T Consensus 241 -----------------------------------------------~~~~~~h~~~v~~~~~sp~~~~l~s~--s~D~~ 271 (321)
T 3ow8_A 241 -----------------------------------------------AGTLSGHASWVLNVAFCPDDTHFVSS--SSDKS 271 (321)
T ss_dssp -----------------------------------------------EEEECCCSSCEEEEEECTTSSEEEEE--ETTSC
T ss_pred -----------------------------------------------eEEEcCCCCceEEEEECCCCCEEEEE--eCCCc
Confidence 01233456688999999999999998 89999
Q ss_pred EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 613 VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 613 I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
|++||+.++. ++.++.+|...|++++|+| ++.+|++++.||+|+|||.
T Consensus 272 v~iwd~~~~~-------------------------~~~~~~~h~~~v~~v~~s~-~g~~l~s~~~d~~i~vwd~ 319 (321)
T 3ow8_A 272 VKVWDVGTRT-------------------------CVHTFFDHQDQVWGVKYNG-NGSKIVSVGDDQEIHIYDC 319 (321)
T ss_dssp EEEEETTTTE-------------------------EEEEECCCSSCEEEEEECT-TSSEEEEEETTCCEEEEEC
T ss_pred EEEEeCCCCE-------------------------EEEEEcCCCCcEEEEEECC-CCCEEEEEeCCCeEEEEeC
Confidence 9999999876 7888999999999999999 7889999999999999996
No 20
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.9e-42 Score=371.75 Aligned_cols=363 Identities=18% Similarity=0.266 Sum_probs=281.2
Q ss_pred CCCeeeeeEcCCCC-cEEEe----------eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE
Q psy4510 223 TNSAEDLQWSDLKT-ALQTV----------DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 223 ~~~V~~l~~s~~~~-~l~s~----------~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
...|.+++|+|+++ +|+++ +.|+.|++|++.++. ..+++..+ .|...|.+++|+|++ .+|++|
T Consensus 12 ~~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~----~~~~~~~~-~~~~~v~~~~~s~~~-~~l~~~ 85 (416)
T 2pm9_A 12 FSRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAAD----SEKPIASL-QVDSKFNDLDWSHNN-KIIAGA 85 (416)
T ss_dssp EEESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGG----GCSCSCCC-CCSSCEEEEEECSSS-SCEEEE
T ss_pred hhhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCC----CCcEEEEE-ecCCceEEEEECCCC-CeEEEE
Confidence 34788999999997 88999 889999999998752 11233333 588999999999998 799999
Q ss_pred eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC------cccceeecCCcC
Q psy4510 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN------TKSCMLTLPNAH 365 (812)
Q Consensus 292 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~------~~~~~~~~~~~~ 365 (812)
+.||.|++|++............+.+|...|.+++|+|++..+|++++.||.|++||++... ....+.. ...|
T Consensus 86 ~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~-~~~~ 164 (416)
T 2pm9_A 86 LDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQ-SMSS 164 (416)
T ss_dssp ESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCC-SCCS
T ss_pred ccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccccccccc-ccCC
Confidence 99999999999873211114667788999999999999844479999999999999998654 2112222 2578
Q ss_pred CCCeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEcccC------CCCEEEEEEccCCCcEEEEEECCC---C
Q psy4510 366 TSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH------TAPVTTVEWHPTESSTFASGGADD---Q 435 (812)
Q Consensus 366 ~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~s~~~dg---~ 435 (812)
...|.+++|+|+ +.+|++|+.||.|++||++ ..+.+..+..| ...|.+++|+|++..+|++++.|+ .
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~---~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLK---AKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETT---TTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECC---CCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 999999999999 6799999999999999998 46677777766 789999999999878999999998 9
Q ss_pred EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCC
Q psy4510 436 IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQK 515 (812)
Q Consensus 436 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (812)
|++||++.....
T Consensus 242 i~~~d~~~~~~~-------------------------------------------------------------------- 253 (416)
T 2pm9_A 242 ILIWDLRNANTP-------------------------------------------------------------------- 253 (416)
T ss_dssp CCEEETTSTTSC--------------------------------------------------------------------
T ss_pred EEEEeCCCCCCC--------------------------------------------------------------------
Confidence 999999765210
Q ss_pred CeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe-cccceEEEEE
Q psy4510 516 EIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI-RHRGCINRVR 594 (812)
Q Consensus 516 ~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~ 594 (812)
...+. +|...|.+++
T Consensus 254 ----------------------------------------------------------------~~~~~~~~~~~v~~~~ 269 (416)
T 2pm9_A 254 ----------------------------------------------------------------LQTLNQGHQKGILSLD 269 (416)
T ss_dssp ----------------------------------------------------------------SBCCCSCCSSCEEEEE
T ss_pred ----------------------------------------------------------------cEEeecCccCceeEEE
Confidence 00112 3555788899
Q ss_pred Eec-cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEE
Q psy4510 595 TCQ-YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLA 673 (812)
Q Consensus 595 ~s~-~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~la 673 (812)
|+| ++++++++ +.||.|++||+.++. ++..+.+|...|++++|+|+++.+|+
T Consensus 270 ~s~~~~~~l~s~--~~dg~v~~wd~~~~~-------------------------~~~~~~~~~~~v~~~~~s~~~~~~l~ 322 (416)
T 2pm9_A 270 WCHQDEHLLLSS--GRDNTVLLWNPESAE-------------------------QLSQFPARGNWCFKTKFAPEAPDLFA 322 (416)
T ss_dssp ECSSCSSCEEEE--ESSSEEEEECSSSCC-------------------------EEEEEECSSSCCCCEEECTTCTTEEE
T ss_pred eCCCCCCeEEEE--eCCCCEEEeeCCCCc-------------------------cceeecCCCCceEEEEECCCCCCEEE
Confidence 998 88889998 889999999998876 67889999999999999994338999
Q ss_pred ecCCCceEEEEecCCCceeEE------------EEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 674 TGDCKRNIHIWTPREAGAWSV------------YLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 674 s~s~Dg~v~iWd~~~~~~~~~------------~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
+++.|+.|++|++.++..... ..+.+.+..++.++..+.+ . + .....|...|+++
T Consensus 323 s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---------~-~~~~~~~~~~~~~ 389 (416)
T 2pm9_A 323 CASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVF---H---------L-QAPTWYGEPSPAA 389 (416)
T ss_dssp ECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSS---C---------C-CCCSTTCCCSCCC
T ss_pred EEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccc---c---------c-cCCccccCCccce
Confidence 999999999999987542211 1122223333333322211 1 1 3445578889999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+|||+|+ +|++++.|++|+||++...
T Consensus 390 ~~s~dg~-~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 390 HWAFGGK-LVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp EEETTTE-EECBCTTSSCBCCBCCCCC
T ss_pred EEeeCCe-EEEEeCCCCeEEEEEeccC
Confidence 9999999 8999999999999998754
No 21
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=6.8e-40 Score=344.33 Aligned_cols=309 Identities=14% Similarity=0.153 Sum_probs=237.8
Q ss_pred EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC----CCCCCCCCCceEEcCCCCcEE
Q psy4510 201 IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG----KGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 201 v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~----~~~~~~~~~~~~~~~h~~~v~ 276 (812)
.+.|++... ....|...|.+++|+|||++|++++ ++++++|+.... ...............|...|.
T Consensus 16 ~r~w~~~~~--------~~~~~~~~v~~~~fs~dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 86 (344)
T 4gqb_B 16 AREWNLPPN--------APACMERQLEAARYRSDGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVA 86 (344)
T ss_dssp -------CC--------SCSSCCSEEEEEEECTTSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEE
T ss_pred ccccCCCCC--------CcccccCCEEEEEECCCCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEE
Confidence 456765432 2345778899999999999998887 778888873210 000000111223334677899
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
+++|+|+ +.|++|+.||+|+|||+.+++........+.+|.+.|++++|+|+++ +|++|+.||+|++||+++ ..
T Consensus 87 ~~~~s~d--~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~-~l~sgs~d~~i~iwd~~~---~~ 160 (344)
T 4gqb_B 87 DLTWVGE--RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGT-QAVSGSKDICIKVWDLAQ---QV 160 (344)
T ss_dssp EEEEETT--TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSS-EEEEEETTSCEEEEETTT---TE
T ss_pred EEEEeCC--CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCC-EEEEEeCCCeEEEEECCC---Cc
Confidence 9999998 47889999999999999988754444455678999999999999998 699999999999999984 45
Q ss_pred ceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcc--cCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 357 CMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 357 ~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
++..+ .+|...|++++|++++. +|++|+.||.|++||++. ++++..+. .|...+++++|+|++..+|++|+.|
T Consensus 161 ~~~~~-~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~d 236 (344)
T 4gqb_B 161 VLSSY-RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC---PKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDEN 236 (344)
T ss_dssp EEEEE-CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS---SSCEEECC----CCCEEEEEECSSCTTEEEEEETT
T ss_pred EEEEE-cCcCCceEEEEecCCCCCceeeeccccccccccccc---cceeeeeecceeeccceeeeecCCCCcceEEeccC
Confidence 56666 78999999999999985 899999999999999984 56666653 4566899999999888899999999
Q ss_pred CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC
Q psy4510 434 DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG 513 (812)
Q Consensus 434 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (812)
|.|++||+++.+.
T Consensus 237 g~v~~wd~~~~~~------------------------------------------------------------------- 249 (344)
T 4gqb_B 237 GTVSLVDTKSTSC------------------------------------------------------------------- 249 (344)
T ss_dssp SEEEEEESCC--C-------------------------------------------------------------------
T ss_pred CcEEEEECCCCcE-------------------------------------------------------------------
Confidence 9999999876521
Q ss_pred CCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEE
Q psy4510 514 QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRV 593 (812)
Q Consensus 514 ~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 593 (812)
...+.+|...|+++
T Consensus 250 ------------------------------------------------------------------~~~~~~h~~~v~~v 263 (344)
T 4gqb_B 250 ------------------------------------------------------------------VLSSAVHSQCVTGL 263 (344)
T ss_dssp ------------------------------------------------------------------CEEEECCSSCEEEE
T ss_pred ------------------------------------------------------------------EEEEcCCCCCEEEE
Confidence 11244566688899
Q ss_pred EEeccCC-eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE
Q psy4510 594 RTCQYGS-TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 672 (812)
Q Consensus 594 ~~s~~g~-~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l 672 (812)
+|+|++. +|+++ +.|++|+|||+.+++ +..+.+|.+.|++|+|+|++..+|
T Consensus 264 ~fsp~g~~~lasg--s~D~~i~vwd~~~~~--------------------------~~~~~~H~~~V~~v~~sp~~~~ll 315 (344)
T 4gqb_B 264 VFSPHSVPFLASL--SEDCSLAVLDSSLSE--------------------------LFRSQAHRDFVRDATWSPLNHSLL 315 (344)
T ss_dssp EECSSSSCCEEEE--ETTSCEEEECTTCCE--------------------------EEEECCCSSCEEEEEECSSSTTEE
T ss_pred EEccCCCeEEEEE--eCCCeEEEEECCCCc--------------------------EEEEcCCCCCEEEEEEeCCCCeEE
Confidence 9999885 67777 899999999998775 446789999999999999655678
Q ss_pred EecCCCceEEEEecCCC
Q psy4510 673 ATGDCKRNIHIWTPREA 689 (812)
Q Consensus 673 as~s~Dg~v~iWd~~~~ 689 (812)
+|+|.|++|++|++.+.
T Consensus 316 as~s~D~~v~~w~v~~~ 332 (344)
T 4gqb_B 316 TTVGWDHQVVHHVVPTE 332 (344)
T ss_dssp EEEETTSCEEEEECCC-
T ss_pred EEEcCCCeEEEEECCCC
Confidence 89999999999998753
No 22
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=1.5e-39 Score=336.98 Aligned_cols=297 Identities=18% Similarity=0.268 Sum_probs=239.7
Q ss_pred CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.....++.+|.+.|.+++|+|++ .+|++|+.||+|++||+.++. ....+..|...|.+++|+|+++ +|++|+.|
T Consensus 3 l~~~~~~~~h~~~V~~~~fsp~~-~~l~s~~~dg~v~lWd~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~s~s~d 76 (304)
T 2ynn_A 3 LDIKKTFSNRSDRVKGIDFHPTE-PWVLTTLYSGRVELWNYETQV----EVRSIQVTETPVRAGKFIARKN-WIIVGSDD 76 (304)
T ss_dssp CCCEEEEEEECSCEEEEEECSSS-SEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEEEGGGT-EEEEEETT
T ss_pred ceeEEeecCCCCceEEEEECCCC-CEEEEEcCCCcEEEEECCCCc----eeEEeeccCCcEEEEEEeCCCC-EEEEECCC
Confidence 36678899999999999999999 899999999999999998876 5677888999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
++|++||+++ ..++..+ .+|...|++++|+|++++|++|+.||+|++||++. .......+.+|...|.+++|+|
T Consensus 77 ~~i~vwd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~--~~~~~~~~~~h~~~v~~v~~~p 150 (304)
T 2ynn_A 77 FRIRVFNYNT---GEKVVDF-EAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWEN--NWALEQTFEGHEHFVMCVAFNP 150 (304)
T ss_dssp SEEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGG--TTEEEEEECCCCSCEEEEEECT
T ss_pred CEEEEEECCC---CcEEEEE-eCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCC--CcchhhhhcccCCcEEEEEECC
Confidence 9999999984 4455666 78999999999999999999999999999999984 3345677899999999999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.++.+|++|+.|++|++||+..... ....
T Consensus 151 ~~~~~l~sgs~D~~v~iwd~~~~~~----------------~~~~----------------------------------- 179 (304)
T 2ynn_A 151 KDPSTFASGCLDRTVKVWSLGQSTP----------------NFTL----------------------------------- 179 (304)
T ss_dssp TCTTEEEEEETTSEEEEEETTCSSC----------------SEEE-----------------------------------
T ss_pred CCCCEEEEEeCCCeEEEEECCCCCc----------------ccee-----------------------------------
Confidence 7668999999999999999875521 0000
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 180 -------------------------------------------------------------------------------- 179 (304)
T 2ynn_A 180 -------------------------------------------------------------------------------- 179 (304)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccceEEEEEEec--cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCce
Q psy4510 582 YFIRHRGCINRVRTCQ--YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEG 659 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~--~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V 659 (812)
...|...+..+.|+| ++++++++ +.|++|++||+.++. ++.++.+|...|
T Consensus 180 -~~~~~~~v~~~~~~~~~~~~~l~s~--s~D~~i~iWd~~~~~-------------------------~~~~~~~h~~~v 231 (304)
T 2ynn_A 180 -TTGQERGVNYVDYYPLPDKPYMITA--SDDLTIKIWDYQTKS-------------------------CVATLEGHMSNV 231 (304)
T ss_dssp -ECCCTTCEEEEEECCSTTCCEEEEE--ETTSEEEEEETTTTE-------------------------EEEEEECCSSCE
T ss_pred -ccCCcCcEEEEEEEEcCCCCEEEEE--cCCCeEEEEeCCCCc-------------------------cceeeCCCCCCE
Confidence 001112344445544 66788888 899999999999876 788899999999
Q ss_pred EEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCccee
Q psy4510 660 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 739 (812)
Q Consensus 660 ~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~ 739 (812)
.+++|+| ++.+|++|+.||+|++||+ .+++ +..++.+|...|.
T Consensus 232 ~~~~~~p-~~~~l~s~s~Dg~i~iWd~--------------------------------~~~~----~~~~~~~~~~~~~ 274 (304)
T 2ynn_A 232 SFAVFHP-TLPIIISGSEDGTLKIWNS--------------------------------STYK----VEKTLNVGLERSW 274 (304)
T ss_dssp EEEEECS-SSSEEEEEETTSCEEEEET--------------------------------TTCC----EEEEECCSSSSEE
T ss_pred EEEEECC-CCCEEEEEcCCCeEEEEEC--------------------------------CCCc----eeeeccCCCccEE
Confidence 9999999 6666666666666655554 4444 4567788889999
Q ss_pred EeEEecCCcee-EEeeccCCceEEeeecC
Q psy4510 740 DLQWSPGEKRV-LASCSVDRSNRIGARRD 767 (812)
Q Consensus 740 ~l~fs~dg~~~-L~s~s~Dg~i~iWd~~~ 767 (812)
+++|+|+++.. ||+|+ |..+.+|++.+
T Consensus 275 ~~~~~~~~~~~~~asg~-~~g~~~~~~~~ 302 (304)
T 2ynn_A 275 CIATHPTGRKNYIASGF-DNGFTVLSLGN 302 (304)
T ss_dssp EEEECTTCGGGCEEEEE-TTEEEEEECC-
T ss_pred EEEECCCCCceEEEEec-CCceEEEEecc
Confidence 99999998644 56555 55577777754
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=8.1e-40 Score=345.62 Aligned_cols=328 Identities=19% Similarity=0.331 Sum_probs=251.4
Q ss_pred cccccCCCCC-CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCc-eEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 215 DQKPLGGHTN-SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL-FSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~-~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~-~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
....+.+|.. .|.+++|+|++++|++|+.|+.|++|++.++ ..... ....+|...|.+++|+|++ .+|++|+
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~-----~~~~~~~~~~~h~~~v~~~~~sp~g-~~l~s~s 80 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGD-----SWICKSVLSEGHQRTVRKVAWSPCG-NYLASAS 80 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETT-----EEEEEEEECSSCSSCEEEEEECTTS-SEEEEEE
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCC-----cceeeeeeccccCCcEEEEEECCCC-CEEEEEE
Confidence 4567889988 9999999999999999999999999999874 11112 2236899999999999998 8999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++|++..... .....+.+|...|.+++|+|+++ +|++|+.|++|++||++......++..+ ..|...|.++
T Consensus 81 ~D~~v~iw~~~~~~~--~~~~~~~~h~~~v~~v~~sp~~~-~l~s~s~D~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~ 156 (345)
T 3fm0_A 81 FDATTCIWKKNQDDF--ECVTTLEGHENEVKSVAWAPSGN-LLATCSRDKSVWVWEVDEEDEYECVSVL-NSHTQDVKHV 156 (345)
T ss_dssp TTSCEEEEEECCC-E--EEEEEECCCSSCEEEEEECTTSS-EEEEEETTSCEEEEEECTTSCEEEEEEE-CCCCSCEEEE
T ss_pred CCCcEEEEEccCCCe--EEEEEccCCCCCceEEEEeCCCC-EEEEEECCCeEEEEECCCCCCeEEEEEe-cCcCCCeEEE
Confidence 999999999887641 13567889999999999999998 6999999999999999865544455555 7899999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHh
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQR 452 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 452 (812)
+|+|++++|++|+.|+.|++||++... ......+.+|...|++++|+|++ .+|++++.|++|++||+......
T Consensus 157 ~~~p~~~~l~s~s~d~~i~~w~~~~~~-~~~~~~~~~h~~~v~~l~~sp~g-~~l~s~s~D~~v~iW~~~~~~~~----- 229 (345)
T 3fm0_A 157 VWHPSQELLASASYDDTVKLYREEEDD-WVCCATLEGHESTVWSLAFDPSG-QRLASCSDDRTVRIWRQYLPGNE----- 229 (345)
T ss_dssp EECSSSSCEEEEETTSCEEEEEEETTE-EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEEECTTCT-----
T ss_pred EECCCCCEEEEEeCCCcEEEEEecCCC-EEEEEEecCCCCceEEEEECCCC-CEEEEEeCCCeEEEeccccCCCC-----
Confidence 999999999999999999999997411 13457889999999999999997 69999999999999997543210
Q ss_pred hhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEE
Q psy4510 453 EAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIS 532 (812)
Q Consensus 453 ~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~ 532 (812)
..+.. . ..+ +. ...
T Consensus 230 ------------------~~~~~------------~-~~~-------------------------------~~--~~~-- 243 (345)
T 3fm0_A 230 ------------------QGVAC------------S-GSD-------------------------------PS--WKC-- 243 (345)
T ss_dssp ------------------TCCCC------------C-----------------------------------CE--EEE--
T ss_pred ------------------cccee------------e-ccC-------------------------------Cc--cce--
Confidence 00000 0 000 00 000
Q ss_pred eeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEe-cccceEEEEEEeccCCeEEEEeecCcc
Q psy4510 533 TANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFI-RHRGCINRVRTCQYGSTTLAGVWGEVG 611 (812)
Q Consensus 533 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~s~~g~~l~~~~~~~dg 611 (812)
...+. .|...|.+++|+|++..++++ +.|+
T Consensus 244 -----------------------------------------------~~~~~~~h~~~v~~v~~~~~~~~l~s~--~~d~ 274 (345)
T 3fm0_A 244 -----------------------------------------------ICTLSGFHSRTIYDIAWCQLTGALATA--CGDD 274 (345)
T ss_dssp -----------------------------------------------EEEECSSCSSCEEEEEECTTTCCEEEE--ETTS
T ss_pred -----------------------------------------------eEEecCCCCCcEEEEEEecCCCEEEEE--eCCC
Confidence 01111 256689999999999999998 7899
Q ss_pred eEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCc
Q psy4510 612 KVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 690 (812)
Q Consensus 612 ~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~ 690 (812)
.|++|+............ ........+|...|++|+|+|+++.+||||+.||+|++|++.+++
T Consensus 275 ~i~vw~~~~~~~~~~~~~----------------~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 275 AIRVFQEDPNSDPQQPTF----------------SLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp CEEEEEECTTSCTTSCCE----------------EEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred eEEEEEeCCCCCcceeeE----------------EEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 999999876531100000 001233468999999999999544689999999999999886543
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=1e-40 Score=357.70 Aligned_cols=310 Identities=21% Similarity=0.320 Sum_probs=253.8
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+.+.+.+|.+.|++++|+|++++|++|+.|++|++||..++ .....+.+|...|.+++|+|++ .+|++|+.|
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~-------~~~~~~~~h~~~v~~~~~s~~g-~~las~~~d 129 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTS-------QKTHAIKLHCPWVMECAFAPNG-QSVACGGLD 129 (380)
T ss_dssp EEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTT-------EEEEEEECCCTTCCCCEECTTS-SEEEECCSS
T ss_pred EeecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-------ccceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 55678999999999999999999999999999999999875 7788899999999999999999 899999999
Q ss_pred CcEEEEeCCCCCc---ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce-eecCCcCCCCeE
Q psy4510 295 RNIHIWTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM-LTLPNAHTSDVN 370 (812)
Q Consensus 295 g~i~vwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~ 370 (812)
+.|++|++.+... .......+.+|.+.|.+++|.|++...|++|+.|++|++||++++...... .....+|...|.
T Consensus 130 ~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~ 209 (380)
T 3iz6_a 130 SACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVL 209 (380)
T ss_dssp SCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEE
T ss_pred CcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeE
Confidence 9999999976421 111345678999999999999987667999999999999999854322111 112357899999
Q ss_pred EEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhH
Q psy4510 371 VISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEI 449 (812)
Q Consensus 371 ~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~ 449 (812)
+++|++ ++++|++|+.||.|++||++. ....+..+.+|.+.|++++|+|++ .+|++|+.|++|++||+++..
T Consensus 210 ~~~~~~~~~~~l~sgs~D~~v~~wd~~~--~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~i~lwd~~~~~---- 282 (380)
T 3iz6_a 210 SLSINSLNANMFISGSCDTTVRLWDLRI--TSRAVRTYHGHEGDINSVKFFPDG-QRFGTGSDDGTCRLFDMRTGH---- 282 (380)
T ss_dssp EEEECSSSCCEEEEEETTSCEEEEETTT--TCCCCEEECCCSSCCCEEEECTTS-SEEEEECSSSCEEEEETTTTE----
T ss_pred EEEeecCCCCEEEEEECCCeEEEEECCC--CCcceEEECCcCCCeEEEEEecCC-CeEEEEcCCCeEEEEECCCCc----
Confidence 999987 678999999999999999985 456788999999999999999987 699999999999999998762
Q ss_pred HHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCe
Q psy4510 450 EQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGT 529 (812)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~ 529 (812)
.+..... .+.
T Consensus 283 -------------~~~~~~~-----------------------------------------------------~~~---- 292 (380)
T 3iz6_a 283 -------------QLQVYNR-----------------------------------------------------EPD---- 292 (380)
T ss_dssp -------------EEEEECC-----------------------------------------------------CCS----
T ss_pred -------------EEEEecc-----------------------------------------------------ccc----
Confidence 1110000 000
Q ss_pred EEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecC
Q psy4510 530 IISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGE 609 (812)
Q Consensus 530 ~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~ 609 (812)
....+...|++++|+|+|+++++| +.
T Consensus 293 ----------------------------------------------------~~~~~~~~v~~~~~s~~g~~l~~g--~~ 318 (380)
T 3iz6_a 293 ----------------------------------------------------RNDNELPIVTSVAFSISGRLLFAG--YS 318 (380)
T ss_dssp ----------------------------------------------------SSCCSSCSCSEEEECSSSSEEEEE--CT
T ss_pred ----------------------------------------------------ccccccCceEEEEECCCCCEEEEE--EC
Confidence 000111257789999999999998 89
Q ss_pred cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee----cCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 610 VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF----SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 610 dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
||.|++||+..+. .+..+ .+|.+.|++++|+| ++.+|+||+.|++|+||+
T Consensus 319 dg~i~vwd~~~~~-------------------------~~~~~~~~~~~h~~~v~~l~~s~-dg~~l~sgs~D~~i~iW~ 372 (380)
T 3iz6_a 319 NGDCYVWDTLLAE-------------------------MVLNLGTLQNSHEGRISCLGLSS-DGSALCTGSWDKNLKIWA 372 (380)
T ss_dssp TSCEEEEETTTCC-------------------------EEEEECCSCSSCCCCCCEEEECS-SSSEEEEECTTSCEEEEE
T ss_pred CCCEEEEECCCCc-------------------------eEEEEecccCCCCCceEEEEECC-CCCEEEEeeCCCCEEEEe
Confidence 9999999998765 33333 68999999999999 788999999999999999
Q ss_pred cCCC
Q psy4510 686 PREA 689 (812)
Q Consensus 686 ~~~~ 689 (812)
+...
T Consensus 373 ~~~~ 376 (380)
T 3iz6_a 373 FSGH 376 (380)
T ss_dssp CCSS
T ss_pred cCCC
Confidence 8653
No 25
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=3e-40 Score=354.05 Aligned_cols=265 Identities=17% Similarity=0.288 Sum_probs=222.7
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
....+.||.+.|++++|+| ++++||||+.||+|+|||+.++. ....+.+|...|.+++|+|++++|++++.|+.+
T Consensus 58 ~~~~l~gH~~~V~~~~~sp-~~~~l~s~s~D~~v~iWd~~~~~----~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v 132 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTP-EKNWIVSASQDGRLIVWNALTSQ----KTHAIKLHCPWVMECAFAPNGQSVACGGLDSAC 132 (380)
T ss_dssp EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEETTTTE----EEEEEECCCTTCCCCEECTTSSEEEECCSSSCC
T ss_pred EeecccccccEEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCc----cceEEecCCCCEEEEEECCCCCEEEEeeCCCcE
Confidence 4556779999999999999 99999999999999999998876 567788999999999999999999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQ 326 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v~~~~ 326 (812)
++|++...............+.+|.+.+.++.|+|++...|++|+.|++|++||+.++....... ....+|...|.+++
T Consensus 133 ~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~ 212 (380)
T 3iz6_a 133 SIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLS 212 (380)
T ss_dssp EEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEE
T ss_pred EEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEE
Confidence 99999764322223345567899999999999999876789999999999999999887322111 12267999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|.+..+|++|+.||+|++||++.. ..++..+ .+|...|++++|+|++++|++|+.||+|++||++ .+..+..
T Consensus 213 ~~~~~~~~l~sgs~D~~v~~wd~~~~--~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~---~~~~~~~ 286 (380)
T 3iz6_a 213 INSLNANMFISGSCDTTVRLWDLRIT--SRAVRTY-HGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMR---TGHQLQV 286 (380)
T ss_dssp ECSSSCCEEEEEETTSCEEEEETTTT--CCCCEEE-CCCSSCCCEEEECTTSSEEEEECSSSCEEEEETT---TTEEEEE
T ss_pred eecCCCCEEEEEECCCeEEEEECCCC--CcceEEE-CCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECC---CCcEEEE
Confidence 98855458999999999999999842 2344555 7899999999999999999999999999999998 4556666
Q ss_pred cccCC-------CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 407 FKHHT-------APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 407 ~~~h~-------~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+..+. ..|++++|+|++ .+|++|+.||.|++||+...
T Consensus 287 ~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~dg~i~vwd~~~~ 330 (380)
T 3iz6_a 287 YNREPDRNDNELPIVTSVAFSISG-RLLFAGYSNGDCYVWDTLLA 330 (380)
T ss_dssp ECCCCSSSCCSSCSCSEEEECSSS-SEEEEECTTSCEEEEETTTC
T ss_pred ecccccccccccCceEEEEECCCC-CEEEEEECCCCEEEEECCCC
Confidence 65432 348999999997 69999999999999998755
No 26
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.6e-39 Score=339.86 Aligned_cols=291 Identities=17% Similarity=0.202 Sum_probs=237.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC-------CCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-------AGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~-------~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
+|...|.+++|+| +|++|++++ |+++++||... .............|...|.+++|+|++ .|++++.||.
T Consensus 28 ~~~~~v~~~~fs~-dG~~l~~~s-d~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~l~~~s~dg~ 104 (344)
T 4gqb_B 28 CMERQLEAARYRS-DGALLLGAS-SLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGER-GILVASDSGA 104 (344)
T ss_dssp SCCSEEEEEEECT-TSCEEEEEE-CCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETTT-EEEEEETTSE
T ss_pred cccCCEEEEEECC-CCCEEEEEe-CCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCCC-eEEEEECCCE
Confidence 5667899999999 999999988 67888886321 111111122233467889999999985 6889999999
Q ss_pred eEEeeCCCCCCCCCCCCCc----eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 247 LAEHNKKRGKGPGIPTPPL----FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~----~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
|+|||+.++ +.+ ..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|
T Consensus 105 v~lWd~~~~-------~~~~~~~~~~~~H~~~V~~v~~spdg-~~l~sgs~d~~i~iwd~~~~~----~~~~~~~h~~~V 172 (344)
T 4gqb_B 105 VELWELDEN-------ETLIVSKFCKYEHDDIVSTVSVLSSG-TQAVSGSKDICIKVWDLAQQV----VLSSYRAHAAQV 172 (344)
T ss_dssp EEEEEECTT-------SSCEEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCE
T ss_pred EEEEeccCC-------CceeEeeccccCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEcCcCCce
Confidence 999999886 333 2355899999999999999 899999999999999999886 677889999999
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~ 400 (812)
++++|+|++..+|++|+.||+|++||+++.. +...+. ..|...+++++|+|++ ++|++|+.||.|++||++ .
T Consensus 173 ~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~---~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~---~ 246 (344)
T 4gqb_B 173 TCVAASPHKDSVFLSCSEDNRILLWDTRCPK---PASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTK---S 246 (344)
T ss_dssp EEEEECSSCTTEEEEEETTSCEEEEETTSSS---CEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESC---C
T ss_pred EEEEecCCCCCceeeeccccccccccccccc---eeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECC---C
Confidence 9999999998789999999999999999543 333331 3566779999999965 589999999999999998 5
Q ss_pred CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcC
Q psy4510 401 GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHP 480 (812)
Q Consensus 401 ~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p 480 (812)
++++..+.+|...|++++|+|++..+|++|+.|++|++||+... ++.....+...|.+++|+|
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~-----------------~~~~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLS-----------------ELFRSQAHRDFVRDATWSP 309 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCC-----------------EEEEECCCSSCEEEEEECS
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCC-----------------cEEEEcCCCCCEEEEEEeC
Confidence 77889999999999999999998778999999999999999876 4555556667899999999
Q ss_pred CCCCEEEEEeCCCeEEEEeCCC
Q psy4510 481 QLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 481 ~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+++.++++++.|+..++|....
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~ 331 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPT 331 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC
T ss_pred CCCeEEEEEcCCCeEEEEECCC
Confidence 9988999998888766665544
No 27
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=1.9e-39 Score=338.51 Aligned_cols=289 Identities=19% Similarity=0.326 Sum_probs=246.5
Q ss_pred cCcCCCCCceEEEEeCCC---CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 170 FSFSGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~---~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
..+.+|.+.|++++|+|. ++.+||||+.|++|+||++..... .....+.+|...|.+++|++++.++++++.|+.
T Consensus 26 ~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~--~~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~ 103 (321)
T 3ow8_A 26 KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERL--DLQWSLEGHQLGVVSVDISHTLPIAASSSLDAH 103 (321)
T ss_dssp EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECSSSSEEEEEETTSE
T ss_pred eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCe--eeeeeeccCCCCEEEEEECCCCCEEEEEeCCCc
Confidence 344589999999999982 367999999999999999876531 134568999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+..|...+.+++|+|++ .+|++|+.+|.|++|++.++. ....+..|...|.+++
T Consensus 104 i~lWd~~~~-------~~~~~~~~~~~~~~~~~~spdg-~~l~~g~~dg~v~i~~~~~~~----~~~~~~~~~~~v~~~~ 171 (321)
T 3ow8_A 104 IRLWDLENG-------KQIKSIDAGPVDAWTLAFSPDS-QYLATGTHVGKVNIFGVESGK----KEYSLDTRGKFILSIA 171 (321)
T ss_dssp EEEEETTTT-------EEEEEEECCTTCCCCEEECTTS-SEEEEECTTSEEEEEETTTCS----EEEEEECSSSCEEEEE
T ss_pred EEEEECCCC-------CEEEEEeCCCccEEEEEECCCC-CEEEEEcCCCcEEEEEcCCCc----eeEEecCCCceEEEEE
Confidence 999999885 7788888999999999999999 899999999999999999887 4556778889999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|+++ +|++|+.||.|++||+++ ...+..+ .+|...|++++|+|++++|++|+.||.|++||++ ....+..
T Consensus 172 ~spdg~-~lasg~~dg~i~iwd~~~---~~~~~~~-~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~---~~~~~~~ 243 (321)
T 3ow8_A 172 YSPDGK-YLASGAIDGIINIFDIAT---GKLLHTL-EGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQ---HANLAGT 243 (321)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCCCEEEECTTSCEEEEECTTSCEEEEETT---TCCEEEE
T ss_pred ECCCCC-EEEEEcCCCeEEEEECCC---CcEEEEE-cccCCceeEEEEcCCCCEEEEEcCCCeEEEEECC---CcceeEE
Confidence 999999 699999999999999984 4455566 7899999999999999999999999999999998 4677889
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+.+|...|.+++|+|++ .+|++++.|++|++||+.+.. .+.....+...|.+++|+|++. .+
T Consensus 244 ~~~h~~~v~~~~~sp~~-~~l~s~s~D~~v~iwd~~~~~----------------~~~~~~~h~~~v~~v~~s~~g~-~l 305 (321)
T 3ow8_A 244 LSGHASWVLNVAFCPDD-THFVSSSSDKSVKVWDVGTRT----------------CVHTFFDHQDQVWGVKYNGNGS-KI 305 (321)
T ss_dssp ECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----------------EEEEECCCSSCEEEEEECTTSS-EE
T ss_pred EcCCCCceEEEEECCCC-CEEEEEeCCCcEEEEeCCCCE----------------EEEEEcCCCCcEEEEEECCCCC-EE
Confidence 99999999999999997 699999999999999998773 2223334456899999999976 45
Q ss_pred EEEeCCC-eEEEE
Q psy4510 487 ISTANSG-FNIFR 498 (812)
Q Consensus 487 ~~~~~~~-~~~~~ 498 (812)
++++.++ +.+|+
T Consensus 306 ~s~~~d~~i~vwd 318 (321)
T 3ow8_A 306 VSVGDDQEIHIYD 318 (321)
T ss_dssp EEEETTCCEEEEE
T ss_pred EEEeCCCeEEEEe
Confidence 5555554 56665
No 28
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=2.6e-39 Score=342.99 Aligned_cols=295 Identities=14% Similarity=0.184 Sum_probs=240.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecC------CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~------dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
+|...|.+++||| +|++||+|+. |+.|++|+..++...........+|...|.+++|+|+++ +++++.|+.|
T Consensus 40 ~H~~~V~~v~fSp-DG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v 117 (357)
T 4g56_B 40 CMEVQIGAVRYRR-DGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAV 117 (357)
T ss_dssp CCCSEEEEEEECS-SSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCE
T ss_pred cccCCEEEEEECC-CCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEE
Confidence 7999999999999 9999999997 788999998887654445556678999999999999986 5567889999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++||+.++.. .........+|.+.|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|++++|
T Consensus 118 ~lWd~~~~~~---~~~~~~~~~~h~~~V~~v~~spdg-~~l~sgs~dg~v~iwd~~~~~----~~~~~~~h~~~v~~v~~ 189 (357)
T 4g56_B 118 ELWEILEKES---LLVNKFAKYEHDDIVKTLSVFSDG-TQAVSGGKDFSVKVWDLSQKA----VLKSYNAHSSEVNCVAA 189 (357)
T ss_dssp EEC-----------CCCCEEECCCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEE
T ss_pred EEeeccccce---eEEEeeccCCCCCCEEEEEECCCC-CEEEEEeCCCeEEEEECCCCc----EEEEEcCCCCCEEEEEE
Confidence 9999987621 112234566899999999999999 899999999999999999876 56778899999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
+|++..++++++.||.|++||++++..... ... ..|...+++++|+|++ .+|++|+.|+.|++||++ .++.+..
T Consensus 190 s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~-~~~-~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~---~~~~~~~ 264 (357)
T 4g56_B 190 CPGKDTIFLSCGEDGRILLWDTRKPKPATR-IDF-CASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK---NPDSAQT 264 (357)
T ss_dssp CTTCSSCEEEEETTSCEEECCTTSSSCBCB-CCC-TTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS---CGGGCEE
T ss_pred ccCCCceeeeeccCCceEEEECCCCceeee-eee-ccccccccchhhhhcccceEEEeecccceeEEECC---CCcEeEE
Confidence 999877899999999999999986543222 122 4677889999999985 589999999999999998 4678889
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
+.+|...|++++|+|++..+|++|+.|++|++||+.+. +++....+...|++++|+|....++
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~-----------------~~~~~~~H~~~V~~vafsP~d~~~l 327 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFS-----------------EVFRDLSHRDFVTGVAWSPLDHSKF 327 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSC-----------------EEEEECCCSSCEEEEEECSSSTTEE
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCC-----------------cEeEECCCCCCEEEEEEeCCCCCEE
Confidence 99999999999999998789999999999999999877 4444555667899999999666788
Q ss_pred EEEeCCCeEEEEeC
Q psy4510 487 ISTANSGFNIFRTI 500 (812)
Q Consensus 487 ~~~~~~~~~~~~~~ 500 (812)
++++.|+...+|.+
T Consensus 328 ~s~s~Dg~v~iW~~ 341 (357)
T 4g56_B 328 TTVGWDHKVLHHHL 341 (357)
T ss_dssp EEEETTSCEEEEEC
T ss_pred EEEcCCCeEEEEEC
Confidence 88887775444443
No 29
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6.5e-39 Score=339.66 Aligned_cols=295 Identities=20% Similarity=0.310 Sum_probs=251.2
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
....+.+|...|++++|+|++++|++++.|+.|++||..++ .....+..|...|.+++|+|++ .+|++|+.|
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~-------~~~~~~~~~~~~v~~~~~sp~g-~~lasg~~d 127 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTT-------NKEHAVTMPCTWVMACAYAPSG-CAIACGGLD 127 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTC-------CEEEEEECSSSCCCEEEECTTS-SEEEEESTT
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCC-------CcceEEecCCCCEEEEEECCCC-CEEEEeeCC
Confidence 44567899999999999999999999999999999998874 6677888899999999999999 899999999
Q ss_pred CcEEEEeCCCCCc--ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREAGA--WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
+.+++|++..... .......+.+|...|.+++|+|++. .|++++.||+|++||+++ ..++..+ .+|...|.++
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~s~D~~v~lwd~~~---~~~~~~~-~~h~~~v~~~ 202 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDM-QILTASGDGTCALWDVES---GQLLQSF-HGHGADVLCL 202 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSS-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEE
T ss_pred CCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCC-EEEEEeCCCcEEEEeCCC---CeEEEEE-cCCCCCeEEE
Confidence 9999999875421 1113455678999999999999998 599999999999999984 4455666 7899999999
Q ss_pred EEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 373 SWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 373 ~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+|+|. +++|++|+.||.|++||++ .++.+..+.+|...|++++|+|++ .+|++++.|++|++||++....
T Consensus 203 ~~~~~~~g~~l~sgs~Dg~v~~wd~~---~~~~~~~~~~h~~~v~~v~~~p~~-~~l~s~s~D~~v~lwd~~~~~~---- 274 (354)
T 2pbi_B 203 DLAPSETGNTFVSGGCDKKAMVWDMR---SGQCVQAFETHESDVNSVRYYPSG-DAFASGSDDATCRLYDLRADRE---- 274 (354)
T ss_dssp EECCCSSCCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTTEE----
T ss_pred EEEeCCCCCEEEEEeCCCeEEEEECC---CCcEEEEecCCCCCeEEEEEeCCC-CEEEEEeCCCeEEEEECCCCcE----
Confidence 99884 6799999999999999998 577889999999999999999987 6999999999999999875410
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeE
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTI 530 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~ 530 (812)
..... .
T Consensus 275 -------------~~~~~-------------------------------------------------------~------ 280 (354)
T 2pbi_B 275 -------------VAIYS-------------------------------------------------------K------ 280 (354)
T ss_dssp -------------EEEEC-------------------------------------------------------C------
T ss_pred -------------EEEEc-------------------------------------------------------C------
Confidence 00000 0
Q ss_pred EEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc
Q psy4510 531 ISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV 610 (812)
Q Consensus 531 i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d 610 (812)
..+...+.+++|+|++++++++ +.|
T Consensus 281 -----------------------------------------------------~~~~~~~~~~~~s~~g~~l~~g--~~d 305 (354)
T 2pbi_B 281 -----------------------------------------------------ESIIFGASSVDFSLSGRLLFAG--YND 305 (354)
T ss_dssp -----------------------------------------------------TTCCSCEEEEEECTTSSEEEEE--ETT
T ss_pred -----------------------------------------------------CCcccceeEEEEeCCCCEEEEE--ECC
Confidence 0001256788999999999998 899
Q ss_pred ceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEe
Q psy4510 611 GKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 685 (812)
Q Consensus 611 g~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd 685 (812)
+.|++||+.++. ++..+.+|.+.|++++|+| ++.+|++|+.|++|+||+
T Consensus 306 ~~i~vwd~~~~~-------------------------~~~~l~~h~~~v~~l~~sp-dg~~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 306 YTINVWDVLKGS-------------------------RVSILFGHENRVSTLRVSP-DGTAFCSGSWDHTLRVWA 354 (354)
T ss_dssp SCEEEEETTTCS-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTSEEEEEC
T ss_pred CcEEEEECCCCc-------------------------eEEEEECCCCcEEEEEECC-CCCEEEEEcCCCCEEecC
Confidence 999999998776 5778899999999999999 888999999999999996
No 30
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.5e-40 Score=360.30 Aligned_cols=258 Identities=18% Similarity=0.377 Sum_probs=212.7
Q ss_pred CCCceEEEEeCCCCCC-eEEEe----------cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 175 HLTEGFAMDWSSTEPG-VLATG----------DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~-~lat~----------~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
+..+|.+++|+| ++. +||+| +.||.|+||++.++... .......|...|++++|+|++++|++++.
T Consensus 11 ~~~~v~~~~~sp-~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~--~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 87 (416)
T 2pm9_A 11 EFSRTATFAWSH-DKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSE--KPIASLQVDSKFNDLDWSHNNKIIAGALD 87 (416)
T ss_dssp EEEESCBCCBCS-SSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGC--SCSCCCCCSSCEEEEEECSSSSCEEEEES
T ss_pred hhhhcceEeeCC-CCCCEEEEEecCcccccccCCCCeEEEEEccCCCCC--cEEEEEecCCceEEEEECCCCCeEEEEcc
Confidence 456789999999 876 99999 88999999999876532 12223468999999999999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-----ceeccccccCC
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-----WQVDQKPLVGH 318 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-----~~~~~~~~~~h 318 (812)
|+.|++|++..... ...++..+.+|...|.+++|+|++..+|++|+.||.|++||+.+... .......+.+|
T Consensus 88 dg~v~vw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~ 164 (416)
T 2pm9_A 88 NGSLELYSTNEANN---AINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSS 164 (416)
T ss_dssp SSCEEEECCSSTTS---CCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCS
T ss_pred CCeEEEeecccccc---cccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCC
Confidence 99999999987210 12577888999999999999998448999999999999999988751 11112345679
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC------CCCeEEEEEcCCC-CEEEEEeCCC---
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH------TSDVNVISWNRTE-PLIVSGGDDG--- 388 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~v~~l~~~~~~-~~l~sg~~dg--- 388 (812)
...|.+++|+|++..+|++++.||.|++||++.. ..+..+ ..+ ...|.+++|+|++ .+|++++.|+
T Consensus 165 ~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~---~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~ 240 (416)
T 2pm9_A 165 VDEVISLAWNQSLAHVFASAGSSNFASIWDLKAK---KEVIHL-SYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDP 240 (416)
T ss_dssp SCCCCEEEECSSCTTEEEEESSSSCEEEEETTTT---EEEEEE-CCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSC
T ss_pred CCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCC---CcceEE-eccccccccCCceEEEEECCCCCCEEEEEECCCCCc
Confidence 9999999999995558999999999999999853 344444 333 7889999999998 5999999998
Q ss_pred cEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++. ...++..+. +|...|++++|+|.++.+|++++.|+.|++||+...
T Consensus 241 ~i~~~d~~~--~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~ 295 (416)
T 2pm9_A 241 SILIWDLRN--ANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESA 295 (416)
T ss_dssp CCCEEETTS--TTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSC
T ss_pred eEEEEeCCC--CCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCC
Confidence 999999985 235677787 899999999999944579999999999999998765
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.2e-38 Score=332.54 Aligned_cols=305 Identities=22% Similarity=0.344 Sum_probs=247.6
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
....++.+|.+.|.+++|+|+++.+|++|+.|++|++|++..... .......+.+|...|.+++|+|+++ +|++|+.|
T Consensus 8 ~l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~-~l~s~s~D 86 (319)
T 3frx_A 8 VLRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGA-YALSASWD 86 (319)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCC-EEEEEeCC
Confidence 345678999999999999998768999999999999999875432 1224567889999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
++|++||+++ ..++..+ .+|...|.+++|+|++.+|++|+.|+.|++||++ +..+..+.+|...|.++.|+|
T Consensus 87 ~~v~~wd~~~---~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~----~~~~~~~~~h~~~v~~~~~~~ 158 (319)
T 3frx_A 87 KTLRLWDVAT---GETYQRF-VGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK----GQCLATLLGHNDWVSQVRVVP 158 (319)
T ss_dssp SEEEEEETTT---TEEEEEE-ECCSSCEEEEEECTTSCEEEEEETTSCEEEEETT----SCEEEEECCCSSCEEEEEECC
T ss_pred CEEEEEECCC---CCeeEEE-ccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC----CCeEEEEeccCCcEEEEEEcc
Confidence 9999999984 4455556 7899999999999999999999999999999995 467888999999999999999
Q ss_pred CC-----CcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 422 TE-----SSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 422 ~~-----~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
.. ..+|++++.|+.|++||+...+.
T Consensus 159 ~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~-------------------------------------------------- 188 (319)
T 3frx_A 159 NEKADDDSVTIISAGNDKMVKAWNLNQFQI-------------------------------------------------- 188 (319)
T ss_dssp C------CCEEEEEETTSCEEEEETTTTEE--------------------------------------------------
T ss_pred CCCCCCCccEEEEEeCCCEEEEEECCcchh--------------------------------------------------
Confidence 63 34899999999999999865410
Q ss_pred EEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCC
Q psy4510 497 FRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKD 576 (812)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 576 (812)
T Consensus 189 -------------------------------------------------------------------------------- 188 (319)
T 3frx_A 189 -------------------------------------------------------------------------------- 188 (319)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC
Q psy4510 577 PVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 656 (812)
Q Consensus 577 ~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~ 656 (812)
...+.+|...|.+++|+|++++|+++ +.||.|++||+.+.. ++..+..+
T Consensus 189 ---~~~~~~h~~~v~~~~~sp~g~~l~s~--~~dg~i~iwd~~~~~-------------------------~~~~~~~~- 237 (319)
T 3frx_A 189 ---EADFIGHNSNINTLTASPDGTLIASA--GKDGEIMLWNLAAKK-------------------------AMYTLSAQ- 237 (319)
T ss_dssp ---EEEECCCCSCEEEEEECTTSSEEEEE--ETTCEEEEEETTTTE-------------------------EEEEEECC-
T ss_pred ---heeecCCCCcEEEEEEcCCCCEEEEE--eCCCeEEEEECCCCc-------------------------EEEEecCC-
Confidence 01233456688999999999999998 899999999999876 56666654
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCc
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 736 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~ 736 (812)
..|.+++|+| ++.+|++++.+ .+++|++..+.... .+... .......|..
T Consensus 238 ~~v~~~~~sp-~~~~la~~~~~-~i~v~~~~~~~~~~-----------------------~~~~~-----~~~~~~~~~~ 287 (319)
T 3frx_A 238 DEVFSLAFSP-NRYWLAAATAT-GIKVFSLDPQYLVD-----------------------DLRPE-----FAGYSKAAEP 287 (319)
T ss_dssp SCEEEEEECS-SSSEEEEEETT-EEEEEEETTEEEEE-----------------------EECCC-----CTTCCGGGCC
T ss_pred CcEEEEEEcC-CCCEEEEEcCC-CcEEEEeCcCeeee-----------------------ccCcc-----ccccccCcCc
Confidence 6899999999 78788887754 48899875432211 11111 1223455677
Q ss_pred ceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 737 SVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 737 ~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
.|.+++|||||+ +|++|+.||+|+|||+..+
T Consensus 288 ~v~~~~~spdg~-~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 288 HAVSLAWSADGQ-TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEEEEEC
T ss_pred ceeEEEECCCCC-EEEEeecCceEEEEEEeec
Confidence 899999999999 8999999999999999764
No 32
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.9e-39 Score=354.18 Aligned_cols=348 Identities=18% Similarity=0.243 Sum_probs=274.3
Q ss_pred CCCCceEEEEeCCCCCC-eEEEecCCCcEEEEcc----CCCC------cccccccccCC------CCCCeeeeeEcCCCC
Q psy4510 174 GHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTP----REAG------AWQVDQKPLGG------HTNSAEDLQWSDLKT 236 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~----~~~~------~~~~~~~~l~~------h~~~V~~l~~s~~~~ 236 (812)
.|.+.|++++|+| +++ +||+|+.||.|+||++ .++. ........+.+ |...|++++|+|+++
T Consensus 43 ~~~~~v~~~~~s~-~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 121 (425)
T 1r5m_A 43 VKLDNIVSSTWNP-LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGN 121 (425)
T ss_dssp EECSCCSEEEECS-SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSS
T ss_pred eccCceEEEEECC-CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCC
Confidence 5669999999999 999 9999999999999999 7766 22222333333 688999999999999
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
+|++++.++.|++|+.. ...+..+.+|...|.+++|+|++ .+|++++.||.|++||+.++. ....+.
T Consensus 122 ~l~~~~~dg~i~i~~~~--------~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~----~~~~~~ 188 (425)
T 1r5m_A 122 SIVTGVENGELRLWNKT--------GALLNVLNFHRAPIVSVKWNKDG-THIISMDVENVTILWNVISGT----VMQHFE 188 (425)
T ss_dssp EEEEEETTSCEEEEETT--------SCEEEEECCCCSCEEEEEECTTS-SEEEEEETTCCEEEEETTTTE----EEEEEC
T ss_pred EEEEEeCCCeEEEEeCC--------CCeeeeccCCCccEEEEEECCCC-CEEEEEecCCeEEEEECCCCc----EEEEee
Confidence 99999999999999933 27788899999999999999998 799999999999999998876 344555
Q ss_pred CCCCC---------------EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE
Q psy4510 317 GHTNS---------------VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI 381 (812)
Q Consensus 317 ~h~~~---------------v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l 381 (812)
.+... +.+++|+|++ .+++++.+|.|++||++.. ..+..+ ..|...|.+++|+|++++|
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~g~i~~~d~~~~---~~~~~~-~~~~~~i~~~~~~~~~~~l 262 (425)
T 1r5m_A 189 LKETGGSSINAENHSGDGSLGVDVEWVDDD--KFVIPGPKGAIFVYQITEK---TPTGKL-IGHHGPISVLEFNDTNKLL 262 (425)
T ss_dssp CC---------------CCCBSCCEEEETT--EEEEECGGGCEEEEETTCS---SCSEEE-CCCSSCEEEEEEETTTTEE
T ss_pred ccccCccceeeccccCCcceeeEEEEcCCC--EEEEEcCCCeEEEEEcCCC---ceeeee-ccCCCceEEEEECCCCCEE
Confidence 55555 9999999986 4899999999999999853 344455 6889999999999999999
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
++++.||.|++||++ ....+..+..|...|.+++|+|++ +|++++.|+.|++||+.....
T Consensus 263 ~~~~~d~~i~i~d~~---~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~d~~i~i~d~~~~~~--------------- 322 (425)
T 1r5m_A 263 LSASDDGTLRIWHGG---NGNSQNCFYGHSQSIVSASWVGDD--KVISCSMDGSVRLWSLKQNTL--------------- 322 (425)
T ss_dssp EEEETTSCEEEECSS---SBSCSEEECCCSSCEEEEEEETTT--EEEEEETTSEEEEEETTTTEE---------------
T ss_pred EEEcCCCEEEEEECC---CCccceEecCCCccEEEEEECCCC--EEEEEeCCCcEEEEECCCCcE---------------
Confidence 999999999999998 466788888999999999999986 899999999999999875510
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
.
T Consensus 323 --~----------------------------------------------------------------------------- 323 (425)
T 1r5m_A 323 --L----------------------------------------------------------------------------- 323 (425)
T ss_dssp --E-----------------------------------------------------------------------------
T ss_pred --e-----------------------------------------------------------------------------
Confidence 0
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
..+..|...|.+++|+|++++++++ +.||.|++|++.+.
T Consensus 324 ---------------------------------------~~~~~~~~~i~~~~~s~~~~~l~~~--~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 324 ---------------------------------------ALSIVDGVPIFAGRISQDGQKYAVA--FMDGQVNVYDLKKL 362 (425)
T ss_dssp ---------------------------------------EEEECTTCCEEEEEECTTSSEEEEE--ETTSCEEEEECHHH
T ss_pred ---------------------------------------EecccCCccEEEEEEcCCCCEEEEE--ECCCeEEEEECCCC
Confidence 0112233478888999999999998 78999999999876
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCC--ceEEEEeCCCCCCeEEecCCCceEEEEecC
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT--EGFAMDWSSTEPGVLATGDCKRNIHIWTPR 687 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~--~V~~l~~sp~~~~~las~s~Dg~v~iWd~~ 687 (812)
........ .............++..+.+|.. .|++++|+| ++++|++++.||.|++|+++
T Consensus 363 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 363 NSKSRSLY-----GNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNC-AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp HC-------------------CEECCEEEEECCTTCCCCEEEEEECT-TSSEEEEEESSSCCEEEECC
T ss_pred ccceeeee-----cccccccCcccchhhhhhcCcccCCceEEEEccC-CCceEEEEecCceEEEEeec
Confidence 42110000 00000011112336788999977 999999999 78899999999999999985
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.3e-39 Score=352.36 Aligned_cols=367 Identities=14% Similarity=0.162 Sum_probs=274.3
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeC----CCCCCCCCCCCCceEEcC----
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNK----KRGKGPGIPTPPLFSFSG---- 270 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~----~~~~~~~~~~~~~~~~~~---- 270 (812)
.+.+|++.... .......|..+|++++|+|+++ +|++++.|+.|++|++ .++.... .......+..
T Consensus 26 ~~~~~~~~~~~----~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 100 (425)
T 1r5m_A 26 IDSSDDLDGFV----KILKEIVKLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYW-KLTIIAELRHPFAL 100 (425)
T ss_dssp --------CCC----EECEEEEECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CE-EEEEEEEEECCCCC
T ss_pred ccccccchhhh----hheeeeeccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccc-cccccccccccccc
Confidence 34567665433 2233345669999999999999 9999999999999999 7651000 0002333333
Q ss_pred ------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeE
Q psy4510 271 ------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 271 ------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
|.+.|.+++|+|++ .+|++|+.||.|++|+ .++. ....+.+|...|.+++|+|+++ +|++++.||.|
T Consensus 101 ~~~~~~~~~~v~~~~~s~~~-~~l~~~~~dg~i~i~~-~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i 173 (425)
T 1r5m_A 101 SASSGKTTNQVTCLAWSHDG-NSIVTGVENGELRLWN-KTGA----LLNVLNFHRAPIVSVKWNKDGT-HIISMDVENVT 173 (425)
T ss_dssp C------CBCEEEEEECTTS-SEEEEEETTSCEEEEE-TTSC----EEEEECCCCSCEEEEEECTTSS-EEEEEETTCCE
T ss_pred cccccCCCCceEEEEEcCCC-CEEEEEeCCCeEEEEe-CCCC----eeeeccCCCccEEEEEECCCCC-EEEEEecCCeE
Confidence 78899999999998 8999999999999999 3443 4667788999999999999998 69999999999
Q ss_pred EEEECCCCCcccceeecCCcCCCC---------------eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSD---------------VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~---------------v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
++||+++. ..+..+ ..+... +.+++|++++ .+++++.+|.|++||++ ....+..+..
T Consensus 174 ~iwd~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~i~~~d~~---~~~~~~~~~~ 245 (425)
T 1r5m_A 174 ILWNVISG---TVMQHF-ELKETGGSSINAENHSGDGSLGVDVEWVDDD-KFVIPGPKGAIFVYQIT---EKTPTGKLIG 245 (425)
T ss_dssp EEEETTTT---EEEEEE-CCC---------------CCCBSCCEEEETT-EEEEECGGGCEEEEETT---CSSCSEEECC
T ss_pred EEEECCCC---cEEEEe-eccccCccceeeccccCCcceeeEEEEcCCC-EEEEEcCCCeEEEEEcC---CCceeeeecc
Confidence 99999843 334444 444444 8999999875 68899999999999998 4677888889
Q ss_pred CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 410 HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 410 h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
|...|.+++|+|++ .+|++++.|+.|++||+...+.
T Consensus 246 ~~~~i~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~~------------------------------------------- 281 (425)
T 1r5m_A 246 HHGPISVLEFNDTN-KLLLSASDDGTLRIWHGGNGNS------------------------------------------- 281 (425)
T ss_dssp CSSCEEEEEEETTT-TEEEEEETTSCEEEECSSSBSC-------------------------------------------
T ss_pred CCCceEEEEECCCC-CEEEEEcCCCEEEEEECCCCcc-------------------------------------------
Confidence 99999999999987 5999999999999999875421
Q ss_pred eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCC
Q psy4510 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
T Consensus 282 -------------------------------------------------------------------------------- 281 (425)
T 1r5m_A 282 -------------------------------------------------------------------------------- 281 (425)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCe
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPL 649 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 649 (812)
...+..|...|.+++|+|++ .++++ +.||.|++||+.++. ++
T Consensus 282 ----------~~~~~~~~~~i~~~~~~~~~-~l~~~--~~d~~i~i~d~~~~~-------------------------~~ 323 (425)
T 1r5m_A 282 ----------QNCFYGHSQSIVSASWVGDD-KVISC--SMDGSVRLWSLKQNT-------------------------LL 323 (425)
T ss_dssp ----------SEEECCCSSCEEEEEEETTT-EEEEE--ETTSEEEEEETTTTE-------------------------EE
T ss_pred ----------ceEecCCCccEEEEEECCCC-EEEEE--eCCCcEEEEECCCCc-------------------------Ee
Confidence 01122344578889999998 77777 789999999998876 67
Q ss_pred eeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccc
Q psy4510 650 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQK 729 (812)
Q Consensus 650 ~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~ 729 (812)
..+.+|...|.+++|+| ++.+|++++.||.|++|++.++....... .+..++.+... ..+ ++.
T Consensus 324 ~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~i~~~~~~~~~~~~~---------~~~~~~~~~~~---~~~----~~~ 386 (425)
T 1r5m_A 324 ALSIVDGVPIFAGRISQ-DGQKYAVAFMDGQVNVYDLKKLNSKSRSL---------YGNRDGILNPL---PIP----LYA 386 (425)
T ss_dssp EEEECTTCCEEEEEECT-TSSEEEEEETTSCEEEEECHHHHC-----------------------CE---ECC----EEE
T ss_pred EecccCCccEEEEEEcC-CCCEEEEEECCCeEEEEECCCCccceeee---------ecccccccCcc---cch----hhh
Confidence 78889999999999999 78899999999999999997654221111 12223322211 111 456
Q ss_pred cccCCCc--ceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 730 PLVGHTN--SVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 730 ~~~gH~~--~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
.+.+|.. .|++++|+|+++ +|++++.||.|++|+++
T Consensus 387 ~~~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 387 SYQSSQDNDYIFDLSWNCAGN-KISVAYSLQEGSVVAIP 424 (425)
T ss_dssp EECCTTCCCCEEEEEECTTSS-EEEEEESSSCCEEEECC
T ss_pred hhcCcccCCceEEEEccCCCc-eEEEEecCceEEEEeec
Confidence 7888876 999999999999 89999999999999986
No 34
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.6e-38 Score=335.03 Aligned_cols=294 Identities=17% Similarity=0.283 Sum_probs=247.9
Q ss_pred CCCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 164 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 164 ~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
+..+....+.||.+.|++++|+| ++++||||+.||+|+|||+.++. ....+..|...|.+++|+|++++|++++.
T Consensus 43 ~~~~~~~~l~gH~~~v~~~~~s~-d~~~l~s~s~Dg~v~iWd~~~~~----~~~~~~~~~~~v~~~~~s~~~~~l~s~~~ 117 (340)
T 1got_B 43 IQMRTRRTLRGHLAKIYAMHWGT-DSRLLLSASQDGKLIIWDSYTTN----KVHAIPLRSSWVMTCAYAPSGNYVACGGL 117 (340)
T ss_dssp CCCCEEEEECCCSSCEEEEEECT-TSSEEEEEETTTEEEEEETTTCC----EEEEEECSSSCEEEEEECTTSSEEEEEET
T ss_pred ccchhheeecCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCC----cceEeecCCccEEEEEECCCCCEEEEEeC
Confidence 44556677889999999999999 99999999999999999998876 56677889999999999999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
|+.+++|++.++.. .......+.+|.+.|.++.|++++ .+++|+.|++|++||+.++. ....+.+|.+.|.
T Consensus 118 d~~v~iw~~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~--~l~s~s~d~~i~~wd~~~~~----~~~~~~~h~~~v~ 188 (340)
T 1got_B 118 DNICSIYNLKTREG---NVRVSRELAGHTGYLSCCRFLDDN--QIVTSSGDTTCALWDIETGQ----QTTTFTGHTGDVM 188 (340)
T ss_dssp TCEEEEEETTTCSB---SCEEEEEEECCSSCEEEEEEEETT--EEEEEETTSCEEEEETTTTE----EEEEECCCSSCEE
T ss_pred CCeEEEEECccCCC---cceeEEEecCCCccEEEEEECCCC--cEEEEECCCcEEEEECCCCc----EEEEEcCCCCceE
Confidence 99999999987410 123456788999999999999985 69999999999999999876 5677889999999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+++|+|++. +|++|+.||.|++||+++ ..++..+ .+|...|++++|+|++++|++|+.||.|++||++. .+.
T Consensus 189 ~~~~~~~~~-~l~sg~~d~~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~---~~~ 260 (340)
T 1got_B 189 SLSLAPDTR-LFVSGACDASAKLWDVRE---GMCRQTF-TGHESDINAICFFPNGNAFATGSDDATCRLFDLRA---DQE 260 (340)
T ss_dssp EEEECTTSS-EEEEEETTSCEEEEETTT---CSEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEE
T ss_pred EEEECCCCC-EEEEEeCCCcEEEEECCC---CeeEEEE-cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCC---CcE
Confidence 999999998 799999999999999984 4455666 78999999999999999999999999999999984 455
Q ss_pred eEEcc--cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 404 VATFK--HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 404 ~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+..+. .+...|++++|+|++ .+|++|+.|+.|++||+.... .+.....+...|.+++|+|+
T Consensus 261 ~~~~~~~~~~~~v~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~----------------~~~~~~~h~~~v~~~~~s~d 323 (340)
T 1got_B 261 LMTYSHDNIICGITSVSFSKSG-RLLLAGYDDFNCNVWDALKAD----------------RAGVLAGHDNRVSCLGVTDD 323 (340)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC----------------EEEEEECCSSCEEEEEECTT
T ss_pred EEEEccCCcccceEEEEECCCC-CEEEEECCCCeEEEEEcccCc----------------EeeEeecCCCcEEEEEEcCC
Confidence 55554 234579999999997 699999999999999998763 23334455668999999999
Q ss_pred CCCEEEEEeCCC-eEEE
Q psy4510 482 LPGTIISTANSG-FNIF 497 (812)
Q Consensus 482 ~~~~~~~~~~~~-~~~~ 497 (812)
+.. +++++.|+ +.+|
T Consensus 324 g~~-l~s~s~D~~i~iW 339 (340)
T 1got_B 324 GMA-VATGSWDSFLKIW 339 (340)
T ss_dssp SSC-EEEEETTSCEEEE
T ss_pred CCE-EEEEcCCccEEec
Confidence 854 55555554 5555
No 35
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-38 Score=331.97 Aligned_cols=254 Identities=19% Similarity=0.323 Sum_probs=217.2
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-ccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....+.||.+.|++++|+|.++++||||+.|++|++|++..... .......+.+|...|.+++|+|++++|++++.|++
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~ 88 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKT 88 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCE
Confidence 34456799999999999994558999999999999999875432 22346678999999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.|++|++||+... ....+.+|...|.+++
T Consensus 89 v~~wd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~D~~i~vwd~~~~-----~~~~~~~h~~~v~~~~ 155 (319)
T 3frx_A 89 LRLWDVATG-------ETYQRFVGHKSDVMSVDIDKKA-SMIISGSRDKTIKVWTIKGQ-----CLATLLGHNDWVSQVR 155 (319)
T ss_dssp EEEEETTTT-------EEEEEEECCSSCEEEEEECTTS-CEEEEEETTSCEEEEETTSC-----EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------CeeEEEccCCCcEEEEEEcCCC-CEEEEEeCCCeEEEEECCCC-----eEEEEeccCCcEEEEE
Confidence 999999885 7788999999999999999998 89999999999999999743 4567789999999999
Q ss_pred EcCCCC-----eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 327 WSPGEK-----RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 327 ~~p~~~-----~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
|+|.+. .+|++++.|+.|++||++. ......+ .+|...|++++|+|++++|++|+.||.|++||++ ..
T Consensus 156 ~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~---~~~~~~~-~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~---~~ 228 (319)
T 3frx_A 156 VVPNEKADDDSVTIISAGNDKMVKAWNLNQ---FQIEADF-IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLA---AK 228 (319)
T ss_dssp ECCC------CCEEEEEETTSCEEEEETTT---TEEEEEE-CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETT---TT
T ss_pred EccCCCCCCCccEEEEEeCCCEEEEEECCc---chhheee-cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC---CC
Confidence 999643 2699999999999999984 3344555 7899999999999999999999999999999998 45
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+..+.. ...|.+++|+|++ .+|++++.+ .+++|++...
T Consensus 229 ~~~~~~~~-~~~v~~~~~sp~~-~~la~~~~~-~i~v~~~~~~ 268 (319)
T 3frx_A 229 KAMYTLSA-QDEVFSLAFSPNR-YWLAAATAT-GIKVFSLDPQ 268 (319)
T ss_dssp EEEEEEEC-CSCEEEEEECSSS-SEEEEEETT-EEEEEEETTE
T ss_pred cEEEEecC-CCcEEEEEEcCCC-CEEEEEcCC-CcEEEEeCcC
Confidence 66777764 4689999999997 577777754 5999998654
No 36
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-38 Score=332.33 Aligned_cols=311 Identities=17% Similarity=0.292 Sum_probs=230.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc-c-CCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-V-GHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~-~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+++.++.+|.+.|++++|+|+ +|++|+.|++|++|++..+... ....+ . +|...|.+++|+|+++ +|++|+.
T Consensus 5 ~~~~~~~~h~~~v~~~~~s~~---~las~~~D~~i~lw~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~-~las~s~ 78 (330)
T 2hes_X 5 NLIKSLKLYKEKIWSFDFSQG---ILATGSTDRKIKLVSVKYDDFT--LIDVLDETAHKKAIRSVAWRPHTS-LLAAGSF 78 (330)
T ss_dssp EEEEEEECCSSCEEEEEEETT---EEEEEESSSCEEEEECSSSCCE--EEEEECTTCCCSCEEEEEECTTSS-EEEEEET
T ss_pred ccceeeccCCCceeeeccCCC---EEEEEcCCCEEEEEEecCCCeE--EEEEEecCCccCCEEEEEECCCCC-EEEEEeC
Confidence 567789999999999999985 9999999999999999875321 12233 3 4999999999999998 7999999
Q ss_pred CCeEEEEECCCCC----cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-CCCCceEEcccCCCCEE
Q psy4510 341 DLSIRIWDTRVIN----TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-KKGSSVATFKHHTAPVT 415 (812)
Q Consensus 341 dg~i~iwd~~~~~----~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-~~~~~~~~~~~h~~~v~ 415 (812)
|++|++||++... ...++..+ .+|...|++++|+|++++|++|+.|+.|++||++.. .....+..+.+|...|.
T Consensus 79 D~~v~iw~~~~~~~~~~~~~~~~~~-~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~ 157 (330)
T 2hes_X 79 DSTVSIWAKEESADRTFEMDLLAII-EGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVK 157 (330)
T ss_dssp TSCEEEEEC-------CCCEEEEEE-C----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEE
T ss_pred CCcEEEEEcccCcCccccceeEEEE-cCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceE
Confidence 9999999986421 12234444 789999999999999999999999999999999532 12346778899999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
+++|+|++ .+|++++.|++|++||+..... .
T Consensus 158 ~v~~~p~~-~~l~s~s~D~~i~iW~~~~~~~---------------~--------------------------------- 188 (330)
T 2hes_X 158 HVIWHPSE-ALLASSSYDDTVRIWKDYDDDW---------------E--------------------------------- 188 (330)
T ss_dssp EEEECSSS-SEEEEEETTSCEEEEEEETTEE---------------E---------------------------------
T ss_pred EEEECCCC-CEEEEEcCCCeEEEEECCCCCe---------------e---------------------------------
Confidence 99999986 6999999999999999753300 0
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
T Consensus 189 -------------------------------------------------------------------------------- 188 (330)
T 2hes_X 189 -------------------------------------------------------------------------------- 188 (330)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCccceEEecccceEEEEEEecc--CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQY--GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS 653 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~--g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 653 (812)
....+.+|.+.|.+++|+|+ +.+++++ +.|++|++|++........ ....+...+.
T Consensus 189 ---~~~~~~~h~~~v~~~~~~~~~~~~~l~s~--s~D~~v~iw~~~~~~~~~~-----------------~~~~~~~~~~ 246 (330)
T 2hes_X 189 ---CVAVLNGHEGTVWSSDFDKTEGVFRLCSG--SDDSTVRVWKYMGDDEDDQ-----------------QEWVCEAILP 246 (330)
T ss_dssp ---EEEEECCCSSCEEEEEECCSSSSCEEEEE--ETTSCEEEEEEEEECTTSC-----------------EEEEEEEECC
T ss_pred ---EEEEccCCCCcEEEEEecCCCCeeEEEEE--eCCCeEEEEEecCCCcccc-----------------ceeEEeeecc
Confidence 01124456667888888888 5678887 8999999999976531100 0001344455
Q ss_pred C-CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccccc
Q psy4510 654 G-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 732 (812)
Q Consensus 654 g-h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~ 732 (812)
+ |...|++++|++ ++ +|++++.||+|+||+..++.. +.....+.
T Consensus 247 ~~h~~~v~~v~~s~-~~-~l~s~~~dg~v~iw~~~~~~~---------------------------------~~~~~~~~ 291 (330)
T 2hes_X 247 DVHKRQVYNVAWGF-NG-LIASVGADGVLAVYEEVDGEW---------------------------------KVFAKRAL 291 (330)
T ss_dssp SCCSSCEEEEEECT-TS-CEEEEETTSCEEEEEEETTEE---------------------------------EEEEEESC
T ss_pred cccccceEEEEEcC-CC-EEEEEeCCCEEEEEEcCCCce---------------------------------EEEecccc
Confidence 5 899999999997 54 788888888888888632210 00112345
Q ss_pred CCCc-ceeEeEEec--CCceeEEeeccCCceEEeeecC
Q psy4510 733 GHTN-SVEDLQWSP--GEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 733 gH~~-~V~~l~fs~--dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+|.. .|++++|+| +++ +|||||.||+|+||+++.
T Consensus 292 ~h~~~~v~~v~~~~~~~~~-~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 292 CHGVYEINVVKWLELNGKT-ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp TTTTSCEEEEEEC-----C-CEEEEETTSEEEEEEC--
T ss_pred ccccceEEEEEEecCCCce-EEEEecCCCcEEEEEecc
Confidence 7776 899999999 677 899999999999999865
No 37
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.9e-38 Score=335.19 Aligned_cols=311 Identities=20% Similarity=0.375 Sum_probs=248.2
Q ss_pred CccCcCCCCC-ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLT-EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~-~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.+..+.+|.+ .|++++|+| ++++||||+.|++|+||++.++... .......+|...|++++|+|++++|++++.|+.
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp-~g~~las~~~D~~i~iw~~~~~~~~-~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~ 84 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNP-AGTLLASCGGDRRIRIWGTEGDSWI-CKSVLSEGHQRTVRKVAWSPCGNYLASASFDAT 84 (345)
T ss_dssp EEEEECCSTTSCEEEEEECT-TSSCEEEEETTSCEEEEEEETTEEE-EEEEECSSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EeeeecCCCCCcEEEEEECC-CCCEEEEEcCCCeEEEEEcCCCcce-eeeeeccccCCcEEEEEECCCCCEEEEEECCCc
Confidence 4556668987 999999999 9999999999999999998775421 112234789999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
+++|++..+ ...++..+.+|...|.+++|+|++ .+|++|+.|++|++||+...... .....+.+|...|.+++
T Consensus 85 v~iw~~~~~-----~~~~~~~~~~h~~~v~~v~~sp~~-~~l~s~s~D~~v~iwd~~~~~~~-~~~~~~~~h~~~v~~~~ 157 (345)
T 3fm0_A 85 TCIWKKNQD-----DFECVTTLEGHENEVKSVAWAPSG-NLLATCSRDKSVWVWEVDEEDEY-ECVSVLNSHTQDVKHVV 157 (345)
T ss_dssp EEEEEECCC------EEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEEECTTSCE-EEEEEECCCCSCEEEEE
T ss_pred EEEEEccCC-----CeEEEEEccCCCCCceEEEEeCCC-CEEEEEECCCeEEEEECCCCCCe-EEEEEecCcCCCeEEEE
Confidence 999998774 234678899999999999999998 89999999999999999876532 13456788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC-----
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----- 401 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----- 401 (812)
|+|++. +|++|+.|+.|++||++... ..+...+ .+|...|++++|+|++++|++|+.||.|+|||.+.....
T Consensus 158 ~~p~~~-~l~s~s~d~~i~~w~~~~~~-~~~~~~~-~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~ 234 (345)
T 3fm0_A 158 WHPSQE-LLASASYDDTVKLYREEEDD-WVCCATL-EGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLPGNEQGVAC 234 (345)
T ss_dssp ECSSSS-CEEEEETTSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECTTCTTCCCC
T ss_pred ECCCCC-EEEEEeCCCcEEEEEecCCC-EEEEEEe-cCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccCCCCcccee
Confidence 999998 69999999999999987432 2234455 789999999999999999999999999999997532111
Q ss_pred -------CceEEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe--e-cCC
Q psy4510 402 -------SSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI--H-LGQ 470 (812)
Q Consensus 402 -------~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~ 470 (812)
..+..+.+ |...|.+++|+|++ ..|++++.|+.|++|+....... ..+...... + .+.
T Consensus 235 ~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~-~~l~s~~~d~~i~vw~~~~~~~~----------~~~~~~~~~~~~~~h~ 303 (345)
T 3fm0_A 235 SGSDPSWKCICTLSGFHSRTIYDIAWCQLT-GALATACGDDAIRVFQEDPNSDP----------QQPTFSLTAHLHQAHS 303 (345)
T ss_dssp C---CEEEEEEEECSSCSSCEEEEEECTTT-CCEEEEETTSCEEEEEECTTSCT----------TSCCEEEEEEETTSSS
T ss_pred eccCCccceeEEecCCCCCcEEEEEEecCC-CEEEEEeCCCeEEEEEeCCCCCc----------ceeeEEEEeeeccccc
Confidence 12334444 88999999999987 58999999999999998765321 011111111 1 344
Q ss_pred CceeEEEEcCCCCCEEEEEeCCCe-EEEEeCC
Q psy4510 471 KEIKELHWHPQLPGTIISTANSGF-NIFRTIS 501 (812)
Q Consensus 471 ~~v~~~~~~p~~~~~~~~~~~~~~-~~~~~~~ 501 (812)
..|.+++|+|+++.++++++.|+. .+|+...
T Consensus 304 ~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~ 335 (345)
T 3fm0_A 304 QDVNCVAWNPKEPGLLASCSDDGEVAFWKYQR 335 (345)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEEECC
T ss_pred CcEeEeEEeCCCceEEEEcCCCCcEEEEEecC
Confidence 589999999998888988888775 5555443
No 38
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.6e-39 Score=335.11 Aligned_cols=265 Identities=24% Similarity=0.334 Sum_probs=208.9
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-C-CCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-G-GHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-~-~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+..+.+|.++|++++|+| + +||||+.|++|+||++..+... ....+ . +|...|++++|+|++++|++++.|+
T Consensus 6 ~~~~~~~h~~~v~~~~~s~-~--~las~~~D~~i~lw~~~~~~~~--~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~ 80 (330)
T 2hes_X 6 LIKSLKLYKEKIWSFDFSQ-G--ILATGSTDRKIKLVSVKYDDFT--LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDS 80 (330)
T ss_dssp EEEEEECCSSCEEEEEEET-T--EEEEEESSSCEEEEECSSSCCE--EEEEECTTCCCSCEEEEEECTTSSEEEEEETTS
T ss_pred cceeeccCCCceeeeccCC-C--EEEEEcCCCEEEEEEecCCCeE--EEEEEecCCccCCEEEEEECCCCCEEEEEeCCC
Confidence 4556679999999999999 6 9999999999999999875321 22333 3 4999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.|++|++...........++..+.+|.+.|.+++|+|++ .+|++|+.|++|++||+............+.+|...|.++
T Consensus 81 ~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g-~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v 159 (330)
T 2hes_X 81 TVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDG-YYLATCSRDKSVWIWETDESGEEYECISVLQEHSQDVKHV 159 (330)
T ss_dssp CEEEEEC-------CCCEEEEEEC----CEEEEEECTTS-CEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSSCEEEE
T ss_pred cEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCC-CEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCCceEEE
Confidence 999999864311111234567889999999999999998 8999999999999999964432122356678899999999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCC--
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKG-- 401 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~-- 401 (812)
+|+|++. +|++|+.|++|++||++... ..++..+ .+|...|.+++|+|+ +.+|++|+.|++|++||++.....
T Consensus 160 ~~~p~~~-~l~s~s~D~~i~iW~~~~~~-~~~~~~~-~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEA-LLASSSYDDTVRIWKDYDDD-WECVAVL-NGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSS-EEEEEETTSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSC
T ss_pred EECCCCC-EEEEEcCCCeEEEEECCCCC-eeEEEEc-cCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCcccc
Confidence 9999998 69999999999999987431 2355555 789999999999998 669999999999999999742111
Q ss_pred ---CceEEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 402 ---SSVATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 402 ---~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
.....+.. |...|.+++|++.+ +|++++.||.|++||...
T Consensus 237 ~~~~~~~~~~~~h~~~v~~v~~s~~~--~l~s~~~dg~v~iw~~~~ 280 (330)
T 2hes_X 237 QEWVCEAILPDVHKRQVYNVAWGFNG--LIASVGADGVLAVYEEVD 280 (330)
T ss_dssp EEEEEEEECCSCCSSCEEEEEECTTS--CEEEEETTSCEEEEEEET
T ss_pred ceeEEeeecccccccceEEEEEcCCC--EEEEEeCCCEEEEEEcCC
Confidence 23445554 89999999999753 799999999999999753
No 39
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.8e-38 Score=333.79 Aligned_cols=216 Identities=19% Similarity=0.311 Sum_probs=183.8
Q ss_pred cccccCCCCCCeeeeeE-----cC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEE
Q psy4510 215 DQKPLGGHTNSAEDLQW-----SD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL 288 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~-----s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l 288 (812)
....+.+|...|++++| ++ ++++|++|+.|++|++|++...........+...+.+|...|.+++|+|++ .+|
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~-~~l 91 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQEN-CFA 91 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSST-TEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCC-CEE
Confidence 45678899999999999 76 899999999999999999976421111124567789999999999999998 899
Q ss_pred EEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 289 ATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
++|+.|++|++||+.++. ....+.+|...|.+++|+|+++ +|++++.|+.|++||++.. ..........|...
T Consensus 92 ~s~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~v~~sp~~~-~l~s~~~d~~i~~wd~~~~--~~~~~~~~~~~~~~ 164 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTGT----TYKRFVGHQSEVYSVAFSPDNR-QILSAGAEREIKLWNILGE--CKFSSAEKENHSDW 164 (343)
T ss_dssp EEEETTSEEEEEETTSSC----EEEEEECCCSCEEEEEECSSTT-EEEEEETTSCEEEEESSSC--EEEECCTTTSCSSC
T ss_pred EEEcCCCcEEEEECCCCc----EEEEEcCCCCcEEEEEECCCCC-EEEEEcCCCEEEEEeccCC--ceeeeecccCCCce
Confidence 999999999999999887 5677889999999999999998 6999999999999999731 11111112478899
Q ss_pred eEEEEEcCCC----------CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 369 VNVISWNRTE----------PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 369 v~~l~~~~~~----------~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
|.+++|+|++ .+|++|+.||.|++||. .......+.+|...|.+++|+|++ .+|++|+.|+.|++
T Consensus 165 v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~----~~~~~~~~~~h~~~v~~~~~s~~g-~~l~sgs~dg~v~i 239 (343)
T 2xzm_R 165 VSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT----NFQIRYTFKAHESNVNHLSISPNG-KYIATGGKDKKLLI 239 (343)
T ss_dssp EEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET----TTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTCEEEE
T ss_pred eeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC----CCceeEEEcCccccceEEEECCCC-CEEEEEcCCCeEEE
Confidence 9999999987 69999999999999995 356677889999999999999997 69999999999999
Q ss_pred EEcCC
Q psy4510 439 WDLAV 443 (812)
Q Consensus 439 wd~~~ 443 (812)
||+..
T Consensus 240 wd~~~ 244 (343)
T 2xzm_R 240 WDILN 244 (343)
T ss_dssp EESSC
T ss_pred EECCC
Confidence 99853
No 40
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9.1e-38 Score=330.85 Aligned_cols=297 Identities=16% Similarity=0.252 Sum_probs=247.6
Q ss_pred CCCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 165 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 165 ~~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
..+....+.||.+.|++++|+| ++++||||+.||+|+|||..+.. ....+..|...|.+++|+|++++|++++.|
T Consensus 53 ~~~~~~~l~gH~~~V~~~~~s~-d~~~l~s~s~Dg~v~vWd~~~~~----~~~~~~~~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 53 VMKTRRTLKGHGNKVLCMDWCK-DKRRIVSSSQDGKVIVWDSFTTN----KEHAVTMPCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CCCEEEEEECCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCC----EEEEEECSSSCCCEEEECTTSSEEEEESTT
T ss_pred ccEEEEEecCCCCeEEEEEECC-CCCEEEEEeCCCeEEEEECCCCC----cceEEecCCCCEEEEEECCCCCEEEEeeCC
Confidence 3456677889999999999999 99999999999999999988776 455677899999999999999999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
+.+++|++....... .......+.+|...|.+++|+|++ ..|++|+.|++|++||+.++. ....+.+|...|.+
T Consensus 128 ~~i~v~~~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~-~~l~t~s~D~~v~lwd~~~~~----~~~~~~~h~~~v~~ 201 (354)
T 2pbi_B 128 NKCSVYPLTFDKNEN-MAAKKKSVAMHTNYLSACSFTNSD-MQILTASGDGTCALWDVESGQ----LLQSFHGHGADVLC 201 (354)
T ss_dssp SEEEEEECCCCTTCC-SGGGCEEEEECSSCEEEEEECSSS-SEEEEEETTSEEEEEETTTCC----EEEEEECCSSCEEE
T ss_pred CCEEEEEEecccccc-ccccceeeeccCCcEEEEEEeCCC-CEEEEEeCCCcEEEEeCCCCe----EEEEEcCCCCCeEE
Confidence 999999987642111 124556788999999999999998 799999999999999999887 56778899999999
Q ss_pred EEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 325 LQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 325 ~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
++|+|+. ..+|++|+.||.|++||+++ ..++..+ ..|...|++++|+|++++|++|+.|++|++||++. ...
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~---~~~~~~~-~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~---~~~ 274 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRS---GQCVQAF-ETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRA---DRE 274 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT---TEE
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCC---CcEEEEe-cCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCC---CcE
Confidence 9998853 23799999999999999984 4456666 78999999999999999999999999999999984 445
Q ss_pred eEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 404 VATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 404 ~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
+..+.. +...+.+++|+|++ .+|++|+.|+.|++||+.... .+.....+...|.+++|+|+
T Consensus 275 ~~~~~~~~~~~~~~~~~~s~~g-~~l~~g~~d~~i~vwd~~~~~----------------~~~~l~~h~~~v~~l~~spd 337 (354)
T 2pbi_B 275 VAIYSKESIIFGASSVDFSLSG-RLLFAGYNDYTINVWDVLKGS----------------RVSILFGHENRVSTLRVSPD 337 (354)
T ss_dssp EEEECCTTCCSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCS----------------EEEEECCCSSCEEEEEECTT
T ss_pred EEEEcCCCcccceeEEEEeCCC-CEEEEEECCCcEEEEECCCCc----------------eEEEEECCCCcEEEEEECCC
Confidence 555543 34578999999997 699999999999999997763 23334455668999999999
Q ss_pred CCCEEEEEeCCC-eEEE
Q psy4510 482 LPGTIISTANSG-FNIF 497 (812)
Q Consensus 482 ~~~~~~~~~~~~-~~~~ 497 (812)
+. .+++++.++ +.+|
T Consensus 338 g~-~l~sgs~D~~v~vW 353 (354)
T 2pbi_B 338 GT-AFCSGSWDHTLRVW 353 (354)
T ss_dssp SS-CEEEEETTSEEEEE
T ss_pred CC-EEEEEcCCCCEEec
Confidence 86 455555555 4554
No 41
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3e-39 Score=356.43 Aligned_cols=343 Identities=13% Similarity=0.116 Sum_probs=240.7
Q ss_pred CCCCeeeeeEcCCC---------CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe
Q psy4510 222 HTNSAEDLQWSDLK---------TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 222 h~~~V~~l~~s~~~---------~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
+.+.|.+|+|+|++ ++||+++.++. . -..+|++ .+|++++
T Consensus 132 ~~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~----------------~--------------~~~~~~~-~~laS~s 180 (524)
T 2j04_B 132 VGGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYM----------------D--------------EPLNEHL-EMFDKEK 180 (524)
T ss_dssp CCC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------------------------------------
T ss_pred CCCceeEEEecccCCCCccCcCCeEEEEEEeccc----------------C--------------Cccchhh-hhhccCC
Confidence 56789999999987 78888875421 0 0136887 7899999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-----CeEEEEEECCCeEEEEECCCCCcc--------ccee
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE-----KRVLASCSVDLSIRIWDTRVINTK--------SCML 359 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-----~~~l~s~~~dg~i~iwd~~~~~~~--------~~~~ 359 (812)
.|++|+||++.++.........+.+|.+.|.+++|+|++ ..+||+++.||+|++||+...... .+..
T Consensus 181 ~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~ 260 (524)
T 2j04_B 181 HSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSL 260 (524)
T ss_dssp -CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSE
T ss_pred CCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceE
Confidence 999999999977652111123456788999999999972 237999999999999999754321 1122
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE--EEccCCCcEEEEEECCCCEE
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV--EWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v--~~~p~~~~~l~s~~~dg~v~ 437 (812)
.+ .+|...|++++|++++ .|++|+.||+|++||++. ...+...+.+|...|++| .|+|++..+|++++.|++|+
T Consensus 261 ~l-~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~--~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 261 TL-SLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTD--PEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp EE-CCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTB--CSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred EE-EcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCC--CCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 34 6789999999999864 899999999999999985 234567788999999999 56776547999999999999
Q ss_pred EEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCe
Q psy4510 438 LWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEI 517 (812)
Q Consensus 438 iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 517 (812)
+||++..+.. ..
T Consensus 337 lWD~~~~~~~--------------~~------------------------------------------------------ 348 (524)
T 2j04_B 337 IFNPKDIATT--------------KT------------------------------------------------------ 348 (524)
T ss_dssp EECGGGHHHH--------------CE------------------------------------------------------
T ss_pred EEECCCCCcc--------------cc------------------------------------------------------
Confidence 9998765210 00
Q ss_pred eEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEeccc--ceEEEEEE
Q psy4510 518 KELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHR--GCINRVRT 595 (812)
Q Consensus 518 ~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~--~~v~~l~~ 595 (812)
+.+|. ..|.+++|
T Consensus 349 -----------------------------------------------------------------~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 349 -----------------------------------------------------------------TVSRFRGSNLVPVVY 363 (524)
T ss_dssp -----------------------------------------------------------------EEEECSCCSCCCEEE
T ss_pred -----------------------------------------------------------------cccccccCcccceEe
Confidence 00000 13566889
Q ss_pred eccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEec
Q psy4510 596 CQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 675 (812)
Q Consensus 596 s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~ 675 (812)
+|+++.++++ +.|++|++||+.++. ++.++.+|.+.|++|+||| ++.+|++|
T Consensus 364 sp~~~~l~s~--~~d~tv~lwd~~~~~-------------------------~~~~l~gH~~~V~sva~Sp-~g~~l~Sg 415 (524)
T 2j04_B 364 CPQIYSYIYS--DGASSLRAVPSRAAF-------------------------AVHPLVSRETTITAIGVSR-LHPMVLAG 415 (524)
T ss_dssp ETTTTEEEEE--CSSSEEEEEETTCTT-------------------------CCEEEEECSSCEEEEECCS-SCCBCEEE
T ss_pred CCCcCeEEEe--CCCCcEEEEECcccc-------------------------cceeeecCCCceEEEEeCC-CCCeEEEE
Confidence 9999888887 889999999998875 5677889999999999999 78899999
Q ss_pred CCCceEEEEecCCCc--------------eeEEEEecCCCCEEEeecCCCeEEEeecC-CCCCcccccccccCCCcceeE
Q psy4510 676 DCKRNIHIWTPREAG--------------AWSVYLYTNRFGVLATGDCKRNIHIWTPR-EAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 676 s~Dg~v~iWd~~~~~--------------~~~~~~~s~dg~~lasgs~dg~i~iwd~~-~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+.||+|++|++..+. .+-..+|+|+|+.+.. .. .+++|... ++. ++.++.+|...|.+
T Consensus 416 s~Dgtv~lwd~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~~~~-~~--~~~~~~~~~~g~----~~~~l~gh~~~V~~ 488 (524)
T 2j04_B 416 SADGSLIITNAARRLLHGIKNSSATQKSLRLWKWDYSIKDDKYRI-DS--SYEVYPLTVNDV----SKAKIDAHGINITC 488 (524)
T ss_dssp ETTTEEECCBSCSSTTTCC------CCCCEEEECBCCSSSCEEEE-CC--CCCCCC-----------------CCCSCCC
T ss_pred ECCCEEEEEechHhhccccccCccceeeeEEEEeccCCCCCeEEc-cC--CceecccccCCc----ceeeecCCCceEEE
Confidence 999999999986521 1113457888875532 22 23344333 233 56789999999999
Q ss_pred eEEecCC---ceeEEeeccCCceEEeeecCc
Q psy4510 741 LQWSPGE---KRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 741 l~fs~dg---~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
|+|+|++ . +||+|+.||+||||+++-.
T Consensus 489 Vafsp~~~~~~-~lAsg~~~g~vrlw~l~~~ 518 (524)
T 2j04_B 489 TKWNETSAGGK-CYAFSNSAGLLTLEYLSLE 518 (524)
T ss_dssp EEECCSTTTTT-EEEEECTTSEEEEEECSCC
T ss_pred EECCCCCCccH-HHHhhccCceEEEEEcccc
Confidence 9999995 5 7999999999999998754
No 42
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=8.2e-38 Score=336.71 Aligned_cols=315 Identities=24% Similarity=0.333 Sum_probs=241.4
Q ss_pred EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC--------
Q psy4510 201 IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-------- 272 (812)
Q Consensus 201 v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-------- 272 (812)
..+|+...............+|...|.+++|+|+|++|++++ ++.+++|++.++ ..+..+.+|.
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~fspdg~~la~g~-~~~v~i~~~~~g-------~~~~~l~~~~~~~~~~~~ 113 (393)
T 1erj_A 42 YILYNPALPREIDVELHKSLDHTSVVCCVKFSNDGEYLATGC-NKTTQVYRVSDG-------SLVARLSDDSAANKDPEN 113 (393)
T ss_dssp EEEECTTSCCCEEEEEEEEEECSSCCCEEEECTTSSEEEEEC-BSCEEEEETTTC-------CEEEEECC----------
T ss_pred EEEECCCCCcccCceeEEecCCCCEEEEEEECCCCCEEEEEc-CCcEEEEEecCC-------CEEEEecCcccccccccc
Confidence 446655444332222223336999999999999999999976 689999999875 4455555443
Q ss_pred ----------CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 273 ----------TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 273 ----------~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
..|.+++|+|++ .+|++|+.|++|++||+.++. ....+.+|...|.+++|+|++. .|++++.|+
T Consensus 114 ~~~~~~~~~~~~v~~v~~s~dg-~~l~s~~~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~p~~~-~l~s~s~d~ 187 (393)
T 1erj_A 114 LNTSSSPSSDLYIRSVCFSPDG-KFLATGAEDRLIRIWDIENRK----IVMILQGHEQDIYSLDYFPSGD-KLVSGSGDR 187 (393)
T ss_dssp -------CCCCBEEEEEECTTS-SEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred ccccccCCCceeEEEEEECCCC-CEEEEEcCCCeEEEEECCCCc----EEEEEccCCCCEEEEEEcCCCC-EEEEecCCC
Confidence 248999999999 899999999999999998876 5667889999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEc-------ccCCCCE
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-------KHHTAPV 414 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-------~~h~~~v 414 (812)
+|++||+++ ..+...+ .+...+.+++|+| ++++|++|+.||.|++||++. +..+..+ .+|...|
T Consensus 188 ~v~iwd~~~---~~~~~~~--~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~---~~~~~~~~~~~~~~~~h~~~v 259 (393)
T 1erj_A 188 TVRIWDLRT---GQCSLTL--SIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSET---GFLVERLDSENESGTGHKDSV 259 (393)
T ss_dssp EEEEEETTT---TEEEEEE--ECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTT---CCEEEEEC------CCCSSCE
T ss_pred cEEEEECCC---CeeEEEE--EcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCC---CcEEEeecccccCCCCCCCCE
Confidence 999999984 3344444 3567899999999 788999999999999999984 5555554 5799999
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
++++|+|++ .+|++++.|+.|++||+....... ... .
T Consensus 260 ~~v~~~~~g-~~l~s~s~d~~v~~wd~~~~~~~~-----------------~~~----------~--------------- 296 (393)
T 1erj_A 260 YSVVFTRDG-QSVVSGSLDRSVKLWNLQNANNKS-----------------DSK----------T--------------- 296 (393)
T ss_dssp EEEEECTTS-SEEEEEETTSEEEEEEC-----------------------------------------------------
T ss_pred EEEEECCCC-CEEEEEeCCCEEEEEECCCCCCcc-----------------ccc----------C---------------
Confidence 999999997 699999999999999997652100 000 0
Q ss_pred EEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcccc
Q psy4510 495 NIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRR 574 (812)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 574 (812)
+.
T Consensus 297 -----------------------------~~------------------------------------------------- 298 (393)
T 1erj_A 297 -----------------------------PN------------------------------------------------- 298 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -----------------------------CC-------------------------------------------------
Confidence 00
Q ss_pred CCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC
Q psy4510 575 KDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG 654 (812)
Q Consensus 575 ~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 654 (812)
...+...+.+|...|.+++|+|++.+|+++ +.||.|++||+.++. ++..+.+
T Consensus 299 -~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg--s~D~~v~iwd~~~~~-------------------------~~~~l~~ 350 (393)
T 1erj_A 299 -SGTCEVTYIGHKDFVLSVATTQNDEYILSG--SKDRGVLFWDKKSGN-------------------------PLLMLQG 350 (393)
T ss_dssp ---CEEEEEECCSSCEEEEEECGGGCEEEEE--ETTSEEEEEETTTCC-------------------------EEEEEEC
T ss_pred -CCcceEEEecccCcEEEEEECCCCCEEEEE--eCCCeEEEEECCCCe-------------------------EEEEECC
Confidence 000122456777889999999999999998 899999999998876 6788999
Q ss_pred CCCceEEEEeCCC-----CCCeEEecCCCceEEEEec
Q psy4510 655 HLTEGFAMDWSST-----EPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 655 h~~~V~~l~~sp~-----~~~~las~s~Dg~v~iWd~ 686 (812)
|.+.|.+++|++. ++.+||||+.||+|+||++
T Consensus 351 h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~ 387 (393)
T 1erj_A 351 HRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKY 387 (393)
T ss_dssp CSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEE
T ss_pred CCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECcc
Confidence 9999999999872 2345555555555555554
No 43
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.6e-37 Score=323.65 Aligned_cols=294 Identities=25% Similarity=0.431 Sum_probs=240.7
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
....++.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++. ....+.+|...|.+++|+|+++ +|++|+.||
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~~~-~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~d~ 87 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSPNG-EWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSN-LLVSASDDK 87 (312)
T ss_dssp EEEEEECCCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS-EEEEEETTS
T ss_pred eeEEEEcccCCcEEEEEECCCC-CEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCCC-EEEEECCCC
Confidence 4567789999999999999998 799999999999999998876 5667789999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
.|++||+++ ..++..+ .+|...|.+++|+|++++|++|+.||.|++||++ .++.+..+..|..+|.+++|+|+
T Consensus 88 ~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~---~~~~~~~~~~~~~~v~~~~~~~~ 160 (312)
T 4ery_A 88 TLKIWDVSS---GKCLKTL-KGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVK---TGKCLKTLPAHSDPVSAVHFNRD 160 (312)
T ss_dssp EEEEEETTT---CCEEEEE-ECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEECCC---CcEEEEE-cCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECC---CCEEEEEecCCCCcEEEEEEcCC
Confidence 999999984 4455555 7899999999999999999999999999999998 46788899999999999999998
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+ .+|++++.|+.|++||+...+. +...
T Consensus 161 ~-~~l~~~~~d~~i~~wd~~~~~~-----------------~~~~----------------------------------- 187 (312)
T 4ery_A 161 G-SLIVSSSYDGLCRIWDTASGQC-----------------LKTL----------------------------------- 187 (312)
T ss_dssp S-SEEEEEETTSCEEEEETTTCCE-----------------EEEE-----------------------------------
T ss_pred C-CEEEEEeCCCcEEEEECCCCce-----------------eeEE-----------------------------------
Confidence 6 6999999999999999876521 0000
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
T Consensus 188 -------------------------------------------------------------------------------- 187 (312)
T 4ery_A 188 -------------------------------------------------------------------------------- 187 (312)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEE-
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA- 661 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~- 661 (812)
...+...+..++|+|++++++++ +.||.|++||+.++. ++..+.+|...+..
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~--~~d~~i~iwd~~~~~-------------------------~~~~~~~~~~~~~~~ 240 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAA--TLDNTLKLWDYSKGK-------------------------CLKTYTGHKNEKYCI 240 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEE--ETTTEEEEEETTTTE-------------------------EEEEECSSCCSSSCC
T ss_pred eccCCCceEEEEECCCCCEEEEE--cCCCeEEEEECCCCc-------------------------EEEEEEecCCceEEE
Confidence 00112256778899999999998 899999999998876 56677777654322
Q ss_pred -EEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 662 -MDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 662 -l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
..++ .+++.+|++|+.||.|++||+.+++ ++..+.+|.+.|.+
T Consensus 241 ~~~~~--------------------------------~~~~~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~ 284 (312)
T 4ery_A 241 FANFS--------------------------------VTGGKWIVSGSEDNLVYIWNLQTKE----IVQKLQGHTDVVIS 284 (312)
T ss_dssp CEEEE--------------------------------CSSSCEEEECCTTSCEEEEETTTCC----EEEEECCCSSCEEE
T ss_pred EEEEE--------------------------------eCCCcEEEEECCCCEEEEEECCCch----hhhhhhccCCcEEE
Confidence 2222 2344556666666666666666665 46678899999999
Q ss_pred eEEecCCceeEEeec--cCCceEEeeec
Q psy4510 741 LQWSPGEKRVLASCS--VDRSNRIGARR 766 (812)
Q Consensus 741 l~fs~dg~~~L~s~s--~Dg~i~iWd~~ 766 (812)
++|+|+++ +|++++ .|++|++|+..
T Consensus 285 ~~~~p~~~-~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 285 TACHPTEN-IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp EEECSSSS-EEEEEECTTTCCEEEEECC
T ss_pred EeecCcCC-ceEEEEccCCccEEEecCC
Confidence 99999999 899886 69999999864
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.5e-37 Score=326.01 Aligned_cols=328 Identities=16% Similarity=0.188 Sum_probs=262.0
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
|..+|.+++|+|+|++++++..++.+.+|..... .......+|...|.+++|+|++ .+|++++ ||.|++|+
T Consensus 8 ~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~-dg~i~iw~ 78 (337)
T 1gxr_A 8 GSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRH-------ARQINTLNHGEVVCAVTISNPT-RHVYTGG-KGCVKVWD 78 (337)
T ss_dssp EEEECCEEEECSSSCEEECCCCTTSSSSTTCCSE-------EEEEEEECCSSCCCEEEECSSS-SEEEEEC-BSEEEEEE
T ss_pred cCCceeEEEECCCCCEEEeecCCCcEeccccCCc-------cccceeccCCCceEEEEEecCC-cEEEEcC-CCeEEEEE
Confidence 4568999999999999999888877777755442 3334455899999999999998 7899998 99999999
Q ss_pred CCCCCccee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 302 PREAGAWQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 302 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
+.++..... ......+|...|.+++|+|+++ +|++++.||.|++||++.... .....+ ..|...|.+++|+|++++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~~~d~~~~~~-~~~~~~-~~~~~~i~~~~~~~~~~~ 155 (337)
T 1gxr_A 79 ISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGC-TLIVGGEASTLSIWDLAAPTP-RIKAEL-TSSAPACYALAISPDSKV 155 (337)
T ss_dssp TTSTTCCSCSEEEECSCTTSBEEEEEECTTSS-EEEEEESSSEEEEEECCCC---EEEEEE-ECSSSCEEEEEECTTSSE
T ss_pred CCCCCceeeeecccccCCCCcEEEEEEcCCCC-EEEEEcCCCcEEEEECCCCCc-ceeeec-ccCCCceEEEEECCCCCE
Confidence 987653111 1111227899999999999998 699999999999999985431 123344 678899999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLP 460 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 460 (812)
|++++.||.|++||++ .++.+..+..|...|.+++|+|++ .+|++++.|+.|++||+...+.
T Consensus 156 l~~~~~dg~v~~~d~~---~~~~~~~~~~~~~~i~~~~~~~~~-~~l~~~~~dg~i~~~d~~~~~~-------------- 217 (337)
T 1gxr_A 156 CFSCCSDGNIAVWDLH---NQTLVRQFQGHTDGASCIDISNDG-TKLWTGGLDNTVRSWDLREGRQ-------------- 217 (337)
T ss_dssp EEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTTEE--------------
T ss_pred EEEEeCCCcEEEEeCC---CCceeeeeecccCceEEEEECCCC-CEEEEEecCCcEEEEECCCCce--------------
Confidence 9999999999999998 467788899999999999999986 6999999999999999876510
Q ss_pred CceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceE
Q psy4510 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540 (812)
Q Consensus 461 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~ 540 (812)
..
T Consensus 218 ---~~--------------------------------------------------------------------------- 219 (337)
T 1gxr_A 218 ---LQ--------------------------------------------------------------------------- 219 (337)
T ss_dssp ---EE---------------------------------------------------------------------------
T ss_pred ---Ee---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccc
Q psy4510 541 FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620 (812)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~ 620 (812)
...+...+.+++|+|++++++++ +.+|.|++|++.+
T Consensus 220 ------------------------------------------~~~~~~~v~~~~~s~~~~~l~~~--~~~~~i~~~~~~~ 255 (337)
T 1gxr_A 220 ------------------------------------------QHDFTSQIFSLGYCPTGEWLAVG--MESSNVEVLHVNK 255 (337)
T ss_dssp ------------------------------------------EEECSSCEEEEEECTTSSEEEEE--ETTSCEEEEETTS
T ss_pred ------------------------------------------eecCCCceEEEEECCCCCEEEEE--cCCCcEEEEECCC
Confidence 00112356778899999999988 7899999999987
Q ss_pred cccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCC
Q psy4510 621 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNR 700 (812)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~d 700 (812)
.. ...+.+|...|.+++|+| ++++|++++.||.|++|++.+
T Consensus 256 ~~--------------------------~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~------------ 296 (337)
T 1gxr_A 256 PD--------------------------KYQLHLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPY------------ 296 (337)
T ss_dssp SC--------------------------EEEECCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTT------------
T ss_pred CC--------------------------eEEEcCCccceeEEEECC-CCCEEEEecCCCcEEEEECCC------------
Confidence 64 345778999999999999 676777777777776666543
Q ss_pred CCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 701 FGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 701 g~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
++. . ....|...|.+++|+|+++ +|++++.||.|++|++.
T Consensus 297 --------------------~~~----~-~~~~~~~~v~~~~~s~~~~-~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 297 --------------------GAS----I-FQSKESSSVLSCDISVDDK-YIVTGSGDKKATVYEVI 336 (337)
T ss_dssp --------------------CCE----E-EEEECSSCEEEEEECTTSC-EEEEEETTSCEEEEEEE
T ss_pred --------------------CeE----E-EEecCCCcEEEEEECCCCC-EEEEecCCCeEEEEEEe
Confidence 331 1 2234678899999999999 89999999999999974
No 45
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=2.4e-37 Score=326.17 Aligned_cols=326 Identities=14% Similarity=0.184 Sum_probs=268.4
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
|.++|.+++|+| +|+++|++..++.+.+|...... ......+|...|++++|+|++++|++++ ++.|++|++.+
T Consensus 8 ~~~~v~~~~~s~-dg~~~~~~~~~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~ 81 (337)
T 1gxr_A 8 GSKPAYSFHVTA-DGQMQPVPFPPDALIGPGIPRHA----RQINTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISH 81 (337)
T ss_dssp EEEECCEEEECS-SSCEEECCCCTTSSSSTTCCSEE----EEEEEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTS
T ss_pred cCCceeEEEECC-CCCEEEeecCCCcEeccccCCcc----ccceeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCC
Confidence 457899999999 99999999888877777554433 2333458999999999999999999999 99999999987
Q ss_pred CCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+. ...++..+. +|...|.+++|+|++ .+|++|+.||.|++|++.++.. .....+..|...|.+++|+|+++
T Consensus 82 ~~----~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~~~d~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~ 154 (337)
T 1gxr_A 82 PG----NKSPVSQLDCLNRDNYIRSCKLLPDG-CTLIVGGEASTLSIWDLAAPTP--RIKAELTSSAPACYALAISPDSK 154 (337)
T ss_dssp TT----CCSCSEEEECSCTTSBEEEEEECTTS-SEEEEEESSSEEEEEECCCC----EEEEEEECSSSCEEEEEECTTSS
T ss_pred CC----ceeeeecccccCCCCcEEEEEEcCCC-CEEEEEcCCCcEEEEECCCCCc--ceeeecccCCCceEEEEECCCCC
Confidence 52 223444544 799999999999998 8999999999999999988752 12455678999999999999998
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
+|++++.||.|++||+++ ...+..+ ..|...|.+++|+|++++|++++.||.|++||++. ++.+..+ .|..
T Consensus 155 -~l~~~~~dg~v~~~d~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~---~~~~~~~-~~~~ 225 (337)
T 1gxr_A 155 -VCFSCCSDGNIAVWDLHN---QTLVRQF-QGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLRE---GRQLQQH-DFTS 225 (337)
T ss_dssp -EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEE-ECSS
T ss_pred -EEEEEeCCCcEEEEeCCC---Cceeeee-ecccCceEEEEECCCCCEEEEEecCCcEEEEECCC---CceEeee-cCCC
Confidence 699999999999999984 3445555 67999999999999999999999999999999984 4555555 4788
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
.+.+++|+|++ .+|++++.++.|++||+.....
T Consensus 226 ~v~~~~~s~~~-~~l~~~~~~~~i~~~~~~~~~~---------------------------------------------- 258 (337)
T 1gxr_A 226 QIFSLGYCPTG-EWLAVGMESSNVEVLHVNKPDK---------------------------------------------- 258 (337)
T ss_dssp CEEEEEECTTS-SEEEEEETTSCEEEEETTSSCE----------------------------------------------
T ss_pred ceEEEEECCCC-CEEEEEcCCCcEEEEECCCCCe----------------------------------------------
Confidence 99999999997 6999999999999999875410
Q ss_pred CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCcc
Q psy4510 493 GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDED 572 (812)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 572 (812)
T Consensus 259 -------------------------------------------------------------------------------- 258 (337)
T 1gxr_A 259 -------------------------------------------------------------------------------- 258 (337)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeee
Q psy4510 573 RRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 652 (812)
Q Consensus 573 ~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 652 (812)
..+..|...|.+++|+|++++++++ +.||.|++|++.++. .+ ..
T Consensus 259 --------~~~~~~~~~v~~~~~~~~~~~l~~~--~~dg~i~~~~~~~~~-------------------------~~-~~ 302 (337)
T 1gxr_A 259 --------YQLHLHESCVLSLKFAYCGKWFVST--GKDNLLNAWRTPYGA-------------------------SI-FQ 302 (337)
T ss_dssp --------EEECCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTCC-------------------------EE-EE
T ss_pred --------EEEcCCccceeEEEECCCCCEEEEe--cCCCcEEEEECCCCe-------------------------EE-EE
Confidence 0112234478889999999999988 889999999998875 23 23
Q ss_pred cCCCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 653 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 653 ~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
..|...|.+++|+| ++++|++++.||.|++|++
T Consensus 303 ~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 303 SKESSSVLSCDISV-DDKYIVTGSGDKKATVYEV 335 (337)
T ss_dssp EECSSCEEEEEECT-TSCEEEEEETTSCEEEEEE
T ss_pred ecCCCcEEEEEECC-CCCEEEEecCCCeEEEEEE
Confidence 45888999999999 7889999999999999986
No 46
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.8e-37 Score=320.87 Aligned_cols=292 Identities=20% Similarity=0.378 Sum_probs=246.1
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
.....+.||.+.|++++|+| ++++||+|+.||.|+||++.+++ ....+.+|...|.+++|+|++++|++++.|+.
T Consensus 14 ~~~~~~~gh~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~----~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~ 88 (312)
T 4ery_A 14 ALKFTLAGHTKAVSSVKFSP-NGEWLASSSADKLIKIWGAYDGK----FEKTISGHKLGISDVAWSSDSNLLVSASDDKT 88 (312)
T ss_dssp EEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSSEEEEEETTSE
T ss_pred eeEEEEcccCCcEEEEEECC-CCCEEEEeeCCCeEEEEeCCCcc----cchhhccCCCceEEEEEcCCCCEEEEECCCCE
Confidence 34556679999999999999 99999999999999999998876 56678899999999999999999999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.||.|++||+.++. ....+..|...|.+++
T Consensus 89 i~vwd~~~~-------~~~~~~~~~~~~v~~~~~~~~~-~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~v~~~~ 156 (312)
T 4ery_A 89 LKIWDVSSG-------KCLKTLKGHSNYVFCCNFNPQS-NLIVSGSFDESVRIWDVKTGK----CLKTLPAHSDPVSAVH 156 (312)
T ss_dssp EEEEETTTC-------CEEEEEECCSSCEEEEEECSSS-SEEEEEETTSCEEEEETTTCC----EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------cEEEEEcCCCCCEEEEEEcCCC-CEEEEEeCCCcEEEEECCCCE----EEEEecCCCCcEEEEE
Confidence 999999875 7788999999999999999998 899999999999999999876 5667788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
|+|++. +|++++.||.|++||+++ ..++..+...+...+.+++|+|++++|++++.||.|++||++ .++.+..
T Consensus 157 ~~~~~~-~l~~~~~d~~i~~wd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~---~~~~~~~ 229 (312)
T 4ery_A 157 FNRDGS-LIVSSSYDGLCRIWDTAS---GQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYS---KGKCLKT 229 (312)
T ss_dssp ECTTSS-EEEEEETTSCEEEEETTT---CCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETT---TTEEEEE
T ss_pred EcCCCC-EEEEEeCCCcEEEEECCC---CceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECC---CCcEEEE
Confidence 999998 699999999999999984 344555546677889999999999999999999999999998 4667888
Q ss_pred cccCCCCEE--EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 407 FKHHTAPVT--TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 407 ~~~h~~~v~--~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
+.+|...+. ...+++.+..+|++|+.||.|++||+.... .+.....+...|..++|+|+++.
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~----------------~~~~~~~h~~~v~~~~~~p~~~~ 293 (312)
T 4ery_A 230 YTGHKNEKYCIFANFSVTGGKWIVSGSEDNLVYIWNLQTKE----------------IVQKLQGHTDVVISTACHPTENI 293 (312)
T ss_dssp ECSSCCSSSCCCEEEECSSSCEEEECCTTSCEEEEETTTCC----------------EEEEECCCSSCEEEEEECSSSSE
T ss_pred EEecCCceEEEEEEEEeCCCcEEEEECCCCEEEEEECCCch----------------hhhhhhccCCcEEEEeecCcCCc
Confidence 888876543 234555455799999999999999998773 22233344568999999999865
Q ss_pred EEEEEe-CCC-eEEEE
Q psy4510 485 TIISTA-NSG-FNIFR 498 (812)
Q Consensus 485 ~~~~~~-~~~-~~~~~ 498 (812)
++.++. .++ +.+|+
T Consensus 294 l~s~~~~~d~~i~~W~ 309 (312)
T 4ery_A 294 IASAALENDKTIKLWK 309 (312)
T ss_dssp EEEEECTTTCCEEEEE
T ss_pred eEEEEccCCccEEEec
Confidence 444432 344 55654
No 47
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.5e-39 Score=352.81 Aligned_cols=240 Identities=12% Similarity=0.073 Sum_probs=190.0
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC------CCcEEEeeCCCceEEeeCCCCCCCC----C
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL------KTALQTVDDPFQLAEHNKKRGKGPG----I 260 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~------~~~l~s~~~d~~i~vwd~~~~~~~~----~ 260 (812)
+||+|+.|++|+||++.+++........+.+|.+.|.+++|+|+ +.+||+++.|++|++|++..+.... .
T Consensus 175 ~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~ 254 (524)
T 2j04_B 175 MFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKM 254 (524)
T ss_dssp -------CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEEC
T ss_pred hhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCcccccccee
Confidence 34446688999999998765322223446778899999999997 5799999999999999998752110 1
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE--EEcCCCCeEEEEE
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL--QWSPGEKRVLASC 338 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~--~~~p~~~~~l~s~ 338 (812)
...+..++.+|...|.+++|+|+ ..|++|+.||+|++||+.++.. ....+.+|...|+++ +|+|++.++|+||
T Consensus 255 ~~~p~~~l~~h~~~v~sv~~s~~--~~lasgs~DgtV~lWD~~~~~~---~~~~~~~H~~~V~sv~~~~s~~g~~~laS~ 329 (524)
T 2j04_B 255 CEKPSLTLSLADSLITTFDFLSP--TTVVCGFKNGFVAEFDLTDPEV---PSFYDQVHDSYILSVSTAYSDFEDTVVSTV 329 (524)
T ss_dssp CCSCSEEECCTTTCEEEEEESSS--SEEEEEETTSEEEEEETTBCSS---CSEEEECSSSCEEEEEEECCTTSCCEEEEE
T ss_pred ecCceEEEEcCCCCEEEEEecCC--CeEEEEeCCCEEEEEECCCCCC---ceEEeecccccEEEEEEEcCCCCCeEEEEe
Confidence 12456789999999999999986 5899999999999999987642 344578899999999 5678773489999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCC--CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHT--SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~--~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 416 (812)
+.|++|+|||+++ ..++..+ .+|. ..|.+++|+|+++.|++++.|++|++||++. ...+..+.+|.+.|++
T Consensus 330 S~D~tvklWD~~~---~~~~~~~-~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~---~~~~~~l~gH~~~V~s 402 (524)
T 2j04_B 330 AVDGYFYIFNPKD---IATTKTT-VSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRA---AFAVHPLVSRETTITA 402 (524)
T ss_dssp ETTSEEEEECGGG---HHHHCEE-EEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTC---TTCCEEEEECSSCEEE
T ss_pred ccCCeEEEEECCC---CCccccc-ccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcc---cccceeeecCCCceEE
Confidence 9999999999984 3333333 3443 3588999999999999999999999999984 5667788899999999
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
|+|+|++ .+|++|+.|++|++||+..
T Consensus 403 va~Sp~g-~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 403 IGVSRLH-PMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EECCSSC-CBCEEEETTTEEECCBSCS
T ss_pred EEeCCCC-CeEEEEECCCEEEEEechH
Confidence 9999997 5899999999999999754
No 48
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=6.2e-37 Score=323.51 Aligned_cols=309 Identities=21% Similarity=0.301 Sum_probs=244.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
....+|+||.+.|++|+|+|+++.+|+||+.||+|+|||+.+... .......+.+|...|.+++|+|+++ +|++++.|
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~-~l~s~~~d 107 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQ-FALSGSWD 107 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSS-EEEEEETT
T ss_pred EEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCC-EEEEEccc
Confidence 445679999999999999998668999999999999999987653 2234567889999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
+.|++|+.... ...... ..+...+..+.+++.+++|++|+.|+.+++||++. .........+|...+..++|++
T Consensus 108 ~~i~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~--~~~~~~~~~~~~~~v~~~~~~~ 181 (340)
T 4aow_A 108 GTLRLWDLTTG---TTTRRF-VGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLG--VCKYTVQDESHSEWVSCVRFSP 181 (340)
T ss_dssp SEEEEEETTTT---EEEEEE-ECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTS--CEEEEECSSSCSSCEEEEEECS
T ss_pred ccceEEeeccc---ceeeee-cCCCCceeEEEEeecCccceeecCCCeEEEEEeCC--CceEEEEeccccCcccceEEcc
Confidence 99999999843 223333 56778899999999999999999999999999974 3344556778999999999998
Q ss_pred CCC-cEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 422 TES-STFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 422 ~~~-~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
++. .++++++.|+.|++||+...+.
T Consensus 182 ~~~~~~~~s~~~d~~i~i~d~~~~~~------------------------------------------------------ 207 (340)
T 4aow_A 182 NSSNPIIVSCGWDKLVKVWNLANCKL------------------------------------------------------ 207 (340)
T ss_dssp CSSSCEEEEEETTSCEEEEETTTTEE------------------------------------------------------
T ss_pred CCCCcEEEEEcCCCEEEEEECCCCce------------------------------------------------------
Confidence 753 4788999999999999876510
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccc
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMN 580 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (812)
.
T Consensus 208 -------------------------------------------------------------------------------~ 208 (340)
T 4aow_A 208 -------------------------------------------------------------------------------K 208 (340)
T ss_dssp -------------------------------------------------------------------------------E
T ss_pred -------------------------------------------------------------------------------e
Confidence 1
Q ss_pred eEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceE
Q psy4510 581 SYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 660 (812)
Q Consensus 581 ~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 660 (812)
..+.+|.+.|++++|+|++++|+++ +.||.|++||+.+.. ++..+.++ ..|.
T Consensus 209 ~~~~~h~~~v~~~~~s~~~~~l~s~--s~Dg~i~iwd~~~~~-------------------------~~~~~~~~-~~v~ 260 (340)
T 4aow_A 209 TNHIGHTGYLNTVTVSPDGSLCASG--GKDGQAMLWDLNEGK-------------------------HLYTLDGG-DIIN 260 (340)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEE--ETTCEEEEEETTTTE-------------------------EEEEEECS-SCEE
T ss_pred eEecCCCCcEEEEEECCCCCEEEEE--eCCCeEEEEEeccCc-------------------------eeeeecCC-ceEE
Confidence 1223455688899999999999998 899999999998876 45566544 5899
Q ss_pred EEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 661 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 661 ~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+++|+| ++ .+++++.|+.|++||+.++.... .+.... ......+|...|++
T Consensus 261 ~~~~~~-~~-~~~~~~~d~~i~iwd~~~~~~~~-----------------------~~~~~~----~~~~~~~h~~~v~~ 311 (340)
T 4aow_A 261 ALCFSP-NR-YWLCAATGPSIKIWDLEGKIIVD-----------------------ELKQEV----ISTSSKAEPPQCTS 311 (340)
T ss_dssp EEEECS-SS-SEEEEEETTEEEEEETTTTEEEE-----------------------EECCC-----------CCCCCEEE
T ss_pred eeecCC-CC-ceeeccCCCEEEEEECCCCeEEE-----------------------eccccc----eeeeccCCCCCEEE
Confidence 999999 55 56667789999999986543322 222111 23456789999999
Q ss_pred eEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 741 LQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 741 l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
|+|+|||+ +||||+.||+|+|||++.|.
T Consensus 312 l~~s~dg~-~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 312 LAWSADGQ-TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEECTTSS-EEEEEETTSCEEEEEEEC--
T ss_pred EEECCCCC-EEEEEeCCCEEEEEeCCCcC
Confidence 99999999 89999999999999999874
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=1e-36 Score=321.90 Aligned_cols=328 Identities=20% Similarity=0.259 Sum_probs=242.1
Q ss_pred EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC
Q psy4510 194 TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL 272 (812)
Q Consensus 194 t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~ 272 (812)
+|-..|+..+|-............+|.||.+.|++|+|+|+ +++|+||+.|++|+|||+...... ...+...+.+|.
T Consensus 9 ~g~d~g~~~~~~~~~~~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~--~~~~~~~l~~h~ 86 (340)
T 4aow_A 9 SGVDLGTENLYFQSMMTEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETN--YGIPQRALRGHS 86 (340)
T ss_dssp -----------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSC--SEEEEEEECCCS
T ss_pred cccCCCCccEEEEEccCCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcc--cceeeEEEeCCC
Confidence 34444554444323222222355679999999999999998 679999999999999999875210 123567889999
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..|.+++|+|++ .+|++|+.|+.|++|+..... .......+...+..+.+++++. +|++++.|+.+++||+...
T Consensus 87 ~~V~~~~~s~dg-~~l~s~~~d~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~l~s~s~d~~~~~~d~~~~ 160 (340)
T 4aow_A 87 HFVSDVVISSDG-QFALSGSWDGTLRLWDLTTGT----TTRRFVGHTKDVLSVAFSSDNR-QIVSGSRDKTIKLWNTLGV 160 (340)
T ss_dssp SCEEEEEECTTS-SEEEEEETTSEEEEEETTTTE----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSC
T ss_pred CCEEEEEECCCC-CEEEEEcccccceEEeecccc----eeeeecCCCCceeEEEEeecCc-cceeecCCCeEEEEEeCCC
Confidence 999999999999 899999999999999998876 4555667888899999999998 5999999999999998742
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCC--EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEP--LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~--~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
........+|...+.+++|++++. ++++++.|+.|++||++ ..+.+..+.+|.++|++++|+|++ .+|++|
T Consensus 161 ---~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~---~~~~~~~~~~h~~~v~~~~~s~~~-~~l~s~ 233 (340)
T 4aow_A 161 ---CKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLA---NCKLKTNHIGHTGYLNTVTVSPDG-SLCASG 233 (340)
T ss_dssp ---EEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETT---TTEEEEEECCCSSCEEEEEECTTS-SEEEEE
T ss_pred ---ceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECC---CCceeeEecCCCCcEEEEEECCCC-CEEEEE
Confidence 223333478999999999998764 88999999999999998 567888999999999999999987 699999
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI 510 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (812)
+.|+.|++||+...+ .+...
T Consensus 234 s~Dg~i~iwd~~~~~-----------------~~~~~------------------------------------------- 253 (340)
T 4aow_A 234 GKDGQAMLWDLNEGK-----------------HLYTL------------------------------------------- 253 (340)
T ss_dssp ETTCEEEEEETTTTE-----------------EEEEE-------------------------------------------
T ss_pred eCCCeEEEEEeccCc-----------------eeeee-------------------------------------------
Confidence 999999999987652 11000
Q ss_pred ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceE
Q psy4510 511 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCI 590 (812)
Q Consensus 511 ~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v 590 (812)
.+...+
T Consensus 254 --------------------------------------------------------------------------~~~~~v 259 (340)
T 4aow_A 254 --------------------------------------------------------------------------DGGDII 259 (340)
T ss_dssp --------------------------------------------------------------------------ECSSCE
T ss_pred --------------------------------------------------------------------------cCCceE
Confidence 001245
Q ss_pred EEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCC
Q psy4510 591 NRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG 670 (812)
Q Consensus 591 ~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~ 670 (812)
.+++|+|++. ++++ +.|+.|++||+.+........ .........+|...|++++|+| +++
T Consensus 260 ~~~~~~~~~~-~~~~--~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~~~~h~~~v~~l~~s~-dg~ 319 (340)
T 4aow_A 260 NALCFSPNRY-WLCA--ATGPSIKIWDLEGKIIVDELK----------------QEVISTSSKAEPPQCTSLAWSA-DGQ 319 (340)
T ss_dssp EEEEECSSSS-EEEE--EETTEEEEEETTTTEEEEEEC----------------CC-------CCCCCEEEEEECT-TSS
T ss_pred EeeecCCCCc-eeec--cCCCEEEEEECCCCeEEEecc----------------ccceeeeccCCCCCEEEEEECC-CCC
Confidence 6677777765 4444 568999999998764210000 0112334568999999999999 788
Q ss_pred eEEecCCCceEEEEecCCCc
Q psy4510 671 VLATGDCKRNIHIWTPREAG 690 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~ 690 (812)
+|++|+.||+|+|||+.+|.
T Consensus 320 ~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 320 TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEEETTSCEEEEEEEC--
T ss_pred EEEEEeCCCEEEEEeCCCcC
Confidence 99999999999999987653
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=6e-37 Score=334.02 Aligned_cols=243 Identities=14% Similarity=0.183 Sum_probs=203.6
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+++++|+| ++++|++|+.||.|++||+.+.. ....+..| ..+...+|++++++|++++.++.|++|++.++
T Consensus 57 ~~~~~~~~s~-~g~~l~~~~~d~~v~i~d~~~~~----~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~- 129 (420)
T 3vl1_A 57 DAGKGNTFEK-VGSHLYKARLDGHDFLFNTIIRD----GSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFN- 129 (420)
T ss_dssp BCCTTCEEEE-EETTEEEEEETTEEEEEECCSEE----TTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSC-
T ss_pred ccccceeeee-cCCeEEEEEcCCcEEEEEecccc----eeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCc-
Confidence 4455689999 99999999999999999998765 44555555 45556688999999999999999999999874
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.+...+.+|.+.|.+++|+|++ .+|++|+.|+.|++||+.++. ....+.+|...|.+++|+|+++ +|+
T Consensus 130 ------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~s~d~~i~iwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~ 197 (420)
T 3vl1_A 130 ------LQREIDQAHVSEITKLKFFPSG-EALISSSQDMQLKIWSVKDGS----NPRTLIGHRATVTDIAIIDRGR-NVL 197 (420)
T ss_dssp ------EEEEETTSSSSCEEEEEECTTS-SEEEEEETTSEEEEEETTTCC----CCEEEECCSSCEEEEEEETTTT-EEE
T ss_pred ------ceeeecccccCccEEEEECCCC-CEEEEEeCCCeEEEEeCCCCc----CceEEcCCCCcEEEEEEcCCCC-EEE
Confidence 5666778999999999999998 799999999999999999887 5677889999999999999998 699
Q ss_pred EEECCCeEEEEECCCCCcccceeecC--CcCCCCe---------------------EEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLP--NAHTSDV---------------------NVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~--~~~~~~v---------------------~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
+++.||.|++||++++. ++..+. ..|...| .+++|+|++++|++|+.||.|++|
T Consensus 198 s~~~d~~v~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~ 274 (420)
T 3vl1_A 198 SASLDGTIRLWECGTGT---TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVH 274 (420)
T ss_dssp EEETTSCEEEEETTTTE---EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEE
T ss_pred EEcCCCcEEEeECCCCc---eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEE
Confidence 99999999999998543 333331 2344444 445567889999999999999999
Q ss_pred ecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|++. +..+..+ ..|...|++++|+|++..+|++++.||.|++||++..
T Consensus 275 d~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~ 323 (420)
T 3vl1_A 275 NVFS---KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSP 323 (420)
T ss_dssp ETTT---CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCT
T ss_pred ECCC---CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9984 4444444 5688999999999998659999999999999999876
No 51
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.9e-36 Score=326.11 Aligned_cols=306 Identities=22% Similarity=0.326 Sum_probs=230.8
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC------------------CCCEEEEEEcCC
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH------------------TNSVEDLQWSPG 330 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h------------------~~~v~~~~~~p~ 330 (812)
.+|.+.|.+++|+|++ .+|++|+ ++.+++|++.++.. ...+..| ...|++++|+|+
T Consensus 61 ~~h~~~V~~v~fspdg-~~la~g~-~~~v~i~~~~~g~~----~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~d 134 (393)
T 1erj_A 61 LDHTSVVCCVKFSNDG-EYLATGC-NKTTQVYRVSDGSL----VARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPD 134 (393)
T ss_dssp EECSSCCCEEEECTTS-SEEEEEC-BSCEEEEETTTCCE----EEEECC-----------------CCCCBEEEEEECTT
T ss_pred cCCCCEEEEEEECCCC-CEEEEEc-CCcEEEEEecCCCE----EEEecCccccccccccccccccCCCceeEEEEEECCC
Confidence 3699999999999999 7888876 68999999988763 2333322 235999999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
++ +|++|+.||.|++||+.+ ...+..+ .+|...|.+++|+|++++|++|+.|+.|++||++. ++....+. +
T Consensus 135 g~-~l~s~~~d~~i~iwd~~~---~~~~~~~-~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~---~~~~~~~~-~ 205 (393)
T 1erj_A 135 GK-FLATGAEDRLIRIWDIEN---RKIVMIL-QGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRT---GQCSLTLS-I 205 (393)
T ss_dssp SS-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT---TEEEEEEE-C
T ss_pred CC-EEEEEcCCCeEEEEECCC---CcEEEEE-ccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCC---CeeEEEEE-c
Confidence 98 699999999999999984 3445555 78999999999999999999999999999999983 55555554 5
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+.+++|+|.++.+|++|+.|+.|++||+.+... .....
T Consensus 206 ~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~-----------------~~~~~---------------------- 246 (393)
T 1erj_A 206 EDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFL-----------------VERLD---------------------- 246 (393)
T ss_dssp SSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCE-----------------EEEEC----------------------
T ss_pred CCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcE-----------------EEeec----------------------
Confidence 678999999995457999999999999999876521 00000
Q ss_pred CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCC
Q psy4510 491 NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGD 570 (812)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 570 (812)
.
T Consensus 247 ---------------------------------~---------------------------------------------- 247 (393)
T 1erj_A 247 ---------------------------------S---------------------------------------------- 247 (393)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---------------------------------c----------------------------------------------
Confidence 0
Q ss_pred ccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCee
Q psy4510 571 EDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 650 (812)
Q Consensus 571 ~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 650 (812)
......+|...|.+++|+|++++|+++ +.||.|++||+.......... ......+..
T Consensus 248 --------~~~~~~~h~~~v~~v~~~~~g~~l~s~--s~d~~v~~wd~~~~~~~~~~~-------------~~~~~~~~~ 304 (393)
T 1erj_A 248 --------ENESGTGHKDSVYSVVFTRDGQSVVSG--SLDRSVKLWNLQNANNKSDSK-------------TPNSGTCEV 304 (393)
T ss_dssp -------------CCCSSCEEEEEECTTSSEEEEE--ETTSEEEEEEC----------------------------CEEE
T ss_pred --------cccCCCCCCCCEEEEEECCCCCEEEEE--eCCCEEEEEECCCCCCccccc-------------CCCCCcceE
Confidence 000123566789999999999999998 899999999998754211000 001123566
Q ss_pred eecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccc
Q psy4510 651 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP 730 (812)
Q Consensus 651 ~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~ 730 (812)
.+.+|...|.+++|+| ++.+|++|+.|++|++||+ .+++ .+..
T Consensus 305 ~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~--------------------------------~~~~----~~~~ 347 (393)
T 1erj_A 305 TYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDK--------------------------------KSGN----PLLM 347 (393)
T ss_dssp EEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEET--------------------------------TTCC----EEEE
T ss_pred EEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEEC--------------------------------CCCe----EEEE
Confidence 7889999999999999 5656666666655555554 4444 3456
Q ss_pred ccCCCcceeEeEEec------CCceeEEeeccCCceEEeeecCc
Q psy4510 731 LVGHTNSVEDLQWSP------GEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 731 ~~gH~~~V~~l~fs~------dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
+.+|.+.|.+++|++ ++. +|||||.||+|+||+++..
T Consensus 348 l~~h~~~v~~v~~~~~~~~~p~~~-~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 348 LQGHRNSVISVAVANGSSLGPEYN-VFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EECCSSCEEEEEECSSCTTCTTCE-EEEEEETTSEEEEEEEEEC
T ss_pred ECCCCCCEEEEEecCCcCcCCCCC-EEEEECCCCcEEECccccc
Confidence 789999999999986 677 8999999999999998764
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=100.00 E-value=7.6e-37 Score=333.24 Aligned_cols=341 Identities=12% Similarity=0.126 Sum_probs=262.5
Q ss_pred EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc
Q psy4510 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT 354 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 354 (812)
+.+++|+|++ .+|++|+.||.|++|++.+.. ....+..| ..+....|+|+++ +|++|+.||.|++||++.
T Consensus 59 ~~~~~~s~~g-~~l~~~~~d~~v~i~d~~~~~----~~~~~~~~-~~~~~~~~~~~~~-~l~~~~~dg~i~iwd~~~--- 128 (420)
T 3vl1_A 59 GKGNTFEKVG-SHLYKARLDGHDFLFNTIIRD----GSKMLKRA-DYTAVDTAKLQMR-RFILGTTEGDIKVLDSNF--- 128 (420)
T ss_dssp CTTCEEEEEE-TTEEEEEETTEEEEEECCSEE----TTTTSCSC-CEEEEEEECSSSC-EEEEEETTSCEEEECTTS---
T ss_pred ccceeeeecC-CeEEEEEcCCcEEEEEecccc----eeeEEecC-CceEEEEEecCCC-EEEEEECCCCEEEEeCCC---
Confidence 4478999999 789999999999999998765 34445555 4555667899998 699999999999999983
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
......+ ..|...|++++|+|++++|++|+.||.|++||++ .++.+..+.+|...|++++|+|++ .+|++++.|+
T Consensus 129 ~~~~~~~-~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~---~~~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~d~ 203 (420)
T 3vl1_A 129 NLQREID-QAHVSEITKLKFFPSGEALISSSQDMQLKIWSVK---DGSNPRTLIGHRATVTDIAIIDRG-RNVLSASLDG 203 (420)
T ss_dssp CEEEEET-TSSSSCEEEEEECTTSSEEEEEETTSEEEEEETT---TCCCCEEEECCSSCEEEEEEETTT-TEEEEEETTS
T ss_pred cceeeec-ccccCccEEEEECCCCCEEEEEeCCCeEEEEeCC---CCcCceEEcCCCCcEEEEEEcCCC-CEEEEEcCCC
Confidence 3344444 7899999999999999999999999999999998 466788899999999999999986 6999999999
Q ss_pred CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCC
Q psy4510 435 QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQ 514 (812)
Q Consensus 435 ~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (812)
.|++||+.+.+ .......+. .+.
T Consensus 204 ~v~iwd~~~~~-----------------~~~~~~~~~----------------------------------------~~~ 226 (420)
T 3vl1_A 204 TIRLWECGTGT-----------------TIHTFNRKE----------------------------------------NPH 226 (420)
T ss_dssp CEEEEETTTTE-----------------EEEEECBTT----------------------------------------BTT
T ss_pred cEEEeECCCCc-----------------eeEEeecCC----------------------------------------CCC
Confidence 99999998763 111111000 011
Q ss_pred CCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEE
Q psy4510 515 KEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVR 594 (812)
Q Consensus 515 ~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~ 594 (812)
..+.++++.|..... ....+...+.+++
T Consensus 227 ~~v~~~~~~~~~~~~----------------------------------------------------~~~~~~~~v~~~~ 254 (420)
T 3vl1_A 227 DGVNSIALFVGTDRQ----------------------------------------------------LHEISTSKKNNLE 254 (420)
T ss_dssp CCEEEEEEEECCCSS----------------------------------------------------CGGGCCCCCCTTC
T ss_pred CCccEEEEecCCcce----------------------------------------------------eeecccCcccceE
Confidence 234444444431100 1122344677889
Q ss_pred EeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCC-eEE
Q psy4510 595 TCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLA 673 (812)
Q Consensus 595 ~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~-~la 673 (812)
|+|++++++++ +.||.|++||+.++.. ......+|...|++++|+| ++. +|+
T Consensus 255 ~s~~~~~l~~~--~~dg~i~i~d~~~~~~------------------------~~~~~~~~~~~v~~~~~~~-~~~~~l~ 307 (420)
T 3vl1_A 255 FGTYGKYVIAG--HVSGVITVHNVFSKEQ------------------------TIQLPSKFTCSCNSLTVDG-NNANYIY 307 (420)
T ss_dssp SSCTTEEEEEE--ETTSCEEEEETTTCCE------------------------EEEECCTTSSCEEEEEECS-SCTTEEE
T ss_pred EcCCCCEEEEE--cCCCeEEEEECCCCce------------------------eEEcccccCCCceeEEEeC-CCCCEEE
Confidence 99999999998 8999999999988752 2333456889999999999 565 999
Q ss_pred ecCCCceEEEEecCCCce------------eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcc-----cccccccCCCc
Q psy4510 674 TGDCKRNIHIWTPREAGA------------WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQ-----VDQKPLVGHTN 736 (812)
Q Consensus 674 s~s~Dg~v~iWd~~~~~~------------~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~-----~~~~~~~gH~~ 736 (812)
+++.||.|++||+.+++. +..+ +.+++++|++|+.|++|++|++....... .....+.+|.+
T Consensus 308 ~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 386 (420)
T 3vl1_A 308 AGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDD 386 (420)
T ss_dssp EEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSC
T ss_pred EEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCc
Confidence 999999999999987432 2333 45578999999999999999998743211 01234678889
Q ss_pred ceeEeEEecCCc---eeEEeeccCCceEEeeecCc
Q psy4510 737 SVEDLQWSPGEK---RVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 737 ~V~~l~fs~dg~---~~L~s~s~Dg~i~iWd~~~~ 768 (812)
.|.+++|+|+++ + |+++|.+|.+++|++.++
T Consensus 387 ~v~~~~~s~~~~~~g~-l~a~g~~g~~~~~~~~~~ 420 (420)
T 3vl1_A 387 AVSQFCYVSDDESNGE-VLEVGKNNFCALYNLSNP 420 (420)
T ss_dssp CCCEEEEECCSSSSCE-EEEEETTTEEEEEESCC-
T ss_pred ceEEEEEccCCCCcce-EEEEcCCceEEEEeccCC
Confidence 999999999998 5 666777899999998763
No 53
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3e-36 Score=318.22 Aligned_cols=309 Identities=19% Similarity=0.283 Sum_probs=237.0
Q ss_pred CCccCcCCCCCceEEEEe-----CCCCCCeEEEecCCCcEEEEccCCCCcc---cccccccCCCCCCeeeeeEcCCCCcE
Q psy4510 167 PPLFSFSGHLTEGFAMDW-----SSTEPGVLATGDCKRNIHIWTPREAGAW---QVDQKPLGGHTNSAEDLQWSDLKTAL 238 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~-----sp~~~~~lat~~~dg~v~iwd~~~~~~~---~~~~~~l~~h~~~V~~l~~s~~~~~l 238 (812)
..+..+.||.+.|++++| +|.++++||||+.|++|+|||+...+.. ......+.+|...|.+++|+|++.+|
T Consensus 12 ~~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l 91 (343)
T 2xzm_R 12 VKRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFA 91 (343)
T ss_dssp EEEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEE
T ss_pred eeeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEE
Confidence 445667799999999999 6658999999999999999999765421 22456788999999999999999999
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH 318 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h 318 (812)
++++.|++|++||+.++ +++..+.+|...|.+++|+|++ .+|++|+.|++|++||+.... ........+|
T Consensus 92 ~s~s~D~~v~lwd~~~~-------~~~~~~~~h~~~v~~v~~sp~~-~~l~s~~~d~~i~~wd~~~~~--~~~~~~~~~~ 161 (343)
T 2xzm_R 92 ISSSWDKTLRLWDLRTG-------TTYKRFVGHQSEVYSVAFSPDN-RQILSAGAEREIKLWNILGEC--KFSSAEKENH 161 (343)
T ss_dssp EEEETTSEEEEEETTSS-------CEEEEEECCCSCEEEEEECSST-TEEEEEETTSCEEEEESSSCE--EEECCTTTSC
T ss_pred EEEcCCCcEEEEECCCC-------cEEEEEcCCCCcEEEEEECCCC-CEEEEEcCCCEEEEEeccCCc--eeeeecccCC
Confidence 99999999999999885 7788999999999999999998 799999999999999997432 1122334478
Q ss_pred CCCEEEEEEcCCCC---------eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc
Q psy4510 319 TNSVEDLQWSPGEK---------RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC 389 (812)
Q Consensus 319 ~~~v~~~~~~p~~~---------~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~ 389 (812)
...|.+++|+|++. .+|++++.||.|++||.+ ......+ .+|...|++++|+|++++|++|+.||.
T Consensus 162 ~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~----~~~~~~~-~~h~~~v~~~~~s~~g~~l~sgs~dg~ 236 (343)
T 2xzm_R 162 SDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN----FQIRYTF-KAHESNVNHLSISPNGKYIATGGKDKK 236 (343)
T ss_dssp SSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT----TEEEEEE-ECCSSCEEEEEECTTSSEEEEEETTCE
T ss_pred CceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC----CceeEEE-cCccccceEEEECCCCCEEEEEcCCCe
Confidence 99999999999872 379999999999999954 2334444 689999999999999999999999999
Q ss_pred EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEE-eec
Q psy4510 390 IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLF-IHL 468 (812)
Q Consensus 390 i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 468 (812)
|++||++. ...+...+. +...|.+++|+|++ .+++ ++.|+.|++||+.+....... .....+..... ...
T Consensus 237 v~iwd~~~--~~~~~~~~~-~~~~v~~v~~sp~~-~~la-~~~d~~v~iw~~~~~~~~~~~----~~~~~~~~~~~~~~~ 307 (343)
T 2xzm_R 237 LLIWDILN--LTYPQREFD-AGSTINQIAFNPKL-QWVA-VGTDQGVKIFNLMTQSKAPVC----TIEAEPITKAEGQKG 307 (343)
T ss_dssp EEEEESSC--CSSCSEEEE-CSSCEEEEEECSSS-CEEE-EEESSCEEEEESSSCCSCSEE----ECCCCSGGGBTTBCC
T ss_pred EEEEECCC--Ccccceeec-CCCcEEEEEECCCC-CEEE-EECCCCEEEEEeCCCCCCceE----EeecCcchhhhhhcC
Confidence 99999964 233444443 55679999999986 4555 556888999999876421000 00000000000 012
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
+...|.+++|+|++..+++++.++.+.+|..
T Consensus 308 ~~~~v~~~~~sp~g~~l~sg~~Dg~v~~w~~ 338 (343)
T 2xzm_R 308 KNPQCTSLAWNALGKKLFAGFTDGVIRTFSF 338 (343)
T ss_dssp SCCCEEEEEECSSSCCEEEEETTSEEEEEEE
T ss_pred CCCceEEEEECCCCCeEEEecCCceEEEEEE
Confidence 3346999999999876555444444566653
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.3e-37 Score=338.21 Aligned_cols=315 Identities=15% Similarity=0.208 Sum_probs=240.1
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.......+|...|++|+|+|..+.+||+|+.||+|+|||+.++... ....+.+|.+.|++|+|+|.+..+|++|+.||
T Consensus 110 ~~~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~ 187 (435)
T 4e54_B 110 RILQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEG 187 (435)
T ss_dssp TSCCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSS
T ss_pred eecccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCC
Confidence 4445677899999999999977689999999999999999876531 23456789999999999995444799999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+|++||++... .. .......+...+.+++|+|++++|++|+.||.|++||++ ++.+..+.+|...|++++|+|+
T Consensus 188 ~v~iwd~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~----~~~~~~~~~h~~~v~~v~~~p~ 261 (435)
T 4e54_B 188 TTRLQDFKGNI-LR-VFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD----GKELWNLRMHKKKVTHVALNPC 261 (435)
T ss_dssp CEEEEETTSCE-EE-EEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS----SCBCCCSBCCSSCEEEEEECTT
T ss_pred EEEEeeccCCc-ee-EEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC----cceeEEEecccceEEeeeecCC
Confidence 99999997421 11 111113445568899999999999999999999999996 4567788999999999999999
Q ss_pred CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 423 ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 423 ~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
+..+|++++.|+.|++||++......
T Consensus 262 ~~~~~~s~s~d~~v~iwd~~~~~~~~------------------------------------------------------ 287 (435)
T 4e54_B 262 CDWFLATASVDQTVKIWDLRQVRGKA------------------------------------------------------ 287 (435)
T ss_dssp CSSEEEEEETTSBCCEEETTTCCSSS------------------------------------------------------
T ss_pred CceEEEEecCcceeeEEecccccccc------------------------------------------------------
Confidence 88899999999999999997653100
Q ss_pred CCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceE
Q psy4510 503 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSY 582 (812)
Q Consensus 503 ~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 582 (812)
....
T Consensus 288 ----------------------------------------------------------------------------~~~~ 291 (435)
T 4e54_B 288 ----------------------------------------------------------------------------SFLY 291 (435)
T ss_dssp ----------------------------------------------------------------------------CCSB
T ss_pred ----------------------------------------------------------------------------eEEE
Confidence 0001
Q ss_pred EecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCC-----
Q psy4510 583 FIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT----- 657 (812)
Q Consensus 583 ~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~----- 657 (812)
..+|...|++++|+|+|++|+++ +.||.|+|||+.++. +...+.+|..
T Consensus 292 ~~~h~~~v~~~~~spdg~~l~s~--~~D~~i~iwd~~~~~-------------------------~~~~~~~~~~~~~~~ 344 (435)
T 4e54_B 292 SLPHRHPVNAACFSPDGARLLTT--DQKSEIRVYSASQWD-------------------------CPLGLIPHPHRHFQH 344 (435)
T ss_dssp CCBCSSCEEECCBCTTSSEEEEE--ESSSCEEEEESSSSS-------------------------SEEEECCCCCCCCSS
T ss_pred eeeccccccceeECCCCCeeEEE--cCCCEEEEEECCCCc-------------------------cceEEeccccccccc
Confidence 23466689999999999999998 899999999998875 3333444432
Q ss_pred -ceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEE-eecCCCeEEEeecCCCCCcccccccccCCC
Q psy4510 658 -EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHT 735 (812)
Q Consensus 658 -~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~la-sgs~dg~i~iwd~~~~~~~~~~~~~~~gH~ 735 (812)
.+..+.|+| ++.++++++ ++++.+++ ++..++.|++||..+++. +.....+|.
T Consensus 345 ~~~~~~~~~~-~~~~~~~~~---------------------~~d~~~~~~~~~~~~~i~iwd~~~g~~---~~~l~~~~~ 399 (435)
T 4e54_B 345 LTPIKAAWHP-RYNLIVVGR---------------------YPDPNFKSCTPYELRTIDVFDGNSGKM---MCQLYDPES 399 (435)
T ss_dssp SCCCBCEECS-SSSCEEEEC---------------------CCCTTSCCSSTTCCCCEEEECSSSCCE---EEEECCSSC
T ss_pred ceeEEEEEcC-CCCEEEEEE---------------------cCCCCeEEEEecCCCEEEEEECCCCcE---EEEEeCCCC
Confidence 344567888 555655553 23344333 344567899999998874 223346788
Q ss_pred cceeEe-EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 736 NSVEDL-QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 736 ~~V~~l-~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
..|.++ +|+|+|+ +||+|+ |++|+||++++++
T Consensus 400 ~~v~s~~~fspdg~-~lasg~-d~~i~iW~~~~gk 432 (435)
T 4e54_B 400 SGISSLNEFNPMGD-TLASAM-GYHILIWSQQEAR 432 (435)
T ss_dssp CCCCCEEEECTTSS-CEEEEC-SSEEEECCCC---
T ss_pred CcEEEEEEECCCCC-EEEEEc-CCcEEEEECCcCe
Confidence 899998 6999999 798876 8899999999886
No 55
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.3e-35 Score=322.59 Aligned_cols=323 Identities=20% Similarity=0.340 Sum_probs=268.9
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCce
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQL 247 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i 247 (812)
....+.||.+.|.. ++++ ++++||+|+.||.|+|||+.+++ ....+.+|...|.+++|+ +++|++++.|+.|
T Consensus 110 ~~~~l~~h~~~v~~-~~~~-~g~~l~sg~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i 181 (445)
T 2ovr_B 110 SPKVLKGHDDHVIT-CLQF-CGNRIVSGSDDNTLKVWSAVTGK----CLRTLVGHTGGVWSSQMR--DNIIISGSTDRTL 181 (445)
T ss_dssp CCEEEECSTTSCEE-EEEE-ETTEEEEEETTSCEEEEETTTCC----EEEECCCCSSCEEEEEEE--TTEEEEEETTSCE
T ss_pred eeEEecccCCCcEE-EEEE-cCCEEEEEECCCcEEEEECCCCc----EEEEEcCCCCCEEEEEec--CCEEEEEeCCCeE
Confidence 34556689987543 3556 78999999999999999999887 667888999999999998 6799999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
++||+.++ +++..+.+|...|.+++|++ ..|++|+.||+|++||+.++. ....+.+|...|.+++|
T Consensus 182 ~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~ 247 (445)
T 2ovr_B 182 KVWNAETG-------ECIHTLYGHTSTVRCMHLHE---KRVVSGSRDATLRVWDIETGQ----CLHVLMGHVAAVRCVQY 247 (445)
T ss_dssp EEEETTTT-------EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEESSSCC----EEEEEECCSSCEEEEEE
T ss_pred EEEECCcC-------cEEEEECCCCCcEEEEEecC---CEEEEEeCCCEEEEEECCCCc----EEEEEcCCcccEEEEEE
Confidence 99999885 77889999999999999964 689999999999999999887 56677889999999999
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
++. ++++|+.||.|++||+++ ..++..+ .+|...|.+++| ++.++++|+.||.|++||++ .++.+..+
T Consensus 248 --~~~-~l~~~~~dg~i~iwd~~~---~~~~~~~-~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~---~~~~~~~~ 315 (445)
T 2ovr_B 248 --DGR-RVVSGAYDFMVKVWDPET---ETCLHTL-QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVE---TGNCIHTL 315 (445)
T ss_dssp --CSS-CEEEEETTSCEEEEEGGG---TEEEEEE-CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETT---TCCEEEEE
T ss_pred --CCC-EEEEEcCCCEEEEEECCC---CcEeEEe-cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECC---CCCEEEEE
Confidence 455 599999999999999984 4456666 689999999999 68899999999999999998 57788999
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
.+|...+.++.+++ .+|++++.||.|++||+...+. ......
T Consensus 316 ~~~~~~v~~~~~~~---~~l~~~~~dg~i~vwd~~~~~~-----------------~~~~~~------------------ 357 (445)
T 2ovr_B 316 TGHQSLTSGMELKD---NILVSGNADSTVKIWDIKTGQC-----------------LQTLQG------------------ 357 (445)
T ss_dssp CCCCSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE-----------------EEEECS------------------
T ss_pred cCCcccEEEEEEeC---CEEEEEeCCCeEEEEECCCCcE-----------------EEEEcc------------------
Confidence 99999999998863 5899999999999999976521 000000
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
T Consensus 358 -------------------------------------------------------------------------------- 357 (445)
T 2ovr_B 358 -------------------------------------------------------------------------------- 357 (445)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
...|...|.+++|+ +++++++ +.||.|++||+.++.
T Consensus 358 ---------------~~~~~~~v~~~~~~--~~~l~s~--~~dg~v~iwd~~~~~------------------------- 393 (445)
T 2ovr_B 358 ---------------PNKHQSAVTCLQFN--KNFVITS--SDDGTVKLWDLKTGE------------------------- 393 (445)
T ss_dssp ---------------TTSCSSCEEEEEEC--SSEEEEE--ETTSEEEEEETTTCC-------------------------
T ss_pred ---------------CCCCCCCEEEEEEC--CCEEEEE--eCCCeEEEEECCCCc-------------------------
Confidence 01234467777774 5678888 899999999999876
Q ss_pred Ceeee-----cCCCCceEEEEeCCCCCCeEEecCCCce----EEEEecC
Q psy4510 648 PLFSF-----SGHLTEGFAMDWSSTEPGVLATGDCKRN----IHIWTPR 687 (812)
Q Consensus 648 ~~~~~-----~gh~~~V~~l~~sp~~~~~las~s~Dg~----v~iWd~~ 687 (812)
.+..+ .+|.+.|++++|+| ++.+||+|+.||+ |.+||+.
T Consensus 394 ~~~~~~~~~~~~~~~~v~~~~~s~-~~~~la~~~~dg~~~~~l~v~df~ 441 (445)
T 2ovr_B 394 FIRNLVTLESGGSGGVVWRIRASN-TKLVCAVGSRNGTEETKLLVLDFD 441 (445)
T ss_dssp EEEEEEECTTGGGTCEEEEEEECS-SEEEEEEECSSSSSCCEEEEEECC
T ss_pred eeeeeeccccCCCCceEEEEEecC-CEEEEEEcccCCCCccEEEEEECC
Confidence 44444 57889999999999 7889999999987 8888875
No 56
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=9.2e-36 Score=307.46 Aligned_cols=263 Identities=16% Similarity=0.240 Sum_probs=217.7
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCc
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQ 246 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~ 246 (812)
+..+.||.+.|++++|+| +|++||||+.|++|+||++..... .....+.+|..+|.+++|+++ +++|++++.|++
T Consensus 2 ~~~~~~h~~~V~~~~~s~-~g~~las~s~D~~v~iw~~~~~~~--~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~ 78 (297)
T 2pm7_B 2 VVIANAHNEMIHDAVMDY-YGKRMATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 78 (297)
T ss_dssp CEECCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEEBCSSCB--CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTE
T ss_pred ceeccCCcCceEEEEECC-CCCEEEEEeCCCEEEEEecCCCCc--EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCE
Confidence 344569999999999999 999999999999999999975421 156788999999999999864 899999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
|++||+.++ ....+..+.+|...|.+++|+|+ + .+|++|+.|++|++||+...... ....+.+|...|.+
T Consensus 79 v~iWd~~~~-----~~~~~~~~~~h~~~v~~v~~~p~~~g-~~l~s~s~d~~v~~wd~~~~~~~--~~~~~~~h~~~v~~ 150 (297)
T 2pm7_B 79 VMIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PMLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNS 150 (297)
T ss_dssp EEEEEBSSS-----CBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEEBCSSSCB--CCEEEECCSSCEEE
T ss_pred EEEEEcCCC-----ceEEEEEeecCCCceeEEEeCcCCCC-cEEEEEECCCcEEEEEecCCCce--eeeeeecccCccce
Confidence 999999875 23567788999999999999997 5 79999999999999999876421 13456789999999
Q ss_pred EEEcCCC------------CeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCCC---CEEEEEeCCC
Q psy4510 325 LQWSPGE------------KRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRTE---PLIVSGGDDG 388 (812)
Q Consensus 325 ~~~~p~~------------~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~dg 388 (812)
++|+|++ ..+|++|+.|++|++||++...... ....+ .+|...|++++|+|++ ++|++|+.|+
T Consensus 151 ~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l-~~H~~~V~~v~~sp~~~~~~~las~s~D~ 229 (297)
T 2pm7_B 151 ASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYMASVSQDR 229 (297)
T ss_dssp EEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEETTS
T ss_pred EeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe-cCCCCceEEEEECCCCCCceEEEEEECCC
Confidence 9999973 2379999999999999998543221 33445 7899999999999985 6999999999
Q ss_pred cEEEEecCCCCCCCceEEc--ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKGSSVATF--KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|+|||++..........+ ..|...|.+++|+|++ .+|++++.|+.|++|+....
T Consensus 230 ~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~las~~~D~~v~lw~~~~~ 286 (297)
T 2pm7_B 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (297)
T ss_dssp CEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEETTSCEEEEEECTT
T ss_pred cEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC-CEEEEEcCCCcEEEEEECCC
Confidence 9999999752211122333 5688999999999997 68999999999999998644
No 57
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.2e-35 Score=319.45 Aligned_cols=307 Identities=17% Similarity=0.183 Sum_probs=242.1
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.....+.+|...|.+++|+|+++.+|++|+.||.|++||+.++... ......+|...|.+++|+|++..+|++++.|+
T Consensus 64 ~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~ 141 (383)
T 3ei3_B 64 KLHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKT--SFIQGMGPGDAITGMKFNQFNTNQLFVSSIRG 141 (383)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCE--EEECCCSTTCBEEEEEEETTEEEEEEEEETTT
T ss_pred ceEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccc--eeeecCCcCCceeEEEeCCCCCCEEEEEeCCC
Confidence 5567788999999999999998679999999999999999977631 12233479999999999995444799999999
Q ss_pred eEEEEECCCCCcccceeec--CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEc
Q psy4510 343 SIRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWH 420 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~ 420 (812)
.|++||++. ..+..+ ...|...|.+++|+|++++|++|+.||.|++||++ +.++..+..|...|.+++|+
T Consensus 142 ~i~iwd~~~----~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~----~~~~~~~~~h~~~v~~~~~~ 213 (383)
T 3ei3_B 142 ATTLRDFSG----SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD----GHEIFKEKLHKAKVTHAEFN 213 (383)
T ss_dssp EEEEEETTS----CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT----SCEEEEEECSSSCEEEEEEC
T ss_pred EEEEEECCC----CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC----CCEEEEeccCCCcEEEEEEC
Confidence 999999984 222222 24456889999999999999999999999999994 56888999999999999999
Q ss_pred cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 421 PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 421 p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
|++..+|++++.|+.|++||++..... .
T Consensus 214 ~~~~~~l~s~~~d~~i~iwd~~~~~~~------------------------------------~---------------- 241 (383)
T 3ei3_B 214 PRCDWLMATSSVDATVKLWDLRNIKDK------------------------------------N---------------- 241 (383)
T ss_dssp SSCTTEEEEEETTSEEEEEEGGGCCST------------------------------------T----------------
T ss_pred CCCCCEEEEEeCCCEEEEEeCCCCCcc------------------------------------c----------------
Confidence 998659999999999999999765210 0
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccc
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMN 580 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (812)
. .
T Consensus 242 ----------------------------~--------------------------------------------------~ 243 (383)
T 3ei3_B 242 ----------------------------S--------------------------------------------------Y 243 (383)
T ss_dssp ----------------------------C--------------------------------------------------E
T ss_pred ----------------------------c--------------------------------------------------e
Confidence 0 0
Q ss_pred eEEecccceEEEEEEec-cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec------
Q psy4510 581 SYFIRHRGCINRVRTCQ-YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS------ 653 (812)
Q Consensus 581 ~~~~~h~~~v~~l~~s~-~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 653 (812)
....+|...|.+++|+| ++++++++ +.||.|++||+.+... +..+.
T Consensus 244 ~~~~~~~~~v~~~~~s~~~~~~l~~~--~~d~~i~iwd~~~~~~-------------------------~~~~~~~~~~~ 296 (383)
T 3ei3_B 244 IAEMPHEKPVNAAYFNPTDSTKLLTT--DQRNEIRVYSSYDWSK-------------------------PDQIIIHPHRQ 296 (383)
T ss_dssp EEEEECSSCEEEEEECTTTSCEEEEE--ESSSEEEEEETTBTTS-------------------------CSEEEECCBCC
T ss_pred EEEecCCCceEEEEEcCCCCCEEEEE--cCCCcEEEEECCCCcc-------------------------ccccccccccc
Confidence 01113556889999999 99999998 8899999999988752 22222
Q ss_pred -CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccccc
Q psy4510 654 -GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 732 (812)
Q Consensus 654 -gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~ 732 (812)
.|...+. ++|+| ++..++ ++++|++++ +|+.|+.|++||+.+++ ++..+.
T Consensus 297 ~~~~~~~~-~~~~p-~~~~~~---------------------~~~s~dg~~--s~s~d~~i~iwd~~~~~----~~~~l~ 347 (383)
T 3ei3_B 297 FQHLTPIK-ATWHP-MYDLIV---------------------AGRYPDDQL--LLNDKRTIDIYDANSGG----LVHQLR 347 (383)
T ss_dssp CTTSCCCC-CEECS-SSSEEE---------------------EECBCCTTT--CTTCCCCEEEEETTTCC----EEEEEC
T ss_pred cccccceE-EeccC-CCCceE---------------------EEecCCccc--ccCCCCeEEEEecCCCc----eeeeec
Confidence 3444444 47777 443333 235777877 88889999999988887 455666
Q ss_pred C--CCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 733 G--HTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 733 g--H~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+ |...+.+++|+|+|+ +|++|+ |++|+|||+++
T Consensus 348 ~~~~~~~~~~~~~s~~g~-~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 348 DPNAAGIISLNKFSPTGD-VLASGM-GFNILIWNRED 382 (383)
T ss_dssp BTTBCSCCCEEEECTTSS-EEEEEE-TTEEEEEECC-
T ss_pred CCCCCceEEEEEEecCcc-EEEEec-CCcEEEEecCC
Confidence 6 567788889999999 899997 99999999875
No 58
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=100.00 E-value=3.4e-35 Score=322.52 Aligned_cols=326 Identities=20% Similarity=0.312 Sum_probs=261.5
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|.+.|.. ++++++++|++|+.||.|++||+.++ +.+..+.+|.+.|.+++|++ .+|++|+.||
T Consensus 111 ~~~l~~h~~~v~~-~~~~~g~~l~sg~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~---~~l~s~~~dg 179 (445)
T 2ovr_B 111 PKVLKGHDDHVIT-CLQFCGNRIVSGSDDNTLKVWSAVTG-------KCLRTLVGHTGGVWSSQMRD---NIIISGSTDR 179 (445)
T ss_dssp CEEEECSTTSCEE-EEEEETTEEEEEETTSCEEEEETTTC-------CEEEECCCCSSCEEEEEEET---TEEEEEETTS
T ss_pred eEEecccCCCcEE-EEEEcCCEEEEEECCCcEEEEECCCC-------cEEEEEcCCCCCEEEEEecC---CEEEEEeCCC
Confidence 4567889987643 24456899999999999999999885 77889999999999999983 6999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|++||+.++. ....+.+|...|.+++|++ + .+++|+.||.|++||+++ ..++..+ ..|...|.+++|
T Consensus 180 ~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~--~-~l~s~s~dg~i~~wd~~~---~~~~~~~-~~~~~~v~~~~~- 247 (445)
T 2ovr_B 180 TLKVWNAETGE----CIHTLYGHTSTVRCMHLHE--K-RVVSGSRDATLRVWDIET---GQCLHVL-MGHVAAVRCVQY- 247 (445)
T ss_dssp CEEEEETTTTE----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEESSS---CCEEEEE-ECCSSCEEEEEE-
T ss_pred eEEEEECCcCc----EEEEECCCCCcEEEEEecC--C-EEEEEeCCCEEEEEECCC---CcEEEEE-cCCcccEEEEEE-
Confidence 99999999886 5677889999999999963 4 699999999999999984 4445555 689999999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
+++++++|+.||.|++||++ .+..+..+.+|...|.++.| ++ .++++++.|+.|++||+.+.+.
T Consensus 248 -~~~~l~~~~~dg~i~iwd~~---~~~~~~~~~~~~~~v~~~~~--~~-~~l~~~~~d~~i~i~d~~~~~~--------- 311 (445)
T 2ovr_B 248 -DGRRVVSGAYDFMVKVWDPE---TETCLHTLQGHTNRVYSLQF--DG-IHVVSGSLDTSIRVWDVETGNC--------- 311 (445)
T ss_dssp -CSSCEEEEETTSCEEEEEGG---GTEEEEEECCCSSCEEEEEE--CS-SEEEEEETTSCEEEEETTTCCE---------
T ss_pred -CCCEEEEEcCCCEEEEEECC---CCcEeEEecCCCCceEEEEE--CC-CEEEEEeCCCeEEEEECCCCCE---------
Confidence 67899999999999999998 46788899999999999999 33 6899999999999999976521
Q ss_pred hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
..
T Consensus 312 --------~~---------------------------------------------------------------------- 313 (445)
T 2ovr_B 312 --------IH---------------------------------------------------------------------- 313 (445)
T ss_dssp --------EE----------------------------------------------------------------------
T ss_pred --------EE----------------------------------------------------------------------
Confidence 00
Q ss_pred CCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEE
Q psy4510 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGI 615 (812)
Q Consensus 536 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~i 615 (812)
.+.+|...+.++.+ ++++++++ +.||.|++
T Consensus 314 ----------------------------------------------~~~~~~~~v~~~~~--~~~~l~~~--~~dg~i~v 343 (445)
T 2ovr_B 314 ----------------------------------------------TLTGHQSLTSGMEL--KDNILVSG--NADSTVKI 343 (445)
T ss_dssp ----------------------------------------------EECCCCSCEEEEEE--ETTEEEEE--ETTSCEEE
T ss_pred ----------------------------------------------EEcCCcccEEEEEE--eCCEEEEE--eCCCeEEE
Confidence 01112223444443 46678888 89999999
Q ss_pred EeccccccccCCcccccccccccCCCCCCCCCCeeeecC---CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCcee
Q psy4510 616 WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG---HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 692 (812)
Q Consensus 616 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~ 692 (812)
||+.++. ++..+.+ |...|++++|++ .+|++++.||.|++||+.+++..
T Consensus 344 wd~~~~~-------------------------~~~~~~~~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iwd~~~~~~~ 395 (445)
T 2ovr_B 344 WDIKTGQ-------------------------CLQTLQGPNKHQSAVTCLQFNK---NFVITSSDDGTVKLWDLKTGEFI 395 (445)
T ss_dssp EETTTCC-------------------------EEEEECSTTSCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEE
T ss_pred EECCCCc-------------------------EEEEEccCCCCCCCEEEEEECC---CEEEEEeCCCeEEEEECCCCcee
Confidence 9998876 5666665 888999999965 47888888877777777654433
Q ss_pred EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCc----eEEeeecCc
Q psy4510 693 SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS----NRIGARRDM 768 (812)
Q Consensus 693 ~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~----i~iWd~~~~ 768 (812)
.... .....+|.+.|++++|+|++. +||+|+.||+ |.|||++..
T Consensus 396 ~~~~-------------------------------~~~~~~~~~~v~~~~~s~~~~-~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 396 RNLV-------------------------------TLESGGSGGVVWRIRASNTKL-VCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEE-------------------------------ECTTGGGTCEEEEEEECSSEE-EEEEECSSSSSCCEEEEEECCCC
T ss_pred eeee-------------------------------ccccCCCCceEEEEEecCCEE-EEEEcccCCCCccEEEEEECCCC
Confidence 3221 001246788999999999999 8999999998 999999864
No 59
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-36 Score=324.69 Aligned_cols=322 Identities=13% Similarity=0.129 Sum_probs=252.4
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.-..+|.+++|||||+++|+++.|++|+ +...+ ..+.+|...|++++|+|+| .++.+.+|
T Consensus 13 ~~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~----------~~l~gh~~~v~~V~FsPdg--------~~~~~~~~ 72 (588)
T 2j04_A 13 EFEDWKNNLTWARDGTLYLTTFPDISIG--QPKYA----------KDINCNSKNLFHVKEFPLE--------FENKLDFE 72 (588)
T ss_dssp CCSSSSCCEEECTTSCEEEECSSSEEEE--EECCC----------SCCSSBGGGTEEEEEECCC--------CCCTTTTS
T ss_pred HhhccEEEEEECCCCCEEEEEcCCceee--ccccc----------ceecCCCccEEEEEECCCC--------CcceEEEE
Confidence 4458999999999999999999999999 64432 2347999999999999997 45666666
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCC-----CeEEEEEc
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTS-----DVNVISWN 375 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~-----~v~~l~~~ 375 (812)
+..... ...+ .|...|.+++|+|+|. .||+++.||.|++||... ++..+ . |.. .|.+++|+
T Consensus 73 ~~~~~~-----~~~~-~~~~~V~~vawSPdG~-~LAs~s~dg~V~iwd~~~-----~l~~l-~-~~~~~~~~sv~svafS 138 (588)
T 2j04_A 73 LAQQNG-----LLNS-QPVCYPRVCKPSPIDD-WMAVLSNNGNVSVFKDNK-----MLTNL-D-SKGNLSSRTYHCFEWN 138 (588)
T ss_dssp CCCSSC-----SSTT-SCSCCEEEEEECSSSS-CEEEEETTSCEEEEETTE-----EEEEC-C-CSSCSTTTCEEEEEEC
T ss_pred eCCCce-----Eeec-CCCCcEEEEEECCCCC-EEEEEeCCCcEEEEeCCc-----eeeec-c-CCCccccccEEEEEEc
Confidence 543222 2222 4588999999999999 599999999999999642 44444 4 554 59999999
Q ss_pred CCCCEEEEEeCCCcEEEEecCCCCCCC----ceEEc----ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 376 RTEPLIVSGGDDGCIHVWDLRRFKKGS----SVATF----KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 376 ~~~~~l~sg~~dg~i~iwd~~~~~~~~----~~~~~----~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
|+|++||+|+.||+|+|||+....... .+.++ .+|...|.+++|+|++ +++++.|+.|++||+......
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg---Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV---LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE---EEEEETTCCEEEECCCSSSSC
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc---EEEEeCCCeEEEEECCCCccc
Confidence 999999999999999999998521111 25665 6788899999999985 888999999999998765210
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLP 527 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~ 527 (812)
T Consensus 216 -------------------------------------------------------------------------------- 215 (588)
T 2j04_A 216 -------------------------------------------------------------------------------- 215 (588)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEE-ecccceEEEEEEeccCCeEEEEe
Q psy4510 528 GTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYF-IRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 528 ~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
.....+ .+|...|.+++|+ |+.++++
T Consensus 216 --------------------------------------------------~~~~tL~~~h~~~V~svaFs--g~~LASa- 242 (588)
T 2j04_A 216 --------------------------------------------------PVSRMIQNASRRKITDLKIV--DYKVVLT- 242 (588)
T ss_dssp --------------------------------------------------CCEEEEECCCSSCCCCEEEE--TTEEEEE-
T ss_pred --------------------------------------------------cceeeecccccCcEEEEEEE--CCEEEEE-
Confidence 000112 2455678888998 6788887
Q ss_pred ecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEe--CCCCCCeEEecCCCceEEEE
Q psy4510 607 WGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW--SSTEPGVLATGDCKRNIHIW 684 (812)
Q Consensus 607 ~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~--sp~~~~~las~s~Dg~v~iW 684 (812)
+ +++|++|++.++. ......||.+.|.+++| +| ++..|++++.||+ ++|
T Consensus 243 -~-~~tIkLWd~~~~~-------------------------~~~~~~gh~~~V~~va~~~s~-d~~~La~a~edG~-klw 293 (588)
T 2j04_A 243 -C-PGYVHKIDLKNYS-------------------------ISSLKTGSLENFHIIPLNHEK-ESTILLMSNKTSY-KVL 293 (588)
T ss_dssp -C-SSEEEEEETTTTE-------------------------EEEEECSCCSCCCEEEETTCS-SCEEEEECSSCEE-EEE
T ss_pred -e-CCeEEEEECCCCe-------------------------EEEEEcCCCceEEEEEeeeCC-CCCEEEEEcCCCC-EEE
Confidence 4 6999999999876 22223389999999999 99 7889999999999 999
Q ss_pred ecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeecc
Q psy4510 685 TPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV 756 (812)
Q Consensus 685 d~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~ 756 (812)
.... ..++||+..+|+. |+++++|+...+. ...+.+ ...|.+++|||||+ +||+++.
T Consensus 294 ~~d~------~~~spd~~l~a~~--d~~v~lW~~~g~~-----l~~~~~-~~~I~~va~SPdG~-~lA~~~~ 350 (588)
T 2j04_A 294 LEDE------LHVTADNIIAPYL--EKKFKKWSTIWNE-----FNNYET-TLVIHGISLSPDGY-SIAIVYD 350 (588)
T ss_dssp ESSS------EEEECCCSSHHHH--HHHHHHTTTTTTS-----SSSSCC-EEEEEEEEECTTSS-EEEEEEE
T ss_pred eecc------EEECCCceEEEEc--CCEEEEEECCCCc-----eeeecc-ceEEEEEEECCCCC-EEEEEEe
Confidence 9882 3489999999886 9999999975543 345555 78899999999999 7998873
No 60
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.1e-36 Score=330.13 Aligned_cols=376 Identities=12% Similarity=0.118 Sum_probs=261.0
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCccccccccc-CCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~ 260 (812)
.|+| ++..+++++ .|+... + ....+ .+|.+.|++++|+| ++++|++|+.|+.|++|++.+.....
T Consensus 34 ~f~~-~~~~~~~~~------~w~~~g-~----~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~- 100 (437)
T 3gre_A 34 EFGP-IQEIVRSPN------MGNLRG-K----LIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE- 100 (437)
T ss_dssp GGCC-CCCCCCCCC------GGGCCC-C----EEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC-
T ss_pred hcCC-ccccccccc------cccccc-e----EEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc-
Confidence 4778 888888776 377443 2 45556 89999999999999 99999999999999999987611000
Q ss_pred CCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC---CCCccee------ccccccC--CCCCEEEEE--E
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR---EAGAWQV------DQKPLVG--HTNSVEDLQ--W 327 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~---~~~~~~~------~~~~~~~--h~~~v~~~~--~ 327 (812)
..++...+ +|.+.|.+++|+|++ .+|++|+.||.|++||+. .+..... ....+.. +...+.++. +
T Consensus 101 ~~~~~~~~-~h~~~v~~~~~~~~~-~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 178 (437)
T 3gre_A 101 VYSSSLTY-DCSSTVTQITMIPNF-DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFV 178 (437)
T ss_dssp CCSCSEEE-ECSSCEEEEEECTTS-SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEE
T ss_pred ccceeeec-cCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEE
Confidence 12334444 599999999999988 899999999999999995 3321100 0111112 566777777 5
Q ss_pred cCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc--CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA--HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~--~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
++++. +|++++.||.|++||+++ ..++..+ .. |...|++++|+|++++|++|+.||.|++||++ .+.++.
T Consensus 179 ~~~~~-~l~~~~~d~~i~iwd~~~---~~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~---~~~~~~ 250 (437)
T 3gre_A 179 NEEKS-LLVALTNLSRVIIFDIRT---LERLQII-ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIR---FNVLIR 250 (437)
T ss_dssp CSSCE-EEEEEETTSEEEEEETTT---CCEEEEE-ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETT---TTEEEE
T ss_pred cCCCC-EEEEEeCCCeEEEEeCCC---CeeeEEE-ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcC---CccEEE
Confidence 67777 799999999999999984 4445555 34 88999999999999999999999999999998 467777
Q ss_pred Ecc-cCCCCEEEEEEccC---CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCC
Q psy4510 406 TFK-HHTAPVTTVEWHPT---ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQ 481 (812)
Q Consensus 406 ~~~-~h~~~v~~v~~~p~---~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 481 (812)
.+. .|..+|++++|+|. +..+|++++.|+.|++||+...+. +.....+..
T Consensus 251 ~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~----------------~~~~~~~~~---------- 304 (437)
T 3gre_A 251 SWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHC----------------QYAFINSDE---------- 304 (437)
T ss_dssp EEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEE----------------EEEEESSSS----------
T ss_pred EEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcE----------------EEEEEcCCC----------
Confidence 775 78889999977763 235999999999999999987631 111111111
Q ss_pred CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccc
Q psy4510 482 LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELE 561 (812)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 561 (812)
.+..+.|+|+...+
T Consensus 305 ----------------------------------~~~~~~~~~~~~~l-------------------------------- 318 (437)
T 3gre_A 305 ----------------------------------QPSMEHFLPIEKGL-------------------------------- 318 (437)
T ss_dssp ----------------------------------CCCGGGGSCBCSSG--------------------------------
T ss_pred ----------------------------------CCccceeccccccc--------------------------------
Confidence 22222333331100
Q ss_pred cccCCCCCCccccCCCccceEEe--cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 562 DDESEGSGDEDRRKDPVMNSYFI--RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
....+. .|...|.+++|+ ++++|+++ +.||.|++||+.++.
T Consensus 319 -----------------~~~~~~~~~~~~~v~~l~~~-~~~~l~s~--~~d~~i~~wd~~~~~----------------- 361 (437)
T 3gre_A 319 -----------------EELNFCGIRSLNALSTISVS-NDKILLTD--EATSSIVMFSLNELS----------------- 361 (437)
T ss_dssp -----------------GGCCCCCCCSGGGGCCEEEE-TTEEEEEE--GGGTEEEEEETTCGG-----------------
T ss_pred -----------------ccceecccccCCceEEEEEC-CceEEEec--CCCCeEEEEECCCcc-----------------
Confidence 000122 377889999999 77888888 899999999999886
Q ss_pred CCCCCCCCCeeeecCCCC---ceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEe
Q psy4510 640 KGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIW 716 (812)
Q Consensus 640 ~~~~~~~~~~~~~~gh~~---~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iw 716 (812)
++..+.+|.. ......+++ ...+++.. |
T Consensus 362 --------~~~~~~~~~~~~~~~~~~~~~~---------------------------------~~~~~~~~--------~ 392 (437)
T 3gre_A 362 --------SSKAVISPSRFSDVFIPTQVTA---------------------------------NLTMLLRK--------M 392 (437)
T ss_dssp --------GCEEEECC--CCCEEEEEEEET---------------------------------TEEEEEEE--------C
T ss_pred --------cceEEecccccCceEEEEEeec---------------------------------ceEEEEEe--------c
Confidence 5666777643 233333333 12222222 2
Q ss_pred ecCCCCCcccccccccCCCcceeEeEEecC--CceeEEeeccCCceEEee
Q psy4510 717 TPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 717 d~~~~~~~~~~~~~~~gH~~~V~~l~fs~d--g~~~L~s~s~Dg~i~iWd 764 (812)
+..... ....+..|.+.|++++|+++ +. +|+||+.||+|+||+
T Consensus 393 ~~~~~~----~~~~~~~h~~~I~~i~~~~~~~~~-~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 393 KRTSTH----SVDDSLYHHDIINSISTCEVDETP-LLVACDNSGLIGIFQ 437 (437)
T ss_dssp C-----------------CCCEEEEEEEESSSSE-EEEEEETTSCEEEEC
T ss_pred cccccc----ccCcccccccceeeEeeeccCCce-EEEEEcCCceEEEeC
Confidence 222222 23456779999999999998 66 899999999999995
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=3.9e-35 Score=340.64 Aligned_cols=256 Identities=20% Similarity=0.321 Sum_probs=216.7
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
..+.+|.+.|++++|+|.++++||||+.||+|+||++.+.... ......+.+|...|.+++|+|++++|++|+.|+.|+
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~ 455 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELR 455 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEE
Confidence 3567999999999999956789999999999999999875432 224567889999999999999999999999999999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+||+.++ ..+..+.+|...|.+++|+|++ .+|++|+.|++|++||+..... ........+|...|.+++|+
T Consensus 456 vwd~~~~-------~~~~~~~~h~~~v~~~~~s~~~-~~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 456 LWDLAAG-------VSTRRFVGHTKDVLSVAFSLDN-RQIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEETTTT-------EEEEEEECCSSCEEEEEECTTS-SCEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEEC
T ss_pred EEECCCC-------cceeEEeCCCCCEEEEEEeCCC-CEEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEe
Confidence 9999885 6778899999999999999998 7999999999999999865432 11233446799999999999
Q ss_pred CCCC-eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 329 PGEK-RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 329 p~~~-~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
|++. .+|++|+.|++|++||++. ..+...+ .+|...|++++|+|++++|++|+.||.|++||++ .++.+..+
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~---~~~~~~~-~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~---~~~~~~~~ 599 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSN---CKLRSTL-AGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLA---EGKKLYSL 599 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTT---CCEEEEE-CCCSSCEEEEEECTTSSEEEEEETTSBCEEEETT---TTEEEECC
T ss_pred CCCCcceEEEEeCCCeEEEEECCC---CcEEEEE-cCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECC---CCceEEEe
Confidence 9873 3799999999999999984 3445555 7899999999999999999999999999999998 45666666
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
. +...|.+++|+|++ .+|++++ ++.|++||+...
T Consensus 600 ~-~~~~v~~~~~sp~~-~~l~~~~-~~~i~iwd~~~~ 633 (694)
T 3dm0_A 600 E-ANSVIHALCFSPNR-YWLCAAT-EHGIKIWDLESK 633 (694)
T ss_dssp B-CSSCEEEEEECSSS-SEEEEEE-TTEEEEEETTTT
T ss_pred c-CCCcEEEEEEcCCC-cEEEEEc-CCCEEEEECCCC
Confidence 5 45689999999986 4666555 667999999876
No 62
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=1.5e-34 Score=319.42 Aligned_cols=317 Identities=20% Similarity=0.352 Sum_probs=259.5
Q ss_pred CCceEEcCCCCcE-EEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 263 PPLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 263 ~~~~~~~~h~~~v-~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.+...+.+|...+ .++.++ + .+|++|+.||+|++||+.++. ....+.+|.+.|.+++|+|++ +|++|+.|
T Consensus 112 ~~~~~l~~h~~~v~~~~~~~--~-~~l~sgs~dg~i~vwd~~~~~----~~~~~~~h~~~V~~l~~~~~~--~l~s~s~d 182 (464)
T 3v7d_B 112 PQRTTLRGHMTSVITCLQFE--D-NYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHGG--ILVSGSTD 182 (464)
T ss_dssp CEEEEEECCSSSCEEEEEEE--T-TEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSTT--EEEEEETT
T ss_pred cceEEEcCCCCCcEEEEEEC--C-CEEEEEcCCCcEEEEECCCCc----EEEEEeCCCcCEEEEEEcCCC--EEEEEeCC
Confidence 4556889999875 666664 4 699999999999999999886 567788999999999999987 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEc--CCCCEEEEEeCCCcEEEEecCCCCCCC-----------------
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN--RTEPLIVSGGDDGCIHVWDLRRFKKGS----------------- 402 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~--~~~~~l~sg~~dg~i~iwd~~~~~~~~----------------- 402 (812)
|+|++||+++ ..++..+ .+|...|.+++|+ ++++++++|+.||.|++||++......
T Consensus 183 g~i~vwd~~~---~~~~~~~-~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 183 RTVRVWDIKK---GCCTHVF-EGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp SCEEEEETTT---TEEEEEE-CCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred CCEEEEECCC---CcEEEEE-CCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 9999999984 4455666 7899999999998 567799999999999999998532111
Q ss_pred ---ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc
Q psy4510 403 ---SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479 (812)
Q Consensus 403 ---~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 479 (812)
.+..+.+|...|.++. +++ .+|++++.|+.|++||+.+.+ .
T Consensus 259 ~~~~~~~~~~~~~~v~~~~--~~~-~~l~~~~~d~~i~vwd~~~~~-----------------~---------------- 302 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRTVS--GHG-NIVVSGSYDNTLIVWDVAQMK-----------------C---------------- 302 (464)
T ss_dssp CTTEEEEECCCSSCEEEEE--EET-TEEEEEETTSCEEEEETTTTE-----------------E----------------
T ss_pred CeEEEEEccCccceEEEEc--CCC-CEEEEEeCCCeEEEEECCCCc-----------------E----------------
Confidence 2567788999998885 444 589999999999999987551 0
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 480 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
T Consensus 303 -------------------------------------------------------------------------------- 302 (464)
T 3v7d_B 303 -------------------------------------------------------------------------------- 302 (464)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
...+.+|...|.+++|+|++++++++ +.||.|++||+.++.
T Consensus 303 --------------------~~~~~~~~~~v~~~~~~~~~~~l~sg--~~dg~i~vwd~~~~~----------------- 343 (464)
T 3v7d_B 303 --------------------LYILSGHTDRIYSTIYDHERKRCISA--SMDTTIRIWDLENGE----------------- 343 (464)
T ss_dssp --------------------EEEECCCSSCEEEEEEETTTTEEEEE--ETTSCEEEEETTTTE-----------------
T ss_pred --------------------EEEecCCCCCEEEEEEcCCCCEEEEE--eCCCcEEEEECCCCc-----------------
Confidence 00123345578899999999999998 899999999999876
Q ss_pred CCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------eEEEEecCCCCEEEeecCC
Q psy4510 640 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------WSVYLYTNRFGVLATGDCK 710 (812)
Q Consensus 640 ~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------~~~~~~s~dg~~lasgs~d 710 (812)
++..+.+|...|.+++|++ .+|++++.||+|++||+.++.. ....++++++++|++|+ |
T Consensus 344 --------~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-d 411 (464)
T 3v7d_B 344 --------LMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGS-E 411 (464)
T ss_dssp --------EEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECSSEEEEEE-T
T ss_pred --------EEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCCCEEEEec-C
Confidence 7888999999999999975 5999999999999999998433 34567899999999999 8
Q ss_pred CeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 711 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 711 g~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
|.|++||+.+++. +...+.+|...|++++|+ +++++++++.||.+.+|-
T Consensus 412 g~i~iwd~~~g~~---~~~~~~~~~~~v~~v~~~--~~~l~~~~~~~g~~~i~~ 460 (464)
T 3v7d_B 412 NQFNIYNLRSGKL---VHANILKDADQIWSVNFK--GKTLVAAVEKDGQSFLEI 460 (464)
T ss_dssp TEEEEEETTTCCE---EESCTTTTCSEEEEEEEE--TTEEEEEEEETTEEEEEE
T ss_pred CeEEEEECCCCcE---EehhhccCCCcEEEEEec--CCEEEEEEEeCCeEEEEE
Confidence 9999999999884 333478899999999997 443677777787665553
No 63
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=100.00 E-value=7.2e-35 Score=322.01 Aligned_cols=248 Identities=22% Similarity=0.324 Sum_probs=213.0
Q ss_pred CccCcCCCCCce-EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 168 PLFSFSGHLTEG-FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 168 ~i~~~~gh~~~i-~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
....+.||.+.| .++.+ ++++||+|+.||+|++||+.+++ ....+.+|...|.+++|++++ +|++++.|+.
T Consensus 113 ~~~~l~~h~~~v~~~~~~---~~~~l~sgs~dg~i~vwd~~~~~----~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~ 184 (464)
T 3v7d_B 113 QRTTLRGHMTSVITCLQF---EDNYVITGADDKMIRVYDSINKK----FLLQLSGHDGGVWALKYAHGG-ILVSGSTDRT 184 (464)
T ss_dssp EEEEEECCSSSCEEEEEE---ETTEEEEEETTSCEEEEETTTTE----EEEEECCCSSCEEEEEECSTT-EEEEEETTSC
T ss_pred ceEEEcCCCCCcEEEEEE---CCCEEEEEcCCCcEEEEECCCCc----EEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCC
Confidence 344566898885 55555 56799999999999999998876 667788999999999999988 8999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCccee--------------
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQV-------------- 310 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~~~-------------- 310 (812)
|++||+.++ +++..+.+|.+.|.+++|++ ++ .+|++|+.||+|++||+.+......
T Consensus 185 i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~~~~~-~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~ 256 (464)
T 3v7d_B 185 VRVWDIKKG-------CCTHVFEGHNSTVRCLDIVEYKNI-KYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTP 256 (464)
T ss_dssp EEEEETTTT-------EEEEEECCCSSCEEEEEEEESSSC-EEEEEEETTSCEEEEECCCCCCC------CCSSEEESCG
T ss_pred EEEEECCCC-------cEEEEECCCCCccEEEEEecCCCC-CEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeecc
Confidence 999999885 77889999999999999995 54 7899999999999999987653111
Q ss_pred -----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 311 -----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 311 -----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
....+.+|...|.++ ++++. ++++++.||.|++||+++ ..++..+ .+|...|.+++|+|+++++++|+
T Consensus 257 ~~~~~~~~~~~~~~~~v~~~--~~~~~-~l~~~~~d~~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~~~~~~l~sg~ 329 (464)
T 3v7d_B 257 EENPYFVGVLRGHMASVRTV--SGHGN-IVVSGSYDNTLIVWDVAQ---MKCLYIL-SGHTDRIYSTIYDHERKRCISAS 329 (464)
T ss_dssp GGCTTEEEEECCCSSCEEEE--EEETT-EEEEEETTSCEEEEETTT---TEEEEEE-CCCSSCEEEEEEETTTTEEEEEE
T ss_pred CCCeEEEEEccCccceEEEE--cCCCC-EEEEEeCCCeEEEEECCC---CcEEEEe-cCCCCCEEEEEEcCCCCEEEEEe
Confidence 133567888888887 45666 699999999999999984 4556666 78999999999999999999999
Q ss_pred CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.||.|++||++ .++.+..+.+|...|.++.|++ .+|++++.||.|++||+...
T Consensus 330 ~dg~i~vwd~~---~~~~~~~~~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~ 382 (464)
T 3v7d_B 330 MDTTIRIWDLE---NGELMYTLQGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDY 382 (464)
T ss_dssp TTSCEEEEETT---TTEEEEEECCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTC
T ss_pred CCCcEEEEECC---CCcEEEEEeCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCC
Confidence 99999999998 5778999999999999999984 58999999999999998765
No 64
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=2.2e-34 Score=307.60 Aligned_cols=311 Identities=14% Similarity=0.179 Sum_probs=252.0
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.....+.+|.+.|.+++|+|++ .+|++|+.||.|++||+.++. ....+.+|...|.+++|+|+++ +|++++.||
T Consensus 23 ~~~~~l~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~----~~~~~~~h~~~v~~~~~~~~~~-~l~s~~~dg 96 (369)
T 3zwl_B 23 MKAIKLTGHERPLTQVKYNKEG-DLLFSCSKDSSASVWYSLNGE----RLGTLDGHTGTIWSIDVDCFTK-YCVTGSADY 96 (369)
T ss_dssp EEEEEEECCSSCEEEEEECTTS-CEEEEEESSSCEEEEETTTCC----EEEEECCCSSCEEEEEECTTSS-EEEEEETTT
T ss_pred cccEEEEEeeceEEEEEEcCCC-CEEEEEeCCCEEEEEeCCCch----hhhhhhhcCCcEEEEEEcCCCC-EEEEEeCCC
Confidence 3446689999999999999998 799999999999999999887 5677889999999999999998 699999999
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCC--------CceEEccc
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKG--------SSVATFKH 409 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~--------~~~~~~~~ 409 (812)
.|++||+++ ..++..+ .+...|.+++|+|++++|++++.+ |.|++||++..... ..+..+..
T Consensus 97 ~i~iwd~~~---~~~~~~~--~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 171 (369)
T 3zwl_B 97 SIKLWDVSN---GQCVATW--KSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT 171 (369)
T ss_dssp EEEEEETTT---CCEEEEE--ECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC
T ss_pred eEEEEECCC---CcEEEEe--ecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC
Confidence 999999984 4445555 278899999999999999999999 99999999853221 24455566
Q ss_pred CCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 410 HTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 410 h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
|.. .+.+++|+|++ .+|++++.||.|++||+..... .
T Consensus 172 ~~~~~~~~~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~----------------~------------------------ 210 (369)
T 3zwl_B 172 HEGLDAATVAGWSTKG-KYIIAGHKDGKISKYDVSNNYE----------------Y------------------------ 210 (369)
T ss_dssp CTTCCCEEEEEECGGG-CEEEEEETTSEEEEEETTTTTE----------------E------------------------
T ss_pred CcCccceeEEEEcCCC-CEEEEEcCCCEEEEEECCCCcE----------------e------------------------
Confidence 666 99999999987 6999999999999999875310 0
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
T Consensus 211 -------------------------------------------------------------------------------- 210 (369)
T 3zwl_B 211 -------------------------------------------------------------------------------- 210 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
...+..|...|.+++|+|++++++++ +.||.|++||+.+..
T Consensus 211 ------------~~~~~~~~~~v~~~~~~~~~~~l~~~--~~d~~i~v~d~~~~~------------------------- 251 (369)
T 3zwl_B 211 ------------VDSIDLHEKSISDMQFSPDLTYFITS--SRDTNSFLVDVSTLQ------------------------- 251 (369)
T ss_dssp ------------EEEEECCSSCEEEEEECTTSSEEEEE--ETTSEEEEEETTTCC-------------------------
T ss_pred ------------EEEEecCCCceeEEEECCCCCEEEEe--cCCceEEEEECCCCc-------------------------
Confidence 01122344578889999999999998 899999999998875
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccc
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVD 727 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~ 727 (812)
++..+. +...+.+++|+| ++.++++++.++.+.+|... .......+++|+..+++ .
T Consensus 252 ~~~~~~-~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~------------------~~~~~~~i~~~d~~~~~----~ 307 (369)
T 3zwl_B 252 VLKKYE-TDCPLNTAVITP-LKEFIILGGGQEAKDVTTTS------------------ANEGKFEARFYHKIFEE----E 307 (369)
T ss_dssp EEEEEE-CSSCEEEEEECS-SSSEEEEEECCC-------------------------------CEEEEEETTTCC----E
T ss_pred eeeeec-CCCCceeEEecC-CCceEEEeecCCCceEEEEe------------------cCCCcceeEEEecCCCc----c
Confidence 455555 778999999999 78899999999888777642 12224479999999887 4
Q ss_pred cccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 728 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 728 ~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+..+.+|...|++++|+|+++ +|++++.||+|+||+++.+.
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQGT-SYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSS-EEEEEETTSEEEEEEECHHH
T ss_pred hhheecccCcEEEEEECCCCC-EEEEEcCCCeEEEEECcccc
Confidence 678899999999999999999 89999999999999998764
No 65
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=1.7e-34 Score=310.44 Aligned_cols=310 Identities=15% Similarity=0.154 Sum_probs=240.3
Q ss_pred cccccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEE
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
....+.+|...|++++|+|++ ++|++++.|+.|++|++.++ .....+ .+|...|.+++|+|++..+|++|
T Consensus 65 ~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~-------~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~ 137 (383)
T 3ei3_B 65 LHRTASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQ-------NKTSFIQGMGPGDAITGMKFNQFNTNQLFVS 137 (383)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTST-------TCEEEECCCSTTCBEEEEEEETTEEEEEEEE
T ss_pred eEEeccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCc-------ccceeeecCCcCCceeEEEeCCCCCCEEEEE
Confidence 345678999999999999999 99999999999999999875 444444 47999999999999543899999
Q ss_pred eCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE
Q psy4510 292 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV 371 (812)
Q Consensus 292 ~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~ 371 (812)
+.|+.|++||+.... ........+|...|.+++|+|+++ +|++++.||.|++||++ ..++..+ ..|...|.+
T Consensus 138 ~~d~~i~iwd~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~i~i~d~~----~~~~~~~-~~h~~~v~~ 209 (383)
T 3ei3_B 138 SIRGATTLRDFSGSV--IQVFAKTDSWDYWYCCVDVSVSRQ-MLATGDSTGRLLLLGLD----GHEIFKE-KLHKAKVTH 209 (383)
T ss_dssp ETTTEEEEEETTSCE--EEEEECCCCSSCCEEEEEEETTTT-EEEEEETTSEEEEEETT----SCEEEEE-ECSSSCEEE
T ss_pred eCCCEEEEEECCCCc--eEEEeccCCCCCCeEEEEECCCCC-EEEEECCCCCEEEEECC----CCEEEEe-ccCCCcEEE
Confidence 999999999998632 111222334558899999999998 69999999999999995 3345555 689999999
Q ss_pred EEEcCCCC-EEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCCchh
Q psy4510 372 ISWNRTEP-LIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLAVERDSE 448 (812)
Q Consensus 372 l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~ 448 (812)
++|+|+++ +|++|+.||.|++||++..+. ...+..+ .|...|++++|+| ++ .+|++++.|+.|++||+......
T Consensus 210 ~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~-~~l~~~~~d~~i~iwd~~~~~~~- 286 (383)
T 3ei3_B 210 AEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDS-TKLLTTDQRNEIRVYSSYDWSKP- 286 (383)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTS-CEEEEEESSSEEEEEETTBTTSC-
T ss_pred EEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCC-CEEEEEcCCCcEEEEECCCCccc-
Confidence 99999999 999999999999999986433 3344444 7999999999999 76 69999999999999999877421
Q ss_pred HHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCC
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPG 528 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~ 528 (812)
..+..+ +.. ...+...+. +.|+|+
T Consensus 287 -------------~~~~~~------------~~~---------------------------~~~~~~~~~-~~~~p~--- 310 (383)
T 3ei3_B 287 -------------DQIIIH------------PHR---------------------------QFQHLTPIK-ATWHPM--- 310 (383)
T ss_dssp -------------SEEEEC------------CBC---------------------------CCTTSCCCC-CEECSS---
T ss_pred -------------cccccc------------ccc---------------------------ccccccceE-EeccCC---
Confidence 111111 100 000011222 244444
Q ss_pred eEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec
Q psy4510 529 TIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG 608 (812)
Q Consensus 529 ~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~ 608 (812)
+.+..++|+|++++ ++ +
T Consensus 311 -----------------------------------------------------------~~~~~~~~s~dg~~--s~--s 327 (383)
T 3ei3_B 311 -----------------------------------------------------------YDLIVAGRYPDDQL--LL--N 327 (383)
T ss_dssp -----------------------------------------------------------SSEEEEECBCCTTT--CT--T
T ss_pred -----------------------------------------------------------CCceEEEecCCccc--cc--C
Confidence 24556788899988 55 8
Q ss_pred CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC--CCCceEEEEeCCCCCCeEEecCCCceEEEEec
Q psy4510 609 EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP 686 (812)
Q Consensus 609 ~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~ 686 (812)
.||.|++||+.++. ++..+.+ |...+..++|+| ++.+|++++ |+.|+||++
T Consensus 328 ~d~~i~iwd~~~~~-------------------------~~~~l~~~~~~~~~~~~~~s~-~g~~l~s~s-d~~i~iw~~ 380 (383)
T 3ei3_B 328 DKRTIDIYDANSGG-------------------------LVHQLRDPNAAGIISLNKFSP-TGDVLASGM-GFNILIWNR 380 (383)
T ss_dssp CCCCEEEEETTTCC-------------------------EEEEECBTTBCSCCCEEEECT-TSSEEEEEE-TTEEEEEEC
T ss_pred CCCeEEEEecCCCc-------------------------eeeeecCCCCCceEEEEEEec-CccEEEEec-CCcEEEEec
Confidence 99999999998876 5777776 457788889999 788999997 899999998
Q ss_pred CC
Q psy4510 687 RE 688 (812)
Q Consensus 687 ~~ 688 (812)
++
T Consensus 381 ~~ 382 (383)
T 3ei3_B 381 ED 382 (383)
T ss_dssp C-
T ss_pred CC
Confidence 63
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.2e-34 Score=336.47 Aligned_cols=215 Identities=22% Similarity=0.297 Sum_probs=184.1
Q ss_pred cccCCCCCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
..+.+|.+.|++++|++++ ++|++|+.|++|++|++...... ...+...+.+|...|.+++|+|++ .+|++|+.||
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~--~~~~~~~~~~h~~~v~~v~~s~~g-~~l~sgs~Dg 452 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKA--YGVAQRRLTGHSHFVEDVVLSSDG-QFALSGSWDG 452 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTC--SCEEEEEEECCSSCEEEEEECTTS-SEEEEEETTS
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcc--cccccceecCCCCcEEEEEECCCC-CEEEEEeCCC
Confidence 4578999999999999875 68999999999999999764100 113356789999999999999999 8999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEc
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWN 375 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~ 375 (812)
+|+|||+.++. ....+.+|...|.+++|+|+++ .|++|+.|++|++||+..... ..+.....+|...|.+++|+
T Consensus 453 ~v~vwd~~~~~----~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~D~~i~iwd~~~~~~-~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 453 ELRLWDLAAGV----STRRFVGHTKDVLSVAFSLDNR-QIVSASRDRTIKLWNTLGECK-YTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp EEEEEETTTTE----EEEEEECCSSCEEEEEECTTSS-CEEEEETTSCEEEECTTSCEE-EEECSSTTSCSSCEEEEEEC
T ss_pred cEEEEECCCCc----ceeEEeCCCCCEEEEEEeCCCC-EEEEEeCCCEEEEEECCCCcc-eeeccCCCCCCCcEEEEEEe
Confidence 99999999876 5677889999999999999998 599999999999999863211 11222225788999999999
Q ss_pred CCC--CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 376 RTE--PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 376 ~~~--~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
|++ .+|++|+.||.|++||++ ..+....+.+|.+.|++++|+|++ .+|++|+.||+|++||+...
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~---~~~~~~~~~~h~~~v~~v~~spdg-~~l~sg~~Dg~i~iwd~~~~ 593 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLS---NCKLRSTLAGHTGYVSTVAVSPDG-SLCASGGKDGVVLLWDLAEG 593 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETT---TCCEEEEECCCSSCEEEEEECTTS-SEEEEEETTSBCEEEETTTT
T ss_pred CCCCcceEEEEeCCCeEEEEECC---CCcEEEEEcCCCCCEEEEEEeCCC-CEEEEEeCCCeEEEEECCCC
Confidence 987 589999999999999998 467788899999999999999987 69999999999999999766
No 67
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.1e-34 Score=304.11 Aligned_cols=307 Identities=14% Similarity=0.175 Sum_probs=241.6
Q ss_pred ccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 216 QKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 216 ~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+.+|...|++++|+|++++|++++.|+.|++|++.++ +++..+.+|...|.+++|+|++ .+|++++.||
T Consensus 25 ~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~-------~~~~~~~~h~~~v~~~~~~~~~-~~l~s~~~dg 96 (369)
T 3zwl_B 25 AIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNG-------ERLGTLDGHTGTIWSIDVDCFT-KYCVTGSADY 96 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTC-------CEEEEECCCSSCEEEEEECTTS-SEEEEEETTT
T ss_pred cEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCc-------hhhhhhhhcCCcEEEEEEcCCC-CEEEEEeCCC
Confidence 3457899999999999999999999999999999999875 7888999999999999999998 8999999999
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC-----CeEEEEECCCCCcccc--------eeecC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-----LSIRIWDTRVINTKSC--------MLTLP 362 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~--------~~~~~ 362 (812)
.|++||+.++. ....+. |...|.+++|+|+++ +|++++.+ |.|++||++....... +..+
T Consensus 97 ~i~iwd~~~~~----~~~~~~-~~~~v~~~~~~~~~~-~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~- 169 (369)
T 3zwl_B 97 SIKLWDVSNGQ----CVATWK-SPVPVKRVEFSPCGN-YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKI- 169 (369)
T ss_dssp EEEEEETTTCC----EEEEEE-CSSCEEEEEECTTSS-EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEE-
T ss_pred eEEEEECCCCc----EEEEee-cCCCeEEEEEccCCC-EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeec-
Confidence 99999999886 344444 888999999999999 68889888 9999999985433211 1222
Q ss_pred CcCCC--CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 363 NAHTS--DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 363 ~~~~~--~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
..|.. .+.+++|+|++++|++|+.||.|++||++. ....+..+..|...|.+++|+|++ .+|++++.|+.|++||
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~--~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~v~d 246 (369)
T 3zwl_B 170 ITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSN--NYEYVDSIDLHEKSISDMQFSPDL-TYFITSSRDTNSFLVD 246 (369)
T ss_dssp ECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTT--TTEEEEEEECCSSCEEEEEECTTS-SEEEEEETTSEEEEEE
T ss_pred cCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCC--CcEeEEEEecCCCceeEEEECCCC-CEEEEecCCceEEEEE
Confidence 34444 899999999999999999999999999984 367788899999999999999986 6999999999999999
Q ss_pred cCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEE
Q psy4510 441 LAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 441 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 520 (812)
+...+ ..........+..+.|+|++..+++++..++..++
T Consensus 247 ~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~----------------------- 286 (369)
T 3zwl_B 247 VSTLQ-----------------VLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVT----------------------- 286 (369)
T ss_dssp TTTCC-----------------EEEEEECSSCEEEEEECSSSSEEEEEECCC----------------------------
T ss_pred CCCCc-----------------eeeeecCCCCceeEEecCCCceEEEeecCCCceEE-----------------------
Confidence 98763 22222234445555555554333322222111110
Q ss_pred EEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCC
Q psy4510 521 HWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGS 600 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~ 600 (812)
T Consensus 287 -------------------------------------------------------------------------------- 286 (369)
T 3zwl_B 287 -------------------------------------------------------------------------------- 286 (369)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCce
Q psy4510 601 TTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN 680 (812)
Q Consensus 601 ~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~ 680 (812)
..........|++|++.+.. ++..+.+|...|++++|+| ++++|++++.||.
T Consensus 287 --~~~~~~~~~~i~~~d~~~~~-------------------------~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~ 338 (369)
T 3zwl_B 287 --TTSANEGKFEARFYHKIFEE-------------------------EIGRVQGHFGPLNTVAISP-QGTSYASGGEDGF 338 (369)
T ss_dssp ----------CEEEEEETTTCC-------------------------EEEEEECCSSCEEEEEECT-TSSEEEEEETTSE
T ss_pred --EEecCCCcceeEEEecCCCc-------------------------chhheecccCcEEEEEECC-CCCEEEEEcCCCe
Confidence 00000223379999998876 6788899999999999999 7889999999999
Q ss_pred EEEEecCC
Q psy4510 681 IHIWTPRE 688 (812)
Q Consensus 681 v~iWd~~~ 688 (812)
|++|++.+
T Consensus 339 v~iw~~~~ 346 (369)
T 3zwl_B 339 IRLHHFEK 346 (369)
T ss_dssp EEEEEECH
T ss_pred EEEEECcc
Confidence 99998864
No 68
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=1.8e-35 Score=317.30 Aligned_cols=341 Identities=15% Similarity=0.183 Sum_probs=237.3
Q ss_pred EEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRI 346 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~i 346 (812)
.+..+.+.|.+++|+|++ .+|++|+.|+.|++|++.++. ......+.+|...|.+++|+|+++ +|++++.||.|++
T Consensus 6 ~~~~~~~~v~~~~~s~~g-~~l~~~~~d~~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~s~d~~v~v 81 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQR-TEFVTTTATNQVELYEQDGNG--WKHARTFSDHDKIVTCVDWAPKSN-RIVTCSQDRNAYV 81 (377)
T ss_dssp EEEECSSCCSCCEECSSS-SEEECCCSSSCBCEEEEETTE--EEECCCBCCCSSCEEEEEECTTTC-CEEEEETTSSEEE
T ss_pred eEecCCCcEEEEEECCCC-CEEEEecCCCEEEEEEccCCc--eEEEEEEecCCceEEEEEEeCCCC-EEEEEeCCCeEEE
Confidence 344567899999999998 799999999999999998762 015677889999999999999998 6999999999999
Q ss_pred EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-CCCCEEEEEEccCCCc
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESS 425 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~ 425 (812)
||++......+...+ ..|...|.+++|+|++++|++|+.||.|++||++.......+..+.. |...|++++|+|++ .
T Consensus 82 wd~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~ 159 (377)
T 3dwl_C 82 YEKRPDGTWKQTLVL-LRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNN-V 159 (377)
T ss_dssp C------CCCCEEEC-CCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTS-S
T ss_pred EEcCCCCceeeeeEe-cccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCC-C
Confidence 999865423344555 67999999999999999999999999999999985332235677777 99999999999986 6
Q ss_pred EEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCc
Q psy4510 426 TFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPS 505 (812)
Q Consensus 426 ~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 505 (812)
+|++++.|+.|++||+....... .+ .. .+.+
T Consensus 160 ~l~~~~~d~~i~iwd~~~~~~~~----------~~-------~~---------~~~~----------------------- 190 (377)
T 3dwl_C 160 LLAAGCADRKAYVLSAYVRDVDA----------KP-------EA---------SVWG----------------------- 190 (377)
T ss_dssp EEEEEESSSCEEEEEECCSSCC-----------CC-------CS---------CSSC-----------------------
T ss_pred EEEEEeCCCEEEEEEEEecccCC----------Cc-------cc---------cccc-----------------------
Confidence 99999999999999997652100 00 00 0000
Q ss_pred ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEec
Q psy4510 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR 585 (812)
Q Consensus 506 ~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (812)
... + ...+...+ +
T Consensus 191 ---------~~~------~---------------------------------------------------~~~~~~~~-~ 203 (377)
T 3dwl_C 191 ---------SRL------P---------------------------------------------------FNTVCAEY-P 203 (377)
T ss_dssp ---------SCC------C---------------------------------------------------EEEEEECC-C
T ss_pred ---------ccc------c---------------------------------------------------hhhhhhcc-c
Confidence 000 0 00011122 6
Q ss_pred ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeC
Q psy4510 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 665 (812)
Q Consensus 586 h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~s 665 (812)
|...|.+++|+|++++|+++ +.||.|++||+.++... ..++..+.+|...|.+++|+
T Consensus 204 ~~~~v~~~~~sp~~~~l~~~--~~d~~i~iwd~~~~~~~---------------------~~~~~~~~~~~~~v~~~~~s 260 (377)
T 3dwl_C 204 SGGWVHAVGFSPSGNALAYA--GHDSSVTIAYPSAPEQP---------------------PRALITVKLSQLPLRSLLWA 260 (377)
T ss_dssp CSSSEEEEEECTTSSCEEEE--ETTTEEC-CEECSTTSC---------------------EEECCCEECSSSCEEEEEEE
T ss_pred CCceEEEEEECCCCCEEEEE--eCCCcEEEEECCCCCCc---------------------ceeeEeecCCCCceEEEEEc
Confidence 77899999999999999998 89999999999987620 01266788999999999999
Q ss_pred CCCCCeEEecCCCceEEEEecCC-Cce--------------------------eEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 666 STEPGVLATGDCKRNIHIWTPRE-AGA--------------------------WSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 666 p~~~~~las~s~Dg~v~iWd~~~-~~~--------------------------~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
| ++++|++++.|+.+ +|+... +.. .....|++.. ..++..+.
T Consensus 261 ~-~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 329 (377)
T 3dwl_C 261 N-ESAIVAAGYNYSPI-LLQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALR---------STFRNMDL 329 (377)
T ss_dssp E-TTEEEEEESSSSEE-EECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC---------------------------
T ss_pred C-CCCEEEEEcCCcEE-EEEeCCCceEEEeeeccccccccccccccccccccccccccccccc---------ccccchhh
Confidence 9 78899999887777 555542 210 0000011110 11111111
Q ss_pred CCCCCcccccccccCCCcceeEeEEecCCce---eEEeeccCCceEEeee
Q psy4510 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKR---VLASCSVDRSNRIGAR 765 (812)
Q Consensus 719 ~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~---~L~s~s~Dg~i~iWd~ 765 (812)
..... .......+|.+.|++|++.+.+.. .|+|||.||+|+|||+
T Consensus 330 ~g~~~--~~~~~~~~H~~~i~~~~~~~~~~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 330 KGSSQ--SISSLPTVHQNMIATLRPYAGTPGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp ---------CCCSSSCSSCEEEEEEEEEETTEEEEEEEEETTSEEEEECC
T ss_pred ccccc--cccccCccccceeEEEeccCCCCCceEEEEeecCCCcEEEecC
Confidence 10000 023345679999999998766542 4999999999999985
No 69
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2e-35 Score=322.89 Aligned_cols=294 Identities=18% Similarity=0.205 Sum_probs=227.0
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCce
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i 247 (812)
.....+|..+|+|++|+|.++++||+|+.||.|+|||+.++... ....+.+|.+.|++|+|+| ++.+|++++.|++|
T Consensus 112 ~~~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~--~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v 189 (435)
T 4e54_B 112 LQKAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKP--TFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT 189 (435)
T ss_dssp CCEEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCC--EEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE
T ss_pred cccCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCce--eEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE
Confidence 33445788999999999977889999999999999999876532 3456779999999999998 68899999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEc---CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFS---GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 324 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~---~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~ 324 (812)
++||+.++ ....+. .+...+.+++|+|++ .+|++|+.||.|++||++.. ....+.+|...|++
T Consensus 190 ~iwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~dg~i~~wd~~~~-----~~~~~~~h~~~v~~ 255 (435)
T 4e54_B 190 RLQDFKGN--------ILRVFASSDTINIWFCSLDVSASS-RMVVTGDNVGNVILLNMDGK-----ELWNLRMHKKKVTH 255 (435)
T ss_dssp EEEETTSC--------EEEEEECCSSCSCCCCCEEEETTT-TEEEEECSSSBEEEEESSSC-----BCCCSBCCSSCEEE
T ss_pred EEeeccCC--------ceeEEeccCCCCccEEEEEECCCC-CEEEEEeCCCcEeeeccCcc-----eeEEEecccceEEe
Confidence 99999763 233332 233467899999998 89999999999999998754 35678899999999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
++|+|+++.+|++|+.|+.|++||++.......+... .+|...|++++|+|++++|++|+.||.|+|||++. +...
T Consensus 256 v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~-~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~---~~~~ 331 (435)
T 4e54_B 256 VALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYS-LPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQ---WDCP 331 (435)
T ss_dssp EEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBC-CBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSS---SSSE
T ss_pred eeecCCCceEEEEecCcceeeEEecccccccceEEEe-eeccccccceeECCCCCeeEEEcCCCEEEEEECCC---Cccc
Confidence 9999999888999999999999999876544443333 68999999999999999999999999999999984 4555
Q ss_pred EEcccCCC------CEEEEEEccCCCcEEEEEE------------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 405 ATFKHHTA------PVTTVEWHPTESSTFASGG------------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 405 ~~~~~h~~------~v~~v~~~p~~~~~l~s~~------------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
..+..|.. .+....|+|.+. ++++++ .++.|++||..+++. +...
T Consensus 332 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~----------------~~~l 394 (435)
T 4e54_B 332 LGLIPHPHRHFQHLTPIKAAWHPRYN-LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM----------------MCQL 394 (435)
T ss_dssp EEECCCCCCCCSSSCCCBCEECSSSS-CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE----------------EEEE
T ss_pred eEEecccccccccceeEEEEEcCCCC-EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE----------------EEEE
Confidence 55555432 233456777653 444443 345799999988732 2222
Q ss_pred e-cCCCceeEE-EEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 467 H-LGQKEIKEL-HWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 467 ~-~~~~~v~~~-~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
. .+...|.++ +|+|++. ++++++++.+.+|+..
T Consensus 395 ~~~~~~~v~s~~~fspdg~-~lasg~d~~i~iW~~~ 429 (435)
T 4e54_B 395 YDPESSGISSLNEFNPMGD-TLASAMGYHILIWSQQ 429 (435)
T ss_dssp CCSSCCCCCCEEEECTTSS-CEEEECSSEEEECCCC
T ss_pred eCCCCCcEEEEEEECCCCC-EEEEEcCCcEEEEECC
Confidence 2 334467776 6999975 4556665556666443
No 70
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.1e-34 Score=308.32 Aligned_cols=216 Identities=16% Similarity=0.156 Sum_probs=185.2
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
+..|..+|++++|+|++++|++++.++.|++|++.++ ...++..+.+|...|.+++|+|++ .+|++|+.||.|+
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~-----~~~~~~~~~~h~~~v~~~~~~~~~-~~l~~~~~dg~i~ 77 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGN-----KWVQVHELKEHNGQVTGVDWAPDS-NRIVTCGTDRNAY 77 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETT-----EEEEEEEEECCSSCEEEEEEETTT-TEEEEEETTSCEE
T ss_pred ecccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-----cEEeeeeecCCCCcccEEEEeCCC-CEEEEEcCCCeEE
Confidence 3458999999999999999999999999999999874 122788899999999999999998 8999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+||+.++.. .....+..|...|.+++|+|+++ +|++++.||.|++||++..........+...|...|.+++|+|++
T Consensus 78 vwd~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 78 VWTLKGRTW--KPTLVILRINRAARCVRWAPNEK-KFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEETTEE--EEEEECCCCSSCEEEEEECTTSS-EEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEECCCCee--eeeEEeecCCCceeEEEECCCCC-EEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 999977641 12334567899999999999998 699999999999999986543333445557789999999999999
Q ss_pred CEEEEEeCCCcEEEEecCC---------------CCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 379 PLIVSGGDDGCIHVWDLRR---------------FKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~---------------~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
++|++|+.||.|++||++. ...+..+..+..|...|.+++|+|++ .+|++++.|+.|++||+..
T Consensus 155 ~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~i~d~~~ 233 (372)
T 1k8k_C 155 VLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANG-SRVAWVSHDSTVCLADADK 233 (372)
T ss_dssp SEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSS-SEEEEEETTTEEEEEEGGG
T ss_pred CEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCC-CEEEEEeCCCEEEEEECCC
Confidence 9999999999999999742 11457788888999999999999987 6999999999999999875
Q ss_pred C
Q psy4510 444 E 444 (812)
Q Consensus 444 ~ 444 (812)
.
T Consensus 234 ~ 234 (372)
T 1k8k_C 234 K 234 (372)
T ss_dssp T
T ss_pred C
Confidence 5
No 71
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.2e-34 Score=314.29 Aligned_cols=346 Identities=13% Similarity=0.235 Sum_probs=244.1
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--------
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF-------- 268 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~-------- 268 (812)
++.++||++.... ....+.+|.+.|++++|+| ++++|++++.||.|++|++.++. .......
T Consensus 22 ~~~~~v~~~~~~~----~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~-----~~~~~~~~~~~~~~~ 92 (408)
T 4a11_B 22 ESTRRVLGLELNK----DRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSS-----RQSYYTCKAVCSIGR 92 (408)
T ss_dssp HHHHHHHTEEECT----TEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCS-----SSSCEEECEEEEECT
T ss_pred cCcceeeccccCc----ceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCc-----ccceEeccccccccc
Confidence 4568888887765 5667888999999999999 99999999999999999999862 1111111
Q ss_pred ---cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC--eEEEEEECCCe
Q psy4510 269 ---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK--RVLASCSVDLS 343 (812)
Q Consensus 269 ---~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~ 343 (812)
.+|...|.+++|+|++..+|++++.||.|++||+.++. ....+ .+...+.+++|+|.+. .++++++.||.
T Consensus 93 ~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (408)
T 4a11_B 93 DHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQ----TADVF-NFEETVYSHHMSPVSTKHCLVAVGTRGPK 167 (408)
T ss_dssp TCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTE----EEEEE-ECSSCEEEEEECSSCSSCCEEEEEESSSS
T ss_pred cccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCc----cceec-cCCCceeeeEeecCCCCCcEEEEEcCCCe
Confidence 36999999999999655899999999999999999875 23333 3778899999998543 27999999999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEc---------------
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATF--------------- 407 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~--------------- 407 (812)
|++||+++. ..+..+ ..|...|.+++|+|+++ +|++|+.||.|++||++.. ...+..+
T Consensus 168 v~~~d~~~~---~~~~~~-~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 168 VQLCDLKSG---SCSHIL-QGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRA--SGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EEEEESSSS---CCCEEE-CCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCS--SCCSEECCTTTTCSCCCTTTSS
T ss_pred EEEEeCCCc---ceeeee-cCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCC--Ccccccccccccccceeecccc
Confidence 999999853 345555 68999999999999998 6999999999999999862 2234444
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
..|...|.+++|+|++ .+|++++.||.|++||+...... ...... .
T Consensus 242 ~~~~~~v~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~~~-----------------~~~~~~----------~------ 287 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDG-LHLLTVGTDNRMRLWNSSNGENT-----------------LVNYGK----------V------ 287 (408)
T ss_dssp CSCSSCEEEEEECTTS-SEEEEEETTSCEEEEETTTCCBC-----------------CCCCCC----------C------
T ss_pred ccccCceeEEEEcCCC-CEEEEecCCCeEEEEECCCCccc-----------------eecccc----------c------
Confidence 5789999999999986 69999999999999999876320 000000 0
Q ss_pred EEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCC
Q psy4510 488 STANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEG 567 (812)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 567 (812)
. ..
T Consensus 288 -------------------------~----------~~------------------------------------------ 290 (408)
T 4a11_B 288 -------------------------C----------NN------------------------------------------ 290 (408)
T ss_dssp -------------------------C----------CC------------------------------------------
T ss_pred -------------------------c----------cc------------------------------------------
Confidence 0 00
Q ss_pred CCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 568 SGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 568 ~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
....+........+..++++ +.++.|++||+.++.
T Consensus 291 ------------------~~~~~~~~~~~~~~~~~~~~--~~~~~i~v~d~~~~~------------------------- 325 (408)
T 4a11_B 291 ------------------SKKGLKFTVSCGCSSEFVFV--PYGSTIAVYTVYSGE------------------------- 325 (408)
T ss_dssp ------------------CSSCCCCEECCSSSSCEEEE--EETTEEEEEETTTCC-------------------------
T ss_pred ------------------ccccceeEEecCCCceEEEE--ecCCEEEEEECcCCc-------------------------
Confidence 00000000111223345555 578999999999876
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE--------EecCCCCEEEeecCCCeEEEeecC
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY--------LYTNRFGVLATGDCKRNIHIWTPR 719 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~--------~~s~dg~~lasgs~dg~i~iwd~~ 719 (812)
++..+.+|...|++++|+| ++.+|++++.||.|++|++.+++..... ..........+.+.++.+++|+..
T Consensus 326 ~~~~~~~~~~~v~~~~~s~-~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~ 404 (408)
T 4a11_B 326 QITMLKGHYKTVDCCVFQS-NFQELYSGSRDCNILAWVPSLYEPVPDDDETTTKSQLNPAFEDAWSSSDEEGGTSAWSHP 404 (408)
T ss_dssp EEEEECCCSSCEEEEEEET-TTTEEEEEETTSCEEEEEECC---------------------------------------
T ss_pred ceeeeccCCCeEEEEEEcC-CCCEEEEECCCCeEEEEeCCCCCccCCCCceEeccccccccceeecccCccCceeecCCc
Confidence 7888999999999999999 7889999999999999999986554321 122334456677789999999865
Q ss_pred C
Q psy4510 720 E 720 (812)
Q Consensus 720 ~ 720 (812)
.
T Consensus 405 ~ 405 (408)
T 4a11_B 405 Q 405 (408)
T ss_dssp -
T ss_pred c
Confidence 3
No 72
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.8e-35 Score=308.10 Aligned_cols=262 Identities=21% Similarity=0.331 Sum_probs=213.6
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEE
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAE 249 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~v 249 (812)
+.||.+.|++++|+| +|++||||+.|++|+|||+.++.. .....+.+|..+|.+++|++ ++++|++++.|++|++
T Consensus 9 ~~~H~~~V~~v~~s~-~g~~lasgs~D~~v~lwd~~~~~~--~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~i 85 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDY-YGTRLATCSSDRSVKIFDVRNGGQ--ILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVII 85 (316)
T ss_dssp -----CCEEEEEECG-GGCEEEEEETTTEEEEEEEETTEE--EEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEE
T ss_pred cccccCeEEEeeEcC-CCCEEEEEeCCCeEEEEEecCCCc--EEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEE
Confidence 348999999999999 999999999999999999976542 13567889999999999986 4899999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
||+.++ ...+...+.+|...|.+++|+|+. ..+|++|+.|++|++|++.....+. ....+.+|...|.+++|+
T Consensus 86 Wd~~~~-----~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~~~~~~ 159 (316)
T 3bg1_A 86 WREENG-----TWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCNAVSWA 159 (316)
T ss_dssp ECCSSS-----CCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBCCCEEC
T ss_pred EECCCC-----cceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcceEEEc
Confidence 999875 235667888999999999999983 2789999999999999998764322 245667899999999999
Q ss_pred CCC----------------CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC----CEEEEEeCCC
Q psy4510 329 PGE----------------KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE----PLIVSGGDDG 388 (812)
Q Consensus 329 p~~----------------~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----~~l~sg~~dg 388 (812)
|+. ..+|++|+.|++|++||++......++..+ .+|...|++++|+|++ ++|++|+.||
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l-~~h~~~V~~v~~sp~~~~~~~~las~s~D~ 238 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKL-EAHSDWVRDVAWAPSIGLPTSTIASCSQDG 238 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECC-BCCSSCEEEEECCCCSSCSCCEEEEEETTC
T ss_pred cccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeec-ccCCCceEEEEecCCCCCCCceEEEEcCCC
Confidence 973 136999999999999999743222345555 7899999999999986 7999999999
Q ss_pred cEEEEecCCCCCC-CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKG-SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~-~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|++|+++..... .....+..|...|.+++|+|++ .+|++++.|++|++|+....
T Consensus 239 ~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g-~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 239 RVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA-NILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp EEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT-CCEEEEESSSCEEEEEECTT
T ss_pred eEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC-CEEEEEcCCCeEEEEEECCC
Confidence 9999999752211 1223456789999999999997 68999999999999998643
No 73
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=1.4e-34 Score=307.65 Aligned_cols=320 Identities=17% Similarity=0.254 Sum_probs=238.3
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC---CCeEEEEE
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG---EKRVLASC 338 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~~l~s~ 338 (812)
...+.+|...|.+++|+|++..++++|+. ||.|++|++.++.. ......+|...|.+++|+|+ +. +|++|
T Consensus 11 ~~~~~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~-~l~~~ 86 (357)
T 3i2n_A 11 AHIQKGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDL---KLLREIEKAKPIKCGTFGATSLQQR-YLATG 86 (357)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSE---EEEEEEEESSCEEEEECTTCCTTTC-CEEEE
T ss_pred hhhccCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcc---cceeeecccCcEEEEEEcCCCCCCc-eEEEe
Confidence 34567899999999999998667778876 99999999998762 12223478999999999999 45 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEE------EcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS------WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~------~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
+.||.|++||++... ..+..+ ..|...|.+++ |+|++++|++|+.||.|++||++. ...++..+..|.+
T Consensus 87 ~~dg~i~iwd~~~~~--~~~~~~-~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~--~~~~~~~~~~~~~ 161 (357)
T 3i2n_A 87 DFGGNLHIWNLEAPE--MPVYSV-KGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQ--KDDPVANMEPVQG 161 (357)
T ss_dssp ETTSCEEEECTTSCS--SCSEEE-CCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTS--CSSCSEEECCCTT
T ss_pred cCCCeEEEEeCCCCC--ccEEEE-EecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCC--CCCcceeccccCC
Confidence 999999999998543 144555 68999999995 468899999999999999999985 2236777766554
Q ss_pred ----CEEEEE----EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 413 ----PVTTVE----WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 413 ----~v~~v~----~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
.|.++. |+|++ .+|++++.|+.|++||++... ..
T Consensus 162 ~~~~~v~~~~~~~~~~~~~-~~l~~~~~d~~i~i~d~~~~~-----------------~~-------------------- 203 (357)
T 3i2n_A 162 ENKRDCWTVAFGNAYNQEE-RVVCAGYDNGDIKLFDLRNMA-----------------LR-------------------- 203 (357)
T ss_dssp SCCCCEEEEEEECCCC-CC-CEEEEEETTSEEEEEETTTTE-----------------EE--------------------
T ss_pred CCCCceEEEEEEeccCCCC-CEEEEEccCCeEEEEECccCc-----------------ee--------------------
Confidence 899998 67776 699999999999999987651 00
Q ss_pred EEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccccc
Q psy4510 485 TIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDE 564 (812)
Q Consensus 485 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~ 564 (812)
T Consensus 204 -------------------------------------------------------------------------------- 203 (357)
T 3i2n_A 204 -------------------------------------------------------------------------------- 203 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCccccCCCccceEEecccceEEEEEEec---cCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCC
Q psy4510 565 SEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ---YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKG 641 (812)
Q Consensus 565 ~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~---~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 641 (812)
....|...|.+++|+| ++.+++++ +.||.|++||+.+....
T Consensus 204 -----------------~~~~~~~~v~~~~~~~~~~~~~~l~~~--~~dg~i~i~d~~~~~~~----------------- 247 (357)
T 3i2n_A 204 -----------------WETNIKNGVCSLEFDRKDISMNKLVAT--SLEGKFHVFDMRTQHPT----------------- 247 (357)
T ss_dssp -----------------EEEECSSCEEEEEESCSSSSCCEEEEE--ESTTEEEEEEEEEEETT-----------------
T ss_pred -----------------eecCCCCceEEEEcCCCCCCCCEEEEE--CCCCeEEEEeCcCCCcc-----------------
Confidence 0112233677778888 78889888 89999999999886511
Q ss_pred CCCCCCCeeeecCCCCceEEEEeCCCCCC-eEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCC
Q psy4510 642 PGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPRE 720 (812)
Q Consensus 642 ~~~~~~~~~~~~gh~~~V~~l~~sp~~~~-~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~ 720 (812)
.......+.+|...|++++|+| ++. +|++++.||.|++||+.++...... .++|...... +..
T Consensus 248 ---~~~~~~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~~~--~~~g~~~~~~---~~~------- 311 (357)
T 3i2n_A 248 ---KGFASVSEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRSKK--DSEGIEMGVA---GSV------- 311 (357)
T ss_dssp ---TEEEEEEEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC--C--CTTSCCCCCC---CEE-------
T ss_pred ---cceeeeccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccccc--cCCCCccccc---ccc-------
Confidence 0001223459999999999999 566 8999999999999998754432211 1222111100 000
Q ss_pred CCCcccccccccCCCcceeEeEEecCCceeEE-eeccCCceEEeeecCcc
Q psy4510 721 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA-SCSVDRSNRIGARRDML 769 (812)
Q Consensus 721 ~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~-s~s~Dg~i~iWd~~~~~ 769 (812)
.++..+.+|...|++++|+|+|+ +|+ |++.||.|+|||+....
T Consensus 312 -----~~~~~~~~~~~~v~~~~~s~~~~-~l~~s~~~d~~i~iw~~~~~~ 355 (357)
T 3i2n_A 312 -----SLLQNVTLSTQPISSLDWSPDKR-GLCVCSSFDQTVRVLIVTKLN 355 (357)
T ss_dssp -----EEEEEEECCSSCEEEEEECSSST-TEEEEEETTSEEEEEEECC--
T ss_pred -----ceeeccccCCCCeeEEEEcCCCC-eEEEEecCCCcEEEEECCCcc
Confidence 14557889999999999999999 677 89999999999998764
No 74
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5.2e-34 Score=297.16 Aligned_cols=290 Identities=16% Similarity=0.207 Sum_probs=240.0
Q ss_pred CCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC
Q psy4510 262 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD 341 (812)
Q Consensus 262 ~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d 341 (812)
.++..++.+|.+.|.+++| |++ .+|++|+.||.|++||+.+.. ....+..|...|.+++|+|++. +|++++.|
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~~~-~~l~s~~~dg~v~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~-~l~~~~~d 80 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-VDD-SKVASVSRDGTVRLWSKDDQW----LGTVVYTGQGFLNSVCYDSEKE-LLLFGGKD 80 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-EET-TEEEEEETTSEEEEEEESSSE----EEEEEEECSSCEEEEEEETTTT-EEEEEETT
T ss_pred HHHHHHhhCCCCCcEEEEe-cCC-CEEEEEEcCCcEEEEECCCCE----EEEEeecCCccEEEEEECCCCC-EEEEecCC
Confidence 4677889999999999999 887 799999999999999997765 4566778999999999999998 69999999
Q ss_pred CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 342 LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 342 g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
|.|++|++........+..+ ..|...|.+++| +++++++|+.||.|++||. ...+..+..|...|.++.|+|
T Consensus 81 g~i~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~--~~~~l~~~~~d~~i~~~d~-----~~~~~~~~~~~~~v~~~~~~~ 152 (313)
T 3odt_A 81 TMINGVPLFATSGEDPLYTL-IGHQGNVCSLSF--QDGVVISGSWDKTAKVWKE-----GSLVYNLQAHNASVWDAKVVS 152 (313)
T ss_dssp SCEEEEETTCCTTSCC-CEE-CCCSSCEEEEEE--ETTEEEEEETTSEEEEEET-----TEEEEEEECCSSCEEEEEEEE
T ss_pred CeEEEEEeeecCCCCcccch-hhcccCEEEEEe--cCCEEEEEeCCCCEEEEcC-----CcEEEecccCCCceeEEEEcc
Confidence 99999999876655666666 789999999999 5679999999999999993 467888889999999999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.+..+|++++.|+.|++||.... ..
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~~~~-------------------~~------------------------------------ 177 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQNDKV-------------------IK------------------------------------ 177 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETTEE-------------------EE------------------------------------
T ss_pred CCCCEEEEEECCCCEEEEecCce-------------------EE------------------------------------
Confidence 44579999999999999993211 00
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 178 -------------------------------------------------------------------------------- 177 (313)
T 3odt_A 178 -------------------------------------------------------------------------------- 177 (313)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEe-cccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceE
Q psy4510 582 YFI-RHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 660 (812)
Q Consensus 582 ~~~-~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~ 660 (812)
.+. .|...+.+++|+|++. ++++ +.||.|++||+.++. ++..+.+|...|+
T Consensus 178 ~~~~~~~~~i~~~~~~~~~~-~~~~--~~dg~i~i~d~~~~~-------------------------~~~~~~~~~~~i~ 229 (313)
T 3odt_A 178 TFSGIHNDVVRHLAVVDDGH-FISC--SNDGLIKLVDMHTGD-------------------------VLRTYEGHESFVY 229 (313)
T ss_dssp EECSSCSSCEEEEEEEETTE-EEEE--ETTSEEEEEETTTCC-------------------------EEEEEECCSSCEE
T ss_pred EEeccCcccEEEEEEcCCCe-EEEc--cCCCeEEEEECCchh-------------------------hhhhhhcCCceEE
Confidence 001 1334678889999888 7777 799999999998876 6788899999999
Q ss_pred EEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeE
Q psy4510 661 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVED 740 (812)
Q Consensus 661 ~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~ 740 (812)
+++|+| ++ .|++++.||.|++||+. +++ +...+.+|...|++
T Consensus 230 ~~~~~~-~~-~l~~~~~dg~v~iwd~~--------------------------------~~~----~~~~~~~~~~~i~~ 271 (313)
T 3odt_A 230 CIKLLP-NG-DIVSCGEDRTVRIWSKE--------------------------------NGS----LKQVITLPAISIWS 271 (313)
T ss_dssp EEEECT-TS-CEEEEETTSEEEEECTT--------------------------------TCC----EEEEEECSSSCEEE
T ss_pred EEEEec-CC-CEEEEecCCEEEEEECC--------------------------------CCc----eeEEEeccCceEEE
Confidence 999999 55 56677776666666653 443 34566778889999
Q ss_pred eEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 741 LQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 741 l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
++|+|+++ |++++.||.|++|+++.++
T Consensus 272 ~~~~~~~~--~~~~~~dg~i~iw~~~~~~ 298 (313)
T 3odt_A 272 VDCMSNGD--IIVGSSDNLVRIFSQEKSR 298 (313)
T ss_dssp EEECTTSC--EEEEETTSCEEEEESCGGG
T ss_pred EEEccCCC--EEEEeCCCcEEEEeCCCCc
Confidence 99999998 5679999999999999876
No 75
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1e-34 Score=309.84 Aligned_cols=338 Identities=16% Similarity=0.215 Sum_probs=239.7
Q ss_pred EEcCCCCcEEEEEecCC---CCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCEEEEEEcCCCC---eEEEEEE
Q psy4510 267 SFSGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQWSPGEK---RVLASCS 339 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v~~~~~~p~~~---~~l~s~~ 339 (812)
...+|.+.|.+++|+|+ +...+++++.++.|++|++.++....... .....|...|.+++|+|++. .+|++|+
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 34589999999999984 44667777777899999998765321111 11223778899999999942 3799999
Q ss_pred CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecCCCCCCCceEEc---ccCCCCEE
Q psy4510 340 VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLRRFKKGSSVATF---KHHTAPVT 415 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~ 415 (812)
.||.|++||+.+ ...+..+ ..|...|++++|+| ++++|++|+.||.|++||++ .++.+..+ ..|...|.
T Consensus 93 ~dg~i~v~d~~~---~~~~~~~-~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~v~ 165 (366)
T 3k26_A 93 SRGIIRIINPIT---MQCIKHY-VGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ---TDTLVAIFGGVEGHRDEVL 165 (366)
T ss_dssp TTCEEEEECTTT---CCEEEEE-ESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT---TTEEEEEECSTTSCSSCEE
T ss_pred CCCEEEEEEchh---ceEeeee-cCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee---cCeEEEEecccccccCcee
Confidence 999999999984 3445555 68999999999999 88999999999999999998 45666776 78999999
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN 495 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~ 495 (812)
+++|+|++ .+|++++.||.|++||+...+....... .+.++|+...+....
T Consensus 166 ~~~~~~~~-~~l~~~~~dg~i~i~d~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~------ 216 (366)
T 3k26_A 166 SADYDLLG-EKIMSCGMDHSLKLWRINSKRMMNAIKE----------------------SYDYNPNKTNRPFIS------ 216 (366)
T ss_dssp EEEECTTS-SEEEEEETTSCEEEEESCSHHHHHHHHH----------------------HHTCCGGGCSSCCCC------
T ss_pred EEEECCCC-CEEEEecCCCCEEEEECCCCccccccce----------------------eEEecCCCCcccccc------
Confidence 99999986 6999999999999999987632211100 011122211000000
Q ss_pred EEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 496 IFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
...
T Consensus 217 ------------------------~~~----------------------------------------------------- 219 (366)
T 3k26_A 217 ------------------------QKI----------------------------------------------------- 219 (366)
T ss_dssp ------------------------EEE-----------------------------------------------------
T ss_pred ------------------------eee-----------------------------------------------------
Confidence 000
Q ss_pred CCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 655 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh 655 (812)
..........|...|.+++|+ +++++++ +.||.|++||+.+........ ........++..+.+|
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~--~~d~~i~~wd~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~ 284 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GDLILSK--SCENAIVCWKPGKMEDDIDKI-----------KPSESNVTILGRFDYS 284 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TTEEEEE--CSSSEEEEEEESSTTCCGGGC-----------CTTCCCEEEEEEEECS
T ss_pred ccCccccccCCcceEEEEEEc--CCEEEEE--ecCCEEEEEeCCCcccccccc-----------ccCCcchheecccccc
Confidence 000122334577889999998 7788888 899999999998765321000 0011112357778899
Q ss_pred CCceEEEEeCCCC--CCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccC
Q psy4510 656 LTEGFAMDWSSTE--PGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 733 (812)
Q Consensus 656 ~~~V~~l~~sp~~--~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~g 733 (812)
...|++++|+| + +.+|++++.||.|++||+ .+++........+.+
T Consensus 285 ~~~v~~~~~s~-~~~~~~l~~~~~dg~i~vwd~--------------------------------~~~~~~~~~~~~~~~ 331 (366)
T 3k26_A 285 QCDIWYMRFSM-DFWQKMLALGNQVGKLYVWDL--------------------------------EVEDPHKAKCTTLTH 331 (366)
T ss_dssp SCCSSCCCCEE-CTTSSEEEEECTTSCEEEEEC--------------------------------CSSSGGGCEEEEECC
T ss_pred CCcEEEEEEcC-CCCCcEEEEEecCCcEEEEEC--------------------------------CCCCCccccceEEcc
Confidence 99999999998 5 556666666555555554 444322112335666
Q ss_pred C--CcceeEeEEecCCceeEEeeccCCceEEeeec
Q psy4510 734 H--TNSVEDLQWSPGEKRVLASCSVDRSNRIGARR 766 (812)
Q Consensus 734 H--~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~ 766 (812)
| ...|++++|+|+++ +|++++.||.|+|||+.
T Consensus 332 ~~~~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 332 HKCGAAIRQTSFSRDSS-ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp TTCCSCEEEEEECTTSS-EEEEEETTSEEEEEEC-
T ss_pred cccCCceEEEEeCCCCC-eEEEEeCCCEEEEEEec
Confidence 6 78999999999999 89999999999999985
No 76
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.1e-35 Score=316.69 Aligned_cols=253 Identities=13% Similarity=0.191 Sum_probs=205.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|.++|++++|+| ++++||+|+.||.|+||++.++.. .....+.+|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 9 ~~~~~v~~~~~s~-~g~~l~~~~~d~~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~ 85 (377)
T 3dwl_C 9 ILPKPSYEHAFNS-QRTEFVTTTATNQVELYEQDGNGW--KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKR 85 (377)
T ss_dssp ECSSCCSCCEECS-SSSEEECCCSSSCBCEEEEETTEE--EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC---
T ss_pred cCCCcEEEEEECC-CCCEEEEecCCCEEEEEEccCCce--EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcC
Confidence 3668999999999 999999999999999999987620 1667888999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEK 332 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~ 332 (812)
++. ...+...+.+|...|.+++|+|++ .+|++|+.|+.|++||+..+..+. ....+.+ |...|.+++|+|+++
T Consensus 86 ~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~ 159 (377)
T 3dwl_C 86 PDG----TWKQTLVLLRLNRAATFVRWSPNE-DKFAVGSGARVISVCYFEQENDWW-VSKHLKRPLRSTILSLDWHPNNV 159 (377)
T ss_dssp -------CCCCEEECCCCSSCEEEEECCTTS-SCCEEEESSSCEEECCC-----CC-CCEEECSSCCSCEEEEEECTTSS
T ss_pred CCC----ceeeeeEecccCCceEEEEECCCC-CEEEEEecCCeEEEEEECCcccce-eeeEeecccCCCeEEEEEcCCCC
Confidence 851 134778888999999999999998 799999999999999998875322 1445566 999999999999998
Q ss_pred eEEEEEECCCeEEEEECCCCC---------------cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVIN---------------TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~---------------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
+|++++.||.|++||++... ...++..+ .|...|++++|+|++++|++|+.||.|++||++.
T Consensus 160 -~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~ 236 (377)
T 3dwl_C 160 -LLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY--PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSA 236 (377)
T ss_dssp -EEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC--CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECS
T ss_pred -EEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc--cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCC
Confidence 69999999999999986322 12233333 8999999999999999999999999999999985
Q ss_pred CCCCCc----eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 398 FKKGSS----VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 398 ~~~~~~----~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+.. +..+..|..+|.+++|+|++ .+|++++.+ .+.+|+...
T Consensus 237 ---~~~~~~~~~~~~~~~~~v~~~~~s~~~-~~l~~~~~~-~~~~~~~~~ 281 (377)
T 3dwl_C 237 ---PEQPPRALITVKLSQLPLRSLLWANES-AIVAAGYNY-SPILLQGNE 281 (377)
T ss_dssp ---TTSCEEECCCEECSSSCEEEEEEEETT-EEEEEESSS-SEEEECCCC
T ss_pred ---CCCcceeeEeecCCCCceEEEEEcCCC-CEEEEEcCC-cEEEEEeCC
Confidence 344 67788999999999999997 577777655 566887764
No 77
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.9e-34 Score=311.59 Aligned_cols=221 Identities=15% Similarity=0.141 Sum_probs=178.1
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC---CC---CEE
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST---EP---GVL 288 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~---~~---~~l 288 (812)
....+.+|...|++++|+| ++|++++.|+.|++|++.++... ....++..+.+|...|.+++|+|+ .. .+|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~-~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNE-NPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTC-CGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccc-cCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 4567889999999999999 89999999999999999885100 012367888999999999999998 22 489
Q ss_pred EEEeCCCcEEEEeCCCCCcc-eeccccccCC-----CCCEEEEEEc----CCCCeE-EEEEECCCeEEEEECCC------
Q psy4510 289 ATGDCKRNIHIWTPREAGAW-QVDQKPLVGH-----TNSVEDLQWS----PGEKRV-LASCSVDLSIRIWDTRV------ 351 (812)
Q Consensus 289 ~sg~~dg~i~vwd~~~~~~~-~~~~~~~~~h-----~~~v~~~~~~----p~~~~~-l~s~~~dg~i~iwd~~~------ 351 (812)
++|+.||.|++|++.++... ......+..| ...|.+++|+ |+++ + |++++.||.|++||++.
T Consensus 85 ~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~l~~~~~dg~i~iwd~~~~~~~~~ 163 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLS-HRLVATDVKGTTYIWKFHPFADESN 163 (397)
T ss_dssp EEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----C-EEEEEEETTSCEEEEEEESSSSHHH
T ss_pred EEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCc-eEEEEEeCCCcEEEEeCCccccccc
Confidence 99999999999999887620 0015566777 5899999999 9998 6 99999999999999985
Q ss_pred CCccc--ceeecC------CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc---C---CCCEEEE
Q psy4510 352 INTKS--CMLTLP------NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH---H---TAPVTTV 417 (812)
Q Consensus 352 ~~~~~--~~~~~~------~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~---h---~~~v~~v 417 (812)
..... ....+. ..|...|.+++|+|++ +|++|+.||.|++||++ ..+.+..+.. | ...|.++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~---~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 164 SLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELS---TLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETT---TTEEEEEEECCC---CCCCCEEEE
T ss_pred cceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECC---CCceeEEEeccccccccCCccceE
Confidence 22211 000221 4578899999999999 99999999999999998 4677888888 9 9999999
Q ss_pred EEccCCCcEEEEEECC---CCEEEEEcCCC
Q psy4510 418 EWHPTESSTFASGGAD---DQIALWDLAVE 444 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~d---g~v~iwd~~~~ 444 (812)
+|+|++ .+|++++.| +.|++||+...
T Consensus 240 ~~~~~~-~~l~~~~~d~~~g~i~i~d~~~~ 268 (397)
T 1sq9_A 240 KFSPQG-SLLAIAHDSNSFGCITLYETEFG 268 (397)
T ss_dssp EECSST-TEEEEEEEETTEEEEEEEETTTC
T ss_pred EECCCC-CEEEEEecCCCCceEEEEECCCC
Confidence 999986 699999999 99999999865
No 78
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=2.2e-34 Score=311.14 Aligned_cols=256 Identities=13% Similarity=0.186 Sum_probs=215.1
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCC----C---CcE
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDL----K---TAL 238 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~----~---~~l 238 (812)
....+.+|.+.|++++|+| ++||+|+.||.|+||++.+... .......+.+|..+|++++|+|+ + ++|
T Consensus 8 ~~~~~~~h~~~i~~~~~~~---~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l 84 (397)
T 1sq9_A 8 TANAGKAHDADIFSVSACN---SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLV 84 (397)
T ss_dssp EEEESSCSSSCEEEEEECS---SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEE
T ss_pred hhhhhhhhhcCeEEEEecC---CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEE
Confidence 3445568999999999988 7999999999999999988652 12245667799999999999999 9 999
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCC-----ceEEcCC-----CCcEEEEEec----CCCCCE-EEEEeCCCcEEEEeCC
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPP-----LFSFSGH-----LTEGFAMDWS----STEPGV-LATGDCKRNIHIWTPR 303 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~-----~~~~~~h-----~~~v~~l~~s----p~~~~~-l~sg~~dg~i~vwd~~ 303 (812)
++++.|+.|++|++.++ .. +..+.+| ...|.+++|+ |++ .+ |++|+.||.|++||+.
T Consensus 85 ~s~~~dg~i~iw~~~~~-------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~l~~~~~dg~i~iwd~~ 156 (397)
T 1sq9_A 85 ATTSFSGDLLFYRITRE-------DETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLL-SHRLVATDVKGTTYIWKFH 156 (397)
T ss_dssp EEEETTSCEEEEEEEEC-------TTTCCEEEEEECCSCTTGGGSCEEEEEEECCC-----CEEEEEEETTSCEEEEEEE
T ss_pred EEEcCCCCEEEEEccCC-------cccccccceeecccccccCCCcEEEEEEeeccCCCC-ceEEEEEeCCCcEEEEeCC
Confidence 99999999999999885 44 7788888 5999999999 988 67 9999999999999998
Q ss_pred C------CCccee-ccccc-------cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc---C-
Q psy4510 304 E------AGAWQV-DQKPL-------VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA---H- 365 (812)
Q Consensus 304 ~------~~~~~~-~~~~~-------~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~- 365 (812)
. ...... ....+ ..|...|.+++|+|++ +|++++.||.|++||+++ ...+..+ .. |
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~i~i~d~~~---~~~~~~~-~~~~~h~ 230 (397)
T 1sq9_A 157 PFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG--LIATGFNNGTVQISELST---LRPLYNF-ESQHSMI 230 (397)
T ss_dssp SSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS--EEEEECTTSEEEEEETTT---TEEEEEE-ECCC---
T ss_pred ccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc--eEEEEeCCCcEEEEECCC---CceeEEE-ecccccc
Confidence 8 442110 00044 4588999999999999 699999999999999984 3445555 45 8
Q ss_pred --CCCeEEEEEcCCCCEEEEEeCC---CcEEEEecCCCCCCCceEEccc-------------CCCCEEEEEEccCCCcEE
Q psy4510 366 --TSDVNVISWNRTEPLIVSGGDD---GCIHVWDLRRFKKGSSVATFKH-------------HTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 366 --~~~v~~l~~~~~~~~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~l 427 (812)
...|.+++|+|++++|++|+.| |.|++||++ ..+.+..+.. |...|.+++|+|++ .+|
T Consensus 231 ~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l 306 (397)
T 1sq9_A 231 NNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE---FGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSG-ETL 306 (397)
T ss_dssp CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT---TCCEEEEECBC--------CCBSBSSCEEEEEECSSS-SEE
T ss_pred ccCCccceEEECCCCCEEEEEecCCCCceEEEEECC---CCcccceeccCcccccccccccccCCcEEEEEECCCC-CEE
Confidence 8999999999999999999999 999999998 4678888888 99999999999987 699
Q ss_pred EEEECCCCEEEEEcCCC
Q psy4510 428 ASGGADDQIALWDLAVE 444 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~ 444 (812)
++++.|+.|++||+...
T Consensus 307 ~~~~~dg~i~iwd~~~~ 323 (397)
T 1sq9_A 307 CSAGWDGKLRFWDVKTK 323 (397)
T ss_dssp EEEETTSEEEEEETTTT
T ss_pred EEEeCCCeEEEEEcCCC
Confidence 99999999999999766
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.7e-34 Score=308.21 Aligned_cols=257 Identities=14% Similarity=0.235 Sum_probs=208.3
Q ss_pred CCCCCceEEEEeCCC---CCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCC----CCcEEEeeCC
Q psy4510 173 SGHLTEGFAMDWSST---EPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDL----KTALQTVDDP 244 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~---~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~----~~~l~s~~~d 244 (812)
.+|.++|++++|+|. ...++++++.++.|+||++.+++...... .....|...|++++|+|+ +++|++++.|
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 389999999999982 24455555556799999998766332211 122247789999999999 6689999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC-CCCCEEEEEeCCCcEEEEeCCCCCcceeccccc---cCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---VGHTN 320 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---~~h~~ 320 (812)
+.|++|++.++ +++..+.+|...|.+++|+| ++ .+|++|+.||.|++||+.++. ....+ .+|..
T Consensus 95 g~i~v~d~~~~-------~~~~~~~~~~~~i~~~~~~~~~~-~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~ 162 (366)
T 3k26_A 95 GIIRIINPITM-------QCIKHYVGHGNAINELKFHPRDP-NLLLSVSKDHALRLWNIQTDT----LVAIFGGVEGHRD 162 (366)
T ss_dssp CEEEEECTTTC-------CEEEEEESCCSCEEEEEECSSCT-TEEEEEETTSCEEEEETTTTE----EEEEECSTTSCSS
T ss_pred CEEEEEEchhc-------eEeeeecCCCCcEEEEEECCCCC-CEEEEEeCCCeEEEEEeecCe----EEEEecccccccC
Confidence 99999999875 77888999999999999999 55 899999999999999998876 33333 68999
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccce------------------------eecCCcCCCCeEEEEEcC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCM------------------------LTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~------------------------~~~~~~~~~~v~~l~~~~ 376 (812)
.|.+++|+|++. +|++++.||.|++||+++......+ ......|...|.+++|+
T Consensus 163 ~v~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~- 240 (366)
T 3k26_A 163 EVLSADYDLLGE-KIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL- 240 (366)
T ss_dssp CEEEEEECTTSS-EEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE-
T ss_pred ceeEEEECCCCC-EEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc-
Confidence 999999999998 6999999999999999853211100 01113489999999999
Q ss_pred CCCEEEEEeCCCcEEEEecCCCCC-----------CCceEEcccCCCCEEEEEEccC--CCcEEEEEECCCCEEEEEcCC
Q psy4510 377 TEPLIVSGGDDGCIHVWDLRRFKK-----------GSSVATFKHHTAPVTTVEWHPT--ESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 377 ~~~~l~sg~~dg~i~iwd~~~~~~-----------~~~~~~~~~h~~~v~~v~~~p~--~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+++|++++.||.|++||++.... ...+..+..|...|++++|+|+ + .+|++++.||.|++||+..
T Consensus 241 -~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~-~~l~~~~~dg~i~vwd~~~ 318 (366)
T 3k26_A 241 -GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQ-KMLALGNQVGKLYVWDLEV 318 (366)
T ss_dssp -TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTS-SEEEEECTTSCEEEEECCS
T ss_pred -CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCC-cEEEEEecCCcEEEEECCC
Confidence 77999999999999999985321 0237788889999999999998 6 6999999999999999987
Q ss_pred CC
Q psy4510 444 ER 445 (812)
Q Consensus 444 ~~ 445 (812)
..
T Consensus 319 ~~ 320 (366)
T 3k26_A 319 ED 320 (366)
T ss_dssp SS
T ss_pred CC
Confidence 63
No 80
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=1.9e-33 Score=304.92 Aligned_cols=261 Identities=16% Similarity=0.170 Sum_probs=202.2
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc---------cccCCCCCCeeeeeEcC-CCCcE
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ---------KPLGGHTNSAEDLQWSD-LKTAL 238 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~---------~~l~~h~~~V~~l~~s~-~~~~l 238 (812)
...+.+|.+.|++++|+|.++++||+|+.||.|+||++.+........ ....+|...|.+++|+| ++.+|
T Consensus 36 ~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l 115 (408)
T 4a11_B 36 RDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMF 115 (408)
T ss_dssp EEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCE
T ss_pred eeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEE
Confidence 344558999999999999889999999999999999999876422111 11246999999999999 77899
Q ss_pred EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCC--CEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 239 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEP--GVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 239 ~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~--~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
++++.|+.|++|++.++ .+...+. +...+.++.|+|.++ .++++|+.+|.|++||+.++. ....+.
T Consensus 116 ~s~~~d~~i~iwd~~~~-------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~----~~~~~~ 183 (408)
T 4a11_B 116 TSSSFDKTLKVWDTNTL-------QTADVFN-FEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGS----CSHILQ 183 (408)
T ss_dssp EEEETTSEEEEEETTTT-------EEEEEEE-CSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSC----CCEEEC
T ss_pred EEEeCCCeEEEeeCCCC-------ccceecc-CCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcc----eeeeec
Confidence 99999999999999874 4555554 778899999999653 389999999999999999876 567788
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc------------eeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC------------MLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~------------~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
+|...|.+++|+|+++++|++++.||.|++||++....... .......|...|.+++|+|++++|++|
T Consensus 184 ~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 263 (408)
T 4a11_B 184 GHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTV 263 (408)
T ss_dssp CCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEE
T ss_pred CCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEe
Confidence 89999999999999997899999999999999986431111 111115788999999999999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCC----CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHT----APVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.||.|++||++. +.....+..+. .....+.+.......+++++.++.|++||+...
T Consensus 264 ~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~ 324 (408)
T 4a11_B 264 GTDNRMRLWNSSN---GENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSG 324 (408)
T ss_dssp ETTSCEEEEETTT---CCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTC
T ss_pred cCCCeEEEEECCC---CccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCC
Confidence 9999999999985 33322222211 111112222222346777778899999998765
No 81
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.6e-33 Score=302.83 Aligned_cols=290 Identities=22% Similarity=0.340 Sum_probs=235.2
Q ss_pred CCCCCee--eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 221 GHTNSAE--DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 221 ~h~~~V~--~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+|...+. +++|+ +..+++++.++.|++|++.++ .....+.. |...|.+++|+|++ .+|++|+.||.|
T Consensus 89 ~~~~~~~~~~~~~s--~~~l~~~~~d~~v~lw~~~~~-------~~~~~~~~~~~~~v~~v~~s~~~-~~l~~~~~dg~i 158 (401)
T 4aez_A 89 GIIDDYYLNLLDWS--NLNVVAVALERNVYVWNADSG-------SVSALAETDESTYVASVKWSHDG-SFLSVGLGNGLV 158 (401)
T ss_dssp TCCCCTTCBCEEEC--TTSEEEEEETTEEEEEETTTC-------CEEEEEECCTTCCEEEEEECTTS-SEEEEEETTSCE
T ss_pred CCcCCceEEEEeec--CCCEEEEECCCeEEEeeCCCC-------cEeEeeecCCCCCEEEEEECCCC-CEEEEECCCCeE
Confidence 4555444 45555 467899999999999999885 44455544 88999999999998 899999999999
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
++||+.++. ....+.+|...|.+++|++ . +|++++.||.|++||++... ..+..+ ..|...|.+++|+|+
T Consensus 159 ~iwd~~~~~----~~~~~~~~~~~v~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~--~~~~~~-~~~~~~v~~~~~~~~ 228 (401)
T 4aez_A 159 DIYDVESQT----KLRTMAGHQARVGCLSWNR--H-VLSSGSRSGAIHHHDVRIAN--HQIGTL-QGHSSEVCGLAWRSD 228 (401)
T ss_dssp EEEETTTCC----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTT
T ss_pred EEEECcCCe----EEEEecCCCCceEEEEECC--C-EEEEEcCCCCEEEEecccCc--ceeeEE-cCCCCCeeEEEEcCC
Confidence 999999887 5667789999999999953 4 79999999999999998532 234444 789999999999999
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE--CCCCEEEEEcCCCCchhHHHhhhh
Q psy4510 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG--ADDQIALWDLAVERDSEIEQREAE 455 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~ 455 (812)
+++|++|+.||.|++||++ ...++..+..|...|.+++|+|++..++++++ .|+.|++||+.+.+.
T Consensus 229 ~~~l~s~~~d~~v~iwd~~---~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~--------- 296 (401)
T 4aez_A 229 GLQLASGGNDNVVQIWDAR---SSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGAR--------- 296 (401)
T ss_dssp SSEEEEEETTSCEEEEETT---CSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCE---------
T ss_pred CCEEEEEeCCCeEEEccCC---CCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCE---------
Confidence 9999999999999999998 46788889999999999999998888888876 799999999976521
Q ss_pred hccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 456 LKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 456 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
...
T Consensus 297 --------~~~--------------------------------------------------------------------- 299 (401)
T 4aez_A 297 --------VNT--------------------------------------------------------------------- 299 (401)
T ss_dssp --------EEE---------------------------------------------------------------------
T ss_pred --------EEE---------------------------------------------------------------------
Confidence 000
Q ss_pred CCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEE
Q psy4510 536 SGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGI 615 (812)
Q Consensus 536 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~i 615 (812)
..+...|.+++|+|+++.+++++++.||.|++
T Consensus 300 ------------------------------------------------~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v 331 (401)
T 4aez_A 300 ------------------------------------------------VDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSI 331 (401)
T ss_dssp ------------------------------------------------EECSSCEEEEEECSSSSEEEEEECTTTCEEEE
T ss_pred ------------------------------------------------EeCCCcEEEEEECCCCCeEEEEeecCCCcEEE
Confidence 00122577888999999999865468999999
Q ss_pred EeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce
Q psy4510 616 WDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 691 (812)
Q Consensus 616 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~ 691 (812)
|++.++... ....+.+|...|++++|+| ++.+|++++.||.|++|++.+++.
T Consensus 332 ~~~~~~~~~-----------------------~~~~~~~h~~~v~~~~~s~-dg~~l~s~~~dg~i~iw~~~~~~~ 383 (401)
T 4aez_A 332 WSYSSSGLT-----------------------KQVDIPAHDTRVLYSALSP-DGRILSTAASDENLKFWRVYDGDH 383 (401)
T ss_dssp EEEETTEEE-----------------------EEEEEECCSSCCCEEEECT-TSSEEEEECTTSEEEEEECCC---
T ss_pred EecCCccce-----------------------eEEEecCCCCCEEEEEECC-CCCEEEEEeCCCcEEEEECCCCcc
Confidence 999886421 3455789999999999999 788899999888888888876544
No 82
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=5.2e-33 Score=302.31 Aligned_cols=286 Identities=20% Similarity=0.347 Sum_probs=233.7
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
.++.|+||+. +.|++| .|++|+|||..++ ....+..+.+|...|++|+|+|++ .+|++|+.||+|+|||+.+
T Consensus 107 y~~~l~wS~~-n~lAvg-ld~tV~lWd~~tg-----~~~~~~~~~~~~~~V~sv~fspdg-~~lasgs~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVA-LDNSVYLWSASSG-----DILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEE-ETTEEEEEETTTC-----CEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEE-eCCEEEEEECCCC-----CEEEEEEecCCCCcEEEEEECCCC-CEEEEEECCCeEEEEEcCC
Confidence 4678999975 466665 5999999999986 222333455788899999999999 8999999999999999998
Q ss_pred CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 305 AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 305 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
+. ....+.+|...+.+++|++ . +|++|+.|+.+++||.+... ..+..+ .+|...+..+.|+|++++++++
T Consensus 179 ~~----~~~~~~~h~~~v~~~s~~~--~-~l~sgs~d~~i~~~d~~~~~--~~~~~~-~~h~~~~~~~~~~~~g~~l~s~ 248 (420)
T 4gga_A 179 QK----RLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLASG 248 (420)
T ss_dssp TE----EEEEECCCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEEE
T ss_pred Cc----EEEEEeCCCCceEEEeeCC--C-EEEEEeCCCceeEeeecccc--eeeEEe-cccccceeeeeecCCCCeeeee
Confidence 86 5677889999999998864 4 79999999999999998532 334444 7899999999999999999999
Q ss_pred eCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEEEEE--CCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 385 GDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFASGG--ADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
+.||.+++|+.+.... ...+.....|...|.+++|+|.+..++++++ .|++|++||+.+...
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~--------------- 313 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC--------------- 313 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEE---------------
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcccc---------------
Confidence 9999999999985322 2356778889999999999999888887754 699999999976621
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 541 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~ 541 (812)
....
T Consensus 314 --~~~~-------------------------------------------------------------------------- 317 (420)
T 4gga_A 314 --LSAV-------------------------------------------------------------------------- 317 (420)
T ss_dssp --EEEE--------------------------------------------------------------------------
T ss_pred --ceee--------------------------------------------------------------------------
Confidence 1000
Q ss_pred EEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEecccc
Q psy4510 542 RTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTA 621 (812)
Q Consensus 542 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~ 621 (812)
.+...+.++.|+++++.+++++++.||.|+|||+.++
T Consensus 318 -------------------------------------------~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 318 -------------------------------------------DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp -------------------------------------------ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTC
T ss_pred -------------------------------------------ccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCC
Confidence 0012466777888888898887678999999999987
Q ss_pred ccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 622 LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 622 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
. ++.++.||.+.|++|+|+| ++.+||||+.|++|+|||+..
T Consensus 355 ~-------------------------~v~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv~~ 395 (420)
T 4gga_A 355 A-------------------------KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFE 395 (420)
T ss_dssp C-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSC
T ss_pred c-------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCC
Confidence 6 7889999999999999999 788999999999998888753
No 83
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=1.6e-33 Score=301.35 Aligned_cols=310 Identities=16% Similarity=0.168 Sum_probs=242.7
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.|.++|++++|+| ++++||+|+.||.|+|||+.+++. .....+.+|...|.+++|+|++++|++++.|+.|++|++.
T Consensus 6 ~~~~~i~~~~~s~-~~~~l~~~~~d~~v~i~~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~ 82 (372)
T 1k8k_C 6 FLVEPISCHAWNK-DRTQIAICPNNHEVHIYEKSGNKW--VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLK 82 (372)
T ss_dssp SCSSCCCEEEECT-TSSEEEEECSSSEEEEEEEETTEE--EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEE
T ss_pred ccCCCeEEEEECC-CCCEEEEEeCCCEEEEEeCCCCcE--EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECC
Confidence 5889999999999 999999999999999999987641 1456677999999999999999999999999999999998
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
++ ...+...+.+|...|.+++|+|++ .+|++|+.||.|++|++.....+........+|...|.+++|+|++.
T Consensus 83 ~~-----~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~- 155 (372)
T 1k8k_C 83 GR-----TWKPTLVILRINRAARCVRWAPNE-KKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSV- 155 (372)
T ss_dssp TT-----EEEEEEECCCCSSCEEEEEECTTS-SEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSS-
T ss_pred CC-----eeeeeEEeecCCCceeEEEECCCC-CEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCC-
Confidence 74 123344557899999999999998 89999999999999999987644333444567899999999999998
Q ss_pred EEEEEECCCeEEEEECCCC---------------CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVI---------------NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~---------------~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
+|++++.||.|++||++.. ....++..+ ..|...|.+++|+|++++|++++.||.|++||++
T Consensus 156 ~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~-- 232 (372)
T 1k8k_C 156 LLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES-SSSCGWVHGVCFSANGSRVAWVSHDSTVCLADAD-- 232 (372)
T ss_dssp EEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC-CCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGG--
T ss_pred EEEEEcCCCCEEEEEcccccccccccccccccccchhhheEec-CCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECC--
Confidence 6999999999999997521 123445555 6899999999999999999999999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC--CCchhH--------H-------HhhhhhccCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV--ERDSEI--------E-------QREAELKDLPS 461 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~--~~~~~~--------~-------~~~~~~~~~~~ 461 (812)
.++.+..+..|..+|.+++|+|++ .+|+++ .|+.|++|++.. +.-... . ...-...+...
T Consensus 233 -~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (372)
T 1k8k_C 233 -KKMAVATLASETLPLLAVTFITES-SLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKA 309 (372)
T ss_dssp -GTTEEEEEECSSCCEEEEEEEETT-EEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC
T ss_pred -CCceeEEEccCCCCeEEEEEecCC-CEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccc
Confidence 467889999999999999999986 566666 899999999987 210000 0 00000000000
Q ss_pred ce-------EEe-ecCCCceeEEEEcCCCC---CEEEEEeCCCeEEEEe
Q psy4510 462 QL-------LFI-HLGQKEIKELHWHPQLP---GTIISTANSGFNIFRT 499 (812)
Q Consensus 462 ~~-------~~~-~~~~~~v~~~~~~p~~~---~~~~~~~~~~~~~~~~ 499 (812)
.. ... ..+...|.+++|++... .++++++.|+...+|.
T Consensus 310 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~W~ 358 (372)
T 1k8k_C 310 SSEGSAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWD 358 (372)
T ss_dssp ---------CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEEEE
T ss_pred ccccCccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEEEE
Confidence 11 111 24456899999886654 6888888777544443
No 84
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-33 Score=289.78 Aligned_cols=288 Identities=17% Similarity=0.247 Sum_probs=240.9
Q ss_pred CCCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF 245 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~ 245 (812)
.+.+..+.+|.+.|++++| | ++++||+|+.||.|+|||+.+.. ....+..|...|.+++|+|++++|++++.++
T Consensus 8 ~~~~~~l~~h~~~v~~~~~-~-~~~~l~s~~~dg~v~vw~~~~~~----~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATLKGHDQDVRDVVA-V-DDSKVASVSRDGTVRLWSKDDQW----LGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CEEEEEECCCSSCEEEEEE-E-ETTEEEEEETTSEEEEEEESSSE----EEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred HHHHHHhhCCCCCcEEEEe-c-CCCEEEEEEcCCcEEEEECCCCE----EEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 4566677899999999999 8 99999999999999999997765 5667788999999999999999999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
.+++|++.... ..+++..+.+|...|.+++|. + .+|++|+.||.|++|| ... ....+..|...|.++
T Consensus 82 ~i~~~~~~~~~----~~~~~~~~~~~~~~i~~~~~~--~-~~l~~~~~d~~i~~~d--~~~----~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 82 MINGVPLFATS----GEDPLYTLIGHQGNVCSLSFQ--D-GVVISGSWDKTAKVWK--EGS----LVYNLQAHNASVWDA 148 (313)
T ss_dssp CEEEEETTCCT----TSCC-CEECCCSSCEEEEEEE--T-TEEEEEETTSEEEEEE--TTE----EEEEEECCSSCEEEE
T ss_pred eEEEEEeeecC----CCCcccchhhcccCEEEEEec--C-CEEEEEeCCCCEEEEc--CCc----EEEecccCCCceeEE
Confidence 99999998742 346678899999999999993 4 7999999999999999 332 456677899999999
Q ss_pred EEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 326 QWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 326 ~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
+|.| ++. +|++++.||.|++||.. .....+...|...|.+++|+|++. +++|+.||.|++||++ .++.+
T Consensus 149 ~~~~~~~~-~l~~~~~d~~i~i~d~~-----~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~i~i~d~~---~~~~~ 218 (313)
T 3odt_A 149 KVVSFSEN-KFLTASADKTIKLWQND-----KVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGLIKLVDMH---TGDVL 218 (313)
T ss_dssp EEEETTTT-EEEEEETTSCEEEEETT-----EEEEEECSSCSSCEEEEEEEETTE-EEEEETTSEEEEEETT---TCCEE
T ss_pred EEccCCCC-EEEEEECCCCEEEEecC-----ceEEEEeccCcccEEEEEEcCCCe-EEEccCCCeEEEEECC---chhhh
Confidence 9998 555 79999999999999943 234555345899999999999997 9999999999999998 56788
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
..+..|...|++++|+|++ .|++++.||.|++||+...+ .......+...|.+++|+|++.
T Consensus 219 ~~~~~~~~~i~~~~~~~~~--~l~~~~~dg~v~iwd~~~~~----------------~~~~~~~~~~~i~~~~~~~~~~- 279 (313)
T 3odt_A 219 RTYEGHESFVYCIKLLPNG--DIVSCGEDRTVRIWSKENGS----------------LKQVITLPAISIWSVDCMSNGD- 279 (313)
T ss_dssp EEEECCSSCEEEEEECTTS--CEEEEETTSEEEEECTTTCC----------------EEEEEECSSSCEEEEEECTTSC-
T ss_pred hhhhcCCceEEEEEEecCC--CEEEEecCCEEEEEECCCCc----------------eeEEEeccCceEEEEEEccCCC-
Confidence 9999999999999999987 48899999999999998874 2233334455899999999976
Q ss_pred EEEEEeCCCeEEEEeCC
Q psy4510 485 TIISTANSGFNIFRTIS 501 (812)
Q Consensus 485 ~~~~~~~~~~~~~~~~~ 501 (812)
+++++.++.+.+|+...
T Consensus 280 ~~~~~~dg~i~iw~~~~ 296 (313)
T 3odt_A 280 IIVGSSDNLVRIFSQEK 296 (313)
T ss_dssp EEEEETTSCEEEEESCG
T ss_pred EEEEeCCCcEEEEeCCC
Confidence 55544455566666543
No 85
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=5.6e-33 Score=295.33 Aligned_cols=307 Identities=17% Similarity=0.246 Sum_probs=232.8
Q ss_pred CCCCCceEEEEeCCCCCC-eEEEecC---CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC---CCcEEEeeCCC
Q psy4510 173 SGHLTEGFAMDWSSTEPG-VLATGDC---KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL---KTALQTVDDPF 245 (812)
Q Consensus 173 ~gh~~~i~~~~~sp~~~~-~lat~~~---dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~d~ 245 (812)
.+|.+.|++++|+| ++. ++++|+. ||.|+||++.+++. ......+|..+|.+++|+|+ +++|++++.|+
T Consensus 15 ~~h~~~v~~~~~~p-~~~~l~~~~s~~~~d~~v~iw~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 90 (357)
T 3i2n_A 15 KGFNYTVFDCKWVP-CSAKFVTMGNFARGTGVIQLYEIQHGDL---KLLREIEKAKPIKCGTFGATSLQQRYLATGDFGG 90 (357)
T ss_dssp EECSSCEEEEEECT-TSSEEEEEEC--CCCEEEEEEEECSSSE---EEEEEEEESSCEEEEECTTCCTTTCCEEEEETTS
T ss_pred cCCCCceEEEEEcC-CCceEEEecCccCCCcEEEEEeCCCCcc---cceeeecccCcEEEEEEcCCCCCCceEEEecCCC
Confidence 47999999999999 775 6667776 99999999998763 22233479999999999999 69999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEe------cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW------SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~------sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
.|++|++.++ ..++..+.+|...|.+++| +|++ .+|++|+.||.|++||+.++.. ....+..|.
T Consensus 91 ~i~iwd~~~~------~~~~~~~~~~~~~v~~~~~~~~~~~s~~~-~~l~~~~~d~~i~vwd~~~~~~---~~~~~~~~~ 160 (357)
T 3i2n_A 91 NLHIWNLEAP------EMPVYSVKGHKEIINAIDGIGGLGIGEGA-PEIVTGSRDGTVKVWDPRQKDD---PVANMEPVQ 160 (357)
T ss_dssp CEEEECTTSC------SSCSEEECCCSSCEEEEEEESGGGCC-CC-CEEEEEETTSCEEEECTTSCSS---CSEEECCCT
T ss_pred eEEEEeCCCC------CccEEEEEecccceEEEeeccccccCCCc-cEEEEEeCCCeEEEEeCCCCCC---cceeccccC
Confidence 9999999985 2488999999999999965 6777 7999999999999999998753 233333333
Q ss_pred ----CCEEEEE----EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC---CCCEEEEEeCCC
Q psy4510 320 ----NSVEDLQ----WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR---TEPLIVSGGDDG 388 (812)
Q Consensus 320 ----~~v~~~~----~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~~l~sg~~dg 388 (812)
..|.+++ |+|++. +|++++.||.|++||++... .. .. ..|...|.+++|+| ++.+|++|+.||
T Consensus 161 ~~~~~~v~~~~~~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~---~~-~~-~~~~~~v~~~~~~~~~~~~~~l~~~~~dg 234 (357)
T 3i2n_A 161 GENKRDCWTVAFGNAYNQEER-VVCAGYDNGDIKLFDLRNMA---LR-WE-TNIKNGVCSLEFDRKDISMNKLVATSLEG 234 (357)
T ss_dssp TSCCCCEEEEEEECCCC-CCC-EEEEEETTSEEEEEETTTTE---EE-EE-EECSSCEEEEEESCSSSSCCEEEEEESTT
T ss_pred CCCCCceEEEEEEeccCCCCC-EEEEEccCCeEEEEECccCc---ee-ee-cCCCCceEEEEcCCCCCCCCEEEEECCCC
Confidence 3899998 678888 69999999999999998533 22 22 57889999999999 889999999999
Q ss_pred cEEEEecCCCCCCCceE--EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCC---Cce
Q psy4510 389 CIHVWDLRRFKKGSSVA--TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLP---SQL 463 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~--~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~---~~~ 463 (812)
.|++||++.......+. .+..|...|++++|+|++..+|++++.||.|++||+..................+ ..+
T Consensus 235 ~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~ 314 (357)
T 3i2n_A 235 KFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLL 314 (357)
T ss_dssp EEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEE
T ss_pred eEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCcccccccccee
Confidence 99999998533222222 3448999999999999975589999999999999998764321100000000000 123
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEe
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRT 499 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~ 499 (812)
.....+...|.+++|+|+++.++++++.++ +.+|+.
T Consensus 315 ~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~ 351 (357)
T 3i2n_A 315 QNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIV 351 (357)
T ss_dssp EEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred eccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEEC
Confidence 333445568999999999988876677665 455554
No 86
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=3.3e-32 Score=280.80 Aligned_cols=260 Identities=18% Similarity=0.285 Sum_probs=207.8
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCK 294 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~d 294 (812)
..+.+|...|++++|+|+|++|++++.|++|++|++... ..+++.++.+|.+.|.+++|+|+ + .+|++|+.|
T Consensus 3 ~~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~-----~~~~~~~l~gH~~~V~~v~~s~~~~g-~~l~s~s~D 76 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGE-----THKLIDTLTGHEGPVWRVDWAHPKFG-TILASCSYD 76 (297)
T ss_dssp EECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSS-----CBCCCEEECCCSSCEEEEEECCGGGC-SEEEEEETT
T ss_pred eeccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCC-----CcEEEEEEccccCCeEEEEecCCCcC-CEEEEEcCC
Confidence 457799999999999999999999999999999999753 23678899999999999999864 5 799999999
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
++|++||+.++.. .....+.+|...|.+++|+|+ +. +|++++.||.|++||++...... ...+ .+|...|+++
T Consensus 77 ~~v~iWd~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~g~-~l~s~s~d~~v~~wd~~~~~~~~-~~~~-~~h~~~v~~~ 151 (297)
T 2pm7_B 77 GKVMIWKEENGRW--SQIAVHAVHSASVNSVQWAPHEYGP-MLLVASSDGKVSVVEFKENGTTS-PIII-DAHAIGVNSA 151 (297)
T ss_dssp TEEEEEEBSSSCB--CCCEEECCCSSCEEEEEECCGGGCS-EEEEEETTSEEEEEEBCSSSCBC-CEEE-ECCSSCEEEE
T ss_pred CEEEEEEcCCCce--EEEEEeecCCCceeEEEeCcCCCCc-EEEEEECCCcEEEEEecCCCcee-eeee-ecccCccceE
Confidence 9999999987641 124456789999999999997 66 79999999999999998643221 2333 6899999999
Q ss_pred EEcCC-------------CCEEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCC--CcEEEEEECCCCE
Q psy4510 373 SWNRT-------------EPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTE--SSTFASGGADDQI 436 (812)
Q Consensus 373 ~~~~~-------------~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~v 436 (812)
+|+|+ +++|++|+.|+.|++||++.... ......+.+|...|.+++|+|++ ..+|++++.|++|
T Consensus 152 ~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v 231 (297)
T 2pm7_B 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTC 231 (297)
T ss_dssp EECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCE
T ss_pred eecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcE
Confidence 99997 46999999999999999974211 11456788999999999999985 4799999999999
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEe--ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFI--HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
++||+...... ...... ..+...|.+++|+|++..++.++.++.+.+|...
T Consensus 232 ~iWd~~~~~~~-------------~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~ 284 (297)
T 2pm7_B 232 IIWTQDNEQGP-------------WKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKEN 284 (297)
T ss_dssp EEEEESSTTSC-------------CEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEEC
T ss_pred EEEEeCCCCCc-------------cceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEEC
Confidence 99999764210 011111 2334579999999998766555555567777654
No 87
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=8.2e-34 Score=310.91 Aligned_cols=258 Identities=13% Similarity=0.141 Sum_probs=204.7
Q ss_pred CCccCc-CCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEeeCC
Q psy4510 167 PPLFSF-SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVDDP 244 (812)
Q Consensus 167 ~~i~~~-~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~~d 244 (812)
+.+.++ .+|.+.|++++|+|.++++||||+.||+|+|||+.+........ ....+|...|++++|+|++++|++++.|
T Consensus 53 ~~~~~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d 132 (437)
T 3gre_A 53 KLIATLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKD 132 (437)
T ss_dssp CEEEEECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred eEEeeeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 456666 78999999999999788999999999999999987621111111 1222699999999999999999999999
Q ss_pred CceEEeeCC---CCCCCCCCCCCceEEcC------------CCCcEEEEE--ecCCCCCEEEEEeCCCcEEEEeCCCCCc
Q psy4510 245 FQLAEHNKK---RGKGPGIPTPPLFSFSG------------HLTEGFAMD--WSSTEPGVLATGDCKRNIHIWTPREAGA 307 (812)
Q Consensus 245 ~~i~vwd~~---~~~~~~~~~~~~~~~~~------------h~~~v~~l~--~sp~~~~~l~sg~~dg~i~vwd~~~~~~ 307 (812)
+.|++|++. .+ +.+..+.+ +...+.++. +++++ .+|++|+.||.|++||+.++.
T Consensus 133 g~i~vwd~~~~~~~-------~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~~~d~~i~iwd~~~~~- 203 (437)
T 3gre_A 133 GQIIVLKVNHYQQE-------SEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEK-SLLVALTNLSRVIIFDIRTLE- 203 (437)
T ss_dssp SEEEEEEEEEEEET-------TEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSC-EEEEEEETTSEEEEEETTTCC-
T ss_pred CEEEEEEeccccCC-------ceeeccccceeEEEEccCcccccCceEEEEEEcCCC-CEEEEEeCCCeEEEEeCCCCe-
Confidence 999999995 32 33333332 344555555 45666 799999999999999999887
Q ss_pred ceeccccccC--CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC----CCCEE
Q psy4510 308 WQVDQKPLVG--HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR----TEPLI 381 (812)
Q Consensus 308 ~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~----~~~~l 381 (812)
....+.+ |...|++++|+|++. +|++|+.||.|++||++. ..++..+...|...|++++|+| ++.+|
T Consensus 204 ---~~~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l 276 (437)
T 3gre_A 204 ---RLQIIENSPRHGAVSSICIDEECC-VLILGTTRGIIDIWDIRF---NVLIRSWSFGDHAPITHVEVCQFYGKNSVIV 276 (437)
T ss_dssp ---EEEEEECCGGGCCEEEEEECTTSC-EEEEEETTSCEEEEETTT---TEEEEEEBCTTCEEEEEEEECTTTCTTEEEE
T ss_pred ---eeEEEccCCCCCceEEEEECCCCC-EEEEEcCCCeEEEEEcCC---ccEEEEEecCCCCceEEEEeccccCCCccEE
Confidence 4566666 889999999999988 699999999999999984 4555655447788999996665 56699
Q ss_pred EEEeCCCcEEEEecCCCCCCCceEEccc--------------------------CCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 382 VSGGDDGCIHVWDLRRFKKGSSVATFKH--------------------------HTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 382 ~sg~~dg~i~iwd~~~~~~~~~~~~~~~--------------------------h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
++|+.||.|++||++. ++.+..+.+ |...|++++|+ ++ .+|++|+.|+.
T Consensus 277 ~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-~~l~s~~~d~~ 351 (437)
T 3gre_A 277 VGGSSKTFLTIWNFVK---GHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-KILLTDEATSS 351 (437)
T ss_dssp EEESTTEEEEEEETTT---TEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT-EEEEEEGGGTE
T ss_pred EEEcCCCcEEEEEcCC---CcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc-eEEEecCCCCe
Confidence 9999999999999984 444554443 55668888998 44 69999999999
Q ss_pred EEEEEcCCCC
Q psy4510 436 IALWDLAVER 445 (812)
Q Consensus 436 v~iwd~~~~~ 445 (812)
|++||+...+
T Consensus 352 i~~wd~~~~~ 361 (437)
T 3gre_A 352 IVMFSLNELS 361 (437)
T ss_dssp EEEEETTCGG
T ss_pred EEEEECCCcc
Confidence 9999998774
No 88
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=3.4e-32 Score=284.18 Aligned_cols=283 Identities=20% Similarity=0.340 Sum_probs=230.3
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE--cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF--SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~--~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
.++|+||+++ .||+| .|++|+|||+.++ +.+..+ .+|...|.+++|+|++ .+|++|+.||+|++|++.
T Consensus 28 ~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg-------~~~~~~~~~~~~~~V~~v~~~~~~-~~l~sgs~Dg~v~iw~~~ 97 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVA-LDNSVYLWSASSG-------DILQLLQMEQPGEYISSVAWIKEG-NYLAVGTSSAEVQLWDVQ 97 (318)
T ss_dssp CBCEEECTTS-EEEEE-ETTEEEEEETTTC-------CEEEEEECCSTTCCEEEEEECTTS-SEEEEEETTSEEEEEETT
T ss_pred ceEEEECCCC-EEEEE-eCCEEEEEECCCC-------CEEEEEEecCCCCeEEEEEECCCC-CEEEEEECCCcEEEeecC
Confidence 5789999886 56655 5999999999986 545544 5788899999999999 899999999999999999
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
+++ ....+.+|...+.++.+.+ . ++++++.++.+++|+..... ..+..+ .+|...+.++.+++++++|++
T Consensus 98 ~~~----~~~~~~~h~~~~~~~~~~~--~-~l~s~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~l~s 167 (318)
T 4ggc_A 98 QQK----RLRNMTSHSARVGSLSWNS--Y-ILSSGSRSGHIHHHDVRVAE--HHVATL-SGHSQEVCGLRWAPDGRHLAS 167 (318)
T ss_dssp TTE----EEEEEECCSSCEEEEEEET--T-EEEEEETTSEEEEEETTSSS--CEEEEE-ECCSSCEEEEEECTTSSEEEE
T ss_pred Cce----eEEEecCccceEEEeecCC--C-EEEEEecCCceEeeecCCCc--eeEEEE-cCccCceEEEEEcCCCCEEEE
Confidence 887 5677889999888877654 4 79999999999999988532 233444 789999999999999999999
Q ss_pred EeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEE--EEECCCCEEEEEcCCCCchhHHHhhhhhccCC
Q psy4510 384 GGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFA--SGGADDQIALWDLAVERDSEIEQREAELKDLP 460 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~--s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 460 (812)
++.||.|++||++..+. .........|.+.|.++.++|.+..++. +++.++.|++||......
T Consensus 168 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~-------------- 233 (318)
T 4ggc_A 168 GGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGAC-------------- 233 (318)
T ss_dssp EETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCE--------------
T ss_pred EecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccc--------------
Confidence 99999999999985332 2345566778899999999998877664 455688999999876521
Q ss_pred CceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceE
Q psy4510 461 SQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 540 (812)
Q Consensus 461 ~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~ 540 (812)
..
T Consensus 234 ---~~--------------------------------------------------------------------------- 235 (318)
T 4ggc_A 234 ---LS--------------------------------------------------------------------------- 235 (318)
T ss_dssp ---EE---------------------------------------------------------------------------
T ss_pred ---cc---------------------------------------------------------------------------
Confidence 00
Q ss_pred EEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccc
Q psy4510 541 FRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKT 620 (812)
Q Consensus 541 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~ 620 (812)
...+...+..+.|+|+++.+++++++.|+.|++||+.+
T Consensus 236 ------------------------------------------~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 236 ------------------------------------------AVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp ------------------------------------------EEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ------------------------------------------cccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 01112256677888888888887667899999999998
Q ss_pred cccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 621 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 621 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
+. ++.++.+|.+.|++++|+| ++.+|||||.||+|+|||+..
T Consensus 274 ~~-------------------------~~~~l~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 274 MA-------------------------KVAELKGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFE 315 (318)
T ss_dssp CC-------------------------EEEEECCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSC
T ss_pred Cc-------------------------EEEEEcCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCC
Confidence 76 7889999999999999999 788999999999999999854
No 89
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.8e-34 Score=304.90 Aligned_cols=265 Identities=9% Similarity=0.085 Sum_probs=199.3
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.-...|.+++||| ||+++||++.|++|+ |... .+.+.+|...|.+++|+|+| .++.+.+|+.+
T Consensus 13 ~~~~~v~sv~~Sp-DG~~iASas~D~TV~--d~~~-------~~~l~gh~~~v~~V~FsPdg-------~~~~~~~~~~~ 75 (588)
T 2j04_A 13 EFEDWKNNLTWAR-DGTLYLTTFPDISIG--QPKY-------AKDINCNSKNLFHVKEFPLE-------FENKLDFELAQ 75 (588)
T ss_dssp CCSSSSCCEEECT-TSCEEEECSSSEEEE--EECC-------CSCCSSBGGGTEEEEEECCC-------CCCTTTTSCCC
T ss_pred HhhccEEEEEECC-CCCEEEEEcCCceee--cccc-------cceecCCCccEEEEEECCCC-------CcceEEEEeCC
Confidence 4457789999999 999999999999999 5333 23457999999999999999 45555555433
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-----CEEEEEEc
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN-----SVEDLQWS 328 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~-----~v~~~~~~ 328 (812)
. ..+.++ +|...|.+++|||+| .+||+++.||.|++|+... ....+. |.. .|.+++|+
T Consensus 76 ~--------~~~~~~-~~~~~V~~vawSPdG-~~LAs~s~dg~V~iwd~~~------~l~~l~-~~~~~~~~sv~svafS 138 (588)
T 2j04_A 76 Q--------NGLLNS-QPVCYPRVCKPSPID-DWMAVLSNNGNVSVFKDNK------MLTNLD-SKGNLSSRTYHCFEWN 138 (588)
T ss_dssp S--------SCSSTT-SCSCCEEEEEECSSS-SCEEEEETTSCEEEEETTE------EEEECC-CSSCSTTTCEEEEEEC
T ss_pred C--------ceEeec-CCCCcEEEEEECCCC-CEEEEEeCCCcEEEEeCCc------eeeecc-CCCccccccEEEEEEc
Confidence 2 222222 458899999999999 8999999999999999543 233344 554 59999999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCccc----ceeec---CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKS----CMLTL---PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG 401 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~----~~~~~---~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~ 401 (812)
|+|+ +||+|+.||+|+|||+..+.... .+.++ ..+|...|.+++|+|+| +++++.|+.|++||+......
T Consensus 139 PDG~-~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~ 215 (588)
T 2j04_A 139 PIES-SIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQ 215 (588)
T ss_dssp SSSS-CEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSC
T ss_pred CCCC-EEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCccc
Confidence 9999 69999999999999998643211 12333 26688999999999999 888899999999999752211
Q ss_pred CceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce-EEeecCCCceeEEEE-
Q psy4510 402 SSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL-LFIHLGQKEIKELHW- 478 (812)
Q Consensus 402 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~v~~~~~- 478 (812)
....++ .+|...|.+++|+ + +.||+++ +++|++||+... +. .+...+...|..+.|
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g-~~LASa~-~~tIkLWd~~~~-----------------~~~~~~~gh~~~V~~va~~ 274 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--D-YKVVLTC-PGYVHKIDLKNY-----------------SISSLKTGSLENFHIIPLN 274 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--T-TEEEEEC-SSEEEEEETTTT-----------------EEEEEECSCCSCCCEEEET
T ss_pred cceeeecccccCcEEEEEEE--C-CEEEEEe-CCeEEEEECCCC-----------------eEEEEEcCCCceEEEEEee
Confidence 134566 4788999999999 4 6888887 699999999877 33 334355567888888
Q ss_pred -cCCCCCEEEEEeCCCeEEE
Q psy4510 479 -HPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 479 -~p~~~~~~~~~~~~~~~~~ 497 (812)
+|++ ..++++..+|..+|
T Consensus 275 ~s~d~-~~La~a~edG~klw 293 (588)
T 2j04_A 275 HEKES-TILLMSNKTSYKVL 293 (588)
T ss_dssp TCSSC-EEEEECSSCEEEEE
T ss_pred eCCCC-CEEEEEcCCCCEEE
Confidence 7775 24444444444343
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=3.1e-32 Score=296.16 Aligned_cols=242 Identities=20% Similarity=0.386 Sum_probs=200.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
+..++||+ + ++||+|. |++|+|||+.+++.. ....+.+|...|++|+|+|+|++|++|+.|+.|++|++.++
T Consensus 108 ~~~l~wS~-~-n~lAvgl-d~tV~lWd~~tg~~~--~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~--- 179 (420)
T 4gga_A 108 LNLVDWSS-G-NVLAVAL-DNSVYLWSASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--- 179 (420)
T ss_dssp CBCEEECT-T-SEEEEEE-TTEEEEEETTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTT---
T ss_pred ceeEEECC-C-CEEEEEe-CCEEEEEECCCCCEE--EEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCC---
Confidence 45699998 5 5888886 899999999988732 23345688899999999999999999999999999999985
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+++..+.+|...+.+++|++ .+|++|+.|+.+++|+...... ....+.+|...+..+.|+|++. +++++
T Consensus 180 ----~~~~~~~~h~~~v~~~s~~~---~~l~sgs~d~~i~~~d~~~~~~---~~~~~~~h~~~~~~~~~~~~g~-~l~s~ 248 (420)
T 4gga_A 180 ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLRWAPDGR-HLASG 248 (420)
T ss_dssp ----EEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred ----cEEEEEeCCCCceEEEeeCC---CEEEEEeCCCceeEeeecccce---eeEEecccccceeeeeecCCCC-eeeee
Confidence 78899999999999999875 6899999999999999987653 4566789999999999999999 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEE--eCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSG--GDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg--~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+.|+.|++|+.+..............|...|.+++|+|.+. +++++ +.|+.|++||++ .+..+..+.. ...+.
T Consensus 249 ~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~---t~~~~~~~~~-~~~v~ 324 (420)
T 4gga_A 249 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVC---SGACLSAVDA-HSQVC 324 (420)
T ss_dssp ETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETT---TTEEEEEEEC-SSCEE
T ss_pred eccccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCC---ccccceeecc-cccee
Confidence 99999999999865443333333378899999999999875 66654 579999999998 4666666664 45789
Q ss_pred EEEEccCCCcEEEEEE--CCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGG--ADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~--~dg~v~iwd~~~~ 444 (812)
++.|+|++. .+++++ .|+.|++||+.+.
T Consensus 325 ~~~~~~~~~-~lv~~sg~~d~~I~iwd~~~~ 354 (420)
T 4gga_A 325 SILWSPHYK-ELISGHGFAQNQLVIWKYPTM 354 (420)
T ss_dssp EEEEETTTT-EEEEEECTTTCCEEEEETTTC
T ss_pred eeeecCCCC-eEEEEEecCCCEEEEEECCCC
Confidence 999999975 555543 6899999998765
No 91
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=1.8e-32 Score=291.16 Aligned_cols=295 Identities=11% Similarity=0.058 Sum_probs=216.6
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCC-------ceEEeeCCCCCCCCC---CCCCceEEcCCCCcEEEEEecCCCCCEEEEE-
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPF-------QLAEHNKKRGKGPGI---PTPPLFSFSGHLTEGFAMDWSSTEPGVLATG- 291 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~-------~i~vwd~~~~~~~~~---~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg- 291 (812)
..||++++|+|++++|++|+.+. .|++|++..+..... .......+.+|...+.++++++ ..+++|
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~ 90 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEGNNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASK---GIILVGC 90 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSSSSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEET---TEEEEEC
T ss_pred CCCEEEEEEeCCCcEEEEECCCccccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCC---CEEEEEE
Confidence 45899999999999999997543 599999876421000 0001134678888888888765 355554
Q ss_pred ----------eCCCcEEEEeCCCCCcceec-----cccccCCCCCEEEEEEcCCCCeEEE--EEECCCeEEEEECCCCCc
Q psy4510 292 ----------DCKRNIHIWTPREAGAWQVD-----QKPLVGHTNSVEDLQWSPGEKRVLA--SCSVDLSIRIWDTRVINT 354 (812)
Q Consensus 292 ----------~~dg~i~vwd~~~~~~~~~~-----~~~~~~h~~~v~~~~~~p~~~~~l~--s~~~dg~i~iwd~~~~~~ 354 (812)
+.|+++++|++......... ......+...+.+++|+|+|+. ++ +++.|++|+|||+++
T Consensus 91 ~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~-la~as~~~d~~i~iwd~~~--- 166 (365)
T 4h5i_A 91 NENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTV-AAIASSKVPAIMRIIDPSD--- 166 (365)
T ss_dssp CCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSC-EEEEESCSSCEEEEEETTT---
T ss_pred CCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCE-EEEEECCCCCEEEEeECCC---
Confidence 45788999998765431111 1122345567999999999995 44 445799999999984
Q ss_pred ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce--EEcccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 355 KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATFKHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 355 ~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--~~~~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..++..+ .|...|.+++|+|+|++|++++.++ +++|+... +..+ .....|...|.+++|+|++ .++++++.
T Consensus 167 ~~~~~~~--~~~~~V~~v~fspdg~~l~s~s~~~-~~~~~~~~---~~~~~~~~~~~~~~~v~~v~fspdg-~~l~~~s~ 239 (365)
T 4h5i_A 167 LTEKFEI--ETRGEVKDLHFSTDGKVVAYITGSS-LEVISTVT---GSCIARKTDFDKNWSLSKINFIADD-TVLIAASL 239 (365)
T ss_dssp TEEEEEE--ECSSCCCEEEECTTSSEEEEECSSC-EEEEETTT---CCEEEEECCCCTTEEEEEEEEEETT-EEEEEEEE
T ss_pred CcEEEEe--CCCCceEEEEEccCCceEEecccee-EEEEEecc---CcceeeeecCCCCCCEEEEEEcCCC-CEEEEEec
Confidence 4445555 4778899999999999999998665 66666553 3333 3456788899999999997 68888887
Q ss_pred CC----CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 433 DD----QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 433 dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
|+ .+++|++..... ..
T Consensus 240 d~~~~~~i~~~~~~~~~~-----------------~~------------------------------------------- 259 (365)
T 4h5i_A 240 KKGKGIVLTKISIKSGNT-----------------SV------------------------------------------- 259 (365)
T ss_dssp SSSCCEEEEEEEEETTEE-----------------EE-------------------------------------------
T ss_pred CCcceeEEeeccccccee-----------------cc-------------------------------------------
Confidence 76 466676544310 00
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccc
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRG 588 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~ 588 (812)
.....+.+|..
T Consensus 260 ---------------------------------------------------------------------~~~~~~~~~~~ 270 (365)
T 4h5i_A 260 ---------------------------------------------------------------------LRSKQVTNRFK 270 (365)
T ss_dssp ---------------------------------------------------------------------EEEEEEESSCS
T ss_pred ---------------------------------------------------------------------eeeeeecCCCC
Confidence 00123455667
Q ss_pred eEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeee-ecCCCCceEEEEeCCC
Q psy4510 589 CINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS-FSGHLTEGFAMDWSST 667 (812)
Q Consensus 589 ~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~gh~~~V~~l~~sp~ 667 (812)
.|++++|+|+|++|++| +.|++|+|||+.+++ ++.. +.+|...|++|+|||
T Consensus 271 ~V~~~~~Spdg~~lasg--s~D~~V~iwd~~~~~-------------------------~~~~~~~gH~~~V~~v~fSp- 322 (365)
T 4h5i_A 271 GITSMDVDMKGELAVLA--SNDNSIALVKLKDLS-------------------------MSKIFKQAHSFAITEVTISP- 322 (365)
T ss_dssp CEEEEEECTTSCEEEEE--ETTSCEEEEETTTTE-------------------------EEEEETTSSSSCEEEEEECT-
T ss_pred CeEeEEECCCCCceEEE--cCCCEEEEEECCCCc-------------------------EEEEecCcccCCEEEEEECC-
Confidence 89999999999999999 899999999999876 5665 589999999999999
Q ss_pred CCCeEEecCCCceEEEEecCC
Q psy4510 668 EPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 668 ~~~~las~s~Dg~v~iWd~~~ 688 (812)
++++|||||.|++||||++..
T Consensus 323 dg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 323 DSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp TSCEEEEEETTSEEEEEECCT
T ss_pred CCCEEEEEeCCCeEEEEEcCC
Confidence 888999999999999999854
No 92
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.7e-33 Score=306.79 Aligned_cols=317 Identities=14% Similarity=0.195 Sum_probs=230.9
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc-------ccccccccCCCC------------CCeeeeeEcCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------WQVDQKPLGGHT------------NSAEDLQWSDL 234 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~-------~~~~~~~l~~h~------------~~V~~l~~s~~ 234 (812)
.|.+.|++++|+| ++++||+|+.||.|+||++.+... .......+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~-~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNH-SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECS-SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECC-CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 4678999999999 999999999999999999987652 112356778998 89999999999
Q ss_pred C--CcEEEeeCCCceEEeeCCCCCCC--------------------CCCC------------CCceE-EcCCCCcEEEEE
Q psy4510 235 K--TALQTVDDPFQLAEHNKKRGKGP--------------------GIPT------------PPLFS-FSGHLTEGFAMD 279 (812)
Q Consensus 235 ~--~~l~s~~~d~~i~vwd~~~~~~~--------------------~~~~------------~~~~~-~~~h~~~v~~l~ 279 (812)
+ .+|++++.|+.|++|++..+... .... .+... ..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 8 78999999999999998763100 0000 00112 368999999999
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCCCCCccee----ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQV----DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~----~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
|+|++ .+|++| .|+.|++||+........ ....+.+|...|++++|+|++..+|++|+.||.|++||+++....
T Consensus 185 ~~~~~-~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 262 (447)
T 3dw8_B 185 INSDY-ETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC 262 (447)
T ss_dssp ECTTS-SEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS
T ss_pred EcCCC-CEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc
Confidence 99998 789998 799999999985432110 012467899999999999998448999999999999999865421
Q ss_pred c-ceeecCCcCCC------------CeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC---------
Q psy4510 356 S-CMLTLPNAHTS------------DVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP--------- 413 (812)
Q Consensus 356 ~-~~~~~~~~~~~------------~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~--------- 413 (812)
. .+..+ ..|.. .|.+++|+|++++|++++. |.|++||++. .+.++..+..|...
T Consensus 263 ~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~--~~~~~~~~~~~~~~~~~l~~~~~ 338 (447)
T 3dw8_B 263 DRHSKLF-EEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNM--ENRPVETYQVHEYLRSKLCSLYE 338 (447)
T ss_dssp CTTCEEE-CCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTC--CSSCSCCEESCGGGTTTHHHHHH
T ss_pred cceeeEe-ccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCC--Cccccceeecccccccccccccc
Confidence 1 13344 55554 8999999999999999999 9999999985 35677777777532
Q ss_pred ------EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhh---hhccCCCceEE-------------eecCCC
Q psy4510 414 ------VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREA---ELKDLPSQLLF-------------IHLGQK 471 (812)
Q Consensus 414 ------v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~~~~~~-------------~~~~~~ 471 (812)
+..++|+|++ .+|++|+.||.|++||+.+.+......... .....++.... ......
T Consensus 339 ~~~i~~~~~~~~s~~~-~~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 417 (447)
T 3dw8_B 339 NDCIFDKFECCWNGSD-SVVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNK 417 (447)
T ss_dssp TSGGGCCCCEEECTTS-SEEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTS
T ss_pred ccccccceEEEECCCC-CEEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCcccccccccccccCC
Confidence 3359999997 689999999999999998875321000000 00000000000 112234
Q ss_pred ceeEEEEcCCCCCEEEEEeCCCeEEEEe
Q psy4510 472 EIKELHWHPQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~~~~~~~~ 499 (812)
.|..++|+|+++ ++++++.+++.+|..
T Consensus 418 ~i~~~~~~p~~~-~la~~~~~~~~~~~~ 444 (447)
T 3dw8_B 418 KILHTAWHPKEN-IIAVATTNNLYIFQD 444 (447)
T ss_dssp CCCEEEECSSSS-EEEEECSSCEEEEEC
T ss_pred ceeEEEECCCCC-EEEEEecceeeeecc
Confidence 689999999985 666777778877753
No 93
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=100.00 E-value=9.7e-33 Score=296.04 Aligned_cols=263 Identities=16% Similarity=0.237 Sum_probs=219.5
Q ss_pred CccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCC
Q psy4510 168 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPF 245 (812)
Q Consensus 168 ~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~ 245 (812)
.+..+.||.+.|++++|+| ++++||+|+.||.|+||++..... .....+.+|...|++++|+++ +++|++++.|+
T Consensus 3 ~~~~~~~h~~~v~~~~~s~-~~~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg 79 (379)
T 3jrp_A 3 MVVIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDG 79 (379)
T ss_dssp --CCEEECCCCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEE--EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred ccEEecCCcccEEEEEEcC-CCCEEEEEECCCcEEEEecCCCcc--eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCC
Confidence 3455679999999999999 999999999999999999974321 255678899999999999987 99999999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
.|++||+.++ ....+..+.+|...|.+++|+|+ + .+|++|+.||.|++||+...... ....+.+|...|.
T Consensus 80 ~v~iwd~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~d~~i~v~d~~~~~~~--~~~~~~~~~~~v~ 151 (379)
T 3jrp_A 80 KVLIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVN 151 (379)
T ss_dssp CEEEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCTTSCC--CEEEEECCTTCEE
T ss_pred EEEEEEcCCC-----ceeEeeeecCCCcceEEEEeCCCCCC-CEEEEecCCCcEEEEecCCCCce--eeEEecCCCCceE
Confidence 9999999885 22377888899999999999999 6 89999999999999999887421 2345678999999
Q ss_pred EEEEcC-------------CCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCC---CCEEEEEeC
Q psy4510 324 DLQWSP-------------GEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRT---EPLIVSGGD 386 (812)
Q Consensus 324 ~~~~~p-------------~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~ 386 (812)
+++|+| ++. +|++++.||.|++||++...... ....+ .+|...|.+++|+|+ +++|++|+.
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~ 229 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQ 229 (379)
T ss_dssp EEEECCCC----------CTTC-EEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred EEEEcCccccccccccCCCCCC-EEEEEeCCCeEEEEEecCCCcceeeEEEE-ecccCcEeEEEECCCCCCCCeEEEEeC
Confidence 999999 466 79999999999999998654332 23344 789999999999999 889999999
Q ss_pred CCcEEEEecCCCCCCCceEEc--ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATF--KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~--~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
||.|++||++..........+ ..|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 230 dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g-~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 230 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS-CCEEEEESSSSEEEEEEEET
T ss_pred CCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC-CEEEEecCCCcEEEEeCCCC
Confidence 999999999853222223333 3488999999999997 58999999999999999855
No 94
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=100.00 E-value=9.6e-33 Score=298.62 Aligned_cols=297 Identities=12% Similarity=0.218 Sum_probs=232.3
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..++++|....++++|+.||.|+||++............+.+|...|++++|+| ++++|++++.|+.|++|++.++...
T Consensus 38 ~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~ 117 (402)
T 2aq5_A 38 GFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLV 117 (402)
T ss_dssp CSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCS
T ss_pred CcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCc
Confidence 358888833345667899999999999775543335667889999999999999 9999999999999999999885322
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc--cCCCCCEEEEEEcCCCCeEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.....++..+.+|...|.+++|+|++..+|++|+.||.|++||+.++. ....+ .+|...|.+++|+|++. +|+
T Consensus 118 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~----~~~~~~~~~~~~~v~~~~~~~~~~-~l~ 192 (402)
T 2aq5_A 118 LPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA----AVLTLGPDVHPDTIYSVDWSRDGA-LIC 192 (402)
T ss_dssp SCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE----EEEEECTTTCCSCEEEEEECTTSS-CEE
T ss_pred cccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC----ccEEEecCCCCCceEEEEECCCCC-EEE
Confidence 112267889999999999999999986799999999999999999876 45556 78999999999999998 599
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCC-eEEEEEcCCCCEEEEE---eCCCcEEEEecCCCCCCCceEEc-ccCC
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNRTEPLIVSG---GDDGCIHVWDLRRFKKGSSVATF-KHHT 411 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~~l~sg---~~dg~i~iwd~~~~~~~~~~~~~-~~h~ 411 (812)
+++.||.|++||+++ ...+..+...|... +.+++|+|++.+|++| +.|+.|++||++... .++... ..|.
T Consensus 193 ~~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~--~~~~~~~~~~~ 267 (402)
T 2aq5_A 193 TSCRDKRVRVIEPRK---GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLE--EPLSLQELDTS 267 (402)
T ss_dssp EEETTSEEEEEETTT---TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCS--SCSEEEECCCC
T ss_pred EEecCCcEEEEeCCC---CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCcccc--CCceEEeccCC
Confidence 999999999999985 33444443466655 8999999999999999 789999999998633 223333 2477
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..|.+++|+|++..++++++.|+.|++||+...+.. ...+..+.+...|.+++|+|++..+ +++.
T Consensus 268 ~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~-------------~~~l~~~~~~~~v~~~~~sp~~~~~--~s~~ 332 (402)
T 2aq5_A 268 SGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPF-------------LHYLSMFSSKESQRGMGYMPKRGLE--VNKC 332 (402)
T ss_dssp SSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTC-------------EEEEEEECCSSCCSEEEECCGGGSC--GGGT
T ss_pred CceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcc-------------eEeecccccCCcccceEEecccccc--eecc
Confidence 889999999998544456667999999999877410 1334445556789999999996433 3344
Q ss_pred CCeEEEEeCC
Q psy4510 492 SGFNIFRTIS 501 (812)
Q Consensus 492 ~~~~~~~~~~ 501 (812)
+.+.+|....
T Consensus 333 ~~~~~~~l~~ 342 (402)
T 2aq5_A 333 EIARFYKLHE 342 (402)
T ss_dssp EEEEEEEEET
T ss_pred eeEEEEEcCC
Confidence 4566666544
No 95
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=3.1e-32 Score=288.21 Aligned_cols=268 Identities=16% Similarity=0.219 Sum_probs=221.5
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC--CCCcEEEeeCCCceEE
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD--LKTALQTVDDPFQLAE 249 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~--~~~~l~s~~~d~~i~v 249 (812)
+.||.+.|++++|+| ++++||+|+.||.|+||++.+..........+.+|...|++++|+| ++++|++++.|+.|++
T Consensus 7 ~~gH~~~v~~~~~~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~v 85 (351)
T 3f3f_A 7 DSGHDDLVHDVVYDF-YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKL 85 (351)
T ss_dssp ECCCSSCEEEEEECS-SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEE
T ss_pred CcccccceeEEEEcC-CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEE
Confidence 358999999999999 9999999999999999999987654446677889999999999999 6999999999999999
Q ss_pred eeCCCCCCCC--CCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCccee---------cccccc
Q psy4510 250 HNKKRGKGPG--IPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQV---------DQKPLV 316 (812)
Q Consensus 250 wd~~~~~~~~--~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~---------~~~~~~ 316 (812)
|++..+.... ...+++..+.+|...|.+++|+|+ + .+|++|+.||.|++||+.++..... ......
T Consensus 86 wd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 164 (351)
T 3f3f_A 86 WEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLG-LKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPA 164 (351)
T ss_dssp EEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCS
T ss_pred EecCCCcccccccCcceeeeecccCCceeEEEEcCCCCC-cEEEEecCCCcEEEecCCChHHhccccccccccccccccC
Confidence 9998752110 011447788899999999999998 7 8999999999999999988763110 001123
Q ss_pred CCCCCEEEEEEcCC---CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC----CEEEEEeCCCc
Q psy4510 317 GHTNSVEDLQWSPG---EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE----PLIVSGGDDGC 389 (812)
Q Consensus 317 ~h~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~----~~l~sg~~dg~ 389 (812)
+|...+.+++|+|+ +. +|++++.++.+.+|+..... ...+..+ .+|...|++++|+|++ ++|++|+.||.
T Consensus 165 ~~~~~~~~~~~~p~~~~~~-~l~~~~~~~~~~~~~~~~~~-~~~~~~~-~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~ 241 (351)
T 3f3f_A 165 NHLQSDFCLSWCPSRFSPE-KLAVSALEQAIIYQRGKDGK-LHVAAKL-PGHKSLIRSISWAPSIGRWYQLIATGCKDGR 241 (351)
T ss_dssp SCSCCCEEEEECCCSSSCC-EEEEEETTEEEEEEECTTSC-EEEEEEC-CCCCSCEEEEEECCCSSCSSEEEEEEETTSC
T ss_pred CcccceeEEEeccCCCCCc-EEEEecCCCcEEEEccCCCc-eeeeeec-CCCCcceeEEEECCCCCCcceEEEEEcCCCe
Confidence 68889999999997 55 79999999999888876432 2234445 7899999999999998 79999999999
Q ss_pred EEEEecCCCC-------------------------------------------CCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 390 IHVWDLRRFK-------------------------------------------KGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 390 i~iwd~~~~~-------------------------------------------~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|++||++... ....+..+.+|...|++++|+|++ .+
T Consensus 242 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~-~~ 320 (351)
T 3f3f_A 242 IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTG-TI 320 (351)
T ss_dssp EEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSS-CC
T ss_pred EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCC-CE
Confidence 9999997421 014667788899999999999987 69
Q ss_pred EEEEECCCCEEEEEcCCCC
Q psy4510 427 FASGGADDQIALWDLAVER 445 (812)
Q Consensus 427 l~s~~~dg~v~iwd~~~~~ 445 (812)
|++++.||.|++||+...+
T Consensus 321 l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 321 LSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEEETTSCEEEEEECTTS
T ss_pred EEEecCCCcEEEEecCcCc
Confidence 9999999999999998774
No 96
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=100.00 E-value=3.9e-32 Score=298.60 Aligned_cols=332 Identities=19% Similarity=0.297 Sum_probs=237.8
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc-------ceeccccccCCC------------CCEEEEEEcCC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------WQVDQKPLVGHT------------NSVEDLQWSPG 330 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~-------~~~~~~~~~~h~------------~~v~~~~~~p~ 330 (812)
.|.+.|.+++|+|++ .+||+|+.||.|+||++.++.. .......+.+|. ..|++++|+|+
T Consensus 26 ~~~~~V~~v~~s~~g-~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 26 AEADIISTVEFNHSG-ELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp CGGGSEEEEEECSSS-SEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred cccCcEEEEEECCCC-CEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 367899999999998 8999999999999999987651 111255677898 88999999999
Q ss_pred CC-eEEEEEECCCeEEEEECCCCCcc------------------------------------cceeecCCcCCCCeEEEE
Q psy4510 331 EK-RVLASCSVDLSIRIWDTRVINTK------------------------------------SCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 331 ~~-~~l~s~~~dg~i~iwd~~~~~~~------------------------------------~~~~~~~~~~~~~v~~l~ 373 (812)
+. ..|++++.||.|++||+...... .+...+..+|...|.+++
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~ 184 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSIS 184 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEE
Confidence 83 26999999999999998742210 011123368999999999
Q ss_pred EcCCCCEEEEEeCCCcEEEEecCCCCCCCceE-------EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCc
Q psy4510 374 WNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA-------TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERD 446 (812)
Q Consensus 374 ~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~-------~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~ 446 (812)
|+|++++|++| .||.|++||++. ....+. .+.+|...|++++|+|++..+|++|+.||.|++||++....
T Consensus 185 ~~~~~~~l~s~-~d~~i~iwd~~~--~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 185 INSDYETYLSA-DDLRINLWHLEI--TDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp ECTTSSEEEEE-CSSEEEEEETTE--EEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSS
T ss_pred EcCCCCEEEEe-CCCeEEEEECCC--CCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCcc
Confidence 99999999998 799999999974 223333 36789999999999999767999999999999999987631
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCC
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
.. ..+.. + .-+..
T Consensus 262 ~~----------------------~~~~~---------------------~-----------------------~~~~~- 274 (447)
T 3dw8_B 262 CD----------------------RHSKL---------------------F-----------------------EEPED- 274 (447)
T ss_dssp SC----------------------TTCEE---------------------E-----------------------CCC---
T ss_pred cc----------------------ceeeE---------------------e-----------------------ccCCC-
Confidence 00 00000 0 00000
Q ss_pred CCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEe
Q psy4510 527 PGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGV 606 (812)
Q Consensus 527 ~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~ 606 (812)
+.....+..|...|.+++|+|++++|+++
T Consensus 275 --------------------------------------------------~~~~~~~~~~~~~v~~~~~s~~g~~l~~~- 303 (447)
T 3dw8_B 275 --------------------------------------------------PSNRSFFSEIISSISDVKFSHSGRYMMTR- 303 (447)
T ss_dssp -----------------------------------------------------CCHHHHHTTCEEEEEECTTSSEEEEE-
T ss_pred --------------------------------------------------ccccccccccCceEEEEEECCCCCEEEEe-
Confidence 00011234566799999999999999988
Q ss_pred ecCcceEEEEeccc-cccccCCcccccccccccCCCCCCCCCCeeeecCCCCc---------------eEEEEeCCCCCC
Q psy4510 607 WGEVGKVGIWDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE---------------GFAMDWSSTEPG 670 (812)
Q Consensus 607 ~~~dg~I~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~---------------V~~l~~sp~~~~ 670 (812)
+. +.|++||+.. +. ++..+.+|... +..++|+| ++.
T Consensus 304 -~~-~~v~iwd~~~~~~-------------------------~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~-~~~ 355 (447)
T 3dw8_B 304 -DY-LSVKVWDLNMENR-------------------------PVETYQVHEYLRSKLCSLYENDCIFDKFECCWNG-SDS 355 (447)
T ss_dssp -ES-SEEEEEETTCCSS-------------------------CSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECT-TSS
T ss_pred -eC-CeEEEEeCCCCcc-------------------------ccceeeccccccccccccccccccccceEEEECC-CCC
Confidence 66 9999999986 43 55667777532 34599999 788
Q ss_pred eEEecCCCceEEEEecCCCceeEEEEecC--------CCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeE
Q psy4510 671 VLATGDCKRNIHIWTPREAGAWSVYLYTN--------RFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 742 (812)
Q Consensus 671 ~las~s~Dg~v~iWd~~~~~~~~~~~~s~--------dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~ 742 (812)
+|++++.||.|++||+.+++...+..... ..+.+..++.. .... .......+...|.+++
T Consensus 356 ~l~s~s~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~i~~~~ 423 (447)
T 3dw8_B 356 VVMTGSYNNFFRMFDRNTKRDITLEASRENNKPRTVLKPRKVCASGKR---------KKDE---ISVDSLDFNKKILHTA 423 (447)
T ss_dssp EEEEECSTTEEEEEETTTCCEEEEECCSTTCCTTCBCCCCCEECSSCC---------CTTC---EEGGGCCTTSCCCEEE
T ss_pred EEEEeccCCEEEEEEcCCCcceeeeecccccccccccCCccccccCCc---------cccc---ccccccccCCceeEEE
Confidence 99999999999999999988775543111 01122222111 1111 1112234567899999
Q ss_pred EecCCceeEEeeccCCceEEeee
Q psy4510 743 WSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 743 fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
|+|++. +||+++.++ +.+|.-
T Consensus 424 ~~p~~~-~la~~~~~~-~~~~~~ 444 (447)
T 3dw8_B 424 WHPKEN-IIAVATTNN-LYIFQD 444 (447)
T ss_dssp ECSSSS-EEEEECSSC-EEEEEC
T ss_pred ECCCCC-EEEEEecce-eeeecc
Confidence 999999 899888776 777754
No 97
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=100.00 E-value=5.9e-32 Score=294.74 Aligned_cols=316 Identities=23% Similarity=0.440 Sum_probs=247.4
Q ss_pred CceEEEEeCCCCC----------CeEEEecC----CCcEEEEccCC-----------------------CCccccccccc
Q psy4510 177 TEGFAMDWSSTEP----------GVLATGDC----KRNIHIWTPRE-----------------------AGAWQVDQKPL 219 (812)
Q Consensus 177 ~~i~~~~~sp~~~----------~~lat~~~----dg~v~iwd~~~-----------------------~~~~~~~~~~l 219 (812)
-+..++.|.| +. .+|+.|+. ...|.|+++.- ..........+
T Consensus 46 wp~l~~~~~p-~~~~~~~~~~~~~~~~~GT~t~~~~n~i~i~~~~lp~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 124 (430)
T 2xyi_A 46 WPSLTAQWLP-DVTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVCGKIEIEIK 124 (430)
T ss_dssp SCCSCEEECS-CCEECTTCSCEEEEEEEECCCSSSCEEEEEEEEEEC--------------------------CEEEEEE
T ss_pred CCceEEEECc-ccccccCCCcceEEEEEEEcCCCCCCEEEEEEEECCCCccccccccccccccccccccCCCCceEEEEE
Confidence 4567788888 43 45777653 35677776530 01111223456
Q ss_pred CCCCCCeeeeeEcCC-CCcEEEeeCCCceEEeeCCCCCCC---CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 220 GGHTNSAEDLQWSDL-KTALQTVDDPFQLAEHNKKRGKGP---GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~-~~~l~s~~~d~~i~vwd~~~~~~~---~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
..|.+.|++++|+|+ +.+|++++.+|.|++|++...... .....++..+.+|...|++|+|+|++..+|++|+.||
T Consensus 125 ~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg 204 (430)
T 2xyi_A 125 INHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDH 204 (430)
T ss_dssp EEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTS
T ss_pred EcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCC
Confidence 789999999999997 689999999999999999762100 0124788899999999999999999856999999999
Q ss_pred cEEEEeCCCCCcc---eeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEE
Q psy4510 296 NIHIWTPREAGAW---QVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 296 ~i~vwd~~~~~~~---~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l 372 (812)
.|++|++...... ......+.+|...|.+++|+|++..+|++++.||.|++||++.......+..+ ..|...|+++
T Consensus 205 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~-~~~~~~v~~i 283 (430)
T 2xyi_A 205 TICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTV-DAHTAEVNCL 283 (430)
T ss_dssp CEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEE-ECCSSCEEEE
T ss_pred eEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEe-ecCCCCeEEE
Confidence 9999999885421 11245567899999999999966668999999999999999975434455555 6899999999
Q ss_pred EEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHH
Q psy4510 373 SWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQ 451 (812)
Q Consensus 373 ~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~ 451 (812)
+|+|+++ +|++|+.||.|++||++. ...++..+..|...|++++|+|++..+|++++.|+.|++||+.......
T Consensus 284 ~~~p~~~~~l~tg~~dg~v~vwd~~~--~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~--- 358 (430)
T 2xyi_A 284 SFNPYSEFILATGSADKTVALWDLRN--LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQ--- 358 (430)
T ss_dssp EECSSCTTEEEEEETTSEEEEEETTC--TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCC---
T ss_pred EeCCCCCCEEEEEeCCCeEEEEeCCC--CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCcccc---
Confidence 9999997 899999999999999996 3567889999999999999999987899999999999999998743211
Q ss_pred hhhhhccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEEeCCCe-EEEEe
Q psy4510 452 REAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGF-NIFRT 499 (812)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~-~~~~~ 499 (812)
........++++++.+.++. .|.+++|+|++++++++++.++. .+|+.
T Consensus 359 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~ 408 (430)
T 2xyi_A 359 STEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQM 408 (430)
T ss_dssp CHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEE
T ss_pred CccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEc
Confidence 11123445667888887765 69999999999988888888875 55554
No 98
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=100.00 E-value=2.8e-31 Score=277.19 Aligned_cols=242 Identities=20% Similarity=0.357 Sum_probs=197.9
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
..+++||+ ++ +||+|. |++|+|||+.+++.. ....+.+|...|++++|+|++++|++|+.|+.|++|++.++
T Consensus 28 ~~~l~WS~-~~-~lAvg~-D~tV~iWd~~tg~~~--~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~--- 99 (318)
T 4ggc_A 28 LNLVDWSS-GN-VLAVAL-DNSVYLWSASSGDIL--QLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ--- 99 (318)
T ss_dssp CBCEEECT-TS-EEEEEE-TTEEEEEETTTCCEE--EEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT---
T ss_pred ceEEEECC-CC-EEEEEe-CCEEEEEECCCCCEE--EEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc---
Confidence 35699999 65 888876 899999999988732 22345688899999999999999999999999999999985
Q ss_pred CCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 259 GIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 259 ~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+++..+.+|...+.++.+.+ .++++|+.++.+++|+...... ....+.+|...+..+.|+++++ +|+++
T Consensus 100 ----~~~~~~~~h~~~~~~~~~~~---~~l~s~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~l~s~ 168 (318)
T 4ggc_A 100 ----KRLRNMTSHSARVGSLSWNS---YILSSGSRSGHIHHHDVRVAEH---HVATLSGHSQEVCGLRWAPDGR-HLASG 168 (318)
T ss_dssp ----EEEEEEECCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECTTSS-EEEEE
T ss_pred ----eeEEEecCccceEEEeecCC---CEEEEEecCCceEeeecCCCce---eEEEEcCccCceEEEEEcCCCC-EEEEE
Confidence 78889999999998877654 6899999999999999887653 4566788999999999999998 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-E--EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-L--IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~--l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+.||.|++||++++............+...|.+++++|.+. . +++|+.++.|++||.+. .. ......+...+.
T Consensus 169 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~---~~-~~~~~~~~~~v~ 244 (318)
T 4ggc_A 169 GNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCS---GA-CLSAVDAHSQVC 244 (318)
T ss_dssp ETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTT---CC-EEEEEECSSCEE
T ss_pred ecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEeccc---cc-ccccccceeeee
Confidence 99999999999876544333333367888999999999876 3 35667889999999973 33 344455778899
Q ss_pred EEEEccCCCcEEEEE--ECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASG--GADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~--~~dg~v~iwd~~~~ 444 (812)
.+.|+|.+. .++++ +.|+.|++||+.+.
T Consensus 245 ~~~~~~~~~-~~~~~sg~~d~~i~iwd~~~~ 274 (318)
T 4ggc_A 245 SILWSPHYK-ELISGHGFAQNQLVIWKYPTM 274 (318)
T ss_dssp EEEEETTTT-EEEEEECTTTCCEEEEETTTC
T ss_pred eeeeccccc-ceEEEEEcCCCEEEEEECCCC
Confidence 999999975 44443 37999999998765
No 99
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.5e-32 Score=285.97 Aligned_cols=264 Identities=21% Similarity=0.318 Sum_probs=202.5
Q ss_pred cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEe
Q psy4510 215 DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGD 292 (812)
Q Consensus 215 ~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~ 292 (812)
....+.+|.+.|++++|+|++++|++|+.|++|++||+.++ ...++..+.+|.+.|.+++|+|. + .+|++|+
T Consensus 5 ~~~~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~-----~~~~~~~l~gH~~~V~~v~~~~~~~~-~~l~s~s 78 (316)
T 3bg1_A 5 INTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNG-----GQILIADLRGHEGPVWQVAWAHPMYG-NILASCS 78 (316)
T ss_dssp ---------CCEEEEEECGGGCEEEEEETTTEEEEEEEETT-----EEEEEEEEECCSSCEEEEEECCGGGS-SCEEEEE
T ss_pred eeeecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCC-----CcEEEEEEcCCCccEEEEEeCCCCCC-CEEEEEE
Confidence 34567799999999999999999999999999999999874 12356789999999999999864 5 7999999
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeE
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVN 370 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 370 (812)
.|++|++||+.++.. .....+.+|...|++++|+|+ +. +|++|+.||.|++||++...... ......+|...|.
T Consensus 79 ~D~~v~iWd~~~~~~--~~~~~~~~h~~~V~~v~~~p~~~g~-~lasgs~D~~i~lwd~~~~~~~~-~~~~~~~h~~~v~ 154 (316)
T 3bg1_A 79 YDRKVIIWREENGTW--EKSHEHAGHDSSVNSVCWAPHDYGL-ILACGSSDGAISLLTYTGEGQWE-VKKINNAHTIGCN 154 (316)
T ss_dssp TTSCEEEECCSSSCC--CEEEEECCCSSCCCEEEECCTTTCS-CEEEECSSSCEEEEEECSSSCEE-ECCBTTSSSSCBC
T ss_pred CCCEEEEEECCCCcc--eEEEEccCCCCceEEEEECCCCCCc-EEEEEcCCCCEEEEecCCCCCcc-eeeeeccccCCcc
Confidence 999999999987631 123457789999999999998 55 69999999999999998542221 1233378999999
Q ss_pred EEEEcCC-----------------CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC---CcEEEEE
Q psy4510 371 VISWNRT-----------------EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE---SSTFASG 430 (812)
Q Consensus 371 ~l~~~~~-----------------~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~---~~~l~s~ 430 (812)
+++|+|+ +++|++|+.|+.|++||++.......+..+.+|...|.+++|+|++ ..+|+++
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~ 234 (316)
T 3bg1_A 155 AVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASC 234 (316)
T ss_dssp CCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEE
T ss_pred eEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEE
Confidence 9999997 3689999999999999997421124677889999999999999985 3689999
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
+.|++|++|++...... ......+ ..+...|.+++|+|++..++.++.++.+.+|+..
T Consensus 235 s~D~~v~iw~~~~~~~~----------~~~~~~~--~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~ 292 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSN----------TWSPKLL--HKFNDVVWHVSWSITANILAVSGGDNKVTLWKES 292 (316)
T ss_dssp ETTCEEEEEECSSTTCC----------CCBCCEE--EECSSCEEEEEECTTTCCEEEEESSSCEEEEEEC
T ss_pred cCCCeEEEEEccCcccc----------chhhhhh--hcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEEC
Confidence 99999999999763110 0001222 3345689999999998766555556667777653
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=8.4e-32 Score=284.43 Aligned_cols=281 Identities=9% Similarity=0.036 Sum_probs=230.1
Q ss_pred cCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEe
Q psy4510 172 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEH 250 (812)
Q Consensus 172 ~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vw 250 (812)
..+|.+.|++++|+| ++++||+|+.||.|+||++.+..... ....+.+|...|.+++|+|+++ +|++++.++.|++|
T Consensus 7 ~~~h~~~v~~~~~s~-~~~~l~~~~~d~~v~iw~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~w 84 (342)
T 1yfq_A 7 EQAPKDYISDIKIIP-SKSLLLITSWDGSLTVYKFDIQAKNV-DLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKV 84 (342)
T ss_dssp SSCCSSCEEEEEEEG-GGTEEEEEETTSEEEEEEEETTTTEE-EEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEE
T ss_pred ccCCCCcEEEEEEcC-CCCEEEEEcCCCeEEEEEeCCCCccc-cceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEE
Confidence 348999999999999 99999999999999999998765221 2344558999999999999999 99999999999999
Q ss_pred eC-CCCCCCCCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC---------CCcceeccccccCC
Q psy4510 251 NK-KRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE---------AGAWQVDQKPLVGH 318 (812)
Q Consensus 251 d~-~~~~~~~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~---------~~~~~~~~~~~~~h 318 (812)
++ .++ ....+.+ |...|.+++|+| + .+|++++.|+.|++||+.+ .. ....+. |
T Consensus 85 d~~~~~--------~~~~~~~~~~~~~v~~l~~~~-~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----~~~~~~-~ 149 (342)
T 1yfq_A 85 DLIGSP--------SFQALTNNEANLGICRICKYG-D-DKLIAASWDGLIEVIDPRNYGDGVIAVKNL----NSNNTK-V 149 (342)
T ss_dssp CSSSSS--------SEEECBSCCCCSCEEEEEEET-T-TEEEEEETTSEEEEECHHHHTTBCEEEEES----CSSSSS-S
T ss_pred EeccCC--------ceEeccccCCCCceEEEEeCC-C-CEEEEEcCCCeEEEEcccccccccccccCC----eeeEEe-e
Confidence 99 763 3477888 999999999999 6 8999999999999999986 43 344444 8
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC-CCcccceeecCCcCCCCeEEEEEcC-CCCEEEEEeCCCcEEEEecC
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV-INTKSCMLTLPNAHTSDVNVISWNR-TEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~~dg~i~iwd~~ 396 (812)
...|.+++|+|++ +++++.|+.|++||++. .... .......|...|.+++|+| +++++++|+.||.|++|+++
T Consensus 150 ~~~v~~~~~~~~~---l~~~~~d~~i~i~d~~~~~~~~--~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 150 KNKIFTMDTNSSR---LIVGMNNSQVQWFRLPLCEDDN--GTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp CCCEEEEEECSSE---EEEEESTTEEEEEESSCCTTCC--CEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred CCceEEEEecCCc---EEEEeCCCeEEEEECCcccccc--ceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 8999999999876 88999999999999986 3322 2222257888999999999 99999999999999999998
Q ss_pred CCC---CCCceEEcccCCC---------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 397 RFK---KGSSVATFKHHTA---------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 397 ~~~---~~~~~~~~~~h~~---------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
... ....+..+..|.. .|.+++|+|++ .+|++++.||.|++||+...+ .+.
T Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~-~~l~~~~~dg~i~vwd~~~~~----------------~~~ 287 (342)
T 1yfq_A 225 DQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH-KFLYTAGSDGIISCWNLQTRK----------------KIK 287 (342)
T ss_dssp TTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE----------------EEE
T ss_pred CCCcccccccceeeecccccccccccceeEEEEEEcCCC-CEEEEecCCceEEEEcCccHh----------------Hhh
Confidence 520 0267778888765 99999999987 589999999999999998773 222
Q ss_pred EeecC-CCceeEEEEcCCCCCEEEEEeCCCe
Q psy4510 465 FIHLG-QKEIKELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 465 ~~~~~-~~~v~~~~~~p~~~~~~~~~~~~~~ 494 (812)
....+ ...|.+++ |++. .+++++.++.
T Consensus 288 ~~~~~h~~~v~~~~--~~~~-~l~s~s~Dg~ 315 (342)
T 1yfq_A 288 NFAKFNEDSVVKIA--CSDN-ILCLATSDDT 315 (342)
T ss_dssp ECCCCSSSEEEEEE--ECSS-EEEEEEECTH
T ss_pred hhhcccCCCceEec--CCCC-eEEEEecCCc
Confidence 23333 56799998 7764 6666666664
No 101
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=100.00 E-value=2.3e-31 Score=287.50 Aligned_cols=285 Identities=21% Similarity=0.367 Sum_probs=227.6
Q ss_pred CCCCCceE--EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEE
Q psy4510 173 SGHLTEGF--AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAE 249 (812)
Q Consensus 173 ~gh~~~i~--~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~v 249 (812)
.+|.+.+. ++.|++ ..+++++.||.|+||++.++.. ...+. .|...|++++|+|++++|++++.+|.|++
T Consensus 88 ~~~~~~~~~~~~~~s~---~~l~~~~~d~~v~lw~~~~~~~----~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~i 160 (401)
T 4aez_A 88 PGIIDDYYLNLLDWSN---LNVVAVALERNVYVWNADSGSV----SALAETDESTYVASVKWSHDGSFLSVGLGNGLVDI 160 (401)
T ss_dssp TTCCCCTTCBCEEECT---TSEEEEEETTEEEEEETTTCCE----EEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCCcCCceEEEEeecC---CCEEEEECCCeEEEeeCCCCcE----eEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEE
Confidence 37776644 455554 5678888899999999998773 23333 38999999999999999999999999999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|++.++ +.+..+.+|...|.+++|++ .+|++|+.||.|++||+..... ....+.+|.+.|.+++|+|
T Consensus 161 wd~~~~-------~~~~~~~~~~~~v~~~~~~~---~~l~~~~~dg~i~i~d~~~~~~---~~~~~~~~~~~v~~~~~~~ 227 (401)
T 4aez_A 161 YDVESQ-------TKLRTMAGHQARVGCLSWNR---HVLSSGSRSGAIHHHDVRIANH---QIGTLQGHSSEVCGLAWRS 227 (401)
T ss_dssp EETTTC-------CEEEEECCCSSCEEEEEEET---TEEEEEETTSEEEEEETTSSSC---EEEEEECCSSCEEEEEECT
T ss_pred EECcCC-------eEEEEecCCCCceEEEEECC---CEEEEEcCCCCEEEEecccCcc---eeeEEcCCCCCeeEEEEcC
Confidence 999875 77888999999999999954 6999999999999999985443 4567788999999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEe--CCCcEEEEecCCCCCCCceEE
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGG--DDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~--~dg~i~iwd~~~~~~~~~~~~ 406 (812)
++. +|++|+.||.|++||++. ...+..+ ..|...|.+++|+|++. ++++|+ .||.|++||++ .+..+..
T Consensus 228 ~~~-~l~s~~~d~~v~iwd~~~---~~~~~~~-~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~---~~~~~~~ 299 (401)
T 4aez_A 228 DGL-QLASGGNDNVVQIWDARS---SIPKFTK-TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAA---TGARVNT 299 (401)
T ss_dssp TSS-EEEEEETTSCEEEEETTC---SSEEEEE-CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETT---TCCEEEE
T ss_pred CCC-EEEEEeCCCeEEEccCCC---CCccEEe-cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECC---CCCEEEE
Confidence 988 699999999999999984 4445555 67999999999999875 777765 79999999998 4666777
Q ss_pred cccCCCCEEEEEEccCCCcEEEEE--ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASG--GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPG 484 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~--~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 484 (812)
+. +...|.+++|+|++ .+|+++ +.||.|++||+...... .......+...|.+++|+|++.
T Consensus 300 ~~-~~~~v~~~~~s~~~-~~l~~~~g~~dg~i~v~~~~~~~~~--------------~~~~~~~h~~~v~~~~~s~dg~- 362 (401)
T 4aez_A 300 VD-AGSQVTSLIWSPHS-KEIMSTHGFPDNNLSIWSYSSSGLT--------------KQVDIPAHDTRVLYSALSPDGR- 362 (401)
T ss_dssp EE-CSSCEEEEEECSSS-SEEEEEECTTTCEEEEEEEETTEEE--------------EEEEEECCSSCCCEEEECTTSS-
T ss_pred Ee-CCCcEEEEEECCCC-CeEEEEeecCCCcEEEEecCCccce--------------eEEEecCCCCCEEEEEECCCCC-
Confidence 65 67789999999997 467774 37999999999875321 2222345566899999999986
Q ss_pred EEEEEeCCC-eEEEEeCCC
Q psy4510 485 TIISTANSG-FNIFRTISD 502 (812)
Q Consensus 485 ~~~~~~~~~-~~~~~~~~~ 502 (812)
.+++++.++ +.+|+....
T Consensus 363 ~l~s~~~dg~i~iw~~~~~ 381 (401)
T 4aez_A 363 ILSTAASDENLKFWRVYDG 381 (401)
T ss_dssp EEEEECTTSEEEEEECCC-
T ss_pred EEEEEeCCCcEEEEECCCC
Confidence 455555555 556655443
No 102
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=1.4e-31 Score=283.24 Aligned_cols=310 Identities=15% Similarity=0.187 Sum_probs=213.7
Q ss_pred ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCC
Q psy4510 265 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDL 342 (812)
Q Consensus 265 ~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg 342 (812)
...+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.++.........+.+|...|.+++|+|. +. +|++++.||
T Consensus 4 ~~~~~gH~~~v~~~~~~~~~-~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~-~l~s~~~dg 81 (351)
T 3f3f_A 4 QPFDSGHDDLVHDVVYDFYG-RHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGR-IIASASYDK 81 (351)
T ss_dssp CCEECCCSSCEEEEEECSSS-SEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCS-EEEEEETTS
T ss_pred cccCcccccceeEEEEcCCC-CEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCC-EEEEEcCCC
Confidence 34578999999999999998 799999999999999998765433346667889999999999994 66 799999999
Q ss_pred eEEEEECCCCCcc------cceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceE---------
Q psy4510 343 SIRIWDTRVINTK------SCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVA--------- 405 (812)
Q Consensus 343 ~i~iwd~~~~~~~------~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~--------- 405 (812)
.|++||++..... ..+..+ ..|...|.+++|+|+ +++|++|+.||.|++||++..+....+.
T Consensus 82 ~v~vwd~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 82 TVKLWEEDPDQEECSGRRWNKLCTL-NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp CEEEEEECTTSCTTSSCSEEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred eEEEEecCCCcccccccCcceeeee-cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 9999999864321 334445 689999999999999 9999999999999999998533222111
Q ss_pred -EcccCCCCEEEEEEccC--CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCC
Q psy4510 406 -TFKHHTAPVTTVEWHPT--ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQL 482 (812)
Q Consensus 406 -~~~~h~~~v~~v~~~p~--~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~ 482 (812)
....|...+.+++|+|+ .+.+|++++.++.+.+|+...... .
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~------------------ 205 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKL-----------------H------------------ 205 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCE-----------------E------------------
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCce-----------------e------------------
Confidence 01257778889999886 246888888888886666543310 0
Q ss_pred CCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccccccccc
Q psy4510 483 PGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELED 562 (812)
Q Consensus 483 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 562 (812)
T Consensus 206 -------------------------------------------------------------------------------- 205 (351)
T 3f3f_A 206 -------------------------------------------------------------------------------- 205 (351)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCCCCCCccccCCCccceEEecccceEEEEEEeccC----CeEEEEeecCcceEEEEeccccccccCCccccccccccc
Q psy4510 563 DESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYG----STTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKR 638 (812)
Q Consensus 563 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g----~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~ 638 (812)
....+.+|...|++++|+|++ ++++++ +.||.|++||+......
T Consensus 206 ----------------~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~--~~dg~i~iwd~~~~~~~-------------- 253 (351)
T 3f3f_A 206 ----------------VAAKLPGHKSLIRSISWAPSIGRWYQLIATG--CKDGRIRIFKITEKLSP-------------- 253 (351)
T ss_dssp ----------------EEEECCCCCSCEEEEEECCCSSCSSEEEEEE--ETTSCEEEEEEEECC----------------
T ss_pred ----------------eeeecCCCCcceeEEEECCCCCCcceEEEEE--cCCCeEEEEeCCCCcCc--------------
Confidence 011223456678888899988 678887 89999999999876421
Q ss_pred CCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeec
Q psy4510 639 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTP 718 (812)
Q Consensus 639 ~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~ 718 (812)
.....+...+....+++ ....++++..+ +.....+.+|+.
T Consensus 254 -----------~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----------------------------~~~~~~~~~~~~ 293 (351)
T 3f3f_A 254 -----------LASEESLTNSNMFDNSA-DVDMDAQGRSD----------------------------SNTEEKAELQSN 293 (351)
T ss_dssp -----------------------------------------------------------------------------CCS
T ss_pred -----------cccCCcccceeccCCCc-ccccccccccc----------------------------cccceeeeeccc
Confidence 11222222333333333 22223322221 222334555554
Q ss_pred CCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 719 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 719 ~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
...+ ++..+.+|...|++|+|+|+++ +|+||+.||+|+||++..+.
T Consensus 294 ~~~~----~~~~~~~h~~~v~~~~~s~~~~-~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 294 LQVE----LLSEHDDHNGEVWSVSWNLTGT-ILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EEEE----EEEEECTTSSCEEEEEECSSSC-CEEEEETTSCEEEEEECTTS
T ss_pred cccc----EEEEEecccccEEEEEEcCCCC-EEEEecCCCcEEEEecCcCc
Confidence 4443 4667889999999999999999 89999999999999999876
No 103
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=4.2e-31 Score=288.79 Aligned_cols=243 Identities=23% Similarity=0.424 Sum_probs=210.7
Q ss_pred CCccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc
Q psy4510 167 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ 246 (812)
Q Consensus 167 ~~i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~ 246 (812)
..+....+|...|+|++| ++++||+|+.||.|+|||+.+++ ....+.+|...|.+++| ++++|++|+.||.
T Consensus 124 ~~~~~~~~~~~~v~~~~~---d~~~l~~g~~dg~i~iwd~~~~~----~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~ 194 (435)
T 1p22_A 124 QRIHCRSETSKGVYCLQY---DDQKIVSGLRDNTIKIWDKNTLE----CKRILTGHTGSVLCLQY--DERVIITGSSDST 194 (435)
T ss_dssp CCEECCCSSCCCEEEEEC---CSSEEEEEESSSCEEEEESSSCC----EEEEECCCSSCEEEEEC--CSSEEEEEETTSC
T ss_pred eEEecccCCCCcEEEEEE---CCCEEEEEeCCCeEEEEeCCCCe----EEEEEcCCCCcEEEEEE--CCCEEEEEcCCCe
Confidence 334444478889999886 78999999999999999998877 66778899999999999 7889999999999
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEE
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~ 326 (812)
|++||+.++ +.+..+.+|...|.+++|++ ..|++|+.||.|++||+.++.... ....+.+|...|.+++
T Consensus 195 i~vwd~~~~-------~~~~~~~~h~~~v~~l~~~~---~~l~s~s~dg~i~vwd~~~~~~~~-~~~~~~~~~~~v~~~~ 263 (435)
T 1p22_A 195 VRVWDVNTG-------EMLNTLIHHCEAVLHLRFNN---GMMVTCSKDRSIAVWDMASPTDIT-LRRVLVGHRAAVNVVD 263 (435)
T ss_dssp EEEEESSSC-------CEEEEECCCCSCEEEEECCT---TEEEEEETTSCEEEEECSSSSCCE-EEEEECCCSSCEEEEE
T ss_pred EEEEECCCC-------cEEEEEcCCCCcEEEEEEcC---CEEEEeeCCCcEEEEeCCCCCCce-eeeEecCCCCcEEEEE
Confidence 999999985 77889999999999999974 599999999999999998876321 2256788999999999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT 406 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~ 406 (812)
| +++ +|++|+.||.|++||+++ ..++..+ .+|...|.+++|+ ++++++|+.||.|++||++ .+..+..
T Consensus 264 ~--~~~-~l~s~~~dg~i~vwd~~~---~~~~~~~-~~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~---~~~~~~~ 331 (435)
T 1p22_A 264 F--DDK-YIVSASGDRTIKVWNTST---CEFVRTL-NGHKRGIACLQYR--DRLVVSGSSDNTIRLWDIE---CGACLRV 331 (435)
T ss_dssp E--ETT-EEEEEETTSEEEEEETTT---CCEEEEE-ECCSSCEEEEEEE--TTEEEEEETTSCEEEEETT---TCCEEEE
T ss_pred e--CCC-EEEEEeCCCeEEEEECCc---CcEEEEE-cCCCCcEEEEEeC--CCEEEEEeCCCeEEEEECC---CCCEEEE
Confidence 9 555 699999999999999984 4455666 6899999999994 6799999999999999998 5788999
Q ss_pred cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 407 FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 407 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+|...|.+++|. +.+|++|+.||.|++||+...
T Consensus 332 ~~~h~~~v~~~~~~---~~~l~sg~~dg~i~vwd~~~~ 366 (435)
T 1p22_A 332 LEGHEELVRCIRFD---NKRIVSGAYDGKIKVWDLVAA 366 (435)
T ss_dssp ECCCSSCEEEEECC---SSEEEEEETTSCEEEEEHHHH
T ss_pred EeCCcCcEEEEEec---CCEEEEEeCCCcEEEEECCCC
Confidence 99999999999993 368999999999999998655
No 104
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=2.9e-32 Score=289.58 Aligned_cols=309 Identities=15% Similarity=0.141 Sum_probs=226.5
Q ss_pred ccCCCCCeeeEEEEecCCCCCcccCcceEEEEeecCCC--CCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhc
Q psy4510 78 EAQTGAPCLSFDIIKDELGDERTAYPQTLYAVAGTQSK--KFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHN 155 (812)
Q Consensus 78 ~~~~~~p~ls~~~~~d~~~~~~~~~~~~~~~~~gt~~~--~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 155 (812)
.+++..|..++.|.||. .+++.|.... ..-.|.|.+.++..-... ..
T Consensus 10 ~~~~g~PV~sv~fs~dg-----------~~l~sGGg~~~~sGi~N~i~~w~~~~~~~~---------------~~----- 58 (365)
T 4h5i_A 10 SYNVGYPAYGAKFLNND-----------TLLVAGGGGEGNNGIPNKLTVLRVDPTKDT---------------EK----- 58 (365)
T ss_dssp EEECSSCEEEEEEEETT-----------EEEEEEECCSSSSSCCEEEEEEEECTTSSS---------------HH-----
T ss_pred ecCCCCCEEEEEEeCCC-----------cEEEEECCCccccCCCCEEEEEEEcCCCcc---------------ee-----
Confidence 45688999999999985 3567664321 223689999987411000 00
Q ss_pred ccCCCCCCCCCCCccCcCCCCCceEEEEeCCCCCCeEEE-----------ecCCCcEEEEccCCCCccccc-----cccc
Q psy4510 156 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLAT-----------GDCKRNIHIWTPREAGAWQVD-----QKPL 219 (812)
Q Consensus 156 ~~~~~~~~~~~~~i~~~~gh~~~i~~~~~sp~~~~~lat-----------~~~dg~v~iwd~~~~~~~~~~-----~~~l 219 (812)
..+.......+.+|.+.|.++++++ +.+++ |+.|+.+++|++......... ....
T Consensus 59 ------~~~~~~~~~~l~~~~~~v~s~~~~~---~~~~~g~~~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~ 129 (365)
T 4h5i_A 59 ------EQFHILSEFALEDNDDSPTAIDASK---GIILVGCNENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDAS 129 (365)
T ss_dssp ------HHEEEEEEEECCTTSCCCCEEEEET---TEEEEECCCCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCC
T ss_pred ------eeeeeeeEEEccCCCCceEEEEeCC---CEEEEEECCCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeec
Confidence 0000011122447778888887644 45554 456888999998765432111 1223
Q ss_pred CCCCCCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
..+...+++++|||||++|++++ .|++|+|||+.++ +++..+. |.+.|.+++|+|++ .+|++++. +.+
T Consensus 130 ~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~-------~~~~~~~-~~~~V~~v~fspdg-~~l~s~s~-~~~ 199 (365)
T 4h5i_A 130 TNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL-------TEKFEIE-TRGEVKDLHFSTDG-KVVAYITG-SSL 199 (365)
T ss_dssp CCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT-------EEEEEEE-CSSCCCEEEECTTS-SEEEEECS-SCE
T ss_pred CCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC-------cEEEEeC-CCCceEEEEEccCC-ceEEeccc-eeE
Confidence 34566799999999999987544 7899999999885 6666664 77889999999999 78999885 557
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC----eEEEEECCCCCcccc-eeecCCcCCCCeEEE
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL----SIRIWDTRVINTKSC-MLTLPNAHTSDVNVI 372 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg----~i~iwd~~~~~~~~~-~~~~~~~~~~~v~~l 372 (812)
++|+..++.. .......+|...|.+++|+|+++ ++++++.|+ .+++|++........ ...+ ..|...|+++
T Consensus 200 ~~~~~~~~~~--~~~~~~~~~~~~v~~v~fspdg~-~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~V~~~ 275 (365)
T 4h5i_A 200 EVISTVTGSC--IARKTDFDKNWSLSKINFIADDT-VLIAASLKKGKGIVLTKISIKSGNTSVLRSKQV-TNRFKGITSM 275 (365)
T ss_dssp EEEETTTCCE--EEEECCCCTTEEEEEEEEEETTE-EEEEEEESSSCCEEEEEEEEETTEEEEEEEEEE-ESSCSCEEEE
T ss_pred EEEEeccCcc--eeeeecCCCCCCEEEEEEcCCCC-EEEEEecCCcceeEEeecccccceecceeeeee-cCCCCCeEeE
Confidence 7777766652 12345567889999999999998 588888877 688899875432221 2233 6788999999
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|+|+|++||+|+.|+.|+|||++ +++++.. +.+|..+|++|+|+|++ ++|++|+.|++|+|||+...
T Consensus 276 ~~Spdg~~lasgs~D~~V~iwd~~---~~~~~~~~~~gH~~~V~~v~fSpdg-~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 276 DVDMKGELAVLASNDNSIALVKLK---DLSMSKIFKQAHSFAITEVTISPDS-TYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EECTTSCEEEEEETTSCEEEEETT---TTEEEEEETTSSSSCEEEEEECTTS-CEEEEEETTSEEEEEECCTT
T ss_pred EECCCCCceEEEcCCCEEEEEECC---CCcEEEEecCcccCCEEEEEECCCC-CEEEEEeCCCeEEEEEcCCC
Confidence 999999999999999999999998 4677776 47899999999999997 69999999999999999654
No 105
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=100.00 E-value=4.9e-31 Score=278.52 Aligned_cols=303 Identities=11% Similarity=0.046 Sum_probs=238.8
Q ss_pred ccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCC-EEEEEeCCCc
Q psy4510 218 PLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPG-VLATGDCKRN 296 (812)
Q Consensus 218 ~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~-~l~sg~~dg~ 296 (812)
...+|.+.|++++|+|++++|++++.|+.|++|++..+. ...+...+.+|...|.+++|+|++ . +|++|+.||.
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~ 80 (342)
T 1yfq_A 6 IEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQA----KNVDLLQSLRYKHPLLCCNFIDNT-DLQIYVGTVQGE 80 (342)
T ss_dssp CSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTT----TEEEEEEEEECSSCEEEEEEEESS-SEEEEEEETTSC
T ss_pred cccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCC----ccccceeeeecCCceEEEEECCCC-CcEEEEEcCCCe
Confidence 456899999999999999999999999999999998741 112356677899999999999998 8 9999999999
Q ss_pred EEEEeC-CCCCcceeccccccC--CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc------ccceeecCCcCCC
Q psy4510 297 IHIWTP-REAGAWQVDQKPLVG--HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT------KSCMLTLPNAHTS 367 (812)
Q Consensus 297 i~vwd~-~~~~~~~~~~~~~~~--h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~------~~~~~~~~~~~~~ 367 (812)
|++|++ .++. ...+.+ |...|.+++|+| +. +|++++.||.|++||++.... ..++..+ .|..
T Consensus 81 i~~wd~~~~~~-----~~~~~~~~~~~~v~~l~~~~-~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~--~~~~ 151 (342)
T 1yfq_A 81 ILKVDLIGSPS-----FQALTNNEANLGICRICKYG-DD-KLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNT--KVKN 151 (342)
T ss_dssp EEEECSSSSSS-----EEECBSCCCCSCEEEEEEET-TT-EEEEEETTSEEEEECHHHHTTBCEEEEESCSSSS--SSCC
T ss_pred EEEEEeccCCc-----eEeccccCCCCceEEEEeCC-CC-EEEEEcCCCeEEEEcccccccccccccCCeeeEE--eeCC
Confidence 999999 7764 356777 999999999999 66 799999999999999984100 3334444 3889
Q ss_pred CeEEEEEcCCCCEEEEEeCCCcEEEEecCC-CCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 368 DVNVISWNRTEPLIVSGGDDGCIHVWDLRR-FKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 368 ~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~-~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|.+++|++++ +++|+.+|.|++||++. .. .........|...|.+++|+| ++ .+|++++.||.|++|++....
T Consensus 152 ~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~i~~i~~~~~~~-~~l~~~~~dg~i~i~~~~~~~ 227 (342)
T 1yfq_A 152 KIFTMDTNSSR--LIVGMNNSQVQWFRLPLCED-DNGTIEESGLKYQIRDVALLPKEQ-EGYACSSIDGRVAVEFFDDQG 227 (342)
T ss_dssp CEEEEEECSSE--EEEEESTTEEEEEESSCCTT-CCCEEEECSCSSCEEEEEECSGGG-CEEEEEETTSEEEEEECCTTC
T ss_pred ceEEEEecCCc--EEEEeCCCeEEEEECCcccc-ccceeeecCCCCceeEEEECCCCC-CEEEEEecCCcEEEEEEcCCC
Confidence 99999999887 99999999999999985 22 223445567889999999999 86 699999999999999997651
Q ss_pred chhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 446 DSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 446 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
... . ...+..+ ..+..
T Consensus 228 ~~~-------------~-------~~~~~~~--------------------------------------------~~~~~ 243 (342)
T 1yfq_A 228 DDY-------------N-------SSKRFAF--------------------------------------------RCHRL 243 (342)
T ss_dssp CST-------------T-------CTTCEEE--------------------------------------------ECCCC
T ss_pred ccc-------------c-------cccceee--------------------------------------------ecccc
Confidence 000 0 0000000 00000
Q ss_pred CCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEE
Q psy4510 526 LPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAG 605 (812)
Q Consensus 526 ~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~ 605 (812)
......|...|.+++|+|++++|+++
T Consensus 244 ------------------------------------------------------~~~~~~~~~~i~~~~~s~~~~~l~~~ 269 (342)
T 1yfq_A 244 ------------------------------------------------------NLKDTNLAYPVNSIEFSPRHKFLYTA 269 (342)
T ss_dssp ------------------------------------------------------CTTCCSSCCCEEEEEECTTTCCEEEE
T ss_pred ------------------------------------------------------cccccccceeEEEEEEcCCCCEEEEe
Confidence 00011355689999999999999998
Q ss_pred eecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC-CCceEEEEeCCCCCCeEEecCCCce-EEE
Q psy4510 606 VWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGDCKRN-IHI 683 (812)
Q Consensus 606 ~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh-~~~V~~l~~sp~~~~~las~s~Dg~-v~i 683 (812)
+.||.|++||+.++. ++..+.+| ...|++++ | ++.+|++++.||+ .+.
T Consensus 270 --~~dg~i~vwd~~~~~-------------------------~~~~~~~~h~~~v~~~~--~-~~~~l~s~s~Dg~~~~~ 319 (342)
T 1yfq_A 270 --GSDGIISCWNLQTRK-------------------------KIKNFAKFNEDSVVKIA--C-SDNILCLATSDDTFKTN 319 (342)
T ss_dssp --ETTSCEEEEETTTTE-------------------------EEEECCCCSSSEEEEEE--E-CSSEEEEEEECTHHHHC
T ss_pred --cCCceEEEEcCccHh-------------------------HhhhhhcccCCCceEec--C-CCCeEEEEecCCccccc
Confidence 899999999999876 67788998 99999999 8 7889999999999 666
Q ss_pred Eec
Q psy4510 684 WTP 686 (812)
Q Consensus 684 Wd~ 686 (812)
|..
T Consensus 320 ~~~ 322 (342)
T 1yfq_A 320 AAI 322 (342)
T ss_dssp SSS
T ss_pred ccc
Confidence 653
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=100.00 E-value=1.3e-30 Score=284.89 Aligned_cols=287 Identities=21% Similarity=0.349 Sum_probs=232.0
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
..+|...|.+++| ++++|++|+.||.|++||+.++ +.+..+.+|.+.|.+++| ++ .+|++|+.||+|+
T Consensus 129 ~~~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~-------~~~~~~~~h~~~v~~l~~--~~-~~l~sg~~dg~i~ 196 (435)
T 1p22_A 129 RSETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTL-------ECKRILTGHTGSVLCLQY--DE-RVIITGSSDSTVR 196 (435)
T ss_dssp CCSSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSC-------CEEEEECCCSSCEEEEEC--CS-SEEEEEETTSCEE
T ss_pred ccCCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCC-------eEEEEEcCCCCcEEEEEE--CC-CEEEEEcCCCeEE
Confidence 3467778998887 7899999999999999999875 778899999999999999 44 7999999999999
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+||+.++. ....+.+|...|.+++|++ . ++++|+.||.|++||++..........+ .+|...|.+++| ++
T Consensus 197 vwd~~~~~----~~~~~~~h~~~v~~l~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~~~-~~~~~~v~~~~~--~~ 266 (435)
T 1p22_A 197 VWDVNTGE----MLNTLIHHCEAVLHLRFNN--G-MMVTCSKDRSIAVWDMASPTDITLRRVL-VGHRAAVNVVDF--DD 266 (435)
T ss_dssp EEESSSCC----EEEEECCCCSCEEEEECCT--T-EEEEEETTSCEEEEECSSSSCCEEEEEE-CCCSSCEEEEEE--ET
T ss_pred EEECCCCc----EEEEEcCCCCcEEEEEEcC--C-EEEEeeCCCcEEEEeCCCCCCceeeeEe-cCCCCcEEEEEe--CC
Confidence 99999887 5677889999999999975 3 6999999999999999865433222334 789999999999 67
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhcc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKD 458 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~ 458 (812)
++|++|+.||.|++||++ .+..+..+.+|...|.++.|++ .++++|+.||.|++||+.+...
T Consensus 267 ~~l~s~~~dg~i~vwd~~---~~~~~~~~~~~~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~------------ 328 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTS---TCEFVRTLNGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGAC------------ 328 (435)
T ss_dssp TEEEEEETTSEEEEEETT---TCCEEEEEECCSSCEEEEEEET---TEEEEEETTSCEEEEETTTCCE------------
T ss_pred CEEEEEeCCCeEEEEECC---cCcEEEEEcCCCCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCE------------
Confidence 899999999999999998 5678899999999999999953 5899999999999999976521
Q ss_pred CCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCc
Q psy4510 459 LPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGF 538 (812)
Q Consensus 459 ~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~ 538 (812)
.
T Consensus 329 -----~-------------------------------------------------------------------------- 329 (435)
T 1p22_A 329 -----L-------------------------------------------------------------------------- 329 (435)
T ss_dssp -----E--------------------------------------------------------------------------
T ss_pred -----E--------------------------------------------------------------------------
Confidence 0
Q ss_pred eEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEec
Q psy4510 539 NIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDL 618 (812)
Q Consensus 539 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~ 618 (812)
..+.+|...|.+++| ++.+++++ +.||.|++||+
T Consensus 330 ------------------------------------------~~~~~h~~~v~~~~~--~~~~l~sg--~~dg~i~vwd~ 363 (435)
T 1p22_A 330 ------------------------------------------RVLEGHEELVRCIRF--DNKRIVSG--AYDGKIKVWDL 363 (435)
T ss_dssp ------------------------------------------EEECCCSSCEEEEEC--CSSEEEEE--ETTSCEEEEEH
T ss_pred ------------------------------------------EEEeCCcCcEEEEEe--cCCEEEEE--eCCCcEEEEEC
Confidence 012234446667776 67788888 89999999999
Q ss_pred cccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
.+..... ......++..+.+|.+.|++++| ++.+|++++.||+|++||+.++
T Consensus 364 ~~~~~~~----------------~~~~~~~~~~~~~h~~~v~~l~~---~~~~l~s~s~Dg~i~iwd~~~~ 415 (435)
T 1p22_A 364 VAALDPR----------------APAGTLCLRTLVEHSGRVFRLQF---DEFQIVSSSHDDTILIWDFLND 415 (435)
T ss_dssp HHHTSTT----------------SCTTTTEEEEECCCSSCCCCEEE---CSSCEEECCSSSEEEEEC----
T ss_pred CCCCCcc----------------ccccchheeeccCCCCCeEEEEe---CCCEEEEEeCCCEEEEEECCCC
Confidence 8764210 00112267788999999999999 3468999999999999988653
No 107
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=4.7e-31 Score=281.61 Aligned_cols=292 Identities=13% Similarity=0.163 Sum_probs=230.3
Q ss_pred CCCccCcCCCCCceEEEEeCCCC---CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 166 TPPLFSFSGHLTEGFAMDWSSTE---PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 166 ~~~i~~~~gh~~~i~~~~~sp~~---~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
.+.+..+.+|.+.|++++|+| + |++||+|+.||.|+||++.+... .....+.+|...|++++|+|++++|++++
T Consensus 29 ~~~~~~~~~h~~~v~~~~~~~-~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~ 105 (368)
T 3mmy_A 29 MKDIEVTSSPDDSIGCLSFSP-PTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGSKVFTAS 105 (368)
T ss_dssp TCCEECSSCCSSCEEEEEECC-TTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSSEEEEEE
T ss_pred cceeEeccCCCCceEEEEEcC-CCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCCEEEEEc
Confidence 456667779999999999999 6 69999999999999999987332 13367889999999999999999999999
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEe--cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDW--SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN 320 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~ 320 (812)
.|+.|++||+.++ . ...+.+|...|.+++| +|++ .+|++|+.||.|++||+.++. ....+..+.
T Consensus 106 ~dg~v~iwd~~~~-------~-~~~~~~~~~~v~~~~~~~~~~~-~~l~~~~~dg~i~vwd~~~~~----~~~~~~~~~- 171 (368)
T 3mmy_A 106 CDKTAKMWDLSSN-------Q-AIQIAQHDAPVKTIHWIKAPNY-SCVMTGSWDKTLKFWDTRSSN----PMMVLQLPE- 171 (368)
T ss_dssp TTSEEEEEETTTT-------E-EEEEEECSSCEEEEEEEECSSC-EEEEEEETTSEEEEECSSCSS----CSEEEECSS-
T ss_pred CCCcEEEEEcCCC-------C-ceeeccccCceEEEEEEeCCCC-CEEEEccCCCcEEEEECCCCc----EEEEEecCC-
Confidence 9999999999874 3 4456789999999999 8887 789999999999999999876 445555443
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC----EEEEEeCCCcEEEEecC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP----LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~----~l~sg~~dg~i~iwd~~ 396 (812)
.+.++.+.+. .+++++.++.+++|+++.... ........+...+.++++.+... .+++|+.||.|++||++
T Consensus 172 ~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~ 246 (368)
T 3mmy_A 172 RCYCADVIYP---MAVVATAERGLIVYQLENQPS--EFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYIN 246 (368)
T ss_dssp CEEEEEEETT---EEEEEEGGGCEEEEECSSSCE--EEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESS
T ss_pred CceEEEecCC---eeEEEeCCCcEEEEEeccccc--hhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecC
Confidence 6777777653 588899999999999986432 23333344555667776666554 39999999999999998
Q ss_pred CCCCCCceEEcccCCC------------CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 397 RFKKGSSVATFKHHTA------------PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 397 ~~~~~~~~~~~~~h~~------------~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
.......+..+..|.. +|++++|+|++ .+|++++.||.|++||+.... .+.
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-~~l~s~~~dg~i~iwd~~~~~----------------~~~ 309 (368)
T 3mmy_A 247 PPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVH-GTLATVGSDGRFSFWDKDART----------------KLK 309 (368)
T ss_dssp CSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTT-CCEEEEETTSCEEEEETTTTE----------------EEE
T ss_pred CCCccccceeeeeeecccccccccccccceEEEEEecCC-CEEEEEccCCeEEEEECCCCc----------------EEE
Confidence 5322256777777766 79999999987 689999999999999998763 222
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
....+...|.+++|+|++..+++++.++....
T Consensus 310 ~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~ 341 (368)
T 3mmy_A 310 TSEQLDQPISACCFNHNGNIFAYASSYDWSKG 341 (368)
T ss_dssp ECCCCSSCEEEEEECTTSSCEEEEECCCSTTC
T ss_pred EecCCCCCceEEEECCCCCeEEEEeccccccc
Confidence 33344568999999999876666665543333
No 108
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=100.00 E-value=2e-30 Score=314.43 Aligned_cols=474 Identities=9% Similarity=0.012 Sum_probs=327.7
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------CceE
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------FQLA 248 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~~i~ 248 (812)
+.+.+...+||| +.||.++. +.|++|++.+++ ...+.+|...|.+++|||||++|+.++.+ ..|.
T Consensus 13 ~~~~~~~~~~S~---~~iaf~~~-~~l~~~~~~gg~-----~~~lt~~~~~v~~~~~SPDG~~la~~s~~~~~~~~~~i~ 83 (1045)
T 1k32_A 13 MPNLLLNPDIHG---DRIIFVCC-DDLWEHDLKSGS-----TRKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLY 83 (1045)
T ss_dssp CCCCCEEEEEET---TEEEEEET-TEEEEEETTTCC-----EEEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEE
T ss_pred ccceEeCcEEeC---CEEEEEEC-CcEEEEECCCCc-----EEEeeeCCCcccCeEECCCCCEEEEEEeeccCCCCCeEE
Confidence 456788999997 47777765 689999998764 35677899999999999999999988643 3789
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcE-------EEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCccee-----
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEG-------FAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQV----- 310 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v-------~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~----- 310 (812)
+|++.++ ....+..|...+ .+++|+|++ .++++++.+ ..|++|++..+.....
T Consensus 84 ~~d~~~g--------~~~~lt~~~~~~~~~~~~~~~~~~SpDg-~ll~~~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~ 154 (1045)
T 1k32_A 84 FYNGENG--------EIKRITYFSGKSTGRRMFTDVAGFDPDG-NLIISTDAMQPFSSMTCLYRVENDGINFVPLNLGPA 154 (1045)
T ss_dssp EEETTTT--------EEEECCCCCEEEETTEECSEEEEECTTC-CEEEEECTTSSSTTCCEEEEEEGGGTEEEECCSCSC
T ss_pred EEECCCC--------CeEEcccCCCcccccccccccccCCCCC-EEEEEECCcCCCcccceEEEEECCCCCeEEecCCCc
Confidence 9998774 356788888888 999999999 488888754 3577787754431100
Q ss_pred ----------------------------------------ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC
Q psy4510 311 ----------------------------------------DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 311 ----------------------------------------~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
....+.+|...+.++.|+++ .++++++.++.++||.+.
T Consensus 155 ~~~~~spG~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~~~~~~~l~~~~~~v~~~~~s~d--~l~~~~~~dg~~~l~~~~ 232 (1045)
T 1k32_A 155 THILFADGRRVIGRNTFELPHWKGYRGGTRGKIWIEVNSGAFKKIVDMSTHVSSPVIVGH--RIYFITDIDGFGQIYSTD 232 (1045)
T ss_dssp SEEEEETTEEEEEESCSCCTTSTTCCSTTCCEEEEEEETTEEEEEECCSSCCEEEEEETT--EEEEEECTTSSCEEEEEE
T ss_pred ceeeeCCCEEEEeccCCCccccccccCCCcCCEEEECCCCCeEECcCCCCcccceEEeCC--EEEEEEeccCceEEEEEe
Confidence 01123467788899999987 478888889999999875
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-----------CCCCEEEEEE
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH-----------HTAPVTTVEW 419 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-----------h~~~v~~v~~ 419 (812)
... .....+ ..|. .+.+++|+|+|+.|+.+ .++.|++||+. ...+..+.. |...+.+++|
T Consensus 233 ~~g--~~~~~l-~~~~-~~~~~~~SpDG~~la~~-~~~~i~~~d~~----~~~l~~l~~~~~~~~~~~~~~~~~v~~~~~ 303 (1045)
T 1k32_A 233 LDG--KDLRKH-TSFT-DYYPRHLNTDGRRILFS-KGGSIYIFNPD----TEKIEKIEIGDLESPEDRIISIPSKFAEDF 303 (1045)
T ss_dssp TTS--CSCEEC-CCCC-SSCEEEEEESSSCEEEE-ETTEEEEECTT----TCCEEECCCCCCCBCCSEEEECGGGGEEEE
T ss_pred CCC--CcceEe-cCCC-CcceeeEcCCCCEEEEE-eCCEEEEecCC----ceEeeeeccCcccccccccccccccceeee
Confidence 321 122333 3333 46678999999988887 48999999983 233445544 3446899999
Q ss_pred c-cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-ceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 420 H-PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-EIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 420 ~-p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
+ |++ ..|++++ ++.|.+|++.... ......+.. .+..++|+ ++..++.++. ...+|
T Consensus 304 S~pdG-~~la~~~-~~~i~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~s-dg~~l~~~s~--~~~l~ 361 (1045)
T 1k32_A 304 SPLDG-DLIAFVS-RGQAFIQDVSGTY-----------------VLKVPEPLRIRYVRRGGD-TKVAFIHGTR--EGDFL 361 (1045)
T ss_dssp EECGG-GCEEEEE-TTEEEEECTTSSB-----------------EEECSCCSCEEEEEECSS-SEEEEEEEET--TEEEE
T ss_pred cCCCC-CEEEEEE-cCEEEEEcCCCCc-----------------eEEccCCCcceEEeeeEc-CCCeEEEEEC--CCceE
Confidence 9 997 4666666 7889999987652 222233334 68899999 7654444443 33444
Q ss_pred --EeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccC
Q psy4510 498 --RTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRK 575 (812)
Q Consensus 498 --~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (812)
......... ....+...+..++|+|++ ..++.+.... .+. ++++..+
T Consensus 362 ~~~d~~~~~~~--~l~~~~~~~~~~~~SpDG--~~la~~~~~~-~v~---~~d~~tg----------------------- 410 (1045)
T 1k32_A 362 GIYDYRTGKAE--KFEENLGNVFAMGVDRNG--KFAVVANDRF-EIM---TVDLETG----------------------- 410 (1045)
T ss_dssp EEEETTTCCEE--ECCCCCCSEEEEEECTTS--SEEEEEETTS-EEE---EEETTTC-----------------------
T ss_pred EEEECCCCCce--EecCCccceeeeEECCCC--CEEEEECCCC-eEE---EEECCCC-----------------------
Confidence 222222221 222445689999999994 4444333321 222 2222221
Q ss_pred CCccceEEecccceEEEEEEeccCCeEEEEeec--------CcceEEEEeccccccccCCcccccccccccCCCCCCCCC
Q psy4510 576 DPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG--------EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTP 647 (812)
Q Consensus 576 ~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~--------~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 647 (812)
........|.+.+..++|||+|++|++++.. .++.|++||+.++.
T Consensus 411 --~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~------------------------- 463 (1045)
T 1k32_A 411 --KPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK------------------------- 463 (1045)
T ss_dssp --CEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-------------------------
T ss_pred --ceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-------------------------
Confidence 1233445788889999999999999887321 13599999998764
Q ss_pred CeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEec-----------------------------------------
Q psy4510 648 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTP----------------------------------------- 686 (812)
Q Consensus 648 ~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~----------------------------------------- 686 (812)
+..+.+|...+.+++|+| +++.|++++.++..++|+.
T Consensus 464 -~~~l~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 541 (1045)
T 1k32_A 464 -IFAATTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYD 541 (1045)
T ss_dssp -EEECSCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCC
T ss_pred -EEEeeCCCcccCCceEcC-CCCEEEEEecccCCcCcchhccccccccCceeEEEEeCCCCCCccccCcCcccccccccc
Confidence 455677888899999999 7888888887766555542
Q ss_pred -CC-----------CceeEEEEecCCCCEEEe-------------ecCCCeEEEeecCCCCCcccccccccCCCcceeEe
Q psy4510 687 -RE-----------AGAWSVYLYTNRFGVLAT-------------GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 741 (812)
Q Consensus 687 -~~-----------~~~~~~~~~s~dg~~las-------------gs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l 741 (812)
.+ ......+.++|||+++++ ......|++||+.+++. ..+. ..|.++
T Consensus 542 ~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~g~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l~---~~v~~~ 613 (1045)
T 1k32_A 542 LNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLKYDVKTRKV-----TEVK---NNLTDL 613 (1045)
T ss_dssp CTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCCCSHHHHHHCCCCCEEEEEEETTTCCE-----EEEE---EEEEEE
T ss_pred ccCHhHceEEcCCCCCChhheEEcCCCeEEEEecccCcccccccccCCCceEEEEECCCCcE-----EEee---cCcceE
Confidence 11 011234568999987775 12355788899888763 2232 668999
Q ss_pred EEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 742 QWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 742 ~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
+|||||+ .|++++.| .|++||+..++
T Consensus 614 ~~S~DG~-~l~~~~~~-~i~~~d~~~~~ 639 (1045)
T 1k32_A 614 RLSADRK-TVMVRKDD-GKIYTFPLEKP 639 (1045)
T ss_dssp EECTTSC-EEEEEETT-SCEEEEESSCT
T ss_pred EECCCCC-EEEEEcCC-cEEEEeCccCc
Confidence 9999999 68888766 89999998876
No 109
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.98 E-value=1.5e-30 Score=277.62 Aligned_cols=169 Identities=17% Similarity=0.307 Sum_probs=141.4
Q ss_pred CCCCceEEcCCCCcEEEEEecCCC--CCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEE
Q psy4510 261 PTPPLFSFSGHLTEGFAMDWSSTE--PGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 261 ~~~~~~~~~~h~~~v~~l~~sp~~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~ 338 (812)
+.+++..+.+|.+.|.+++|+|++ ..+|++|+.||.|++|++.+... .....+.+|...|.+++|+|+++ +|+++
T Consensus 28 ~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~--~~~~~~~~h~~~v~~~~~~~~~~-~l~s~ 104 (368)
T 3mmy_A 28 PMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ--TIPKAQQMHTGPVLDVCWSDDGS-KVFTA 104 (368)
T ss_dssp TTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC--EEEEEEEECSSCEEEEEECTTSS-EEEEE
T ss_pred CcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc--eeEEEeccccCCEEEEEECcCCC-EEEEE
Confidence 347778889999999999999994 37999999999999999987332 12366788999999999999998 69999
Q ss_pred ECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE--cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE
Q psy4510 339 SVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW--NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT 416 (812)
Q Consensus 339 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~ 416 (812)
+.||.|++||+++. ..+. + ..|...|++++| ++++++|++|+.||.|++||++ .++.+..+..|. .+.+
T Consensus 105 ~~dg~v~iwd~~~~---~~~~-~-~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~---~~~~~~~~~~~~-~~~~ 175 (368)
T 3mmy_A 105 SCDKTAKMWDLSSN---QAIQ-I-AQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR---SSNPMMVLQLPE-RCYC 175 (368)
T ss_dssp ETTSEEEEEETTTT---EEEE-E-EECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS---CSSCSEEEECSS-CEEE
T ss_pred cCCCcEEEEEcCCC---Ccee-e-ccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC---CCcEEEEEecCC-CceE
Confidence 99999999999843 2333 3 579999999999 8999999999999999999998 456777777664 6777
Q ss_pred EEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 417 VEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 417 v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+.+ ..+++++.++.+.+|++...
T Consensus 176 ~~~~~---~~~~~~~~~~~i~~~~~~~~ 200 (368)
T 3mmy_A 176 ADVIY---PMAVVATAERGLIVYQLENQ 200 (368)
T ss_dssp EEEET---TEEEEEEGGGCEEEEECSSS
T ss_pred EEecC---CeeEEEeCCCcEEEEEeccc
Confidence 77775 37888888999999999765
No 110
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=1.5e-30 Score=281.29 Aligned_cols=305 Identities=17% Similarity=0.219 Sum_probs=235.5
Q ss_pred CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC-CCCCEEEEEeCCCcEEEEeC
Q psy4510 225 SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS-TEPGVLATGDCKRNIHIWTP 302 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp-~~~~~l~sg~~dg~i~vwd~ 302 (812)
....++++|+...++ +++.+|.|+||++..... ....+..+.+|.+.|.+++|+| ++ .+|++|+.||+|++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~---~~~~~~~~~~h~~~V~~~~~~p~~~-~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGR---VDKNVPLVCGHTAPVLDIAWCPHND-NVIASGSEDCTVMVWEI 111 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEE---CCTTCCCBCCCSSCEEEEEECTTCT-TEEEEEETTSEEEEEEC
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCC---CCCCCceEecCCCCEEEEEeCCCCC-CEEEEEeCCCeEEEEEc
Confidence 345678888776544 578899999999865310 1145567889999999999999 66 89999999999999999
Q ss_pred CCCCcce---eccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCC
Q psy4510 303 REAGAWQ---VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTE 378 (812)
Q Consensus 303 ~~~~~~~---~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~ 378 (812)
.++.... .....+.+|...|.+++|+|++.++|++++.||.|++||+++ ..++..+. ..|...|.+++|+|++
T Consensus 112 ~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 112 PDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGT---GAAVLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp CTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTT---TEEEEEECTTTCCSCEEEEEECTTS
T ss_pred cCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCC---CCccEEEecCCCCCceEEEEECCCC
Confidence 8874210 145677889999999999999866899999999999999984 34455543 5789999999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceEEc-ccCCCC-EEEEEEccCCCcEEEEE---ECCCCEEEEEcCCCCchhHHHhh
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAP-VTTVEWHPTESSTFASG---GADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~-v~~v~~~p~~~~~l~s~---~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
++|++|+.||.|++||++ .+..+..+ ..|.+. +.++.|+|++ .+|++| +.|+.|++||+......
T Consensus 189 ~~l~~~~~d~~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~g~~~~~d~~i~iwd~~~~~~~------ 258 (402)
T 2aq5_A 189 ALICTSCRDKRVRVIEPR---KGTVVAEKDRPHEGTRPVHAVFVSEG-KILTTGFSRMSERQVALWDTKHLEEP------ 258 (402)
T ss_dssp SCEEEEETTSEEEEEETT---TTEEEEEEECSSCSSSCCEEEECSTT-EEEEEEECTTCCEEEEEEETTBCSSC------
T ss_pred CEEEEEecCCcEEEEeCC---CCceeeeeccCCCCCcceEEEEcCCC-cEEEEeccCCCCceEEEEcCccccCC------
Confidence 999999999999999998 46677777 788776 8999999986 688888 68999999999865210
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
+.
T Consensus 259 ---------~~--------------------------------------------------------------------- 260 (402)
T 2aq5_A 259 ---------LS--------------------------------------------------------------------- 260 (402)
T ss_dssp ---------SE---------------------------------------------------------------------
T ss_pred ---------ce---------------------------------------------------------------------
Confidence 00
Q ss_pred eCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceE
Q psy4510 534 ANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKV 613 (812)
Q Consensus 534 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I 613 (812)
.....|...+.+++|+|++++++++ ++.||.|
T Consensus 261 -----------------------------------------------~~~~~~~~~v~~~~~s~~~~~l~~~-g~~dg~i 292 (402)
T 2aq5_A 261 -----------------------------------------------LQELDTSSGVLLPFFDPDTNIVYLC-GKGDSSI 292 (402)
T ss_dssp -----------------------------------------------EEECCCCSSCEEEEEETTTTEEEEE-ETTCSCE
T ss_pred -----------------------------------------------EEeccCCCceeEEEEcCCCCEEEEE-EcCCCeE
Confidence 0001122356778899999988754 2679999
Q ss_pred EEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC--CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce
Q psy4510 614 GIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA 691 (812)
Q Consensus 614 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~ 691 (812)
++|++.++.. .+..+.. |...|.+++|+| ++.++++ .++.+++|++.++.+
T Consensus 293 ~i~d~~~~~~------------------------~~~~l~~~~~~~~v~~~~~sp-~~~~~~s--~~~~~~~~~l~~~~~ 345 (402)
T 2aq5_A 293 RYFEITSEAP------------------------FLHYLSMFSSKESQRGMGYMP-KRGLEVN--KCEIARFYKLHERKC 345 (402)
T ss_dssp EEEEECSSTT------------------------CEEEEEEECCSSCCSEEEECC-GGGSCGG--GTEEEEEEEEETTEE
T ss_pred EEEEecCCCc------------------------ceEeecccccCCcccceEEec-cccccee--cceeEEEEEcCCCcE
Confidence 9999988751 1333333 558999999999 6777765 466999999988776
Q ss_pred eEEEEecC
Q psy4510 692 WSVYLYTN 699 (812)
Q Consensus 692 ~~~~~~s~ 699 (812)
..+.+.-|
T Consensus 346 ~~i~~~~p 353 (402)
T 2aq5_A 346 EPIAMTVP 353 (402)
T ss_dssp EEEEEECC
T ss_pred EEEEEEcc
Confidence 65555444
No 111
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=3.5e-30 Score=276.09 Aligned_cols=271 Identities=21% Similarity=0.341 Sum_probs=214.5
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEEC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSV 340 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~ 340 (812)
+++..+.+|.+.|.+++|+|++ .+|++|+.||.|++|++.... ......+.+|...|++++|+|+ +. +|++|+.
T Consensus 2 ~~~~~~~~h~~~v~~~~~s~~~-~~l~~~~~dg~i~iw~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~ 77 (379)
T 3jrp_A 2 SMVVIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSY 77 (379)
T ss_dssp ---CCEEECCCCEEEEEECSSS-SEEEEEETTSCEEEEEEETTE--EEEEEEECCCSSCEEEEEECCGGGCS-EEEEEET
T ss_pred CccEEecCCcccEEEEEEcCCC-CEEEEEECCCcEEEEecCCCc--ceeeeEecCCCCcEEEEEeCCCCCCC-EEEEecc
Confidence 4567789999999999999998 799999999999999997432 1245677889999999999987 66 7999999
Q ss_pred CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 341 DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
||.|++||++... ...+..+ ..|...|.+++|+|+ +.+|++|+.||.|++||++... ......+..|...|.+++
T Consensus 78 dg~v~iwd~~~~~-~~~~~~~-~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~-~~~~~~~~~~~~~v~~~~ 154 (379)
T 3jrp_A 78 DGKVLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHAIGVNSAS 154 (379)
T ss_dssp TSCEEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS-CCCEEEEECCTTCEEEEE
T ss_pred CCEEEEEEcCCCc-eeEeeee-cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC-ceeeEEecCCCCceEEEE
Confidence 9999999998532 1134444 679999999999999 8999999999999999998632 234556778999999999
Q ss_pred EccC------------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEE
Q psy4510 419 WHPT------------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTI 486 (812)
Q Consensus 419 ~~p~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~ 486 (812)
|+|. ++.+|++++.|+.|++||++..... .
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~---------------~----------------------- 196 (379)
T 3jrp_A 155 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT---------------Y----------------------- 196 (379)
T ss_dssp ECCCC----------CTTCEEEEEETTSCEEEEEEETTTTE---------------E-----------------------
T ss_pred EcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcc---------------e-----------------------
Confidence 9994 3479999999999999998754210 0
Q ss_pred EEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCC
Q psy4510 487 ISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESE 566 (812)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 566 (812)
T Consensus 197 -------------------------------------------------------------------------------- 196 (379)
T 3jrp_A 197 -------------------------------------------------------------------------------- 196 (379)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccCCCccceEEecccceEEEEEEecc---CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCC
Q psy4510 567 GSGDEDRRKDPVMNSYFIRHRGCINRVRTCQY---GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPG 643 (812)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 643 (812)
.....+.+|...|.+++|+|+ +++++++ +.||.|++|++.+....
T Consensus 197 -----------~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~--~~dg~i~iwd~~~~~~~------------------- 244 (379)
T 3jrp_A 197 -----------VLESTLEGHSDWVRDVAWSPTVLLRSYLASV--SQDRTCIIWTQDNEQGP------------------- 244 (379)
T ss_dssp -----------EEEEEECCCSSCEEEEEECCCCSSSEEEEEE--ETTSCEEEEEESSTTSC-------------------
T ss_pred -----------eeEEEEecccCcEeEEEECCCCCCCCeEEEE--eCCCEEEEEeCCCCCcc-------------------
Confidence 001123456678899999999 7888888 89999999999886411
Q ss_pred CCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCcee
Q psy4510 644 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW 692 (812)
Q Consensus 644 ~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~ 692 (812)
....+.....|...|++++|+| ++.+|++++.||.|++|++..+..+
T Consensus 245 -~~~~~~~~~~~~~~v~~~~~s~-~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 245 -WKKTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp -CEEEESSSSCCSSCEEEEEECS-SSCCEEEEESSSSEEEEEEEETTEE
T ss_pred -ceeeeeccccCCCcEEEEEEcC-CCCEEEEecCCCcEEEEeCCCCCcc
Confidence 0002223345888999999999 7889999999999999999865443
No 112
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.98 E-value=3.7e-31 Score=284.47 Aligned_cols=290 Identities=16% Similarity=0.094 Sum_probs=187.2
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcC--------CCCEEEEEeCCC
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNR--------TEPLIVSGGDDG 388 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~--------~~~~l~sg~~dg 388 (812)
|...+....+.+++. +|++++.|++|+|||++...... .......+|...|++++|+| ++++||+|+.|+
T Consensus 88 ~~~~~~~~~~~~~~~-~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~ 166 (393)
T 4gq1_A 88 HDGDGNVNSSPVYSL-FLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDC 166 (393)
T ss_dssp ---------CCEEEE-EEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTS
T ss_pred cCCCcceeecCCCCC-EEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCC
Confidence 444444444455554 79999999999999998543211 12223379999999999998 778999999999
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL 468 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (812)
+|+|||++ ...++..+..|..+|.+++|+|++..+|++++.|++|++||+.+.+... ....
T Consensus 167 tv~~Wd~~---~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~----------------~~~~ 227 (393)
T 4gq1_A 167 TLIIWRLT---DEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAE----------------ENSQ 227 (393)
T ss_dssp EEEEEEEE---TTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----------------------
T ss_pred eEEEEECC---CCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccc----------------cccc
Confidence 99999997 4567777888999999999999987799999999999999998874210 0000
Q ss_pred CCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc
Q psy4510 469 GQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN 548 (812)
Q Consensus 469 ~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~ 548 (812)
.+.. ....+......+.
T Consensus 228 ----------~~~~------------------------------~~~~~~s~~~~~~----------------------- 244 (393)
T 4gq1_A 228 ----------TELV------------------------------KNPWLLTLNTLPL----------------------- 244 (393)
T ss_dssp -------------C------------------------------SCCCSEEEESGGG-----------------------
T ss_pred ----------cCCc------------------------------ccceEEecccccc-----------------------
Confidence 0000 0000001111110
Q ss_pred CcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEe-ccCCeEEEEeecCcceEEEEeccccccccCC
Q psy4510 549 LTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTC-QYGSTTLAGVWGEVGKVGIWDLKTALQTVDD 627 (812)
Q Consensus 549 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s-~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~ 627 (812)
.......+|...+.+++|+ ++++.++++ +.|+++++||+....
T Consensus 245 -----------------------------~~~~~~~~~~~~v~~v~~~~~dg~~l~s~--s~d~~i~vwd~~~~~----- 288 (393)
T 4gq1_A 245 -----------------------------VNTCHSSGIASSLANVRWIGSDGSGILAM--CKSGAWLRWNLFANN----- 288 (393)
T ss_dssp -----------------------------C------CCSSSCSEEEEETTTTCEEEEE--CTTSEEEEEEC---------
T ss_pred -----------------------------eeeeecccccccceeeeeecCCCCEEEEE--eCCCCEEEEECccCC-----
Confidence 0011234566678888887 799999998 899999999998875
Q ss_pred cccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEee
Q psy4510 628 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATG 707 (812)
Q Consensus 628 ~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasg 707 (812)
....+.+|...+..+.++| +.+.+...........+. +.++.++++|
T Consensus 289 --------------------~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------------~~~~~~~~sg 335 (393)
T 4gq1_A 289 --------------------DYNEISDSTMKLGPKNLLP-NVQGISLFPSLLGACPHP------------RYMDYFATAH 335 (393)
T ss_dssp -----------------------------------CCSC-SEEEECSSCCSSCCEECS------------SCTTEEEEEE
T ss_pred --------------------CCceEeeecCccccEEEcc-ccccccccCcceeEEEcc------------CCCCEEEEEE
Confidence 4556778888999999998 554554444433332222 3456678899
Q ss_pred cCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 708 DCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 708 s~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+.||+|++||+.+++. ...+.+|...|++|+|||||+ +||+++.|| +.+|++
T Consensus 336 s~Dg~V~lwd~~~~~~----~~~~~~~~~~V~svafspdG~-~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 336 SQHGLIQLINTYEKDS----NSIPIQLGMPIVDFCWHQDGS-HLAIATEGS-VLLTRL 387 (393)
T ss_dssp TTTTEEEEEETTCTTC----CEEEEECSSCEEEEEECTTSS-EEEEEESSE-EEEEEE
T ss_pred CCCCEEEEEECCCCcE----EEEecCCCCcEEEEEEcCCCC-EEEEEeCCC-eEEEEE
Confidence 9999999999998874 556788899999999999999 899998776 555544
No 113
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.9e-31 Score=307.61 Aligned_cols=261 Identities=16% Similarity=0.245 Sum_probs=217.8
Q ss_pred cCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC--CCcEEEeeCCCce
Q psy4510 170 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL--KTALQTVDDPFQL 247 (812)
Q Consensus 170 ~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~--~~~l~s~~~d~~i 247 (812)
..+.||.+.|++++|+| ++++||+|+.||.|+||++.+... .....+.+|..+|++++|+++ +++|++++.||.|
T Consensus 3 ~~l~gH~~~V~~l~~s~-dg~~latg~~dg~I~vwd~~~~~~--~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I 79 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY-YGKRLATCSSDKTIKIFEVEGETH--KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV 79 (753)
T ss_dssp -----CCCCEEEECCCS-SSCCEEEEETTTEEEEEEEETTEE--EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE
T ss_pred eecccCcceeEEEEECC-CCCeEEEEECCCcEEEEecCCCCC--ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE
Confidence 34569999999999999 999999999999999999874321 256678899999999999988 9999999999999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~ 325 (812)
++|++.++ ....+..+.+|...|.+++|+|+ + .++++|+.||.|++||+...... ....+.+|...|.++
T Consensus 80 ~vwd~~~~-----~~~~~~~~~~h~~~V~~v~~sp~~~~-~~l~sgs~dg~I~vwdl~~~~~~--~~~~~~~~~~~v~~l 151 (753)
T 3jro_A 80 LIWKEENG-----RWSQIAVHAVHSASVNSVQWAPHEYG-PLLLVASSDGKVSVVEFKENGTT--SPIIIDAHAIGVNSA 151 (753)
T ss_dssp EEEEEETT-----EEEEEEEECCCSSCEEEEEECCGGGC-SEEEEEETTSEEEEEECCSSSCC--CCEEEECCSSCEEEE
T ss_pred EEEECCCC-----cccccccccCCCCCeEEEEECCCCCC-CEEEEEeCCCcEEEEEeecCCCc--ceeEeecCCCceEEE
Confidence 99999885 22377888999999999999999 6 89999999999999999887421 244567899999999
Q ss_pred EEcCC-------------CCeEEEEEECCCeEEEEECCCCCcc-cceeecCCcCCCCeEEEEEcCC---CCEEEEEeCCC
Q psy4510 326 QWSPG-------------EKRVLASCSVDLSIRIWDTRVINTK-SCMLTLPNAHTSDVNVISWNRT---EPLIVSGGDDG 388 (812)
Q Consensus 326 ~~~p~-------------~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg 388 (812)
+|+|. +. +|++|+.||.|++||++..... .....+ .+|...|++++|+|+ +++|++|+.||
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~-~l~sgs~dg~I~iwd~~~~~~~~~~~~~~-~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg 229 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESR-KFVTGGADNLVKIWKYNSDAQTYVLESTL-EGHSDWVRDVAWSPTVLLRSYLASVSQDR 229 (753)
T ss_dssp EECCCC---------CGGGC-CEEEEETTSCEEEEEEETTTTEEEEEEEE-CCCSSCEEEEEECCCCSSSEEEEEEESSS
T ss_pred EecCcccccccccccCCCCC-EEEEEECCCeEEEEeccCCcccceeeeee-cCCCCcEEEEEeccCCCCCCEEEEEecCC
Confidence 99994 66 6999999999999999865433 233344 789999999999999 88999999999
Q ss_pred cEEEEecCCCCCC--CceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 389 CIHVWDLRRFKKG--SSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 389 ~i~iwd~~~~~~~--~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.|++||++..... ..+.....|...|++++|+|++ .+|++++.||.|++|++...
T Consensus 230 ~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg-~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 230 TCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG-NVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT-CCEEEECSSSCEECCBCCSS
T ss_pred EEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC-CEEEEEcCCCEEEEEecCCC
Confidence 9999999853211 1333445688999999999987 58999999999999999865
No 114
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.5e-29 Score=271.70 Aligned_cols=280 Identities=15% Similarity=0.068 Sum_probs=218.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCC---cccccc-------------------------------------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG---AWQVDQ------------------------------------- 216 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~---~~~~~~------------------------------------- 216 (812)
.++.+++|+| +|++|+++. ++.|++||+.+++ ......
T Consensus 5 ~p~~~v~~s~-dg~~l~~~~-~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (450)
T 2vdu_B 5 HPLQNLLTSR-DGSLVFAII-KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGD 82 (450)
T ss_dssp CCCCEEEECS-SSSEEEEEE-TTEEEEEEEETTTEEEEEEEEECCC----------------------------------
T ss_pred ccEEEEEecC-CCCEEEEEe-CCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCc
Confidence 5688999999 999777765 6799999998876 211000
Q ss_pred -------------cccCCCCCCeeeeeEcCCCCcE-EEeeCCCceEEeeCC--CCCCCCCCCCCceEEc--CCCCcEEEE
Q psy4510 217 -------------KPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKK--RGKGPGIPTPPLFSFS--GHLTEGFAM 278 (812)
Q Consensus 217 -------------~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~--~~~~~~~~~~~~~~~~--~h~~~v~~l 278 (812)
....+|...|++++|+|++++| ++++.|+.|++|++. ++ .++..+. .|...|.++
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~-------~~~~~~~~~~~~~~v~~~ 155 (450)
T 2vdu_B 83 SIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSK-------NVLKLRKRFCFSKRPNAI 155 (450)
T ss_dssp -----------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSS-------SCEEEEEEEECSSCEEEE
T ss_pred cccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCC-------ceeeeeecccCCCCceEE
Confidence 1122566689999999999996 889999999999998 54 5666665 677899999
Q ss_pred EecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC---CCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 279 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG---EKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 279 ~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
+|+|++ .+|++|+.+|.|++|++.+..........+.+|...|++++|+|+ ++ +|++|+.|+.|++||+++ .
T Consensus 156 ~~sp~~-~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~-~l~s~~~d~~i~vwd~~~---~ 230 (450)
T 2vdu_B 156 SIAEDD-TTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQ-FIITSDRDEHIKISHYPQ---C 230 (450)
T ss_dssp EECTTS-SEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCE-EEEEEETTSCEEEEEESC---T
T ss_pred EEcCCC-CEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCc-EEEEEcCCCcEEEEECCC---C
Confidence 999999 899999999999999998876321123367889999999999999 76 799999999999999984 4
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-------------------------cC
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-------------------------HH 410 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-------------------------~h 410 (812)
.++..+..+|...|++++|+ ++++|++|+.|+.|++||++ .++.+..+. .+
T Consensus 231 ~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (450)
T 2vdu_B 231 FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWK---TGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDII 306 (450)
T ss_dssp TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETT---TCCEEEEEECHHHHGGGCCTTSBC----------CB
T ss_pred ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECC---CCcEeeeecchhhhhhhhhhcccccccccccccccc
Confidence 44555447899999999999 99999999999999999998 455666654 23
Q ss_pred CCCEEEEEEccCCCcEEEEEE-CCCCEEEEEc--CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGG-ADDQIALWDL--AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~ 487 (812)
...|.+++|+|++ .+|++++ .++.|++|++ ...... ........+..|.+++|+|+ .+++
T Consensus 307 ~~~v~~i~~~~~~-~~l~~~~~~d~~i~iw~~~~~~~~~l--------------~~~~~~~~~~~v~~~~~~~~--~~~v 369 (450)
T 2vdu_B 307 EFAVSKIIKSKNL-PFVAFFVEATKCIIILEMSEKQKGDL--------------ALKQIITFPYNVISLSAHND--EFQV 369 (450)
T ss_dssp CCCEEEEEECSSS-SEEEEEETTCSEEEEEEECSSSTTCE--------------EEEEEEECSSCEEEEEEETT--EEEE
T ss_pred eEEEEEEEEeCCC-CEEEEEECCCCeEEEEEeccCCCCce--------------eeccEeccCCceEEEEecCC--cEEE
Confidence 4679999999987 5788777 8999999999 332110 22223333478999999995 5666
Q ss_pred EEeC
Q psy4510 488 STAN 491 (812)
Q Consensus 488 ~~~~ 491 (812)
+.+.
T Consensus 370 ~~~~ 373 (450)
T 2vdu_B 370 TLDN 373 (450)
T ss_dssp EECC
T ss_pred EEec
Confidence 6544
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1.3e-28 Score=269.15 Aligned_cols=380 Identities=11% Similarity=0.061 Sum_probs=260.4
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeee---EcCCCCcEEEe---------
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQ---WSDLKTALQTV--------- 241 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~---~s~~~~~l~s~--------- 241 (812)
.....|..+.++|..+..+.........+++... ....+..++ |+|+++.++..
T Consensus 25 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~--------------~~~g~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 90 (433)
T 3bws_A 25 KNGTEIVKFSIHPYKGTVIRLGEEILPFKVLEMD--------------KNIALVEMAIPVYKDEKEIELKLSSPGFQNSS 90 (433)
T ss_dssp --CEEEEEEEEECCTTCEEEETTEECCEEEEEEE--------------TTEEEEEEEEECCCTTCCEEEEEECTTBCCEE
T ss_pred cCCcEEEEEecccccCceEEcCceecceeeeecc--------------cCCccEEEEEeeccCCCcEEEEEEccccCcce
Confidence 3445688888888433444443322223333211 223455666 66666655433
Q ss_pred -----eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccc
Q psy4510 242 -----DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPL 315 (812)
Q Consensus 242 -----~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~ 315 (812)
+.++.+++|.+.... ...+.+..+..+ ..+.+++|+|++ .++++++.++.|++||+.++...... ...+
T Consensus 91 ~~~~~~~~~~~~l~~~d~~~---~~~~~~~~~~~~-~~~~~~~~s~~~-~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~ 165 (433)
T 3bws_A 91 YRIRKPEELNEKLIALDKEG---ITHRFISRFKTG-FQPKSVRFIDNT-RLAIPLLEDEGMDVLDINSGQTVRLSPPEKY 165 (433)
T ss_dssp EEESSGGGGTTCEEECCBTT---CSEEEEEEEECS-SCBCCCEESSSS-EEEEEBTTSSSEEEEETTTCCEEEECCCHHH
T ss_pred eeecccCCCceEEEEECCCC---CcceEEEEEcCC-CCceEEEEeCCC-eEEEEeCCCCeEEEEECCCCeEeeecCcccc
Confidence 333434555543310 012344455544 445699999954 77888888999999999987632111 1145
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWD 394 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd 394 (812)
.+|...|.+++|+|++. ++++++.|+.|++||+++ ...+..+ ..|...+.+++|+|+++++ ++++.++.|++||
T Consensus 166 ~~~~~~v~~~~~~~~~~-~~~s~~~d~~v~~~d~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d 240 (433)
T 3bws_A 166 KKKLGFVETISIPEHNE-LWVSQMQANAVHVFDLKT---LAYKATV-DLTGKWSKILLYDPIRDLVYCSNWISEDISVID 240 (433)
T ss_dssp HTTCCEEEEEEEGGGTE-EEEEEGGGTEEEEEETTT---CCEEEEE-ECSSSSEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred cccCCceeEEEEcCCCE-EEEEECCCCEEEEEECCC---ceEEEEE-cCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEE
Confidence 68999999999999887 799999999999999984 3344555 5788899999999999966 5555899999999
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE--------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG--------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~--------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
++ .++.+..+..+ ..+.+++|+|++ .+|++++ .|+.|++||+...+. ..
T Consensus 241 ~~---~~~~~~~~~~~-~~~~~~~~~~~g-~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~-----------------~~- 297 (433)
T 3bws_A 241 RK---TKLEIRKTDKI-GLPRGLLLSKDG-KELYIAQFSASNQESGGGRLGIYSMDKEKL-----------------ID- 297 (433)
T ss_dssp TT---TTEEEEECCCC-SEEEEEEECTTS-SEEEEEEEESCTTCSCCEEEEEEETTTTEE-----------------EE-
T ss_pred CC---CCcEEEEecCC-CCceEEEEcCCC-CEEEEEECCCCccccCCCeEEEEECCCCcE-----------------Ee-
Confidence 98 45666666654 458999999997 4677766 478899999875410 00
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeec
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISM 546 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~ 546 (812)
T Consensus 298 -------------------------------------------------------------------------------- 297 (433)
T 3bws_A 298 -------------------------------------------------------------------------------- 297 (433)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccC
Q psy4510 547 SNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD 626 (812)
Q Consensus 547 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~ 626 (812)
...|...+.+++|+|+++.++++. +.++.|++||+.++.
T Consensus 298 ------------------------------------~~~~~~~~~~~~~~~~g~~l~~~~-~~~~~v~v~d~~~~~---- 336 (433)
T 3bws_A 298 ------------------------------------TIGPPGNKRHIVSGNTENKIYVSD-MCCSKIEVYDLKEKK---- 336 (433)
T ss_dssp ------------------------------------EEEEEECEEEEEECSSTTEEEEEE-TTTTEEEEEETTTTE----
T ss_pred ------------------------------------eccCCCCcceEEECCCCCEEEEEe-cCCCEEEEEECCCCc----
Confidence 001112455678888887665542 789999999998765
Q ss_pred CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEEEecCCCCEEEe
Q psy4510 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLAT 706 (812)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~las 706 (812)
++..+. +...+.+++|+| ++++|++++.+.. .....++++
T Consensus 337 ---------------------~~~~~~-~~~~~~~~~~s~-dg~~l~~~~~~~~-----------------~~~~~~~~~ 376 (433)
T 3bws_A 337 ---------------------VQKSIP-VFDKPNTIALSP-DGKYLYVSCRGPN-----------------HPTEGYLKK 376 (433)
T ss_dssp ---------------------EEEEEE-CSSSEEEEEECT-TSSEEEEEECCCC-----------------CTTTCTTSC
T ss_pred ---------------------EEEEec-CCCCCCeEEEcC-CCCEEEEEecCCC-----------------ccccccccc
Confidence 344443 667899999999 7777777665321 113457788
Q ss_pred ecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeec-cCCceEEeeecC
Q psy4510 707 GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-VDRSNRIGARRD 767 (812)
Q Consensus 707 gs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s-~Dg~i~iWd~~~ 767 (812)
|+.||.|++||+.+++ .+..+.+ ...+.+++|+|+|+ +|++++ .|++|++|++..
T Consensus 377 g~~dg~v~~~d~~~~~----~~~~~~~-~~~~~~~~~s~dg~-~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 377 GLVLGKVYVIDTTTDT----VKEFWEA-GNQPTGLDVSPDNR-YLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp CSSCCEEEEEETTTTE----EEEEEEC-SSSEEEEEECTTSC-EEEEEETTTTEEEEEEETT
T ss_pred cccceEEEEEECCCCc----EEEEecC-CCCCceEEEcCCCC-EEEEEECCCCeEEEEEecC
Confidence 8999999999998876 3444554 35799999999999 666665 599999999864
No 116
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.97 E-value=1e-28 Score=270.06 Aligned_cols=228 Identities=9% Similarity=0.051 Sum_probs=173.7
Q ss_pred ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce-----EEc
Q psy4510 195 GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF-----SFS 269 (812)
Q Consensus 195 ~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-----~~~ 269 (812)
++.++.++||.++...........+..+ ..+.+++|+|+++++++++.++.|++||+.++ +... .+.
T Consensus 95 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~-~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~ 166 (433)
T 3bws_A 95 KPEELNEKLIALDKEGITHRFISRFKTG-FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSG-------QTVRLSPPEKYK 166 (433)
T ss_dssp SGGGGTTCEEECCBTTCSEEEEEEEECS-SCBCCCEESSSSEEEEEBTTSSSEEEEETTTC-------CEEEECCCHHHH
T ss_pred ccCCCceEEEEECCCCCcceEEEEEcCC-CCceEEEEeCCCeEEEEeCCCCeEEEEECCCC-------eEeeecCccccc
Confidence 3444544555544321111123334333 45669999997778888888999999999875 3333 456
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEEC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT 349 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~ 349 (812)
+|.+.|.+++|+|++ .++++++.|+.|++||+.++. ....+..|...+.+++|+|+++.++++++.|+.|++||+
T Consensus 167 ~~~~~v~~~~~~~~~-~~~~s~~~d~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~ 241 (433)
T 3bws_A 167 KKLGFVETISIPEHN-ELWVSQMQANAVHVFDLKTLA----YKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDR 241 (433)
T ss_dssp TTCCEEEEEEEGGGT-EEEEEEGGGTEEEEEETTTCC----EEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred ccCCceeEEEEcCCC-EEEEEECCCCEEEEEECCCce----EEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEEC
Confidence 899999999999988 799999999999999998876 455666788999999999999976677778999999999
Q ss_pred CCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 350 RVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
+++ ..+..+ . +...+.+++|+|+++++++++ .||.|++||++. ++.+..+ .|...+.+++|+|
T Consensus 242 ~~~---~~~~~~-~-~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~---~~~~~~~-~~~~~~~~~~~~~ 312 (433)
T 3bws_A 242 KTK---LEIRKT-D-KIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDK---EKLIDTI-GPPGNKRHIVSGN 312 (433)
T ss_dssp TTT---EEEEEC-C-CCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTT---TEEEEEE-EEEECEEEEEECS
T ss_pred CCC---cEEEEe-c-CCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCC---CcEEeec-cCCCCcceEEECC
Confidence 843 334444 2 344599999999999888887 588999999973 4444443 4666899999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++..++++++.++.|++||+...
T Consensus 313 ~g~~l~~~~~~~~~v~v~d~~~~ 335 (433)
T 3bws_A 313 TENKIYVSDMCCSKIEVYDLKEK 335 (433)
T ss_dssp STTEEEEEETTTTEEEEEETTTT
T ss_pred CCCEEEEEecCCCEEEEEECCCC
Confidence 98667788899999999999865
No 117
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.2e-29 Score=295.83 Aligned_cols=265 Identities=21% Similarity=0.319 Sum_probs=210.8
Q ss_pred eEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC--CCeEEEEEECCCe
Q psy4510 266 FSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG--EKRVLASCSVDLS 343 (812)
Q Consensus 266 ~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~ 343 (812)
..+.+|.+.|.+++|+|++ .+|++|+.||.|+||++..+. ......+.+|.+.|++++|+|+ +. +|++|+.||.
T Consensus 3 ~~l~gH~~~V~~l~~s~dg-~~latg~~dg~I~vwd~~~~~--~~~~~~l~~h~~~V~~l~~s~~~~~~-~l~s~s~Dg~ 78 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYG-KRLATCSSDKTIKIFEVEGET--HKLIDTLTGHEGPVWRVDWAHPKFGT-ILASCSYDGK 78 (753)
T ss_dssp -----CCCCEEEECCCSSS-CCEEEEETTTEEEEEEEETTE--EEEEEEECCCSSCEEEEEECCTTSCS-EEEEEETTSC
T ss_pred eecccCcceeEEEEECCCC-CeEEEEECCCcEEEEecCCCC--CccceeccCCcCceEEEEecCCCCCC-EEEEEeCCCe
Confidence 4678999999999999998 799999999999999997542 1245678899999999999988 66 7999999999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCC--CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT--EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP 421 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~--~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p 421 (812)
|++||++++. ...+..+ ..|...|++++|+|+ ++++++|+.||.|++||++... ......+.+|...|.+++|+|
T Consensus 79 I~vwd~~~~~-~~~~~~~-~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~-~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 79 VLIWKEENGR-WSQIAVH-AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG-TTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp EEEEEEETTE-EEEEEEE-CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSS-CCCCEEEECCSSCEEEEEECC
T ss_pred EEEEECCCCc-ccccccc-cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCC-CcceeEeecCCCceEEEEecC
Confidence 9999998532 1234444 789999999999999 8999999999999999998632 234556788999999999999
Q ss_pred C------------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 422 T------------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 422 ~------------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
. ++.+|++|+.||.|++||++..... .
T Consensus 156 ~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~------------------------------------~----- 194 (753)
T 3jro_A 156 ATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQT------------------------------------Y----- 194 (753)
T ss_dssp CC---------CGGGCCEEEEETTSCEEEEEEETTTTE------------------------------------E-----
T ss_pred cccccccccccCCCCCEEEEEECCCeEEEEeccCCccc------------------------------------c-----
Confidence 5 2468999999999999998754210 0
Q ss_pred eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCC
Q psy4510 490 ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSG 569 (812)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 569 (812)
T Consensus 195 -------------------------------------------------------------------------------- 194 (753)
T 3jro_A 195 -------------------------------------------------------------------------------- 194 (753)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CccccCCCccceEEecccceEEEEEEecc---CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCC
Q psy4510 570 DEDRRKDPVMNSYFIRHRGCINRVRTCQY---GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPT 646 (812)
Q Consensus 570 ~~~~~~~~~~~~~~~~h~~~v~~l~~s~~---g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (812)
.....+.+|...|.+++|+|+ +++++++ +.||.|++||+.++... ..
T Consensus 195 --------~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~--s~Dg~I~iwd~~~~~~~--------------------~~ 244 (753)
T 3jro_A 195 --------VLESTLEGHSDWVRDVAWSPTVLLRSYLASV--SQDRTCIIWTQDNEQGP--------------------WK 244 (753)
T ss_dssp --------EEEEEECCCSSCEEEEEECCCCSSSEEEEEE--ESSSCEEEEEESSSSSC--------------------CB
T ss_pred --------eeeeeecCCCCcEEEEEeccCCCCCCEEEEE--ecCCEEEEecCCCCCCc--------------------ce
Confidence 001124456678999999999 8888888 89999999999886421 11
Q ss_pred CCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCC
Q psy4510 647 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 689 (812)
Q Consensus 647 ~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~ 689 (812)
..+....+|...|++++|+| ++.+|++++.||.|++|++.++
T Consensus 245 ~~~~~~~~~~~~v~~l~~sp-dg~~l~s~s~Dg~I~vwd~~~~ 286 (753)
T 3jro_A 245 KTLLKEEKFPDVLWRASWSL-SGNVLALSGGDNKVTLWKENLE 286 (753)
T ss_dssp CCBSSSSCCSSCCCCEEECT-TTCCEEEECSSSCEECCBCCSS
T ss_pred eEEeccCCCCCceEEEEEcC-CCCEEEEEcCCCEEEEEecCCC
Confidence 12334567889999999999 7889999999999999999863
No 118
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-28 Score=270.36 Aligned_cols=206 Identities=12% Similarity=0.074 Sum_probs=165.8
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE-----------------------------------
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS----------------------------------- 267 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----------------------------------- 267 (812)
..++.+++|+++|++|+++ .++.|++||+.++.. ...+..
T Consensus 4 ~~p~~~v~~s~dg~~l~~~-~~~~i~v~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAI-IKNCILSFKYQSPNH----WEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKS 78 (450)
T ss_dssp ECCCCEEEECSSSSEEEEE-ETTEEEEEEEETTTE----EEEEEEEECCC------------------------------
T ss_pred cccEEEEEecCCCCEEEEE-eCCeEEEEECCCCCc----ceeeeecCCccccccccccccchhhcccccccccccccccc
Confidence 3578999999999966555 578999999887630 001111
Q ss_pred -------------------EcCCCCcEEEEEecCCCCCE-EEEEeCCCcEEEEeCC--CCCcceecccccc--CCCCCEE
Q psy4510 268 -------------------FSGHLTEGFAMDWSSTEPGV-LATGDCKRNIHIWTPR--EAGAWQVDQKPLV--GHTNSVE 323 (812)
Q Consensus 268 -------------------~~~h~~~v~~l~~sp~~~~~-l~sg~~dg~i~vwd~~--~~~~~~~~~~~~~--~h~~~v~ 323 (812)
..+|.+.|.+++|+|++ .+ +++|+.||.|++|++. ++. ....+. .|...|.
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~-~~l~~~~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~~~v~ 153 (450)
T 2vdu_B 79 NKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDE-SRLIACADSDKSLLVFDVDKTSKN----VLKLRKRFCFSKRPN 153 (450)
T ss_dssp ---------------------CCCCCEEEEEECTTS-SEEEEEEGGGTEEEEEEECSSSSS----CEEEEEEEECSSCEE
T ss_pred CcCccccccCccccCCCCCCCccCCceEEEEEcCCC-CEEEEEECCCCeEEEEECcCCCCc----eeeeeecccCCCCce
Confidence 22456689999999999 56 5999999999999998 555 233343 5778999
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCccc-ceeecCCcCCCCeEEEEEcCC---CCEEEEEeCCCcEEEEecCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS-CMLTLPNAHTSDVNVISWNRT---EPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~-~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
+++|+|+++ +|++|+.+|.|++|++....... +...+ .+|...|++++|+|+ +++|++|+.|+.|++||++
T Consensus 154 ~~~~sp~~~-~l~~~~~~g~v~~~~~~~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~--- 228 (450)
T 2vdu_B 154 AISIAEDDT-TVIIADKFGDVYSIDINSIPEEKFTQEPI-LGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYP--- 228 (450)
T ss_dssp EEEECTTSS-EEEEEETTSEEEEEETTSCCCSSCCCCCS-EECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEES---
T ss_pred EEEEcCCCC-EEEEEeCCCcEEEEecCCcccccccceee-ecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECC---
Confidence 999999998 69999999999999998654433 33344 689999999999999 8899999999999999998
Q ss_pred CCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 400 KGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 400 ~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+..+.. +.+|...|++++|+ ++ .+|++++.|+.|++||+.+.+
T Consensus 229 ~~~~~~~~~~~h~~~v~~~~~s-d~-~~l~s~~~d~~v~vwd~~~~~ 273 (450)
T 2vdu_B 229 QCFIVDKWLFGHKHFVSSICCG-KD-YLLLSAGGDDKIFAWDWKTGK 273 (450)
T ss_dssp CTTCEEEECCCCSSCEEEEEEC-ST-TEEEEEESSSEEEEEETTTCC
T ss_pred CCceeeeeecCCCCceEEEEEC-CC-CEEEEEeCCCeEEEEECCCCc
Confidence 4556666 66899999999999 65 799999999999999998773
No 119
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.97 E-value=1.4e-27 Score=289.54 Aligned_cols=425 Identities=12% Similarity=0.035 Sum_probs=302.8
Q ss_pred CCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC------C
Q psy4510 222 HTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------R 295 (812)
Q Consensus 222 h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g 295 (812)
+...+.+.+||+ ++|+.++. +.|.+|++.++ ....+.+|...+.+++|||+| .+||+++.+ .
T Consensus 13 ~~~~~~~~~~S~--~~iaf~~~-~~l~~~~~~gg--------~~~~lt~~~~~v~~~~~SPDG-~~la~~s~~~~~~~~~ 80 (1045)
T 1k32_A 13 MPNLLLNPDIHG--DRIIFVCC-DDLWEHDLKSG--------STRKIVSNLGVINNARFFPDG-RKIAIRVMRGSSLNTA 80 (1045)
T ss_dssp CCCCCEEEEEET--TEEEEEET-TEEEEEETTTC--------CEEEEECSSSEEEEEEECTTS-SEEEEEEEESTTCCEE
T ss_pred ccceEeCcEEeC--CEEEEEEC-CcEEEEECCCC--------cEEEeeeCCCcccCeEECCCC-CEEEEEEeeccCCCCC
Confidence 456788999995 57777765 68999999774 356788899999999999999 677776543 4
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCE-------EEEEEcCCCCeEEEEEECC------CeEEEEECCCCCcccceeecC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSV-------EDLQWSPGEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v-------~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~ 362 (812)
.|++|++.++. ...+..|...+ ..++|+|+|+ ++++++.+ ..|.+|++..+. ...+.
T Consensus 81 ~i~~~d~~~g~-----~~~lt~~~~~~~~~~~~~~~~~~SpDg~-ll~~~~~~~~~~~~~~l~~~~~~~g~----~~~l~ 150 (1045)
T 1k32_A 81 DLYFYNGENGE-----IKRITYFSGKSTGRRMFTDVAGFDPDGN-LIISTDAMQPFSSMTCLYRVENDGIN----FVPLN 150 (1045)
T ss_dssp EEEEEETTTTE-----EEECCCCCEEEETTEECSEEEEECTTCC-EEEEECTTSSSTTCCEEEEEEGGGTE----EEECC
T ss_pred eEEEEECCCCC-----eEEcccCCCcccccccccccccCCCCCE-EEEEECCcCCCcccceEEEEECCCCC----eEEec
Confidence 79999988764 45677888888 9999999998 78888755 357777875321 22331
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeC------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGD------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
. + ....++|+| | ++++++. +...++|.... . .....+.+|...+.++.|+++ .+++++
T Consensus 151 ~-~--~~~~~~~sp-G-~l~~~~~~~~~~~~~~~~g~~~~~lw~~~~--~-~~~~~l~~~~~~v~~~~~s~d--~l~~~~ 220 (1045)
T 1k32_A 151 L-G--PATHILFAD-G-RRVIGRNTFELPHWKGYRGGTRGKIWIEVN--S-GAFKKIVDMSTHVSSPVIVGH--RIYFIT 220 (1045)
T ss_dssp S-C--SCSEEEEET-T-EEEEEESCSCCTTSTTCCSTTCCEEEEEEE--T-TEEEEEECCSSCCEEEEEETT--EEEEEE
T ss_pred C-C--CcceeeeCC-C-EEEEeccCCCccccccccCCCcCCEEEECC--C-CCeEECcCCCCcccceEEeCC--EEEEEE
Confidence 2 2 234677999 8 8888753 34567776442 2 445566889999999999986 577888
Q ss_pred ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe
Q psy4510 431 GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI 510 (812)
Q Consensus 431 ~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 510 (812)
+.++.+.+|.+..... .... ...+..+..++|+|++..++.+ ....+.+|.. .. ..+. .
T Consensus 221 ~~dg~~~l~~~~~~g~---------------~~~~-l~~~~~~~~~~~SpDG~~la~~-~~~~i~~~d~-~~--~~l~-~ 279 (1045)
T 1k32_A 221 DIDGFGQIYSTDLDGK---------------DLRK-HTSFTDYYPRHLNTDGRRILFS-KGGSIYIFNP-DT--EKIE-K 279 (1045)
T ss_dssp CTTSSCEEEEEETTSC---------------SCEE-CCCCCSSCEEEEEESSSCEEEE-ETTEEEEECT-TT--CCEE-E
T ss_pred eccCceEEEEEeCCCC---------------cceE-ecCCCCcceeeEcCCCCEEEEE-eCCEEEEecC-Cc--eEee-e
Confidence 8899999998764321 1111 1122346677999998655554 4545555543 21 1221 1
Q ss_pred ecC------------CCCeeEEEEc-CCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCC
Q psy4510 511 HLG------------QKEIKELHWH-PQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDP 577 (812)
Q Consensus 511 ~~~------------~~~i~~~~~~-p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 577 (812)
... ...+..++|+ |++..++.+. .+ .+..+... .+
T Consensus 280 l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--~~--~i~~~~~~---~~------------------------- 327 (1045)
T 1k32_A 280 IEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--RG--QAFIQDVS---GT------------------------- 327 (1045)
T ss_dssp CCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--TT--EEEEECTT---SS-------------------------
T ss_pred eccCcccccccccccccccceeeecCCCCCEEEEEE--cC--EEEEEcCC---CC-------------------------
Confidence 111 2268899999 9954333333 21 12222211 10
Q ss_pred ccceEEecccc-eEEEEEEeccCCeEEEEeecCcceEE-EEeccccccccCCcccccccccccCCCCCCCCCCeeeecCC
Q psy4510 578 VMNSYFIRHRG-CINRVRTCQYGSTTLAGVWGEVGKVG-IWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGH 655 (812)
Q Consensus 578 ~~~~~~~~h~~-~v~~l~~s~~g~~l~~~~~~~dg~I~-iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh 655 (812)
....+..|.. .+..++|+ +|+.++.+ +.++.+. +|++.++. ...+.+|
T Consensus 328 -~~~~~~~~~~~~~~~~~~s-dg~~l~~~--s~~~~l~~~~d~~~~~--------------------------~~~l~~~ 377 (1045)
T 1k32_A 328 -YVLKVPEPLRIRYVRRGGD-TKVAFIHG--TREGDFLGIYDYRTGK--------------------------AEKFEEN 377 (1045)
T ss_dssp -BEEECSCCSCEEEEEECSS-SEEEEEEE--ETTEEEEEEEETTTCC--------------------------EEECCCC
T ss_pred -ceEEccCCCcceEEeeeEc-CCCeEEEE--ECCCceEEEEECCCCC--------------------------ceEecCC
Confidence 0122345556 78999999 99999988 5688888 99987764 2334478
Q ss_pred CCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEE----------EEecCCCCEEEeecCCC----------eEEE
Q psy4510 656 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSV----------YLYTNRFGVLATGDCKR----------NIHI 715 (812)
Q Consensus 656 ~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~----------~~~s~dg~~lasgs~dg----------~i~i 715 (812)
...+.+++||| ++++|++++.++.|++||+.+++...+ .+|||||++||+++.++ .|++
T Consensus 378 ~~~~~~~~~Sp-DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l 456 (1045)
T 1k32_A 378 LGNVFAMGVDR-NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHV 456 (1045)
T ss_dssp CCSEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEE
T ss_pred ccceeeeEECC-CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEE
Confidence 88999999999 899999999999999999998766443 46899999999887654 9999
Q ss_pred eecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 716 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 716 wd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
||+.+++ ...+.+|...+.+++|+|||+ +|++++.++..++|+....
T Consensus 457 ~d~~~g~-----~~~l~~~~~~~~~~~~spdG~-~l~~~s~~~~~~~~~~~~~ 503 (1045)
T 1k32_A 457 YDMEGRK-----IFAATTENSHDYAPAFDADSK-NLYYLSYRSLDPSPDRVVL 503 (1045)
T ss_dssp EETTTTE-----EEECSCSSSBEEEEEECTTSC-EEEEEESCCCCCEECSSSS
T ss_pred EECCCCc-----EEEeeCCCcccCCceEcCCCC-EEEEEecccCCcCcchhcc
Confidence 9998764 456778888899999999999 7999999999999986543
No 120
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.3e-28 Score=259.74 Aligned_cols=241 Identities=9% Similarity=0.009 Sum_probs=182.0
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC--CCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG--PGI 260 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~--~~~ 260 (812)
.+.+ ++.+||||+.||.|+|||+.+++.. ..+. ...|.+++|+|. +++++.|+.|++|+...... ...
T Consensus 43 ~~~~-d~~~l~sg~~Dg~v~iwd~~~~~~~----~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~ 112 (343)
T 3lrv_A 43 SMYY-DKWVCMCRCEDGALHFTQLKDSKTI----TTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK 112 (343)
T ss_dssp SSSE-EEEEEEEEEETTEEEEEEESSSSCE----EEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT
T ss_pred hhcC-CCCEEEEECCCCcEEEEECCCCcEE----EEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC
Confidence 3445 8899999999999999999987632 2232 567889999988 99999999999997763100 000
Q ss_pred CCCCceEEc-CCCCcEEEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEE
Q psy4510 261 PTPPLFSFS-GHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 261 ~~~~~~~~~-~h~~~v~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~ 336 (812)
....+..+. +|.+.|.+++|+| ++ .+|++|+.||+|++||+.++.. .... ..|...|.+++|+|++. +|+
T Consensus 113 ~~~~~~~~~~~~~~~v~~~~~~~~~~~-~~l~s~s~dg~i~~wd~~~~~~----~~~~~~~~~~~i~~~~~~pdg~-~la 186 (343)
T 3lrv_A 113 TNKVLREIEVDSANEIIYMYGHNEVNT-EYFIWADNRGTIGFQSYEDDSQ----YIVHSAKSDVEYSSGVLHKDSL-LLA 186 (343)
T ss_dssp TCCEEEEEECCCSSCEEEEECCC---C-CEEEEEETTCCEEEEESSSSCE----EEEECCCSSCCCCEEEECTTSC-EEE
T ss_pred CcceeEEeecCCCCCEEEEEcCCCCCC-CEEEEEeCCCcEEEEECCCCcE----EEEEecCCCCceEEEEECCCCC-EEE
Confidence 112233333 6778999999999 88 8999999999999999998763 2222 34566899999999998 799
Q ss_pred EEECCCeEEEEECCCCCcccce-eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCM-LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
+|+.||.|++||++++. .+ ..+...|...|++++|+|++.+|++|+ ++.|++||++..+....+..+..|...+.
T Consensus 187 sg~~dg~i~iwd~~~~~---~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~~~ 262 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSPD---QASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFKTG 262 (343)
T ss_dssp EECTTSCEEEEESSCTT---SCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC-----C
T ss_pred EEcCCCEEEEEECCCCC---CCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceeeccccccccccc
Confidence 99999999999999543 33 445334999999999999999999999 55999999996332222333333444444
Q ss_pred --EEEEccCCCcEEEEEEC-CCCEEEEEcCCC
Q psy4510 416 --TVEWHPTESSTFASGGA-DDQIALWDLAVE 444 (812)
Q Consensus 416 --~v~~~p~~~~~l~s~~~-dg~v~iwd~~~~ 444 (812)
+++|+|++ .+|++++. |+.|++|++...
T Consensus 263 ~~~~~~~~~g-~~l~~~s~~d~~i~v~~~~~~ 293 (343)
T 3lrv_A 263 TVTYDIDDSG-KNMIAYSNESNSLTIYKFDKK 293 (343)
T ss_dssp CEEEEECTTS-SEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEECCCC-CEEEEecCCCCcEEEEEEccc
Confidence 69999997 68999888 999999999765
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=1.8e-28 Score=259.55 Aligned_cols=290 Identities=13% Similarity=0.115 Sum_probs=209.2
Q ss_pred CCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC
Q psy4510 263 PPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL 342 (812)
Q Consensus 263 ~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg 342 (812)
.++..+.+|...|.+++|+|++ .+|++|+.++ +++|++..... ... .+...+..+++.++++.++++++.|+
T Consensus 10 ~~~~~~~~h~~~V~~v~fs~dg-~~la~g~~~~-~~iw~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~~d~ 81 (355)
T 3vu4_A 10 NPIVPENHVSNPVTDYEFNQDQ-SCLILSTLKS-FEIYNVHPVAH----IMS--QEMRHLSKVRMLHRTNYVAFVTGVKE 81 (355)
T ss_dssp ---------CCCCCEEEECTTS-SEEEEECSSE-EEEEEETTEEE----EEE--EECSCCCEEEECTTSSEEEEECSSTT
T ss_pred CCccccccCCCceEEEEECCCC-CEEEEEcCCE-EEEEecCCcce----eee--eecCCeEEEEEcCCCCEEEEEECCcc
Confidence 6677788999999999999999 7999988765 78999876541 111 12235788899998886667788899
Q ss_pred eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccC
Q psy4510 343 SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPT 422 (812)
Q Consensus 343 ~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~ 422 (812)
+|++||+++ ..++..+ .+...|.+++|+++. ++++ .++.|++||++.. .+.+..+.. +...+++++
T Consensus 82 ~v~iWd~~~---~~~~~~~--~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~--~~~~~~~~~---~~~~~~~s~- 147 (355)
T 3vu4_A 82 VVHIWDDVK---KQDVSRI--KVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNP--WKRITDDIR---FGGVCEFSN- 147 (355)
T ss_dssp EEEEEETTT---TEEEEEE--ECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTT--CCBSSCCEE---EEEEEEEET-
T ss_pred EEEEEECCC---CcEEEEE--ECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCC--ceeeEEecc---CCceEEEEc-
Confidence 999999984 4445555 366799999999764 4444 3789999999852 144444443 445566776
Q ss_pred CCcEEEE--EECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 423 ESSTFAS--GGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 423 ~~~~l~s--~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
.+++. |+.||.|++||+....... .. ..
T Consensus 148 --~~la~~sg~~~g~v~iwd~~~~~~~~------------------~~-----------~~------------------- 177 (355)
T 3vu4_A 148 --GLLVYSNEFNLGQIHITKLQSSGSAT------------------TQ-----------DQ------------------- 177 (355)
T ss_dssp --TEEEEEESSCTTCEEEEECCC---------------------------------------------------------
T ss_pred --cEEEEeCCCcCcEEEEEECCCCCccc------------------cc-----------cc-------------------
Confidence 35555 5789999999998763100 00 00
Q ss_pred CCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCcc-
Q psy4510 501 SDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVM- 579 (812)
Q Consensus 501 ~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 579 (812)
..... ....
T Consensus 178 ---------------~~~~~-------------------------------------------------------~~~p~ 187 (355)
T 3vu4_A 178 ---------------GVQQK-------------------------------------------------------AILGK 187 (355)
T ss_dssp -------------------------------------------------------------------------------C
T ss_pred ---------------ccccc-------------------------------------------------------ccCcc
Confidence 00000 0001
Q ss_pred ceEEecccceEEEEEEeccCCeEEEEeecCcce-EEEEeccccccccCCcccccccccccCCCCCCCCCCeeeec-C-CC
Q psy4510 580 NSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGK-VGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS-G-HL 656 (812)
Q Consensus 580 ~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~-I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g-h~ 656 (812)
...+.+|.+.|++++|+|+|++|+++ +.||+ |++||+.++. ++..+. + |.
T Consensus 188 ~~~~~~h~~~v~~~~~s~~g~~l~s~--s~d~~~v~iwd~~~~~-------------------------~~~~~~~g~h~ 240 (355)
T 3vu4_A 188 GVLIKAHTNPIKMVRLNRKSDMVATC--SQDGTIIRVFKTEDGV-------------------------LVREFRRGLDR 240 (355)
T ss_dssp CEEECCCSSCEEEEEECTTSSEEEEE--ETTCSEEEEEETTTCC-------------------------EEEEEECTTCC
T ss_pred cEEEEccCCceEEEEECCCCCEEEEE--eCCCCEEEEEECCCCc-------------------------EEEEEEcCCCC
Confidence 34567889999999999999999999 89998 9999999876 677787 6 99
Q ss_pred CceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------------------------eEEEEecCCCCE
Q psy4510 657 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------------------------------WSVYLYTNRFGV 703 (812)
Q Consensus 657 ~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------------------------------~~~~~~s~dg~~ 703 (812)
..|++++|+| ++.+|++++.|++|++||+..+.. ...+++++|+++
T Consensus 241 ~~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~ 319 (355)
T 3vu4_A 241 ADVVDMKWST-DGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSL 319 (355)
T ss_dssp SCEEEEEECT-TSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEE
T ss_pred CcEEEEEECC-CCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCE
Confidence 9999999999 889999999999999999976320 155789999999
Q ss_pred EEeecCCCeEEEeecCCCC
Q psy4510 704 LATGDCKRNIHIWTPREAG 722 (812)
Q Consensus 704 lasgs~dg~i~iwd~~~~~ 722 (812)
|++++.||.+++|++..++
T Consensus 320 l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 320 VVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp EEEETTTTEEEEEEEEEET
T ss_pred EEEEeCCCeEEEEEEEcCC
Confidence 9999999999999987654
No 122
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=4.1e-27 Score=253.52 Aligned_cols=326 Identities=8% Similarity=0.029 Sum_probs=240.3
Q ss_pred CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc
Q psy4510 236 TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 236 ~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~ 315 (812)
..+++++.++.|++||+.++ +.+..+.+|. .+.+++|+|++..++++++.++.|++||+.+++ ....+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~-------~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~----~~~~~ 70 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSN-------KVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNN----VIATV 70 (391)
T ss_dssp EEEEEETTTTEEEEEETTTT-------EEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTE----EEEEE
T ss_pred EEEEEcCCCCEEEEEECCCC-------eEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCe----EEEEE
Confidence 35778889999999999875 6677777765 489999999994445788899999999998876 34444
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWD 394 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd 394 (812)
..+. .+.+++|+|+++.++++++.++.|++||+.++ ..+..+ .+...+.+++|+|+++.| ++++.++.|++||
T Consensus 71 ~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~---~~~~~~--~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d 144 (391)
T 1l0q_A 71 PAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSN---TVAGTV--KTGKSPLGLALSPDGKKLYVTNNGDKTVSVIN 144 (391)
T ss_dssp ECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTT---EEEEEE--ECSSSEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred ECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCC---eEEEEE--eCCCCcceEEECCCCCEEEEEeCCCCEEEEEE
Confidence 4343 89999999999976677778899999999853 334443 234578999999999966 7888899999999
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
++ .++.+..+..| ..+.+++|+|++..++++++.++.|++||+...+. ..
T Consensus 145 ~~---~~~~~~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~-----------------~~--------- 194 (391)
T 1l0q_A 145 TV---TKAVINTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV-----------------ID--------- 194 (391)
T ss_dssp TT---TTEEEEEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE-----------------EE---------
T ss_pred CC---CCcEEEEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE-----------------EE---------
Confidence 97 45666666655 45799999999865557888899999999876510 00
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
T Consensus 195 -------------------------------------------------------------------------------- 194 (391)
T 1l0q_A 195 -------------------------------------------------------------------------------- 194 (391)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeec-CcceEEEEeccccccccCCcccccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWG-EVGKVGIWDLKTALQTVDDPFQLAE 633 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~-~dg~I~iwd~~~~~~~~~~~~~~~~ 633 (812)
...+...+.+++|+|+++++++++.. .++.|++||+.++.
T Consensus 195 ----------------------------~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~----------- 235 (391)
T 1l0q_A 195 ----------------------------TVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNK----------- 235 (391)
T ss_dssp ----------------------------EEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTE-----------
T ss_pred ----------------------------EEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCe-----------
Confidence 00011256678899999988887311 68999999998875
Q ss_pred cccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-EecCCCceEEEEecCCCceeEEEE----------------
Q psy4510 634 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL-ATGDCKRNIHIWTPREAGAWSVYL---------------- 696 (812)
Q Consensus 634 ~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l-as~s~Dg~v~iWd~~~~~~~~~~~---------------- 696 (812)
++..+..|. .+.+++|+| +++.| ++++.|+.|++||+.+++......
T Consensus 236 --------------~~~~~~~~~-~~~~~~~s~-dg~~l~~s~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (391)
T 1l0q_A 236 --------------ITARIPVGP-DPAGIAVTP-DGKKVYVALSFXNTVSVIDTATNTITATMAVGKNPYASGQFIGSIP 299 (391)
T ss_dssp --------------EEEEEECCS-SEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEECSSSEECCSSCEEECS
T ss_pred --------------EEEEEecCC-CccEEEEcc-CCCEEEEEcCCCCEEEEEECCCCcEEEEEECCcCCCccceeeeccc
Confidence 456666655 578999999 66655 788999999999999866543321
Q ss_pred ---------ecCCC----------CEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeec
Q psy4510 697 ---------YTNRF----------GVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 755 (812)
Q Consensus 697 ---------~s~dg----------~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s 755 (812)
|+.+. ..+...+.+..+++|++.++.. ..+..+ ...|+++|. |.++..
T Consensus 300 ~~~~~~~a~fs~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~g~~--------~~~~~~--~~~~~~~g~-y~~~~~ 366 (391)
T 1l0q_A 300 VQPVYPSADFKSNITSGYIFLSEPVQFTDLSKDATEWKWDFGDGSS--------SKKQNP--THTYSETGI-YTVRLT 366 (391)
T ss_dssp SCCCCCBCCEEESCCSSEEETTCCEEEEECCBSCSEEEEECSSSCE--------ECSSSC--EECCSSCEE-EEEEEE
T ss_pred ccccccccccccccccccccccceEEEEeCCCCceEEEEECCCCcc--------cCcCCC--eEEeCCCce-EEEEEE
Confidence 22111 2355667788999999987752 112222 368999998 676543
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.96 E-value=5.5e-28 Score=242.30 Aligned_cols=279 Identities=13% Similarity=0.058 Sum_probs=193.8
Q ss_pred CEEEEEEcCCC-CeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 321 SVEDLQWSPGE-KRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 321 ~v~~~~~~p~~-~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
.+.++.|-..+ +...+.......|++|+.....+-..+.+. ..|..+|..+.+.|+..-|++.. +
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~---------~---- 106 (356)
T 2w18_A 41 DVSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTW-HFAEVPVLQIVPVPDVYNLVCVA---------L---- 106 (356)
T ss_dssp EEEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEE-ECCSSCEEEECCCTTCCSCEEEE---------E----
T ss_pred EEeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEE-eccCceeEEEEEcCcccceeeee---------e----
Confidence 35566664433 333333444589999999976555677777 88999999999999875222211 1
Q ss_pred CCCceEEcccCCCCEEEEEEccC----CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPT----ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~----~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
-.-+...|.+++++|+ + +++++++.+ +++|++..+ +
T Consensus 107 -------~~~~~~~v~sla~spd~~~~~-~~l~s~g~~--~~v~~l~~g-----------------~------------- 146 (356)
T 2w18_A 107 -------GNLEIREIRALFCSSDDESEK-QVLLKSGNI--KAVLGLTKR-----------------R------------- 146 (356)
T ss_dssp -------CSSSEEEEEEECC------CC-EEEEEEEEE--EEEEEETTT-----------------E-------------
T ss_pred -------ccccccceEEEEECCCccccc-cEEEeCCCe--EEEEecCCC-----------------c-------------
Confidence 0113456889999998 6 588887744 888987543 1
Q ss_pred EEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 476 LHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
++.++..+ +...|..++++|+ +..+
T Consensus 147 ---------lv~ss~~g--------------------~d~~V~~~~~s~d--G~~~------------------------ 171 (356)
T 2w18_A 147 ---------LVSSSGTL--------------------SDQQVEVMTFAED--GGGK------------------------ 171 (356)
T ss_dssp ---------EEEEESSS--------------------TTCEEEEEEECTT--SCEE------------------------
T ss_pred ---------EEEecccC--------------------CCCcEEEEEECCC--Ccee------------------------
Confidence 22221110 1234444555555 2221
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEec---cCCeEEEEeecCcceEEEEeccccccccCCccccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ---YGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~---~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
.....|...++.++|++ ++..|+++ +.|++|+|||+.+++
T Consensus 172 -------------------------~s~~~~~~~v~~l~fs~~~g~~~~LaSg--S~D~TIkIWDl~TGk---------- 214 (356)
T 2w18_A 172 -------------------------ENQFLMPPEETILTFAEVQGMQEALLGT--TIMNNIVIWNLKTGQ---------- 214 (356)
T ss_dssp -------------------------EEEEECCCSSCEEEEEEEETSTTEEEEE--ETTSEEEEEETTTCC----------
T ss_pred -------------------------eeeccCCCceeeEEeeccCCCCceEEEe--cCCCcEEEEECCCCc----------
Confidence 23446667788889999 67889988 899999999999987
Q ss_pred ccccccCCCCCCCCCCeeeecCCCC---ceEEEEeCCCCCCeE------------EecCCCceEEEEecCCCceeEEEEe
Q psy4510 633 EHNKKRGKGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVL------------ATGDCKRNIHIWTPREAGAWSVYLY 697 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~~~gh~~---~V~~l~~sp~~~~~l------------as~s~Dg~v~iWd~~~~~~~~~~~~ 697 (812)
+++++.+|.. .+.+++|+| ++.++ ++|+.|++|++||+.+++.+.+..+
T Consensus 215 ---------------~l~tL~g~~~~v~~v~~vafSp-dG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 215 ---------------LLKKMHIDDSYQASVCHKAYSE-MGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp ---------------EEEEEECCC---CCCEEEEEEE-TTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ---------------EEEEEcCCCcceeeeEEEEECC-CCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 7788887653 677889999 77765 6788999999999999988776543
Q ss_pred c-CCCC------------EEEeecCCCeEEEeecCCCCCcccccccccCCCccee-EeEEecCCceeEEeeccCCceEEe
Q psy4510 698 T-NRFG------------VLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE-DLQWSPGEKRVLASCSVDRSNRIG 763 (812)
Q Consensus 698 s-~dg~------------~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~-~l~fs~dg~~~L~s~s~Dg~i~iW 763 (812)
+ |+|. ++|+|+.|++|+|||+.+++ ++.++.+|...+. +++|||||+ +|+||+.|++||||
T Consensus 279 ~~p~Gh~~~~lsg~~sg~~lASgS~DgTIkIWDl~tGk----~l~tL~gH~~~vvs~vafSPDG~-~LaSGS~D~TIklW 353 (356)
T 2w18_A 279 CLPPGQAGRFLEGDVKDHCAAAILTSGTIAIWDLLLGQ----CTALLPPVSDQHWSFVKWSGTDS-HLLAGQKDGNIFVY 353 (356)
T ss_dssp CCCTTCCCCEEEEEEETTEEEEEETTSCEEEEETTTCS----EEEEECCC--CCCCEEEECSSSS-EEEEECTTSCEEEE
T ss_pred eccCCCcceeEccccCCCEEEEEcCCCcEEEEECCCCc----EEEEecCCCCCeEEEEEECCCCC-EEEEEECCCcEEEe
Confidence 3 5554 68999999999999999998 5778999988665 589999999 89999999999999
Q ss_pred eec
Q psy4510 764 ARR 766 (812)
Q Consensus 764 d~~ 766 (812)
|+.
T Consensus 354 d~~ 356 (356)
T 2w18_A 354 HYS 356 (356)
T ss_dssp EEC
T ss_pred cCC
Confidence 963
No 124
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=7.7e-28 Score=254.68 Aligned_cols=297 Identities=10% Similarity=0.082 Sum_probs=205.8
Q ss_pred ccCcCCCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCCCce
Q psy4510 169 LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQL 247 (812)
Q Consensus 169 i~~~~gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i 247 (812)
+....+|.+.|++++|+| +|++||+|+.+| ++||++.+... . ...+...+..+++.+.++.+ ++++.++.|
T Consensus 12 ~~~~~~h~~~V~~v~fs~-dg~~la~g~~~~-~~iw~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~~~~~d~~v 83 (355)
T 3vu4_A 12 IVPENHVSNPVTDYEFNQ-DQSCLILSTLKS-FEIYNVHPVAH----I--MSQEMRHLSKVRMLHRTNYVAFVTGVKEVV 83 (355)
T ss_dssp -------CCCCCEEEECT-TSSEEEEECSSE-EEEEEETTEEE----E--EEEECSCCCEEEECTTSSEEEEECSSTTEE
T ss_pred ccccccCCCceEEEEECC-CCCEEEEEcCCE-EEEEecCCcce----e--eeeecCCeEEEEEcCCCCEEEEEECCccEE
Confidence 334458999999999999 999999999775 78999876542 1 11222358889999998888 467788999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC-CcceeccccccCCCCCEEEEE
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA-GAWQVDQKPLVGHTNSVEDLQ 326 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~-~~~~~~~~~~~~h~~~v~~~~ 326 (812)
++||..++ +++..+. |...|.+++|+++ .++++. ++.|++||+.+. . ....+.. ....++
T Consensus 84 ~iWd~~~~-------~~~~~~~-~~~~v~~v~~~~~---~~~~~~-~~~i~i~d~~~~~~----~~~~~~~---~~~~~~ 144 (355)
T 3vu4_A 84 HIWDDVKK-------QDVSRIK-VDAPVKDLFLSRE---FIVVSY-GDVISVFKFGNPWK----RITDDIR---FGGVCE 144 (355)
T ss_dssp EEEETTTT-------EEEEEEE-CSSCEEEEEECSS---EEEEEE-TTEEEEEESSTTCC----BSSCCEE---EEEEEE
T ss_pred EEEECCCC-------cEEEEEE-CCCceEEEEEcCC---EEEEEE-cCEEEEEECCCCce----eeEEecc---CCceEE
Confidence 99999885 6666666 6679999999986 344443 789999999987 4 2333333 455666
Q ss_pred EcCCCCeEEEE--EECCCeEEEEECCCCCcc------------cc-eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCc-E
Q psy4510 327 WSPGEKRVLAS--CSVDLSIRIWDTRVINTK------------SC-MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGC-I 390 (812)
Q Consensus 327 ~~p~~~~~l~s--~~~dg~i~iwd~~~~~~~------------~~-~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~-i 390 (812)
+++ . +++. |+.||.|++||++..... .+ +..+ .+|...|++++|+|++++|++|+.||+ |
T Consensus 145 ~s~--~-~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~-~~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 145 FSN--G-LLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLI-KAHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EET--T-EEEEEESSCTTCEEEEECCC------------------CCEEE-CCCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEc--c-EEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEE-EccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 777 4 4555 588999999999853200 01 4445 789999999999999999999999998 9
Q ss_pred EEEecCCCCCCCceEEcc-c-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhh-c-----cCCCc
Q psy4510 391 HVWDLRRFKKGSSVATFK-H-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAEL-K-----DLPSQ 462 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~-~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~-~-----~~~~~ 462 (812)
++||++ .++.+..+. + |...|++++|+|++ .+|++++.|++|++||+............... . .....
T Consensus 221 ~iwd~~---~~~~~~~~~~g~h~~~v~~~~~s~~~-~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (355)
T 3vu4_A 221 RVFKTE---DGVLVREFRRGLDRADVVDMKWSTDG-SKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLC 296 (355)
T ss_dssp EEEETT---TCCEEEEEECTTCCSCEEEEEECTTS-CEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSE
T ss_pred EEEECC---CCcEEEEEEcCCCCCcEEEEEECCCC-CEEEEEECCCEEEEEEccCCCCcccccccceeecccccccccee
Confidence 999998 577888887 5 99999999999987 69999999999999999865321100000000 0 00000
Q ss_pred e-EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeC
Q psy4510 463 L-LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 500 (812)
Q Consensus 463 ~-~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~ 500 (812)
. .+..........++|++++..+++.+.++.+.+|...
T Consensus 297 ~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~ 335 (355)
T 3vu4_A 297 NFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVV 335 (355)
T ss_dssp EEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEE
T ss_pred EEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEE
Confidence 0 0111112234778999997655555444445666443
No 125
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.96 E-value=2.5e-27 Score=255.22 Aligned_cols=228 Identities=12% Similarity=0.049 Sum_probs=178.7
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE-EEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
+.++++++.|+.|++||+.+++ ....+..|. .+.+++|+|++++| ++++.++.|++||+.++ +.+..
T Consensus 2 ~~l~vs~~~d~~v~v~d~~~~~----~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~-------~~~~~ 69 (391)
T 1l0q_A 2 TFAYIANSESDNISVIDVTSNK----VTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATN-------NVIAT 69 (391)
T ss_dssp EEEEEEETTTTEEEEEETTTTE----EEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTT-------EEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCe----EEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCC-------eEEEE
Confidence 3578899999999999998876 445555564 58999999999987 66778999999999875 56666
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+..+. .+.+++|+|++..++++++.++.|++||+.++. ....+. +...+.+++|+|+++.++++++.++.|++|
T Consensus 70 ~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~----~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~ 143 (391)
T 1l0q_A 70 VPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNT----VAGTVK-TGKSPLGLALSPDGKKLYVTNNGDKTVSVI 143 (391)
T ss_dssp EECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTE----EEEEEE-CSSSEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred EECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCe----EEEEEe-CCCCcceEEECCCCCEEEEEeCCCCEEEEE
Confidence 66555 899999999994445666678999999999876 333333 345789999999999766888899999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
|++++ ..+..+ .. ...+.+++|+|+++++ ++++.++.|++||++. ++.+..+. +...+.+++|+|++. +
T Consensus 144 d~~~~---~~~~~~-~~-~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~---~~~~~~~~-~~~~~~~~~~~~~g~-~ 213 (391)
T 1l0q_A 144 NTVTK---AVINTV-SV-GRSPKGIAVTPDGTKVYVANFDSMSISVIDTVT---NSVIDTVK-VEAAPSGIAVNPEGT-K 213 (391)
T ss_dssp ETTTT---EEEEEE-EC-CSSEEEEEECTTSSEEEEEETTTTEEEEEETTT---TEEEEEEE-CSSEEEEEEECTTSS-E
T ss_pred ECCCC---cEEEEE-ec-CCCcceEEECCCCCEEEEEeCCCCEEEEEECCC---CeEEEEEe-cCCCccceEECCCCC-E
Confidence 99843 334444 22 3567999999999866 6778899999999984 44555554 566889999999974 6
Q ss_pred EEEEE---CCCCEEEEEcCCC
Q psy4510 427 FASGG---ADDQIALWDLAVE 444 (812)
Q Consensus 427 l~s~~---~dg~v~iwd~~~~ 444 (812)
|++++ .++.|++||+...
T Consensus 214 l~~~~~~~~~~~v~~~d~~~~ 234 (391)
T 1l0q_A 214 AYVTNVDKYFNTVSMIDTGTN 234 (391)
T ss_dssp EEEEEECSSCCEEEEEETTTT
T ss_pred EEEEecCcCCCcEEEEECCCC
Confidence 66665 6899999998755
No 126
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.96 E-value=5e-29 Score=267.79 Aligned_cols=251 Identities=15% Similarity=0.152 Sum_probs=182.0
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcC--------CCCcEEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSD--------LKTALQTVDDP 244 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~--------~~~~l~s~~~d 244 (812)
+|...+....+++ ++.+||+|+.|++|+|||+.++... ......+.+|.+.|.+++|+| ++++||+++.|
T Consensus 87 ~~~~~~~~~~~~~-~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 87 LHDGDGNVNSSPV-YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ----------CCE-EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred ccCCCcceeecCC-CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 4444455555566 8889999999999999999887543 224567899999999999998 88999999999
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-------------
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD------------- 311 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~------------- 311 (812)
++|+|||+.++ .++..+.+|...|.+++|+|++..+|++|+.||+|++||+.++......
T Consensus 166 ~tv~~Wd~~~~-------~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s 238 (393)
T 4gq1_A 166 CTLIIWRLTDE-------GPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLT 238 (393)
T ss_dssp SEEEEEEEETT-------EEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEE
T ss_pred CeEEEEECCCC-------ceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEe
Confidence 99999999874 6777888899999999999998668999999999999999876531100
Q ss_pred --------cccccCCCCCEEEEEEc-CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEE-----------
Q psy4510 312 --------QKPLVGHTNSVEDLQWS-PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNV----------- 371 (812)
Q Consensus 312 --------~~~~~~h~~~v~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~----------- 371 (812)
.....+|...|.++.|+ |++. .|++++.|+++++||++...... .+ ..|...+..
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~-~l~s~s~d~~i~vwd~~~~~~~~---~l-~~~~~~~~~~~~~~~~~~~~ 313 (393)
T 4gq1_A 239 LNTLPLVNTCHSSGIASSLANVRWIGSDGS-GILAMCKSGAWLRWNLFANNDYN---EI-SDSTMKLGPKNLLPNVQGIS 313 (393)
T ss_dssp EESGGGC------CCSSSCSEEEEETTTTC-EEEEECTTSEEEEEEC-----------------------CCSCSEEEEC
T ss_pred cccccceeeeecccccccceeeeeecCCCC-EEEEEeCCCCEEEEECccCCCCc---eE-eeecCccccEEEcccccccc
Confidence 11234688899999997 6777 69999999999999998543221 11 222222222
Q ss_pred -------EEEcC-CCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 372 -------ISWNR-TEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 372 -------l~~~~-~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..|++ .+. ++++|+.||.|++||+. .+..+..+..|..+|.+++|+|+| ++||+++.+| +.+|.+.
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~---~~~~~~~~~~~~~~V~svafspdG-~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 314 LFPSLLGACPHPRYMDYFATAHSQHGLIQLINTY---EKDSNSIPIQLGMPIVDFCWHQDG-SHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SSCCSSCCEECSSCTTEEEEEETTTTEEEEEETT---CTTCCEEEEECSSCEEEEEECTTS-SEEEEEESSE-EEEEEEG
T ss_pred ccCcceeEEEccCCCCEEEEEECCCCEEEEEECC---CCcEEEEecCCCCcEEEEEEcCCC-CEEEEEeCCC-eEEEEEe
Confidence 23333 333 67788899999999998 466777788899999999999997 6999998766 7777764
No 127
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.6e-27 Score=251.46 Aligned_cols=195 Identities=10% Similarity=0.012 Sum_probs=156.2
Q ss_pred eeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC--
Q psy4510 229 LQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG-- 306 (812)
Q Consensus 229 l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~-- 306 (812)
..+.+++++|++|+.||.|++||+.++ +.+..+. ...|.++.|+|. +++|+.|++|++|+.....
T Consensus 42 ~~~~~d~~~l~sg~~Dg~v~iwd~~~~-------~~~~~~~--~~~v~~~~~~~~----~~s~s~D~~i~~w~~~~~~~~ 108 (343)
T 3lrv_A 42 KSMYYDKWVCMCRCEDGALHFTQLKDS-------KTITTIT--TPNPRTGGEHPA----IISRGPCNRLLLLYPGNQITI 108 (343)
T ss_dssp SSSSEEEEEEEEEEETTEEEEEEESSS-------SCEEEEE--EECCCTTCCCCS----EEEECSTTEEEEEETTTEEEE
T ss_pred hhhcCCCCEEEEECCCCcEEEEECCCC-------cEEEEEe--cCCceeeeeCCc----eEEecCCCeEEEEEccCceEE
Confidence 345578889999999999999999885 5666665 466788888886 9999999999999876321
Q ss_pred ----cceeccccccCCCCCEEEEEEcC--CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 307 ----AWQVDQKPLVGHTNSVEDLQWSP--GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 307 ----~~~~~~~~~~~h~~~v~~~~~~p--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
..........+|...|.+++|+| +++ +|++++.||+|++||++++ .++......|...|++++|+|++.+
T Consensus 109 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~l~s~s~dg~i~~wd~~~~---~~~~~~~~~~~~~i~~~~~~pdg~~ 184 (343)
T 3lrv_A 109 LDSKTNKVLREIEVDSANEIIYMYGHNEVNTE-YFIWADNRGTIGFQSYEDD---SQYIVHSAKSDVEYSSGVLHKDSLL 184 (343)
T ss_dssp EETTTCCEEEEEECCCSSCEEEEECCC---CC-EEEEEETTCCEEEEESSSS---CEEEEECCCSSCCCCEEEECTTSCE
T ss_pred eecCCcceeEEeecCCCCCEEEEEcCCCCCCC-EEEEEeCCCcEEEEECCCC---cEEEEEecCCCCceEEEEECCCCCE
Confidence 00111222336778999999999 888 6999999999999999854 3344443456678999999999999
Q ss_pred EEEEeCCCcEEEEecCCCCCCCce-EEccc-CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSV-ATFKH-HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~-h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|++|+.||.|++||++. +..+ ..+.. |.++|++++|+|++ .+|++++ ++.|++||++...
T Consensus 185 lasg~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~l~fs~~g-~~l~s~~-~~~v~iwd~~~~~ 246 (343)
T 3lrv_A 185 LALYSPDGILDVYNLSS---PDQASSRFPVDEEAKIKEVKFADNG-YWMVVEC-DQTVVCFDLRKDV 246 (343)
T ss_dssp EEEECTTSCEEEEESSC---TTSCCEECCCCTTSCEEEEEECTTS-SEEEEEE-SSBEEEEETTSST
T ss_pred EEEEcCCCEEEEEECCC---CCCCccEEeccCCCCEEEEEEeCCC-CEEEEEe-CCeEEEEEcCCCC
Confidence 99999999999999984 4555 77887 99999999999987 6899998 5599999998763
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.95 E-value=7.9e-26 Score=251.58 Aligned_cols=335 Identities=10% Similarity=0.050 Sum_probs=245.4
Q ss_pred EeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC--CCCCCCC
Q psy4510 183 DWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK--KRGKGPG 259 (812)
Q Consensus 183 ~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~--~~~~~~~ 259 (812)
+|+| ++.++++++.|++|.+||..+++ ....+. +|. +.+++|+|+|++|++++.++.|++||+ .++
T Consensus 144 ~~~p-~~~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~---- 212 (543)
T 1nir_A 144 DLDL-PNLFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEP---- 212 (543)
T ss_dssp CCCG-GGEEEEEEGGGTEEEEEETTTCC----EEEEEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSC----
T ss_pred ccCC-CCEEEEEEcCCCeEEEEECCCce----EEEEEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCC----
Confidence 3889 89999999999999999998887 445555 443 889999999999999999999999999 553
Q ss_pred CCCCCceEEcCCCCcEEEEEecC----CCCCEEEEEe-CCCcEEEEeCCCCCcceeccccccC----------C-CCCEE
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSS----TEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVG----------H-TNSVE 323 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp----~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~----------h-~~~v~ 323 (812)
+.+.++. +...+..++|+| ++ ++|++++ .+++|.+||..+.+. ...+.. | ...+.
T Consensus 213 ---~~~~~i~-~g~~p~~va~sp~~~~dg-~~l~v~~~~~~~v~v~D~~t~~~----~~~i~~~g~~~~~~~~~~~~~v~ 283 (543)
T 1nir_A 213 ---TKVAEIK-IGIEARSVESSKFKGYED-RYTIAGAYWPPQFAIMDGETLEP----KQIVSTRGMTVDTQTYHPEPRVA 283 (543)
T ss_dssp ---EEEEEEE-CCSEEEEEEECCSTTCTT-TEEEEEEEESSEEEEEETTTCCE----EEEEECCEECSSSCCEESCCCEE
T ss_pred ---cEEEEEe-cCCCcceEEeCCCcCCCC-CEEEEEEccCCeEEEEecccccc----ceeecccCcccCccccccCCceE
Confidence 5666776 456789999999 99 6777776 489999999988763 222221 2 33789
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE-EeCCCcEEEEecCCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS-GGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s-g~~dg~i~iwd~~~~~~~~ 402 (812)
.+.++|+++.++++...++.|.+||+....... +..+ .+...+..+.|+|++++|++ +..++.|.+||+. +++
T Consensus 284 ~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~-~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~---tg~ 357 (543)
T 1nir_A 284 AIIASHEHPEFIVNVKETGKVLLVNYKDIDNLT-VTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK---DRR 357 (543)
T ss_dssp EEEECSSSSEEEEEETTTTEEEEEECTTSSSCE-EEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT---TTE
T ss_pred EEEECCCCCEEEEEECCCCeEEEEEecCCCcce-eEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEECC---CCe
Confidence 999999999888999999999999998543221 1233 35566888999999996655 4568999999998 456
Q ss_pred ceEEccc----CCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 403 SVATFKH----HTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 403 ~~~~~~~----h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
.+..+.. |.+....+ ++|++..+++++. .|++|.+||+......
T Consensus 358 l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~------------------------------ 406 (543)
T 1nir_A 358 LSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHP------------------------------ 406 (543)
T ss_dssp EEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCT------------------------------
T ss_pred EEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCc------------------------------
Confidence 6666653 55444444 5787556777775 5899999999764210
Q ss_pred EcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccc
Q psy4510 478 WHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNE 557 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~ 557 (812)
+.
T Consensus 407 ---~~--------------------------------------------------------------------------- 408 (543)
T 1nir_A 407 ---QY--------------------------------------------------------------------------- 408 (543)
T ss_dssp ---TT---------------------------------------------------------------------------
T ss_pred ---hh---------------------------------------------------------------------------
Confidence 00
Q ss_pred cccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEee-c----CcceEEEEeccccccccCCccccc
Q psy4510 558 RELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVW-G----EVGKVGIWDLKTALQTVDDPFQLA 632 (812)
Q Consensus 558 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~-~----~dg~I~iwd~~~~~~~~~~~~~~~ 632 (812)
.....+.+..|.+.+..++++|++++|.+++- + .+++|.+||+.+....
T Consensus 409 ------------------~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~-------- 462 (543)
T 1nir_A 409 ------------------AWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSVAVFDLKNLDAK-------- 462 (543)
T ss_dssp ------------------BTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCEEEEETTCTTSC--------
T ss_pred ------------------cCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceEEEEECCCCCCC--------
Confidence 00012233344445667888999999998720 0 2789999999987621
Q ss_pred ccccccCCCCCCCCCCeee--------ecCCCCceEEEEeCCCCCCeEEec-----CCCceEEEEecCCCceeEEE
Q psy4510 633 EHNKKRGKGPGIPTPPLFS--------FSGHLTEGFAMDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 633 ~~~~~~~~~~~~~~~~~~~--------~~gh~~~V~~l~~sp~~~~~las~-----s~Dg~v~iWd~~~~~~~~~~ 695 (812)
... +..|...+..++|+| +++.|..+ +.|++|.|||..+++.....
T Consensus 463 ----------------~~~~~v~~~~~~~~~~~~~~~~~~~~-~g~~~~~s~~~~~~~~~~i~v~D~~t~~~~~~i 521 (543)
T 1nir_A 463 ----------------YQVLPIAEWADLGEGAKRVVQPEYNK-RGDEVWFSVWNGKNDSSALVVVDDKTLKLKAVV 521 (543)
T ss_dssp ----------------CEEECHHHHHCCCSSCCEEEEEEECS-SSSEEEEEEECCTTSCCEEEEEETTTTEEEEEE
T ss_pred ----------------eEEeechhhcccCCCCCceEeccCCC-CCCEEEEEeecCCCCCCeEEEEECCCceEEEee
Confidence 122 245678999999999 66666644 34799999999998877665
No 129
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=1.5e-26 Score=231.90 Aligned_cols=219 Identities=16% Similarity=0.102 Sum_probs=164.9
Q ss_pred CCCceEEEEeCCCC----CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee--CCCceE
Q psy4510 175 HLTEGFAMDWSSTE----PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD--DPFQLA 248 (812)
Q Consensus 175 h~~~i~~~~~sp~~----~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~--~d~~i~ 248 (812)
|.+.|.+++|+| + ++++++++. .+.+|++ +.++++.+++ .++.|+
T Consensus 110 ~~~~v~sla~sp-d~~~~~~~l~s~g~--~~~v~~l--------------------------~~g~lv~ss~~g~d~~V~ 160 (356)
T 2w18_A 110 EIREIRALFCSS-DDESEKQVLLKSGN--IKAVLGL--------------------------TKRRLVSSSGTLSDQQVE 160 (356)
T ss_dssp SEEEEEEECC-------CCEEEEEEEE--EEEEEEE--------------------------TTTEEEEEESSSTTCEEE
T ss_pred cccceEEEEECC-CccccccEEEeCCC--eEEEEec--------------------------CCCcEEEecccCCCCcEE
Confidence 567899999999 8 889999885 4888966 4455555533 578888
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecC---CCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC---CCE
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSS---TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT---NSV 322 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp---~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~---~~v 322 (812)
+|++... .+.+..+.+|...+..++|+| ++ .+|++|+.|++|+|||+.+++ ....+.+|. ..+
T Consensus 161 ~~~~s~d------G~~~~s~~~~~~~v~~l~fs~~~g~~-~~LaSgS~D~TIkIWDl~TGk----~l~tL~g~~~~v~~v 229 (356)
T 2w18_A 161 VMTFAED------GGGKENQFLMPPEETILTFAEVQGMQ-EALLGTTIMNNIVIWNLKTGQ----LLKKMHIDDSYQASV 229 (356)
T ss_dssp EEEECTT------SCEEEEEEECCCSSCEEEEEEEETST-TEEEEEETTSEEEEEETTTCC----EEEEEECCC---CCC
T ss_pred EEEECCC------CceeeeeccCCCceeeEEeeccCCCC-ceEEEecCCCcEEEEECCCCc----EEEEEcCCCcceeee
Confidence 8887441 266677888999999999999 55 799999999999999999987 566666543 467
Q ss_pred EEEEEcCCCCeE-----------EEEEECCCeEEEEECCCCCcccceee----cCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 323 EDLQWSPGEKRV-----------LASCSVDLSIRIWDTRVINTKSCMLT----LPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 323 ~~~~~~p~~~~~-----------l~s~~~dg~i~iwd~~~~~~~~~~~~----~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
.+++|+|++..+ +++|+.|++|++||..++ .++.. ++.+|...+.+..++ +.++++|+.|
T Consensus 230 ~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tg---k~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~D 304 (356)
T 2w18_A 230 CHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTT---LSVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTS 304 (356)
T ss_dssp EEEEEEETTEEEEEEC------------CCEEEEEEETTTT---EEEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETT
T ss_pred EEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCC---EEEEEEEeeccCCCcceeEccccC--CCEEEEEcCC
Confidence 888999999843 367889999999999854 33322 235676666555554 7799999999
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEE-EEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVT-TVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~-~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
|+|+|||++ .++.+.++.+|...+. .++|+|++ .+|++|+.|++|+|||+.
T Consensus 305 gTIkIWDl~---tGk~l~tL~gH~~~vvs~vafSPDG-~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 305 GTIAIWDLL---LGQCTALLPPVSDQHWSFVKWSGTD-SHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp SCEEEEETT---TCSEEEEECCC--CCCCEEEECSSS-SEEEEECTTSCEEEEEEC
T ss_pred CcEEEEECC---CCcEEEEecCCCCCeEEEEEECCCC-CEEEEEECCCcEEEecCC
Confidence 999999998 6889999999987665 58999997 699999999999999963
No 130
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.94 E-value=2.5e-24 Score=239.55 Aligned_cols=314 Identities=10% Similarity=-0.003 Sum_probs=234.4
Q ss_pred ecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEEC--CCCCcccc
Q psy4510 280 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDT--RVINTKSC 357 (812)
Q Consensus 280 ~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~--~~~~~~~~ 357 (812)
|+|++ .++++++.+++|.+||..+++ ....+..+.. +..++|+|+++ .|++++.|++|++||+ .+ ..+
T Consensus 145 ~~p~~-~~~vs~~~d~~V~v~D~~t~~----~~~~i~~g~~-~~~v~~spdg~-~l~v~~~d~~V~v~D~~~~t---~~~ 214 (543)
T 1nir_A 145 LDLPN-LFSVTLRDAGQIALVDGDSKK----IVKVIDTGYA-VHISRMSASGR-YLLVIGRDARIDMIDLWAKE---PTK 214 (543)
T ss_dssp CCGGG-EEEEEEGGGTEEEEEETTTCC----EEEEEECSTT-EEEEEECTTSC-EEEEEETTSEEEEEETTSSS---CEE
T ss_pred cCCCC-EEEEEEcCCCeEEEEECCCce----EEEEEecCcc-cceEEECCCCC-EEEEECCCCeEEEEECcCCC---CcE
Confidence 78887 788999999999999999887 4445552222 88999999999 5888899999999999 53 444
Q ss_pred eeecCCcCCCCeEEEEEcC----CCCEEEEEeC-CCcEEEEecCCCCCCCceEEccc----------C-CCCEEEEEEcc
Q psy4510 358 MLTLPNAHTSDVNVISWNR----TEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKH----------H-TAPVTTVEWHP 421 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~----~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~----------h-~~~v~~v~~~p 421 (812)
+.++. +...+..++|+| +|+++++++. +++|.+||.. +.+++..+.. | ...+.++.++|
T Consensus 215 ~~~i~--~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~---t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~ 289 (543)
T 1nir_A 215 VAEIK--IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGE---TLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASH 289 (543)
T ss_dssp EEEEE--CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETT---TCCEEEEEECCEECSSSCCEESCCCEEEEEECS
T ss_pred EEEEe--cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEecc---ccccceeecccCcccCccccccCCceEEEEECC
Confidence 55552 455689999999 9998888874 8999999987 4566666653 2 23789999999
Q ss_pred CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 422 TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 422 ~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
++..++++...+++|.+||+...+.. . +..
T Consensus 290 ~~~~~~vs~~~~g~i~vvd~~~~~~l----------------~--------~~~-------------------------- 319 (543)
T 1nir_A 290 EHPEFIVNVKETGKVLLVNYKDIDNL----------------T--------VTS-------------------------- 319 (543)
T ss_dssp SSSEEEEEETTTTEEEEEECTTSSSC----------------E--------EEE--------------------------
T ss_pred CCCEEEEEECCCCeEEEEEecCCCcc----------------e--------eEE--------------------------
Confidence 88888888888999999998765210 0 000
Q ss_pred CCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccce
Q psy4510 502 DLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNS 581 (812)
Q Consensus 502 ~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 581 (812)
T Consensus 320 -------------------------------------------------------------------------------- 319 (543)
T 1nir_A 320 -------------------------------------------------------------------------------- 319 (543)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecC----CCC
Q psy4510 582 YFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG----HLT 657 (812)
Q Consensus 582 ~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----h~~ 657 (812)
..+...+..++|+|+|++++++. ..+++|.+||+.+++ ++..+.. |.+
T Consensus 320 --i~~~~~~~~~~~spdg~~l~va~-~~~~~v~v~D~~tg~-------------------------l~~~i~~g~~ph~g 371 (543)
T 1nir_A 320 --IGAAPFLHDGGWDSSHRYFMTAA-NNSNKVAVIDSKDRR-------------------------LSALVDVGKTPHPG 371 (543)
T ss_dssp --EECCSSCCCEEECTTSCEEEEEE-GGGTEEEEEETTTTE-------------------------EEEEEECSSSBCCT
T ss_pred --eccCcCccCceECCCCCEEEEEe-cCCCeEEEEECCCCe-------------------------EEEeeccCCCCCCC
Confidence 00011334578999999887663 568999999999886 4444442 655
Q ss_pred ceEEEEeCCCCCCeEEecC-CCceEEEEecCC-------CceeEE----------EEecCCCCEEEeec-------CCCe
Q psy4510 658 EGFAMDWSSTEPGVLATGD-CKRNIHIWTPRE-------AGAWSV----------YLYTNRFGVLATGD-------CKRN 712 (812)
Q Consensus 658 ~V~~l~~sp~~~~~las~s-~Dg~v~iWd~~~-------~~~~~~----------~~~s~dg~~lasgs-------~dg~ 712 (812)
....+ ++|+++.+++|+. .|++|++|++.+ .+++.. +.++|+|++|++++ .+++
T Consensus 372 ~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~ 450 (543)
T 1nir_A 372 RGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQS 450 (543)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTC
T ss_pred CCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCce
Confidence 44444 4674577888876 689999999987 444322 35899999999987 2779
Q ss_pred EEEeecCCCCCccccccc--------ccCCCcceeEeEEecCCceeEEee----ccCCceEEeeecCcce
Q psy4510 713 IHIWTPREAGAWQVDQKP--------LVGHTNSVEDLQWSPGEKRVLASC----SVDRSNRIGARRDMLY 770 (812)
Q Consensus 713 i~iwd~~~~~~~~~~~~~--------~~gH~~~V~~l~fs~dg~~~L~s~----s~Dg~i~iWd~~~~~~ 770 (812)
|.|||+.+++.. ... +..|...|..+.|+|+|+.+++|. +.|++|.|||.+.++.
T Consensus 451 v~v~d~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t~~~ 517 (543)
T 1nir_A 451 VAVFDLKNLDAK---YQVLPIAEWADLGEGAKRVVQPEYNKRGDEVWFSVWNGKNDSSALVVVDDKTLKL 517 (543)
T ss_dssp EEEEETTCTTSC---CEEECHHHHHCCCSSCCEEEEEEECSSSSEEEEEEECCTTSCCEEEEEETTTTEE
T ss_pred EEEEECCCCCCC---eEEeechhhcccCCCCCceEeccCCCCCCEEEEEeecCCCCCCeEEEEECCCceE
Confidence 999999998752 122 356678999999999999555553 3589999999999873
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=1.6e-24 Score=233.90 Aligned_cols=304 Identities=12% Similarity=0.101 Sum_probs=225.5
Q ss_pred CCCceEEEEeCCCCCCeEEEec----CCC----cEEEEcc--CCCCcccccccccCCCCCCeeeeeEcC-----------
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGD----CKR----NIHIWTP--REAGAWQVDQKPLGGHTNSAEDLQWSD----------- 233 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~----~dg----~v~iwd~--~~~~~~~~~~~~l~~h~~~V~~l~~s~----------- 233 (812)
+...+...+|++...+++++|+ .+| .|+|||+ .+++. .....+.+|...++.+++++
T Consensus 61 ~~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~ 138 (415)
T 2hqs_A 61 SAQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTV--LAQNSYKVNKQWLRYAGHTASDEVFEKLTGI 138 (415)
T ss_dssp SGGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCE--EEEEEEEECGGGHHHHHHHHHHHHHHHHHSS
T ss_pred cccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCE--EeeeEEEcChhHHHHHHHHHHHHHHHHHcCC
Confidence 3457778899995556787886 567 8999999 77762 12356888999999888875
Q ss_pred ---CCCcEEEeeCC------CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC---cEEEEe
Q psy4510 234 ---LKTALQTVDDP------FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR---NIHIWT 301 (812)
Q Consensus 234 ---~~~~l~s~~~d------~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg---~i~vwd 301 (812)
.+..++.++.+ +.|++||+.. .....+.+|...+.+++|+|++ ..|++++.++ .|++||
T Consensus 139 ~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g--------~~~~~l~~~~~~v~~~~~Spdg-~~la~~s~~~~~~~i~~~d 209 (415)
T 2hqs_A 139 KGAFRTRIAYVVQTNGGQFPYELRVSDYDG--------YNQFVVHRSPQPLMSPAWSPDG-SKLAYVTFESGRSALVIQT 209 (415)
T ss_dssp CCCTTCEEEEEEECSSSSCCEEEEEEETTS--------CSCEEEEEESSCEEEEEECTTS-SEEEEEECTTSSCEEEEEE
T ss_pred CCcCCCEEEEEEecCCCCccceEEEEcCCC--------CCCEEEeCCCCcceeeEEcCCC-CEEEEEEecCCCcEEEEEE
Confidence 25667766654 7999999975 4567788899999999999999 7888888775 999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe--EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS--IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
+.++. ...+..|...+.+++|+|+++.++++++.++. |++||++++. ...+ ..|...+.+++|+|+|+
T Consensus 210 ~~tg~-----~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~----~~~l-~~~~~~~~~~~~spdg~ 279 (415)
T 2hqs_A 210 LANGA-----VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ----IRQV-TDGRSNNTEPTWFPDSQ 279 (415)
T ss_dssp TTTCC-----EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC----EEEC-CCCSSCEEEEEECTTSS
T ss_pred CCCCc-----EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCC----EEeC-cCCCCcccceEECCCCC
Confidence 99876 23466788899999999999975557777665 9999998532 2344 56788999999999999
Q ss_pred EEEEEeC-CC--cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC---CCEEEEEcCCCCchhHHHhh
Q psy4510 380 LIVSGGD-DG--CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD---DQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 380 ~l~sg~~-dg--~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d---g~v~iwd~~~~~~~~~~~~~ 453 (812)
+|++++. ++ .|.+||+.. + ....+..|...+.+++|+|++. +|++++.+ ..|.+||+.+..
T Consensus 280 ~l~~~s~~~g~~~i~~~d~~~---~-~~~~l~~~~~~~~~~~~spdG~-~l~~~~~~~g~~~i~~~d~~~~~-------- 346 (415)
T 2hqs_A 280 NLAFTSDQAGRPQVYKVNING---G-APQRITWEGSQNQDADVSSDGK-FMVMVSSNGGQQHIAKQDLATGG-------- 346 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTS---S-CCEECCCSSSEEEEEEECTTSS-EEEEEEECSSCEEEEEEETTTCC--------
T ss_pred EEEEEECCCCCcEEEEEECCC---C-CEEEEecCCCcccCeEECCCCC-EEEEEECcCCceEEEEEECCCCC--------
Confidence 8887775 45 577778863 2 3455666778899999999984 66666653 589999998763
Q ss_pred hhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC---eEEEEeCCCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 454 AELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG---FNIFRTISDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
......+ ..+..++|+|++..+++++..++ +.+|+ ... ........+.+.|.+++|+|.
T Consensus 347 ---------~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d-~~g--~~~~~l~~~~~~v~~~~~~~~ 408 (415)
T 2hqs_A 347 ---------VQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVS-TDG--RFKARLPATDGQVKFPAWSPY 408 (415)
T ss_dssp ---------EEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEE-TTS--CCEEECCCSSSEEEEEEECCC
T ss_pred ---------EEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEE-CCC--CcEEEeeCCCCCCcCCccccc
Confidence 2222222 37899999999976766666654 33333 222 223334455678999999997
No 132
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.93 E-value=2.5e-24 Score=232.44 Aligned_cols=298 Identities=10% Similarity=0.038 Sum_probs=221.5
Q ss_pred CCcEEEEEecCCCCCEEEEEe----CCC----cEEEEeC--CCCCcceeccccccCCCCCEEEEEEcC------------
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD----CKR----NIHIWTP--REAGAWQVDQKPLVGHTNSVEDLQWSP------------ 329 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~----~dg----~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~~~~~p------------ 329 (812)
...+...+|++.+..++++|+ .+| .|+|||+ .+++. .....+.+|...+..+++++
T Consensus 62 ~~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~ 139 (415)
T 2hqs_A 62 AQEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTV--LAQNSYKVNKQWLRYAGHTASDEVFEKLTGIK 139 (415)
T ss_dssp GGGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCE--EEEEEEEECGGGHHHHHHHHHHHHHHHHHSSC
T ss_pred ccCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCE--EeeeEEEcChhHHHHHHHHHHHHHHHHHcCCC
Confidence 357788899999977888886 467 8999999 77662 12345778888888777765
Q ss_pred --CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCC
Q psy4510 330 --GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRF 398 (812)
Q Consensus 330 --~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~ 398 (812)
.+.. ++.++.+ +.|++||+... ....+ ..|...+.+++|+|+|++|++++.++ .|++||++.
T Consensus 140 ~~~~~~-l~~~s~~~~~~~~~~i~i~d~~g~----~~~~l-~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~t- 212 (415)
T 2hqs_A 140 GAFRTR-IAYVVQTNGGQFPYELRVSDYDGY----NQFVV-HRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLAN- 212 (415)
T ss_dssp CCTTCE-EEEEEECSSSSCCEEEEEEETTSC----SCEEE-EEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTT-
T ss_pred CcCCCE-EEEEEecCCCCccceEEEEcCCCC----CCEEE-eCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCC-
Confidence 2454 4444443 79999999732 23444 56888999999999999999999875 999999974
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL 476 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 476 (812)
++. ..+..|...+.+++|+|++..++++++.++. |++||+.+.+. .
T Consensus 213 --g~~-~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-----------------~------------ 260 (415)
T 2hqs_A 213 --GAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-----------------R------------ 260 (415)
T ss_dssp --CCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-----------------E------------
T ss_pred --CcE-EEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-----------------E------------
Confidence 333 4566788899999999998544447776665 88888865410 0
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDN 556 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~ 556 (812)
T Consensus 261 -------------------------------------------------------------------------------- 260 (415)
T 2hqs_A 261 -------------------------------------------------------------------------------- 260 (415)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcc--eEEEEeccccccccCCccccccc
Q psy4510 557 ERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVG--KVGIWDLKTALQTVDDPFQLAEH 634 (812)
Q Consensus 557 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg--~I~iwd~~~~~~~~~~~~~~~~~ 634 (812)
.+..|...+.+++|+|+|++|++++ ..++ .|++||+.++.
T Consensus 261 -------------------------~l~~~~~~~~~~~~spdg~~l~~~s-~~~g~~~i~~~d~~~~~------------ 302 (415)
T 2hqs_A 261 -------------------------QVTDGRSNNTEPTWFPDSQNLAFTS-DQAGRPQVYKVNINGGA------------ 302 (415)
T ss_dssp -------------------------ECCCCSSCEEEEEECTTSSEEEEEE-CTTSSCEEEEEETTSSC------------
T ss_pred -------------------------eCcCCCCcccceEECCCCCEEEEEE-CCCCCcEEEEEECCCCC------------
Confidence 0111223567788999999888873 2345 67777887764
Q ss_pred ccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC---ceEEEEecCCCce--------eEEEEecCCCCE
Q psy4510 635 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---RNIHIWTPREAGA--------WSVYLYTNRFGV 703 (812)
Q Consensus 635 ~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D---g~v~iWd~~~~~~--------~~~~~~s~dg~~ 703 (812)
...+..|...+.+++|+| ++++|++++.+ ..|++||+.+++. ....+|+|||++
T Consensus 303 --------------~~~l~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg~~ 367 (415)
T 2hqs_A 303 --------------PQRITWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNGTM 367 (415)
T ss_dssp --------------CEECCCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTSSE
T ss_pred --------------EEEEecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCCCE
Confidence 233455777899999999 78888887764 6899999998654 344579999999
Q ss_pred EEeecCCC---eEEEeecCCCCCcccccccccCCCcceeEeEEecCCc
Q psy4510 704 LATGDCKR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 748 (812)
Q Consensus 704 lasgs~dg---~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~ 748 (812)
|++++.++ .|++|++..+ ....+.+|.+.|.+++|||...
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~-----~~~~l~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGR-----FKARLPATDGQVKFPAWSPYLH 410 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSC-----CEEECCCSSSEEEEEEECCCCC
T ss_pred EEEEEcCCCccEEEEEECCCC-----cEEEeeCCCCCCcCCccccccc
Confidence 99988877 8999998754 3567899999999999999754
No 133
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.92 E-value=1e-23 Score=246.57 Aligned_cols=232 Identities=13% Similarity=0.086 Sum_probs=164.9
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCC---CeeeeeEcCCCCcEEEeeCC---------C
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN---SAEDLQWSDLKTALQTVDDP---------F 245 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~s~~~d---------~ 245 (812)
.+.+++|+| +|+++++ +.||+|++||+.+++ ....+.+|.. .|.+++|||||++|++++.+ +
T Consensus 18 ~~~~~~~sp-dg~~~~~-~~dg~i~~~d~~~g~----~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 18 HDPEAKWIS-DTEFIYR-EQKGTVRLWNVETNT----STVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCBSS-SSCBCCC-CSSSCEEEBCGGGCC----CEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred cccccEEcC-CCcEEEE-eCCCCEEEEECCCCc----EEEEeccccccccccceEEECCCCCEEEEEecCccceeeccee
Confidence 466789999 9998877 679999999999886 4455556654 49999999999999999764 6
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCC-----
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTN----- 320 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~----- 320 (812)
.+.+||+.++. .+.+....+|...+..++|||+| ..|+.++. +.|++|++.++.. ......+..
T Consensus 92 ~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~SPdG-~~la~~~~-~~i~~~~~~~g~~----~~~~~~~~~~~~~~ 160 (723)
T 1xfd_A 92 YYVLSKIPHGD-----PQSLDPPEVSNAKLQYAGWGPKG-QQLIFIFE-NNIYYCAHVGKQA----IRVVSTGKEGVIYN 160 (723)
T ss_dssp EEEEEESSSCC-----CEECCCTTCCSCCCSBCCBCSST-TCEEEEET-TEEEEESSSSSCC----EEEECCCBTTTEEE
T ss_pred eEEEEECCCCc-----eEeccCCccccccccccEECCCC-CEEEEEEC-CeEEEEECCCCce----EEEecCCCCCceEC
Confidence 78899998862 12222233455568899999999 67787775 7999999988763 222222222
Q ss_pred -------------CEEEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 321 -------------SVEDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 321 -------------~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
.+.+++|+|+|+. |++++ .++.+++|++.... ..+...+..+.|.++|.. ..
T Consensus 161 g~~~~v~~ee~~~~~~~~~~SpDg~~-la~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~G~~----~~ 226 (723)
T 1xfd_A 161 GLSDWLYEEEILKTHIAHWWSPDGTR-LAYAAINDSRVPIMELPTYT---------GSIYPTVKPYHYPKAGSE----NP 226 (723)
T ss_dssp EECCHHHHHTTSSSSEEEEECTTSSE-EEEEEEECTTSCEEEECCCS---------SSSSCCCEEEECCBTTSC----CC
T ss_pred cccceeEEEEeccCcceEEECCCCCE-EEEEEECCCccceEEeeccC---------CcCCCcceeccCCCCCCC----CC
Confidence 2378999999996 55554 45678888875321 112345788999887752 33
Q ss_pred CCcEEEEecCCCCCCCceEEcccC------CCCEEEEEEccCCCcEEEEEEC----CCCEEEEEcCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHH------TAPVTTVEWHPTESSTFASGGA----DDQIALWDLAVE 444 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h------~~~v~~v~~~p~~~~~l~s~~~----dg~v~iwd~~~~ 444 (812)
+..|++||+.. +.....+..+ ...+.+++|+|++ ++|++.+. +..|.+||+.+.
T Consensus 227 ~~~l~~~d~~~---~~~~~~l~~~~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~i~~~d~~~g 290 (723)
T 1xfd_A 227 SISLHVIGLNG---PTHDLEMMPPDDPRMREYYITMVKWATST-KVAVTWLNRAQNVSILTLCDATTG 290 (723)
T ss_dssp EEEEEEEESSS---SCCCEECCCCCCGGGSSEEEEEEEESSSS-EEEEEEEETTSCEEEEEEEETTTC
T ss_pred eeEEEEEECCC---CceeEEeeCCccCCCccceeEEEEEeCCC-eEEEEEEcCCCCeEEEEEEeCCCC
Confidence 45899999974 3334455443 6678999999997 46665543 246888887765
No 134
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.91 E-value=2.5e-22 Score=235.38 Aligned_cols=201 Identities=10% Similarity=0.058 Sum_probs=145.0
Q ss_pred CCCeeeeeEcCCCCcEEEeeC-CC-----ceEEeeCCCCCCCCCCCCCceEEcCCC------------------------
Q psy4510 223 TNSAEDLQWSDLKTALQTVDD-PF-----QLAEHNKKRGKGPGIPTPPLFSFSGHL------------------------ 272 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~-d~-----~i~vwd~~~~~~~~~~~~~~~~~~~h~------------------------ 272 (812)
...|.+++|||||++|++++. ++ .|++||+.++ +....+..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSG-------QTRLLVDSKVVLPGTETLSDEEKARRERQRIAAM 108 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTC-------CEEEEECGGGTC--------------------CC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCC-------ceeEccchhhcccccccccchhhhhhhhhhhccc
Confidence 457999999999999999998 88 8999999885 3344444332
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVI 352 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~ 352 (812)
..+.+++|||+| .+|++++. +.|++||+.++... ....+..|...+.+++|+|+|+. |+.++ ++.|++||+.++
T Consensus 109 ~~v~~~~~SpDg-~~l~~~~~-~~i~~~d~~~~~~~--~~~~l~~~~~~~~~~~~SPDG~~-la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 109 TGIVDYQWSPDA-QRLLFPLG-GELYLYDLKQEGKA--AVRQLTHGEGFATDAKLSPKGGF-VSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp EESCCCEECTTS-SEEEEEET-TEEEEEESSSCSTT--SCCBCCCSSSCEEEEEECTTSSE-EEEEE-TTEEEEEETTTT
T ss_pred cCcceeEECCCC-CEEEEEeC-CcEEEEECCCCCcc--eEEEcccCCcccccccCCCCCCE-EEEEe-CCcEEEEecCCC
Confidence 237899999999 78888776 99999999887200 13456678888999999999994 77766 569999999853
Q ss_pred CcccceeecCCcCCCC----------------eEEEEEcCCCCEEEEEeCCC----------------------------
Q psy4510 353 NTKSCMLTLPNAHTSD----------------VNVISWNRTEPLIVSGGDDG---------------------------- 388 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~----------------v~~l~~~~~~~~l~sg~~dg---------------------------- 388 (812)
. . ..+...+... +.+++|+|+|++|++++.|+
T Consensus 183 ~---~-~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~ 258 (741)
T 2ecf_A 183 R---Q-MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGD 258 (741)
T ss_dssp E---E-EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTS
T ss_pred C---E-EEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCC
Confidence 2 2 2221223222 47899999999888887665
Q ss_pred -----cEEEEecCCCCCCCceEEcc--cCCCCEEEEEEccCCCcEEEEEEC-----CCCEEEEEcCCC
Q psy4510 389 -----CIHVWDLRRFKKGSSVATFK--HHTAPVTTVEWHPTESSTFASGGA-----DDQIALWDLAVE 444 (812)
Q Consensus 389 -----~i~iwd~~~~~~~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~-----dg~v~iwd~~~~ 444 (812)
.|.+||+.. .++...... .|...+.+++| |++. .|++++. +..|.+||+.+.
T Consensus 259 ~~~~~~l~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~-pDg~-~l~~~~~~~~~~~~~i~~~d~~~g 322 (741)
T 2ecf_A 259 ANVQVKLGVISPAE--QAQTQWIDLGKEQDIYLARVNW-RDPQ-HLSFQRQSRDQKKLDLVEVTLASN 322 (741)
T ss_dssp CCCEEEEEEECSST--TCCCEEECCCSCSSEEEEEEEE-EETT-EEEEEEEETTSSEEEEEEEETTTC
T ss_pred CCCeeEEEEEECCC--CCceEEecCCCCcceEEEEEEe-CCCC-EEEEEEecccCCeEEEEEEECCCC
Confidence 788888863 033333332 47778899999 9875 5555443 456888887665
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.90 E-value=5e-22 Score=232.80 Aligned_cols=317 Identities=9% Similarity=0.036 Sum_probs=222.3
Q ss_pred CCceEEEEeCCCCCCeEEEecC-CC-----cEEEEccCCCCcccccccccCCCC------------------------CC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-KR-----NIHIWTPREAGAWQVDQKPLGGHT------------------------NS 225 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-dg-----~v~iwd~~~~~~~~~~~~~l~~h~------------------------~~ 225 (812)
...+.+++||| +|++||+++. |+ .|++||+.+++. ...+..+. ..
T Consensus 36 ~~~~~~~~~Sp-dG~~la~~~~~d~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (741)
T 2ecf_A 36 GPTLMKPKVAP-DGSRVTFLRGKDSDRNQLDLWSYDIGSGQT----RLLVDSKVVLPGTETLSDEEKARRERQRIAAMTG 110 (741)
T ss_dssp CCCCEEEEECT-TSSEEEEEECCSSCTTEEEEEEEETTTCCE----EEEECGGGTC--------------------CCEE
T ss_pred CCCCCCceEec-CCCEEEEEeccCCCCcccEEEEEECCCCce----eEccchhhcccccccccchhhhhhhhhhhccccC
Confidence 45689999999 9999999988 88 899999988763 22232222 34
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~ 305 (812)
|.+++|||||++|++++. +.|++|++.++. ......+..|...+..++|||+| .+|+.++ ++.|++||+.++
T Consensus 111 v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~-----~~~~~~l~~~~~~~~~~~~SPDG-~~la~~~-~~~i~~~d~~~g 182 (741)
T 2ecf_A 111 IVDYQWSPDAQRLLFPLG-GELYLYDLKQEG-----KAAVRQLTHGEGFATDAKLSPKG-GFVSFIR-GRNLWVIDLASG 182 (741)
T ss_dssp SCCCEECTTSSEEEEEET-TEEEEEESSSCS-----TTSCCBCCCSSSCEEEEEECTTS-SEEEEEE-TTEEEEEETTTT
T ss_pred cceeEECCCCCEEEEEeC-CcEEEEECCCCC-----cceEEEcccCCcccccccCCCCC-CEEEEEe-CCcEEEEecCCC
Confidence 899999999999999887 999999998741 00445677788899999999999 7888877 469999999876
Q ss_pred CcceeccccccCCCCC----------------EEEEEEcCCCCeEEEEEECCC---------------------------
Q psy4510 306 GAWQVDQKPLVGHTNS----------------VEDLQWSPGEKRVLASCSVDL--------------------------- 342 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~----------------v~~~~~~p~~~~~l~s~~~dg--------------------------- 342 (812)
.. ......+... +..++|+|+|+. |++++.|+
T Consensus 183 ~~----~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~-l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g 257 (741)
T 2ecf_A 183 RQ----MQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSA-IAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAG 257 (741)
T ss_dssp EE----EECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSC-EEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTT
T ss_pred CE----EEeccCCccceeccccceeeeeccccccceEECCCCCE-EEEEEEcCCCCceEecCCCCCCcccceEeecCCCC
Confidence 52 2222222222 478999999995 66666554
Q ss_pred ------eEEEEECCC-CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-----CCcEEEEecCCCCCCCceEEcccC
Q psy4510 343 ------SIRIWDTRV-INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-----DGCIHVWDLRRFKKGSSVATFKHH 410 (812)
Q Consensus 343 ------~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-----dg~i~iwd~~~~~~~~~~~~~~~h 410 (812)
.|++||+.+ +... .......|...+..++| |+|++|++++. ++.|++||+.. ++....+..+
T Consensus 258 ~~~~~~~l~~~d~~~~~~~~--~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~---g~~~~~~~~~ 331 (741)
T 2ecf_A 258 DANVQVKLGVISPAEQAQTQ--WIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLAS---NQQRVLAHET 331 (741)
T ss_dssp SCCCEEEEEEECSSTTCCCE--EECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTT---CCEEEEEEEE
T ss_pred CCCCeeEEEEEECCCCCceE--EecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCC---CceEEEEEcC
Confidence 788899875 4321 11111257788999999 99998886653 56799999973 5555555544
Q ss_pred CC----CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEE-EEcCCCCCE
Q psy4510 411 TA----PVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKEL-HWHPQLPGT 485 (812)
Q Consensus 411 ~~----~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~p~~~~~ 485 (812)
.. .+..++|+|++. ++++++.|+.++||.+.... .......+...+..+ .|+|++..+
T Consensus 332 ~~~~~~~~~~~~~spdg~-~~~~~~~~g~~~l~~~~~~~----------------~~~~l~~~~~~v~~~~~~s~dg~~l 394 (741)
T 2ecf_A 332 SPTWVPLHNSLRFLDDGS-ILWSSERTGFQHLYRIDSKG----------------KAAALTHGNWSVDELLAVDEKAGLA 394 (741)
T ss_dssp CSSCCCCCSCCEECTTSC-EEEEECTTSSCEEEEECSSS----------------CEEESCCSSSCEEEEEEEETTTTEE
T ss_pred CCCcCCcCCceEECCCCe-EEEEecCCCccEEEEEcCCC----------------CeeeeeecceEEEeEeEEeCCCCEE
Confidence 43 456899999985 88899999988999876431 111222334567777 599998777
Q ss_pred EEEEeCC---CeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeC
Q psy4510 486 IISTANS---GFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 535 (812)
Q Consensus 486 ~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~ 535 (812)
++++..+ ...+|.......... .......+..++|+|++..+++...+
T Consensus 395 ~~~~~~~~~~~~~l~~~~~~g~~~~--~l~~~~~~~~~~~spdg~~l~~~~~~ 445 (741)
T 2ecf_A 395 YFRAGIESARESQIYAVPLQGGQPQ--RLSKAPGMHSASFARNASVYVDSWSN 445 (741)
T ss_dssp EEEECSSCTTCBEEEEEETTCCCCE--ECCCSCSEEEEEECTTSSEEEEEEEE
T ss_pred EEEEeCCCCceEEEEEEEcCCCCee--ecccCCCceEEEECCCCCEEEEEecC
Confidence 7777665 466776543222111 11224568899999996555555443
No 136
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.89 E-value=1.3e-21 Score=201.25 Aligned_cols=259 Identities=15% Similarity=0.104 Sum_probs=191.4
Q ss_pred EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC-CCCCCCCCCCceEEcCC-
Q psy4510 194 TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR-GKGPGIPTPPLFSFSGH- 271 (812)
Q Consensus 194 t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~-~~~~~~~~~~~~~~~~h- 271 (812)
+++.++.|++||+.+++ ...+..|...|.+++|+|++++|++++ ++.|.+|++.+ + ++.....+|
T Consensus 17 ~~~~~~~i~~~d~~~~~-----~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~-------~~~~~~~~~~ 83 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRK-----MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDP-------SPEKVDTGFA 83 (297)
T ss_dssp -CCCCEEEEEEETTTTE-----EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCC-------SCEECCCTTC
T ss_pred CCCcceeEEEEeCCCCc-----eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCC-------CceEeccccc
Confidence 45678999999998765 234566899999999999999999986 78999999987 5 444445555
Q ss_pred CCcEEEEEecCCCCCEEEEEe--CCCcEEEEeC--CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD--CKRNIHIWTP--REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~--~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
...+.+++|+|++ .+|++++ .++.+.||.+ ..+. ...+..+ ..+..++|+|+++.++++++.++.++||
T Consensus 84 ~~~~~~~~~spdg-~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~-~~~~~~~~spdg~~l~~~~~~~~~~~l~ 156 (297)
T 2ojh_A 84 TICNNDHGISPDG-ALYAISDKVEFGKSAIYLLPSTGGT-----PRLMTKN-LPSYWHGWSPDGKSFTYCGIRDQVFDIY 156 (297)
T ss_dssp CCBCSCCEECTTS-SEEEEEECTTTSSCEEEEEETTCCC-----CEECCSS-SSEEEEEECTTSSEEEEEEEETTEEEEE
T ss_pred cccccceEECCCC-CEEEEEEeCCCCcceEEEEECCCCc-----eEEeecC-CCccceEECCCCCEEEEEECCCCceEEE
Confidence 3678899999999 7888887 3345555554 4432 2333333 3489999999999766688899999999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcE
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESST 426 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 426 (812)
+++... .....+ ..+...+.+++|+|++++|+.++ .++.+++|++.. ....+..+..|...+..++|+|++ .+
T Consensus 157 ~~~~~~--~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~--~~~~~~~~~~~~~~~~~~~~s~dg-~~ 230 (297)
T 2ojh_A 157 SMDIDS--GVETRL-THGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRV--DGSSVERITDSAYGDWFPHPSPSG-DK 230 (297)
T ss_dssp EEETTT--CCEEEC-CCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEET--TSSCEEECCCCSEEEEEEEECTTS-SE
T ss_pred EEECCC--CcceEc-ccCCCccccceECCCCCEEEEEecCCCCccEEEECC--CCCCcEEEecCCcccCCeEECCCC-CE
Confidence 975321 223334 56778899999999999777655 589999999864 345677788888889999999997 46
Q ss_pred EEEEECC-----------CCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 427 FASGGAD-----------DQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 427 l~s~~~d-----------g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
|++++.+ +.|.+||+...+.. .+.....+...+..++|+|++..+++++..+
T Consensus 231 l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~--------------~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 231 VVFVSYDADVFDHPRDLDVRVQLMDMDGGNVE--------------TLFDLFGGQGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp EEEEEEETTCCSCCSSEEEEEEEEETTSCSCE--------------EEEEEEESTTTSCSCCBCTTSSEEEEEEECC
T ss_pred EEEEEcCCCCCcccccCceEEEEEecCCCCce--------------eeeccCCCCcccccceECCCCCEEEEEEecc
Confidence 6666654 56999999876421 2333334456789999999987666666554
No 137
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=1.8e-20 Score=196.42 Aligned_cols=299 Identities=8% Similarity=0.044 Sum_probs=196.8
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSC 357 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 357 (812)
..|.+++...+++++.++.|.+||+.+++ ....+..+...+ .++|+|+++.+++++..++.|.+||+.+... .
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~--~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE----ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPP--K 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC----EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSC--E
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc----eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCce--e
Confidence 34666664668888899999999999876 333344455566 9999999997666666689999999985432 0
Q ss_pred eeecCCcCCCCeEEEEEcCCCCEEEEEeCCC---cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 358 MLTLPNAHTSDVNVISWNRTEPLIVSGGDDG---CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg---~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
...+ ..+.....+++|+|++++++++..++ .|.+||+. .++.+..+.. .....+++|+|++..++++...++
T Consensus 76 ~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~spdg~~l~~~~~~~~ 150 (331)
T 3u4y_A 76 VVAI-QEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFL---KNKFISTIPI-PYDAVGIAISPNGNGLILIDRSSA 150 (331)
T ss_dssp EEEE-EECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETT---TTEEEEEEEC-CTTEEEEEECTTSSCEEEEEETTT
T ss_pred EEec-ccCCCCccceEECCCCCEEEEecCCCCcccEEEEECC---CCCeEEEEEC-CCCccceEECCCCCEEEEEecCCC
Confidence 3333 44555555599999999888655553 89999997 4555666554 445689999999866677777778
Q ss_pred C-EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC
Q psy4510 435 Q-IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG 513 (812)
Q Consensus 435 ~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (812)
. |.+|++..... +.... .
T Consensus 151 ~~i~~~~~~~~g~---------------------------------------~~~~~--~-------------------- 169 (331)
T 3u4y_A 151 NTVRRFKIDADGV---------------------------------------LFDTG--Q-------------------- 169 (331)
T ss_dssp TEEEEEEECTTCC---------------------------------------EEEEE--E--------------------
T ss_pred ceEEEEEECCCCc---------------------------------------EeecC--C--------------------
Confidence 8 99999874310 00000 0
Q ss_pred CCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEE
Q psy4510 514 QKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRV 593 (812)
Q Consensus 514 ~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l 593 (812)
...........+
T Consensus 170 --------------------------------------------------------------------~~~~~~~~~~~~ 181 (331)
T 3u4y_A 170 --------------------------------------------------------------------EFISGGTRPFNI 181 (331)
T ss_dssp --------------------------------------------------------------------EEECSSSSEEEE
T ss_pred --------------------------------------------------------------------ccccCCCCccce
Confidence 000001134678
Q ss_pred EEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeE-
Q psy4510 594 RTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVL- 672 (812)
Q Consensus 594 ~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~l- 672 (812)
+|+|+|++++++. ..++.|++||+.++.. ...+..+.. ...+..++|+| ++++|
T Consensus 182 ~~spdg~~l~v~~-~~~~~v~v~d~~~~~~----------------------~~~~~~~~~-~~~~~~~~~sp-dg~~l~ 236 (331)
T 3u4y_A 182 TFTPDGNFAFVAN-LIGNSIGILETQNPEN----------------------ITLLNAVGT-NNLPGTIVVSR-DGSTVY 236 (331)
T ss_dssp EECTTSSEEEEEE-TTTTEEEEEECSSTTS----------------------CEEEEEEEC-SSCCCCEEECT-TSSEEE
T ss_pred EECCCCCEEEEEe-CCCCeEEEEECCCCcc----------------------cceeeeccC-CCCCceEEECC-CCCEEE
Confidence 8999999776653 5689999999987651 001444443 35678899999 67644
Q ss_pred EecCCCceEEEEecCCCceeEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEE
Q psy4510 673 ATGDCKRNIHIWTPREAGAWSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 752 (812)
Q Consensus 673 as~s~Dg~v~iWd~~~~~~~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~ 752 (812)
++...++.|.+||+.+++...+..+.. . +.........+.+++|+|||+++++
T Consensus 237 v~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------~------~~~~~~~~~~~~~~~~spdg~~l~v 289 (331)
T 3u4y_A 237 VLTESTVDVFNFNQLSGTLSFVKSFGH---------------------G------LLIDPRPLFGANQMALNKTETKLFI 289 (331)
T ss_dssp EECSSEEEEEEEETTTTEEEEEEEEEC---------------------C------CCCCCGGGTTCCCEEECTTSSEEEE
T ss_pred EEEcCCCEEEEEECCCCceeeeccccc---------------------c------cccCCCCcccccceEECCCCCEEEE
Confidence 455567889999987765533321110 0 0000111122367999999995456
Q ss_pred eeccCCceEEeeecCcc
Q psy4510 753 SCSVDRSNRIGARRDML 769 (812)
Q Consensus 753 s~s~Dg~i~iWd~~~~~ 769 (812)
++..+++|.|||+....
T Consensus 290 ~~~~~~~v~v~d~~~~~ 306 (331)
T 3u4y_A 290 SANISRELKVFTISGKV 306 (331)
T ss_dssp EETTTTEEEEEETTSCE
T ss_pred ecCCCCcEEEEEecCCc
Confidence 67778899999998766
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.88 E-value=5.8e-21 Score=201.09 Aligned_cols=311 Identities=9% Similarity=0.038 Sum_probs=195.5
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-CceEEeeCC--CCCCCCCCCCCce
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-FQLAEHNKK--RGKGPGIPTPPLF 266 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-~~i~vwd~~--~~~~~~~~~~~~~ 266 (812)
.++++++.++.|++|++...... .......|...+.+++|+|++++|++++.+ +.|.+|++. ++ ..+.+.
T Consensus 6 ~l~~~~~~~~~v~~~~~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~-----~~~~~~ 78 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNHEGAL--TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDG-----ALTFAA 78 (343)
T ss_dssp EEEEEEGGGTEEEEEEECTTSCE--EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTC-----CEEEEE
T ss_pred EEEEeCCCCCeEEEEEECCCCcE--EEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCC-----ceeecc
Confidence 34555588999999999643211 112223577789999999999999988876 999999997 33 123344
Q ss_pred EEcCCCCcEEEEEecCCCCCEEE-EEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 267 SFSGHLTEGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 267 ~~~~h~~~v~~l~~sp~~~~~l~-sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
.+..+. .+..++|+|++ .+|+ ++..++.|.+|++..+.. ......+. ....+.+++|+|+++.+++++..++.|+
T Consensus 79 ~~~~~~-~~~~~~~s~dg-~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 79 ESALPG-SLTHISTDHQG-QFVFVGSYNAGNVSVTRLEDGLP-VGVVDVVE-GLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEECSS-CCSEEEECTTS-SEEEEEETTTTEEEEEEEETTEE-EEEEEEEC-CCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred ccccCC-CCcEEEEcCCC-CEEEEEecCCCeEEEEECCCCcc-cccccccc-CCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 455444 78899999999 5554 445588999999962221 11223333 3346899999999996544444899999
Q ss_pred EEECCCCCccccee--ecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCCc--eEEcc---cC---CCCE
Q psy4510 346 IWDTRVINTKSCML--TLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGSS--VATFK---HH---TAPV 414 (812)
Q Consensus 346 iwd~~~~~~~~~~~--~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~~--~~~~~---~h---~~~v 414 (812)
+||+.......... .........+..++|+|++++++ ++..++.|.+|++... .+.. ...+. .. ...+
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 233 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDP-HGNIECVQTLDMMPENFSDTRWA 233 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCT-TSCCEEEEEEECSCTTCCSCCCE
T ss_pred EEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCcEEEEeeccccCccccccCCc
Confidence 99998522222111 22223445788999999999665 4558899999999631 1111 22222 11 3457
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC-C
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS-G 493 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~-~ 493 (812)
..++|+|++..+++++..++.|.+||+...... ............+..++|+|++..++++...+ .
T Consensus 234 ~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~-------------~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 300 (343)
T 1ri6_A 234 ADIHITPDGRHLYACDRTASLITVFSVSEDGSV-------------LSKEGFQPTETQPRGFNVDHSGKYLIAAGQKSHH 300 (343)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEEECTTSCC-------------EEEEEEEECSSSCCCEEECTTSSEEEEECTTTCE
T ss_pred cceEECCCCCEEEEEecCCCEEEEEEEcCCCCc-------------eEEeeeecCCCccceEEECCCCCEEEEecCCCCe
Confidence 789999998645556667999999999832110 02222222233488999999987677766544 4
Q ss_pred eEEEEeC-CCCCcccEEeecCCCCeeEEEEcCC
Q psy4510 494 FNIFRTI-SDLPSQLLFIHLGQKEIKELHWHPQ 525 (812)
Q Consensus 494 ~~~~~~~-~~~~~~~~~~~~~~~~i~~~~~~p~ 525 (812)
+.+|..- .......+..........+++|.|+
T Consensus 301 v~v~~~d~~~g~~~~~~~~~~g~~p~~i~~~~~ 333 (343)
T 1ri6_A 301 ISVYEIVGEQGLLHEKGRYAVGQGPMWVVVNAH 333 (343)
T ss_dssp EEEEEEETTTTEEEEEEEEECSSSCCEEEEEEE
T ss_pred EEEEEEcCCCceeeEccccccCCCCeeEEEEcc
Confidence 5666432 1222222222222234555666654
No 139
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.87 E-value=2.8e-20 Score=216.55 Aligned_cols=268 Identities=12% Similarity=0.117 Sum_probs=178.4
Q ss_pred EEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCC-----------------CCCeeeeeEcCCCCcEEEee
Q psy4510 180 FAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH-----------------TNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 180 ~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h-----------------~~~V~~l~~s~~~~~l~s~~ 242 (812)
..+.|+ ++.+++++.++ | +||+.+++.. ...+..| ...|.+++|||+ +.++.+
T Consensus 29 ~~~~w~---g~~~~~~~~~~-i-~~d~~tg~~~---~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~- 98 (706)
T 2z3z_A 29 VGLQWM---GDNYVFIEGDD-L-VFNKANGKSA---QTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLF- 98 (706)
T ss_dssp TTCEEE---TTEEEEEETTE-E-EEEC----------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEE-
T ss_pred CCCcCc---CCeEEEEeCCc-E-EEECCCCcEe---eEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEE-
Confidence 335666 56677777777 8 9999988631 0122222 257999999999 666555
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC-----CCcceeccccccC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-----AGAWQVDQKPLVG 317 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~-----~~~~~~~~~~~~~ 317 (812)
.++.+++||+.++ ....+..+...+.+++|||+| ..|+++ .++.|++|++.+ +.. ......
T Consensus 99 ~~~~i~~~d~~~~--------~~~~l~~~~~~~~~~~~SpdG-~~la~~-~~~~i~v~~~~~~~~~~g~~----~~~~~~ 164 (706)
T 2z3z_A 99 TQGGLVGFDMLAR--------KVTYLFDTNEETASLDFSPVG-DRVAYV-RNHNLYIARGGKLGEGMSRA----IAVTID 164 (706)
T ss_dssp ETTEEEEEETTTT--------EEEEEECCTTCCTTCEECTTS-SEEEEE-ETTEEEEEECBCTTSCCCCC----EESCSC
T ss_pred ECCEEEEEECCCC--------ceEEccCCcccccCCcCCCCC-CEEEEE-ECCeEEEEecCcccccCCCc----EEeccC
Confidence 3599999999874 234555677788899999999 677775 579999999987 552 221222
Q ss_pred CCC--------------CEEEEEEcCCCCeEEEEEE---------------------------------CCCeEEEEECC
Q psy4510 318 HTN--------------SVEDLQWSPGEKRVLASCS---------------------------------VDLSIRIWDTR 350 (812)
Q Consensus 318 h~~--------------~v~~~~~~p~~~~~l~s~~---------------------------------~dg~i~iwd~~ 350 (812)
+.. .+.+++|+|+|+. |++++ .+..|++||+.
T Consensus 165 ~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~ 243 (706)
T 2z3z_A 165 GTETLVYGQAVHQREFGIEKGTFWSPKGSC-LAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLA 243 (706)
T ss_dssp CBTTEEESSCCGGGCTTCCCSEEECTTSSE-EEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETT
T ss_pred CCCCeEcccchhhhhcCCCceEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECC
Confidence 222 2589999999995 66666 44689999998
Q ss_pred CCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCCCCCCCceEEcc--cCCC---CEEEEEEc
Q psy4510 351 VINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRRFKKGSSVATFK--HHTA---PVTTVEWH 420 (812)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~~~~~~~~~~~~--~h~~---~v~~v~~~ 420 (812)
++... .......|...+.+++|+|+|+.|++++.++ .|++||+.. +.....+. .+.. .+.++.|+
T Consensus 244 ~~~~~--~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~---g~~~~~~~~~~~~~~~~~~~~~~~s 318 (706)
T 2z3z_A 244 TGKTV--YLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAET---GRFVRTLFVETDKHYVEPLHPLTFL 318 (706)
T ss_dssp TTEEE--ECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTT---CCEEEEEEEEECSSCCCCCSCCEEC
T ss_pred CCceE--eeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCC---CceeeEEEEccCCCeECccCCceee
Confidence 54321 1111135667899999999999888887765 899999974 32232222 2222 34678999
Q ss_pred c--CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE-EEEcCCCCCEEEEEeCCC
Q psy4510 421 P--TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE-LHWHPQLPGTIISTANSG 493 (812)
Q Consensus 421 p--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p~~~~~~~~~~~~~ 493 (812)
| ++ .++++++.|+.+++|.+..... .+.....+...+.. ++|+|++..+++++..++
T Consensus 319 p~~dg-~~l~~~~~~g~~~l~~~~~~~~---------------~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~ 378 (706)
T 2z3z_A 319 PGSNN-QFIWQSRRDGWNHLYLYDTTGR---------------LIRQVTKGEWEVTNFAGFDPKGTRLYFESTEAS 378 (706)
T ss_dssp TTCSS-EEEEEECTTSSCEEEEEETTSC---------------EEEECCCSSSCEEEEEEECTTSSEEEEEESSSC
T ss_pred cCCCC-EEEEEEccCCccEEEEEECCCC---------------EEEecCCCCeEEEeeeEEcCCCCEEEEEecCCC
Confidence 9 87 5888898999999998863211 22233334456766 799999876666665543
No 140
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.87 E-value=5.3e-20 Score=192.75 Aligned_cols=288 Identities=9% Similarity=0.020 Sum_probs=193.3
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CCceEEeeCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PFQLAEHNKKRGKGPGI 260 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~~i~vwd~~~~~~~~~ 260 (812)
+.|.+..+.++++++.++.|++||+.+++ ....+..+...+ +++|+|++++|++++. ++.|.+||..++
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~----- 72 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLE----ILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLE----- 72 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCC----EEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSS-----
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccc----eeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCC-----
Confidence 34556345567888999999999998876 334444555666 9999999997776665 889999999885
Q ss_pred CCCC-ceEEcCCCCcEEEEEecCCCCCEEEEEeCCC---cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 261 PTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 261 ~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg---~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
+. ...+..+.....+++|+|++ .+|+++..++ .|.+||+.++. ....+. +.....+++|+|+++.+++
T Consensus 73 --~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~i~v~d~~~~~----~~~~~~-~~~~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 73 --PPKVVAIQEGQSSMADVDITPDD-QFAVTVTGLNHPFNMQSYSFLKNK----FISTIP-IPYDAVGIAISPNGNGLIL 144 (331)
T ss_dssp --SCEEEEEEECSSCCCCEEECTTS-SEEEECCCSSSSCEEEEEETTTTE----EEEEEE-CCTTEEEEEECTTSSCEEE
T ss_pred --ceeEEecccCCCCccceEECCCC-CEEEEecCCCCcccEEEEECCCCC----eEEEEE-CCCCccceEECCCCCEEEE
Confidence 44 66666666666669999999 6777555543 89999998775 233333 3445799999999997777
Q ss_pred EEECCCe-EEEEECCCCCcccce-eecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCc---eEEcccC
Q psy4510 337 SCSVDLS-IRIWDTRVINTKSCM-LTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSS---VATFKHH 410 (812)
Q Consensus 337 s~~~dg~-i~iwd~~~~~~~~~~-~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~---~~~~~~h 410 (812)
++..++. |.+|++......... ... .........++|+|+|+++ +++..++.|.+||+.. ++. +..+..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~---~~~~~~~~~~~~- 219 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEF-ISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQN---PENITLLNAVGT- 219 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEE-ECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSS---TTSCEEEEEEEC-
T ss_pred EecCCCceEEEEEECCCCcEeecCCcc-ccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCC---CcccceeeeccC-
Confidence 7777788 999998743211111 111 1334568999999999954 5555789999999974 444 666654
Q ss_pred CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 411 TAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+..++|+|++..++++...++.|.+||+.+.+... ....+..+............++|+|++..++++..
T Consensus 220 ~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~ 292 (331)
T 3u4y_A 220 NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSF-------VKSFGHGLLIDPRPLFGANQMALNKTETKLFISAN 292 (331)
T ss_dssp SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEE-------EEEEECCCCCCCGGGTTCCCEEECTTSSEEEEEET
T ss_pred CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceee-------ecccccccccCCCCcccccceEECCCCCEEEEecC
Confidence 35678899999985444555567889999998763210 00000000000000112356899999987777777
Q ss_pred CCCe-EEEEe
Q psy4510 491 NSGF-NIFRT 499 (812)
Q Consensus 491 ~~~~-~~~~~ 499 (812)
.++. .+|+.
T Consensus 293 ~~~~v~v~d~ 302 (331)
T 3u4y_A 293 ISRELKVFTI 302 (331)
T ss_dssp TTTEEEEEET
T ss_pred CCCcEEEEEe
Confidence 6654 45543
No 141
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=9.2e-20 Score=192.81 Aligned_cols=276 Identities=11% Similarity=0.027 Sum_probs=198.3
Q ss_pred CCceEEEEeCCCCCCeEEEecC-------CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCce
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-------KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQL 247 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-------dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i 247 (812)
...+..++|+| ++++|++++. ++.|.+||..+++. ...+.. ...+.+++|+|++++++.+ ..++.|
T Consensus 40 ~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~----~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~~v 113 (353)
T 3vgz_A 40 GKGAYEMAYSQ-QENALWLATSQSRKLDKGGVVYRLDPVTLEV----TQAIHN-DLKPFGATINNTTQTLWFGNTVNSAV 113 (353)
T ss_dssp ESSEEEEEEET-TTTEEEEEECCCTTTEESEEEEEECTTTCCE----EEEEEE-SSCCCSEEEETTTTEEEEEETTTTEE
T ss_pred ccCccceEECC-CCCEEEEEcCCCcCCCCCccEEEEcCCCCeE----EEEEec-CCCcceEEECCCCCEEEEEecCCCEE
Confidence 35678899999 9988887763 56899999988763 222222 3457899999999966554 557999
Q ss_pred EEeeCCCCCCCCCCCCCceEEcCCCC---------cEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceecccccc
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSGHLT---------EGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~h~~---------~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
.+||..++ +.+..+..+.. .+.+++|+|++ +++++++ .++.|.+||+.++. ....+.
T Consensus 114 ~~~d~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~i~~~d~~~~~----~~~~~~ 181 (353)
T 3vgz_A 114 TAIDAKTG-------EVKGRLVLDDRKRTEEVRPLQPRELVADDAT-NTVYISGIGKESVIWVVDGGNIK----LKTAIQ 181 (353)
T ss_dssp EEEETTTC-------CEEEEEESCCCCCCSSCCCCEEEEEEEETTT-TEEEEEEESSSCEEEEEETTTTE----EEEEEC
T ss_pred EEEeCCCC-------eeEEEEecCCCccccccCCCCCceEEECCCC-CEEEEEecCCCceEEEEcCCCCc----eEEEec
Confidence 99999885 55555655432 27899999999 5555544 47899999998776 334444
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEec
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDL 395 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~ 395 (812)
.+...+.+++|+|+++. +++++.++.|.+||+.+......+..-..++...+..++|+|+++++++++ .++.|.+||+
T Consensus 182 ~~~~~~~~~~~s~dg~~-l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 182 NTGKMSTGLALDSEGKR-LYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CCCTTCCCCEEETTTTE-EEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCCCccceEEECCCCCE-EEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 45556889999999994 777788999999999854322221111123566788999999999666555 4599999999
Q ss_pred CCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE
Q psy4510 396 RRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE 475 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 475 (812)
. .++.+..+..... ..++|+|++..++++...++.|.+||+.+. ...........+..
T Consensus 261 ~---~~~~~~~~~~~~~--~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-----------------~~~~~~~~~~~~~~ 318 (353)
T 3vgz_A 261 R---NGNILAKVAAPES--LAVLFNPARNEAYVTHRQAGKVSVIDAKSY-----------------KVVKTFDTPTHPNS 318 (353)
T ss_dssp T---TCCEEEEEECSSC--CCEEEETTTTEEEEEETTTTEEEEEETTTT-----------------EEEEEEECCSEEEE
T ss_pred C---CCcEEEEEEcCCC--ceEEECCCCCEEEEEECCCCeEEEEECCCC-----------------eEEEEEecCCCCCe
Confidence 7 4556666654332 579999998655566657899999999877 33333333457899
Q ss_pred EEEcCCCCCEEEEEeCC
Q psy4510 476 LHWHPQLPGTIISTANS 492 (812)
Q Consensus 476 ~~~~p~~~~~~~~~~~~ 492 (812)
++|+|++..++++...+
T Consensus 319 ~~~s~dg~~l~v~~~~~ 335 (353)
T 3vgz_A 319 LALSADGKTLYVSVKQK 335 (353)
T ss_dssp EEECTTSCEEEEEEECC
T ss_pred EEEcCCCCEEEEEEccc
Confidence 99999987777776553
No 142
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=1e-20 Score=194.37 Aligned_cols=239 Identities=13% Similarity=0.059 Sum_probs=176.8
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCC-CCcccccccccCCC-CCCeeeeeEcCCCCcEEEee--CCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLGGH-TNSAEDLQWSDLKTALQTVD--DPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~-~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~l~s~~--~d~~i~v 249 (812)
+|...|.+++|+| ++++||+++ ++.|++||+.+ ++ .......| ...|.+++|+|++++|++++ .++..+|
T Consensus 39 ~~~~~v~~~~~sp-dg~~l~~~~-~~~i~~~d~~~~~~----~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l 112 (297)
T 2ojh_A 39 QTPELFEAPNWSP-DGKYLLLNS-EGLLYRLSLAGDPS----PEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAI 112 (297)
T ss_dssp EESSCCEEEEECT-TSSEEEEEE-TTEEEEEESSSCCS----CEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEE
T ss_pred cCCcceEeeEECC-CCCEEEEEc-CCeEEEEeCCCCCC----ceEeccccccccccceEECCCCCEEEEEEeCCCCcceE
Confidence 5778899999999 999999987 78999999988 65 33344455 47899999999999999998 4456666
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
|.+... ......+..+. .+..++|+|++..++++++.++.++||++..... ....+..+...+.+++|+|
T Consensus 113 ~~~~~~------~~~~~~~~~~~-~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~s~ 182 (297)
T 2ojh_A 113 YLLPST------GGTPRLMTKNL-PSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSG---VETRLTHGEGRNDGPDYSP 182 (297)
T ss_dssp EEEETT------CCCCEECCSSS-SEEEEEECTTSSEEEEEEEETTEEEEEEEETTTC---CEEECCCSSSCEEEEEECT
T ss_pred EEEECC------CCceEEeecCC-CccceEECCCCCEEEEEECCCCceEEEEEECCCC---cceEcccCCCccccceECC
Confidence 665432 13344444443 4899999999944455888899999999653321 2345666788999999999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----------CcEEEEecCCC
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----------GCIHVWDLRRF 398 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----------g~i~iwd~~~~ 398 (812)
+++.+++++..++.+++|+++.. ...+..+ ..|...+.+++|+|++++|++++.+ +.|.+||+...
T Consensus 183 dg~~l~~~~~~~~~~~i~~~~~~--~~~~~~~-~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 259 (297)
T 2ojh_A 183 DGRWIYFNSSRTGQMQIWRVRVD--GSSVERI-TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGG 259 (297)
T ss_dssp TSSEEEEEECTTSSCEEEEEETT--SSCEEEC-CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSC
T ss_pred CCCEEEEEecCCCCccEEEECCC--CCCcEEE-ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCC
Confidence 99965555556999999998632 2233444 5677789999999999988887765 56999999742
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
+ ...+..+..|...+.+++|+|++. .|++++.+
T Consensus 260 ~-~~~~~~~~~~~~~~~~~~~spdg~-~l~~~~~~ 292 (297)
T 2ojh_A 260 N-VETLFDLFGGQGTMNSPNWSPDGD-EFAYVRYF 292 (297)
T ss_dssp S-CEEEEEEEESTTTSCSCCBCTTSS-EEEEEEEC
T ss_pred C-ceeeeccCCCCcccccceECCCCC-EEEEEEec
Confidence 1 223455557888999999999985 66665544
No 143
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.86 E-value=6.3e-20 Score=193.16 Aligned_cols=258 Identities=10% Similarity=0.062 Sum_probs=175.0
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCC-CcEEEEccC--CCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCK-RNIHIWTPR--EAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~d-g~v~iwd~~--~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~v 249 (812)
.|...+.+++|+| ++++|++++.+ +.|++|++. ++.. .....+..+. .+.+++|+|++++|++++ .++.|.+
T Consensus 35 ~~~~~~~~~~~sp-dg~~l~~~~~~~~~v~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~ 110 (343)
T 1ri6_A 35 DVPGQVQPMVVSP-DKRYLYVGVRPEFRVLAYRIAPDDGAL--TFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSV 110 (343)
T ss_dssp ECSSCCCCEEECT-TSSEEEEEETTTTEEEEEEECTTTCCE--EEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEE
T ss_pred ecCCCCceEEECC-CCCEEEEeecCCCeEEEEEecCCCCce--eeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEE
Confidence 4556788899999 99988888776 999999997 3331 1222333333 889999999999887766 4888999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceecc--ccccCCCCCEEEEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQ 326 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~--~~~~~h~~~v~~~~ 326 (812)
|++..+. ....+..+..+ ..+.+++|+|++ ..|++++ .++.|++|++.+........ .........+.+++
T Consensus 111 ~d~~~~~----~~~~~~~~~~~-~~~~~~~~s~dg-~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (343)
T 1ri6_A 111 TRLEDGL----PVGVVDVVEGL-DGCHSANISPDN-RTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMV 184 (343)
T ss_dssp EEEETTE----EEEEEEEECCC-TTBCCCEECTTS-SEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEE
T ss_pred EECCCCc----cccccccccCC-CCceEEEECCCC-CEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEE
Confidence 9995220 11334444443 458899999999 5666665 88999999998733211111 11122345788999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcc----cceeecCCcC--CCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCC
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLPNAH--TSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~~~~--~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~ 399 (812)
|+|+++.+++++..++.|++|++...... .....+...+ ...+..++|+|++++|+ ++..++.|.+||+....
T Consensus 185 ~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~ 264 (343)
T 1ri6_A 185 FHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDG 264 (343)
T ss_dssp ECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTS
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCC
Confidence 99999976666668999999999632111 1111121121 34677899999998666 55578999999997311
Q ss_pred -CCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCC
Q psy4510 400 -KGSSVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAV 443 (812)
Q Consensus 400 -~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~ 443 (812)
..+.+..+..+.. +.+++|+|++. +|++++ .++.|.+|++..
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~s~dg~-~l~~~~~~~~~v~v~~~d~ 308 (343)
T 1ri6_A 265 SVLSKEGFQPTETQ-PRGFNVDHSGK-YLIAAGQKSHHISVYEIVG 308 (343)
T ss_dssp CCEEEEEEEECSSS-CCCEEECTTSS-EEEEECTTTCEEEEEEEET
T ss_pred CceEEeeeecCCCc-cceEEECCCCC-EEEEecCCCCeEEEEEEcC
Confidence 1234444544444 88999999974 566655 689999996653
No 144
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.85 E-value=3.1e-20 Score=200.91 Aligned_cols=258 Identities=14% Similarity=0.121 Sum_probs=174.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-----------cccccccCCCCCCeeeeeEcCCCCcEE----Ee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-----------QVDQKPLGGHTNSAEDLQWSDLKTALQ----TV 241 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-----------~~~~~~l~~h~~~V~~l~~s~~~~~l~----s~ 241 (812)
..+..+++++ ++.+|++|+.++ |+||+....... .........|...|++++|+|++++|+ ++
T Consensus 37 ~~~n~lavs~-~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~sg 114 (434)
T 2oit_A 37 ERSSLLAVSN-KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMMSS 114 (434)
T ss_dssp SCCBCEEEET-TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEEET
T ss_pred CCccEEEEec-CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEecc
Confidence 4578899999 999999999887 999875421100 000011124567899999999999999 78
Q ss_pred eCCCceEEeeCCCCCCCC-CCCCC---ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 242 DDPFQLAEHNKKRGKGPG-IPTPP---LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~-~~~~~---~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
+.|+.|++||+.++.... ...++ +..+.+|...|.+++|+|+...+|++|+.||+|++||++++. ......+
T Consensus 115 s~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~~----~~~~~~~ 190 (434)
T 2oit_A 115 EYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTETV----KVCATLP 190 (434)
T ss_dssp TTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSSE----EEEEEEC
T ss_pred CCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCCc----ceeeccC
Confidence 899999999986531000 01122 355677999999999999855899999999999999998874 3344566
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec---CCcCCCCeEEEEEcCCCCEEEE-EeCCCc----
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL---PNAHTSDVNVISWNRTEPLIVS-GGDDGC---- 389 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---~~~~~~~v~~l~~~~~~~~l~s-g~~dg~---- 389 (812)
|...|.+++|+|+++ +|++|+.||.|++||++ +.....+... ...|...|.+++|++++.++++ +..+|.
T Consensus 191 ~~~~v~~v~wspdg~-~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~ 268 (434)
T 2oit_A 191 STVAVTSVCWSPKGK-QLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETS 268 (434)
T ss_dssp GGGCEEEEEECTTSS-CEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSC
T ss_pred CCCceeEEEEcCCCC-EEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCC
Confidence 889999999999998 59999999999999998 2221111111 0123448999999998876544 334433
Q ss_pred --EEEEecCCCCCC--CceEEcc-------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 390 --IHVWDLRRFKKG--SSVATFK-------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 390 --i~iwd~~~~~~~--~~~~~~~-------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
+++|++++.+.. .....+. +...+-..+.+.++...++++.+..+.|.+....
T Consensus 269 ~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 269 PDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHYYLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp CEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCEEEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred CceEEEEeccCCCCCCcceEecccCCCCCCCCcCcceeeehhccCCEEEEecCCCCceeEEEec
Confidence 899999863221 1112221 2222333444446654445555556667777654
No 145
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.85 E-value=9.9e-20 Score=192.11 Aligned_cols=258 Identities=9% Similarity=0.042 Sum_probs=176.4
Q ss_pred CCCceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEee
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHN 251 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd 251 (812)
+...+..++|+| +|++++++. .++.|++|++.++.. .....+..+...+..++|+|+|++|++++ .++.+.+|+
T Consensus 38 ~~~~p~~~a~sp-dg~l~~~~~~~~~~~v~~~~~~~g~~--~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~ 114 (347)
T 3hfq_A 38 ATQNPTYLALSA-KDCLYSVDKEDDEGGIAAWQIDGQTA--HKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMK 114 (347)
T ss_dssp ECSCCCCEEECT-TCEEEEEEEETTEEEEEEEEEETTEE--EEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred ccCCcceEEEcc-CCeEEEEEecCCCceEEEEEecCCcE--EEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEE
Confidence 445567799999 998444443 268999999965542 12333455778899999999999998888 789999999
Q ss_pred CCCCCCCCCCCCCceEEcC---------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSG---------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNS 321 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~---------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~ 321 (812)
+.... ....+..+.. +...+.+++|+|++. +++++..++.|++|++...+.... ...+.. ....
T Consensus 115 ~~~~g----~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~v~~~~~~~~g~~~~-~~~~~~~~g~~ 188 (347)
T 3hfq_A 115 IAADG----ALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDKVYVYNVSDAGQLSE-QSVLTMEAGFG 188 (347)
T ss_dssp ECTTS----CEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTEEEEEEECTTSCEEE-EEEEECCTTCC
T ss_pred eCCCC----CeeecceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCEEEEEEECCCCcEEE-eeeEEcCCCCC
Confidence 96421 1122233321 223588999999995 777777789999999984332111 111122 2336
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCC-cccceeecCCcC------CCCeEEEEEcCCCCEE-EEEeCCCcEEEE
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN-TKSCMLTLPNAH------TSDVNVISWNRTEPLI-VSGGDDGCIHVW 393 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-~~~~~~~~~~~~------~~~v~~l~~~~~~~~l-~sg~~dg~i~iw 393 (812)
+..++|+|+++.+++++..++.|++|++.... ....+..+ ... ...+..++|+|+|++| +++..++.|.+|
T Consensus 189 p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~ 267 (347)
T 3hfq_A 189 PRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIV-KTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVF 267 (347)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEE-ESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEE
T ss_pred CceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeee-eecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEE
Confidence 78899999999767777788999999987421 11111222 111 1458899999999966 566678999999
Q ss_pred ecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC-CCCEEEEEcCC
Q psy4510 394 DLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA-DDQIALWDLAV 443 (812)
Q Consensus 394 d~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~-dg~v~iwd~~~ 443 (812)
++........+..+..+...+..++|+|++. +|++++. ++.|.+|++..
T Consensus 268 ~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~-~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 268 AVTADGHLTLIQQISTEGDFPRDFDLDPTEA-FVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp EECGGGCEEEEEEEECSSSCCCEEEECTTSS-EEEEEETTTTEEEEEEECT
T ss_pred EECCCCcEEEeEEEecCCCCcCeEEECCCCC-EEEEEEcCCCcEEEEEEeC
Confidence 9974222245556666667789999999984 6666665 58999996653
No 146
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.85 E-value=6.5e-20 Score=213.88 Aligned_cols=191 Identities=13% Similarity=0.094 Sum_probs=133.2
Q ss_pred eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCC---cEEEEEecCCCCCEEEEEeC---------C
Q psy4510 227 EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLT---EGFAMDWSSTEPGVLATGDC---------K 294 (812)
Q Consensus 227 ~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~---~v~~l~~sp~~~~~l~sg~~---------d 294 (812)
..++|+|+++++++ +.++.|++|++.++ ++...+.+|.. .+.+++|||+| .+|++++. +
T Consensus 19 ~~~~~s~dg~~~~~-~~d~~i~~~~~~~g-------~~~~~~~~~~~~~~~~~~~~~SpDg-~~la~~~~~~~~~~~s~~ 89 (719)
T 1z68_A 19 FFPNWISGQEYLHQ-SADNNIVLYNIETG-------QSYTILSNRTMKSVNASNYGLSPDR-QFVYLESDYSKLWRYSYT 89 (719)
T ss_dssp CCCEESSSSEEEEE-CTTSCEEEEESSSC-------CEEEEECHHHHHTTTCSEEEECTTS-SEEEEEEEEEECSSSCEE
T ss_pred CccEECCCCeEEEE-cCCCCEEEEEcCCC-------cEEEEEccccccccceeeEEECCCC-CeEEEEecCceeEEeecc
Confidence 37899999965554 46999999999885 44455554443 38899999999 77777765 6
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCe-----
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDV----- 369 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v----- 369 (812)
+.|++||+.++... ....+ ...+..++|+|+|+. |+.++ ++.|++|++.++.. ......++...|
T Consensus 90 ~~i~~~d~~~g~~~--~~~~l---~~~~~~~~~SPDG~~-la~~~-~~~i~~~~~~~g~~---~~l~~~~~~~~v~~g~~ 159 (719)
T 1z68_A 90 ATYYIYDLSNGEFV--RGNEL---PRPIQYLCWSPVGSK-LAYVY-QNNIYLKQRPGDPP---FQITFNGRENKIFNGIP 159 (719)
T ss_dssp EEEEEEETTTTEEC--CSSCC---CSSBCCEEECSSTTC-EEEEE-TTEEEEESSTTSCC---EECCCCCBTTTEEESSC
T ss_pred eEEEEEECCCCccc--cceec---CcccccceECCCCCE-EEEEE-CCeEEEEeCCCCCc---EEEecCCCcCCeEcccc
Confidence 89999999887520 00222 246889999999995 66665 78999999975432 221112332222
Q ss_pred ------------EEEEEcCCCCEEEEEeCCC----------------------------------cEEEEecCCCCCCCc
Q psy4510 370 ------------NVISWNRTEPLIVSGGDDG----------------------------------CIHVWDLRRFKKGSS 403 (812)
Q Consensus 370 ------------~~l~~~~~~~~l~sg~~dg----------------------------------~i~iwd~~~~~~~~~ 403 (812)
.+++|+|+|++|++++.|. .|++||+.. +..
T Consensus 160 ~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~---~~~ 236 (719)
T 1z68_A 160 DWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTY---PAY 236 (719)
T ss_dssp CHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSC---HHH
T ss_pred cceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCC---CCc
Confidence 4899999999999887552 788999874 222
Q ss_pred e--------EEcccCCCCEEEEEEccCCCcEEEEEECCC----CEEEEE
Q psy4510 404 V--------ATFKHHTAPVTTVEWHPTESSTFASGGADD----QIALWD 440 (812)
Q Consensus 404 ~--------~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg----~v~iwd 440 (812)
. ..+.+|...+.+++|+|++ +++++....+ .|.+||
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~SpD~-~~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 237 VGPQEVPVPAMIASSDYYFSWLTWVTDE-RVCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp HCCEECCCCHHHHTSCEEEEEEEESSSS-EEEEEEEESSTTEEEEEEEE
T ss_pred cceeEccCCccCCCCcceEEEeEEeCCC-eEEEEEeccccCeEEEEEEc
Confidence 1 1234688889999999995 5666644322 377777
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.85 E-value=2e-19 Score=209.29 Aligned_cols=275 Identities=11% Similarity=0.107 Sum_probs=193.5
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC-
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR- 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~- 254 (812)
...|.+++||| + +.++.+. ++.|++||+.+++ ...+..+...+.+++|||+|++|+++ .++.|++|++.+
T Consensus 81 ~~~v~~~~~sp-d-~~~~~~~-~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~ 151 (706)
T 2z3z_A 81 AFPSFRTLDAG-R-GLVVLFT-QGGLVGFDMLARK-----VTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKL 151 (706)
T ss_dssp -CCCEEEEETT-T-TEEEEEE-TTEEEEEETTTTE-----EEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCT
T ss_pred ccCceeEEECC-C-CeEEEEE-CCEEEEEECCCCc-----eEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcc
Confidence 35699999999 7 5555443 5899999998764 23445567789999999999999985 679999999987
Q ss_pred ----CCCCCCCCCCceEEcCCCCc--------------EEEEEecCCCCCEEEEEe------------------------
Q psy4510 255 ----GKGPGIPTPPLFSFSGHLTE--------------GFAMDWSSTEPGVLATGD------------------------ 292 (812)
Q Consensus 255 ----~~~~~~~~~~~~~~~~h~~~--------------v~~l~~sp~~~~~l~sg~------------------------ 292 (812)
+ +.......+... +.+++|||++ .+|++++
T Consensus 152 ~~~~g-------~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg-~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~ 223 (706)
T 2z3z_A 152 GEGMS-------RAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKG-SCLAFYRMDQSMVKPTPIVDYHPLEAESKPL 223 (706)
T ss_dssp TSCCC-------CCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTS-SEEEEEEEECTTSCCEEEEECCSSSCEEEEE
T ss_pred cccCC-------CcEEeccCCCCCeEcccchhhhhcCCCceEEECCCC-CEEEEEEECCCCCceEEeeccCCCCCceEEe
Confidence 5 233222333332 4789999999 7787776
Q ss_pred ---------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-----eEEEEECCCCCcccce
Q psy4510 293 ---------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-----SIRIWDTRVINTKSCM 358 (812)
Q Consensus 293 ---------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-----~i~iwd~~~~~~~~~~ 358 (812)
.+..|++||+.++... .......|...+.+++|+|+++. |++++.++ .|++||+.++.....+
T Consensus 224 ~y~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 224 YYPMAGTPSHHVTVGIYHLATGKTV--YLQTGEPKEKFLTNLSWSPDENI-LYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp CCCBTTSCCCEEEEEEEETTTTEEE--ECCCCSCTTCEEEEEEECTTSSE-EEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred eCCCCCCCCCeeEEEEEECCCCceE--eeccCCCCceeEeeEEEECCCCE-EEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 4467999999876521 11112256778999999999995 67766665 9999999864221112
Q ss_pred eecCCcCCC---CeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE-EEEccCCCcEEEEEEC
Q psy4510 359 LTLPNAHTS---DVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHPTESSTFASGGA 432 (812)
Q Consensus 359 ~~~~~~~~~---~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~l~s~~~ 432 (812)
.. ..+.. .+.+++|+| +|+++++++.+|.++||.+.. .+..+..+..|...+.+ +.|+|++..++++++.
T Consensus 301 ~~--~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~--~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~ 376 (706)
T 2z3z_A 301 FV--ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDT--TGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTE 376 (706)
T ss_dssp EE--EECSSCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEET--TSCEEEECCCSSSCEEEEEEECTTSSEEEEEESS
T ss_pred EE--ccCCCeECccCCceeecCCCCEEEEEEccCCccEEEEEEC--CCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecC
Confidence 11 12222 346789999 999999999999999998863 35667778888888887 7999998655555555
Q ss_pred CC----CEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCC
Q psy4510 433 DD----QIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 433 dg----~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~ 492 (812)
++ .|..||+..... ... .....+..++|+|++..++++....
T Consensus 377 ~~~~~~~l~~~d~~~~~~-----------------~~l-~~~~~~~~~~~spdg~~l~~~~~~~ 422 (706)
T 2z3z_A 377 ASPLERHFYCIDIKGGKT-----------------KDL-TPESGMHRTQLSPDGSAIIDIFQSP 422 (706)
T ss_dssp SCTTCBEEEEEETTCCCC-----------------EES-CCSSSEEEEEECTTSSEEEEEEECS
T ss_pred CCCceEEEEEEEcCCCCc-----------------eec-cCCCceEEEEECCCCCEEEEEecCC
Confidence 55 566666655421 111 1234688999999987776665554
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.84 E-value=7.6e-19 Score=189.99 Aligned_cols=210 Identities=15% Similarity=0.079 Sum_probs=153.9
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC----C-----CCCCCceEEcCCCCcEEEEEecCCCCCEEE----
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP----G-----IPTPPLFSFSGHLTEGFAMDWSSTEPGVLA---- 289 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~----~-----~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~---- 289 (812)
...+..+++++++.++++++.++ +++|+....... . ....+... ..|...|.+++|+|++ .+|+
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~spdg-~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLL-VPMKFPIHHLALSCDN-LTLSACMM 112 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEE-ECCSSCEEEEEECTTS-CEEEEEEE
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCcccc-ccCCCcccEEEEcCCC-CEEEEEEe
Confidence 34688999999999999998888 888775321000 0 00011112 2356789999999999 6777
Q ss_pred EEeCCCcEEEEeCCCC-----Cc--ceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC
Q psy4510 290 TGDCKRNIHIWTPREA-----GA--WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP 362 (812)
Q Consensus 290 sg~~dg~i~vwd~~~~-----~~--~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~ 362 (812)
+|+.|+.|+|||+.+. .. .......+.+|...|.+++|+|++..+|++++.||+|++||+++. ..+...
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~~---~~~~~~- 188 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTET---VKVCAT- 188 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESSS---EEEEEE-
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCCC---cceeec-
Confidence 7888999999998654 10 001135567899999999999985558999999999999999854 333333
Q ss_pred CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-------CCCEEEEEEccCCCcEEE-EEECCC
Q psy4510 363 NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------TAPVTTVEWHPTESSTFA-SGGADD 434 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------~~~v~~v~~~p~~~~~l~-s~~~dg 434 (812)
..|...|++++|+|+|++|++|+.||.|++||++ +.....+..| ...|.+++|++++ .+++ .+..+|
T Consensus 189 ~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~----~~~~~~~~~~~~~~~~~~~~v~~v~w~~~~-~~l~~~~~~dg 263 (434)
T 2oit_A 189 LPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT----LQEKKVIPCPPFYESDHPVRVLDVLWIGTY-VFAIVYAAADG 263 (434)
T ss_dssp ECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT----CCEEEEECCCTTCCTTSCEEEEEEEEEETT-EEEEEEEETTC
T ss_pred cCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC----CcccccccCCcccCCCCceeEEEEEEecCc-eEEEEEccCCC
Confidence 4688899999999999999999999999999997 2333444333 3389999999976 3443 344454
Q ss_pred C------EEEEEcCCC
Q psy4510 435 Q------IALWDLAVE 444 (812)
Q Consensus 435 ~------v~iwd~~~~ 444 (812)
. +++|++...
T Consensus 264 ~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 264 TLETSPDVVMALLPKK 279 (434)
T ss_dssp CSSSCCEEEEEECCCT
T ss_pred ccCCCCceEEEEeccC
Confidence 3 899999865
No 149
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.83 E-value=6.8e-19 Score=205.55 Aligned_cols=281 Identities=10% Similarity=0.043 Sum_probs=187.0
Q ss_pred ceEEEEeCCCCCCeEEEecCC---------CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE
Q psy4510 178 EGFAMDWSSTEPGVLATGDCK---------RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA 248 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~d---------g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~ 248 (812)
.|.+++||| +|++||+++.+ +.|++||+.+++. ..+....+|...+.+++|||+|++|+.++. +.|+
T Consensus 62 ~v~~~~~Sp-Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~ 137 (723)
T 1xfd_A 62 RAIRYEISP-DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP--QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIY 137 (723)
T ss_dssp TCSEEEECT-TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC--EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEE
T ss_pred ccceEEECC-CCCEEEEEecCccceeecceeeEEEEECCCCce--EeccCCccccccccccEECCCCCEEEEEEC-CeEE
Confidence 588999999 99999998764 7888999988763 123344567777999999999999999886 7899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCc------------------EEEEEecCCCCCEEEEEeCCC---------------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTE------------------GFAMDWSSTEPGVLATGDCKR--------------- 295 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~------------------v~~l~~sp~~~~~l~sg~~dg--------------- 295 (812)
+|++.++ ........+... +.+++|||+| ..|++++.++
T Consensus 138 ~~~~~~g-------~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg-~~la~~~~~~~~~~~~~~~~~~~~~ 209 (723)
T 1xfd_A 138 YCAHVGK-------QAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDG-TRLAYAAINDSRVPIMELPTYTGSI 209 (723)
T ss_dssp EESSSSS-------CCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTS-SEEEEEEEECTTSCEEEECCCSSSS
T ss_pred EEECCCC-------ceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCC-CEEEEEEECCCccceEEeeccCCcC
Confidence 9999875 344444443332 2789999999 6777776543
Q ss_pred -------------------cEEEEeCCCCCcceeccccccC------CCCCEEEEEEcCCCCeEEEEEEC----CCeEEE
Q psy4510 296 -------------------NIHIWTPREAGAWQVDQKPLVG------HTNSVEDLQWSPGEKRVLASCSV----DLSIRI 346 (812)
Q Consensus 296 -------------------~i~vwd~~~~~~~~~~~~~~~~------h~~~v~~~~~~p~~~~~l~s~~~----dg~i~i 346 (812)
.|++||+.++.. ...+.. +...+..++|+|+|+ ++++.+. +..|++
T Consensus 210 ~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~----~~~l~~~~~~~~~~~~~~~~~~SpDg~-~l~~~~~~~~~~~~i~~ 284 (723)
T 1xfd_A 210 YPTVKPYHYPKAGSENPSISLHVIGLNGPTH----DLEMMPPDDPRMREYYITMVKWATSTK-VAVTWLNRAQNVSILTL 284 (723)
T ss_dssp SCCCEEEECCBTTSCCCEEEEEEEESSSSCC----CEECCCCCCGGGSSEEEEEEEESSSSE-EEEEEEETTSCEEEEEE
T ss_pred CCcceeccCCCCCCCCCeeEEEEEECCCCce----eEEeeCCccCCCccceeEEEEEeCCCe-EEEEEEcCCCCeEEEEE
Confidence 799999987762 222332 367899999999998 4655543 357999
Q ss_pred EECCCCCcccceeecCCcCCCCeE----EEEEcCCCCEEEE--EeCCC------cEEEEecCCCCCCC--ceEEcccCCC
Q psy4510 347 WDTRVINTKSCMLTLPNAHTSDVN----VISWNRTEPLIVS--GGDDG------CIHVWDLRRFKKGS--SVATFKHHTA 412 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~~~~~v~----~l~~~~~~~~l~s--g~~dg------~i~iwd~~~~~~~~--~~~~~~~h~~ 412 (812)
||+.++. +...+...+...+. .++|+|+|+.|+. +..++ .|.+||+.. .+. ....+..+..
T Consensus 285 ~d~~~g~---~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~--~~~~~~~~~l~~~~~ 359 (723)
T 1xfd_A 285 CDATTGV---CTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQP--NSSNDNIQSITSGDW 359 (723)
T ss_dssp EETTTCC---EEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSC--CSSSCCCCBSCCSSS
T ss_pred EeCCCCc---ceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccC--CCCccceeEeecCCe
Confidence 9998543 22222123334443 7899999995553 55677 566777322 222 1344444444
Q ss_pred CEEE-EEEccCCCcEEEEE-ECC--CCEEEEEcCCCCchhHHHhhhhhccCCCceEEe-ecCCCceeEEEEcCCCCCEEE
Q psy4510 413 PVTT-VEWHPTESSTFASG-GAD--DQIALWDLAVERDSEIEQREAELKDLPSQLLFI-HLGQKEIKELHWHPQLPGTII 487 (812)
Q Consensus 413 ~v~~-v~~~p~~~~~l~s~-~~d--g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~ 487 (812)
.+.. ++|+|++. .|+.. ..+ +.+++|++....... . ..+.. ..+...+..++|+|++..+++
T Consensus 360 ~~~~~~~~spdg~-~l~~~~~~~~~~~~~l~~~~~~~~~~-------~-----~~l~~~~~~~~~~~~~~~spdg~~l~~ 426 (723)
T 1xfd_A 360 DVTKILAYDEKGN-KIYFLSTEDLPRRRQLYSANTVGNFN-------R-----QCLSCDLVENCTYFSASFSHSMDFFLL 426 (723)
T ss_dssp CEEEEEEEETTTT-EEEEEESSSCTTCCEEEEECSSTTCC-------C-----BCSSTTSSSSCCCCEEEECTTSSEEEE
T ss_pred EEEeeeEEcCCCC-EEEEEEcCCCCcceEEEEEeCCCCCC-------c-----ceecccccCCCCeEEEEECCCCCEEEE
Confidence 5555 69999985 55544 444 789999987542100 0 00000 002345789999999877766
Q ss_pred EEeCCC
Q psy4510 488 STANSG 493 (812)
Q Consensus 488 ~~~~~~ 493 (812)
......
T Consensus 427 ~~~~~~ 432 (723)
T 1xfd_A 427 KCEGPG 432 (723)
T ss_dssp ECCSSS
T ss_pred EccCCC
Confidence 655443
No 150
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.82 E-value=3.6e-19 Score=201.96 Aligned_cols=261 Identities=10% Similarity=0.021 Sum_probs=186.5
Q ss_pred CCceEEEEeCCCCCCeEEEecC-CCcEEEEccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeC---CCceEEe
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDD---PFQLAEH 250 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~-dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~---d~~i~vw 250 (812)
..+|++++|+| ||+.||+++. ||+++||++.++. .+.+..|. ..|.+++|||+ +.+++++. +...++|
T Consensus 21 ~~~~~~~~~~~-DG~~la~~s~~~g~~~lw~~~~g~-----~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~ 93 (582)
T 3o4h_A 21 AVEKYSLQGVV-DGDKLLVVGFSEGSVNAYLYDGGE-----TVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALF 93 (582)
T ss_dssp HSCEEEEEEEE-TTTEEEEEEEETTEEEEEEEETTE-----EEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEE
T ss_pred ccchheeecCC-CCCeEEEEEccCCceeEEEEcCCC-----cEeeecccccccccccCCCC-eEEEEeccCCCCcceEEE
Confidence 46799999999 9999999876 9999999985543 23444555 68999999999 77777765 4556676
Q ss_pred eCCC--CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 251 NKKR--GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 251 d~~~--~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
.+.. .. ... .+..+. .+...+|+|++..++++.+.++.+.+||+.++.. ..+..+.. .+++|+
T Consensus 94 ~~~~~~~g------~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----~~l~~~~~--~~~~~s 158 (582)
T 3o4h_A 94 KVNTSRPG------EEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----RELARLPG--FGFVSD 158 (582)
T ss_dssp EEETTSTT------CCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----EEEEEESS--CEEEEE
T ss_pred EEeccCCC------ccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----EEeecCCC--ceEEEC
Confidence 6543 20 111 333222 2346688998866655555556667999987752 22222333 899999
Q ss_pred CCCCeEEEEEECC----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEecCCCCCCC
Q psy4510 329 PGEKRVLASCSVD----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG--CIHVWDLRRFKKGS 402 (812)
Q Consensus 329 p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~ 402 (812)
|+|+ .|++++.+ +.|++||+.++. ...+ ..|...+..++|+|+|+.|+++..+| .|++||+. .+.
T Consensus 159 pDG~-~la~~~~~~~~~~~i~~~d~~~g~----~~~l-~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~---~~~ 229 (582)
T 3o4h_A 159 IRGD-LIAGLGFFGGGRVSLFTSNLSSGG----LRVF-DSGEGSFSSASISPGMKVTAGLETAREARLVTVDPR---DGS 229 (582)
T ss_dssp EETT-EEEEEEEEETTEEEEEEEETTTCC----CEEE-CCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTT---TCC
T ss_pred CCCC-EEEEEEEcCCCCeEEEEEcCCCCC----ceEe-ecCCCccccceECCCCCEEEEccCCCeeEEEEEcCC---CCc
Confidence 9999 57777766 789999987543 2344 56778899999999999999888888 89999997 344
Q ss_pred ceEEcccCCCCEEEEE--------EccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 403 SVATFKHHTAPVTTVE--------WHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~--------~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
.. .+..|...+..+. |+|++ .++++++.++++++|++ ++ ... .....+.
T Consensus 230 ~~-~~~~~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~g~~~l~~~--g~-----------------~~~--~~~~~v~ 286 (582)
T 3o4h_A 230 VE-DLELPSKDFSSYRPTAITWLGYLPDG-RLAVVARREGRSAVFID--GE-----------------RVE--APQGNHG 286 (582)
T ss_dssp EE-ECCCSCSHHHHHCCSEEEEEEECTTS-CEEEEEEETTEEEEEET--TE-----------------EEC--CCSSEEE
T ss_pred EE-EccCCCcChhhhhhccccceeEcCCC-cEEEEEEcCCcEEEEEE--CC-----------------eec--cCCCceE
Confidence 44 6777777777777 99998 89999999999999999 32 111 1124678
Q ss_pred EEEEcCCCCCEEEEEeCC
Q psy4510 475 ELHWHPQLPGTIISTANS 492 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~ 492 (812)
+++|+ ++. ++++.+.+
T Consensus 287 ~~~~s-dg~-~l~~~s~~ 302 (582)
T 3o4h_A 287 RVVLW-RGK-LVTSHTSL 302 (582)
T ss_dssp EEEEE-TTE-EEEEEEET
T ss_pred EEEec-CCE-EEEEEcCC
Confidence 89999 654 44444433
No 151
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.82 E-value=6.1e-18 Score=179.41 Aligned_cols=294 Identities=7% Similarity=-0.005 Sum_probs=189.2
Q ss_pred ceEEEEeecCCCCCCCCeEEEEEecCCCCCCCCCCcccccCCCCccchhhhcccCCCCCCCCCCCccCcCCCCCceEEEE
Q psy4510 104 QTLYAVAGTQSKKFNFNRLIVMKMSNLTSTEEDNERELEDDENDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD 183 (812)
Q Consensus 104 ~~~~~~~gt~~~~~~~n~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~~gh~~~i~~~~ 183 (812)
-..++++||.+... .+.|.+..+..- ...+ ..+... +...+..++
T Consensus 12 ~~~~~~vg~y~~~~-~~~i~~~~~d~~------------------------------~g~~--~~~~~~--~~~~p~~l~ 56 (361)
T 3scy_A 12 SELTMLVGTYTSGN-SKGIYTFRFNEE------------------------------TGES--LPLSDA--EVANPSYLI 56 (361)
T ss_dssp GEEEEEEEECCSSS-CCEEEEEEEETT------------------------------TCCE--EEEEEE--ECSCCCSEE
T ss_pred CceEEEEEeccCCC-CCCEEEEEEeCC------------------------------CCCE--EEeecc--cCCCCceEE
Confidence 34678999998764 478888876310 0011 111111 445667799
Q ss_pred eCCCCCCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCC
Q psy4510 184 WSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGP 258 (812)
Q Consensus 184 ~sp~~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~ 258 (812)
|+| ++++|++++.+ +.|.+|++...............+......+++ ++++|++++ .++.+.+|++....
T Consensus 57 ~sp-dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~~~~~~~~g-- 131 (361)
T 3scy_A 57 PSA-DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSITVFPIGQDG-- 131 (361)
T ss_dssp ECT-TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEEEEEBCTTS--
T ss_pred ECC-CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEEEEEeCCCC--
Confidence 999 99999988875 799999987642111123334445567777888 788777776 68899999997531
Q ss_pred CCCCCCceEE---c--------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc------ceec---cccccCC
Q psy4510 259 GIPTPPLFSF---S--------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------WQVD---QKPLVGH 318 (812)
Q Consensus 259 ~~~~~~~~~~---~--------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~------~~~~---~~~~~~h 318 (812)
....+... . .+...+.+++|+|++..+++++..++.|++|++..... .... ......+
T Consensus 132 --~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 209 (361)
T 3scy_A 132 --ALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAP 209 (361)
T ss_dssp --CBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCT
T ss_pred --cCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCC
Confidence 11111111 1 12334688999999943455555689999999876542 1100 1112234
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec--CCcCCCCeEEEEEcCCCCEEEEEeC--CCcEEEEe
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL--PNAHTSDVNVISWNRTEPLIVSGGD--DGCIHVWD 394 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~--~~~~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd 394 (812)
...+..++|+|+++.+++++..++.|.+|++.++. ...+..+ ...+......++|+|+|++|+++.. ++.|.+|+
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-LDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-EEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-eEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 45678999999999655555579999999987432 1112221 1334456789999999998766655 48999999
Q ss_pred cCCCCCCC--ceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCC
Q psy4510 395 LRRFKKGS--SVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWDLAV 443 (812)
Q Consensus 395 ~~~~~~~~--~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~ 443 (812)
+... .+. .+..+.. ...+..++|+|++. +|++++ .++.|.+|++..
T Consensus 289 ~~~~-~g~~~~~~~~~~-g~~~~~~~~spdg~-~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 289 VDET-NGTLTKVGYQLT-GIHPRNFIITPNGK-YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp ECTT-TCCEEEEEEEEC-SSCCCEEEECTTSC-EEEEEETTTTEEEEEEECT
T ss_pred EcCC-CCcEEEeeEecC-CCCCceEEECCCCC-EEEEEECCCCCEEEEEEEC
Confidence 9621 122 3444444 45678999999984 666665 678999976653
No 152
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.82 E-value=6.2e-18 Score=178.27 Aligned_cols=279 Identities=10% Similarity=0.072 Sum_probs=182.3
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC---CCceEEeeCCCCCCCCCCCCCceEEcCCCC
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD---PFQLAEHNKKRGKGPGIPTPPLFSFSGHLT 273 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~ 273 (812)
.++.|.+|.++...... .......+...+..++|+|+|+ |++++. ++.|.+|++.++ ..+.+..+..+..
T Consensus 14 ~~~~i~v~~~d~~tg~~-~~~~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g-----~~~~~~~~~~~~~ 86 (347)
T 3hfq_A 14 TSQGIYQGTLDTTAKTL-TNDGLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQ-----TAHKLNTVVAPGT 86 (347)
T ss_dssp SCCEEEEEEEETTTTEE-EEEEEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETT-----EEEEEEEEEEESC
T ss_pred CCCCEEEEEEcCCCCeE-EEeeeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCC-----cEEEeeeeecCCC
Confidence 35678888776532111 1122344567788999999999 666554 689999999764 2234555566777
Q ss_pred cEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceecccccc--C-------CCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 274 EGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLV--G-------HTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~--~-------h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
.+..++|+|++ .+|++++ .++.|.+|++...+.... ...+. + +...+.+++|+|+++ ++++...++.
T Consensus 87 ~p~~~a~spdg-~~l~~~~~~~~~v~v~~~~~~g~~~~-~~~~~~~~~~p~~~~~~~~~~~~~~spdg~-l~v~~~~~~~ 163 (347)
T 3hfq_A 87 PPAYVAVDEAR-QLVYSANYHKGTAEVMKIAADGALTL-TDTVQHSGHGPRPEQDGSHIHYTDLTPDNR-LAVIDLGSDK 163 (347)
T ss_dssp CCSEEEEETTT-TEEEEEETTTTEEEEEEECTTSCEEE-EEEEECCCCCSSTTCSSCCEEEEEECTTSC-EEEEETTTTE
T ss_pred CCEEEEECCCC-CEEEEEeCCCCEEEEEEeCCCCCeee-cceeecCCCCCCccccCCCceEEEECCCCc-EEEEeCCCCE
Confidence 88999999999 6666666 789999999964432111 11111 1 223588999999999 8888888999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCCCcEEEEecCCCCCCC--ceEEcccCC------CCE
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDDGCIHVWDLRRFKKGS--SVATFKHHT------APV 414 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~dg~i~iwd~~~~~~~~--~~~~~~~h~------~~v 414 (812)
|++|++...........+.......+..++|+|+|++++ ++..++.|.+|++... .+. .+..+.... ..+
T Consensus 164 v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~ 242 (347)
T 3hfq_A 164 VYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ-TGAFTQLGIVKTIPADYTAHNGA 242 (347)
T ss_dssp EEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT-TTEEEEEEEEESSCTTCCSCCEE
T ss_pred EEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC-CCceEEeeeeeecCCCCCCCCcc
Confidence 999999832222222222122344678899999999554 4667899999998731 111 222332222 348
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG- 493 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~- 493 (812)
..++|+|++..++++...++.|.+|++...... ..+.....+...+..++|+|++..++++...++
T Consensus 243 ~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~-------------~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~ 309 (347)
T 3hfq_A 243 AAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHL-------------TLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDN 309 (347)
T ss_dssp EEEEECTTSCEEEEEEETTTEEEEEEECGGGCE-------------EEEEEEECSSSCCCEEEECTTSSEEEEEETTTTE
T ss_pred eeEEECCCCCEEEEEeCCCCEEEEEEECCCCcE-------------EEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCc
Confidence 899999998545567777899999999732110 012222222346889999999876777666544
Q ss_pred eEEEEe
Q psy4510 494 FNIFRT 499 (812)
Q Consensus 494 ~~~~~~ 499 (812)
+.+|..
T Consensus 310 v~v~~~ 315 (347)
T 3hfq_A 310 ATLYAR 315 (347)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 556643
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.82 E-value=8.2e-19 Score=204.59 Aligned_cols=314 Identities=16% Similarity=0.091 Sum_probs=199.2
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCC---CeeeeeEcCCCCcEEEeeC---------CCceE
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTN---SAEDLQWSDLKTALQTVDD---------PFQLA 248 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~---~V~~l~~s~~~~~l~s~~~---------d~~i~ 248 (812)
.++|+| ++.+++++ .|+.|++||+.+++ ....+.+|.. .|.+++|||||++|++++. ++.|+
T Consensus 20 ~~~~s~-dg~~~~~~-~d~~i~~~~~~~g~----~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 20 FPNWIS-GQEYLHQS-ADNNIVLYNIETGQ----SYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCEESS-SSEEEEEC-TTSCEEEEESSSCC----EEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred ccEECC-CCeEEEEc-CCCCEEEEEcCCCc----EEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 579999 99766665 58999999999886 3344444443 4999999999999998876 78999
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE------
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV------ 322 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v------ 322 (812)
+||+.++. ......+ ...+..++|||+| ..|+.+. ++.|++|++.++.... ....++...|
T Consensus 94 ~~d~~~g~-----~~~~~~l---~~~~~~~~~SPDG-~~la~~~-~~~i~~~~~~~g~~~~---l~~~~~~~~v~~g~~~ 160 (719)
T 1z68_A 94 IYDLSNGE-----FVRGNEL---PRPIQYLCWSPVG-SKLAYVY-QNNIYLKQRPGDPPFQ---ITFNGRENKIFNGIPD 160 (719)
T ss_dssp EEETTTTE-----ECCSSCC---CSSBCCEEECSST-TCEEEEE-TTEEEEESSTTSCCEE---CCCCCBTTTEEESSCC
T ss_pred EEECCCCc-----cccceec---CcccccceECCCC-CEEEEEE-CCeEEEEeCCCCCcEE---EecCCCcCCeEccccc
Confidence 99998862 1000112 2457889999999 6777775 7899999998775311 1112222222
Q ss_pred -----------EEEEEcCCCCeEEEEEECCC----------------------------------eEEEEECCCCCcc--
Q psy4510 323 -----------EDLQWSPGEKRVLASCSVDL----------------------------------SIRIWDTRVINTK-- 355 (812)
Q Consensus 323 -----------~~~~~~p~~~~~l~s~~~dg----------------------------------~i~iwd~~~~~~~-- 355 (812)
.+++|+|+|+. |++++.|. .|++||+.++...
T Consensus 161 ~v~~ee~~~~~~~~~wSPDG~~-la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~ 239 (719)
T 1z68_A 161 WVYEEEMLATKYALWWSPNGKF-LAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGP 239 (719)
T ss_dssp HHHHHHTTCSSCCEEECTTSSE-EEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCC
T ss_pred ceeeeecccCcccEEECCCCCE-EEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccce
Confidence 48999999995 77766542 7889999853211
Q ss_pred cce---eecCCcCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEe----cCCCCCCCceEEc----ccCCCCEE-----
Q psy4510 356 SCM---LTLPNAHTSDVNVISWNRTEPLIVSGGDD----GCIHVWD----LRRFKKGSSVATF----KHHTAPVT----- 415 (812)
Q Consensus 356 ~~~---~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd----~~~~~~~~~~~~~----~~h~~~v~----- 415 (812)
..+ ..+ ..|...+..++|+|+++++++.... ..|.+|| +.. ++....+ ..|...+.
T Consensus 240 ~~~~~~~~~-~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~---g~~~~~~~~~~~~~~~~~~~~~~~ 315 (719)
T 1z68_A 240 QEVPVPAMI-ASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQT---WDCPKTQEHIEESRTGWAGGFFVS 315 (719)
T ss_dssp EECCCCHHH-HTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSS---EECCGGGEEEEECSSSCSSSSSCC
T ss_pred eEccCCccC-CCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCC---CceEEEEecccccCCceEccccCC
Confidence 001 111 3577889999999998777764433 2488899 653 2222223 35666666
Q ss_pred EEEEccCCCcEEE-EEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC-
Q psy4510 416 TVEWHPTESSTFA-SGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN- 491 (812)
Q Consensus 416 ~v~~~p~~~~~l~-s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~- 491 (812)
.+.|+|++..+++ ++..+|. |.+||+.... ......+...+..+.+. ++..+++++..
T Consensus 316 ~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~~~-----------------~~~lt~~~~~v~~~~~~-d~~~i~~~~~~~ 377 (719)
T 1z68_A 316 TPVFSYDAISYYKIFSDKDGYKHIHYIKDTVEN-----------------AIQITSGKWEAINIFRV-TQDSLFYSSNEF 377 (719)
T ss_dssp CCEECTTSSCEEEEEECTTSCEEEEEESSCSTT-----------------CEECSCSSSCEEEEEEE-CSSEEEEEESCG
T ss_pred ccEECCCCCeEEEEEEccCCceEEEEEECCCCc-----------------eEecccCceEEEEEEEE-eCCEEEEEEecC
Confidence 7899999865544 3445664 5566665442 22222334457777777 66556655554
Q ss_pred ----CCeEEEEeCCCCC-cccEEeec----CCCCeeEEEEcCCCCCeEEEeeCC
Q psy4510 492 ----SGFNIFRTISDLP-SQLLFIHL----GQKEIKELHWHPQLPGTIISTANS 536 (812)
Q Consensus 492 ----~~~~~~~~~~~~~-~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~~~ 536 (812)
....+|....... ........ +...+..+.|+|++...++.....
T Consensus 378 ~~~~~~~~l~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~s~dg~~l~~~~s~~ 431 (719)
T 1z68_A 378 EEYPGRRNIYRISIGSYPPSKKCVTCHLRKERCQYYTASFSDYAKYYALVCYGP 431 (719)
T ss_dssp GGCTTCBEEEEEECSSSSCCEEESSTTTTTTTBCBEEEEECGGGSSEEEEECCB
T ss_pred CCCCceEEEEEEeCCCCCCCceeccCccCCCCCceEEEEECCCCCEEEEEcCCC
Confidence 3466776543111 11111111 234677899999876555544433
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.81 E-value=5.3e-18 Score=192.34 Aligned_cols=264 Identities=12% Similarity=0.018 Sum_probs=188.5
Q ss_pred CCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEEe
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVWD 394 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iwd 394 (812)
..+|.+++|+|+|+. ||+++. ||+++||++.. . ....+...+...+..++|+|+ +++++++. +...++|.
T Consensus 21 ~~~~~~~~~~~DG~~-la~~s~~~g~~~lw~~~~---g-~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~ 94 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDK-LLVVGFSEGSVNAYLYDG---G-ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFK 94 (582)
T ss_dssp HSCEEEEEEEETTTE-EEEEEEETTEEEEEEEET---T-EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEE
T ss_pred ccchheeecCCCCCe-EEEEEccCCceeEEEEcC---C-CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEE
Confidence 457999999999995 666665 99999999852 2 234442334468999999999 77777765 45567766
Q ss_pred cCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 395 LRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 395 ~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
+.....+... .+..+. .+...+|+|++..++++++.++.+.+||+.+.+. ...
T Consensus 95 ~~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~-----------------~~l-------- 147 (582)
T 3o4h_A 95 VNTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGATEDRVALYALDGGGL-----------------REL-------- 147 (582)
T ss_dssp EETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEE-----------------EEE--------
T ss_pred EeccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecCCCCceEEEccCCcE-----------------EEe--------
Confidence 6431122222 333222 3446788888866666666666677998865511 000
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccccc
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEE 554 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 554 (812)
T Consensus 148 -------------------------------------------------------------------------------- 147 (582)
T 3o4h_A 148 -------------------------------------------------------------------------------- 147 (582)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCc----ceEEEEeccccccccCCccc
Q psy4510 555 DNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEV----GKVGIWDLKTALQTVDDPFQ 630 (812)
Q Consensus 555 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~d----g~I~iwd~~~~~~~~~~~~~ 630 (812)
..+.. .+++|||||++|+++ +.+ +.|++||+.++.
T Consensus 148 -----------------------------~~~~~--~~~~~spDG~~la~~--~~~~~~~~~i~~~d~~~g~-------- 186 (582)
T 3o4h_A 148 -----------------------------ARLPG--FGFVSDIRGDLIAGL--GFFGGGRVSLFTSNLSSGG-------- 186 (582)
T ss_dssp -----------------------------EEESS--CEEEEEEETTEEEEE--EEEETTEEEEEEEETTTCC--------
T ss_pred -----------------------------ecCCC--ceEEECCCCCEEEEE--EEcCCCCeEEEEEcCCCCC--------
Confidence 00000 456789999999876 444 789999998875
Q ss_pred ccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCc--eEEEEecCCCceeEEE----------E--
Q psy4510 631 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWSVY----------L-- 696 (812)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg--~v~iWd~~~~~~~~~~----------~-- 696 (812)
...+.+|.+.+..++||| |++.|++++.++ .|++||+.+++.. .. +
T Consensus 187 ------------------~~~l~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~ 246 (582)
T 3o4h_A 187 ------------------LRVFDSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPT 246 (582)
T ss_dssp ------------------CEEECCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCS
T ss_pred ------------------ceEeecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhc
Confidence 346778889999999999 889999888888 9999999987655 21 3
Q ss_pred ------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCceeEEeeccCCc---eEEeeecC
Q psy4510 697 ------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDRS---NRIGARRD 767 (812)
Q Consensus 697 ------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~---i~iWd~~~ 767 (812)
|+|||.++++++.+++++||++ ++. .. .+.+.|.+++|| +|+ ++++++.+.+ +.+|+...
T Consensus 247 ~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~----~~---~~~~~v~~~~~s-dg~-~l~~~s~~~~p~~l~~~d~~~ 315 (582)
T 3o4h_A 247 AITWLGYLPDGRLAVVARREGRSAVFID--GER----VE---APQGNHGRVVLW-RGK-LVTSHTSLSTPPRIVSLPSGE 315 (582)
T ss_dssp EEEEEEECTTSCEEEEEEETTEEEEEET--TEE----EC---CCSSEEEEEEEE-TTE-EEEEEEETTEEEEEEEETTCC
T ss_pred cccceeEcCCCcEEEEEEcCCcEEEEEE--CCe----ec---cCCCceEEEEec-CCE-EEEEEcCCCCCCeEEEEcCCC
Confidence 8999999999999999999999 542 22 234679999999 998 7888887754 66676553
No 155
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.81 E-value=1.5e-17 Score=193.80 Aligned_cols=190 Identities=9% Similarity=0.062 Sum_probs=132.4
Q ss_pred CCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc-----EEEEEecCCCCCEEEEEeCC---
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE-----GFAMDWSSTEPGVLATGDCK--- 294 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-----v~~l~~sp~~~~~l~sg~~d--- 294 (812)
.....+++|+|++++++++ ++.|++|++.++ ++...+.+|... ...++|||++ .+|+.++.+
T Consensus 16 ~~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Spdg-~~l~~~~~~~~~ 85 (740)
T 4a5s_A 16 RLKLYSLRWISDHEYLYKQ--ENNILVFNAEYG-------NSSVFLENSTFDEFGHSINDYSISPDG-QFILLEYNYVKQ 85 (740)
T ss_dssp CCCCCCEEECSSSEEEEEE--TTEEEEEETTTC-------CEEEEECTTTTTTCCSCCCEEEECTTS-SEEEEEEEEEEC
T ss_pred cccccccEECCCCcEEEEc--CCcEEEEECCCC-------ceEEEEechhhhhhcccccceEECCCC-CEEEEEECCeee
Confidence 3456789999999988886 899999999986 455566776643 2347899999 777777765
Q ss_pred ------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 295 ------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 295 ------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
+.+.+||+.++. ...+..|...+...+|||+|+. ||.+ .++.|++|++.++... ..+. .++...
T Consensus 86 ~r~~~~~~~~~~d~~~~~-----~~~l~~~~~~~~~~~~SPdG~~-la~~-~~~~i~~~~~~~~~~~--~lt~-~g~~~~ 155 (740)
T 4a5s_A 86 WRHSYTASYDIYDLNKRQ-----LITEERIPNNTQWVTWSPVGHK-LAYV-WNNDIYVKIEPNLPSY--RITW-TGKEDI 155 (740)
T ss_dssp SSSCEEEEEEEEETTTTE-----ECCSSCCCTTEEEEEECSSTTC-EEEE-ETTEEEEESSTTSCCE--ECCS-CCBTTT
T ss_pred EEEccceEEEEEECCCCc-----EEEcccCCCcceeeEECCCCCE-EEEE-ECCeEEEEECCCCceE--EEcC-CCCccc
Confidence 567799999875 3456677889999999999996 6666 4689999999754321 1111 233222
Q ss_pred e-----------------EEEEEcCCCCEEEEEeCC-CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE
Q psy4510 369 V-----------------NVISWNRTEPLIVSGGDD-GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 369 v-----------------~~l~~~~~~~~l~sg~~d-g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
+ ..+.|+|+|+.||.++.| +.+.+|++....... .+...+..+.+.+.|..
T Consensus 156 ~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~------~~~~~~~~~~yp~~G~~----- 224 (740)
T 4a5s_A 156 IYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDES------LQYPKTVRVPYPKAGAV----- 224 (740)
T ss_dssp EEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTT------CSSCEEEEEECCBTTSC-----
T ss_pred eecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCC------CCCCcceeecCCCCcCc-----
Confidence 2 358999999988887655 448888875322111 34455677777766532
Q ss_pred ECCCCEEEEEcCC
Q psy4510 431 GADDQIALWDLAV 443 (812)
Q Consensus 431 ~~dg~v~iwd~~~ 443 (812)
....+|.+||+.+
T Consensus 225 ~~~~~l~v~d~~~ 237 (740)
T 4a5s_A 225 NPTVKFFVVNTDS 237 (740)
T ss_dssp CCEEEEEEEETTS
T ss_pred CCeeEEEEEECCC
Confidence 1122578888876
No 156
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.81 E-value=3.8e-18 Score=178.94 Aligned_cols=296 Identities=9% Similarity=0.025 Sum_probs=184.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCC-CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC
Q psy4510 286 GVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTN-SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~-~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
.+|++++.++.|.+||+.++. ....+. ++.. .+..++|+|+++.++++++.++.|.+||+.++. .+..+..
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~ 74 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGE---TLGRIDL 74 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCC---EEEEEEC
T ss_pred cEEEEcCCCCeEEEEECCCCc----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCC---eEeeEEc
Confidence 478999999999999998875 233332 2222 478999999998777788888999999998543 3333322
Q ss_pred cC----CCCeEEEEEcCCCCEEEEEe------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEE
Q psy4510 364 AH----TSDVNVISWNRTEPLIVSGG------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTF 427 (812)
Q Consensus 364 ~~----~~~v~~l~~~~~~~~l~sg~------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 427 (812)
.+ ...+.+++|+|++++++++. .++.|.+||+. .++.+..+.. ...+.+++|+|++. +|
T Consensus 75 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~---~~~~~~~~~~-~~~~~~~~~s~dg~-~l 149 (337)
T 1pby_B 75 STPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAE---TLSRRKAFEA-PRQITMLAWARDGS-KL 149 (337)
T ss_dssp CBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETT---TTEEEEEEEC-CSSCCCEEECTTSS-CE
T ss_pred CCcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECC---CCcEEEEEeC-CCCcceeEECCCCC-EE
Confidence 22 22577899999999888875 57999999997 3455555543 45678899999985 55
Q ss_pred EEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeE--EEEeCCCCCc
Q psy4510 428 ASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFN--IFRTISDLPS 505 (812)
Q Consensus 428 ~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~--~~~~~~~~~~ 505 (812)
+++ ++.|.+||+.+.+ .............+.|+|++..++++...++.. .|....
T Consensus 150 ~~~--~~~i~~~d~~~~~-----------------~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~---- 206 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGT-----------------LVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTAR---- 206 (337)
T ss_dssp EEE--SSSEEEEETTTTE-----------------EEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEB----
T ss_pred EEe--CCeEEEEECCCCc-----------------EeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccc----
Confidence 555 6889999998763 221111111111226778776555444333321 111000
Q ss_pred ccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEec
Q psy4510 506 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIR 585 (812)
Q Consensus 506 ~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (812)
...++.... .....+..+.. .... ........
T Consensus 207 -----------------~~~~~~~~~----~~~~~v~~~d~---~~~~------------------------~~~~~~~~ 238 (337)
T 1pby_B 207 -----------------KDIDPADPT----AYRTGLLTMDL---ETGE------------------------MAMREVRI 238 (337)
T ss_dssp -----------------TTSCTTSGG----GEEEEEEEEET---TTCC------------------------EEEEEEEE
T ss_pred -----------------ccccccccc----ccccceEEEeC---CCCC------------------------ceEeecCC
Confidence 000000000 00000111111 1000 00112334
Q ss_pred ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeC
Q psy4510 586 HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWS 665 (812)
Q Consensus 586 h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~s 665 (812)
+...+..++|+|+|++++++ ++.|++||+.+++ .+..+.. ...+.+++|+
T Consensus 239 ~~~~~~~~~~s~dg~~l~~~----~~~v~~~d~~~~~-------------------------~~~~~~~-~~~~~~~~~s 288 (337)
T 1pby_B 239 MDVFYFSTAVNPAKTRAFGA----YNVLESFDLEKNA-------------------------SIKRVPL-PHSYYSVNVS 288 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEE----ESEEEEEETTTTE-------------------------EEEEEEC-SSCCCEEEEC
T ss_pred CCCceeeEEECCCCCEEEEe----CCeEEEEECCCCc-------------------------CcceecC-CCceeeEEEC
Confidence 55677889999999998876 6899999998775 3333432 2467889999
Q ss_pred CCCCCeEEecCCCceEEEEecCCCceeEEE
Q psy4510 666 STEPGVLATGDCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 666 p~~~~~las~s~Dg~v~iWd~~~~~~~~~~ 695 (812)
| ++++|++++.++.|++||+.+++.....
T Consensus 289 ~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 289 T-DGSTVWLGGALGDLAAYDAETLEKKGQV 317 (337)
T ss_dssp T-TSCEEEEESBSSEEEEEETTTCCEEEEE
T ss_pred C-CCCEEEEEcCCCcEEEEECcCCcEEEEE
Confidence 9 7778888888899999998877665544
No 157
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=2e-17 Score=174.75 Aligned_cols=273 Identities=10% Similarity=0.044 Sum_probs=190.7
Q ss_pred CCCeeeeeEcCCCCcEEEeeC-------CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC
Q psy4510 223 TNSAEDLQWSDLKTALQTVDD-------PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR 295 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~-------d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg 295 (812)
...+..++|+|++++|++++. ++.|.+||..++ +.+..+.. ...+.+++|+|++..+++++..++
T Consensus 40 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~-------~~~~~~~~-~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTL-------EVTQAIHN-DLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTC-------CEEEEEEE-SSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCC-------eEEEEEec-CCCcceEEECCCCCEEEEEecCCC
Confidence 346789999999999888774 568999999875 55555543 345788999999944666667789
Q ss_pred cEEEEeCCCCCcceeccccccCCCC---------CEEEEEEcCCCCeEEEEE-ECCCeEEEEECCCCCcccceeecCCcC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTN---------SVEDLQWSPGEKRVLASC-SVDLSIRIWDTRVINTKSCMLTLPNAH 365 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~~~~~ 365 (812)
.|.+||+.++.. ...+..+.. .+.+++|+|+++.+++++ +.++.|.+||+.+. ..+..+ ..+
T Consensus 112 ~v~~~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~---~~~~~~-~~~ 183 (353)
T 3vgz_A 112 AVTAIDAKTGEV----KGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNI---KLKTAI-QNT 183 (353)
T ss_dssp EEEEEETTTCCE----EEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTT---EEEEEE-CCC
T ss_pred EEEEEeCCCCee----EEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCC---ceEEEe-cCC
Confidence 999999988762 233332221 278999999999655555 35889999999843 334444 334
Q ss_pred CCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc----CCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 366 TSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH----HTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 366 ~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
...+.+++|+|+++++++++.++.|.+||+. .++.+..+.. +...+.+++|+|++..++++...++.|.+||+
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 260 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTA---DNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDT 260 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETT---TTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEET
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECC---CCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 5568889999999999999999999999997 3555555543 56678899999998645555555699999999
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-eEEEEeCCCCCcccEEeecCCCCeeEE
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-FNIFRTISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~ 520 (812)
.+.+. ........ ...++|+|++..++++...++ +.+|+..... ..........+..+
T Consensus 261 ~~~~~-----------------~~~~~~~~-~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~---~~~~~~~~~~~~~~ 319 (353)
T 3vgz_A 261 RNGNI-----------------LAKVAAPE-SLAVLFNPARNEAYVTHRQAGKVSVIDAKSYK---VVKTFDTPTHPNSL 319 (353)
T ss_dssp TTCCE-----------------EEEEECSS-CCCEEEETTTTEEEEEETTTTEEEEEETTTTE---EEEEEECCSEEEEE
T ss_pred CCCcE-----------------EEEEEcCC-CceEEECCCCCEEEEEECCCCeEEEEECCCCe---EEEEEecCCCCCeE
Confidence 87732 11111112 356999999887777775554 5555543322 22222334478899
Q ss_pred EEcCCCCCeEEEeeC
Q psy4510 521 HWHPQLPGTIISTAN 535 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~ 535 (812)
+|+|++..++++...
T Consensus 320 ~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 320 ALSADGKTLYVSVKQ 334 (353)
T ss_dssp EECTTSCEEEEEEEC
T ss_pred EEcCCCCEEEEEEcc
Confidence 999996555555544
No 158
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.80 E-value=5.4e-17 Score=172.07 Aligned_cols=280 Identities=10% Similarity=0.044 Sum_probs=178.3
Q ss_pred cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEEeeCCCCCCCCCCCCCceEEcCC
Q psy4510 196 DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAEHNKKRGKGPGIPTPPLFSFSGH 271 (812)
Q Consensus 196 ~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~~~~~~~~h 271 (812)
+.++.|++|.++............ +...+..++|+|++++|++++.+ +.+.+|++..... ..+.+.....+
T Consensus 24 ~~~~~i~~~~~d~~~g~~~~~~~~--~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g---~~~~~~~~~~~ 98 (361)
T 3scy_A 24 GNSKGIYTFRFNEETGESLPLSDA--EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKG---TLHLLNTQKTM 98 (361)
T ss_dssp SSCCEEEEEEEETTTCCEEEEEEE--ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTT---EEEEEEEEECS
T ss_pred CCCCCEEEEEEeCCCCCEEEeecc--cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCC---cEEEeeEeccC
Confidence 346789999875432111122222 77888999999999999998875 7999999875200 12334444555
Q ss_pred CCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccc--c--------ccCCCCCEEEEEEcCCCCeEEEEEEC
Q psy4510 272 LTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQK--P--------LVGHTNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~--~--------~~~h~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
......+++ ++ .+|++++ .++.|.+|++...+....... . ...+...+.+++|+|+++.+++++..
T Consensus 99 ~~~p~~~~~--dg-~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~ 175 (361)
T 3scy_A 99 GADPCYLTT--NG-KNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLG 175 (361)
T ss_dssp SSCEEEEEE--CS-SEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETT
T ss_pred CCCcEEEEE--CC-CEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCC
Confidence 667778888 66 5555554 688999999976542111110 0 11123346889999999976666667
Q ss_pred CCeEEEEECCCCCc------ccce---eecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEc---
Q psy4510 341 DLSIRIWDTRVINT------KSCM---LTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATF--- 407 (812)
Q Consensus 341 dg~i~iwd~~~~~~------~~~~---~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~--- 407 (812)
++.|++|++..... .... ......+......++|+|+|+++++++ .++.|.+|++.... ...+..+
T Consensus 176 ~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g~-~~~~~~~~~~ 254 (361)
T 3scy_A 176 TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFRYADGM-LDEIQTVAAD 254 (361)
T ss_dssp TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEEEETTE-EEEEEEEESC
T ss_pred CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCCc-eEEeEEEecC
Confidence 89999999875332 1000 112234456688999999999777666 68999999997311 1112222
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEEC--CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCE
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGA--DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGT 485 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~ 485 (812)
..+......++|+|++. +|+++.. ++.|.+|++...... ...+........+..++|+|++..+
T Consensus 255 ~~~~~~~~~i~~spdg~-~l~v~~~~~~~~i~v~~~~~~~g~-------------~~~~~~~~~g~~~~~~~~spdg~~l 320 (361)
T 3scy_A 255 TVNAQGSGDIHLSPDGK-YLYASNRLKADGVAIFKVDETNGT-------------LTKVGYQLTGIHPRNFIITPNGKYL 320 (361)
T ss_dssp SSCCCCEEEEEECTTSS-EEEEEECSSSCEEEEEEECTTTCC-------------EEEEEEEECSSCCCEEEECTTSCEE
T ss_pred CCCCCCcccEEECCCCC-EEEEECCCCCCEEEEEEEcCCCCc-------------EEEeeEecCCCCCceEEECCCCCEE
Confidence 33445678999999985 5655544 589999999632110 0122222223468899999999877
Q ss_pred EEEEeCCC-eEEEE
Q psy4510 486 IISTANSG-FNIFR 498 (812)
Q Consensus 486 ~~~~~~~~-~~~~~ 498 (812)
+++...++ +.+|.
T Consensus 321 ~~~~~~~~~v~v~~ 334 (361)
T 3scy_A 321 LVACRDTNVIQIFE 334 (361)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCCEEEEE
Confidence 77765544 55553
No 159
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.79 E-value=1e-17 Score=175.60 Aligned_cols=264 Identities=9% Similarity=0.057 Sum_probs=179.8
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccccccC-CCCC-CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCce
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTN-SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~-~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
++|++++.++.|++||+.+++ ....+. ++.. .+..++|+|++++++ ++..++.|.+||+.++ +.+.
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~-------~~~~ 70 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMA----VDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTG-------ETLG 70 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTE----EEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTC-------CEEE
T ss_pred cEEEEcCCCCeEEEEECCCCc----EEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCC-------CeEe
Confidence 478999999999999998875 233332 2222 488999999998765 4556789999999875 4444
Q ss_pred EEcC-C----CCcEEEEEecCCCCCEEEEEe------------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 267 SFSG-H----LTEGFAMDWSSTEPGVLATGD------------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 267 ~~~~-h----~~~v~~l~~sp~~~~~l~sg~------------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.+.. + ...+.+++|+|++ .+|++++ .++.|.+||+.++. ....+. ....+.+++|+|
T Consensus 71 ~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~----~~~~~~-~~~~~~~~~~s~ 144 (337)
T 1pby_B 71 RIDLSTPEERVKSLFGAALSPDG-KTLAIYESPVRLELTHFEVQPTRVALYDAETLS----RRKAFE-APRQITMLAWAR 144 (337)
T ss_dssp EEECCBTTEEEECTTCEEECTTS-SEEEEEEEEEEECSSCEEECCCEEEEEETTTTE----EEEEEE-CCSSCCCEEECT
T ss_pred eEEcCCcccccccccceEECCCC-CEEEEEecccccccccccccCceEEEEECCCCc----EEEEEe-CCCCcceeEECC
Confidence 4442 2 2256789999998 6777775 57999999998765 222333 244678899999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEEEeC-CC-------------------
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVSGGD-DG------------------- 388 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~-dg------------------- 388 (812)
+++. |+++ ++.|++||+.++. ....+...+ ... +.|+|++..++..+. ++
T Consensus 145 dg~~-l~~~--~~~i~~~d~~~~~---~~~~~~~~~~~~~---~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (337)
T 1pby_B 145 DGSK-LYGL--GRDLHVMDPEAGT---LVEDKPIQSWEAE---TYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPT 215 (337)
T ss_dssp TSSC-EEEE--SSSEEEEETTTTE---EEEEECSTTTTTT---TBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGG
T ss_pred CCCE-EEEe--CCeEEEEECCCCc---EeeeeeccccCCC---ceeCCCccEEeeeccCCCceeeeeecccccccccccc
Confidence 9996 5555 6899999998543 333332222 122 378898885544433 22
Q ss_pred ----cEEEEecCCCCCCCc-eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 389 ----CIHVWDLRRFKKGSS-VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 389 ----~i~iwd~~~~~~~~~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
.|.+||+.. ++. ...+..+...+.+++|+|++ .+++++ ++.|.+||+.+.+ .
T Consensus 216 ~~~~~v~~~d~~~---~~~~~~~~~~~~~~~~~~~~s~dg-~~l~~~--~~~v~~~d~~~~~-----------------~ 272 (337)
T 1pby_B 216 AYRTGLLTMDLET---GEMAMREVRIMDVFYFSTAVNPAK-TRAFGA--YNVLESFDLEKNA-----------------S 272 (337)
T ss_dssp GEEEEEEEEETTT---CCEEEEEEEECSSCEEEEEECTTS-SEEEEE--ESEEEEEETTTTE-----------------E
T ss_pred ccccceEEEeCCC---CCceEeecCCCCCceeeEEECCCC-CEEEEe--CCeEEEEECCCCc-----------------C
Confidence 468999974 322 33445567788999999997 466666 6899999998763 2
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCC
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISD 502 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 502 (812)
.........+..++|+|++..+++++..+.+.+|+....
T Consensus 273 ~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~ 311 (337)
T 1pby_B 273 IKRVPLPHSYYSVNVSTDGSTVWLGGALGDLAAYDAETL 311 (337)
T ss_dssp EEEEECSSCCCEEEECTTSCEEEEESBSSEEEEEETTTC
T ss_pred cceecCCCceeeEEECCCCCEEEEEcCCCcEEEEECcCC
Confidence 222233456889999999876766655455666654443
No 160
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.77 E-value=7.2e-17 Score=173.02 Aligned_cols=150 Identities=11% Similarity=0.056 Sum_probs=101.6
Q ss_pred ccceEEEEEEec-cCCeEEEEeecC----cceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCC--Cc
Q psy4510 586 HRGCINRVRTCQ-YGSTTLAGVWGE----VGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL--TE 658 (812)
Q Consensus 586 h~~~v~~l~~s~-~g~~l~~~~~~~----dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~--~~ 658 (812)
+...+..++|+| +|++|+.+..+. ...|.++++.... ...+..+. ..
T Consensus 186 ~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~--------------------------~~~l~~~~~~~~ 239 (388)
T 3pe7_A 186 ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTN--------------------------MRKVKTHAEGES 239 (388)
T ss_dssp ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCC--------------------------CEESCCCCTTEE
T ss_pred CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCc--------------------------eEEeeeCCCCcc
Confidence 334577888999 998887763211 3367788876553 22233333 35
Q ss_pred eEEEEeCCCCCCeEEecCC-----CceEEEEecCCCceeEEE---------------EecCCCCEEEee---------cC
Q psy4510 659 GFAMDWSSTEPGVLATGDC-----KRNIHIWTPREAGAWSVY---------------LYTNRFGVLATG---------DC 709 (812)
Q Consensus 659 V~~l~~sp~~~~~las~s~-----Dg~v~iWd~~~~~~~~~~---------------~~s~dg~~lasg---------s~ 709 (812)
+..++||| +++.|+..+. +..|.+||+.+++...+. .|+|||+.|+.. ..
T Consensus 240 ~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~ 318 (388)
T 3pe7_A 240 CTHEFWVP-DGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIEN 318 (388)
T ss_dssp EEEEEECT-TSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CC
T ss_pred cccceECC-CCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCC
Confidence 78899999 6776655333 234999999998753321 488999988754 45
Q ss_pred CCeEEEeecCCCCCcccccccccCCCc-----------ceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 710 KRNIHIWTPREAGAWQVDQKPLVGHTN-----------SVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 710 dg~i~iwd~~~~~~~~~~~~~~~gH~~-----------~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+..|++||+.+++ ...+..|.. .+.+++|||||+++++++..++...||.+.-
T Consensus 319 ~~~i~~~d~~~~~-----~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 319 DPFLYVFNMKNGT-----QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALYLATL 382 (388)
T ss_dssp CCEEEEEETTTTE-----EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEEC
T ss_pred CCEEEEEeccCCc-----eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEEEEEC
Confidence 6799999998865 234555555 5889999999995555666788888887653
No 161
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.77 E-value=2.1e-16 Score=184.17 Aligned_cols=373 Identities=12% Similarity=0.061 Sum_probs=218.7
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCC-----eeeeeEcCCCCcEEEeeCC-------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNS-----AEDLQWSDLKTALQTVDDP------- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~-----V~~l~~s~~~~~l~s~~~d------- 244 (812)
.....++|+| ++.+|+++ ||.|++||+.+++ ....+.+|... ...++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~-dg~~~~~~--~~~i~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~ 89 (740)
T 4a5s_A 17 LKLYSLRWIS-DHEYLYKQ--ENNILVFNAEYGN----SSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHS 89 (740)
T ss_dssp CCCCCEEECS-SSEEEEEE--TTEEEEEETTTCC----EEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSC
T ss_pred ccccccEECC-CCcEEEEc--CCcEEEEECCCCc----eEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEc
Confidence 3455799999 99999997 8999999999887 34445666543 2347889999999998876
Q ss_pred --CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 245 --FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 245 --~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
+.+.+||+.++ ....+..|.+.+...+|||+| ..||.+. ++.|++|++.++... ..+..++...+
T Consensus 90 ~~~~~~~~d~~~~--------~~~~l~~~~~~~~~~~~SPdG-~~la~~~-~~~i~~~~~~~~~~~---~lt~~g~~~~~ 156 (740)
T 4a5s_A 90 YTASYDIYDLNKR--------QLITEERIPNNTQWVTWSPVG-HKLAYVW-NNDIYVKIEPNLPSY---RITWTGKEDII 156 (740)
T ss_dssp EEEEEEEEETTTT--------EECCSSCCCTTEEEEEECSST-TCEEEEE-TTEEEEESSTTSCCE---ECCSCCBTTTE
T ss_pred cceEEEEEECCCC--------cEEEcccCCCcceeeEECCCC-CEEEEEE-CCeEEEEECCCCceE---EEcCCCCccce
Confidence 45679999985 223456677889999999999 6777774 689999999877531 11222332222
Q ss_pred -----------------EEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 323 -----------------EDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 323 -----------------~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
..+.|+|+|+. ||.++ .++.+++|++...... ..+...+..+.+.+.|..
T Consensus 157 ~~g~~~~v~~ee~~~~~~~~~wSpDg~~-la~~~~d~~~v~~~~~~~~~~~-------~~~~~~~~~~~yp~~G~~---- 224 (740)
T 4a5s_A 157 YNGITDWVYEEEVFSAYSALWWSPNGTF-LAYAQFNDTEVPLIEYSFYSDE-------SLQYPKTVRVPYPKAGAV---- 224 (740)
T ss_dssp EESBCCHHHHHHTSSSSBCEEECTTSSE-EEEEEEECTTCCEEEEEECCST-------TCSSCEEEEEECCBTTSC----
T ss_pred ecCcccccccchhcCCCcceEECCCCCE-EEEEEEcccCCceEEEEeecCC-------CCCCCcceeecCCCCcCc----
Confidence 35899999996 55555 4455888886421111 124455677777776642
Q ss_pred eCCCcEEEEecCCCCCCC--ceEEcc------cCCCCEEEEEEccCCCcEEEEEEC----CCCEEEEEcCCCC----chh
Q psy4510 385 GDDGCIHVWDLRRFKKGS--SVATFK------HHTAPVTTVEWHPTESSTFASGGA----DDQIALWDLAVER----DSE 448 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~--~~~~~~------~h~~~v~~v~~~p~~~~~l~s~~~----dg~v~iwd~~~~~----~~~ 448 (812)
.....|++||+.....+. ....+. +|...+..++|+|++. +++.... +..|.+||+.+++ ...
T Consensus 225 ~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~-~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~ 303 (740)
T 4a5s_A 225 NPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER-ISLQWLRRIQNYSVMDICDYDESSGRWNCLV 303 (740)
T ss_dssp CCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE-EEEEEEESSTTEEEEEEEEEETTTTEEEECG
T ss_pred CCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe-EEEEEeCCCCCEEEEEEEECCCCccccceeE
Confidence 112368999997400021 233333 3778899999999974 5554432 2369999998774 100
Q ss_pred HHHhhhhhccCCCceEEeecCCCc-----eeEEEEcCCCCCEE-EEEeCCC-eEEEEe-CCCCCcccEEeecCCCCeeEE
Q psy4510 449 IEQREAELKDLPSQLLFIHLGQKE-----IKELHWHPQLPGTI-ISTANSG-FNIFRT-ISDLPSQLLFIHLGQKEIKEL 520 (812)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~~~~~~~-----v~~~~~~p~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~i~~~ 520 (812)
...+....+... .....|+|++..++ .....++ ..+|.. .... .......+...+..+
T Consensus 304 ------------~~~l~~~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~~G~~~l~~~~~~~~--~~~~lT~g~~~v~~~ 369 (740)
T 4a5s_A 304 ------------ARQHIEMSTTGWVGRFRPSEPHFTLDGNSFYKIISNEEGYRHICYFQIDKK--DCTFITKGTWEVIGI 369 (740)
T ss_dssp ------------GGCEEEECSSSCSSSSSCCCCEECTTSSEEEEEEECTTSCEEEEEEETTCS--SCEESCCSSSCEEEE
T ss_pred ------------EEEeeeccCCceEccCcCCCceEcCCCCEEEEEEEcCCCceEEEEEECCCC--ceEecccCCEEEEEE
Confidence 011111222222 33688999998766 4444444 334332 2221 222222334455554
Q ss_pred EEcCCCCCeEEEeeCC-----CceEEEEeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEE
Q psy4510 521 HWHPQLPGTIISTANS-----GFNIFRTISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRT 595 (812)
Q Consensus 521 ~~~p~~~~~~i~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~ 595 (812)
.. +++ ..++..+.. ....+..+.+.. .. ....+ ...+.+.......+.|
T Consensus 370 ~~-~d~-~~i~f~~~~~~~~~~~~~ly~v~~~g---~~--~~~~l-------------------t~~~~~~~~~~~~~~~ 423 (740)
T 4a5s_A 370 EA-LTS-DYLYYISNEYKGMPGGRNLYKIQLID---YT--KVTCL-------------------SCELNPERCQYYSVSF 423 (740)
T ss_dssp EE-ECS-SEEEEEESCGGGCTTCBEEEEEETTE---EE--EEEES-------------------STTTSTTTBCBEEEEE
T ss_pred EE-EeC-CEEEEEEecCCCCCceeEEEEEECCC---CC--cceee-------------------ccccCCCCCceEEEEE
Confidence 32 332 344443332 112222222211 00 00000 0000112346778999
Q ss_pred eccCCeEEEEeec-CcceEEEEeccccc
Q psy4510 596 CQYGSTTLAGVWG-EVGKVGIWDLKTAL 622 (812)
Q Consensus 596 s~~g~~l~~~~~~-~dg~I~iwd~~~~~ 622 (812)
||++++++..+.+ .-..+.+++..+++
T Consensus 424 S~dg~~~~~~~s~~~~p~~~l~~~~~~~ 451 (740)
T 4a5s_A 424 SKEAKYYQLRCSGPGLPLYTLHSSVNDK 451 (740)
T ss_dssp CTTSSEEEEEECSBSSCEEEEEETTTTE
T ss_pred CCCCCEEEEEeCCCCCCEEEEEECCCCc
Confidence 9999987766422 12367788876543
No 162
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=5.3e-17 Score=171.14 Aligned_cols=156 Identities=10% Similarity=0.024 Sum_probs=110.8
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC-CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
++++++++ .++++++.++.|++||+.++. ....+..+. ..+..++|+|+++.+++++..++.|.+||+.++.
T Consensus 4 g~~~~~~~-~~~v~~~~~~~v~~~d~~~~~----~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~-- 76 (349)
T 1jmx_B 4 GPALKAGH-EYMIVTNYPNNLHVVDVASDT----VYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK-- 76 (349)
T ss_dssp CCCCCTTC-EEEEEEETTTEEEEEETTTTE----EEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE--
T ss_pred cccccCCC-EEEEEeCCCCeEEEEECCCCc----EEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc--
Confidence 35677776 789999999999999998875 233333222 2578999999998767777789999999998532
Q ss_pred cceeecCCcC-----CCCeEEEEEcCCCCEEEEEeCC------------CcEEEEecCCCCCCCceEEcccCCCCEEEEE
Q psy4510 356 SCMLTLPNAH-----TSDVNVISWNRTEPLIVSGGDD------------GCIHVWDLRRFKKGSSVATFKHHTAPVTTVE 418 (812)
Q Consensus 356 ~~~~~~~~~~-----~~~v~~l~~~~~~~~l~sg~~d------------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~ 418 (812)
.+..+...+ ...+..++|+|+|++|++++.+ +.|.+||+...+....+..+.. ...+.+++
T Consensus 77 -~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 77 -NTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp -EEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC-CSSCCCEE
T ss_pred -EEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC-CCccccee
Confidence 333332222 2347889999999988888865 8999999975322333444443 34688999
Q ss_pred EccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 419 WHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 419 ~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
|+|++. +++ ++ +.|.+||+.+.+
T Consensus 155 ~s~dg~-l~~-~~--~~i~~~d~~~~~ 177 (349)
T 1jmx_B 155 AADDGS-LYV-AG--PDIYKMDVKTGK 177 (349)
T ss_dssp ECTTSC-EEE-ES--SSEEEECTTTCC
T ss_pred ECCCCc-EEE-cc--CcEEEEeCCCCc
Confidence 999985 444 43 449999998764
No 163
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.74 E-value=1.2e-16 Score=171.26 Aligned_cols=285 Identities=9% Similarity=-0.012 Sum_probs=182.5
Q ss_pred cCCCCCceEE-----EEeCCCCCCeEEEecC-CCc--EEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC
Q psy4510 172 FSGHLTEGFA-----MDWSSTEPGVLATGDC-KRN--IHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD 243 (812)
Q Consensus 172 ~~gh~~~i~~-----~~~sp~~~~~lat~~~-dg~--v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~ 243 (812)
++.|...... .+||| +|+.||.++. +|. |.+||+.+++ ......++...+..++|+|+++.|+.++.
T Consensus 26 lt~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~g~~~l~~~d~~~g~----~~~lt~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 26 LTPPDVTCHRNYFYQKCFTR-DGSKLLFGGAFDGPWNYYLLDLNTQV----ATQLTEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp CSCTTSCEECCCTTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTCE----EEECCCSSCBCSSSCEECTTSSEEEEEET
T ss_pred ecCCcccccchhhcCccCCC-CCCEEEEEEcCCCCceEEEEeCCCCc----eEEeeeCCCCCccceEEcCCCCEEEEEeC
Confidence 3344444444 78999 9999988876 664 7888887765 44555667777778899999999999999
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEE--ecCCCCCEEEEE----------------------eCCCcEEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMD--WSSTEPGVLATG----------------------DCKRNIHI 299 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~--~sp~~~~~l~sg----------------------~~dg~i~v 299 (812)
++.|++||+.++ +....+..+...+.... ++|++ .+++.. +.+..|.+
T Consensus 101 ~~~l~~~d~~~g-------~~~~~~~~~~~~~~~~~~~~~~dg-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 172 (388)
T 3pe7_A 101 GRNLMRVDLATL-------EENVVYQVPAEWVGYGTWVANSDC-TKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMR 172 (388)
T ss_dssp TTEEEEEETTTC-------CEEEEEECCTTEEEEEEEEECTTS-SEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEE
T ss_pred CCeEEEEECCCC-------cceeeeechhhcccccceeECCCC-CeeccccccCcccccccccchhhhhhccCCcceEEE
Confidence 999999999986 44444455555554444 48888 565532 23468999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcC-CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCC-CCeEE
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHT-SDVNV 371 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~ 371 (812)
||+.++. ...+..+...+..++|+| +++. |+.++.+ ..|.++|+.... ...+...+. ..+..
T Consensus 173 ~d~~~g~-----~~~l~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~ 242 (388)
T 3pe7_A 173 VDLKTGE-----STVILQENQWLGHPIYRPYDDST-VAFCHEGPHDLVDARMWLINEDGTN----MRKVKTHAEGESCTH 242 (388)
T ss_dssp EETTTCC-----EEEEEEESSCEEEEEEETTEEEE-EEEEECSCTTTSSCSEEEEETTSCC----CEESCCCCTTEEEEE
T ss_pred EECCCCc-----eEEeecCCccccccEECCCCCCE-EEEEEecCCCCCcceEEEEeCCCCc----eEEeeeCCCCccccc
Confidence 9998875 334445667899999999 9985 5555543 377888876322 233322222 35788
Q ss_pred EEEcCCCCEEEEEe-CCC----cEEEEecCCCCCCCceEEcccCCCC---EEEEEEccCCCcEEEEE--------ECCCC
Q psy4510 372 ISWNRTEPLIVSGG-DDG----CIHVWDLRRFKKGSSVATFKHHTAP---VTTVEWHPTESSTFASG--------GADDQ 435 (812)
Q Consensus 372 l~~~~~~~~l~sg~-~dg----~i~iwd~~~~~~~~~~~~~~~h~~~---v~~v~~~p~~~~~l~s~--------~~dg~ 435 (812)
++|+|+|+.|+..+ .++ .|.+||+...+ ...+..+.++... ...+.|+|++..++++. ..+..
T Consensus 243 ~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~-~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 321 (388)
T 3pe7_A 243 EFWVPDGSALVYVSYLKGSPDRFIYSADPETLE-NRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPF 321 (388)
T ss_dssp EEECTTSSCEEEEEEETTCCCEEEEEECTTTCC-EEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCE
T ss_pred ceECCCCCEEEEEecCCCCCcceEEEEecCCCc-eEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCE
Confidence 99999999554433 222 39999997421 1123333321000 11236999986444433 44668
Q ss_pred EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC-----------ceeEEEEcCCCCCEEEEEeCCC-eEEE
Q psy4510 436 IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK-----------EIKELHWHPQLPGTIISTANSG-FNIF 497 (812)
Q Consensus 436 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~v~~~~~~p~~~~~~~~~~~~~-~~~~ 497 (812)
|.+||+...+ +.....+.. .+..++|+|++..+++++..++ ..+|
T Consensus 322 i~~~d~~~~~-----------------~~~l~~~~~~~~~~~~~~~~~~~~~~~spDg~~l~~~s~~~g~~~l~ 378 (388)
T 3pe7_A 322 LYVFNMKNGT-----------------QHRVARHDTSWKVFEGDRQVTHPHPSFTPDDKQILFTSDVHGKPALY 378 (388)
T ss_dssp EEEEETTTTE-----------------EEEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEE
T ss_pred EEEEeccCCc-----------------eEEeccccCcccccccccccCCCCccCCCCCCEEEEEecCCCceeEE
Confidence 9999998763 222222222 4778899999877776665444 3444
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.73 E-value=1.6e-16 Score=168.48 Aligned_cols=251 Identities=10% Similarity=-0.036 Sum_probs=165.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccC-CCCcccccccccCCCCCCeeeeeEcCCCCc--EEEee-----------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-EAGAWQVDQKPLGGHTNSAEDLQWSDLKTA--LQTVD----------- 242 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~-~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~--l~s~~----------- 242 (812)
..+..++|+| ++++|++++.+ .|.+|++. +++... ......+ +.+.+++|+|+|++ +++++
T Consensus 40 ~~~~~~a~sp-dg~~l~~~~~~-~v~~~~~~~~g~~~~--~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~ 114 (365)
T 1jof_A 40 EPISWMTFDH-ERKNIYGAAMK-KWSSFAVKSPTEIVH--EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPF 114 (365)
T ss_dssp CCCSEEEECT-TSSEEEEEEBT-EEEEEEEEETTEEEE--EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEE
T ss_pred CCCcEEEECC-CCCEEEEEccc-eEEEEEECCCCCEEE--eeEeecC-CCCccEEECCCCCEEEEEEecCCcceecccee
Confidence 4567799999 99999998887 99999987 443211 1111111 23667999999994 55553
Q ss_pred --CCCceEEeeCCCCCCCCCCCCCceEEc----CCCCcEEEEEecCCCCCEEEEEe-CCCcEEEEeCC-CCCcceecccc
Q psy4510 243 --DPFQLAEHNKKRGKGPGIPTPPLFSFS----GHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPR-EAGAWQVDQKP 314 (812)
Q Consensus 243 --~d~~i~vwd~~~~~~~~~~~~~~~~~~----~h~~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~-~~~~~~~~~~~ 314 (812)
.++.+.+|++... .+....+. .+...+.+++|+|++ .+|++++ .++.|++|++. ++... ....
T Consensus 115 ~~~~g~v~v~~~~~~------g~~~~~~~~~~~~~~~~~~~~~~spdG-~~l~~~~~~~~~v~~~~~~~~g~~~--~~~~ 185 (365)
T 1jof_A 115 YKFAGYGNVFSVSET------GKLEKNVQNYEYQENTGIHGMVFDPTE-TYLYSADLTANKLWTHRKLASGEVE--LVGS 185 (365)
T ss_dssp SSSCCEEEEEEECTT------CCEEEEEEEEECCTTCCEEEEEECTTS-SEEEEEETTTTEEEEEEECTTSCEE--EEEE
T ss_pred ecCCceEEEEccCCC------CcCcceEeeEEeCCCCcceEEEECCCC-CEEEEEcCCCCEEEEEEECCCCCEE--Eeee
Confidence 6889999999742 12222222 255679999999999 6666655 46799999998 55421 1112
Q ss_pred cc--CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCC--CCcc---cceeecCC---cCCC------CeEEEE-EcCC
Q psy4510 315 LV--GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRV--INTK---SCMLTLPN---AHTS------DVNVIS-WNRT 377 (812)
Q Consensus 315 ~~--~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~--~~~~---~~~~~~~~---~~~~------~v~~l~-~~~~ 377 (812)
+. .|...+..++|+|+++.++++...++.|.+|++.. +... ..+..++. +|.. .+..++ |+|+
T Consensus 186 ~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spd 265 (365)
T 1jof_A 186 VDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFS 265 (365)
T ss_dssp EECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTT
T ss_pred EecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCC
Confidence 22 24567999999999996444444578999998753 2110 01122211 1222 488999 9999
Q ss_pred CCEEEEEeCC-C-----cEEEEecCCCCCCCceE---EcccCCCCEEEEEEcc---CCCcEEEEEEC-CCCEEEEEcCCC
Q psy4510 378 EPLIVSGGDD-G-----CIHVWDLRRFKKGSSVA---TFKHHTAPVTTVEWHP---TESSTFASGGA-DDQIALWDLAVE 444 (812)
Q Consensus 378 ~~~l~sg~~d-g-----~i~iwd~~~~~~~~~~~---~~~~h~~~v~~v~~~p---~~~~~l~s~~~-dg~v~iwd~~~~ 444 (812)
|++|+++..+ . .|.+|++.. .++... ....+...+..++|+| ++ ++|++++. ++.|.+|++...
T Consensus 266 G~~l~v~~~~~~~~~~~~i~v~~~~~--~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg-~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 266 GKYMFASSRANKFELQGYIAGFKLRD--CGSIEKQLFLSPTPTSGGHSNAVSPCPWSD-EWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SSEEEEEEEESSTTSCCEEEEEEECT--TSCEEEEEEEEECSSCCTTCCCEEECTTCT-TEEEEECSSSCEEEEEEEETT
T ss_pred CCEEEEECCCCCCCCCCeEEEEEECC--CCCEEEeeeeeecCCCCcccceecCCCcCC-CEEEEEEcCCCeEEEEEEchh
Confidence 9987766543 2 899999963 233322 2333455567889999 66 57777776 489999998654
No 165
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.71 E-value=8.9e-16 Score=161.72 Aligned_cols=234 Identities=10% Similarity=-0.010 Sum_probs=160.2
Q ss_pred eeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 228 DLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 228 ~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
.++++++++++++++.++.|.+||..++ +.+..+..+. ..+..++|+|++..+++++..++.|.+||+.++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~-------~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~ 76 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASD-------TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCK 76 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTT-------EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCC-------cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCc
Confidence 4567788999999999999999999875 5555665443 2577999999994355666778999999998775
Q ss_pred cceecccccc-CC-----CCCEEEEEEcCCCCeEEEEEECC------------CeEEEEECCCCCcccceeecCCcCCCC
Q psy4510 307 AWQVDQKPLV-GH-----TNSVEDLQWSPGEKRVLASCSVD------------LSIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 307 ~~~~~~~~~~-~h-----~~~v~~~~~~p~~~~~l~s~~~d------------g~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
. ...+. .+ ...+.+++|+|+++. |++++.+ +.|.+||+.++.....+... .+...
T Consensus 77 ~----~~~~~~~~~~~~~~~~~~~~~~spdg~~-l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~--~~~~~ 149 (349)
T 1jmx_B 77 N----TFHANLSSVPGEVGRSMYSFAISPDGKE-VYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTF--PMPRQ 149 (349)
T ss_dssp E----EEEEESCCSTTEEEECSSCEEECTTSSE-EEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEE--ECCSS
T ss_pred E----EEEEEcccccccccccccceEECCCCCE-EEEEcccccccccccccCCCeEEEEECCCccccceeeec--cCCCc
Confidence 2 22222 12 234789999999995 5665544 89999999854323323332 23346
Q ss_pred eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC--------------------------------------
Q psy4510 369 VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------------------------------------- 410 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------------------------------------- 410 (812)
+.+++|+|+++ +++++. .|.+||+.. ++.+..+..+
T Consensus 150 ~~~~~~s~dg~-l~~~~~--~i~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 223 (349)
T 1jmx_B 150 VYLMRAADDGS-LYVAGP--DIYKMDVKT---GKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDK 223 (349)
T ss_dssp CCCEEECTTSC-EEEESS--SEEEECTTT---CCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC----
T ss_pred ccceeECCCCc-EEEccC--cEEEEeCCC---CceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCc
Confidence 88999999999 555543 499999874 3333333222
Q ss_pred ------------------------------CCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 411 ------------------------------TAPVTTVEWHP-TESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 411 ------------------------------~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
...+.+++|+| ++ .+++++ ++.|.+||+.+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg-~~l~~~--~~~v~~~d~~~~~-------------- 286 (349)
T 1jmx_B 224 QDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDP-NQIYGV--LNRLAKYDLKQRK-------------- 286 (349)
T ss_dssp ---CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCT-TEEEEE--ESEEEEEETTTTE--------------
T ss_pred CCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCC-CEEEEE--cCeEEEEECccCe--------------
Confidence 12456778889 86 466666 7899999998763
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
..........+..++|+|++..++++...+.+.+|+...
T Consensus 287 ---~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 287 ---LIKAANLDHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp ---EEEEEECSSCCCEEEECSSSSCEEEESBSSEEEEEETTT
T ss_pred ---EEEEEcCCCCccceEECCCCCEEEEecCCCeEEEEeccc
Confidence 322222334578999999988777755454566665433
No 166
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.70 E-value=1.3e-15 Score=175.62 Aligned_cols=210 Identities=9% Similarity=-0.024 Sum_probs=142.7
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEEe--eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE---------EEEec--CC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQTV--DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF---------AMDWS--ST 283 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s~--~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~---------~l~~s--p~ 283 (812)
..+.+|...|..++|++++-++++. +.++...||....+ .....+..|...+. ...|+ |+
T Consensus 17 ~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~-------~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPD 89 (662)
T 3azo_A 17 ALVASRSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRAD-------GAEESALPAPWNVRNRVFEYSGFPWAGVPRPA 89 (662)
T ss_dssp HHHHHTCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTT-------SCEEESSCTTCCBCCCGGGTCCCCEEEECCSS
T ss_pred HHHhhcCCccceeEEcCCeEEEEecCcccCCcEEEEEECCC-------CCcceeCCCCccccccccccCCccceeeeecC
Confidence 4567899999999999887666766 56788999986432 34556666665555 56665 99
Q ss_pred CCCEEEEEe-CCCcEEEEeCC--C-CCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEECC----------CeE
Q psy4510 284 EPGVLATGD-CKRNIHIWTPR--E-AGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCSVD----------LSI 344 (812)
Q Consensus 284 ~~~~l~sg~-~dg~i~vwd~~--~-~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~d----------g~i 344 (812)
+..+|+.++ .+..|.++++. . +. ...+.. |...+.+++|+|+|+. |++++.+ ..|
T Consensus 90 g~~~la~~~~~~~~l~~~~~~~~g~~~-----~~~l~~~~~~~~~~~~~~~~~spDg~~-l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 90 GGPLLVFTHFGDQRLYAFEPDAPGGAV-----PRPLTPVSAVGGGLRWADPVLLPERGE-VWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp SSCEEEEEBTTTCCEEEECTTSTTCCC-----CEECSCCCCSTTCEEEEEEEEETTTTE-EEEEEEEECSSSTTCEEEEE
T ss_pred CCeEEEEEECCCCeEEEEcCCCCCCCC-----CEeccCCccCCCCccccCcEECCCCCE-EEEEEecccCCCCCCceeEE
Confidence 944155443 46677777765 2 32 233444 6678899999999995 6666665 589
Q ss_pred EEEECCCCC--cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC--------CcEEEEecCCCCCC---CceEEcccCC
Q psy4510 345 RIWDTRVIN--TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--------GCIHVWDLRRFKKG---SSVATFKHHT 411 (812)
Q Consensus 345 ~iwd~~~~~--~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--------g~i~iwd~~~~~~~---~~~~~~~~h~ 411 (812)
++||+.... .......+...+...+..++|+|+|++|+.++.+ ..|++||+.. .+ ........|.
T Consensus 164 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~--~g~~~~~~~l~~~~~ 241 (662)
T 3azo_A 164 AAVPLDGSAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE--DGRFADTRTLLGGPE 241 (662)
T ss_dssp EEEETTSTTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT--TSCEEEEEEEEEETT
T ss_pred EEEECCCCccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC--CCcccccEEeCCCCC
Confidence 999997510 0012233321445678889999999988877754 3799999972 12 3333344567
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..+..+.|+|++. ++++++.++..+||.+.
T Consensus 242 ~~~~~~~~spdg~-l~~~~~~~~~~~l~~~~ 271 (662)
T 3azo_A 242 EAIAQAEWAPDGS-LIVATDRTGWWNLHRVD 271 (662)
T ss_dssp BCEEEEEECTTSC-EEEEECTTSSCEEEEEC
T ss_pred ceEcceEECCCCe-EEEEECCCCCeEEEEEE
Confidence 8899999999985 88888888855555443
No 167
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.69 E-value=7.9e-16 Score=165.31 Aligned_cols=293 Identities=11% Similarity=0.074 Sum_probs=172.4
Q ss_pred CEEEEEEcCCCCeEEEEEECC--CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVD--LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~d--g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
.+.+++|+|+|+.++++...+ ..|.+||+..+. ...+...+......+.|+|+|+.|+.++.++.|++||+..
T Consensus 37 ~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~- 111 (396)
T 3c5m_A 37 YFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQ----AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLET- 111 (396)
T ss_dssp CTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTE----EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTT-
T ss_pred eeecCcCCCCCCEEEEEEecCCCceEEEEECCCCc----EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCC-
Confidence 377889999999644444443 368888987432 2233233333333478999999999999999999999973
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEE
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHW 478 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 478 (812)
+........+.. |+|++ ..|+..+.+....+|.. .+.|
T Consensus 112 --~~~~~~~~~~~~------~~~~g-~~l~~~~~~~~~~~~~~---------------------------------~~~~ 149 (396)
T 3c5m_A 112 --LEEQVIYTVDEE------WKGYG-TWVANSDCTKLVGIEIL---------------------------------KRDW 149 (396)
T ss_dssp --CCEEEEEECCTT------EEEEE-EEEECTTSSEEEEEEEE---------------------------------GGGC
T ss_pred --CCcEEEEecccc------cCCCC-CEEEeccCCcccccccc---------------------------------cccc
Confidence 443333333333 66665 45665555544444431 0123
Q ss_pred cCCCCCEEEEEe---CCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccc
Q psy4510 479 HPQLPGTIISTA---NSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEED 555 (812)
Q Consensus 479 ~p~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~ 555 (812)
+|++..+++... .....+| .+... .+
T Consensus 150 spdg~~~~~~~~~~~~~~~~l~---------------------------------------------~~d~~---~g--- 178 (396)
T 3c5m_A 150 QPLTSWEKFAEFYHTNPTCRLI---------------------------------------------KVDIE---TG--- 178 (396)
T ss_dssp CCCCSHHHHHHHHHTCCCEEEE---------------------------------------------EEETT---TC---
T ss_pred CCCCcceeeeeeccCCCcceEE---------------------------------------------EEECC---CC---
Confidence 344322221110 0010110 00000 00
Q ss_pred cccccccccCCCCCCccccCCCccceEEecccceEEEEEEec-cCCeEEEEeecCc----ceEEEEeccccccccCCccc
Q psy4510 556 NERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQ-YGSTTLAGVWGEV----GKVGIWDLKTALQTVDDPFQ 630 (812)
Q Consensus 556 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~-~g~~l~~~~~~~d----g~I~iwd~~~~~~~~~~~~~ 630 (812)
. ...+..+...+..++|+| +++.++..+.+.. ..|.+|++..+.
T Consensus 179 ----------------------~-~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~-------- 227 (396)
T 3c5m_A 179 ----------------------E-LEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSN-------- 227 (396)
T ss_dssp ----------------------C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCC--------
T ss_pred ----------------------c-EEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCc--------
Confidence 0 011122344677889999 7887776632222 468888886553
Q ss_pred ccccccccCCCCCCCCCCeeeecCC--CCceEEEEeCCCCCCeEEecCCC-----ceEEEEecCCCceeEE-------EE
Q psy4510 631 LAEHNKKRGKGPGIPTPPLFSFSGH--LTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWSV-------YL 696 (812)
Q Consensus 631 ~~~~~~~~~~~~~~~~~~~~~~~gh--~~~V~~l~~sp~~~~~las~s~D-----g~v~iWd~~~~~~~~~-------~~ 696 (812)
...+..+ ...+..++|+| +++.|+.++.+ +.|.+||+.+++...+ ..
T Consensus 228 ------------------~~~l~~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~ 288 (396)
T 3c5m_A 228 ------------------VRKIKEHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHL 288 (396)
T ss_dssp ------------------CEESSCCCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEE
T ss_pred ------------------eeEeeccCCCccccceEECC-CCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCC
Confidence 1122222 23688899999 77777666543 5599999988754332 46
Q ss_pred ecC-CCCEEEeec----------------CCCeEEEeecCCCCCcccccccccCCCc-----------ceeEeEEecCCc
Q psy4510 697 YTN-RFGVLATGD----------------CKRNIHIWTPREAGAWQVDQKPLVGHTN-----------SVEDLQWSPGEK 748 (812)
Q Consensus 697 ~s~-dg~~lasgs----------------~dg~i~iwd~~~~~~~~~~~~~~~gH~~-----------~V~~l~fs~dg~ 748 (812)
++| ||++|++++ .++.|++||+.+++. ..+..|.. .+..++|+|||+
T Consensus 289 ~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~-----~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 363 (396)
T 3c5m_A 289 MSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA-----QKLCKHSTSWDVLDGDRQITHPHPSFTPNDD 363 (396)
T ss_dssp EECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC-----CEEEECCCCCCCBTTBSSTTCCCCEECTTSS
T ss_pred ccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce-----EEccCCCCccccccccccCCCCCceEccCCC
Confidence 788 999888754 347899999987752 34555544 267789999999
Q ss_pred eeEEeeccCCceEEeeec
Q psy4510 749 RVLASCSVDRSNRIGARR 766 (812)
Q Consensus 749 ~~L~s~s~Dg~i~iWd~~ 766 (812)
++++++..++...||.+.
T Consensus 364 ~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 364 GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp EEEEEECTTSSCEEEEEE
T ss_pred eEEEEecCCCCceEEEEE
Confidence 544444556777777654
No 168
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.68 E-value=1.7e-14 Score=150.25 Aligned_cols=244 Identities=12% Similarity=0.108 Sum_probs=180.7
Q ss_pred CCceEEEEeCCCCCCeEEEecCC------------------------CcEEEEccCCCCccccccccc-CCCCCCeeeee
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCK------------------------RNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQ 230 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~d------------------------g~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~ 230 (812)
.+.+.+++++| +|+++++...+ ++|.+||..+++. ...+ .++-.....++
T Consensus 23 l~~v~~va~d~-~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~----~~~~~~~~~~~p~gia 97 (329)
T 3fvz_A 23 PGQVSGVALDS-KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEI----LQSSGKNLFYLPHGLS 97 (329)
T ss_dssp CSCEEEEEECT-TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCE----EEEECTTTCSSEEEEE
T ss_pred cCCceEEEECC-CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeE----EeccCCCccCCceEEE
Confidence 36799999999 99999988777 4799999887763 2222 24556789999
Q ss_pred EcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE---------cCCCCcEEEEEecC-CCCCEEEEEe-CCCcEEE
Q psy4510 231 WSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF---------SGHLTEGFAMDWSS-TEPGVLATGD-CKRNIHI 299 (812)
Q Consensus 231 ~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~---------~~h~~~v~~l~~sp-~~~~~l~sg~-~dg~i~v 299 (812)
++++|+.+++...++.|++|+.... ...+..+ .++......|+++| ++ .++++.+ .++.|++
T Consensus 98 ~d~~g~l~v~d~~~~~v~~~~~~g~------~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g-~lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 98 IDTDGNYWVTDVALHQVFKLDPHSK------EGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTG-AVFVSDGYCNSRIVQ 170 (329)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCS------SCCSEEESBTTBCCCSTTCCSSEEEEEECTTTC-CEEEEECSSCCEEEE
T ss_pred ECCCCCEEEEECCCCEEEEEeCCCC------eEEEEEecccCCCCCCccccCCCcEEEEeCCCC-eEEEEeCCCCCeEEE
Confidence 9999998888888999999998652 2255555 34555789999999 55 6777775 6899999
Q ss_pred EeCCCCCcceecccccc----------CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLV----------GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSD 368 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~----------~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~ 368 (812)
|+.. +. ....+. ++......++++|++..++++...++.|++|+..++. .+..+. ..+...
T Consensus 171 ~~~~-g~----~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~---~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 171 FSPS-GK----FVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKE---FVREIKHASFGRN 242 (329)
T ss_dssp ECTT-SC----EEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCC---EEEEECCTTTTTC
T ss_pred EcCC-CC----EEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCc---EEEEEeccccCCC
Confidence 9943 33 122221 2234589999999955588888899999999997432 333331 345677
Q ss_pred eEEEEEcCCCCEEEEE-------eCCCcEEEEecCCCCCCCceEEc---ccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 369 VNVISWNRTEPLIVSG-------GDDGCIHVWDLRRFKKGSSVATF---KHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg-------~~dg~i~iwd~~~~~~~~~~~~~---~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+..++|+| +..+++. ..+..|++||+. .++.+..+ ..+...+.+|+++|++ .++++...+++|++
T Consensus 243 ~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~---~g~~~~~~~~~~~~~~~p~~ia~~~dG-~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 243 VFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFS---SGEIIDVFKPVRKHFDMPHDIVASEDG-TVYIGDAHTNTVWK 317 (329)
T ss_dssp EEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETT---TCCEEEEECCSSSCCSSEEEEEECTTS-EEEEEESSSCCEEE
T ss_pred cceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcC---CCeEEEEEcCCCCccCCeeEEEECCCC-CEEEEECCCCEEEE
Confidence 88999999 4333333 334589999987 46677776 3567789999999998 78888888999999
Q ss_pred EEcCCC
Q psy4510 439 WDLAVE 444 (812)
Q Consensus 439 wd~~~~ 444 (812)
|++...
T Consensus 318 ~~~~~~ 323 (329)
T 3fvz_A 318 FTLTEK 323 (329)
T ss_dssp EEEEEC
T ss_pred EeCCcc
Confidence 998654
No 169
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.67 E-value=1e-14 Score=168.09 Aligned_cols=246 Identities=10% Similarity=-0.035 Sum_probs=170.3
Q ss_pred CcCCCCCceEEEEeCCCCCCeEEEe--cCCCcEEEEccCCCCcccccccccCCCCCCee---------eeeEc--CCCCc
Q psy4510 171 SFSGHLTEGFAMDWSSTEPGVLATG--DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAE---------DLQWS--DLKTA 237 (812)
Q Consensus 171 ~~~gh~~~i~~~~~sp~~~~~lat~--~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~---------~l~~s--~~~~~ 237 (812)
.+.+|...+..++|++ ++-++++. +.++...||....+. ..+.+..|...+. ..+|+ |||++
T Consensus 18 ~~~~~~~~~~~~~~s~-~~~~~~~~~~~~~~~~~l~~~~~~~----~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~ 92 (662)
T 3azo_A 18 LVASRSGRPACVGAVG-DEVWWVAPRPAEAGRATLVRRRADG----AEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGP 92 (662)
T ss_dssp HHHHTCSCCEEEEEET-TEEEEEEEETTTTTEEEEEEECTTS----CEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSC
T ss_pred HHhhcCCccceeEEcC-CeEEEEecCcccCCcEEEEEECCCC----CcceeCCCCccccccccccCCccceeeeecCCCe
Confidence 3457888999999999 87777777 668899999864443 3445666666666 66666 99999
Q ss_pred -EEEeeC-CCceEEeeCC--C-CCCCCCCCCCceEEcC-----CCCcEEEEEecCCCCCEEEEEeCC----------CcE
Q psy4510 238 -LQTVDD-PFQLAEHNKK--R-GKGPGIPTPPLFSFSG-----HLTEGFAMDWSSTEPGVLATGDCK----------RNI 297 (812)
Q Consensus 238 -l~s~~~-d~~i~vwd~~--~-~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp~~~~~l~sg~~d----------g~i 297 (812)
|+.++. +..|.++++. . + ....+.. |...+.+++|+|+| ..|++++.+ ..|
T Consensus 93 ~la~~~~~~~~l~~~~~~~~g~~--------~~~~l~~~~~~~~~~~~~~~~~spDg-~~l~~~~~~~~~~~~~~~~~~i 163 (662)
T 3azo_A 93 LLVFTHFGDQRLYAFEPDAPGGA--------VPRPLTPVSAVGGGLRWADPVLLPER-GEVWCMAEEFTGEGPSDVRRFL 163 (662)
T ss_dssp EEEEEBTTTCCEEEECTTSTTCC--------CCEECSCCCCSTTCEEEEEEEEETTT-TEEEEEEEEECSSSTTCEEEEE
T ss_pred EEEEEECCCCeEEEEcCCCCCCC--------CCEeccCCccCCCCccccCcEECCCC-CEEEEEEecccCCCCCCceeEE
Confidence 776654 4556666655 2 2 2334444 66788999999999 677777766 589
Q ss_pred EEEeCCC------CCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECC-CCCcccceeec
Q psy4510 298 HIWTPRE------AGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTR-VINTKSCMLTL 361 (812)
Q Consensus 298 ~vwd~~~------~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~-~~~~~~~~~~~ 361 (812)
++|++.+ +. ...+. .+...+..++|+|+|+. |+.++.+ ..|++||+. ++.. .....+
T Consensus 164 ~~~~~~~~~~~~~~~-----~~~l~~~~~~~~~~~~~SpDG~~-la~~~~~~~~~~~~~~~i~~~d~~~~g~~-~~~~~l 236 (662)
T 3azo_A 164 AAVPLDGSAAADRSA-----VRELSDDAHRFVTGPRLSPDGRQ-AVWLAWDHPRMPWEGTELKTARVTEDGRF-ADTRTL 236 (662)
T ss_dssp EEEETTSTTTTCGGG-----SEESSCSCSSEECCCEECTTSSE-EEEEEECTTCCTTTCEEEEEEEECTTSCE-EEEEEE
T ss_pred EEEECCCCccccCCc-----eeEEEecCCCcccCceECCCCCE-EEEEECCCCCCCCCCcEEEEEEECCCCcc-cccEEe
Confidence 9999987 33 33444 55678889999999995 6655544 479999997 3311 123333
Q ss_pred CCcCCCCeEEEEEcCCCCEEEEEeCCC--cEEEEecCCCCCCCceEEcccCCCC--------EEEEEEccCCCcEEEEEE
Q psy4510 362 PNAHTSDVNVISWNRTEPLIVSGGDDG--CIHVWDLRRFKKGSSVATFKHHTAP--------VTTVEWHPTESSTFASGG 431 (812)
Q Consensus 362 ~~~~~~~v~~l~~~~~~~~l~sg~~dg--~i~iwd~~~~~~~~~~~~~~~h~~~--------v~~v~~~p~~~~~l~s~~ 431 (812)
...|...+..++|+|+|++++++..++ .|.+||+. .++.......+... +.+++|+|++ .++++++
T Consensus 237 ~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~---~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~-~~~~~~~ 312 (662)
T 3azo_A 237 LGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPA---TGAATQLCRREEEFAGPLWTPGMRWFAPLANG-LIAVVHG 312 (662)
T ss_dssp EEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTT---TCCEEESSCCSSBSSCCCCSTTCCSEEECTTS-CEEEEEB
T ss_pred CCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECC---CCceeecccccccccCccccccCceEeEeCCC-EEEEEEE
Confidence 345678899999999999888888888 55555653 23332222222221 4678888886 6888888
Q ss_pred CCCCEEEEEcC
Q psy4510 432 ADDQIALWDLA 442 (812)
Q Consensus 432 ~dg~v~iwd~~ 442 (812)
. +.++||.+.
T Consensus 313 ~-~~~~l~~~d 322 (662)
T 3azo_A 313 K-GAAVLGILD 322 (662)
T ss_dssp S-SSCEEEEEE
T ss_pred c-CccEEEEEE
Confidence 8 999999543
No 170
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=5.9e-14 Score=143.11 Aligned_cols=244 Identities=8% Similarity=0.072 Sum_probs=175.6
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc--cccCCCCCCeeeeeE-cCCCCcEEEeeC-CCceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ--KPLGGHTNSAEDLQW-SDLKTALQTVDD-PFQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~--~~l~~h~~~V~~l~~-s~~~~~l~s~~~-d~~i~v 249 (812)
++...+.+++++| +++++++...++.|++|+..... ..... ....+|...+.++++ .++++.+++... ++.|.+
T Consensus 27 g~~~~p~~v~~~~-~g~l~v~~~~~~~i~~~d~~g~~-~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~ 104 (286)
T 1q7f_A 27 GQFTEPSGVAVNA-QNDIIVADTNNHRIQIFDKEGRF-KFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQI 104 (286)
T ss_dssp TCBSCEEEEEECT-TCCEEEEEGGGTEEEEECTTSCE-EEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEE
T ss_pred CccCCCceEEECC-CCCEEEEECCCCEEEEECCCCcE-EEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEE
Confidence 5667899999999 99999998889999999987321 11000 011245567899999 467766666543 789999
Q ss_pred eeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc--cCCCCCEEEEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQ 326 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--~~h~~~v~~~~ 326 (812)
|+... +.+..+. .+...+.+++++|++ .++++...++.|.+|+..... ...+ .++...+..++
T Consensus 105 ~d~~g--------~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~g~~-----~~~~~~~~~~~~p~~i~ 170 (286)
T 1q7f_A 105 YNQYG--------QFVRKFGATILQHPRGVTVDNKG-RIIVVECKVMRVIIFDQNGNV-----LHKFGCSKHLEFPNGVV 170 (286)
T ss_dssp ECTTS--------CEEEEECTTTCSCEEEEEECTTS-CEEEEETTTTEEEEECTTSCE-----EEEEECTTTCSSEEEEE
T ss_pred ECCCC--------cEEEEecCccCCCceEEEEeCCC-CEEEEECCCCEEEEEcCCCCE-----EEEeCCCCccCCcEEEE
Confidence 99433 4444443 344678999999998 677877778999999965321 2222 24456789999
Q ss_pred EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCCCCce
Q psy4510 327 WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFKKGSSV 404 (812)
Q Consensus 327 ~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~~~ 404 (812)
++|++. ++++.+.++.|++||... ..+..+. .++...+..++++++|+++++...++ .|.+||.. ++.+
T Consensus 171 ~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~----g~~~ 241 (286)
T 1q7f_A 171 VNDKQE-IFISDNRAHCVKVFNYEG----QYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD----GQLI 241 (286)
T ss_dssp ECSSSE-EEEEEGGGTEEEEEETTC----CEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT----SCEE
T ss_pred ECCCCC-EEEEECCCCEEEEEcCCC----CEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC----CCEE
Confidence 999987 788878899999999752 2233331 12236789999999999888887776 99999963 5566
Q ss_pred EEcccCCC--CEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 405 ATFKHHTA--PVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 405 ~~~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+..+.. .+.+++++|++ +++++ +.+++|++|++...
T Consensus 242 ~~~~~~~~~~~~~~i~~~~~g-~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 242 SALESKVKHAQCFDVALMDDG-SVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEEESSCCSCEEEEEEETTT-EEEEE-ETTTEEEEEECSCC
T ss_pred EEEcccCCCCcceeEEECCCC-cEEEE-CCCCeEEEEEcccc
Confidence 66655433 47899999987 56666 67999999998654
No 171
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.66 E-value=2.1e-14 Score=152.18 Aligned_cols=284 Identities=8% Similarity=-0.021 Sum_probs=169.9
Q ss_pred eEEEecCC--CcEEEEccCCCCccccccccc-CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC-CCCCCCCCCCCce
Q psy4510 191 VLATGDCK--RNIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK-RGKGPGIPTPPLF 266 (812)
Q Consensus 191 ~lat~~~d--g~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~-~~~~~~~~~~~~~ 266 (812)
.|++|+.. +.|.+|+++............ ......+..++|+|++++|++++.+ .|.+|++. ++ +...
T Consensus 4 ~~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g-------~~~~ 75 (365)
T 1jof_A 4 HLMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPT-------EIVH 75 (365)
T ss_dssp EEEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETT-------EEEE
T ss_pred EEEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCC-------CEEE
Confidence 34555442 468887764322111111111 1344578899999999999998887 99999987 53 2222
Q ss_pred EE--cCCCCcEEEEEecCCCCC-EEEEEe-------------CCCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcC
Q psy4510 267 SF--SGHLTEGFAMDWSSTEPG-VLATGD-------------CKRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSP 329 (812)
Q Consensus 267 ~~--~~h~~~v~~l~~sp~~~~-~l~sg~-------------~dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p 329 (812)
.. ..+ +...+++|+|++.. ++++++ .+|.+.+|++...+........+ ..+...+.+++|+|
T Consensus 76 ~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~sp 154 (365)
T 1jof_A 76 EASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDP 154 (365)
T ss_dssp EEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECT
T ss_pred eeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECC
Confidence 21 111 23556899999832 345553 68999999997533211111111 12456799999999
Q ss_pred CCCeEEEEEECCCeEEEEECC-CCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCc---
Q psy4510 330 GEKRVLASCSVDLSIRIWDTR-VINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSS--- 403 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~--- 403 (812)
+|+.++++...++.|++|++. ++.. ..+..+. ..|...+..++|+|+|+++++++. ++.|.+|++... .++.
T Consensus 155 dG~~l~~~~~~~~~v~~~~~~~~g~~-~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~-~g~~~~~ 232 (365)
T 1jof_A 155 TETYLYSADLTANKLWTHRKLASGEV-ELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA-THMPVYT 232 (365)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCE-EEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT-TCCEEEE
T ss_pred CCCEEEEEcCCCCEEEEEEECCCCCE-EEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCC-CCcEEEc
Confidence 999644444357899999997 3321 1122221 124567999999999998877764 789999987531 2222
Q ss_pred ---eEEcc----cCCC------CEEEEE-EccCCCcEEEEEEC-CC-----CEEEEEcCC-CCchhHHHhhhhhccCCCc
Q psy4510 404 ---VATFK----HHTA------PVTTVE-WHPTESSTFASGGA-DD-----QIALWDLAV-ERDSEIEQREAELKDLPSQ 462 (812)
Q Consensus 404 ---~~~~~----~h~~------~v~~v~-~~p~~~~~l~s~~~-dg-----~v~iwd~~~-~~~~~~~~~~~~~~~~~~~ 462 (812)
+..+. +|.. .+..++ |+|++. +|+++.. ++ +|.+|++.. ++.. .
T Consensus 233 ~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~-~l~v~~~~~~~~~~~~i~v~~~~~~g~~~--------------~ 297 (365)
T 1jof_A 233 HHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGK-YMFASSRANKFELQGYIAGFKLRDCGSIE--------------K 297 (365)
T ss_dssp EEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSS-EEEEEEEESSTTSCCEEEEEEECTTSCEE--------------E
T ss_pred cceEEcCCCCcCCcccccccccccccEEEECCCCC-EEEEECCCCCCCCCCeEEEEEECCCCCEE--------------E
Confidence 11222 1222 488999 999985 5555543 23 799999963 3110 1
Q ss_pred eE-EeecCCCceeEEEEcC---CCCCEEEEEeC-CCeEEEEeC
Q psy4510 463 LL-FIHLGQKEIKELHWHP---QLPGTIISTAN-SGFNIFRTI 500 (812)
Q Consensus 463 ~~-~~~~~~~~v~~~~~~p---~~~~~~~~~~~-~~~~~~~~~ 500 (812)
+. ........+..++|+| ++..++++... +.+.+|...
T Consensus 298 ~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~ 340 (365)
T 1jof_A 298 QLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWK 340 (365)
T ss_dssp EEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEE
T ss_pred eeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEc
Confidence 11 1212233567789999 67665555544 345666543
No 172
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.64 E-value=2.6e-15 Score=161.21 Aligned_cols=275 Identities=10% Similarity=0.028 Sum_probs=170.4
Q ss_pred eEEEEeCCCCCCeEEEecC---CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~---dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+..++||| +|++||.... +..|.+|++.+++ ......++......+.|+|+|++|+.++.++.|.+|++.++
T Consensus 38 ~~~~~~Sp-dG~~l~~~~~~~g~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~ 112 (396)
T 3c5m_A 38 FYQKCFTQ-DGKKLLFAGDFDGNRNYYLLNLETQQ----AVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETL 112 (396)
T ss_dssp TTSCCBCT-TSCEEEEEECTTSSCEEEEEETTTTE----EEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTC
T ss_pred eecCcCCC-CCCEEEEEEecCCCceEEEEECCCCc----EEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCC
Confidence 56689999 9998876643 2468888887764 22222333333445889999999999999999999999875
Q ss_pred CCCCCCCCCceEEcCCCCcEEE-------------------EEecCCCCCEEEEE-----eCCCcEEEEeCCCCCcceec
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFA-------------------MDWSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~-------------------l~~sp~~~~~l~sg-----~~dg~i~vwd~~~~~~~~~~ 311 (812)
+.......+...... +.|+|++ ..++.+ ..+..|++||+.++..
T Consensus 113 -------~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg-~~~~~~~~~~~~~~~~l~~~d~~~g~~---- 180 (396)
T 3c5m_A 113 -------EEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLT-SWEKFAEFYHTNPTCRLIKVDIETGEL---- 180 (396)
T ss_dssp -------CEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCC-SHHHHHHHHHTCCCEEEEEEETTTCCE----
T ss_pred -------CcEEEEecccccCCCCCEEEeccCCccccccccccccCCCC-cceeeeeeccCCCcceEEEEECCCCcE----
Confidence 333333333332222 3567777 444433 4567899999987652
Q ss_pred cccccCCCCCEEEEEEcC-CCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEE
Q psy4510 312 QKPLVGHTNSVEDLQWSP-GEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~s 383 (812)
..+..+...+..+.|+| ++.. |+.++.+ ..|.+||+.... ...+.... ...+..++|+|+|+.|+.
T Consensus 181 -~~~~~~~~~~~~~~~sp~dg~~-l~~~~~~~~~~~~~~l~~~d~~~~~----~~~l~~~~~~~~~~~~~~spdg~~l~~ 254 (396)
T 3c5m_A 181 -EVIHQDTAWLGHPIYRPFDDST-VGFCHEGPHDLVDARMWLVNEDGSN----VRKIKEHAEGESCTHEFWIPDGSAMAY 254 (396)
T ss_dssp -EEEEEESSCEEEEEEETTEEEE-EEEEECSCSSSCSCCCEEEETTSCC----CEESSCCCTTEEEEEEEECTTSSCEEE
T ss_pred -EeeccCCcccccceECCCCCCE-EEEEecCCCCCCCceEEEEECCCCc----eeEeeccCCCccccceEECCCCCEEEE
Confidence 22334667899999999 6774 5544443 368888876322 22231211 235788999999996666
Q ss_pred EeCC-----CcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEE----------------CCCCEEEEEc
Q psy4510 384 GGDD-----GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGG----------------ADDQIALWDL 441 (812)
Q Consensus 384 g~~d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~----------------~dg~v~iwd~ 441 (812)
++.+ +.|++||+.. ++... +.... ... +.|+| ++. ++++++ .+..|.+||+
T Consensus 255 ~~~~~~~~~~~l~~~d~~~---g~~~~-l~~~~-~~~-~~~s~~dg~-~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~ 327 (396)
T 3c5m_A 255 VSYFKGQTDRVIYKANPET---LENEE-VMVMP-PCS-HLMSNFDGS-LMVGDGCDAPVDVADADSYNIENDPFLYVLNT 327 (396)
T ss_dssp EEEETTTCCEEEEEECTTT---CCEEE-EEECC-SEE-EEEECSSSS-EEEEEECCC----------CCCCCCEEEEEET
T ss_pred EecCCCCccceEEEEECCC---CCeEE-eeeCC-CCC-CCccCCCCc-eEEEecCCcceeeccccccccCCCCcEEEEec
Confidence 6443 4499999973 32222 22111 233 89999 875 666654 2467999998
Q ss_pred CCCCchhHHHhhhhhccCCCceEEeecCC---------CceeEEEEcCCCCCEEEEEeCCC-eEEEE
Q psy4510 442 AVERDSEIEQREAELKDLPSQLLFIHLGQ---------KEIKELHWHPQLPGTIISTANSG-FNIFR 498 (812)
Q Consensus 442 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~v~~~~~~p~~~~~~~~~~~~~-~~~~~ 498 (812)
..... ..+..+... ..+..+.|+|++..++++...++ ..+|.
T Consensus 328 ~~~~~---------------~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~ 379 (396)
T 3c5m_A 328 KAKSA---------------QKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYI 379 (396)
T ss_dssp TTTBC---------------CEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEE
T ss_pred ccCce---------------EEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEE
Confidence 77632 122222110 02566789999876666654433 34443
No 173
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.63 E-value=2.3e-14 Score=150.95 Aligned_cols=137 Identities=14% Similarity=0.149 Sum_probs=96.6
Q ss_pred CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCC
Q psy4510 293 CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 293 ~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
.|+.|.+||..+++ ....+..+..+ .++|+|+++.+.++.. .++.|.+||+.+.. .+..+..
T Consensus 29 ~d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~---~~~~i~~ 99 (361)
T 2oiz_A 29 TESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT---FEKEISL 99 (361)
T ss_dssp GGCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC---EEEEEEE
T ss_pred ccCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc---EEEEEEc
Confidence 36899999998876 33444444444 8999999996444432 36789999998543 3333311
Q ss_pred c-----CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEE-cccCCCCEEEEEEccCCCcEEEEEECCCC
Q psy4510 364 A-----HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 364 ~-----~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v~~~p~~~~~l~s~~~dg~ 435 (812)
. +......++++|+|++|+++.. ++.|.+||+. ..+.+.. +.. . ....+.+.|.+...+++.+.||.
T Consensus 100 ~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~---~~~~~~~~i~~-~-~~~~v~~~p~~~~~~~~~~~dg~ 174 (361)
T 2oiz_A 100 PPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVA---KGDYVEDVTAA-A-GCWSVIPQPNRPRSFMTICGDGG 174 (361)
T ss_dssp CTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETT---TTEEEEEEGGG-T-TEEEEEECTTSSSEEEEEETTSS
T ss_pred CccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECC---CCcEEEEEecC-C-CcceeEEcCCCCeeEEEECCCCc
Confidence 1 2345678999999998888763 6899999998 4556666 543 2 23446778887678899999999
Q ss_pred EEEEEcCC
Q psy4510 436 IALWDLAV 443 (812)
Q Consensus 436 v~iwd~~~ 443 (812)
+.+|++..
T Consensus 175 ~~~v~~~~ 182 (361)
T 2oiz_A 175 LLTINLGE 182 (361)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 99999865
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.58 E-value=2.2e-13 Score=142.33 Aligned_cols=271 Identities=10% Similarity=0.030 Sum_probs=180.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..|.+++|+| ++..++..+.++.++.|. .. ....+..+...+.+++|++++++++++..++.|.+|+..++
T Consensus 6 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~- 76 (333)
T 2dg1_A 6 QDLPTLFYSG-KSNSAVPIISESELQTIT---AE----PWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETK- 76 (333)
T ss_dssp CCCCBCCSCG-GGGCSSCCCCGGGSCEEE---CE----EEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTC-
T ss_pred cccceeeecC-CccceeEEeecccCcccc---cc----eeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCC-
Confidence 3466788999 877777777788999992 11 33455667777899999999997778888899999998874
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
+.......+...+.+++|+|++ .+++++..+ +.|.+||..++...... ....+...+.+++++|++.
T Consensus 77 ------~~~~~~~~~~~~~~~i~~~~dg-~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~--~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 77 ------EIKRPFVSHKANPAAIKIHKDG-RLFVCYLGDFKSTGGIFAATENGDNLQDII--EDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp ------CEEEEEECSSSSEEEEEECTTS-CEEEEECTTSSSCCEEEEECTTSCSCEEEE--CSSSSCCCEEEEEECTTSC
T ss_pred ------cEEEEeeCCCCCcceEEECCCC-cEEEEeCCCCCCCceEEEEeCCCCEEEEEE--ccCccCCcccceEECCCCC
Confidence 3222233566789999999998 677776665 68999998876521110 1112456799999999997
Q ss_pred eEEEEEEC------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceE
Q psy4510 333 RVLASCSV------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 333 ~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
++++... .+.|..+|..... +..+ ..+...++.++|+|+++.| ++.+.++.|.+||+.. .+..+.
T Consensus 148 -l~v~~~~~~~~~~~~~l~~~~~~~~~----~~~~-~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~--~g~~~~ 219 (333)
T 2dg1_A 148 -FYFTDFRGYSTNPLGGVYYVSPDFRT----VTPI-IQNISVANGIALSTDEKVLWVTETTANRLHRIALED--DGVTIQ 219 (333)
T ss_dssp -EEEEECCCBTTBCCEEEEEECTTSCC----EEEE-EEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT--TSSSEE
T ss_pred -EEEEeccccccCCCceEEEEeCCCCE----EEEe-ecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC--CCcCcc
Confidence 5665543 2456666654221 2222 1223457899999999854 5555678999999963 122221
Q ss_pred --------EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCC------
Q psy4510 406 --------TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQK------ 471 (812)
Q Consensus 406 --------~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 471 (812)
.+.++ ..+..+++++++ +++++...++.|.+||.... .+........
T Consensus 220 ~~~~~~~~~~~~~-~~~~~i~~d~~G-~l~v~~~~~~~v~~~d~~g~-----------------~~~~~~~~~~~~g~~~ 280 (333)
T 2dg1_A 220 PFGATIPYYFTGH-EGPDSCCIDSDD-NLYVAMYGQGRVLVFNKRGY-----------------PIGQILIPGRDEGHML 280 (333)
T ss_dssp EEEEEEEEECCSS-SEEEEEEEBTTC-CEEEEEETTTEEEEECTTSC-----------------EEEEEECTTGGGTCSC
T ss_pred cccceEEEecCCC-CCCCceEECCCC-CEEEEEcCCCEEEEECCCCC-----------------EEEEEEcCCCcccccc
Confidence 12222 467889999987 57777777789999998432 1111111111
Q ss_pred ceeEEEEcCCCCCEEEEEeCC
Q psy4510 472 EIKELHWHPQLPGTIISTANS 492 (812)
Q Consensus 472 ~v~~~~~~p~~~~~~~~~~~~ 492 (812)
.+..++|+|++..+++++..+
T Consensus 281 ~~~~~~~~~dg~~L~v~~~~g 301 (333)
T 2dg1_A 281 RSTHPQFIPGTNQLIICSNDI 301 (333)
T ss_dssp BCCEEEECTTSCEEEEEEECG
T ss_pred CcceEEECCCCCEEEEEeCcc
Confidence 578999998865566665543
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.58 E-value=2.1e-13 Score=158.06 Aligned_cols=252 Identities=12% Similarity=0.019 Sum_probs=171.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCC-----cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg-----~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++||.+..++ .|++||+.+++... ..+. ...+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SP-Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~---~~~~--~~~~~~~~wspDg~~l~~~~~~~~~~ 195 (710)
T 2xdw_A 122 DGTVALRGYAFSE-DGEYFAYGLSASGSDWVTIKFMKVDGAKELP---DVLE--RVKFSCMAWTHDGKGMFYNAYPQQDG 195 (710)
T ss_dssp TSCEEEEEEEECT-TSSEEEEEEEETTCSCEEEEEEETTTTEEEE---EEEE--EECSCCEEECTTSSEEEEEECCCCSS
T ss_pred CCCEEEEEEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCc---cccc--CcccceEEEEeCCCEEEEEEECCccc
Confidence 4555788999999 999998764433 89999999876321 1121 223778999999999999887665
Q ss_pred --------------eEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeC-----CCcEEEEeCCC-
Q psy4510 247 --------------LAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDC-----KRNIHIWTPRE- 304 (812)
Q Consensus 247 --------------i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~-----dg~i~vwd~~~- 304 (812)
|++|++.++ .......+. .|...+..+.|+|++ .+|+.++. +..|++||+.+
T Consensus 196 ~~~~~~~~~~~~~~v~~~~l~t~-----~~~~~~v~~~~~~~~~~~~~~~SpDg-~~l~~~~~~~~~~~~~l~~~d~~~~ 269 (710)
T 2xdw_A 196 KSDGTETSTNLHQKLYYHVLGTD-----QSEDILCAEFPDEPKWMGGAELSDDG-RYVLLSIREGCDPVNRLWYCDLQQE 269 (710)
T ss_dssp CCSSSCCCCCCCCEEEEEETTSC-----GGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECSSSSCCEEEEEEGGGS
T ss_pred cccccccccCCCCEEEEEECCCC-----cccceEEeccCCCCeEEEEEEEcCCC-CEEEEEEEccCCCccEEEEEECccc
Confidence 999999775 111122233 355668899999999 56655543 56899999976
Q ss_pred -----CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccceeecCCcCC-CCeEEEEEc
Q psy4510 305 -----AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSCMLTLPNAHT-SDVNVISWN 375 (812)
Q Consensus 305 -----~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~ 375 (812)
+.. ....+..+...+.. .|+|+++.+++.+..+ +.|.+||+...... ....+...+. ..+..++|+
T Consensus 270 ~~~~~~~~---~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~-~~~~l~~~~~~~~~~~~~~~ 344 (710)
T 2xdw_A 270 SNGITGIL---KWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES-KWKVLVPEHEKDVLEWVACV 344 (710)
T ss_dssp SSSSCSSC---CCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEEECCCSSCEEEEEEEE
T ss_pred ccccCCcc---ceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-cceeccCCCCCCeEEEEEEE
Confidence 321 13344555555554 4889998755555443 37999999754211 1223312222 368889999
Q ss_pred CCCCEEEEEeCCCc--EEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCCC
Q psy4510 376 RTEPLIVSGGDDGC--IHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVER 445 (812)
Q Consensus 376 ~~~~~l~sg~~dg~--i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~~ 445 (812)
+++.++++...++. |.+|++. .+..+..+..+.+.|..+.++|++..++++.+. .++|.+||+.+++
T Consensus 345 ~~~~lv~~~~~~g~~~l~~~~~~---~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 345 RSNFLVLCYLHDVKNTLQLHDLA---TGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp TTTEEEEEEEETTEEEEEEEETT---TCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred cCCEEEEEEEECCEEEEEEEECC---CCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 77778888888885 5556664 355667777777889999999987555555443 4689999998764
No 176
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=8.2e-13 Score=139.05 Aligned_cols=289 Identities=9% Similarity=-0.008 Sum_probs=181.0
Q ss_pred CCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCce
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
.|+.|.+||..+++ ....+..+..+ .++|+|++++|++++ .++.|.+||..+. +.+.
T Consensus 29 ~d~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~-------~~~~ 95 (361)
T 2oiz_A 29 TESRVHVYDYTNGK----FLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKL-------TFEK 95 (361)
T ss_dssp GGCEEEEEETTTCC----EEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTC-------CEEE
T ss_pred ccCeEEEEECCCCe----EEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCC-------cEEE
Confidence 47799999988876 33455555555 899999999999886 3677999998874 5555
Q ss_pred EEcCC------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceecccc-ccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 267 SFSGH------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKP-LVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 267 ~~~~h------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
++... ......++++|++ ++|+++.. +++|.+||+.+.+ .... +. +. ....+.+.|++...+++
T Consensus 96 ~i~~~~~~~~~g~~p~~i~~spdg-~~l~v~n~~~~~~v~v~d~~~~~----~~~~~i~-~~-~~~~v~~~p~~~~~~~~ 168 (361)
T 2oiz_A 96 EISLPPKRVQGLNYDGLFRQTTDG-KFIVLQNASPATSIGIVDVAKGD----YVEDVTA-AA-GCWSVIPQPNRPRSFMT 168 (361)
T ss_dssp EEEECTTBCCBCCCGGGEEECTTS-SEEEEEEESSSEEEEEEETTTTE----EEEEEGG-GT-TEEEEEECTTSSSEEEE
T ss_pred EEEcCccccccCCCcceEEECCCC-CEEEEECCCCCCeEEEEECCCCc----EEEEEec-CC-CcceeEEcCCCCeeEEE
Confidence 55432 2345689999999 67776653 6899999999875 2333 22 21 22336678887667889
Q ss_pred EECCCeEEEEECCCCCccc-cee--ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc-----
Q psy4510 338 CSVDLSIRIWDTRVINTKS-CML--TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH----- 409 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~-~~~--~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~----- 409 (812)
.+.||.+.+|+........ ... .....+..++ .+.+++++..++..+.++.|.++|+.... ...+..+..
T Consensus 169 ~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~v~v~d~~~~~-~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 169 ICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI-FIAPALDKDKAHFVSYYGNVYSADFSGDE-VKVDGPWSLLNDED 246 (361)
T ss_dssp EETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB-CSCCEECSSEEEEEBTTSEEEEEECSSSS-CEEEEEEESCCHHH
T ss_pred ECCCCcEEEEEECCCCcEeeeccccceEcCCCCce-EEEecccCCEEEEEeCCCeEEEEEecCCC-ceecccccccCccc
Confidence 9999999999986422111 000 1112222222 23345667767777788999999986311 111111110
Q ss_pred -CC----CCEEEEEEccCCCcEEEEEEC----------CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 410 -HT----APVTTVEWHPTESSTFASGGA----------DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 410 -h~----~~v~~v~~~p~~~~~l~s~~~----------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
+. .....++|+|++..++++... .+.|.+||+.+.+ .+....... +.
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~-----------------~v~~i~~~~-p~ 308 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQ-----------------RVARIPGRD-AL 308 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTE-----------------EEEEEECTT-CC
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCc-----------------EEEEEecCC-ee
Confidence 01 111126899997655555441 3479999998873 333333334 99
Q ss_pred EEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCC
Q psy4510 475 ELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQL 526 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~ 526 (812)
.++|+|++..++++.. +.+.+|+..+.....+............++++|++
T Consensus 309 ~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 309 SMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp EEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred EEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 9999999985555554 77788865443112222222344567788888884
No 177
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.56 E-value=1.4e-13 Score=158.92 Aligned_cols=252 Identities=11% Similarity=-0.011 Sum_probs=169.3
Q ss_pred CCCCceEEEEeCCCCCCeEE-----EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLA-----TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~la-----t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++|| .|+.+..|++||+.+++... ...+... ....++|+|||+.|+.++.+..
T Consensus 118 ~~~~~~~~~~~SP-DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~--~~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~ 192 (695)
T 2bkl_A 118 DGTVSLGTWAVSW-DGKKVAFAQKPNAADEAVLHVIDVDSGEWSK--VDVIEGG--KYATPKWTPDSKGFYYEWLPTDPS 192 (695)
T ss_dssp SSCEEEEEEEECT-TSSEEEEEEEETTCSCCEEEEEETTTCCBCS--SCCBSCC--TTCCCEECTTSSEEEEEECCCCTT
T ss_pred CCCEEEEEEEECC-CCCEEEEEECCCCCceEEEEEEECCCCCCcC--CcccCcc--cccceEEecCCCEEEEEEecCCCC
Confidence 5667799999999 999999 55566789999999886310 1112111 1268999999999999988765
Q ss_pred -----------eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC----cEEEEeCCCCCcceec
Q psy4510 247 -----------LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR----NIHIWTPREAGAWQVD 311 (812)
Q Consensus 247 -----------i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~ 311 (812)
|++|++.++.. ....+.....|...+.++.|+|+| .+|+.++.++ .|++|+..++.
T Consensus 193 ~~~~~~~~~~~v~~~~l~t~~~---~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~l~~~~~~~~~----- 263 (695)
T 2bkl_A 193 IKVDERPGYTTIRYHTLGTEPS---KDTVVHERTGDPTTFLQSDLSRDG-KYLFVYILRGWSENDVYWKRPGEKD----- 263 (695)
T ss_dssp SCGGGGGGGCEEEEEETTSCGG---GCEEEECCCCCTTCEEEEEECTTS-CCEEEEEEETTTEEEEEEECTTCSS-----
T ss_pred CccccCCCCCEEEEEECCCCch---hceEEEecCCCCEEEEEEEECCCC-CEEEEEEeCCCCceEEEEEcCCCCc-----
Confidence 99999987510 011233334456688999999999 5555554444 56666654432
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcC-CCCeEEEEEcCCCCEEEEEeCC
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAH-TSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~l~sg~~d 387 (812)
...+..+...+....| +++. +++++. .++.|.+||+.++.... ...+...+ ...+..++|+ ++.++++...+
T Consensus 264 ~~~l~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~~~~~-~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~d 339 (695)
T 2bkl_A 264 FRLLVKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKPARAS-WKEIVPEDSSASLLSVSIV-GGHLSLEYLKD 339 (695)
T ss_dssp CEEEEECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBCSGGG-CEEEECCCSSCEEEEEEEE-TTEEEEEEEET
T ss_pred eEEeecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCCCccC-CeEEecCCCCCeEEEEEEE-CCEEEEEEEEC
Confidence 3344455556666667 6676 666665 35899999997543211 12221223 4567888888 66788999999
Q ss_pred CcEEEEecCCCCCCCceEEcccC-CCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCCC
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHH-TAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVER 445 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~~ 445 (812)
+..+||.+.. .+..+..+..+ .+.|..+.++|++..++++.+. .++|.+||+.+..
T Consensus 340 g~~~l~~~~~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 340 ATSEVRVATL--KGKPVRTVQLPGVGAASNLMGLEDLDDAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp TEEEEEEEET--TCCEEEECCCSSSSEECCCBSCTTCSEEEEEEEETTEEEEEEEEETTTCC
T ss_pred CEEEEEEEeC--CCCeeEEecCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCc
Confidence 9988887653 24455666655 6678888999987555555443 4679999998763
No 178
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=1.2e-11 Score=136.69 Aligned_cols=239 Identities=13% Similarity=0.021 Sum_probs=161.0
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.+.++++...++.|.++|..+++ ....+.. ...+..++|+|+|+++++++.++.|.+||+... ..+.+.+
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~----v~~~i~~-g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~-----t~~~v~~ 235 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYE----IKTVLDT-GYAVHISRLSASGRYLFVIGRDGKVNMIDLWMK-----EPTTVAE 235 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCC----EEEEEEC-SSCEEEEEECTTSCEEEEEETTSEEEEEETTSS-----SCCEEEE
T ss_pred CceEEEEeCCCCeEEEEECCCCe----EEEEEeC-CCCccceEECCCCCEEEEEcCCCeEEEEECCCC-----CCcEeEE
Confidence 45567777889999999999876 3333332 234668999999999999999999999999511 1255566
Q ss_pred EcCCCCcEEEEEec----CCCCCEEEEEeCCCcEEEEeCCCCCcceecc-cc--cc---CC-CCCEEEEEEcCCCCeEEE
Q psy4510 268 FSGHLTEGFAMDWS----STEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KP--LV---GH-TNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 268 ~~~h~~~v~~l~~s----p~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~--~~---~h-~~~v~~~~~~p~~~~~l~ 336 (812)
+.. ......++|+ |+|+.++++...+++|.++|..+.+...... .. .. .| ...+..+..++++..+++
T Consensus 236 i~~-G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv 314 (567)
T 1qks_A 236 IKI-GSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIV 314 (567)
T ss_dssp EEC-CSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEE
T ss_pred Eec-CCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEE
Confidence 654 3346799999 6984445555567999999988766321111 01 00 12 226888999999887777
Q ss_pred EEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CCCcEEEEecCCCCCCCceEEccc-----C
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DDGCIHVWDLRRFKKGSSVATFKH-----H 410 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~dg~i~iwd~~~~~~~~~~~~~~~-----h 410 (812)
+....|.|.++|....... .+..+ ........+.|+|++++++++. .++.|.++|+.+ ++.+..+.. |
T Consensus 315 ~~~~~g~v~~vd~~~~~~~-~v~~i--~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t---~kl~~~i~vgg~~Ph 388 (567)
T 1qks_A 315 NVKETGKILLVDYTDLNNL-KTTEI--SAERFLHDGGLDGSHRYFITAANARNKLVVIDTKE---GKLVAIEDTGGQTPH 388 (567)
T ss_dssp EETTTTEEEEEETTCSSEE-EEEEE--ECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTT---TEEEEEEECSSSSBC
T ss_pred EecCCCeEEEEecCCCccc-eeeee--eccccccCceECCCCCEEEEEeCCCCeEEEEECCC---CcEEEEEeccCcCCC
Confidence 7778899999998753211 12222 2334567889999999765554 678999999984 444444432 4
Q ss_pred CCCEEEEEEccCCCcEEEEEE-CCCCEEEEEcCCC
Q psy4510 411 TAPVTTVEWHPTESSTFASGG-ADDQIALWDLAVE 444 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd~~~~ 444 (812)
.+.-..+ ++|++..+++++. .++.|.++|....
T Consensus 389 pg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~ 422 (567)
T 1qks_A 389 PGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPE 422 (567)
T ss_dssp CTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTT
T ss_pred Cccceee-ECCCCCcEEEeCCCCCCeEEEecCCCC
Confidence 3222222 5787555555553 4689999999874
No 179
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.56 E-value=2.3e-12 Score=134.47 Aligned_cols=235 Identities=11% Similarity=0.049 Sum_probs=160.6
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEE
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAE 249 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~v 249 (812)
++...+.+++|+| ++++++++..++.|.+||..+++. ......+...+.+++++++++++++...+ +.|.+
T Consensus 42 ~~~~~~~~~~~~~-~g~l~~~~~~~~~i~~~d~~~~~~----~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~ 116 (333)
T 2dg1_A 42 KKGLQLEGLNFDR-QGQLFLLDVFEGNIFKINPETKEI----KRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFA 116 (333)
T ss_dssp SSCCCEEEEEECT-TSCEEEEETTTCEEEEECTTTCCE----EEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEE
T ss_pred ccCccccCcEECC-CCCEEEEECCCCEEEEEeCCCCcE----EEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEE
Confidence 4556678999999 999888998899999999887652 22222456789999999999987777666 68999
Q ss_pred eeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
|+..++ .....+. .+...+.+++++|++ .++++... .+.|..++..++.. ..+..+...
T Consensus 117 ~d~~~~-------~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~l~~~~~~~~~~-----~~~~~~~~~ 183 (333)
T 2dg1_A 117 ATENGD-------NLQDIIEDLSTAYCIDDMVFDSKG-GFYFTDFRGYSTNPLGGVYYVSPDFRTV-----TPIIQNISV 183 (333)
T ss_dssp ECTTSC-------SCEEEECSSSSCCCEEEEEECTTS-CEEEEECCCBTTBCCEEEEEECTTSCCE-----EEEEEEESS
T ss_pred EeCCCC-------EEEEEEccCccCCcccceEECCCC-CEEEEeccccccCCCceEEEEeCCCCEE-----EEeecCCCc
Confidence 998774 2221222 244678999999998 66666543 24566666554331 122223345
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCC-Ccccc-----eeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVI-NTKSC-----MLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~-~~~~~-----~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
+..++|+|+++.++++.+.++.|.+||++.. ..... ...+ ..+ ..+..++++++|+++++...++.|.+||.
T Consensus 184 ~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~-~~~-~~~~~i~~d~~G~l~v~~~~~~~v~~~d~ 261 (333)
T 2dg1_A 184 ANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYF-TGH-EGPDSCCIDSDDNLYVAMYGQGRVLVFNK 261 (333)
T ss_dssp EEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEEC-CSS-SEEEEEEEBTTCCEEEEEETTTEEEEECT
T ss_pred ccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEec-CCC-CCCCceEECCCCCEEEEEcCCCEEEEECC
Confidence 7899999999866666667899999998632 11111 0111 122 46788999999998888777899999998
Q ss_pred CCCCCCCceEEcccCCC------CEEEEEEccCCCcEEEEEECC
Q psy4510 396 RRFKKGSSVATFKHHTA------PVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 396 ~~~~~~~~~~~~~~h~~------~v~~v~~~p~~~~~l~s~~~d 433 (812)
. ++.+..+..+.. .+.+++|+|++. .|+.++.+
T Consensus 262 ~----g~~~~~~~~~~~~~g~~~~~~~~~~~~dg~-~L~v~~~~ 300 (333)
T 2dg1_A 262 R----GYPIGQILIPGRDEGHMLRSTHPQFIPGTN-QLIICSND 300 (333)
T ss_dssp T----SCEEEEEECTTGGGTCSCBCCEEEECTTSC-EEEEEEEC
T ss_pred C----CCEEEEEEcCCCccccccCcceEEECCCCC-EEEEEeCc
Confidence 4 345555544332 588999999864 45444443
No 180
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.56 E-value=3.6e-11 Score=133.00 Aligned_cols=317 Identities=11% Similarity=0.034 Sum_probs=194.0
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
.++++...++.|.++|..+. ..+.++. ....+..+.|+|+|+++++++.++.|.+||+.. .+.+.+..+....
T Consensus 168 ~~~V~~~~~~~V~viD~~t~---~v~~~i~--~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~-~t~~~v~~i~~G~- 240 (567)
T 1qks_A 168 LFSVTLRDAGQIALIDGSTY---EIKTVLD--TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWM-KEPTTVAEIKIGS- 240 (567)
T ss_dssp EEEEEETTTTEEEEEETTTC---CEEEEEE--CSSCEEEEEECTTSCEEEEEETTSEEEEEETTS-SSCCEEEEEECCS-
T ss_pred eEEEEeCCCCeEEEEECCCC---eEEEEEe--CCCCccceEECCCCCEEEEEcCCCeEEEEECCC-CCCcEeEEEecCC-
Confidence 46777888999999999843 3344442 234567999999999999999999999999951 0345666666433
Q ss_pred CEEEEEEc----cCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeec---------CCCceeEEEEc
Q psy4510 413 PVTTVEWH----PTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHL---------GQKEIKELHWH 479 (812)
Q Consensus 413 ~v~~v~~~----p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~v~~~~~~ 479 (812)
....++|+ |+|..++++...+++|.++|..+.+.. ..+.... ....+..+..+
T Consensus 241 ~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~--------------~~i~~~~~~~~~~~~~p~~rva~i~~s 306 (567)
T 1qks_A 241 EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPK--------------KIQSTRGMTYDEQEYHPEPRVAAILAS 306 (567)
T ss_dssp EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEE--------------EEEECCEECTTTCCEESCCCEEEEEEC
T ss_pred CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEE--------------EEEeccccccccccccCCCceEEEEEc
Confidence 45789999 688655555566799999998776321 0010000 01134445555
Q ss_pred CCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccc
Q psy4510 480 PQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERE 559 (812)
Q Consensus 480 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 559 (812)
++.+..++.....+........ .. ..
T Consensus 307 ~~~~~~vv~~~~~g~v~~vd~~----------------------~~--~~------------------------------ 332 (567)
T 1qks_A 307 HYRPEFIVNVKETGKILLVDYT----------------------DL--NN------------------------------ 332 (567)
T ss_dssp SSSSEEEEEETTTTEEEEEETT----------------------CS--SE------------------------------
T ss_pred CCCCEEEEEecCCCeEEEEecC----------------------CC--cc------------------------------
Confidence 5444333333222211111110 00 00
Q ss_pred cccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccC
Q psy4510 560 LEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRG 639 (812)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~ 639 (812)
+.............+.|+|+|+++++++ ..++.|.++|+.+++.
T Consensus 333 -------------------~~v~~i~~~~~~~d~~~~pdgr~~~va~-~~sn~V~ViD~~t~kl---------------- 376 (567)
T 1qks_A 333 -------------------LKTTEISAERFLHDGGLDGSHRYFITAA-NARNKLVVIDTKEGKL---------------- 376 (567)
T ss_dssp -------------------EEEEEEECCSSEEEEEECTTSCEEEEEE-GGGTEEEEEETTTTEE----------------
T ss_pred -------------------ceeeeeeccccccCceECCCCCEEEEEe-CCCCeEEEEECCCCcE----------------
Confidence 0000111122455778999999988875 5688999999998762
Q ss_pred CCCCCCCCCeeee-----cCCCCceEEEEeCCCCCCeEEecC-CCceEEEEecCC-------CceeEE----------EE
Q psy4510 640 KGPGIPTPPLFSF-----SGHLTEGFAMDWSSTEPGVLATGD-CKRNIHIWTPRE-------AGAWSV----------YL 696 (812)
Q Consensus 640 ~~~~~~~~~~~~~-----~gh~~~V~~l~~sp~~~~~las~s-~Dg~v~iWd~~~-------~~~~~~----------~~ 696 (812)
+..+ ..|.+....+ ++|+.+.+++++. .+++|.++|..+ -+++.. +.
T Consensus 377 ---------~~~i~vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~ 446 (567)
T 1qks_A 377 ---------VAIEDTGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIK 446 (567)
T ss_dssp ---------EEEEECSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEE
T ss_pred ---------EEEEeccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEE
Confidence 1111 1243322222 5774355555553 578999999987 233322 23
Q ss_pred ecCCCCEEEeecC-------CCeEEEeecCCC-----CC-ccccc-c---cccCCCcceeEeEEecCCceeEEeec----
Q psy4510 697 YTNRFGVLATGDC-------KRNIHIWTPREA-----GA-WQVDQ-K---PLVGHTNSVEDLQWSPGEKRVLASCS---- 755 (812)
Q Consensus 697 ~s~dg~~lasgs~-------dg~i~iwd~~~~-----~~-~~~~~-~---~~~gH~~~V~~l~fs~dg~~~L~s~s---- 755 (812)
.+|++++|.+... ...|.++|+.+. .. +..+. . .+..-...+..+.|+|+|+++++|..
T Consensus 447 ~~p~~~~l~v~~~~~~~~~~~~~v~v~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~s~~~~~~ 526 (567)
T 1qks_A 447 THPNSQYLYVDATLNPEAEISGSVAVFDIKAMTGDGSDPEFKTLPIAEWAGITEGQPRVVQGEFNKDGTEVWFSVWNGKD 526 (567)
T ss_dssp CCTTCSEEEEECTTCSSHHHHTCEEEEEGGGCCCSSSCCCEEEECHHHHHTCCSSCCEEEEEEECTTSSEEEEEEECCTT
T ss_pred eCCCCCeEEEecCCCCCcccCceEEEEECCcccccccCCCcEEeccccccccCCCCcceEeeeECCCCCEEEEEeecCCC
Confidence 6899998887653 469999999876 21 01010 0 11112357899999999997777743
Q ss_pred cCCceEEeeecCcce
Q psy4510 756 VDRSNRIGARRDMLY 770 (812)
Q Consensus 756 ~Dg~i~iWd~~~~~~ 770 (812)
.++.|.|+|.+..+.
T Consensus 527 ~~~~i~v~D~~t~~~ 541 (567)
T 1qks_A 527 QESALVVVDDKTLEL 541 (567)
T ss_dssp SCCEEEEEETTTTEE
T ss_pred CCCcEEEEECCCceE
Confidence 479999999998873
No 181
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.55 E-value=3.3e-12 Score=130.04 Aligned_cols=242 Identities=9% Similarity=0.143 Sum_probs=167.3
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEc------CCCCcEEEEEec-CCCCCEEEEEe
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFS------GHLTEGFAMDWS-STEPGVLATGD 292 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~h~~~v~~l~~s-p~~~~~l~sg~ 292 (812)
.++-..+.+++++++++++++...++.|.+|+... +.+..+. +|...+.++++. +++ .++++..
T Consensus 26 ~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g--------~~~~~~~~~~~~~~~~~~p~~i~~~~~~g-~l~v~~~ 96 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEG--------RFKFQFGECGKRDSQLLYPNRVAVVRNSG-DIIVTER 96 (286)
T ss_dssp TTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTS--------CEEEEECCBSSSTTCBSSEEEEEEETTTT-EEEEEEC
T ss_pred CCccCCCceEEECCCCCEEEEECCCCEEEEECCCC--------cEEEEecccCCCcccccCceEEEEEcCCC-eEEEEcC
Confidence 35667789999999999888888899999999764 3344442 344678999995 565 5555553
Q ss_pred C-CCcEEEEeCCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecC-CcCCCCe
Q psy4510 293 C-KRNIHIWTPREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDV 369 (812)
Q Consensus 293 ~-dg~i~vwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v 369 (812)
. ++.|++|+. ++. ....+ ..+...+.+++++|++. ++++...++.|.+||... ..+..+. ..+...+
T Consensus 97 ~~~~~i~~~d~-~g~----~~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~g----~~~~~~~~~~~~~~p 166 (286)
T 1q7f_A 97 SPTHQIQIYNQ-YGQ----FVRKFGATILQHPRGVTVDNKGR-IIVVECKVMRVIIFDQNG----NVLHKFGCSKHLEFP 166 (286)
T ss_dssp GGGCEEEEECT-TSC----EEEEECTTTCSCEEEEEECTTSC-EEEEETTTTEEEEECTTS----CEEEEEECTTTCSSE
T ss_pred CCCCEEEEECC-CCc----EEEEecCccCCCceEEEEeCCCC-EEEEECCCCEEEEEcCCC----CEEEEeCCCCccCCc
Confidence 3 789999994 443 12222 23446789999999997 788877889999999652 2223321 1344568
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC--CCCEEEEEEccCCCcEEEEEECCC-CEEEEEcCCCCc
Q psy4510 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFASGGADD-QIALWDLAVERD 446 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~dg-~v~iwd~~~~~~ 446 (812)
..++++++++++++...++.|++||.. +..+..+..+ ...+.+|+++|++ +++++...++ .|.+||......
T Consensus 167 ~~i~~~~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~g~~~~p~~i~~d~~G-~l~v~~~~~~~~i~~~~~~g~~~ 241 (286)
T 1q7f_A 167 NGVVVNDKQEIFISDNRAHCVKVFNYE----GQYLRQIGGEGITNYPIGVGINSNG-EILIADNHNNFNLTIFTQDGQLI 241 (286)
T ss_dssp EEEEECSSSEEEEEEGGGTEEEEEETT----CCEEEEESCTTTSCSEEEEEECTTC-CEEEEECSSSCEEEEECTTSCEE
T ss_pred EEEEECCCCCEEEEECCCCEEEEEcCC----CCEEEEEccCCccCCCcEEEECCCC-CEEEEeCCCCEEEEEECCCCCEE
Confidence 999999999988888889999999974 4556666443 3678999999987 6777777775 999999643310
Q ss_pred hhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCC
Q psy4510 447 SEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTIS 501 (812)
Q Consensus 447 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 501 (812)
.....+.....+..++++|++. ++++..+..+.+|+...
T Consensus 242 ---------------~~~~~~~~~~~~~~i~~~~~g~-l~vs~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 242 ---------------SALESKVKHAQCFDVALMDDGS-VVLASKDYRLYIYRYVQ 280 (286)
T ss_dssp ---------------EEEEESSCCSCEEEEEEETTTE-EEEEETTTEEEEEECSC
T ss_pred ---------------EEEcccCCCCcceeEEECCCCc-EEEECCCCeEEEEEccc
Confidence 1111222223478999999874 55565444566776443
No 182
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.55 E-value=2.6e-12 Score=129.61 Aligned_cols=239 Identities=8% Similarity=-0.030 Sum_probs=167.8
Q ss_pred ceEEEEeCCCCCCeEE-EecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLA-TGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 178 ~i~~~~~sp~~~~~la-t~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
...+++++| ++++++ +.+.++.|.+|+..+... ......+...+.+++++++++.+++.. ++.|.+|+....
T Consensus 25 ~p~~i~~~~-~g~l~v~~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~- 97 (270)
T 1rwi_B 25 SPSGVAVDS-AGNVYVTSEGMYGRVVKLATGSTGT----TVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSN- 97 (270)
T ss_dssp CEEEEEECT-TCCEEEEECSSSCEEEEECC---------EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCS-
T ss_pred CccceEECC-CCCEEEEccCCCCcEEEecCCCccc----ceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCc-
Confidence 788999999 999887 557788999998765442 111223445788999999998666555 889999998763
Q ss_pred CCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 257 GPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 257 ~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
....+. .....+.++++.+++ .++++...++.|.+|+..+... ..........+.++++++++. ++
T Consensus 98 -------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~~~~~i~~~~~~~~~~----~~~~~~~~~~p~~i~~~~~g~-l~ 164 (270)
T 1rwi_B 98 -------NQTVLPFDGLNYPEGLAVDTQG-AVYVADRGNNRVVKLAAGSKTQ----TVLPFTGLNDPDGVAVDNSGN-VY 164 (270)
T ss_dssp -------CCEECCCCSCSSEEEEEECTTC-CEEEEEGGGTEEEEECTTCCSC----EECCCCSCCSCCCEEECTTCC-EE
T ss_pred -------eEeeeecCCcCCCcceEECCCC-CEEEEECCCCEEEEEECCCcee----EeeccccCCCceeEEEeCCCC-EE
Confidence 222222 223578999999988 6777777788999997654431 111122334678999999997 77
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
++...++.|.+||..... .......+...+..++++++|.++++...++.|.+|+... .........+...+.
T Consensus 165 v~~~~~~~i~~~~~~~~~----~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~p~ 237 (270)
T 1rwi_B 165 VTDTDNNRVVKLEAESNN----QVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGS---TTSTVLPFTGLNTPL 237 (270)
T ss_dssp EEEGGGTEEEEECTTTCC----EEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTC---SCCEECCCCSCSCEE
T ss_pred EEECCCCEEEEEecCCCc----eEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCC---CcceeeccCCCCCce
Confidence 777778999999987422 1122123336789999999998888777788999999863 222222223346789
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+++++|++ +++++...+++|+++++...
T Consensus 238 ~i~~~~~g-~l~v~~~~~~~v~~~~~~~~ 265 (270)
T 1rwi_B 238 AVAVDSDR-TVYVADRGNDRVVKLTSLEH 265 (270)
T ss_dssp EEEECTTC-CEEEEEGGGTEEEEECCCGG
T ss_pred eEEECCCC-CEEEEECCCCEEEEEcCCCc
Confidence 99999987 58888888999999998765
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.54 E-value=1e-12 Score=134.57 Aligned_cols=239 Identities=9% Similarity=0.031 Sum_probs=167.5
Q ss_pred CCCCceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 174 GHLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
.+.....+++|+| +++ +++++..++.|.+|+..++ . ..+..+...+.+++++++|+++++...++.|.+|+.
T Consensus 25 ~~~~~~eg~~~d~-~g~~l~~~~~~~~~i~~~~~~~~-~-----~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~ 97 (296)
T 3e5z_A 25 DGFTWTEGPVYVP-ARSAVIFSDVRQNRTWAWSDDGQ-L-----SPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQRE 97 (296)
T ss_dssp CCCSSEEEEEEEG-GGTEEEEEEGGGTEEEEEETTSC-E-----EEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECS
T ss_pred cCCccccCCeEeC-CCCEEEEEeCCCCEEEEEECCCC-e-----EEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcC
Confidence 3455678999999 888 8889988999999998875 1 233456678999999999998877777789999998
Q ss_pred CCCCCCCCCCCCceEEcCC----CCcEEEEEecCCCCCEEEEE----e-------------CCCcEEEEeCCCCCcceec
Q psy4510 253 KRGKGPGIPTPPLFSFSGH----LTEGFAMDWSSTEPGVLATG----D-------------CKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~h----~~~v~~l~~sp~~~~~l~sg----~-------------~dg~i~vwd~~~~~~~~~~ 311 (812)
.++ +........ ...+..++++|+| .++++. . ..+.|..++.. +.
T Consensus 98 ~~g-------~~~~~~~~~~~~~~~~~~~i~~d~~G-~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~----- 163 (296)
T 3e5z_A 98 PGG-------EWESIADSFEGKKLNSPNDVCLAPDG-SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GT----- 163 (296)
T ss_dssp TTC-------CEEEEECEETTEECCCCCCEEECTTS-CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SC-----
T ss_pred CCC-------cEEEEeeccCCCCCCCCCCEEECCCC-CEEEECCccccccccccccccccCCCcEEEEECCC-CC-----
Confidence 765 221111111 1245679999998 677763 2 12455555554 32
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc-cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK-SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
...+..+......++|+|+++. +++.+.++.|.+|++...... .....+ ..+...+..++++++|+++++. ++.|
T Consensus 164 ~~~~~~~~~~~~gi~~s~dg~~-lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~~~~~p~~i~~d~~G~l~v~~--~~~v 239 (296)
T 3e5z_A 164 LSAPIRDRVKPNGLAFLPSGNL-LVSDTGDNATHRYCLNARGETEYQGVHF-TVEPGKTDGLRVDAGGLIWASA--GDGV 239 (296)
T ss_dssp EEEEECCCSSEEEEEECTTSCE-EEEETTTTEEEEEEECSSSCEEEEEEEE-CCSSSCCCSEEEBTTSCEEEEE--TTEE
T ss_pred EEEeecCCCCCccEEECCCCCE-EEEeCCCCeEEEEEECCCCcCcCCCeEe-eCCCCCCCeEEECCCCCEEEEc--CCeE
Confidence 2334456667899999999995 578888899999998721111 112223 3455667889999999866665 7889
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEE-ccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEW-HPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~-~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.+||.. ++.+..+..+.. +++++| .|++ ..|++++.++ +..++..+.
T Consensus 240 ~~~~~~----g~~~~~~~~~~~-~~~~~f~~~d~-~~L~v~t~~~-l~~~~~~~~ 287 (296)
T 3e5z_A 240 HVLTPD----GDELGRVLTPQT-TSNLCFGGPEG-RTLYMTVSTE-FWSIETNVR 287 (296)
T ss_dssp EEECTT----SCEEEEEECSSC-CCEEEEESTTS-CEEEEEETTE-EEEEECSCC
T ss_pred EEECCC----CCEEEEEECCCC-ceeEEEECCCC-CEEEEEcCCe-EEEEEcccc
Confidence 999984 566777777777 899999 5765 5677777653 555565554
No 184
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.53 E-value=7.9e-13 Score=138.96 Aligned_cols=255 Identities=8% Similarity=0.014 Sum_probs=163.1
Q ss_pred CceEEEEeCCCCCCeEEEe---------cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC---
Q psy4510 177 TEGFAMDWSSTEPGVLATG---------DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP--- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~---------~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d--- 244 (812)
..+...++ +|+.||.. +.++.|.+|++.+++. ..+ ..+..++|||+|++|+.++.+
T Consensus 15 ~~~~~~~~---dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~-----~~l----~~~~~~~~SpDg~~la~~~~~~~~ 82 (347)
T 2gop_A 15 AYLSDPRT---KGELVAYVLTKANLKDNKYENTIVIENLKNNAR-----RFI----ENATMPRISPDGKKIAFMRANEEK 82 (347)
T ss_dssp CEEEEEEE---ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCE-----EEE----ESCEEEEECTTSSEEEEEEEETTT
T ss_pred EEcccceE---CCcEEEEEEeecCcccCCccceEEEEeCCCCce-----EEc----ccCCCeEECCCCCEEEEEEeccCC
Confidence 45666777 67766643 2356799999987652 122 568899999999999988753
Q ss_pred Cc--eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---------------------------CC
Q psy4510 245 FQ--LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---------------------------KR 295 (812)
Q Consensus 245 ~~--i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---------------------------dg 295 (812)
+. |.+|++.++ +.. .+..+.. +..++|+|++ ..|+.++. ..
T Consensus 83 ~~~~l~~~~~~~g-------~~~-~l~~~~~-~~~~~wspdg-~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 152 (347)
T 2gop_A 83 KVSEIWVADLETL-------SSK-KILEAKN-IRSLEWNEDS-RKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKT 152 (347)
T ss_dssp TEEEEEEEETTTT-------EEE-EEEEESE-EEEEEECTTS-SEEEEEEECCCC---------CCCC---------CEE
T ss_pred CcceEEEEECCCC-------ceE-EEEcCCC-ccceeECCCC-CEEEEEEccCCCcCCcEEEcccceeecCcccccCccc
Confidence 33 777777764 222 2333334 9999999999 56666543 25
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-------eEEEEECCCCCcccceeecCCcCCCC
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-------SIRIWDTRVINTKSCMLTLPNAHTSD 368 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-------~i~iwd~~~~~~~~~~~~~~~~~~~~ 368 (812)
.|++|++.++.. ...+.. . .+..++|+|++ +++++..++ ...||.+.++ . ...+ ..+ ..
T Consensus 153 ~l~~~d~~~~~~----~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~~l~~~d~~-~---~~~l-~~~-~~ 218 (347)
T 2gop_A 153 TFWIFDTESEEV----IEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFWDIYIWEDG-K---EEKM-FEK-VS 218 (347)
T ss_dssp EEEEEETTTTEE----EEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCEEEEEEETT-E---EEEE-EEE-ES
T ss_pred eEEEEECCCCeE----EeeecC-C-CcccccCCCCe--EEEEEecccccccccccccEEEeCCC-c---eEEe-ccC-cc
Confidence 789999987652 122332 2 68899999999 577766542 3455544421 1 2222 223 44
Q ss_pred eEEEEEcCCCCEEEEEeCC--------CcEEEEecCCCCCCCceEEcccCCCCEEE-EEEccCCCcEEEEEECCCCEEEE
Q psy4510 369 VNVISWNRTEPLIVSGGDD--------GCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 369 v~~l~~~~~~~~l~sg~~d--------g~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
+..+ +|+|+.|+.++.+ ..|.+|| . +........|...+.. +.|+ ++ ++++++.++.+++|
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d-~----~~~~~l~~~~~~~~~~~~~~s-dg--~~~~~~~~~~~~l~ 288 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD-G----KEVMGILDEVDRGVGQAKIKD-GK--VYFTLFEEGSVNLY 288 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC-S----SCEEESSTTCCSEEEEEEEET-TE--EEEEEEETTEEEEE
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC-C----CceEeccccCCcccCCccEEc-Cc--EEEEEecCCcEEEE
Confidence 5544 8999977776644 3677777 2 3334444556778886 9999 64 88888999999999
Q ss_pred EcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC-e-EEEE
Q psy4510 440 DLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG-F-NIFR 498 (812)
Q Consensus 440 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~-~-~~~~ 498 (812)
+..+ .......+...|.+++|+| .++++.+.++ . .+|.
T Consensus 289 -~~~g-----------------~~~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~ 328 (347)
T 2gop_A 289 -IWDG-----------------EIKPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFT 328 (347)
T ss_dssp -EESS-----------------SEEEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEE
T ss_pred -EcCC-----------------ceEEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheE
Confidence 8733 2222333456789999999 3555544433 2 4554
No 185
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.51 E-value=7e-11 Score=120.92 Aligned_cols=283 Identities=9% Similarity=-0.033 Sum_probs=190.5
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
.+...+.++++.| +|+++++...++.|.+|+.. +.. ....+..+...+.+++++++++.+++...++.|..|+..
T Consensus 12 ~~~~~~~~i~~d~-~g~l~v~~~~~~~v~~~d~~-~~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~ 86 (299)
T 2z2n_A 12 NQDTGPYGITVSD-KGKVWITQHKANMISCINLD-GKI---TEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK 86 (299)
T ss_dssp SSSCCEEEEEECT-TSCEEEEETTTTEEEEECTT-CCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CcCCCccceEECC-CCCEEEEecCCCcEEEEcCC-CCe---EEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC
Confidence 3456799999999 99988887777899999987 431 112223355789999999999988877778889999875
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.. .....+......+.++++.+++ .++++...++.|.+|+. ++.. .......+...+..+++.+++.
T Consensus 87 g~-------~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~d~-~g~~---~~~~~~~~~~~~~~i~~~~~g~- 153 (299)
T 2z2n_A 87 GI-------IKEYTLPNPDSAPYGITEGPNG-DIWFTEMNGNRIGRITD-DGKI---REYELPNKGSYPSFITLGSDNA- 153 (299)
T ss_dssp SC-------EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEECT-TCCE---EEEECSSTTCCEEEEEECTTSC-
T ss_pred Cc-------EEEEeCCCcCCCceeeEECCCC-CEEEEecCCceEEEECC-CCCE---EEecCCCCCCCCceEEEcCCCC-
Confidence 31 1111222345678999999987 67777767889999998 4432 1112233456789999999987
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
++++...++.|..||. ++.. . .... ..+...+..+++.++++++++...++.|.+||. . ..........+...
T Consensus 154 l~v~~~~~~~i~~~~~-~g~~-~-~~~~-~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~--g~~~~~~~~~~~~~ 226 (299)
T 2z2n_A 154 LWFTENQNNAIGRITE-SGDI-T-EFKI-PTPASGPVGITKGNDDALWFVEIIGNKIGRITT-S--GEITEFKIPTPNAR 226 (299)
T ss_dssp EEEEETTTTEEEEECT-TCCE-E-EEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T--CCEEEEECSSTTCC
T ss_pred EEEEeCCCCEEEEEcC-CCcE-E-EeeC-CCCCCcceeEEECCCCCEEEEccCCceEEEECC-C--CcEEEEECCCCCCC
Confidence 6776666789999998 3221 1 1112 234556889999999997777767889999998 3 11111223345577
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
+.++++.+++ +++++...++.|..||.. ... .......+...+.++.+ +++ .+.+++..++
T Consensus 227 ~~~i~~~~~g-~l~v~~~~~~~i~~~d~~-g~~---------------~~~~~~~~~~~~~~i~~-~~g-~l~v~~~~~~ 287 (299)
T 2z2n_A 227 PHAITAGAGI-DLWFTEWGANKIGRLTSN-NII---------------EEYPIQIKSAEPHGICF-DGE-TIWFAMECDK 287 (299)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEEETT-TEE---------------EEEECSSSSCCEEEEEE-CSS-CEEEEETTTE
T ss_pred ceeEEECCCC-CEEEeccCCceEEEECCC-Cce---------------EEEeCCCCCCccceEEe-cCC-CEEEEecCCc
Confidence 8999999987 466655567889999983 210 11111122346888888 664 4555655666
Q ss_pred eEEEEeC
Q psy4510 494 FNIFRTI 500 (812)
Q Consensus 494 ~~~~~~~ 500 (812)
+..++..
T Consensus 288 l~~~~~~ 294 (299)
T 2z2n_A 288 IGKLTLI 294 (299)
T ss_dssp EEEEEEC
T ss_pred EEEEEcC
Confidence 6666543
No 186
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.50 E-value=2.6e-11 Score=126.03 Aligned_cols=238 Identities=11% Similarity=0.059 Sum_probs=165.8
Q ss_pred CCCeeeeeEcCCCCcEEEeeCC------------------------CceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEE
Q psy4510 223 TNSAEDLQWSDLKTALQTVDDP------------------------FQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFA 277 (812)
Q Consensus 223 ~~~V~~l~~s~~~~~l~s~~~d------------------------~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~ 277 (812)
-+.+.+|+++++|+.+++...+ +.|.+||..++ +.+..+. ++......
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g-------~~~~~~~~~~~~~p~g 95 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNA-------EILQSSGKNLFYLPHG 95 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTC-------CEEEEECTTTCSSEEE
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCC-------eEEeccCCCccCCceE
Confidence 4679999999999988887766 47999998765 3333333 34467899
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccc---------cCCCCCEEEEEEcC-CCCeEEEEEE-CCCeEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPL---------VGHTNSVEDLQWSP-GEKRVLASCS-VDLSIRI 346 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~---------~~h~~~v~~~~~~p-~~~~~l~s~~-~dg~i~i 346 (812)
++++|++ .++++...++.|++|+...... ....+ .++......++++| ++. ++++.+ .++.|++
T Consensus 96 ia~d~~g-~l~v~d~~~~~v~~~~~~g~~~---~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~-lyv~d~~~~~~I~~ 170 (329)
T 3fvz_A 96 LSIDTDG-NYWVTDVALHQVFKLDPHSKEG---PLLILGRSMQPGSDQNHFCQPTDVAVEPSTGA-VFVSDGYCNSRIVQ 170 (329)
T ss_dssp EEECTTS-CEEEEETTTTEEEEECTTCSSC---CSEEESBTTBCCCSTTCCSSEEEEEECTTTCC-EEEEECSSCCEEEE
T ss_pred EEECCCC-CEEEEECCCCEEEEEeCCCCeE---EEEEecccCCCCCCccccCCCcEEEEeCCCCe-EEEEeCCCCCeEEE
Confidence 9999998 6888888889999999865421 11111 24455789999999 565 777776 6999999
Q ss_pred EECCCCCcccceeecC---------CcCCCCeEEEEEcCC-CCEEEEEeCCCcEEEEecCCCCCCCceEEc--ccCCCCE
Q psy4510 347 WDTRVINTKSCMLTLP---------NAHTSDVNVISWNRT-EPLIVSGGDDGCIHVWDLRRFKKGSSVATF--KHHTAPV 414 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~---------~~~~~~v~~l~~~~~-~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~--~~h~~~v 414 (812)
|+.. ...+..+. .++-.....|+++|+ +.++++...++.|++||.. .++.+..+ ..+...+
T Consensus 171 ~~~~----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~ 243 (329)
T 3fvz_A 171 FSPS----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTD---TKEFVREIKHASFGRNV 243 (329)
T ss_dssp ECTT----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETT---TCCEEEEECCTTTTTCE
T ss_pred EcCC----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECC---CCcEEEEEeccccCCCc
Confidence 9953 22233331 112234889999998 6788888889999999996 36666666 3456788
Q ss_pred EEEEEccCCCcEEEEEE-------CCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee----cCCCceeEEEEcCCCC
Q psy4510 415 TTVEWHPTESSTFASGG-------ADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH----LGQKEIKELHWHPQLP 483 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~-------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~v~~~~~~p~~~ 483 (812)
.+++|+| + ..+++.+ .+.+|++||+...+ ++... .....+..++++|++
T Consensus 244 ~~~~~~p-g-~~~~~~g~~~v~~~~~~~v~~~~~~~g~-----------------~~~~~~~~~~~~~~p~~ia~~~dG- 303 (329)
T 3fvz_A 244 FAISYIP-G-FLFAVNGKPYFGDQEPVQGFVMNFSSGE-----------------IIDVFKPVRKHFDMPHDIVASEDG- 303 (329)
T ss_dssp EEEEEET-T-EEEEEECCCCTTCSCCCCEEEEETTTCC-----------------EEEEECCSSSCCSSEEEEEECTTS-
T ss_pred ceeeecC-C-EEEEeCCCEEeccCCCcEEEEEEcCCCe-----------------EEEEEcCCCCccCCeeEEEECCCC-
Confidence 9999999 3 3444433 24489999988773 33322 223468899999997
Q ss_pred CEEEEEe-CCCeEEEEe
Q psy4510 484 GTIISTA-NSGFNIFRT 499 (812)
Q Consensus 484 ~~~~~~~-~~~~~~~~~ 499 (812)
.++++.. .+.+.+|..
T Consensus 304 ~lyvad~~~~~I~~~~~ 320 (329)
T 3fvz_A 304 TVYIGDAHTNTVWKFTL 320 (329)
T ss_dssp EEEEEESSSCCEEEEEE
T ss_pred CEEEEECCCCEEEEEeC
Confidence 4555554 444556543
No 187
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.48 E-value=9e-12 Score=127.54 Aligned_cols=239 Identities=13% Similarity=0.060 Sum_probs=160.5
Q ss_pred cCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 219 LGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+..+.....+++|+|+++ .++++..++.|.+|+..+ . ...+..+...+.+++++|++ .++++...++.|
T Consensus 23 l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~--------~-~~~~~~~~~~~~~l~~~~dg-~l~v~~~~~~~i 92 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDG--------Q-LSPEMHPSHHQNGHCLNKQG-HLIACSHGLRRL 92 (296)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTS--------C-EEEEESSCSSEEEEEECTTC-CEEEEETTTTEE
T ss_pred EecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCC--------C-eEEEECCCCCcceeeECCCC-cEEEEecCCCeE
Confidence 334556678999999998 677778889999999876 3 56667777889999999998 677777667899
Q ss_pred EEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEEC-----------------CCeEEEEECCCCCccccee
Q psy4510 298 HIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSV-----------------DLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~-----------------dg~i~iwd~~~~~~~~~~~ 359 (812)
.+||..++..... .....+ ....+++++++|+|+ ++++.+. .+.|..++.. + .+.
T Consensus 93 ~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~-l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g----~~~ 165 (296)
T 3e5z_A 93 ERQREPGGEWESI-ADSFEGKKLNSPNDVCLAPDGS-LWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G----TLS 165 (296)
T ss_dssp EEECSTTCCEEEE-ECEETTEECCCCCCEEECTTSC-EEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S----CEE
T ss_pred EEEcCCCCcEEEE-eeccCCCCCCCCCCEEECCCCC-EEEECCccccccccccccccccCCCcEEEEECCC-C----CEE
Confidence 9999977652111 111111 123577899999998 6776321 2455555543 1 122
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc---eEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS---VATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~---~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
.+ ..+....+.++|+|+++++++.+.++.|.+|++.. .+.. ...+..+...+.++++.++| +++++. ++.|
T Consensus 166 ~~-~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~--~g~~~~~~~~~~~~~~~p~~i~~d~~G-~l~v~~--~~~v 239 (296)
T 3e5z_A 166 AP-IRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA--RGETEYQGVHFTVEPGKTDGLRVDAGG-LIWASA--GDGV 239 (296)
T ss_dssp EE-ECCCSSEEEEEECTTSCEEEEETTTTEEEEEEECS--SSCEEEEEEEECCSSSCCCSEEEBTTS-CEEEEE--TTEE
T ss_pred Ee-ecCCCCCccEEECCCCCEEEEeCCCCeEEEEEECC--CCcCcCCCeEeeCCCCCCCeEEECCCC-CEEEEc--CCeE
Confidence 22 34556679999999999778888889999999963 2222 22333355567789999997 455554 7889
Q ss_pred EEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCCeEEEEe
Q psy4510 437 ALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSGFNIFRT 499 (812)
Q Consensus 437 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~~~~~~~ 499 (812)
.+||.... .+........ +.+++|. |++..+++ ++.+++..++.
T Consensus 240 ~~~~~~g~-----------------~~~~~~~~~~-~~~~~f~~~d~~~L~v-~t~~~l~~~~~ 284 (296)
T 3e5z_A 240 HVLTPDGD-----------------ELGRVLTPQT-TSNLCFGGPEGRTLYM-TVSTEFWSIET 284 (296)
T ss_dssp EEECTTSC-----------------EEEEEECSSC-CCEEEEESTTSCEEEE-EETTEEEEEEC
T ss_pred EEECCCCC-----------------EEEEEECCCC-ceeEEEECCCCCEEEE-EcCCeEEEEEc
Confidence 99998633 2223333334 8899994 66644444 44566555544
No 188
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.48 E-value=1.4e-12 Score=136.95 Aligned_cols=223 Identities=9% Similarity=0.092 Sum_probs=149.5
Q ss_pred CceEEEEeCCCCCCeEEEecCC---C--cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-------
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCK---R--NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------- 244 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~d---g--~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------- 244 (812)
..+..++||| +|+.||.++.+ + .|.+|++.+++. . .+..+.. +.+++|+|+|+.|+.++.+
T Consensus 59 ~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~l~~~~~~~g~~----~-~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~ 131 (347)
T 2gop_A 59 ENATMPRISP-DGKKIAFMRANEEKKVSEIWVADLETLSS----K-KILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDF 131 (347)
T ss_dssp ESCEEEEECT-TSSEEEEEEEETTTTEEEEEEEETTTTEE----E-EEEEESE-EEEEEECTTSSEEEEEEECCCC----
T ss_pred ccCCCeEECC-CCCEEEEEEeccCCCcceEEEEECCCCce----E-EEEcCCC-ccceeECCCCCEEEEEEccCCCcCCc
Confidence 4577899999 99999877643 3 377778776542 2 2222333 9999999999999888642
Q ss_pred --------------------CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-------cE
Q psy4510 245 --------------------FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-------NI 297 (812)
Q Consensus 245 --------------------~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-------~i 297 (812)
..|.+|++.++ +.+..+.. . .+..++|+|++ +++++..++ ..
T Consensus 132 ~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~-------~~~~~l~~-~-~~~~~~~spdg--~~~~~~~~~~~~~~~~~~ 200 (347)
T 2gop_A 132 IFEDDVPAWFDDLGFFDGEKTTFWIFDTESE-------EVIEEFEK-P-RFSSGIWHRDK--IVVNVPHREIIPQYFKFW 200 (347)
T ss_dssp -----CCCC---------CEEEEEEEETTTT-------EEEEEEEE-E-TTCEEEEETTE--EEEEEECCCSSCCSSCCE
T ss_pred EEEcccceeecCcccccCccceEEEEECCCC-------eEEeeecC-C-CcccccCCCCe--EEEEEecccccccccccc
Confidence 56888998774 33234443 3 77899999997 766665542 44
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCe
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDV 369 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v 369 (812)
.||.+. .+. ...+..+ ..+..+ +|+|+. |+.++.+ ..|.+|| ++ . ...+...+...+
T Consensus 201 ~l~~~d-~~~----~~~l~~~-~~~~~~--spdg~~-l~~~~~~~~~~~~~~~~l~~~d--~~---~-~~~l~~~~~~~~ 265 (347)
T 2gop_A 201 DIYIWE-DGK----EEKMFEK-VSFYAV--DSDGER-ILLYGKPEKKYMSEHNKLYIYD--GK---E-VMGILDEVDRGV 265 (347)
T ss_dssp EEEEEE-TTE----EEEEEEE-ESEEEE--EECSSC-EEEEECCSSSCCCSSCEEEEEC--SS---C-EEESSTTCCSEE
T ss_pred cEEEeC-CCc----eEEeccC-cceeeE--CCCCCE-EEEEEccccCCccccceEEEEC--CC---c-eEeccccCCccc
Confidence 555554 331 2233334 445544 999996 5555433 4678887 22 1 233335566778
Q ss_pred EE-EEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE-EEEEcC
Q psy4510 370 NV-ISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI-ALWDLA 442 (812)
Q Consensus 370 ~~-l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v-~iwd~~ 442 (812)
.. +.|+ ++ ++++++.++.++|| +. .+.. ..+..+...|.+++|+| .++++++.++.. .+|.+.
T Consensus 266 ~~~~~~s-dg-~~~~~~~~~~~~l~-~~---~g~~-~~~~~~~~~v~~~~~s~---~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 266 GQAKIKD-GK-VYFTLFEEGSVNLY-IW---DGEI-KPIAKGRHWIMGFDVDE---IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp EEEEEET-TE-EEEEEEETTEEEEE-EE---SSSE-EEEECSSSEEEEEEESS---SEEEEEECSSSCCEEEEES
T ss_pred CCccEEc-Cc-EEEEEecCCcEEEE-Ec---CCce-EEEecCCCeEEeeeeeC---cEEEEEcCCCChHHheEeC
Confidence 86 9999 88 99999999999999 86 2333 33444577899999998 377777777665 788775
No 189
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.47 E-value=1.6e-11 Score=141.72 Aligned_cols=163 Identities=9% Similarity=-0.032 Sum_probs=105.4
Q ss_pred CCCCcEEEEEecCCCCCEEE-----EEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCe-
Q psy4510 270 GHLTEGFAMDWSSTEPGVLA-----TGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLS- 343 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~-----sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~- 343 (812)
+|...+.+++|||+| .+|| .|+.+..|++||+.++... ....+... ....++|+|+++. |+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG-~~la~~~~~~G~~~~~i~v~dl~tg~~~--~~~~~~~~--~~~~~~wspDg~~-l~~~~~d~~~ 191 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDG-KKVAFAQKPNAADEAVLHVIDVDSGEWS--KVDVIEGG--KYATPKWTPDSKG-FYYEWLPTDP 191 (695)
T ss_dssp SSCEEEEEEEECTTS-SEEEEEEEETTCSCCEEEEEETTTCCBC--SSCCBSCC--TTCCCEECTTSSE-EEEEECCCCT
T ss_pred CCCEEEEEEEECCCC-CEEEEEECCCCCceEEEEEEECCCCCCc--CCcccCcc--cccceEEecCCCE-EEEEEecCCC
Confidence 455578999999999 5666 3334568999999988621 01111111 1268999999994 777777665
Q ss_pred ------------EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC----cEEEEecCCCCCCCceEEc
Q psy4510 344 ------------IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG----CIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 344 ------------i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg----~i~iwd~~~~~~~~~~~~~ 407 (812)
|++|++.++.....+......+...+..+.|+|+|++|+.++.++ .|.+|+.. ......+
T Consensus 192 ~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~----~~~~~~l 267 (695)
T 2bkl_A 192 SIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPG----EKDFRLL 267 (695)
T ss_dssp TSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTT----CSSCEEE
T ss_pred CCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCC----CCceEEe
Confidence 999999865432222222244566889999999999777766555 56666543 2234555
Q ss_pred ccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 408 KHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 408 ~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
..+...+....| +++. +++++.. ++.|.+||+...
T Consensus 268 ~~~~~~~~~~~~-~~g~-l~~~s~~~~~~~~l~~~d~~~~ 305 (695)
T 2bkl_A 268 VKGVGAKYEVHA-WKDR-FYVLTDEGAPRQRVFEVDPAKP 305 (695)
T ss_dssp EECSSCCEEEEE-ETTE-EEEEECTTCTTCEEEEEBTTBC
T ss_pred ecCCCceEEEEe-cCCc-EEEEECCCCCCCEEEEEeCCCC
Confidence 556666666666 5665 5555442 467778877554
No 190
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.43 E-value=3.2e-11 Score=139.69 Aligned_cols=241 Identities=9% Similarity=-0.066 Sum_probs=153.6
Q ss_pred CCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 220 GGHTNSAEDLQWSDLKTALQTVDDPF-----QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 220 ~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
.+|...+..++|||||++|+.+..++ .|++||+.++ +.+..... ...+..++|+|++ ..|+.++.+
T Consensus 121 ~~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg-------~~~~~~~~-~~~~~~~~wspDg-~~l~~~~~~ 191 (710)
T 2xdw_A 121 DDGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGA-------KELPDVLE-RVKFSCMAWTHDG-KGMFYNAYP 191 (710)
T ss_dssp TTSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTT-------EEEEEEEE-EECSCCEEECTTS-SEEEEEECC
T ss_pred cCCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCC-------CCCccccc-CcccceEEEEeCC-CEEEEEEEC
Confidence 35666789999999999998776433 8999999886 32221111 1225679999999 677777766
Q ss_pred Cc----------------EEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCC---
Q psy4510 295 RN----------------IHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRV--- 351 (812)
Q Consensus 295 g~----------------i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~--- 351 (812)
+. |++|++.++............|...+..+.|+|+|+.++++... +..|++||+.+
T Consensus 192 ~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 192 QQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp CCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSS
T ss_pred CccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECccccc
Confidence 65 99999987652111222223355668899999999965554432 57899999874
Q ss_pred ---CCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC----CcEEEEecCCCCCCCceEEcccCCC--CEEEEEEccC
Q psy4510 352 ---INTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD----GCIHVWDLRRFKKGSSVATFKHHTA--PVTTVEWHPT 422 (812)
Q Consensus 352 ---~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----g~i~iwd~~~~~~~~~~~~~~~h~~--~v~~v~~~p~ 422 (812)
+.. ....+ ..+...+.. .|+++|..|+..+.. +.|.+||+..... .....+..|.. .+..+.|++.
T Consensus 272 ~~~~~~--~~~~l-~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~ 346 (710)
T 2xdw_A 272 GITGIL--KWVKL-IDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEE-SKWKVLVPEHEKDVLEWVACVRS 346 (710)
T ss_dssp SSCSSC--CCEEE-ECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCEEEEEEEETT
T ss_pred ccCCcc--ceEEe-eCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCc-ccceeccCCCCCCeEEEEEEEcC
Confidence 211 23333 334444444 478888866655543 3699999874210 12344444544 6888999865
Q ss_pred CCcEEEEEECCCC--EEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 423 ESSTFASGGADDQ--IALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 423 ~~~~l~s~~~dg~--v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
+ .++++...++. |.+|++..++ .+.........+..+.++|++..++++.+.
T Consensus 347 ~-~lv~~~~~~g~~~l~~~~~~~g~----------------~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss 400 (710)
T 2xdw_A 347 N-FLVLCYLHDVKNTLQLHDLATGA----------------LLKIFPLEVGSVVGYSGQKKDTEIFYQFTS 400 (710)
T ss_dssp T-EEEEEEEETTEEEEEEEETTTCC----------------EEEEECCCSSEEEEEECCTTCSEEEEEEEC
T ss_pred C-EEEEEEEECCEEEEEEEECCCCC----------------EEEecCCCCceEEEEecCCCCCEEEEEEeC
Confidence 4 68888888885 5566664442 111222224567888999987666665544
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.41 E-value=3.7e-11 Score=124.06 Aligned_cols=251 Identities=7% Similarity=0.053 Sum_probs=166.4
Q ss_pred CCCceEEEEeCCCCCCeEEE-------ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC-CCcEEEeeCCCc
Q psy4510 175 HLTEGFAMDWSSTEPGVLAT-------GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL-KTALQTVDDPFQ 246 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat-------~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~-~~~l~s~~~d~~ 246 (812)
......+++|++ +++++++ +..++.|.+|+..+++..........++...+.+++++++ ++++++.. .+.
T Consensus 16 ~~~~~~~~~~~~-~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~ 93 (314)
T 1pjx_A 16 DIPGAEGPVFDK-NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-RLG 93 (314)
T ss_dssp CCTTCEEEEECT-TSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-TTE
T ss_pred cCCCccCceECC-CCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-CCC
Confidence 334567899998 9998888 6778899999987765321111111235577999999999 76555443 447
Q ss_pred eEEeeCCCCCCCCCCCCCc-eEE-cC-CCCcEEEEEecCCCCCEEEEEeCC---------------CcEEEEeCCCCCcc
Q psy4510 247 LAEHNKKRGKGPGIPTPPL-FSF-SG-HLTEGFAMDWSSTEPGVLATGDCK---------------RNIHIWTPREAGAW 308 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~-~~~-~~-h~~~v~~l~~sp~~~~~l~sg~~d---------------g~i~vwd~~~~~~~ 308 (812)
|.+|+.. +. ...+ ... .+ ....+.++++.+++ .++++...+ +.|..|+.. +.
T Consensus 94 l~~~d~~-g~-----~~~~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~-- 163 (314)
T 1pjx_A 94 LLVVQTD-GT-----FEEIAKKDSEGRRMQGCNDCAFDYEG-NLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQ-- 163 (314)
T ss_dssp EEEEETT-SC-----EEECCSBCTTSCBCBCCCEEEECTTS-CEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SC--
T ss_pred EEEEeCC-CC-----EEEEEeccCCCccccCCcCEEECCCC-CEEEEecCcccccccccccccCCCCeEEEECCC-CC--
Confidence 8889877 41 1111 100 11 12357899999998 666666544 467777765 32
Q ss_pred eeccccccCCCCCEEEEEEc----CCCCeEEEEEECCCeEEEEECCCCCcc---cceeecCCcCC-CCeEEEEEcCCCCE
Q psy4510 309 QVDQKPLVGHTNSVEDLQWS----PGEKRVLASCSVDLSIRIWDTRVINTK---SCMLTLPNAHT-SDVNVISWNRTEPL 380 (812)
Q Consensus 309 ~~~~~~~~~h~~~v~~~~~~----p~~~~~l~s~~~dg~i~iwd~~~~~~~---~~~~~~~~~~~-~~v~~l~~~~~~~~ 380 (812)
...+..+......++|+ |+++.++++...++.|.+||+...... .....+ ..+. ..+..++++++|++
T Consensus 164 ---~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~-~~~~~~~p~~i~~d~~G~l 239 (314)
T 1pjx_A 164 ---MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHI-PGTHEGGADGMDFDEDNNL 239 (314)
T ss_dssp ---EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEEC-CCCSSCEEEEEEEBTTCCE
T ss_pred ---EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEEC-CCCCCCCCCceEECCCCCE
Confidence 11222233457889999 999766666667899999997521111 112222 2333 56788999999998
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+++...++.|.+||.. +++.+..+..+...+.+++|+|++..++++...++.|..|++...
T Consensus 240 ~v~~~~~~~i~~~d~~---~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 240 LVANWGSSHIEVFGPD---GGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEETTTEEEEECTT---CBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEcCCCEEEEEcCC---CCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 8888788899999986 245556666666789999999987435555556678999998754
No 192
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.39 E-value=9.3e-10 Score=112.51 Aligned_cols=279 Identities=10% Similarity=-0.036 Sum_probs=186.9
Q ss_pred CCCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCC
Q psy4510 175 HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKR 254 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~ 254 (812)
....+.++++.+ +|++.++...++.|.+|+.. ++. ....+..+...+.++++.++++..++...++.|.+++..
T Consensus 18 ~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~-~~~---~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~- 91 (300)
T 2qc5_A 18 PDSGPYGITSSE-DGKVWFTQHKANKISSLDQS-GRI---KEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK- 91 (300)
T ss_dssp TTCCEEEEEECT-TSCEEEEETTTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCCcceeeECC-CCCEEEEcCCCCeEEEECCC-Cce---EEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-
Confidence 346788999999 89988888778999999987 432 112233445678999999999877777667889999876
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
+ . .....+......+.++++.+++ .++++...++.|..++.. +.. ....+......+.++++.++++ +
T Consensus 92 g-----~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~~-g~~---~~~~~~~~~~~~~~i~~d~~g~-l 159 (300)
T 2qc5_A 92 G-----G-FTEYPLPQPDSGPYGITEGLNG-DIWFTQLNGDRIGKLTAD-GTI---YEYDLPNKGSYPAFITLGSDNA-L 159 (300)
T ss_dssp S-----C-EEEEECSSTTCCEEEEEECSTT-CEEEEETTTTEEEEECTT-SCE---EEEECSSTTCCEEEEEECTTSS-E
T ss_pred C-----C-eEEecCCCCCCCCccceECCCC-CEEEEccCCCeEEEECCC-CCE---EEccCCCCCCCceeEEECCCCC-E
Confidence 3 1 1112223344678999999987 677776667899999987 432 1112233456789999999998 6
Q ss_pred EEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCce-EEcccCCCC
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAP 413 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~h~~~ 413 (812)
+++...++.|..+|.. +.. ..... ..+...+..+++.++++++++....+.|.+||.. +... ..+..+...
T Consensus 160 ~v~~~~~~~i~~~~~~-g~~--~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~ 231 (300)
T 2qc5_A 160 WFTENQNNSIGRITNT-GKL--EEYPL-PTNAAAPVGITSGNDGALWFVEIMGNKIGRITTT----GEISEYDIPTPNAR 231 (300)
T ss_dssp EEEETTTTEEEEECTT-CCE--EEEEC-SSTTCCEEEEEECTTSSEEEEETTTTEEEEECTT----CCEEEEECSSTTCC
T ss_pred EEEecCCCeEEEECCC-CcE--EEeeC-CCCCCCcceEEECCCCCEEEEccCCCEEEEEcCC----CcEEEEECCCCCCC
Confidence 7776667899999983 221 11222 2344678999999999877777677889999983 2222 223345567
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSG 493 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~ 493 (812)
+.++++.+++ +++++...++.|..||.. ... ...........+.++.+.+++. +.++... +
T Consensus 232 ~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~---------------~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~-~ 292 (300)
T 2qc5_A 232 PHAITAGKNS-EIWFTEWGANQIGRITND-NTI---------------QEYQLQTENAEPHGITFGKDGS-VWFALKC-K 292 (300)
T ss_dssp EEEEEECSTT-CEEEEETTTTEEEEECTT-SCE---------------EEEECCSTTCCCCCEEECTTSC-EEEECSS-E
T ss_pred ceEEEECCCC-CEEEeccCCCeEEEECCC-CcE---------------EEEECCccCCccceeEeCCCCC-EEEEccC-c
Confidence 8999999987 466665556889999973 311 1111112234578888888864 4444443 4
Q ss_pred eEEEE
Q psy4510 494 FNIFR 498 (812)
Q Consensus 494 ~~~~~ 498 (812)
+..+.
T Consensus 293 i~~~~ 297 (300)
T 2qc5_A 293 IGKLN 297 (300)
T ss_dssp EEEEE
T ss_pred eEEeC
Confidence 44443
No 193
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.37 E-value=1.2e-10 Score=117.19 Aligned_cols=235 Identities=6% Similarity=-0.044 Sum_probs=155.2
Q ss_pred CeeeeeEcCCCCcEE-EeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 225 SAEDLQWSDLKTALQ-TVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~-s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
...+++++++++.++ +...++.|.+|+..+. ........+...+.++++.+++ .++++.. ++.|.+|+..
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~-------~~~~~~~~~~~~p~~i~~~~~g-~l~v~~~-~~~i~~~d~~ 95 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGST-------GTTVLPFNGLYQPQGLAVDGAG-TVYVTDF-NNRVVTLAAG 95 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC------------EECCCCSCCSCCCEEECTTC-CEEEEET-TTEEEEECTT
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCc-------ccceEeeCCcCCcceeEECCCC-CEEEEcC-CCEEEEEeCC
Confidence 677899999998666 4467889999987653 1111112233567889999988 5665555 8899999987
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
.... ..........+.++++.+++. ++++...++.|.+|+.... ...... ......+..++++++++++++
T Consensus 96 ~~~~----~~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~i~~~~~~~~---~~~~~~-~~~~~~p~~i~~~~~g~l~v~ 166 (270)
T 1rwi_B 96 SNNQ----TVLPFDGLNYPEGLAVDTQGA-VYVADRGNNRVVKLAAGSK---TQTVLP-FTGLNDPDGVAVDNSGNVYVT 166 (270)
T ss_dssp CSCC----EECCCCSCSSEEEEEECTTCC-EEEEEGGGTEEEEECTTCC---SCEECC-CCSCCSCCCEEECTTCCEEEE
T ss_pred CceE----eeeecCCcCCCcceEECCCCC-EEEEECCCCEEEEEECCCc---eeEeec-cccCCCceeEEEeCCCCEEEE
Confidence 6542 111112335789999999987 7777777899999976532 111111 233346788999999997777
Q ss_pred EeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
...++.|.+||... .........+...+.+|++.+++ .++++...++.|.+|+...... .
T Consensus 167 ~~~~~~i~~~~~~~---~~~~~~~~~~~~~p~~i~~d~~g-~l~v~~~~~~~v~~~~~~~~~~----------------~ 226 (270)
T 1rwi_B 167 DTDNNRVVKLEAES---NNQVVLPFTDITAPWGIAVDEAG-TVYVTEHNTNQVVKLLAGSTTS----------------T 226 (270)
T ss_dssp EGGGTEEEEECTTT---CCEEECCCSSCCSEEEEEECTTC-CEEEEETTTSCEEEECTTCSCC----------------E
T ss_pred ECCCCEEEEEecCC---CceEeecccCCCCceEEEECCCC-CEEEEECCCCcEEEEcCCCCcc----------------e
Confidence 77788999999863 22222223334678999999987 6777777788999999865521 1
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCC-CeEEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANS-GFNIFR 498 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~-~~~~~~ 498 (812)
.....+...+..+++++++. ++++...+ .+.+|.
T Consensus 227 ~~~~~~~~~p~~i~~~~~g~-l~v~~~~~~~v~~~~ 261 (270)
T 1rwi_B 227 VLPFTGLNTPLAVAVDSDRT-VYVADRGNDRVVKLT 261 (270)
T ss_dssp ECCCCSCSCEEEEEECTTCC-EEEEEGGGTEEEEEC
T ss_pred eeccCCCCCceeEEECCCCC-EEEEECCCCEEEEEc
Confidence 11112224688999999975 55555544 444543
No 194
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.36 E-value=1.9e-09 Score=110.11 Aligned_cols=271 Identities=10% Similarity=0.010 Sum_probs=176.6
Q ss_pred cCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEE
Q psy4510 219 LGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIH 298 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~ 298 (812)
+..+...+.+++++++|+.+++...++.|.+|+.. + . .....+..+...+.++++.+++ .++++...++.|.
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~-----~-~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~ 81 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-G-----K-ITEYPLPTPDAKVMCLTISSDG-EVWFTENAANKIG 81 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-C-----C-EEEEECSSTTCCEEEEEECTTS-CEEEEETTTTEEE
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-C-----C-eEEecCCcccCceeeEEECCCC-CEEEeCCCCCeEE
Confidence 33455689999999999977776668899999977 3 1 1111222345678999999988 6777766678899
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
.|+.. +.. ....+......+.++++.+++. ++++...++.|.+||.. +. ...... ..+...+..+++.+++
T Consensus 82 ~~~~~-g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~~-g~--~~~~~~-~~~~~~~~~i~~~~~g 152 (299)
T 2z2n_A 82 RITKK-GII---KEYTLPNPDSAPYGITEGPNGD-IWFTEMNGNRIGRITDD-GK--IREYEL-PNKGSYPSFITLGSDN 152 (299)
T ss_dssp EECTT-SCE---EEEECSSTTCCEEEEEECTTSC-EEEEETTTTEEEEECTT-CC--EEEEEC-SSTTCCEEEEEECTTS
T ss_pred EECCC-CcE---EEEeCCCcCCCceeeEECCCCC-EEEEecCCceEEEECCC-CC--EEEecC-CCCCCCCceEEEcCCC
Confidence 99986 321 1112223456789999999887 67777678899999983 22 111222 2345678999999999
Q ss_pred CEEEEEeCCCcEEEEecCCCCCCCceE-EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 379 PLIVSGGDDGCIHVWDLRRFKKGSSVA-TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 379 ~~l~sg~~dg~i~iwd~~~~~~~~~~~-~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
.++++...++.|.+||. . +.... .+..+...+.++++.+++ .++++...++.|.+||. ....
T Consensus 153 ~l~v~~~~~~~i~~~~~-~---g~~~~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~i~~~~~-~g~~----------- 215 (299)
T 2z2n_A 153 ALWFTENQNNAIGRITE-S---GDITEFKIPTPASGPVGITKGNDD-ALWFVEIIGNKIGRITT-SGEI----------- 215 (299)
T ss_dssp CEEEEETTTTEEEEECT-T---CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECT-TCCE-----------
T ss_pred CEEEEeCCCCEEEEEcC-C---CcEEEeeCCCCCCcceeEEECCCC-CEEEEccCCceEEEECC-CCcE-----------
Confidence 88887777789999998 2 22222 233445678899999986 46666656788999998 4421
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCEEEEE-eCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEe
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGTIIST-ANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 533 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~ 533 (812)
...........+..+++++++. ++++. ..+++.+|+. .. .........+...+.++++ ++ +.+..+
T Consensus 216 ----~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~d~-~g-~~~~~~~~~~~~~~~~i~~-~~--g~l~v~ 282 (299)
T 2z2n_A 216 ----TEFKIPTPNARPHAITAGAGID-LWFTEWGANKIGRLTS-NN-IIEEYPIQIKSAEPHGICF-DG--ETIWFA 282 (299)
T ss_dssp ----EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEEET-TT-EEEEEECSSSSCCEEEEEE-CS--SCEEEE
T ss_pred ----EEEECCCCCCCceeEEECCCCC-EEEeccCCceEEEECC-CC-ceEEEeCCCCCCccceEEe-cC--CCEEEE
Confidence 1111112235688999999865 55555 4456677765 22 2122212233457888888 66 444443
No 195
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.36 E-value=3.4e-11 Score=140.04 Aligned_cols=249 Identities=13% Similarity=0.009 Sum_probs=161.2
Q ss_pred CCCCceEEEEeCCCCCCeEEEecCC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCc--
Q psy4510 174 GHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQ-- 246 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat~~~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~-- 246 (812)
+|...+..++||| +|++||.++.+ ..|++||+.+++... ...+...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SP-DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~-----~~~~~~~~~~~~wspD-~~l~~~~~~~~~~ 232 (741)
T 1yr2_A 160 DGATALDAWAASD-DGRLLAYSVQDGGSDWRTVKFVGVADGKPLA-----DELKWVKFSGLAWLGN-DALLYSRFAEPKE 232 (741)
T ss_dssp ---EEEEEEEECT-TSSEEEEEEEETTCSEEEEEEEETTTCCEEE-----EEEEEEESCCCEESTT-SEEEEEECCCC--
T ss_pred CCCEEEEeEEECC-CCCEEEEEEcCCCCceEEEEEEECCCCCCCC-----ccCCCceeccEEEECC-CEEEEEEecCccc
Confidence 4545788999999 99999876543 469999999887421 1112223468999999 99988876543
Q ss_pred ------------eEEeeCCCCCCCCCCCCCceEEc--CCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCc
Q psy4510 247 ------------LAEHNKKRGKGPGIPTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGA 307 (812)
Q Consensus 247 ------------i~vwd~~~~~~~~~~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~ 307 (812)
|++|++.++ .......+. .+...+..+.|||+| .+|+..+.+ ..|++||+.++..
T Consensus 233 ~~~~~~~~~~~~v~~~~lgt~-----~~~~~lv~~~~~~~~~~~~~~~SpDG-~~l~~~~~~~~~~~~~l~~~d~~~~~~ 306 (741)
T 1yr2_A 233 GQAFQALNYNQTVWLHRLGTP-----QSADQPVFATPELPKRGHGASVSSDG-RWVVITSSEGTDPVNTVHVARVTNGKI 306 (741)
T ss_dssp ------CCCCCEEEEEETTSC-----GGGCEEEECCTTCTTCEEEEEECTTS-CEEEEEEECTTCSCCEEEEEEEETTEE
T ss_pred ccccccCCCCCEEEEEECCCC-----chhCEEEeccCCCCeEEEEEEECCCC-CEEEEEEEccCCCcceEEEEECCCCCC
Confidence 888888764 111222333 333468899999999 566555543 3899999977521
Q ss_pred ceeccccccCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEE
Q psy4510 308 WQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 308 ~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~s 383 (812)
. ....+..+...+.... +|+++. |+..+. ++.|.+||+.... .....+...+...+..++|. ++.++++
T Consensus 307 ~--~~~~l~~~~~~~~~~~-~~dg~~-l~~~s~~~~~~~~l~~~d~~~~~--~~~~~l~~~~~~~l~~~~~~-~~~lv~~ 379 (741)
T 1yr2_A 307 G--PVTALIPDLKAQWDFV-DGVGDQ-LWFVSGDGAPLKKIVRVDLSGST--PRFDTVVPESKDNLESVGIA-GNRLFAS 379 (741)
T ss_dssp C--CCEEEECSSSSCEEEE-EEETTE-EEEEECTTCTTCEEEEEECSSSS--CEEEEEECCCSSEEEEEEEE-BTEEEEE
T ss_pred c--ccEEecCCCCceEEEE-eccCCE-EEEEECCCCCCCEEEEEeCCCCc--cccEEEecCCCCeEEEEEEE-CCEEEEE
Confidence 0 0233444444455553 488886 444443 4569999987532 12233324455557778887 5568888
Q ss_pred EeCCCcEEEEecCCCCCCCceEEccc-CCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 384 GGDDGCIHVWDLRRFKKGSSVATFKH-HTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 384 g~~dg~i~iwd~~~~~~~~~~~~~~~-h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
...++..+||.+.. .+..+..+.. +.+.|..+.++|++..++++.+. .++|.+||+.++
T Consensus 380 ~~~dg~~~l~~~~~--~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg 442 (741)
T 1yr2_A 380 YIHDAKSQVLAFDL--DGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATA 442 (741)
T ss_dssp EEETTEEEEEEEET--TSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTT
T ss_pred EEECCEEEEEEEeC--CCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCC
Confidence 88899888876642 2445566654 36678899999987656555443 468999999775
No 196
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.36 E-value=1.1e-10 Score=117.31 Aligned_cols=218 Identities=9% Similarity=-0.021 Sum_probs=156.6
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCC-CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCce
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLF 266 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~ 266 (812)
.+++|++++.++.|.+||.++++ .+..+..+. ..+.+++++|+|+.|+ +.++.|..||. ++ +.+.
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~----~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G-------~~~W 69 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKE----IVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DG-------RELW 69 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTE----EEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TS-------CEEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCe----EEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CC-------CEEE
Confidence 46899999999999999998877 455555555 5789999999999888 35678999998 54 6777
Q ss_pred EEcCCC-CcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccc-cccCCCCCEEEEEEcCCCCeEEEEEECCCe
Q psy4510 267 SFSGHL-TEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQK-PLVGHTNSVEDLQWSPGEKRVLASCSVDLS 343 (812)
Q Consensus 267 ~~~~h~-~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~-~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~ 343 (812)
.+..+. ..+.++.+.|++ +++++.+. ++.|..++......+..... ...++......+++.+++. ++++...++.
T Consensus 70 ~~~~~~~~~~~~~~~~~dG-~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~-~lv~~~~~~~ 147 (276)
T 3no2_A 70 NIAAPAGCEMQTARILPDG-NALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGN-YLVPLFATSE 147 (276)
T ss_dssp EEECCTTCEEEEEEECTTS-CEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSC-EEEEETTTTE
T ss_pred EEcCCCCccccccEECCCC-CEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCC-EEEEecCCCE
Confidence 777653 578899999999 77777776 67777777632211111111 1112223455667899998 6888889999
Q ss_pred EEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC------CCEEEE
Q psy4510 344 IRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT------APVTTV 417 (812)
Q Consensus 344 i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~------~~v~~v 417 (812)
|.+||.. ++ .+.++ .. .....++...++++++++++.++.|..+|.. +++.+..+..+. ..+.++
T Consensus 148 v~~~d~~-G~---~~w~~-~~-~~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~---tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 148 VREIAPN-GQ---LLNSV-KL-SGTPFSSAFLDNGDCLVACGDAHCFVQLNLE---SNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp EEEECTT-SC---EEEEE-EC-SSCCCEEEECTTSCEEEECBTTSEEEEECTT---TCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred EEEECCC-CC---EEEEE-EC-CCCccceeEcCCCCEEEEeCCCCeEEEEeCc---CCcEEEEecCCCCCCccccccccc
Confidence 9999986 43 34444 22 2345667888999999998888899999986 477777775432 237888
Q ss_pred EEccCCCcEEEEEE
Q psy4510 418 EWHPTESSTFASGG 431 (812)
Q Consensus 418 ~~~p~~~~~l~s~~ 431 (812)
...+++ .++++..
T Consensus 219 ~~~~~G-~i~v~~~ 231 (276)
T 3no2_A 219 FPLQNG-GLYICNW 231 (276)
T ss_dssp EECTTS-CEEEEEE
T ss_pred eEcCCC-CEEEEec
Confidence 888887 5666653
No 197
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.35 E-value=3e-09 Score=111.82 Aligned_cols=146 Identities=9% Similarity=-0.056 Sum_probs=96.2
Q ss_pred cCCCCCEEEEEeC--CC---cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEE
Q psy4510 281 SSTEPGVLATGDC--KR---NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRI 346 (812)
Q Consensus 281 sp~~~~~l~sg~~--dg---~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~i 346 (812)
.|++ .++.+... .. +|.++|..+++ ....+.....+ .++++|+++.++++.. .++.|.+
T Consensus 29 ~~~~-~~~yv~~~~~~~~~~~v~v~D~~t~~----~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~v 101 (373)
T 2mad_H 29 GADG-RRSYINLPAHHSAIIQQWVLDAGSGS----ILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEV 101 (373)
T ss_pred CCCC-CEEEEeCCcccCCccEEEEEECCCCe----EEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEE
Confidence 3555 55555442 22 88999998876 23333333333 9999999997555542 3678999
Q ss_pred EECCCCCcccceeecCCc------CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEE-cccCCCCEEEE
Q psy4510 347 WDTRVINTKSCMLTLPNA------HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVAT-FKHHTAPVTTV 417 (812)
Q Consensus 347 wd~~~~~~~~~~~~~~~~------~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~-~~~h~~~v~~v 417 (812)
||+.+... +..+... +......+.|+|+|++|+++.. ++.|.++| . .++.+.. +... + ++
T Consensus 102 iD~~t~~~---~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~---t~~~~~~~i~~~-~---~~ 170 (373)
T 2mad_H 102 FDPVTFLP---IADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-Q---GGSSDDQLLSSP-T---CY 170 (373)
T ss_pred EECCCCcE---EEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-C---CCCEEeEEcCCC-c---eE
Confidence 99975432 2322111 1123457999999998888764 57899999 7 4566666 5422 2 24
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+.|.+.+.+++.+.||.+.++|. ..+
T Consensus 171 ~~~~~~~~~~~~~~~dg~~~~vd~-~g~ 197 (373)
T 2mad_H 171 HIHPGAPSTFYLLCAQGGLAKTDH-AGG 197 (373)
T ss_pred EEEeCCCceEEEEcCCCCEEEEEC-CCc
Confidence 566777677888888999999999 653
No 198
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.34 E-value=2.2e-10 Score=117.12 Aligned_cols=232 Identities=12% Similarity=0.066 Sum_probs=155.5
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
.-+..|+|.++.++++...++.|+.||..++... .......+.+++++++++++++ . ++.|.+|+..++
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~------~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g--- 83 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ------RVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQ--- 83 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE------EEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTT---
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE------EEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCC---
Confidence 4468899955677888888899999998876521 1123467999999999995554 3 567899998764
Q ss_pred CCCCCCceEEcC--CCCcEEEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 259 GIPTPPLFSFSG--HLTEGFAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 259 ~~~~~~~~~~~~--h~~~v~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
..+.+..... ....+..+++.|+| .++++... .....||.+..... ...+..+....+.++|
T Consensus 84 --~~~~~~~~~~~~~~~~~~di~~d~dG-~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~----~~~~~~~~~~pngi~~ 156 (297)
T 3g4e_A 84 --SAVVLATVDNDKKNNRFNDGKVDPAG-RYFAGTMAEETAPAVLERHQGALYSLFPDHH----VKKYFDQVDISNGLDW 156 (297)
T ss_dssp --EEEEEEECCTTCSSEEEEEEEECTTS-CEEEEEEECCSBTTBCCTTCEEEEEECTTSC----EEEEEEEESBEEEEEE
T ss_pred --cEEEEEecCCCCCCCCCCCEEECCCC-CEEEecCCcccccccccCCCcEEEEEECCCC----EEEEeeccccccceEE
Confidence 1111111111 12357899999998 55554422 13345665554332 1112233345789999
Q ss_pred cCCCCeEEEEEECCCeEEEEECC--CCCc--ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR--VINT--KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS 403 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~--~~~~--~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~ 403 (812)
+|+++.++++.+.++.|.+|++. ++.. ...+..+ ..+......+++.++|++.++....+.|.+||.. +++.
T Consensus 157 spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~-~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~---tG~~ 232 (297)
T 3g4e_A 157 SLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKL-EKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPV---TGKR 232 (297)
T ss_dssp CTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEEC-CGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTT---TCCE
T ss_pred cCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEEC-CCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCC---CceE
Confidence 99999777777778999999974 2211 1112222 2334567899999999988888788899999986 4677
Q ss_pred eEEcccCCCCEEEEEEc-cCCCcEEEEEEC
Q psy4510 404 VATFKHHTAPVTTVEWH-PTESSTFASGGA 432 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~ 432 (812)
+..+..+...+++++|. |++..++++...
T Consensus 233 ~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~ 262 (297)
T 3g4e_A 233 LQTVKLPVDKTTSCCFGGKNYSEMYVTCAR 262 (297)
T ss_dssp EEEEECSSSBEEEEEEESGGGCEEEEEEBC
T ss_pred EEEEECCCCCceEEEEeCCCCCEEEEEcCC
Confidence 78887777789999998 776545555543
No 199
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.32 E-value=4.8e-10 Score=119.69 Aligned_cols=239 Identities=12% Similarity=0.016 Sum_probs=164.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC--ceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~ 254 (812)
+....++|+| +++++++...++.|++||..++.. ...... ..... ++|+++++.|++++.++ .|.+++...
T Consensus 131 ~~P~~la~d~-~g~lyv~d~~~~~I~~id~~~g~~----~~~~~~-~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~ 203 (409)
T 3hrp_A 131 KYMWGIAAVG-NNTVLAYQRDDPRVRLISVDDNKV----TTVHPG-FKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKAS 203 (409)
T ss_dssp CCEEEEEECS-TTEEEEEETTTTEEEEEETTTTEE----EEEEET-CCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGG
T ss_pred CCceEEEEeC-CCCEEEEecCCCcEEEEECCCCEE----EEeecc-CCCCc-eeEecCCCcEEEEecCCCceEEEEEcCC
Confidence 5688999999 999888888889999999987542 112222 22233 99999999998888765 688888765
Q ss_pred CCCCCCCCCCceEE----cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE--EEEEEc
Q psy4510 255 GKGPGIPTPPLFSF----SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV--EDLQWS 328 (812)
Q Consensus 255 ~~~~~~~~~~~~~~----~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v--~~~~~~ 328 (812)
+ .....+ ..+...+.+++++|++ +.|+.+..++.|+.|++.++...........++...- ..++|+
T Consensus 204 ~-------~~~~~~g~~~~~~~~~p~~iav~p~~-g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~ 275 (409)
T 3hrp_A 204 G-------WAPTRIGQLGSTFSGKIGAVALDETE-EWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYY 275 (409)
T ss_dssp T-------TCEEEEEECCTTSCSCCCBCEECTTS-SEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEE
T ss_pred C-------ceeEEeeeccchhcCCcEEEEEeCCC-CeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEe
Confidence 3 222233 2244667899999965 4555577788999999987652111000122222222 399999
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcC---------------CCCeEEEEEcCCCCEEEEEe-CCCcEEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAH---------------TSDVNVISWNRTEPLIVSGG-DDGCIHV 392 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~---------------~~~v~~l~~~~~~~~l~sg~-~dg~i~i 392 (812)
|++..++++-..++.|+.|+.... +..+ .++ -.....++++++|+++++-. .++.|+.
T Consensus 276 p~~g~lyv~d~~~~~I~~~~~~g~-----~~~~-~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 276 FVDSNFYMSDQNLSSVYKITPDGE-----CEWF-CGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp TTTTEEEEEETTTTEEEEECTTCC-----EEEE-EECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEE
T ss_pred CCCCEEEEEeCCCCEEEEEecCCC-----EEEE-EeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEE
Confidence 976667888888899999987631 1111 111 23478999999999888877 8899999
Q ss_pred EecCCCCCCCceEEcccC---------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 393 WDLRRFKKGSSVATFKHH---------------TAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~h---------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
|++.. + .+.++.++ -.....|+++|++ .++++-..+++|+.+++
T Consensus 350 ~~~~~---G-~v~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~~g-~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 350 LDILD---G-YVSTVAGQVDVASQIDGTPLEATFNYPYDICYDGEG-GYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp EETTT---T-EEEEEEECTTCBSCCCBSTTTCCBSSEEEEEECSSS-EEEEEESTTCEEEEEEE
T ss_pred EECCC---C-EEEEEeCCCCCCCcCCCChhceEeCCceEEEEcCCC-CEEEEECCCCeEEEEEe
Confidence 99752 2 34444443 2357899999985 67777777888888765
No 200
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.31 E-value=2.5e-10 Score=118.38 Aligned_cols=237 Identities=8% Similarity=-0.104 Sum_probs=156.8
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
.....+++. ++++.++...++.|.+||..+++. ...+. .......++++++++..++...++.|.+||..++
T Consensus 44 ~~~~~i~~~--~~~lyv~~~~~~~v~viD~~t~~~----~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~- 115 (328)
T 3dsm_A 44 DVAQSMVIR--DGIGWIVVNNSHVIFAIDINTFKE----VGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY- 115 (328)
T ss_dssp SCEEEEEEE--TTEEEEEEGGGTEEEEEETTTCCE----EEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT-
T ss_pred ccceEEEEE--CCEEEEEEcCCCEEEEEECcccEE----EEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC-
Confidence 335566663 456666667789999999998873 33332 3467889999999854444447899999999875
Q ss_pred CCCCCCCCceEEcCCC-----CcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 257 GPGIPTPPLFSFSGHL-----TEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~-----~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
+....+.... .....+++ ++ +.|..++ .++.|.++|+.++.. ...+.. ......++++|
T Consensus 116 ------~~~~~i~~g~~~~~~~~p~~i~~--~~-~~lyv~~~~~~~~v~viD~~t~~~----~~~i~~-g~~p~~i~~~~ 181 (328)
T 3dsm_A 116 ------EITGYIECPDMDMESGSTEQMVQ--YG-KYVYVNCWSYQNRILKIDTETDKV----VDELTI-GIQPTSLVMDK 181 (328)
T ss_dssp ------EEEEEEECTTCCTTTCBCCCEEE--ET-TEEEEEECTTCCEEEEEETTTTEE----EEEEEC-SSCBCCCEECT
T ss_pred ------eEEEEEEcCCccccCCCcceEEE--EC-CEEEEEcCCCCCEEEEEECCCCeE----EEEEEc-CCCccceEEcC
Confidence 3333443222 14556777 34 4444444 488999999988752 222221 23457889999
Q ss_pred CCCeEEEEEECC----------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCC
Q psy4510 330 GEKRVLASCSVD----------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFK 399 (812)
Q Consensus 330 ~~~~~l~s~~~d----------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~ 399 (812)
+++ +++++..+ +.|.++|..+.. ....+........+.++|+|++++|+++.. .|.+||....+
T Consensus 182 dG~-l~v~~~~~~~~~~~~~~~~~v~~id~~t~~---v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 182 YNK-MWTITDGGYEGSPYGYEAPSLYRIDAETFT---VEKQFKFKLGDWPSEVQLNGTRDTLYWINN--DIWRMPVEADR 255 (328)
T ss_dssp TSE-EEEEBCCBCTTCSSCBCCCEEEEEETTTTE---EEEEEECCTTCCCEEEEECTTSCEEEEESS--SEEEEETTCSS
T ss_pred CCC-EEEEECCCccCCccccCCceEEEEECCCCe---EEEEEecCCCCCceeEEEecCCCEEEEEcc--EEEEEECCCCc
Confidence 998 56666554 789999987532 222331222346899999999998877655 89999997422
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEE----ECCCCEEEEEcC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASG----GADDQIALWDLA 442 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~----~~dg~v~iwd~~ 442 (812)
.. ....+..+......++++|++..++++. ..++.|.+||..
T Consensus 256 ~~-~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 256 VP-VRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp CC-SSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT
T ss_pred ee-eeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC
Confidence 11 0111122245788999999766777776 668899999987
No 201
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.28 E-value=3e-11 Score=125.58 Aligned_cols=178 Identities=7% Similarity=-0.012 Sum_probs=131.7
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccc------ccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEee
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQ------VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~------~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd 251 (812)
++..+++++ ...++++|+.+ .+++|++....... ........+.. |++|+| ++++|+++ .++.|++||
T Consensus 39 ~~nlLais~-~~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISN-SKSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLD 112 (388)
T ss_dssp CCBCEEEET-TTTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEE
T ss_pred cccEEEEcC-CCCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEE
Confidence 578899999 99999999987 56679865432100 01112234566 999999 89999998 889999999
Q ss_pred CCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 252 KKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
+.+. ........|...+.++.+.+. .+++++.||.|.+||+.++.. .. +...|+|++|+|+|
T Consensus 113 v~sl-------~~~~~~~~~~~~v~~i~~~~p---~~av~~~dG~L~v~dl~~~~~----~~----~~~~Vs~v~WSpkG 174 (388)
T 1xip_A 113 LEEL-------SEFRTVTSFEKPVFQLKNVNN---TLVILNSVNDLSALDLRTKST----KQ----LAQNVTSFDVTNSQ 174 (388)
T ss_dssp SSST-------TCEEEEEECSSCEEEEEECSS---EEEEEETTSEEEEEETTTCCE----EE----EEESEEEEEECSSE
T ss_pred chhh-------hccCccceeecceeeEEecCC---CEEEEECCCCEEEEEccCCcc----cc----ccCCceEEEEcCCc
Confidence 9874 344556677888988888764 388889999999999997762 11 45689999999999
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeecC--------CcCCCCeEEEEEcCCCCEEEE
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTLP--------NAHTSDVNVISWNRTEPLIVS 383 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~~~~v~~l~~~~~~~~l~s 383 (812)
++.|..||++++|+....... ...++. .+|...|.+|+|.+++.++++
T Consensus 175 ---~~vg~~dg~i~~~~~~~~~~~-~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 175 ---LAVLLKDRSFQSFAWRNGEME-KQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp ---EEEEETTSCEEEEEEETTEEE-EEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEE
T ss_pred ---eEEEEcCCcEEEEcCCCcccc-ccceecCCcccccccCCCeeEEEEEEecCCeEEEE
Confidence 577999999999988643210 011221 147788999999998887765
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=6.6e-11 Score=122.93 Aligned_cols=177 Identities=11% Similarity=0.043 Sum_probs=129.5
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC-----CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEE
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK-----GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 299 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~-----~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~v 299 (812)
+++.+++++...++++|+.++ +++|+++... ... ...+.... .+.+ |+.|+| ++ ..|+++ .++.|++
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~-~~~~~~~~-~lp~-V~~l~f--d~-~~L~v~-~~~~l~v 110 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSDST-PLTFKWEK-EIPD-VIFVCF--HG-DQVLVS-TRNALYS 110 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSSSC-CCCCSEEE-ECTT-EEEEEE--ET-TEEEEE-ESSEEEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccccc-cccceEEe-eCCC-eeEEEE--CC-CEEEEE-cCCcEEE
Confidence 689999999999999998875 5559865421 000 02333333 3666 999999 66 788888 7899999
Q ss_pred EeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC
Q psy4510 300 WTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP 379 (812)
Q Consensus 300 wd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~ 379 (812)
||+.+... ......|...+.++.+.+. + +++++.||.|.+||+..... . . +...|+|++|+|+|
T Consensus 111 ~dv~sl~~----~~~~~~~~~~v~~i~~~~p--~-~av~~~dG~L~v~dl~~~~~---~-~----~~~~Vs~v~WSpkG- 174 (388)
T 1xip_A 111 LDLEELSE----FRTVTSFEKPVFQLKNVNN--T-LVILNSVNDLSALDLRTKST---K-Q----LAQNVTSFDVTNSQ- 174 (388)
T ss_dssp EESSSTTC----EEEEEECSSCEEEEEECSS--E-EEEEETTSEEEEEETTTCCE---E-E----EEESEEEEEECSSE-
T ss_pred EEchhhhc----cCccceeecceeeEEecCC--C-EEEEECCCCEEEEEccCCcc---c-c----ccCCceEEEEcCCc-
Confidence 99987762 3344556778888888765 2 88899999999999984332 1 1 34689999999999
Q ss_pred EEEEEeCCCcEEEEecCCCCCCCc--eEEc------c---cCCCCEEEEEEccCCCcEEEEE
Q psy4510 380 LIVSGGDDGCIHVWDLRRFKKGSS--VATF------K---HHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 380 ~l~sg~~dg~i~iwd~~~~~~~~~--~~~~------~---~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
++.|..||.+++|+... ... ..++ . +|...|.+|.|.+++ .++++-
T Consensus 175 -~~vg~~dg~i~~~~~~~---~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~-~flv~y 231 (388)
T 1xip_A 175 -LAVLLKDRSFQSFAWRN---GEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQ-DFLAVF 231 (388)
T ss_dssp -EEEEETTSCEEEEEEET---TEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSS-EEEEEE
T ss_pred -eEEEEcCCcEEEEcCCC---ccccccceecCCcccccccCCCeeEEEEEEecCC-eEEEEE
Confidence 78899999999998863 221 3344 2 378899999999975 455543
No 203
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.26 E-value=1.1e-09 Score=113.54 Aligned_cols=252 Identities=12% Similarity=0.030 Sum_probs=161.7
Q ss_pred CCCcEEEEccCCCCccccccccc--CCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc
Q psy4510 197 CKRNIHIWTPREAGAWQVDQKPL--GGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE 274 (812)
Q Consensus 197 ~dg~v~iwd~~~~~~~~~~~~~l--~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~ 274 (812)
.++.|.+||..+++......... .........+++. .++..++...++.|.+||..++ +.+.++. ....
T Consensus 15 ~~~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~-------~~~~~i~-~~~~ 85 (328)
T 3dsm_A 15 SNATLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTF-------KEVGRIT-GFTS 85 (328)
T ss_dssp CCBEEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTC-------CEEEEEE-CCSS
T ss_pred CCceEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECccc-------EEEEEcC-CCCC
Confidence 47899999998876321111100 1122345677774 4555566667899999999885 5666664 3467
Q ss_pred EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEE-CCCeEEEEE
Q psy4510 275 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCS-VDLSIRIWD 348 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd 348 (812)
...+++++++ .++++...++.|.+||+.+... ...+.. .......+++ ++..++++.. .++.|.++|
T Consensus 86 p~~i~~~~~g-~lyv~~~~~~~v~~iD~~t~~~----~~~i~~g~~~~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD 158 (328)
T 3dsm_A 86 PRYIHFLSDE-KAYVTQIWDYRIFIINPKTYEI----TGYIECPDMDMESGSTEQMVQ--YGKYVYVNCWSYQNRILKID 158 (328)
T ss_dssp EEEEEEEETT-EEEEEEBSCSEEEEEETTTTEE----EEEEECTTCCTTTCBCCCEEE--ETTEEEEEECTTCCEEEEEE
T ss_pred CcEEEEeCCC-eEEEEECCCCeEEEEECCCCeE----EEEEEcCCccccCCCcceEEE--ECCEEEEEcCCCCCEEEEEE
Confidence 8899999987 5555554789999999987752 222211 1124566777 4554566654 489999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC----------CcEEEEecCCCCCCCceEEcccC-CCCEEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD----------GCIHVWDLRRFKKGSSVATFKHH-TAPVTTV 417 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d----------g~i~iwd~~~~~~~~~~~~~~~h-~~~v~~v 417 (812)
+.+.. .+..+.. ......++++|+|++++++..+ +.|.++|..+ .+....+... ......+
T Consensus 159 ~~t~~---~~~~i~~--g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t---~~v~~~~~~~~g~~p~~l 230 (328)
T 3dsm_A 159 TETDK---VVDELTI--GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET---FTVEKQFKFKLGDWPSEV 230 (328)
T ss_dssp TTTTE---EEEEEEC--SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT---TEEEEEEECCTTCCCEEE
T ss_pred CCCCe---EEEEEEc--CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC---CeEEEEEecCCCCCceeE
Confidence 98543 2333311 2345678999999877766554 7899999873 4444454422 2367899
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEE
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~ 489 (812)
+|+|++. .|.++.. .|.+||..+.+.. ...+...+......++++|+...++++.
T Consensus 231 a~~~d~~-~lyv~~~--~v~~~d~~t~~~~--------------~~~~~~~~~~~p~gi~vdp~~g~lyva~ 285 (328)
T 3dsm_A 231 QLNGTRD-TLYWINN--DIWRMPVEADRVP--------------VRPFLEFRDTKYYGLTVNPNNGEVYVAD 285 (328)
T ss_dssp EECTTSC-EEEEESS--SEEEEETTCSSCC--------------SSCSBCCCSSCEEEEEECTTTCCEEEEE
T ss_pred EEecCCC-EEEEEcc--EEEEEECCCCcee--------------eeeeecCCCCceEEEEEcCCCCeEEEEc
Confidence 9999875 5555543 8999999876421 0001111134678899999776777776
No 204
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.26 E-value=3.2e-09 Score=109.35 Aligned_cols=164 Identities=7% Similarity=0.051 Sum_probs=101.7
Q ss_pred cCCCCcEEEEEecCCCCCEEEE-------EeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-CCeEEEEEEC
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLAT-------GDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG-EKRVLASCSV 340 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~s-------g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~-~~~~l~s~~~ 340 (812)
...-....+++|++++ .++++ +..++.|.+|+..++...........++...+.+++++++ +. ++++ +.
T Consensus 14 ~~~~~~~~~~~~~~~g-~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~-l~v~-~~ 90 (314)
T 1pjx_A 14 TEDIPGAEGPVFDKNG-DFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQ-LFVA-DM 90 (314)
T ss_dssp ECCCTTCEEEEECTTS-CEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSE-EEEE-ET
T ss_pred hccCCCccCceECCCC-CEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCc-EEEE-EC
Confidence 3344556799999887 67776 5667899999987765211111001124467899999999 65 4444 44
Q ss_pred CCeEEEEECCCCCcccce-eecC-CcCCCCeEEEEEcCCCCEEEEEeCC---------------CcEEEEecCCCCCCCc
Q psy4510 341 DLSIRIWDTRVINTKSCM-LTLP-NAHTSDVNVISWNRTEPLIVSGGDD---------------GCIHVWDLRRFKKGSS 403 (812)
Q Consensus 341 dg~i~iwd~~~~~~~~~~-~~~~-~~~~~~v~~l~~~~~~~~l~sg~~d---------------g~i~iwd~~~~~~~~~ 403 (812)
.+.|.+||.. +.. ..+ .... ......+++++++++|+++++...+ +.|..||.. ++
T Consensus 91 ~~~l~~~d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~----g~- 163 (314)
T 1pjx_A 91 RLGLLVVQTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD----GQ- 163 (314)
T ss_dssp TTEEEEEETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT----SC-
T ss_pred CCCEEEEeCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC----CC-
Confidence 4579999986 322 111 1110 1123458899999999877776654 456666653 22
Q ss_pred eEEcccCCCCEEEEEEc----cCCCcEEEEEECCCCEEEEEcC
Q psy4510 404 VATFKHHTAPVTTVEWH----PTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~----p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
+..+..+......++|+ |++..++++...++.|.+||+.
T Consensus 164 ~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~ 206 (314)
T 1pjx_A 164 MIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIK 206 (314)
T ss_dssp EEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEE
T ss_pred EEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECC
Confidence 22232334456888999 8864344554567788888864
No 205
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.24 E-value=2e-09 Score=111.39 Aligned_cols=226 Identities=9% Similarity=0.001 Sum_probs=148.3
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP 258 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~ 258 (812)
....+|+|..+.++++...++.|.+|+..++... .+ .+...+.+++|+++++++++. . ..|.+|+..++
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-----~~-~~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g--- 119 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKT-----VH-ALPFMGSALAKISDSKQLIAS-D-DGLFLRDTATG--- 119 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-----EE-ECSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTC---
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-----EE-ECCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCC---
Confidence 4568899944667778878899999998775421 11 124579999999999877765 3 34889998764
Q ss_pred CCCCCCceEEcC----C-CCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEE
Q psy4510 259 GIPTPPLFSFSG----H-LTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 327 (812)
Q Consensus 259 ~~~~~~~~~~~~----h-~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~ 327 (812)
+ +..+.. . ...+..++++|+| .++++... .+.|..++ ++. ...+..+....+.++|
T Consensus 120 ----~-~~~~~~~~~~~~~~~~~~i~~d~~G-~l~v~~~~~~~~~~~~~l~~~~--~g~-----~~~~~~~~~~~~~i~~ 186 (326)
T 2ghs_A 120 ----V-LTLHAELESDLPGNRSNDGRMHPSG-ALWIGTMGRKAETGAGSIYHVA--KGK-----VTKLFADISIPNSICF 186 (326)
T ss_dssp ----C-EEEEECSSTTCTTEEEEEEEECTTS-CEEEEEEETTCCTTCEEEEEEE--TTE-----EEEEEEEESSEEEEEE
T ss_pred ----c-EEEEeeCCCCCCCCCCCCEEECCCC-CEEEEeCCCcCCCCceEEEEEe--CCc-----EEEeeCCCcccCCeEE
Confidence 2 222221 1 2358899999998 55554432 23455555 332 1122223345789999
Q ss_pred cCCCCeEEEEEECCCeEEEEECC--CC-Ccc--cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCC
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR--VI-NTK--SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGS 402 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~--~~-~~~--~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~ 402 (812)
+|+++.++++.+.++.|.+||+. ++ ... ..+..+ .........+++.++|+++++...++.|.+||.. ++
T Consensus 187 s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~-~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~~----g~ 261 (326)
T 2ghs_A 187 SPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDS-TGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDTD----GN 261 (326)
T ss_dssp CTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEEC-TTSSSEEEEEEECTTSCEEEEEETTTEEEEECTT----CC
T ss_pred cCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEEC-CCCCCCCCeeEECCCCCEEEEEeCCCEEEEECCC----CC
Confidence 99998666666678899999985 32 111 112222 2234557889999999877777677889999983 45
Q ss_pred ceEEcccCCCCEEEEEEc-cCCCcEEEEEECC
Q psy4510 403 SVATFKHHTAPVTTVEWH-PTESSTFASGGAD 433 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~-p~~~~~l~s~~~d 433 (812)
.+..+..+...+++++|. |++..++++...+
T Consensus 262 ~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~ 293 (326)
T 2ghs_A 262 HIARYEVPGKQTTCPAFIGPDASRLLVTSARE 293 (326)
T ss_dssp EEEEEECSCSBEEEEEEESTTSCEEEEEEBCT
T ss_pred EEEEEECCCCCcEEEEEecCCCCEEEEEecCC
Confidence 666676667779999998 7765444444443
No 206
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.24 E-value=6.1e-10 Score=129.47 Aligned_cols=275 Identities=9% Similarity=-0.060 Sum_probs=159.8
Q ss_pred CCCCCCeEEEecCCC---cEEEEccCC----CCcccccc---cccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEE
Q psy4510 185 SSTEPGVLATGDCKR---NIHIWTPRE----AGAWQVDQ---KPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAE 249 (812)
Q Consensus 185 sp~~~~~lat~~~dg---~v~iwd~~~----~~~~~~~~---~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~v 249 (812)
+| +|++++....++ .-.||.... +....... ....+|...+..++|||||++|+.++.+ ..|++
T Consensus 115 ~p-dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v 193 (741)
T 1yr2_A 115 QR-RGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDGGSDWRTVKF 193 (741)
T ss_dssp EE-ETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEETTCSEEEEEE
T ss_pred EE-ECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEE
Confidence 37 888877554333 255665442 22111110 1223455578899999999999887643 45999
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCc--------------EEEEeCCCCCcceeccccc
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRN--------------IHIWTPREAGAWQVDQKPL 315 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~--------------i~vwd~~~~~~~~~~~~~~ 315 (812)
||+.++ +.+. ...+...+..++|+|+ . .|+.++.++. |++|++.++..........
T Consensus 194 ~dl~tg-------~~~~-~~~~~~~~~~~~wspD-~-~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~ 263 (741)
T 1yr2_A 194 VGVADG-------KPLA-DELKWVKFSGLAWLGN-D-ALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFAT 263 (741)
T ss_dssp EETTTC-------CEEE-EEEEEEESCCCEESTT-S-EEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECC
T ss_pred EECCCC-------CCCC-ccCCCceeccEEEECC-C-EEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEecc
Confidence 999986 2222 2112222357899999 4 4555444443 8999987664211122222
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEEC----CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC----C
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSV----DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD----D 387 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~----dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~----d 387 (812)
..+...+..+.|+|+|+.+++++.. ...|++||+.++.. .+...+ ..+...+.... +|+|..|+..+. +
T Consensus 264 ~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~-~~~~~l-~~~~~~~~~~~-~~dg~~l~~~s~~~~~~ 340 (741)
T 1yr2_A 264 PELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKI-GPVTAL-IPDLKAQWDFV-DGVGDQLWFVSGDGAPL 340 (741)
T ss_dssp TTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEE-CCCEEE-ECSSSSCEEEE-EEETTEEEEEECTTCTT
T ss_pred CCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCC-cccEEe-cCCCCceEEEE-eccCCEEEEEECCCCCC
Confidence 3344468899999999964444432 34899999875311 112333 22333444443 488887777665 3
Q ss_pred CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee
Q psy4510 388 GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH 467 (812)
Q Consensus 388 g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 467 (812)
+.|.+||+.... ......+..+...+..+.|. +..++++...|+..++|.+..... ......
T Consensus 341 ~~l~~~d~~~~~-~~~~~l~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l~~~~~~g~---------------~~~~l~ 402 (741)
T 1yr2_A 341 KKIVRVDLSGST-PRFDTVVPESKDNLESVGIA--GNRLFASYIHDAKSQVLAFDLDGK---------------PAGAVS 402 (741)
T ss_dssp CEEEEEECSSSS-CEEEEEECCCSSEEEEEEEE--BTEEEEEEEETTEEEEEEEETTSC---------------EEEECB
T ss_pred CEEEEEeCCCCc-cccEEEecCCCCeEEEEEEE--CCEEEEEEEECCEEEEEEEeCCCC---------------ceeecc
Confidence 459999987421 22233344455556678887 346888888899887776642210 111111
Q ss_pred c-CCCceeEEEEcCCCCCEEEEEeC
Q psy4510 468 L-GQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 468 ~-~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
. ....+..+.++|+++.++++.++
T Consensus 403 ~~~~~~v~~~~~s~d~~~l~~~~ss 427 (741)
T 1yr2_A 403 LPGIGSASGLSGRPGDRHAYLSFSS 427 (741)
T ss_dssp CSSSCEEEEEECCBTCSCEEEEEEE
T ss_pred CCCCeEEEEeecCCCCCEEEEEEcC
Confidence 1 23467888999988767666554
No 207
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.22 E-value=7e-10 Score=127.66 Aligned_cols=247 Identities=11% Similarity=0.056 Sum_probs=159.6
Q ss_pred CCCCceEEEEeCCCCCCeEEE-----ecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC---
Q psy4510 174 GHLTEGFAMDWSSTEPGVLAT-----GDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--- 245 (812)
Q Consensus 174 gh~~~i~~~~~sp~~~~~lat-----~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--- 245 (812)
+|...+..++||| +|++||- |+....|+|||+.+++.... .+ +......++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~Sp-Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~---~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~ 198 (693)
T 3iuj_A 126 DGTTALDQLSFSR-DGRILAYSLSLAGSDWREIHLMDVESKQPLET---PL--KDVKFSGISWL-GNEGFFYSSYDKPDG 198 (693)
T ss_dssp TSCCEEEEEEECT-TSSEEEEEEECSSCCEEEEEEEETTTCSEEEE---EE--EEEESCCCEEE-TTTEEEEEESSCCC-
T ss_pred CCcEEEEEEEECC-CCCEEEEEEecCCCceEEEEEEECCCCCCCcc---cc--CCceeccEEEe-CCCEEEEEEecCccc
Confidence 4556788999999 9999983 44446899999998863211 11 11123678999 999999888764
Q ss_pred ----------ceEEeeCCCCCCCCCCCC--CceEEcC-CCCcEEEEEecCCCCCEEEEEeC---CCcEEEEeCCCCCcce
Q psy4510 246 ----------QLAEHNKKRGKGPGIPTP--PLFSFSG-HLTEGFAMDWSSTEPGVLATGDC---KRNIHIWTPREAGAWQ 309 (812)
Q Consensus 246 ----------~i~vwd~~~~~~~~~~~~--~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~---dg~i~vwd~~~~~~~~ 309 (812)
.|++|++.++ ... .+..... |...+.++.|+|++..++++.+. ...|+++++.++..
T Consensus 199 ~~~~~~~~~~~v~~~~lgt~-----~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~-- 271 (693)
T 3iuj_A 199 SELSARTDQHKVYFHRLGTA-----QEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA-- 271 (693)
T ss_dssp ------CCCCEEEEEETTSC-----GGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--
T ss_pred ccccccCCCcEEEEEECCCC-----cccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--
Confidence 3888998774 112 2222233 44567899999999544555543 35899999987642
Q ss_pred eccccccCCCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 310 VDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 310 ~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
....+..+....... |++++..+++....+ +.|..+|+...... ....+ ..|...+. .|+++++.|+....
T Consensus 272 -~~~~l~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~-~~~~l-~~~~~~~~--~~s~~g~~lv~~~~ 345 (693)
T 3iuj_A 272 -PLLTVQGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA-HWRDL-IPERQQVL--TVHSGSGYLFAEYM 345 (693)
T ss_dssp -CCEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG-GCEEE-ECCCSSCE--EEEEETTEEEEEEE
T ss_pred -ceEEEeCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc-ccEEE-ecCCCCEE--EEEEECCEEEEEEE
Confidence 133444555555554 677777666666554 68999999854321 12233 33444454 88888886665554
Q ss_pred -CC--cEEEEecCCCCCCCceEEcc-cCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcCCC
Q psy4510 387 -DG--CIHVWDLRRFKKGSSVATFK-HHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLAVE 444 (812)
Q Consensus 387 -dg--~i~iwd~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~~~ 444 (812)
+| .|++||+. +.....+. ...+.+..+.++|++..++++.+. -++|..||+.+.
T Consensus 346 ~~g~~~l~~~d~~----g~~~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss~~tP~~l~~~d~~~g 406 (693)
T 3iuj_A 346 VDATARVEQFDYE----GKRVREVALPGLGSVSGFNGKHDDPALYFGFENYAQPPTLYRFEPKSG 406 (693)
T ss_dssp ETTEEEEEEECTT----SCEEEEECCSSSSEEEECCCCTTCSCEEEEEECSSSCCEEEEECTTTC
T ss_pred ECCeeEEEEEECC----CCeeEEeecCCCceEEeeecCCCCCEEEEEecCCCCCCEEEEEECCCC
Confidence 44 68888885 33344443 234567788888887666665543 267889998765
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.21 E-value=2.9e-08 Score=101.31 Aligned_cols=271 Identities=9% Similarity=-0.010 Sum_probs=174.1
Q ss_pred CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEE
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIW 300 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vw 300 (812)
.....+.++++.++++..++...++.|.+|+.. +. .. ...+..+...+.++++.+++ .++++...++.|..+
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~-----~~-~~~~~~~~~~~~~i~~~~~g-~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GR-----IK-EFEVPTPDAKVMCLIVSSLG-DIWFTENGANKIGKL 88 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-----EE-EEECSSTTCCEEEEEECTTS-CEEEEETTTTEEEEE
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-Cc-----eE-EEECCCCCCcceeEEECCCC-CEEEEecCCCeEEEE
Confidence 345678899999999987777778999999977 31 11 12223344678999999988 677766667889999
Q ss_pred eCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCE
Q psy4510 301 TPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPL 380 (812)
Q Consensus 301 d~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~ 380 (812)
|.. +.. ...........+.++++.+++. ++++...++.|..+|.. +.. . ...+ ......+..+++.+++++
T Consensus 89 d~~-g~~---~~~~~~~~~~~~~~i~~~~~g~-l~v~~~~~~~i~~~~~~-g~~-~-~~~~-~~~~~~~~~i~~d~~g~l 159 (300)
T 2qc5_A 89 SKK-GGF---TEYPLPQPDSGPYGITEGLNGD-IWFTQLNGDRIGKLTAD-GTI-Y-EYDL-PNKGSYPAFITLGSDNAL 159 (300)
T ss_dssp CTT-SCE---EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECTT-SCE-E-EEEC-SSTTCCEEEEEECTTSSE
T ss_pred CCC-CCe---EEecCCCCCCCCccceECCCCC-EEEEccCCCeEEEECCC-CCE-E-EccC-CCCCCCceeEEECCCCCE
Confidence 987 432 1122222346789999999887 67766668899999976 221 1 1222 224567899999999997
Q ss_pred EEEEeCCCcEEEEecCCCCCCCce-EEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccC
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSV-ATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDL 459 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~-~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 459 (812)
+++...++.|..+|.. +... .....+...+.++++.+++ .++++....+.|.+||.. ...
T Consensus 160 ~v~~~~~~~i~~~~~~----g~~~~~~~~~~~~~~~~i~~d~~g-~l~v~~~~~~~i~~~~~~-g~~------------- 220 (300)
T 2qc5_A 160 WFTENQNNSIGRITNT----GKLEEYPLPTNAAAPVGITSGNDG-ALWFVEIMGNKIGRITTT-GEI------------- 220 (300)
T ss_dssp EEEETTTTEEEEECTT----CCEEEEECSSTTCCEEEEEECTTS-SEEEEETTTTEEEEECTT-CCE-------------
T ss_pred EEEecCCCeEEEECCC----CcEEEeeCCCCCCCcceEEECCCC-CEEEEccCCCEEEEEcCC-CcE-------------
Confidence 7777667889999983 2222 2223345678999999986 566665556789999973 211
Q ss_pred CCceEEeecCCCceeEEEEcCCCCCEEEEEeC-CCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEee
Q psy4510 460 PSQLLFIHLGQKEIKELHWHPQLPGTIISTAN-SGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 534 (812)
Q Consensus 460 ~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~ 534 (812)
...........+..+++++++. +.++... +++..|.. . ..............+.++++.++ +.+..+.
T Consensus 221 --~~~~~~~~~~~~~~i~~d~~g~-l~v~~~~~~~i~~~~~-~-g~~~~~~~~~~~~~~~~i~~~~~--g~l~v~~ 289 (300)
T 2qc5_A 221 --SEYDIPTPNARPHAITAGKNSE-IWFTEWGANQIGRITN-D-NTIQEYQLQTENAEPHGITFGKD--GSVWFAL 289 (300)
T ss_dssp --EEEECSSTTCCEEEEEECSTTC-EEEEETTTTEEEEECT-T-SCEEEEECCSTTCCCCCEEECTT--SCEEEEC
T ss_pred --EEEECCCCCCCceEEEECCCCC-EEEeccCCCeEEEECC-C-CcEEEEECCccCCccceeEeCCC--CCEEEEc
Confidence 1111112234688999999864 5555543 45556554 2 22221212223456788888888 4444443
No 209
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.21 E-value=2e-06 Score=100.80 Aligned_cols=482 Identities=9% Similarity=0.076 Sum_probs=260.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+.|+++.-.+ +|. |-.|+.+| +..||-..-+...... ..-.-....|.+|...++|...+ ++. +.+..||..+.
T Consensus 43 n~v~~I~qD~-~G~-lWigT~~G-L~ryDG~~f~~~~~~~~~~~~l~~n~I~~i~~d~~g~lWi-gT~-~Gl~~yd~~~~ 117 (795)
T 4a2l_A 43 STVFSIDQDK-RGN-MWFATYDG-VNKYDGYAFTVYQHNEDDPNSIANDISRIVKTDSQGRVWI-GTR-DGLSRYDEEKD 117 (795)
T ss_dssp SCEEEEEECT-TSC-EEEEETTE-EEEECSSCEEEECCCTTCTTSCSCSCEEEEEECTTSCEEE-EES-SCEEEEETTTT
T ss_pred ceeEEEEEcC-CCC-EEEeecCc-CcccCCCceEEEeCCCCCCCcccccceeEEEECCCCCEEE-EeC-CchheeCCCCC
Confidence 6799998777 554 44555566 5666643211000000 00011245799999988887555 444 44788987653
Q ss_pred CCCCCCCCCceEEcCCCC----cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC-CCC-EEEEEEcC
Q psy4510 256 KGPGIPTPPLFSFSGHLT----EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNS-VEDLQWSP 329 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~----~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~-v~~~~~~p 329 (812)
....+..... .|.++...+++ .|..++. +.|..|+..+... .....++ ... |.++...+
T Consensus 118 --------~f~~~~~~~~~~~~~i~~i~~d~~g--~lwi~t~-~gl~~~~~~~~~~----~~~~~~~~~~~~i~~i~~d~ 182 (795)
T 4a2l_A 118 --------IFQNFFYEKNGKHLQVNGIEEISPE--QLLISTP-EGLIMFDIKESKF----IDDSFSTAMHKTIASTLYRQ 182 (795)
T ss_dssp --------EEEEECCEETTEECCCCEEEEEETT--EEEEEET-TEEEEEETTTTEE----ECSSSCHHHHTCCEEEEEEE
T ss_pred --------eEEeccccccCCCceEEEEEECCCC--CEEEEEC-CceEEEECCCCEE----EeccCCCCCCcceEEEEECC
Confidence 2222322111 17788887776 3444444 5588999766431 1100111 113 88888888
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
++. |..++.++.|..|+..... ...+ .......|.++...+++.+. .|+.++-|.+||... ..+..+.
T Consensus 183 ~g~--lwigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~i~~i~~d~~g~lw-igt~~~Gl~~~~~~~----~~~~~~~ 251 (795)
T 4a2l_A 183 GDQ--IYIGTSTDGLYTYSITQKT----FEKVIPILGTKQIQAILQQSPTRIW-VATEGAGLFLINPKT----KEIKNYL 251 (795)
T ss_dssp TTE--EEEEESSSCEEEEETTTCC----EEECC----CCCEEEEEEEETTEEE-EEEBSSCEEEEETTT----TEEEEEC
T ss_pred CCC--EEEEECCCCEEEEeCCCCe----EEEecCCCCCCeeEEEEEcCCCCEE-EEECCCCeEEEeCCC----CeEEEee
Confidence 775 4446665568889976432 1111 12235678888888777644 455444488999753 2222222
Q ss_pred c--------CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee--------cCCCc
Q psy4510 409 H--------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH--------LGQKE 472 (812)
Q Consensus 409 ~--------h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~ 472 (812)
. ....|.++...+++. |..|+.+ -|.+||..... ..... .....
T Consensus 252 ~~~~~~~~l~~~~i~~i~~d~~g~--lWigt~~-Gl~~~~~~~~~-----------------~~~~~~~~~~~~~l~~~~ 311 (795)
T 4a2l_A 252 HSPSNPKSISSNYIRSLAMDSQNR--LWIGTFN-DLNIYHEGTDS-----------------FASYSSNPVENGSLSQRS 311 (795)
T ss_dssp CCTTCTTSCSCSBEEEEEECTTSC--EEEEESS-CEEEEETTTTE-----------------EEEECCCTTSTTSCSSSC
T ss_pred cCCCCccccCCCeEEEEEEcCCCC--EEEEeCC-hhheEcCCCCe-----------------EEEEecCCCCCCCCCCCc
Confidence 1 135699999888763 5555555 58999976552 11111 11246
Q ss_pred eeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe-----ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecc
Q psy4510 473 IKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFI-----HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMS 547 (812)
Q Consensus 473 v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~ 547 (812)
|.++...+++ .+.+++..+|+..+........ .... ......|.++...+++ .+.+++...+...+. ..
T Consensus 312 i~~i~~D~~g-~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~l~~~~V~~i~~d~~g-~lWiGt~~~Gl~~~~---~~ 385 (795)
T 4a2l_A 312 VRSIFMDSQG-GMWLGTYFGGLNYYHPIRNRFK-NIRNIPYKNSLSDNVVSCIVEDKDK-NLWIGTNDGGLNLYN---PI 385 (795)
T ss_dssp EEEEEECTTS-CEEEEESSSCEEEECGGGGSSE-EECCCTTSSSCSCSSEEEEEECTTS-CEEEEESSSCEEEEC---TT
T ss_pred EEEEEEeCCc-CEEEEECCCCeEEeCCCcccce-EEcCCCCCCCCCCCeeEEEEECCCC-CEEEEECCCCeEEEc---CC
Confidence 8899888886 4666666678877754322111 1100 0123468888887763 344554444433221 10
Q ss_pred cCcccccccccccccccCCCCCCccccCCCccceEE-ecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccC
Q psy4510 548 NLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYF-IRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVD 626 (812)
Q Consensus 548 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~ 626 (812)
. .. ...... .. .... .-....|.+++..++|..|.+| +.++.|.+|+..++....
T Consensus 386 ~---~~----~~~~~~------------~~--~~~~~~l~~~~v~~i~~d~~g~~lWig--t~~~Gl~~~d~~~~~~~~- 441 (795)
T 4a2l_A 386 T---QR----FTSYTL------------QE--DESARGIGSNNIKAVYVDEKKSLVYIG--THAGGLSILHRNSGQVEN- 441 (795)
T ss_dssp T---CC----EEEECC------------C--------CCSCSCEEEEEEETTTTEEEEE--ETTTEEEEEETTTCCEEE-
T ss_pred C---Cc----EEEEec------------CC--CCcccCCCCccEEEEEEcCCCCEEEEE--eCcCceeEEeCCCCcEEE-
Confidence 0 00 000000 00 0000 0113468888888888745555 456779999987654110
Q ss_pred CcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------
Q psy4510 627 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--------------- 691 (812)
Q Consensus 627 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~--------------- 691 (812)
.... .. ..+...|.++...+ ++.+.+... . -|.+|+..+++.
T Consensus 442 -------~~~~---------~~----~l~~~~v~~i~~d~-~g~lwigt~-~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~ 498 (795)
T 4a2l_A 442 -------FNQR---------NS----QLVNENVYAILPDG-EGNLWLGTL-S-ALVRFNPEQRSFTTIEKEKDGTPVVSK 498 (795)
T ss_dssp -------ECTT---------TS----CCSCSCEEEEEECS-SSCEEEEES-S-CEEEEETTTTEEEECCBCTTCCBCCCC
T ss_pred -------eecC---------CC----CcCCCeeEEEEECC-CCCEEEEec-C-ceeEEeCCCCeEEEccccccccccCCc
Confidence 0000 00 01345789999888 666555443 3 477788765322
Q ss_pred -eEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccc---ccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecC
Q psy4510 692 -WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQ---KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRD 767 (812)
Q Consensus 692 -~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~---~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~ 767 (812)
+..++..++|++.+... +.|..|+..++.. . .. ..-..+...|.+|...++|. +.++.. . -|..||.+.
T Consensus 499 ~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~-~-~~~~~~~~~l~~~~i~~i~~d~~g~-lWigT~-~-Gl~~~d~~~ 571 (795)
T 4a2l_A 499 QITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI-Q-KASILPVSNVTKLFTNCIYEASNGI-IWVGTR-E-GFYCFNEKD 571 (795)
T ss_dssp CEEEEEECTTCCEEEEES--SCEEEEEEETTEE-E-ECCCSCSCGGGGSCEEEEEECTTSC-EEEEES-S-CEEEEETTT
T ss_pred eEEEEEECCCCCEEEEeC--CceEEEeCCCCeE-E-EecCCCCCCCCCCeeEEEEECCCCC-EEEEeC-C-CceeECCCC
Confidence 23344566776555443 5588888766531 1 10 00012345799999999998 555444 2 566777654
Q ss_pred cc
Q psy4510 768 ML 769 (812)
Q Consensus 768 ~~ 769 (812)
..
T Consensus 572 ~~ 573 (795)
T 4a2l_A 572 KQ 573 (795)
T ss_dssp TE
T ss_pred Cc
Confidence 43
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.21 E-value=2.2e-08 Score=105.12 Aligned_cols=274 Identities=7% Similarity=-0.043 Sum_probs=164.7
Q ss_pred eCCCCCCeEEEecC--CC---cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceE
Q psy4510 184 WSSTEPGVLATGDC--KR---NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLA 248 (812)
Q Consensus 184 ~sp~~~~~lat~~~--dg---~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~ 248 (812)
..| +++++.++.. .+ +|.+||..+++. ...+..-..+ .++++||+++|+.+. .++.|.
T Consensus 28 ~~~-~~~~~yv~~~~~~~~~~~v~v~D~~t~~~----~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~ 100 (373)
T 2mad_H 28 PGA-DGRRSYINLPAHHSAIIQQWVLDAGSGSI----LGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVE 100 (373)
T ss_pred CCC-CCCEEEEeCCcccCCccEEEEEECCCCeE----EEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEE
Confidence 345 6776666542 22 889999988763 3334433334 999999999998886 367899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceecccc-ccCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKP-LVGH 318 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~-~~~h 318 (812)
++|..+. +.+.++.-. ......++|+|++ ++|+++.. ++.|.++| .+++ .... +. .
T Consensus 101 viD~~t~-------~~~~~i~~~~~~~~~~g~~p~~~~~spDG-~~l~v~n~~~~~~v~viD-~t~~----~~~~~i~-~ 166 (373)
T 2mad_H 101 VFDPVTF-------LPIADIELPDAPRFDVGPYSWMNANTPNN-ADLLFFQFAAGPAVGLVV-QGGS----SDDQLLS-S 166 (373)
T ss_pred EEECCCC-------cEEEEEECCCccccccCCCccceEECCCC-CEEEEEecCCCCeEEEEE-CCCC----EEeEEcC-C
Confidence 9999874 444433211 1234589999999 66666653 57899999 7775 2222 22 1
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee--ecCCcCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML--TLPNAHTSD-VNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.. ++.+.|.++..+++.+.||.+.++|. ++....... ... ....+ .....+.+++..++..+..+.+.+.|+
T Consensus 167 ~~---~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~-~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~ 241 (373)
T 2mad_H 167 PT---CYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAML-TAAQNLLTQPAQANKSGRIVWPVYSGKILQADI 241 (373)
T ss_pred Cc---eEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccc-cCCcceeecceeEecCCEEEEEcCCceEEEEec
Confidence 11 25566777667888889999999999 543321111 010 11112 233456666654444446789999998
Q ss_pred CCCCCCCceEEccc----------CCCCEEEEEEccCCCcEEEEEE---------CCCCEEEEEcCCCCchhHHHhhhhh
Q psy4510 396 RRFKKGSSVATFKH----------HTAPVTTVEWHPTESSTFASGG---------ADDQIALWDLAVERDSEIEQREAEL 456 (812)
Q Consensus 396 ~~~~~~~~~~~~~~----------h~~~v~~v~~~p~~~~~l~s~~---------~dg~v~iwd~~~~~~~~~~~~~~~~ 456 (812)
.... ...+..+.. .......+.++|++.+++++.. ..+.|.++|+.+.+
T Consensus 242 ~~~~-~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~----------- 309 (373)
T 2mad_H 242 SAAG-ATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQ----------- 309 (373)
T ss_pred cCCc-ceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCE-----------
Confidence 6311 111222211 1123444788998764444433 13579999998873
Q ss_pred ccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe--CCCeEEEEeCC
Q psy4510 457 KDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA--NSGFNIFRTIS 501 (812)
Q Consensus 457 ~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~--~~~~~~~~~~~ 501 (812)
.............+.|+|++..+++++. .+.+.+++..+
T Consensus 310 ------vv~~i~~g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 310 ------TSSQISLGHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ------EEEEEECCCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 3222222336889999999874454443 45566666544
No 211
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=99.18 E-value=2e-06 Score=100.79 Aligned_cols=489 Identities=9% Similarity=0.050 Sum_probs=261.5
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|.++...+ +|.+.+ |+.+| +..||..+..-........ .....|.++...+++...+.. . +.+.+|+..++
T Consensus 87 ~n~I~~i~~d~-~g~lWi-gT~~G-l~~yd~~~~~f~~~~~~~~-~~~~~i~~i~~d~~g~lwi~t-~-~gl~~~~~~~~ 160 (795)
T 4a2l_A 87 NDISRIVKTDS-QGRVWI-GTRDG-LSRYDEEKDIFQNFFYEKN-GKHLQVNGIEEISPEQLLIST-P-EGLIMFDIKES 160 (795)
T ss_dssp CSCEEEEEECT-TSCEEE-EESSC-EEEEETTTTEEEEECCEET-TEECCCCEEEEEETTEEEEEE-T-TEEEEEETTTT
T ss_pred ccceeEEEECC-CCCEEE-EeCCc-hheeCCCCCeEEecccccc-CCCceEEEEEECCCCCEEEEE-C-CceEEEECCCC
Confidence 36799998888 776554 44444 8899876543111000000 000128899888888766544 3 55888887653
Q ss_pred CCCCCCCCCceEEc-CC-CCc-EEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSFS-GH-LTE-GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~~-~h-~~~-v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. ...+. ++ ... |.++...+++ .|..|..++.|..|+..+..... . ........|.++...+++.
T Consensus 161 ~--------~~~~~~~~~~~~~i~~i~~d~~g--~lwigt~~~Gl~~~~~~~~~~~~--~-~~~~~~~~i~~i~~d~~g~ 227 (795)
T 4a2l_A 161 K--------FIDDSFSTAMHKTIASTLYRQGD--QIYIGTSTDGLYTYSITQKTFEK--V-IPILGTKQIQAILQQSPTR 227 (795)
T ss_dssp E--------EECSSSCHHHHTCCEEEEEEETT--EEEEEESSSCEEEEETTTCCEEE--C-C----CCCEEEEEEEETTE
T ss_pred E--------EEeccCCCCCCcceEEEEECCCC--CEEEEECCCCEEEEeCCCCeEEE--e-cCCCCCCeeEEEEEcCCCC
Confidence 1 11111 11 112 7888887775 45556665568999987664211 1 0112345788998888776
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCC-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPN-------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
|..++.++-|.+||..+.. ...+.. -....|.++...++|.+.+ |+.+ -|.+||... ....
T Consensus 228 --lwigt~~~Gl~~~~~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~----~~~~ 295 (795)
T 4a2l_A 228 --IWVATEGAGLFLINPKTKE----IKNYLHSPSNPKSISSNYIRSLAMDSQNRLWI-GTFN-DLNIYHEGT----DSFA 295 (795)
T ss_dssp --EEEEEBSSCEEEEETTTTE----EEEECCCTTCTTSCSCSBEEEEEECTTSCEEE-EESS-CEEEEETTT----TEEE
T ss_pred --EEEEECCCCeEEEeCCCCe----EEEeecCCCCccccCCCeEEEEEEcCCCCEEE-EeCC-hhheEcCCC----CeEE
Confidence 4455555558889976422 111111 1245699999998887544 4445 488899753 2233
Q ss_pred Ecc--------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEE
Q psy4510 406 TFK--------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELH 477 (812)
Q Consensus 406 ~~~--------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 477 (812)
.+. .....|.++...++| .|..|+.++-|..|+....... .....+. ........|.++.
T Consensus 296 ~~~~~~~~~~~l~~~~i~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~-------~~~~~~~---~~~l~~~~V~~i~ 363 (795)
T 4a2l_A 296 SYSSNPVENGSLSQRSVRSIFMDSQG--GMWLGTYFGGLNYYHPIRNRFK-------NIRNIPY---KNSLSDNVVSCIV 363 (795)
T ss_dssp EECCCTTSTTSCSSSCEEEEEECTTS--CEEEEESSSCEEEECGGGGSSE-------EECCCTT---SSSCSCSSEEEEE
T ss_pred EEecCCCCCCCCCCCcEEEEEEeCCc--CEEEEECCCCeEEeCCCcccce-------EEcCCCC---CCCCCCCeeEEEE
Confidence 332 123579999998876 3667777777999986544210 0000000 0001134688888
Q ss_pred EcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEe------ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcc
Q psy4510 478 WHPQLPGTIISTANSGFNIFRTISDLPSQLLFI------HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTS 551 (812)
Q Consensus 478 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~ 551 (812)
..+++ .+.+++..+|+..|............. ......|.++...+++..+.+++...+...+ ....
T Consensus 364 ~d~~g-~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~---d~~~--- 436 (795)
T 4a2l_A 364 EDKDK-NLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSIL---HRNS--- 436 (795)
T ss_dssp ECTTS-CEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEE---ETTT---
T ss_pred ECCCC-CEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEE---eCCC---
Confidence 88875 466666666887776443221111100 0123568888887763114555544432222 1110
Q ss_pred cccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccc
Q psy4510 552 TEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQL 631 (812)
Q Consensus 552 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~ 631 (812)
+. .... . ...+ ......|.++...++|...+.. . +.|.+|+..++.-..
T Consensus 437 ~~----~~~~--~---------~~~~------~l~~~~v~~i~~d~~g~lwigt---~-~Gl~~~~~~~~~~~~------ 485 (795)
T 4a2l_A 437 GQ----VENF--N---------QRNS------QLVNENVYAILPDGEGNLWLGT---L-SALVRFNPEQRSFTT------ 485 (795)
T ss_dssp CC----EEEE--C---------TTTS------CCSCSCEEEEEECSSSCEEEEE---S-SCEEEEETTTTEEEE------
T ss_pred Cc----EEEe--e---------cCCC------CcCCCeeEEEEECCCCCEEEEe---c-CceeEEeCCCCeEEE------
Confidence 00 0000 0 0000 0123468888888888755543 3 458888877653110
Q ss_pred cccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------------eEEEE
Q psy4510 632 AEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA---------------WSVYL 696 (812)
Q Consensus 632 ~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~---------------~~~~~ 696 (812)
.... . .. -.-....|.++...+ ++.+.+... +-|..|+..++.. +..++
T Consensus 486 --~~~~-~--------~~--~~~~~~~i~~i~~d~-~g~lWigt~--~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~ 549 (795)
T 4a2l_A 486 --IEKE-K--------DG--TPVVSKQITTLFRDS-HKRLWIGGE--EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIY 549 (795)
T ss_dssp --CCBC-T--------TC--CBCCCCCEEEEEECT-TCCEEEEES--SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEE
T ss_pred --cccc-c--------cc--cccCCceEEEEEECC-CCCEEEEeC--CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEE
Confidence 0000 0 00 001235789999988 666655544 4466777654332 23344
Q ss_pred ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC-CcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 697 YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 697 ~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH-~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
..++|++.+... . -+..|+..+++. . ......|- ...|.++...++|. +.+++. +-|..|+.+..
T Consensus 550 ~d~~g~lWigT~-~-Gl~~~d~~~~~~-~-~~~~~~gl~~~~i~~i~~d~~g~-lWi~t~--~Gl~~~~~~~~ 615 (795)
T 4a2l_A 550 EASNGIIWVGTR-E-GFYCFNEKDKQI-K-RYNTTNGLPNNVVYGILEDSFGR-LWLSTN--RGISCFNPETE 615 (795)
T ss_dssp ECTTSCEEEEES-S-CEEEEETTTTEE-E-EECGGGTCSCSCEEEEEECTTSC-EEEEET--TEEEEEETTTT
T ss_pred ECCCCCEEEEeC-C-CceeECCCCCcE-E-EeCCCCCCchhheEEEEECCCCC-EEEEcC--CceEEEcCCCC
Confidence 566777554443 3 578888766531 1 01111222 24688999999998 566553 34555555433
No 212
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.16 E-value=9.3e-09 Score=103.18 Aligned_cols=187 Identities=10% Similarity=0.045 Sum_probs=137.8
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~ 311 (812)
..++.|++++.++.|.+||.+++ +.+.++..+. ..+.++.++|+| ++|+ +.++.|..||. +++ .
T Consensus 3 ~~~~~lv~~~~~~~v~~~d~~tG-------~~~w~~~~~~~~~~~~~~~~pdG-~ilv--s~~~~V~~~d~-~G~----~ 67 (276)
T 3no2_A 3 SPQHLLVGGSGWNKIAIINKDTK-------EIVWEYPLEKGWECNSVAATKAG-EILF--SYSKGAKMITR-DGR----E 67 (276)
T ss_dssp CCCEEEEECTTCSEEEEEETTTT-------EEEEEEECCTTCCCCEEEECTTS-CEEE--ECBSEEEEECT-TSC----E
T ss_pred CCCcEEEeeCCCCEEEEEECCCC-------eEEEEeCCCccCCCcCeEECCCC-CEEE--eCCCCEEEECC-CCC----E
Confidence 34678999999999999999886 7778887766 478899999998 6777 34678999999 555 3
Q ss_pred cccccCC-CCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCcccceeecC-----CcCCCCeEEEEEcCCCCEEEEE
Q psy4510 312 QKPLVGH-TNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINTKSCMLTLP-----NAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 312 ~~~~~~h-~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~-----~~~~~~v~~l~~~~~~~~l~sg 384 (812)
...+..+ ...+.++.+.|+|+ ++++.+. ++.|..+|.. + +.+..+. ..+......+++.++|+++++.
T Consensus 68 ~W~~~~~~~~~~~~~~~~~dG~-~lv~~~~~~~~v~~vd~~-G---k~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 68 LWNIAAPAGCEMQTARILPDGN-ALVAWCGHPSTILEVNMK-G---EVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp EEEEECCTTCEEEEEEECTTSC-EEEEEESTTEEEEEECTT-S---CEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred EEEEcCCCCccccccEECCCCC-EEEEecCCCCEEEEEeCC-C---CEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 3334333 34788999999999 5777666 7778777753 2 2222221 1122234556788999999999
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
..++.|.+||.. ++.+.++..+ ..+.++...+++ .++++++.+++|..+|..+++
T Consensus 143 ~~~~~v~~~d~~----G~~~w~~~~~-~~~~~~~~~~~g-~~~v~~~~~~~v~~~d~~tG~ 197 (276)
T 3no2_A 143 FATSEVREIAPN----GQLLNSVKLS-GTPFSSAFLDNG-DCLVACGDAHCFVQLNLESNR 197 (276)
T ss_dssp TTTTEEEEECTT----SCEEEEEECS-SCCCEEEECTTS-CEEEECBTTSEEEEECTTTCC
T ss_pred cCCCEEEEECCC----CCEEEEEECC-CCccceeEcCCC-CEEEEeCCCCeEEEEeCcCCc
Confidence 999999999984 6777777754 345667788876 588888878889999988774
No 213
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.14 E-value=3.9e-09 Score=111.27 Aligned_cols=134 Identities=8% Similarity=-0.047 Sum_probs=91.1
Q ss_pred CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCCc-
Q psy4510 295 RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPNA- 364 (812)
Q Consensus 295 g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~- 364 (812)
+.|.+.|+.+.+ ....+.--..+ .++++|+++.++++.. .++.|.++|..+... +..+...
T Consensus 99 ~~VsVID~~t~~----vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v---v~~I~v~g 169 (426)
T 3c75_H 99 TQQFVIDGSTGR----ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP---IADIELPD 169 (426)
T ss_dssp EEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE---EEEEEETT
T ss_pred CeEEEEECCCCE----EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE---EEEEECCC
Confidence 699999999876 33333322334 8999999997666653 467899999986443 3333111
Q ss_pred -----CCCCeEEEEEcCCCCEEEEEeC--CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEE
Q psy4510 365 -----HTSDVNVISWNRTEPLIVSGGD--DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIA 437 (812)
Q Consensus 365 -----~~~~v~~l~~~~~~~~l~sg~~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~ 437 (812)
.......+.++|+|++++++.. ++.|.+.|+. ..+.+.++.-. .. ....|.+...+++.+.||++.
T Consensus 170 ~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~---t~kvv~~I~v~--g~--~~~~p~g~~~~v~~~~dG~~~ 242 (426)
T 3c75_H 170 APRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLE---GKTFDRMLDVP--DC--YHIFPASPTVFYMNCRDGSLA 242 (426)
T ss_dssp CCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETT---TTEEEEEEECC--SE--EEEEEEETTEEEEEETTSSEE
T ss_pred ccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECC---CCeEEEEEEcC--Cc--eeeccCCCcEEEEEcCCCCEE
Confidence 1223457899999998888764 5789999998 45566665532 11 344566656778888899999
Q ss_pred EEEcCCC
Q psy4510 438 LWDLAVE 444 (812)
Q Consensus 438 iwd~~~~ 444 (812)
+.++...
T Consensus 243 ~V~~~~~ 249 (426)
T 3c75_H 243 RVDFADG 249 (426)
T ss_dssp EEECCTT
T ss_pred EEECCCC
Confidence 8888444
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.13 E-value=1.3e-08 Score=103.84 Aligned_cols=233 Identities=10% Similarity=0.075 Sum_probs=148.2
Q ss_pred CeeeeeEcCCCCcE-EEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 225 SAEDLQWSDLKTAL-QTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 225 ~V~~l~~s~~~~~l-~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
--.+..|++++..| .+....+.|..|+..++ ....+ .....+.++++++++ .++++ . ++.|.+||..
T Consensus 14 ~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~--------~~~~~-~~~~~~~~i~~~~dG-~l~v~-~-~~~l~~~d~~ 81 (297)
T 3g4e_A 14 CGESPVWEEVSNSLLFVDIPAKKVCRWDSFTK--------QVQRV-TMDAPVSSVALRQSG-GYVAT-I-GTKFCALNWK 81 (297)
T ss_dssp BEEEEEEETTTTEEEEEETTTTEEEEEETTTC--------CEEEE-ECSSCEEEEEEBTTS-SEEEE-E-TTEEEEEETT
T ss_pred cccCCeEECCCCEEEEEECCCCEEEEEECCCC--------cEEEE-eCCCceEEEEECCCC-CEEEE-E-CCeEEEEECC
Confidence 44577888865544 55556889999998874 22233 245679999999998 55444 4 5689999988
Q ss_pred CCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEECC---------CeEEEEECCCCCcccceeecCCcCCCCeEEEE
Q psy4510 304 EAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSVD---------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVIS 373 (812)
Q Consensus 304 ~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~d---------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~ 373 (812)
++..... ..... .....+++++++|+|+ ++++.... ..-.||.+..... +..+ ..+....+.++
T Consensus 82 ~g~~~~~-~~~~~~~~~~~~~di~~d~dG~-l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~---~~~~-~~~~~~pngi~ 155 (297)
T 3g4e_A 82 EQSAVVL-ATVDNDKKNNRFNDGKVDPAGR-YFAGTMAEETAPAVLERHQGALYSLFPDHH---VKKY-FDQVDISNGLD 155 (297)
T ss_dssp TTEEEEE-EECCTTCSSEEEEEEEECTTSC-EEEEEEECCSBTTBCCTTCEEEEEECTTSC---EEEE-EEEESBEEEEE
T ss_pred CCcEEEE-EecCCCCCCCCCCCEEECCCCC-EEEecCCcccccccccCCCcEEEEEECCCC---EEEE-eeccccccceE
Confidence 7642111 11111 1234589999999998 55544321 2345555542211 1112 22334568999
Q ss_pred EcCCCCEE-EEEeCCCcEEEEecCCCCCCC-----ceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCch
Q psy4510 374 WNRTEPLI-VSGGDDGCIHVWDLRRFKKGS-----SVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDS 447 (812)
Q Consensus 374 ~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~-----~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~ 447 (812)
|+|+++.| ++.+.++.|.+|++... .+. .+..+..+.+....+++.++| ++.++....+.|..||..+++
T Consensus 156 ~spdg~~lyv~~~~~~~i~~~~~d~~-~G~~~~~~~~~~~~~~~~~p~g~~~d~~G-~lwva~~~~~~v~~~d~~tG~-- 231 (297)
T 3g4e_A 156 WSLDHKIFYYIDSLSYSVDAFDYDLQ-TGQISNRRSVYKLEKEEQIPDGMCIDAEG-KLWVACYNGGRVIRLDPVTGK-- 231 (297)
T ss_dssp ECTTSCEEEEEEGGGTEEEEEEECTT-TCCEEEEEEEEECCGGGCEEEEEEEBTTS-CEEEEEETTTEEEEECTTTCC--
T ss_pred EcCCCCEEEEecCCCCcEEEEeccCC-CCcccCcEEEEECCCCCCCCCeeEECCCC-CEEEEEcCCCEEEEEcCCCce--
Confidence 99999855 55666789999997410 222 223334444667899999987 577777777889999988663
Q ss_pred hHHHhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCC
Q psy4510 448 EIEQREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSG 493 (812)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~ 493 (812)
.+.........+++++|. |+...++++++..+
T Consensus 232 --------------~~~~i~~p~~~~t~~~f~g~d~~~L~vt~~~~~ 264 (297)
T 3g4e_A 232 --------------RLQTVKLPVDKTTSCCFGGKNYSEMYVTCARDG 264 (297)
T ss_dssp --------------EEEEEECSSSBEEEEEEESGGGCEEEEEEBCTT
T ss_pred --------------EEEEEECCCCCceEEEEeCCCCCEEEEEcCCcC
Confidence 222333334578999998 78777778777654
No 215
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.12 E-value=4.5e-05 Score=89.02 Aligned_cols=494 Identities=10% Similarity=-0.023 Sum_probs=259.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC---CCCCCeeeeeEcC--CCCcEEEeeCCCceEEee
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG---GHTNSAEDLQWSD--LKTALQTVDDPFQLAEHN 251 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~---~h~~~V~~l~~s~--~~~~l~s~~~d~~i~vwd 251 (812)
+.|.++...+ +++.|..|+.++-+..||..+..-......... -....|.++.... ++.. -.+...+.+..++
T Consensus 66 n~I~~i~~d~-~g~~lWigt~~~Gl~~~d~~~~~f~~~~~~~~~~~~l~~~~i~~i~~d~~~~g~l-wi~t~~~gl~~~~ 143 (781)
T 3v9f_A 66 NELNEVYTDP-VQPVIWIATQRAGLNAYNYETQSFSVYQYNPEDPQSLITNDVTHITSSVQAGKGL-WVCTYYRGIEYLD 143 (781)
T ss_dssp SCEEEEEECS-SSSEEEEEESSSCEEEEETTTTEEEEECCCTTCSSSCSCSCEEEEEECSSTTSEE-EEEESSSCEEEEE
T ss_pred cccceEEEcC-CCCEEEEEeCCCCcceECCCCCeEEeeccccCCCCCcccCcceEEEecCccCCCE-EEEECCCCeeEEE
Confidence 5688998777 777355566664699999876542111000001 1124688888877 6654 4455455677888
Q ss_pred CCCCCCCCCCCCCceEEcC------CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc---ccCCCCCE
Q psy4510 252 KKRGKGPGIPTPPLFSFSG------HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSV 322 (812)
Q Consensus 252 ~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~---~~~h~~~v 322 (812)
..++ ....+.. ....|.++...+++ .|..|..++-|..|+..+.......... ..-....|
T Consensus 144 ~~~~--------~~~~~~~~~~~~l~~~~i~~i~~d~~g--~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i 213 (781)
T 3v9f_A 144 IATG--------KFTHYNKSTVPALPSEQTWTATEAEDG--KLYIGHVEGGLSILSLNDKSVKHFVHDPQNPNSLPGNDV 213 (781)
T ss_dssp TTTT--------EEEEESTTTCTTCSCCCEEEEEEEETT--EEEEEETTTEEEEEETTTTEEEEECC--------CCSSE
T ss_pred CCCC--------eEEeeccCcccCCCccceEEEEECCCC--CEEEEecCCCeEEEcCCCCceEeeecCCCCcccCCCCce
Confidence 7653 1222211 12457888877765 5555666656889998765311100000 00123569
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-------cCCCCeEEEEEcCCCCEEEEEeCCCcEEEEec
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-------AHTSDVNVISWNRTEPLIVSGGDDGCIHVWDL 395 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-------~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~ 395 (812)
.++...+++. |..|+.. -|.+||..+.. ...+.. .....|.++...++|. |..|+..+-|.++|.
T Consensus 214 ~~i~~d~~g~--lwigt~~-Gl~~~d~~~~~----~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lWigt~~~Gl~~~~~ 285 (781)
T 3v9f_A 214 RCIYKDTNGN--IWIGTSK-GLALFNANTET----FTNFHNNPGNIHGALSSYIFSIKQLKDNK-LWIATELNGIMILDL 285 (781)
T ss_dssp EEEEECTTCC--EEEEETT-EEEEEETTTTE----EEC-----------CCCCEEEEEECTTSE-EEEEESSSCEEEEET
T ss_pred eEEEEcCCCC--EEEEeCC-cHheECCCCCc----EEEEEcCCCccccccCceEEEEEECCCCC-EEEEeCCCCeEEECC
Confidence 9999988887 4445555 68899976422 111111 1245699999888775 555666456888988
Q ss_pred CCCCCCCceEE------------cccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCce
Q psy4510 396 RRFKKGSSVAT------------FKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQL 463 (812)
Q Consensus 396 ~~~~~~~~~~~------------~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 463 (812)
....- ..... .......|.++...+++ .|..|+.++-|..++........ ....+...
T Consensus 286 ~~~~~-~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g--~lWigt~~~Gl~~~~~~~~~~~~-------~~~~~~~~ 355 (781)
T 3v9f_A 286 QQNQF-LLPEQIRFEFIREGDNNYSLSNASARYIFQDSFN--NIWIGTWGGGINFISNAPPTFHT-------WSYSPTQM 355 (781)
T ss_dssp TCC----------CEEECBCSSTTSBSSSCEEEEEECSSC--CEEEEEBSSCEEEECSSCCSCEE-------EC----CC
T ss_pred CCCee-eeeeccccccccCCCCCCCCCCCeEEEEEEeCCC--CEEEEecCCeEEEeCCCCCccee-------eccCcccc
Confidence 63111 01111 01134579999888876 36667767779999876542100 00000000
Q ss_pred EEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEE-eecCCCCeeEEEEcCCCCCeEEEeeCCCceEEE
Q psy4510 464 LFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLF-IHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 542 (812)
Q Consensus 464 ~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~ 542 (812)
.........|.++...+++ .+.+++..+|+..+............ .......|.++...+++ .+.+++...+...+
T Consensus 356 ~~~~l~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~- 432 (781)
T 3v9f_A 356 NESSLSNKVVSSVCDDGQG-KLWIGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEG-NLWFGTYLGNISYY- 432 (781)
T ss_dssp CSSCCSSSCEEEEEECTTS-CEEEEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTS-CEEEEETTEEEEEE-
T ss_pred ccCCCCCcceEEEEEcCCC-CEEEEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCC-CEEEEeccCCEEEE-
Confidence 0000112468888888765 46666657788777643221111100 01123567788777662 34444332322111
Q ss_pred EeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccc
Q psy4510 543 TISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTAL 622 (812)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~ 622 (812)
... ... .... ... ......|.++...++|...+.. . +.|.+|+..++.
T Consensus 433 --~~~---~~~----~~~~-------------~~~------~~~~~~v~~i~~d~~g~lwigt---~-~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 433 --NTR---LKK----FQII-------------ELE------KNELLDVRVFYEDKNKKIWIGT---H-AGVFVIDLASKK 480 (781)
T ss_dssp --CSS---SCE----EEEC-------------CST------TTCCCCEEEEEECTTSEEEEEE---T-TEEEEEESSSSS
T ss_pred --cCC---CCc----EEEe-------------ccC------CCCCCeEEEEEECCCCCEEEEE---C-CceEEEeCCCCe
Confidence 110 000 0000 000 1123468888888877644443 3 568888877653
Q ss_pred cccCCcccccccccccCCCCCCCCCCeeee---cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce--------
Q psy4510 623 QTVDDPFQLAEHNKKRGKGPGIPTPPLFSF---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA-------- 691 (812)
Q Consensus 623 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~-------- 691 (812)
-. ..... ......|.+++..+ ++.+.+.....| |..++..+++.
T Consensus 481 ~~-----------------------~~~~~~~~~~~~~~i~~i~~d~-~g~lWigt~~~G-l~~~~~~~~~~~~~~~~~~ 535 (781)
T 3v9f_A 481 VI-----------------------HHYDTSNSQLLENFVRSIAQDS-EGRFWIGTFGGG-VGIYTPDMQLVRKFNQYEG 535 (781)
T ss_dssp CC-----------------------EEECTTTSSCSCSCEEEEEECT-TCCEEEEESSSC-EEEECTTCCEEEEECTTTT
T ss_pred EE-----------------------ecccCcccccccceeEEEEEcC-CCCEEEEEcCCC-EEEEeCCCCeEEEccCCCC
Confidence 11 00000 01135789999988 665555443344 55677655322
Q ss_pred -----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCC-CcceeEeEEecCCceeEEeeccCCceEEeee
Q psy4510 692 -----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASCSVDRSNRIGAR 765 (812)
Q Consensus 692 -----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH-~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~ 765 (812)
+..++..++|.+.++.. .|.|..|+..+++- . ......|- ...|.++...++|. +.+++ ..| |..++.
T Consensus 536 l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~~-~-~~~~~~gl~~~~i~~i~~d~~g~-lW~~t-~~G-l~~~~~ 609 (781)
T 3v9f_A 536 FCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFDY-Q-VFQRKEGLPNTHIRAISEDKNGN-IWAST-NTG-ISCYIT 609 (781)
T ss_dssp CSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCCC-E-EECGGGTCSCCCCCEEEECSSSC-EEEEC-SSC-EEEEET
T ss_pred CCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCcE-E-EccccCCCCCceEEEEEECCCCC-EEEEc-CCc-eEEEEC
Confidence 23334556777555443 66658899876642 1 11111121 23588899999998 55554 334 444444
Q ss_pred c
Q psy4510 766 R 766 (812)
Q Consensus 766 ~ 766 (812)
+
T Consensus 610 ~ 610 (781)
T 3v9f_A 610 S 610 (781)
T ss_dssp T
T ss_pred C
Confidence 3
No 216
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.11 E-value=8.8e-09 Score=106.48 Aligned_cols=243 Identities=9% Similarity=-0.005 Sum_probs=153.4
Q ss_pred EEeCCCCCCeEEEec----------CCCcEEEEccCCCCcccccccccCC-----CCCCeeeeeEcCCCCcEEEeeC--C
Q psy4510 182 MDWSSTEPGVLATGD----------CKRNIHIWTPREAGAWQVDQKPLGG-----HTNSAEDLQWSDLKTALQTVDD--P 244 (812)
Q Consensus 182 ~~~sp~~~~~lat~~----------~dg~v~iwd~~~~~~~~~~~~~l~~-----h~~~V~~l~~s~~~~~l~s~~~--d 244 (812)
+++|| +|++|++++ .++.|.+||..+.+..... .+.. ....-..++|+|||++|..+.. +
T Consensus 83 va~sp-DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I--~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 83 PVVAD-DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADI--ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEECT-TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE--EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred EEECC-CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEE--ECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 99999 999887765 3678999999987732211 1111 1234668999999999988763 6
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecc-ccccCCCCCE-
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSV- 322 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~-~~~~~h~~~v- 322 (812)
+.|.++|..++ +.+.++.-.. . ....|.+...+++.+.||.+.+.++.......... ..+..-...+
T Consensus 160 ~~VsVID~~t~-------~vv~tI~v~g--~--~~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~ 228 (386)
T 3sjl_D 160 PAVGVVDLEGK-------AFKRMLDVPD--C--YHIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLI 228 (386)
T ss_dssp CEEEEEETTTT-------EEEEEEECCS--E--EEEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBC
T ss_pred CeEEEEECCCC-------cEEEEEECCC--c--ceeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceecccccccc
Confidence 89999999985 5555654311 1 22335555677788889999999987633211100 1111111222
Q ss_pred EEEEEc-CCCCeEEEEEECCCeEEEEECCCCCcccceeec---------CCcCCCCeEEEEEcCCCCEEEEEeC------
Q psy4510 323 EDLQWS-PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL---------PNAHTSDVNVISWNRTEPLIVSGGD------ 386 (812)
Q Consensus 323 ~~~~~~-p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~---------~~~~~~~v~~l~~~~~~~~l~sg~~------ 386 (812)
....|. ++|+ +++ .+.+|.|.+.|+..... ..+..+ ..........++++++++.++....
T Consensus 229 ~~~~~~~~dG~-~~~-vs~~g~V~v~d~~~~~~-~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~ 305 (386)
T 3sjl_D 229 NHPAYSQKAGR-LVW-PTYTGKIHQIDLSSGDA-KFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWR 305 (386)
T ss_dssp SCCEEETTTTE-EEE-EBTTSEEEEEECTTSSC-EECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTC
T ss_pred ccceeEcCCCc-EEE-EeCCCEEEEEECCCCcc-eeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccc
Confidence 224664 6665 333 55689999999874321 111111 0112234445777899886665532
Q ss_pred ----CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEE-ECCCCEEEEEcCCCC
Q psy4510 387 ----DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASG-GADDQIALWDLAVER 445 (812)
Q Consensus 387 ----dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~-~~dg~v~iwd~~~~~ 445 (812)
.+.|.++|+. +.+.+..+.. ...+.+|.++|++..+|+++ ..++.|.++|..+.+
T Consensus 306 hk~~~~~V~viD~~---t~kv~~~i~v-g~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k 365 (386)
T 3sjl_D 306 HKTASRFVVVLDAK---TGERLAKFEM-GHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGE 365 (386)
T ss_dssp TTSCEEEEEEEETT---TCCEEEEEEE-EEEECEEEECSSSSCEEEEEETTTTEEEEEETTTCC
T ss_pred cCCCCCEEEEEECC---CCeEEEEEEC-CCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCc
Confidence 2579999998 4666666653 23678999999985455554 558999999999874
No 217
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.09 E-value=6.3e-09 Score=106.64 Aligned_cols=232 Identities=11% Similarity=0.084 Sum_probs=148.9
Q ss_pred CCCceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 175 HLTEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 175 h~~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
........+|+| +++ +++++..++.|..|+.. ++ ...+..+...+..++++++|+++++....+.|.+|+..
T Consensus 43 ~~~~~egp~~~~-~g~~l~~~d~~~~~i~~~~~~-g~-----~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~ 115 (305)
T 3dr2_A 43 QATWSEGPAWWE-AQRTLVWSDLVGRRVLGWRED-GT-----VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD 115 (305)
T ss_dssp CCSSEEEEEEEG-GGTEEEEEETTTTEEEEEETT-SC-----EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT
T ss_pred CCcCccCCeEeC-CCCEEEEEECCCCEEEEEeCC-CC-----EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC
Confidence 344567899999 887 77888888999999873 32 22334456678999999999966665566789999875
Q ss_pred CCCCCCCCCCCceEEcCC-----CCcEEEEEecCCCCCEEEE----EeC-------------CCcEEEEeCCCCCcceec
Q psy4510 254 RGKGPGIPTPPLFSFSGH-----LTEGFAMDWSSTEPGVLAT----GDC-------------KRNIHIWTPREAGAWQVD 311 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h-----~~~v~~l~~sp~~~~~l~s----g~~-------------dg~i~vwd~~~~~~~~~~ 311 (812)
+ + +..+..+ ...+..+++.|+| .++++ |.. .+.|..++..++...
T Consensus 116 -g-------~-~~~~~~~~~~~~~~~~~~i~~d~dG-~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~--- 182 (305)
T 3dr2_A 116 -G-------Q-AHLLVGRYAGKRLNSPNDLIVARDG-AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQ--- 182 (305)
T ss_dssp -S-------C-EEEEECEETTEECSCCCCEEECTTS-CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCE---
T ss_pred -C-------C-EEEEEeccCCCccCCCCCEEECCCC-CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEE---
Confidence 3 1 1222111 1245679999998 67775 332 245777777655421
Q ss_pred cccccCCCCCEEEEEEcCCCCeEEEEEECC------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 312 QKPLVGHTNSVEDLQWSPGEKRVLASCSVD------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 312 ~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.+. .....+.++|+|+++. |+.+... +.|.+|++.... ......+..........+++.++|++.++ +
T Consensus 183 --~~~-~~~~p~gl~~spdg~~-lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~ 256 (305)
T 3dr2_A 183 --RMA-DLDHPNGLAFSPDEQT-LYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGWLWSS-S 256 (305)
T ss_dssp --EEE-EESSEEEEEECTTSSE-EEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSCEEEC-C
T ss_pred --EEe-cCCCCcceEEcCCCCE-EEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCCEEEe-c
Confidence 112 3345788999999985 4444443 789999986422 11111111122344567899999985444 4
Q ss_pred CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
.+ .|.+|+.. ++.+..+..+. .+.+++|.|++ ..|..++.++ +..++
T Consensus 257 ~~-gv~~~~~~----g~~~~~~~~~~-~~~~~~f~~d~-~~L~it~~~~-l~~~~ 303 (305)
T 3dr2_A 257 GT-GVCVFDSD----GQLLGHIPTPG-TASNCTFDQAQ-QRLFITGGPC-LWMLP 303 (305)
T ss_dssp SS-EEEEECTT----SCEEEEEECSS-CCCEEEECTTS-CEEEEEETTE-EEEEE
T ss_pred CC-cEEEECCC----CCEEEEEECCC-ceeEEEEeCCC-CEEEEEcCCe-EEEEE
Confidence 44 49999984 55666666554 58899999876 4666666554 44433
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.08 E-value=1.5e-08 Score=104.64 Aligned_cols=277 Identities=9% Similarity=-0.033 Sum_probs=164.0
Q ss_pred eCCCCCCeEEEecC-----CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceE
Q psy4510 184 WSSTEPGVLATGDC-----KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLA 248 (812)
Q Consensus 184 ~sp~~~~~lat~~~-----dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~ 248 (812)
..| +++.+.+... ++.|.+.|..+.+ ....+..-..+ .++++|+|++|..++ .++.|.
T Consensus 40 ~~p-d~~~vyV~~~~~~~~~~~V~ViD~~t~~----v~~~I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vs 112 (386)
T 3sjl_D 40 PAP-DARRVYVNDPAHFAAVTQQFVIDGEAGR----VIGMIDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVE 112 (386)
T ss_dssp CCC-CTTEEEEEECGGGCSSEEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEE
T ss_pred cCC-CCCEEEEEcCcccCCCCEEEEEECCCCe----EEEEEECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEE
Confidence 346 7776666543 6799999998876 33344433344 399999999998775 367899
Q ss_pred EeeCCCCCCCCCCCCCceEEcCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHT 319 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~ 319 (812)
+||..+. +.+.++.-. ......++|+|+| ++|+++.. ++.|.++|+.+.+. ...+.-.
T Consensus 113 viD~~t~-------~v~~~I~v~~g~r~~~g~~P~~~a~spDG-k~lyVan~~~~~~VsVID~~t~~v----v~tI~v~- 179 (386)
T 3sjl_D 113 VFDPVTL-------LPTADIELPDAPRFLVGTYPWMTSLTPDG-KTLLFYQFSPAPAVGVVDLEGKAF----KRMLDVP- 179 (386)
T ss_dssp EECTTTC-------CEEEEEEETTCCCCCBSCCGGGEEECTTS-SEEEEEECSSSCEEEEEETTTTEE----EEEEECC-
T ss_pred EEECCCC-------eEEEEEECCCccccccCCCCceEEEcCCC-CEEEEEEcCCCCeEEEEECCCCcE----EEEEECC-
Confidence 9999885 555555321 1234579999999 56666553 68999999998862 2222211
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-ecCCcCCCCeE-EEEEc-CCCCEEEEEeCCCcEEEEecC
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-TLPNAHTSDVN-VISWN-RTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~~~~~~v~-~l~~~-~~~~~l~sg~~dg~i~iwd~~ 396 (812)
+ . .. ..|.+...+++.+.||.+.+.++.......... .........+. ...|. ++|++++ .+.+|.|.+.|+.
T Consensus 180 g-~-~~-~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~ 255 (386)
T 3sjl_D 180 D-C-YH-IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLS 255 (386)
T ss_dssp S-E-EE-EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECT
T ss_pred C-c-ce-eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECC
Confidence 1 1 12 235444457788889999999987522211101 01011112221 23554 5665444 5568999999996
Q ss_pred CCCCCCceEEcc----------cCCCCEEEEEEccCCCcEEEEEEC---------CCCEEEEEcCCCCchhHHHhhhhhc
Q psy4510 397 RFKKGSSVATFK----------HHTAPVTTVEWHPTESSTFASGGA---------DDQIALWDLAVERDSEIEQREAELK 457 (812)
Q Consensus 397 ~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~ 457 (812)
... ...+..+. ...+.+..++++|++.+++++... .++|.+.|+.+.+.
T Consensus 256 ~~~-~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv----------- 323 (386)
T 3sjl_D 256 SGD-AKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGER----------- 323 (386)
T ss_dssp TSS-CEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-----------
T ss_pred CCc-ceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeE-----------
Confidence 311 01111111 012233357778887655554431 25799999998842
Q ss_pred cCCCceEEeecCCCceeEEEEcCCCCCE-EEEEe-CCCeEEEEeCCC
Q psy4510 458 DLPSQLLFIHLGQKEIKELHWHPQLPGT-IISTA-NSGFNIFRTISD 502 (812)
Q Consensus 458 ~~~~~~~~~~~~~~~v~~~~~~p~~~~~-~~~~~-~~~~~~~~~~~~ 502 (812)
+....-...+..+.+++++..+ +++.. .+.+.+++..+.
T Consensus 324 ------~~~i~vg~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~ 364 (386)
T 3sjl_D 324 ------LAKFEMGHEIDSINVSQDEKPLLYALSTGDKTLYIHDAESG 364 (386)
T ss_dssp ------EEEEEEEEEECEEEECSSSSCEEEEEETTTTEEEEEETTTC
T ss_pred ------EEEEECCCCcceEEECCCCCeEEEEEcCCCCeEEEEECCCC
Confidence 2222222368899999998644 44444 344666765543
No 219
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.06 E-value=2.8e-08 Score=105.93 Aligned_cols=202 Identities=6% Similarity=-0.014 Sum_probs=133.1
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC--cEEEEe
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWT 301 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg--~i~vwd 301 (812)
.....|+|+++++++++...++.|++|+..++ .+.++........ ++|+|++ ..|++++.++ .|.+++
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g--------~~~~~~~~~~~~~-ia~~~~g-~~l~~~d~~~~~~I~~~d 200 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDN--------KVTTVHPGFKGGK-PAVTKDK-QRVYSIGWEGTHTVYVYM 200 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTT--------EEEEEEETCCBCB-CEECTTS-SEEEEEBSSTTCEEEEEE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCC--------EEEEeeccCCCCc-eeEecCC-CcEEEEecCCCceEEEEE
Confidence 46789999999997777777899999999864 2233322233344 9999998 6788877765 788888
Q ss_pred CCCCCcceeccccc-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeec-CCcCCCCe--EEEEEcCC
Q psy4510 302 PREAGAWQVDQKPL-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTL-PNAHTSDV--NVISWNRT 377 (812)
Q Consensus 302 ~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~~~v--~~l~~~~~ 377 (812)
......... ...+ ......+.+++++|++..+++ +..++.|+.||...... ..+... ..++...- +.++|+|+
T Consensus 201 ~~~~~~~~~-~g~~~~~~~~~p~~iav~p~~g~lyv-~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 201 KASGWAPTR-IGQLGSTFSGKIGAVALDETEEWLYF-VDSNKNFGRFNVKTQEV-TLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp GGGTTCEEE-EEECCTTSCSCCCBCEECTTSSEEEE-ECTTCEEEEEETTTCCE-EEEEECCCCSCCCCSSCCEEEEETT
T ss_pred cCCCceeEE-eeeccchhcCCcEEEEEeCCCCeEEE-EECCCcEEEEECCCCCE-EEEecccccCCCCCCccccEEEeCC
Confidence 766542111 1111 214466789999996554454 67789999999874321 111000 11222222 38999995
Q ss_pred -CCEEEEEeCCCcEEEEecCCCCCCCceEEcccCC---------------CCEEEEEEccCCCcEEEEEE-CCCCEEEEE
Q psy4510 378 -EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT---------------APVTTVEWHPTESSTFASGG-ADDQIALWD 440 (812)
Q Consensus 378 -~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~---------------~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd 440 (812)
+.++++-...+.|+.|+... . +..+.++. .....++++|++ .++++-+ .+++|+.|+
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g----~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG-~lyvad~~~~~~I~~~~ 351 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDG----E-CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDG-NFYIVDGFKGYCLRKLD 351 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTC----C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTC-CEEEEETTTTCEEEEEE
T ss_pred CCEEEEEeCCCCEEEEEecCC----C-EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCC-CEEEEeCCCCCEEEEEE
Confidence 55666667788999999752 2 33333332 347899999997 4777777 788999999
Q ss_pred cCCC
Q psy4510 441 LAVE 444 (812)
Q Consensus 441 ~~~~ 444 (812)
+...
T Consensus 352 ~~~G 355 (409)
T 3hrp_A 352 ILDG 355 (409)
T ss_dssp TTTT
T ss_pred CCCC
Confidence 7655
No 220
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.04 E-value=9.4e-08 Score=98.76 Aligned_cols=228 Identities=11% Similarity=-0.038 Sum_probs=141.0
Q ss_pred eeeeeEcCCCCc-EEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 226 AEDLQWSDLKTA-LQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 226 V~~l~~s~~~~~-l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
..+.+|+|++.. +.+...++.|.+|+..++ ....+. ....+.+++|+|++ .++++ +. ..|.+||..+
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~--------~~~~~~-~~~~v~~i~~~~dg-~l~v~-~~-~gl~~~d~~~ 118 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASG--------RKTVHA-LPFMGSALAKISDS-KQLIA-SD-DGLFLRDTAT 118 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTT--------EEEEEE-CSSCEEEEEEEETT-EEEEE-ET-TEEEEEETTT
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCC--------cEEEEE-CCCcceEEEEeCCC-eEEEE-EC-CCEEEEECCC
Confidence 356788897554 455556788999998764 122232 34679999999997 55554 34 4499999877
Q ss_pred CCcceecccccc--CCCCCEEEEEEcCCCCeEEEEEEC------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC
Q psy4510 305 AGAWQVDQKPLV--GHTNSVEDLQWSPGEKRVLASCSV------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR 376 (812)
Q Consensus 305 ~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~~l~s~~~------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 376 (812)
+.... ..... .....+++++++|+|+ ++++... .+.|..++ .+ . +..+ ..+....+.++|+|
T Consensus 119 g~~~~--~~~~~~~~~~~~~~~i~~d~~G~-l~v~~~~~~~~~~~~~l~~~~--~g-~---~~~~-~~~~~~~~~i~~s~ 188 (326)
T 2ghs_A 119 GVLTL--HAELESDLPGNRSNDGRMHPSGA-LWIGTMGRKAETGAGSIYHVA--KG-K---VTKL-FADISIPNSICFSP 188 (326)
T ss_dssp CCEEE--EECSSTTCTTEEEEEEEECTTSC-EEEEEEETTCCTTCEEEEEEE--TT-E---EEEE-EEEESSEEEEEECT
T ss_pred CcEEE--EeeCCCCCCCCCCCCEEECCCCC-EEEEeCCCcCCCCceEEEEEe--CC-c---EEEe-eCCCcccCCeEEcC
Confidence 65211 11111 1124689999999998 4554432 24555555 21 1 1222 12234578999999
Q ss_pred CCCEEE-EEeCCCcEEEEecC--CC-CC--CCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHH
Q psy4510 377 TEPLIV-SGGDDGCIHVWDLR--RF-KK--GSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIE 450 (812)
Q Consensus 377 ~~~~l~-sg~~dg~i~iwd~~--~~-~~--~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~ 450 (812)
+++.++ +.+.++.|.+||+. .. .. .+.+..+........++++.+++ .++++...++.|.+||....
T Consensus 189 dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G-~lwva~~~~~~v~~~d~~g~------ 261 (326)
T 2ghs_A 189 DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEG-HIWNARWGEGAVDRYDTDGN------ 261 (326)
T ss_dssp TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTS-CEEEEEETTTEEEEECTTCC------
T ss_pred CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCC-CEEEEEeCCCEEEEECCCCC------
Confidence 998554 44567899999985 21 11 11233333344567889999987 56666656678999987422
Q ss_pred HhhhhhccCCCceEEeecCCCceeEEEEc-CCCCCEEEEEeCCC
Q psy4510 451 QREAELKDLPSQLLFIHLGQKEIKELHWH-PQLPGTIISTANSG 493 (812)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~-p~~~~~~~~~~~~~ 493 (812)
.+.........+.+++|. +++..+++++..++
T Consensus 262 -----------~~~~i~~~~~~~~~~af~g~d~~~L~vt~~~~~ 294 (326)
T 2ghs_A 262 -----------HIARYEVPGKQTTCPAFIGPDASRLLVTSAREH 294 (326)
T ss_dssp -----------EEEEEECSCSBEEEEEEESTTSCEEEEEEBCTT
T ss_pred -----------EEEEEECCCCCcEEEEEecCCCCEEEEEecCCC
Confidence 222222333468999998 77766667666554
No 221
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.04 E-value=1.1e-08 Score=117.54 Aligned_cols=236 Identities=12% Similarity=0.054 Sum_probs=145.6
Q ss_pred CCCCCeeeeeEcCCCCcEEEee-----CCCceEEeeCCCCCCCCCCCCCce-EEcCCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 221 GHTNSAEDLQWSDLKTALQTVD-----DPFQLAEHNKKRGKGPGIPTPPLF-SFSGHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 221 ~h~~~V~~l~~s~~~~~l~s~~-----~d~~i~vwd~~~~~~~~~~~~~~~-~~~~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+|...+..++|||||++||-+. ....|++||+.++ +.+. .+.+ .....++|+ ++ ..|+.++.+
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg-------~~~~~~~~~--~k~~~~~Ws-Dg-~~l~y~~~~ 194 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESK-------QPLETPLKD--VKFSGISWL-GN-EGFFYSSYD 194 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTC-------SEEEEEEEE--EESCCCEEE-TT-TEEEEEESS
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCC-------CCCccccCC--ceeccEEEe-CC-CEEEEEEec
Confidence 4667889999999999988433 3357999999986 2221 1211 112578999 98 566666665
Q ss_pred C-------------cEEEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEEEECC---CeEEEEECCCCCcccc
Q psy4510 295 R-------------NIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLASCSVD---LSIRIWDTRVINTKSC 357 (812)
Q Consensus 295 g-------------~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~d---g~i~iwd~~~~~~~~~ 357 (812)
. .|++|++.+............. |...+..+.|+|+++.++++.+.+ ..|+++|+..+.. .
T Consensus 195 ~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~--~ 272 (693)
T 3iuj_A 195 KPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENA--P 272 (693)
T ss_dssp CCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTC--C
T ss_pred CcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCC--c
Confidence 3 3999999876532222333333 455678999999999876766543 5899999875432 2
Q ss_pred eeecCCcCCCCeEEEEEcCCCC-EEEEEeCC---CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 358 MLTLPNAHTSDVNVISWNRTEP-LIVSGGDD---GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 358 ~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d---g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
...+ ..+....... |++++. +++....+ +.|.++|+..... .....+..|...+. .|++++..++++...+
T Consensus 273 ~~~l-~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~-~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~ 347 (693)
T 3iuj_A 273 LLTV-QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGP-AHWRDLIPERQQVL--TVHSGSGYLFAEYMVD 347 (693)
T ss_dssp CEEE-ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCG-GGCEEEECCCSSCE--EEEEETTEEEEEEEET
T ss_pred eEEE-eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCc-cccEEEecCCCCEE--EEEEECCEEEEEEEEC
Confidence 2333 2344444444 556666 44444443 6799999974211 12345556666665 8888876555555555
Q ss_pred C--CEEEEEcCCCCchhHHHhhhhhccCCCceEEe-ecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 434 D--QIALWDLAVERDSEIEQREAELKDLPSQLLFI-HLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 434 g--~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
+ .|++|++.... .... ......+..+.+++++..++++.+.
T Consensus 348 g~~~l~~~d~~g~~-----------------~~~l~~p~~~~~~~~~~~~d~~~l~~~~ss 391 (693)
T 3iuj_A 348 ATARVEQFDYEGKR-----------------VREVALPGLGSVSGFNGKHDDPALYFGFEN 391 (693)
T ss_dssp TEEEEEEECTTSCE-----------------EEEECCSSSSEEEECCCCTTCSCEEEEEEC
T ss_pred CeeEEEEEECCCCe-----------------eEEeecCCCceEEeeecCCCCCEEEEEecC
Confidence 5 68888887441 1111 1122346667777777766666554
No 222
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=99.03 E-value=2.6e-05 Score=91.03 Aligned_cols=489 Identities=9% Similarity=-0.048 Sum_probs=256.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
+.|.++.....+...|..++.++-|..|+..+............ .....|.++...+++...+ +...+.+..++..++
T Consensus 115 ~~i~~i~~d~~~~g~lwi~t~~~gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lwi-gt~~~Gl~~~~~~~~ 193 (781)
T 3v9f_A 115 NDVTHITSSVQAGKGLWVCTYYRGIEYLDIATGKFTHYNKSTVPALPSEQTWTATEAEDGKLYI-GHVEGGLSILSLNDK 193 (781)
T ss_dssp SCEEEEEECSSTTSEEEEEESSSCEEEEETTTTEEEEESTTTCTTCSCCCEEEEEEEETTEEEE-EETTTEEEEEETTTT
T ss_pred CcceEEEecCccCCCEEEEECCCCeeEEECCCCeEEeeccCcccCCCccceEEEEECCCCCEEE-EecCCCeEEEcCCCC
Confidence 45777765431134555565445588888765432111000000 1234688888877776555 555545788887653
Q ss_pred CCCCCCCCCceEEc--------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccc---ccCCCCCEEE
Q psy4510 256 KGPGIPTPPLFSFS--------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVED 324 (812)
Q Consensus 256 ~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~---~~~h~~~v~~ 324 (812)
....+. -....|.++...+++ . |..|... -|.+||..+.......... ..-....|.+
T Consensus 194 --------~~~~~~~~~~~~~~l~~~~i~~i~~d~~g-~-lwigt~~-Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~ 262 (781)
T 3v9f_A 194 --------SVKHFVHDPQNPNSLPGNDVRCIYKDTNG-N-IWIGTSK-GLALFNANTETFTNFHNNPGNIHGALSSYIFS 262 (781)
T ss_dssp --------EEEEECC--------CCSSEEEEEECTTC-C-EEEEETT-EEEEEETTTTEEEC-----------CCCCEEE
T ss_pred --------ceEeeecCCCCcccCCCCceeEEEEcCCC-C-EEEEeCC-cHheECCCCCcEEEEEcCCCccccccCceEEE
Confidence 111111 113568888888776 3 4445544 6889998765311000000 0112457999
Q ss_pred EEEcCCCCeEEEEEECCCeEEEEECCCCCccccee-------e---cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEe
Q psy4510 325 LQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCML-------T---LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWD 394 (812)
Q Consensus 325 ~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------~---~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd 394 (812)
+...+++. |..|+..+-|.++|........... . ........|.++...++|. |..|+.++-|..++
T Consensus 263 i~~d~~g~--lWigt~~~Gl~~~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~ 339 (781)
T 3v9f_A 263 IKQLKDNK--LWIATELNGIMILDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNN-IWIGTWGGGINFIS 339 (781)
T ss_dssp EEECTTSE--EEEEESSSCEEEEETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCC-EEEEEBSSCEEEEC
T ss_pred EEECCCCC--EEEEeCCCCeEEECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCC-EEEEecCCeEEEeC
Confidence 99988886 5667765678888886432111000 0 0012356799999988886 45566667788998
Q ss_pred cCCCCCCCceEEcc----------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceE
Q psy4510 395 LRRFKKGSSVATFK----------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLL 464 (812)
Q Consensus 395 ~~~~~~~~~~~~~~----------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 464 (812)
... .....+. .....|.++...+++ .|..|+.++-|..||..+.... .....
T Consensus 340 ~~~----~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g--~lWigt~~~Gl~~~~~~~~~~~----------~~~~~-- 401 (781)
T 3v9f_A 340 NAP----PTFHTWSYSPTQMNESSLSNKVVSSVCDDGQG--KLWIGTDGGGINVFENGKRVAI----------YNKEN-- 401 (781)
T ss_dssp SSC----CSCEEEC----CCCSSCCSSSCEEEEEECTTS--CEEEEEBSSCEEEEETTEEEEE----------CC-----
T ss_pred CCC----CcceeeccCccccccCCCCCcceEEEEEcCCC--CEEEEeCCCcEEEEECCCCeEE----------EccCC--
Confidence 763 1222221 123568999888775 3666676666999997654210 00000
Q ss_pred EeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEe
Q psy4510 465 FIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTI 544 (812)
Q Consensus 465 ~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~ 544 (812)
.......|.++...+++ .+.+++..+++..+...................|.++...++ +.+..+...+...+
T Consensus 402 -~~~~~~~v~~i~~d~~g-~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~--g~lwigt~~Gl~~~--- 474 (781)
T 3v9f_A 402 -RELLSNSVLCSLKDSEG-NLWFGTYLGNISYYNTRLKKFQIIELEKNELLDVRVFYEDKN--KKIWIGTHAGVFVI--- 474 (781)
T ss_dssp ---CCCSBEEEEEECTTS-CEEEEETTEEEEEECSSSCEEEECCSTTTCCCCEEEEEECTT--SEEEEEETTEEEEE---
T ss_pred -CCCCCcceEEEEECCCC-CEEEEeccCCEEEEcCCCCcEEEeccCCCCCCeEEEEEECCC--CCEEEEECCceEEE---
Confidence 01123468888887765 355555456766664332211100000112357888877776 44444443432222
Q ss_pred ecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccc
Q psy4510 545 SMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQT 624 (812)
Q Consensus 545 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~ 624 (812)
.... ... ..+.. . ... ......|.++...++|...+.. ..+-|..|+..+..-
T Consensus 475 ~~~~---~~~---~~~~~-~----------~~~------~~~~~~i~~i~~d~~g~lWigt---~~~Gl~~~~~~~~~~- 527 (781)
T 3v9f_A 475 DLAS---KKV---IHHYD-T----------SNS------QLLENFVRSIAQDSEGRFWIGT---FGGGVGIYTPDMQLV- 527 (781)
T ss_dssp ESSS---SSC---CEEEC-T----------TTS------SCSCSCEEEEEECTTCCEEEEE---SSSCEEEECTTCCEE-
T ss_pred eCCC---CeE---Eeccc-C----------ccc------ccccceeEEEEEcCCCCEEEEE---cCCCEEEEeCCCCeE-
Confidence 1110 000 00000 0 000 0013468889888888765553 334477788765431
Q ss_pred cCCcccccccccccCCCCCCCCCCeeeec---C-CCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce---------
Q psy4510 625 VDDPFQLAEHNKKRGKGPGIPTPPLFSFS---G-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--------- 691 (812)
Q Consensus 625 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g-h~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~--------- 691 (812)
..+. + ....|.++...+ ++.+.++.. .|.|..||..+++.
T Consensus 528 -------------------------~~~~~~~~l~~~~i~~i~~d~-~g~lWi~T~-~Glv~~~d~~~~~~~~~~~~~gl 580 (781)
T 3v9f_A 528 -------------------------RKFNQYEGFCSNTINQIYRSS-KGQMWLATG-EGLVCFPSARNFDYQVFQRKEGL 580 (781)
T ss_dssp -------------------------EEECTTTTCSCSCEEEEEECT-TSCEEEEET-TEEEEESCTTTCCCEEECGGGTC
T ss_pred -------------------------EEccCCCCCCCCeeEEEEECC-CCCEEEEEC-CCceEEECCCCCcEEEccccCCC
Confidence 1111 1 234788999988 666655544 67657888776432
Q ss_pred ----eEEEEecCCCCEEEeecCCCeEEEeecCCCCCccccccc---ccCCCcceeEeEEecCCceeEEeeccCCceEEee
Q psy4510 692 ----WSVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKP---LVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGA 764 (812)
Q Consensus 692 ----~~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~---~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd 764 (812)
+..++..++|.+.+++ ..| |..++..+... . .... +....-...++...++|+ |.-|+.+|.+ .++
T Consensus 581 ~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~~-~-~~~~~dGl~~~~f~~~~~~~~~~G~--l~~g~~~Gl~-~f~ 653 (781)
T 3v9f_A 581 PNTHIRAISEDKNGNIWAST-NTG-ISCYITSKKCF-Y-TYDHSNNIPQGSFISGCVTKDHNGL--IYFGSINGLC-FFN 653 (781)
T ss_dssp SCCCCCEEEECSSSCEEEEC-SSC-EEEEETTTTEE-E-EECGGGTCCSSCEEEEEEEECTTSC--EEEEETTEEE-EEC
T ss_pred CCceEEEEEECCCCCEEEEc-CCc-eEEEECCCCce-E-EecccCCccccccccCceEECCCCE--EEEECCCceE-EEC
Confidence 2233455667655554 444 66777665431 0 0111 111222345677788997 5556667744 445
Q ss_pred ec
Q psy4510 765 RR 766 (812)
Q Consensus 765 ~~ 766 (812)
.+
T Consensus 654 p~ 655 (781)
T 3v9f_A 654 PD 655 (781)
T ss_dssp SC
T ss_pred hh
Confidence 44
No 223
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=2.3e-08 Score=105.41 Aligned_cols=264 Identities=9% Similarity=-0.034 Sum_probs=158.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
+.|.++|..+.+ ....+..-..+ .++++|++++|..+. .++.|.++|..+. +.+.++
T Consensus 99 ~~VsVID~~t~~----vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~-------~vv~~I 165 (426)
T 3c75_H 99 TQQFVIDGSTGR----ILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTF-------LPIADI 165 (426)
T ss_dssp EEEEEEETTTTE----EEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTC-------CEEEEE
T ss_pred CeEEEEECCCCE----EEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCC-------cEEEEE
Confidence 699999998876 33334333345 899999999998876 4678999999885 555554
Q ss_pred cCC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE
Q psy4510 269 SGH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS 339 (812)
Q Consensus 269 ~~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~ 339 (812)
.-. ......+.|+|++ ++|+++.. ++.|.+.|+.+.+. ...+.- .+ +....|+++..+++.+
T Consensus 166 ~v~g~~r~~~g~~P~~~~~spDG-k~lyV~n~~~~~~VsVID~~t~kv----v~~I~v-~g---~~~~~p~g~~~~v~~~ 236 (426)
T 3c75_H 166 ELPDAPRFLVGTYQWMNALTPDN-KNLLFYQFSPAPAVGVVDLEGKTF----DRMLDV-PD---CYHIFPASPTVFYMNC 236 (426)
T ss_dssp EETTCCCCCBSCCGGGSEECTTS-SEEEEEECSSSCEEEEEETTTTEE----EEEEEC-CS---EEEEEEEETTEEEEEE
T ss_pred ECCCccccccCCCcceEEEcCCC-CEEEEEecCCCCeEEEEECCCCeE----EEEEEc-CC---ceeeccCCCcEEEEEc
Confidence 311 1234578999999 66666653 57899999998762 222221 11 1334455555677788
Q ss_pred CCCeEEEEECCCCCcccce-eecCCcCCCC-eEEEEEcCCCCEEEEEeCCCcEEEEecCCCCC--CCceEEcc-------
Q psy4510 340 VDLSIRIWDTRVINTKSCM-LTLPNAHTSD-VNVISWNRTEPLIVSGGDDGCIHVWDLRRFKK--GSSVATFK------- 408 (812)
Q Consensus 340 ~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~-v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~--~~~~~~~~------- 408 (812)
.||.+.+.+.......... ..+ .....+ ...+.+.+++..++.....+.|.+.|+..... ........
T Consensus 237 ~dG~~~~V~~~~~~v~~~~~~~~-~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g 315 (426)
T 3c75_H 237 RDGSLARVDFADGETKVTNTEVF-HTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADD 315 (426)
T ss_dssp TTSSEEEEECCTTCCEEEECCCC-SCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGT
T ss_pred CCCCEEEEECCCCcEEEEeeeee-ccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccc
Confidence 8888888888432211000 011 111111 12356788888666667789999999853110 00111000
Q ss_pred cCCCCEEEEEEccCCCcEEEEEEC---------CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEc
Q psy4510 409 HHTAPVTTVEWHPTESSTFASGGA---------DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWH 479 (812)
Q Consensus 409 ~h~~~v~~v~~~p~~~~~l~s~~~---------dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 479 (812)
........+.++|++.+++++... .+.|.+.|+.+.+. +...........+.|+
T Consensus 316 ~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kv-----------------v~~I~vg~~P~gia~s 378 (426)
T 3c75_H 316 WRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGER-----------------INKIELGHEIDSINVS 378 (426)
T ss_dssp EEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCE-----------------EEEEEEEEEECEEEEC
T ss_pred cccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeE-----------------EEEEECCCCcCeEEEc
Confidence 001111236899997655555431 35799999998842 2222212358899999
Q ss_pred CCCC-CEEEEEe-CCCeEEEEeCCC
Q psy4510 480 PQLP-GTIISTA-NSGFNIFRTISD 502 (812)
Q Consensus 480 p~~~-~~~~~~~-~~~~~~~~~~~~ 502 (812)
|++. .++++.. .+.+.+++..+.
T Consensus 379 pDg~~~lyv~n~~s~~VsVID~~t~ 403 (426)
T 3c75_H 379 QDAEPLLYALSAGTQTLHIYDAATG 403 (426)
T ss_dssp CSSSCEEEEEETTTTEEEEEETTTC
T ss_pred cCCCEEEEEEcCCCCeEEEEECCCC
Confidence 9987 4555553 455667765544
No 224
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.97 E-value=6.9e-08 Score=98.84 Aligned_cols=236 Identities=10% Similarity=-0.007 Sum_probs=144.6
Q ss_pred cCCCCCCeeeeeEcCCCC-cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcE
Q psy4510 219 LGGHTNSAEDLQWSDLKT-ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNI 297 (812)
Q Consensus 219 l~~h~~~V~~l~~s~~~~-~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i 297 (812)
+..........+|+++++ ++++...++.|..|+.. + . ...+..+...+.++++++++ .++++...++.|
T Consensus 40 l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g-------~-~~~~~~~~~~~~gl~~d~dG-~l~v~~~~~~~v 109 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-G-------T-VDVLLDATAFTNGNAVDAQQ-RLVHCEHGRRAI 109 (305)
T ss_dssp EECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-S-------C-EEEEEESCSCEEEEEECTTS-CEEEEETTTTEE
T ss_pred EecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-C-------C-EEEEeCCCCccceeeECCCC-CEEEEECCCCEE
Confidence 334455667889999998 45566678899999873 2 2 34555567788999999998 566665556789
Q ss_pred EEEeCCCCCcceeccccccC-CCCCEEEEEEcCCCCeEEEE----EEC-------------CCeEEEEECCCCCccccee
Q psy4510 298 HIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSPGEKRVLAS----CSV-------------DLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s----~~~-------------dg~i~iwd~~~~~~~~~~~ 359 (812)
.+|+.. +.. ........+ ....++++++.|+|. ++++ |.. .+.|..+|..++.. .
T Consensus 110 ~~~~~~-g~~-~~~~~~~~~~~~~~~~~i~~d~dG~-l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~----~ 182 (305)
T 3dr2_A 110 TRSDAD-GQA-HLLVGRYAGKRLNSPNDLIVARDGA-IWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPL----Q 182 (305)
T ss_dssp EEECTT-SCE-EEEECEETTEECSCCCCEEECTTSC-EEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCC----E
T ss_pred EEECCC-CCE-EEEEeccCCCccCCCCCEEECCCCC-EEEeCcCCCccccccccccccccCCCeEEEEcCCCCcE----E
Confidence 999986 431 111111111 123578899999998 5665 321 25677777653321 1
Q ss_pred ecCCcCCCCeEEEEEcCCCCEEEEEeCC------CcEEEEecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 360 TLPNAHTSDVNVISWNRTEPLIVSGGDD------GCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 360 ~~~~~~~~~v~~l~~~~~~~~l~sg~~d------g~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
.+ . .....+.++|+|+++.|+.+... +.|.+|++.... ......+ ....+....+++.++|. + .+++.
T Consensus 183 ~~-~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~~~~~pdgi~~d~~G~-l-wv~~~ 257 (305)
T 3dr2_A 183 RM-A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASVPDGLPDGFCVDRGGW-L-WSSSG 257 (305)
T ss_dssp EE-E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECCSSSCCCSEEECTTSC-E-EECCS
T ss_pred EE-e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEECCCCCCCeEEECCCCC-E-EEecC
Confidence 22 1 23456889999999977766654 689999986311 0000111 11233456788999874 4 44444
Q ss_pred CCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEE
Q psy4510 433 DDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNI 496 (812)
Q Consensus 433 dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~ 496 (812)
++ |.+|+.... .+...... ..+..++|.|++..+++++. +++..
T Consensus 258 ~g-v~~~~~~g~-----------------~~~~~~~~-~~~~~~~f~~d~~~L~it~~-~~l~~ 301 (305)
T 3dr2_A 258 TG-VCVFDSDGQ-----------------LLGHIPTP-GTASNCTFDQAQQRLFITGG-PCLWM 301 (305)
T ss_dssp SE-EEEECTTSC-----------------EEEEEECS-SCCCEEEECTTSCEEEEEET-TEEEE
T ss_pred Cc-EEEECCCCC-----------------EEEEEECC-CceeEEEEeCCCCEEEEEcC-CeEEE
Confidence 54 999987533 22222222 35888999987655555554 44433
No 225
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.90 E-value=7.1e-08 Score=100.54 Aligned_cols=249 Identities=7% Similarity=-0.073 Sum_probs=150.0
Q ss_pred CceEEEEeCCCCCCeEEEec--CCCcEEEEccCCCCccccc--ccccCCCCCCeeeeeEcCCCCcEEEeeC-----CCce
Q psy4510 177 TEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVD--QKPLGGHTNSAEDLQWSDLKTALQTVDD-----PFQL 247 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~--~dg~v~iwd~~~~~~~~~~--~~~l~~h~~~V~~l~~s~~~~~l~s~~~-----d~~i 247 (812)
..+..++++| +|+++++.. .++.++||.+.++...... .....+|...+..++++++++++++-.. ++.|
T Consensus 17 ~~p~~va~~~-~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTP-DGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECT-TSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECC-CCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 6788999999 999998863 2343666666532211000 0122346678999999999886655433 5789
Q ss_pred EEeeCCCCCCCCCCCCCceEEcC------CCCcEEEEEecCCCCCEEEEEe---CCCcEEEEeCCCCCcceeccc--cc-
Q psy4510 248 AEHNKKRGKGPGIPTPPLFSFSG------HLTEGFAMDWSSTEPGVLATGD---CKRNIHIWTPREAGAWQVDQK--PL- 315 (812)
Q Consensus 248 ~vwd~~~~~~~~~~~~~~~~~~~------h~~~v~~l~~sp~~~~~l~sg~---~dg~i~vwd~~~~~~~~~~~~--~~- 315 (812)
.+||+.++ +.+.++.. +......+++++++...+++.. .++.|.+||+.++..+..... .+
T Consensus 96 ~~~d~~tg-------~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~ 168 (343)
T 2qe8_A 96 VAWDTLNN-------QLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIA 168 (343)
T ss_dssp EEEETTTT-------EEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTS
T ss_pred EEEECCCC-------eEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccc
Confidence 99999875 33333322 2235678999987534455555 578999999987653222110 00
Q ss_pred --------cC--------------CCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCc-----ccceeecC-CcCC
Q psy4510 316 --------VG--------------HTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINT-----KSCMLTLP-NAHT 366 (812)
Q Consensus 316 --------~~--------------h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~-----~~~~~~~~-~~~~ 366 (812)
.+ ....+..|+|+|+++. |+.+...+ .|..++...... ......+. .++.
T Consensus 169 ~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~-ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 247 (343)
T 2qe8_A 169 PEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEW-LYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEK 247 (343)
T ss_dssp CCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCE-EEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEEC
T ss_pred ccccceeECCEEEEeccCCCceeceecccceeEeccCCCE-EEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccC
Confidence 00 0124688999999985 55555544 555555321000 00000000 1233
Q ss_pred CCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEE
Q psy4510 367 SDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALW 439 (812)
Q Consensus 367 ~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iw 439 (812)
.....++++++|+++++...++.|.+||... ++ +..+.. +.....+++|.+++ .++++.+..+.+.+|
T Consensus 248 g~pdgia~d~~G~l~va~~~~~~V~~~d~~~---G~-~~~~~~~~~~~~p~~va~~~~g-~l~v~~~~~~~~~~f 317 (343)
T 2qe8_A 248 PICDGISIDKDHNIYVGDLAHSAIGVITSAD---RA-YKLLVTDEKLSWTDSFNFGSDG-YLYFDCNQLHHSAPL 317 (343)
T ss_dssp CSCSCEEECTTCCEEEEEGGGTEEEEEETTT---TE-EEEEEECGGGSCEEEEEECTTS-CEEEEECCGGGSGGG
T ss_pred CCCceEEECCCCCEEEEccCCCeEEEEECCC---CC-EEEEEECCceecCCeeEECCCC-cEEEEeCcccccccc
Confidence 4566789999999999998899999999832 22 222221 24568899999876 566666544444333
No 226
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.84 E-value=4.1e-07 Score=103.76 Aligned_cols=194 Identities=12% Similarity=0.149 Sum_probs=111.9
Q ss_pred CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc----------E-EEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 235 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE----------G-FAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 235 ~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~----------v-~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
+..|+.++.++.|..+|..+| +.+.++..+... + ..+.. .+ .++++++.|+.|..+|..
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG-------~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~-g~v~v~~~dg~l~AlDa~ 139 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDG-------RLIWKYDPQSDRHRAGEACCDAVNRGVAV--WK-GKVYVGVLDGRLEAIDAK 139 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTC-------CEEEEECCCCCGGGGGGCTTCSCCCCCEE--ET-TEEEEECTTSEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEECCCC-------ceeEEEcCCCCccccccccccCCCCccEE--EC-CEEEEEccCCEEEEEECC
Confidence 456666777788888888876 444444332210 0 11122 23 688889999999999999
Q ss_pred CCCc-ceeccccccCCCCCEEEEEEcC---CCCeEEEEEE-----CCCeEEEEECCCCCcccceeecCC-----------
Q psy4510 304 EAGA-WQVDQKPLVGHTNSVEDLQWSP---GEKRVLASCS-----VDLSIRIWDTRVINTKSCMLTLPN----------- 363 (812)
Q Consensus 304 ~~~~-~~~~~~~~~~h~~~v~~~~~~p---~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~~~~----------- 363 (812)
+++. |..... .+......+..+| ++. +++.++ .+|.|+.||.++++..........
T Consensus 140 TG~~~W~~~~~---~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~ 215 (689)
T 1yiq_A 140 TGQRAWSVDTR---ADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGM 215 (689)
T ss_dssp TCCEEEEEECC---SCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHH
T ss_pred CCCEeeeecCc---CCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCcccccccccc
Confidence 8874 222111 0100000111111 343 444332 378999999986654322221100
Q ss_pred ----------------cCCCCeEEEEEcCCCCEEEEEeCCCc-------------------EEEEecCCCCCCCceEEcc
Q psy4510 364 ----------------AHTSDVNVISWNRTEPLIVSGGDDGC-------------------IHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 364 ----------------~~~~~v~~l~~~~~~~~l~sg~~dg~-------------------i~iwd~~~~~~~~~~~~~~ 408 (812)
.+......++++|.+.+++.++.++. |..+|.+ +++.+..++
T Consensus 216 ~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~---TG~~~W~~~ 292 (689)
T 1yiq_A 216 EIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNAD---TGEYVWHYQ 292 (689)
T ss_dssp HHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETT---TCCEEEEEE
T ss_pred cccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEcc---CCceeEeee
Confidence 11111235788888888888887764 9999998 577777665
Q ss_pred c--CC-------CCEEEEEEccCCC--cEEEEEECCCCEEEEEcCCCC
Q psy4510 409 H--HT-------APVTTVEWHPTES--STFASGGADDQIALWDLAVER 445 (812)
Q Consensus 409 ~--h~-------~~v~~v~~~p~~~--~~l~s~~~dg~v~iwd~~~~~ 445 (812)
. |. .++.-.....++. ..++.++.+|.++++|..+++
T Consensus 293 ~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~ 340 (689)
T 1yiq_A 293 TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGE 340 (689)
T ss_dssp SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCC
T ss_pred cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCC
Confidence 4 21 1222222222331 278889999999999998884
No 227
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.82 E-value=6.6e-08 Score=100.26 Aligned_cols=223 Identities=7% Similarity=-0.086 Sum_probs=133.0
Q ss_pred cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee----------CCCceEEeeCCCCCCCCCCCCCceEEc
Q psy4510 200 NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD----------DPFQLAEHNKKRGKGPGIPTPPLFSFS 269 (812)
Q Consensus 200 ~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~----------~d~~i~vwd~~~~~~~~~~~~~~~~~~ 269 (812)
+|.+.|..+.+ .+.++..-..+ .++++|+++++..+. .++.|.+||..++ +.+.++.
T Consensus 47 ~vsvID~~t~~----v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~-------~vv~~I~ 113 (368)
T 1mda_H 47 ENWVSCAGCGV----TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTF-------LPIADIE 113 (368)
T ss_dssp EEEEEETTTTE----EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTC-------CEEEEEE
T ss_pred eEEEEECCCCe----EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCC-------CEEEEEE
Confidence 78899998876 34444433445 799999999998886 3688999999985 6677764
Q ss_pred CC-------CCcEEEEEecCCCCCEEEEEeC--CCcEEE--EeCCCCCcceeccc----cccCC---------CCCEEEE
Q psy4510 270 GH-------LTEGFAMDWSSTEPGVLATGDC--KRNIHI--WTPREAGAWQVDQK----PLVGH---------TNSVEDL 325 (812)
Q Consensus 270 ~h-------~~~v~~l~~sp~~~~~l~sg~~--dg~i~v--wd~~~~~~~~~~~~----~~~~h---------~~~v~~~ 325 (812)
.. ......++++|++ ++|+++.. ...|.+ +|+.+-. .+... ....+ .+.+..+
T Consensus 114 v~~~~~~~~g~~P~~ia~SpDG-k~lyVan~~~~~~v~V~~iD~~tv~--~i~v~~~~~~~p~g~~~~~~~~~dg~~~~v 190 (368)
T 1mda_H 114 LPDAPRFSVGPRVHIIGNCASS-ACLLFFLFGSSAAAGLSVPGASDDQ--LTKSASCFHIHPGAAATHYLGSCPASLAAS 190 (368)
T ss_dssp ETTSCSCCBSCCTTSEEECTTS-SCEEEEECSSSCEEEEEETTTEEEE--EEECSSCCCCEEEETTEEECCCCTTSCEEE
T ss_pred CCCccccccCCCcceEEEcCCC-CEEEEEccCCCCeEEEEEEchhhce--EEECCCceEEccCCCeEEEEEcCCCCEEEE
Confidence 32 1235689999999 56666653 457888 8886511 00000 00000 0000000
Q ss_pred E--------------------------EcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC---------cCCCCeE
Q psy4510 326 Q--------------------------WSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN---------AHTSDVN 370 (812)
Q Consensus 326 ~--------------------------~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~---------~~~~~v~ 370 (812)
. ..+++.. ++..+. +.|.+.|+..... ..+..+.. .......
T Consensus 191 d~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~-~~~vs~-~~V~viD~~~~~~-~v~~~~~~~~~~~~~~~~~p~g~~ 267 (368)
T 1mda_H 191 DLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGM-LVWAVA-SSILQGDIPAAGA-TMKAAIDGNESGRKADNFRSAGFQ 267 (368)
T ss_dssp ECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTE-EEECBS-SCCEEEECCSSCC-EEECCCCSSCTHHHHTTEEECSSS
T ss_pred ECccccccCCeEEEEeeeeeeCCCCccccccCCE-EEEEcC-CEEEEEECCCCcc-eEEEEEEeccccccccccccCcce
Confidence 0 0222332 222223 5666666642110 01111100 0111122
Q ss_pred EEEEcCCCCEEEEEeC---------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CCCCEEEEE
Q psy4510 371 VISWNRTEPLIVSGGD---------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG-ADDQIALWD 440 (812)
Q Consensus 371 ~l~~~~~~~~l~sg~~---------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~dg~v~iwd 440 (812)
.++++|+++.++.+.. ++.+.++|+. +.+.+..+.... ...+|.|+|++..++++.. .++.|.++|
T Consensus 268 ~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~---t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID 343 (368)
T 1mda_H 268 MVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTAS---VGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYD 343 (368)
T ss_dssp CEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESS---SCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEE
T ss_pred eeEEcCCCCEEEEEeccccCcccccCCCEEEEECC---CCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEE
Confidence 2689999986665432 2356699998 456666665433 5789999999876788888 699999999
Q ss_pred cCCCC
Q psy4510 441 LAVER 445 (812)
Q Consensus 441 ~~~~~ 445 (812)
+.+.+
T Consensus 344 ~~t~k 348 (368)
T 1mda_H 344 AASDQ 348 (368)
T ss_dssp SSSCE
T ss_pred CCCCc
Confidence 99884
No 228
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.79 E-value=6.4e-08 Score=100.34 Aligned_cols=129 Identities=11% Similarity=-0.018 Sum_probs=85.7
Q ss_pred cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE---------CCCeEEEEECCCCCcccceeecCCc--
Q psy4510 296 NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS---------VDLSIRIWDTRVINTKSCMLTLPNA-- 364 (812)
Q Consensus 296 ~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~---------~dg~i~iwd~~~~~~~~~~~~~~~~-- 364 (812)
+|.+.|..+.+ ....+.....+ .+.++|+++.++++.+ .++.|.+||+.+... +.++..+
T Consensus 47 ~vsvID~~t~~----v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~v---v~~I~v~~~ 117 (368)
T 1mda_H 47 ENWVSCAGCGV----TLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLP---IADIELPDA 117 (368)
T ss_dssp EEEEEETTTTE----EEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCE---EEEEEETTS
T ss_pred eEEEEECCCCe----EEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCE---EEEEECCCc
Confidence 78899998876 33344333334 7999999997555543 478999999996443 4443211
Q ss_pred C----CCCeEEEEEcCCCCEEEEEeC--CCcEEE--EecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCE
Q psy4510 365 H----TSDVNVISWNRTEPLIVSGGD--DGCIHV--WDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 365 ~----~~~v~~l~~~~~~~~l~sg~~--dg~i~i--wd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
. ......++++|+|++++++.. ...|.+ +|+.. +..+..- +. +...|++...+++.+.|+++
T Consensus 118 ~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t------v~~i~v~-~~---~~~~p~g~~~~~~~~~dg~~ 187 (368)
T 1mda_H 118 PRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD------DQLTKSA-SC---FHIHPGAAATHYLGSCPASL 187 (368)
T ss_dssp CSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE------EEEEECS-SC---CCCEEEETTEEECCCCTTSC
T ss_pred cccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh------ceEEECC-Cc---eEEccCCCeEEEEEcCCCCE
Confidence 0 123567899999998887764 467888 88863 3443321 11 22456666677777889999
Q ss_pred EEEEcCC
Q psy4510 437 ALWDLAV 443 (812)
Q Consensus 437 ~iwd~~~ 443 (812)
.+.|+..
T Consensus 188 ~~vd~~~ 194 (368)
T 1mda_H 188 AASDLAA 194 (368)
T ss_dssp EEEECCS
T ss_pred EEEECcc
Confidence 8999876
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.78 E-value=2.5e-09 Score=112.62 Aligned_cols=201 Identities=14% Similarity=0.086 Sum_probs=108.3
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
++.+|++++.||.|+.||..+++. +..+.. +.+.+..+..+++.+++++.++.|+.||..++ +.+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~----~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG-------~~~w~ 74 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSI----KWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNN-------EGLTK 74 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCE----EEEEEC--CCSCCCC-----CCEEECTTTCCEEEC------------CCSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCE----EEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCC-------ceeee
Confidence 678899999999999999998873 333333 45666667778888888889999999999886 44444
Q ss_pred EcCCCCc-EE-EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEE
Q psy4510 268 FSGHLTE-GF-AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIR 345 (812)
Q Consensus 268 ~~~h~~~-v~-~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 345 (812)
+..+... +. +..+. .+ +.+++|+.++.|+.||..+++. ...+..+. ...++|++. .+++++.|+.|+
T Consensus 75 ~~~~~~~~~~~sp~~~-~~-~~v~~g~~dg~v~a~D~~tG~~----~w~~~~~~----~~~~~p~~~-~v~~~~~dg~v~ 143 (369)
T 2hz6_A 75 LPFTIPELVQASPCRS-SD-GILYMGKKQDIWYVIDLLTGEK----QQTLSSAF----ADSLSPSTS-LLYLGRTEYTIT 143 (369)
T ss_dssp CSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC-------------------------------EEEEEEEEEEE
T ss_pred eeccCccccccCceEe-cC-CEEEEEeCCCEEEEEECCCCcE----EEEecCCC----cccccccCC-EEEEEecCCEEE
Confidence 4333211 10 00111 23 5778888899999999998873 33333332 234566666 588888999999
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEE-EEEcc
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTT-VEWHP 421 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~-v~~~p 421 (812)
.||.+++....... . .. ....++..+. ..+++++.+|.|..||.+ +++.+..+.. ..++.. ..+++
T Consensus 144 a~d~~tG~~~W~~~-~-~~----~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~---tG~~~W~~~~-~~pv~~~~~~~~ 213 (369)
T 2hz6_A 144 MYDTKTRELRWNAT-Y-FD----YAASLPEDDVDYKMSHFVSNGDGLVVTVDSE---SGDVLWIQNY-ASPVVAFYVWQR 213 (369)
T ss_dssp CCCSSSSSCCCEEE-E-EE----ECCBCCCCCTTCCCCEEEEETSCEEEEECTT---TCCEEEEEEC-SSCEEEEEECTT
T ss_pred EEECCCCCEEEeEe-c-cc----ccCccccCCccccceEEEECCCCEEEEEECC---CCcEEEEecC-CCceEEEEEecC
Confidence 99998654322211 1 01 1222333322 457778899999999998 4666666653 344443 33344
Q ss_pred C
Q psy4510 422 T 422 (812)
Q Consensus 422 ~ 422 (812)
+
T Consensus 214 d 214 (369)
T 2hz6_A 214 E 214 (369)
T ss_dssp S
T ss_pred C
Confidence 4
No 230
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.75 E-value=5.5e-07 Score=93.74 Aligned_cols=243 Identities=8% Similarity=-0.035 Sum_probs=144.3
Q ss_pred CCeeeeeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-----CCc
Q psy4510 224 NSAEDLQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-----KRN 296 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-----dg~ 296 (812)
.....++++++|+.+++.. .++.++||.+.++.....+.. .....+|...+.++++.+++ .++++... ++.
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~-~~~~~~~~~~p~gv~~d~~g-~L~v~D~g~~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQ-SGNAIITFDTVLGIKSDGNG-IVWMLDNGNQSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCC-CSSCCCCCSCEEEEEECSSS-EEEEEECHHHHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCc-ccCcccceeEeeEEEEcCCC-cEEEEcCCCCcCCCCe
Confidence 5788999999999888864 234366666653210000000 01122456789999999997 45554432 578
Q ss_pred EEEEeCCCCCcceecc--ccccCCCCCEEEEEEcCCCCeEEEEEE---CCCeEEEEECCCCCcccceeecCCcC------
Q psy4510 297 IHIWTPREAGAWQVDQ--KPLVGHTNSVEDLQWSPGEKRVLASCS---VDLSIRIWDTRVINTKSCMLTLPNAH------ 365 (812)
Q Consensus 297 i~vwd~~~~~~~~~~~--~~~~~h~~~v~~~~~~p~~~~~l~s~~---~dg~i~iwd~~~~~~~~~~~~~~~~~------ 365 (812)
|.+||+.+++...... .....+...+.+++++|++..++++.. .++.|.+||+.++... ..+ ..|
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~---r~~-~~~~~~~~~ 170 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAA---RVL-QGYPGIAPE 170 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEE---EEC-TTCTTTSCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEE---EEe-cCCCccccc
Confidence 9999998775211110 011123346789999987665667766 6889999998743221 111 110
Q ss_pred -----------------------CCCeEEEEEcCCCCEEEEEeCCC-cEEEEecCCCCCCC--------ceEEcccCCCC
Q psy4510 366 -----------------------TSDVNVISWNRTEPLIVSGGDDG-CIHVWDLRRFKKGS--------SVATFKHHTAP 413 (812)
Q Consensus 366 -----------------------~~~v~~l~~~~~~~~l~sg~~dg-~i~iwd~~~~~~~~--------~~~~~~~h~~~ 413 (812)
...++.|+|+|+++.|+.+...+ .|..++........ .+. ..++.+.
T Consensus 171 ~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~g~~g~ 249 (343)
T 2qe8_A 171 DIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE-RYSEKPI 249 (343)
T ss_dssp SCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE-EEEECCS
T ss_pred ccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE-ecccCCC
Confidence 12468999999999888777665 45555432111110 011 1133445
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEe
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTA 490 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~ 490 (812)
...+++++++ .++++...++.|.+||...++. ..+.....-..+..+++.+++. ++++..
T Consensus 250 pdgia~d~~G-~l~va~~~~~~V~~~d~~~G~~---------------~~~~~~~~~~~p~~va~~~~g~-l~v~~~ 309 (343)
T 2qe8_A 250 CDGISIDKDH-NIYVGDLAHSAIGVITSADRAY---------------KLLVTDEKLSWTDSFNFGSDGY-LYFDCN 309 (343)
T ss_dssp CSCEEECTTC-CEEEEEGGGTEEEEEETTTTEE---------------EEEEECGGGSCEEEEEECTTSC-EEEEEC
T ss_pred CceEEECCCC-CEEEEccCCCeEEEEECCCCCE---------------EEEEECCceecCCeeEECCCCc-EEEEeC
Confidence 5678999986 6888888889999999843311 1111111123578899998753 444443
No 231
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.63 E-value=1.3e-06 Score=90.43 Aligned_cols=286 Identities=10% Similarity=0.005 Sum_probs=161.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEE
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF 268 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~ 268 (812)
+..|..++.++.|..|| .+++. ......+...+.++...+++... .++.+ +..+|. ++ +.+..+
T Consensus 30 ~g~l~v~t~~~~l~~~d-~~g~~----~~~~~~~~~~~~~~~~~~~g~l~-v~t~~--l~~~d~-~g-------~~~~~~ 93 (330)
T 3hxj_A 30 NGTIYLGSSNKNLYAIN-TDGSV----KWFFKSGEIIECRPSIGKDGTIY-FGSDK--VYAINP-DG-------TEKWRF 93 (330)
T ss_dssp TSCEECSSTTTTTEEEC-TTSCE----EESSCGGGEEEECCEETTTTEEC-CSSCE--EEEECC-CG-------GGGGGS
T ss_pred CCeEEEEcCCCEEEEEC-CCCcE----EEEEecCCCcccceEEecCCcEE-EecCc--EEEECC-CC-------cEEEEE
Confidence 34566677788899999 66552 22233344456778887777644 34443 777875 33 222222
Q ss_pred cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEE
Q psy4510 269 SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWD 348 (812)
Q Consensus 269 ~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd 348 (812)
............. + +.|..++.++.|..+|.. +.. ......+...+.++...+++. +..++.++.|..+|
T Consensus 94 ~~~~~~~~~~~~~--~-~~l~v~t~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~~~~g~--l~vgt~~~~l~~~d 163 (330)
T 3hxj_A 94 DTKKAIVSDFTIF--E-DILYVTSMDGHLYAINTD-GTE----KWRFKTKKAIYATPIVSEDGT--IYVGSNDNYLYAIN 163 (330)
T ss_dssp CC-----CCEEEE--T-TEEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTSC--EEEECTTSEEEEEC
T ss_pred ECCCCcccCceEE--C-CEEEEEecCCEEEEEcCC-CCE----EEEEcCCCceeeeeEEcCCCE--EEEEcCCCEEEEEC
Confidence 2222222222233 3 678888888999999988 542 222223344566677777776 66677889999999
Q ss_pred CCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEE
Q psy4510 349 TRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFA 428 (812)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~ 428 (812)
.. +.. +... ......+.++...+++.+++ ++ +.|..+| . .+..+..+......+.++...+++ .|.
T Consensus 164 ~~-g~~---~~~~-~~~~~~~~~~~~d~~g~l~v-~t--~~l~~~d-~---~g~~~~~~~~~~~~~~~~~~~~~g--~l~ 229 (330)
T 3hxj_A 164 PD-GTE---KWRF-KTNDAITSAASIGKDGTIYF-GS--DKVYAIN-P---DGTEKWNFYAGYWTVTRPAISEDG--TIY 229 (330)
T ss_dssp TT-SCE---EEEE-ECSSCCCSCCEECTTCCEEE-ES--SSEEEEC-T---TSCEEEEECCSSCCCSCCEECTTS--CEE
T ss_pred CC-CCE---eEEE-ecCCCceeeeEEcCCCEEEE-Ee--CEEEEEC-C---CCcEEEEEccCCcceeceEECCCC--eEE
Confidence 86 322 2222 22344566777777776444 44 7899999 4 455666666555678888888775 466
Q ss_pred EEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccE
Q psy4510 429 SGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLL 508 (812)
Q Consensus 429 s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 508 (812)
.++.++.|..+|.... .+.........+..+...+++ .+.+++..+++..++. .. ....
T Consensus 230 v~t~~~gl~~~~~~g~-----------------~~~~~~~~~~~~~~~~~~~~g-~l~v~t~~ggl~~~d~-~g--~~~~ 288 (330)
T 3hxj_A 230 VTSLDGHLYAINPDGT-----------------EKWRFKTGKRIESSPVIGNTD-TIYFGSYDGHLYAINP-DG--TEKW 288 (330)
T ss_dssp EEETTTEEEEECTTSC-----------------EEEEEECSSCCCSCCEECTTS-CEEEECTTCEEEEECT-TS--CEEE
T ss_pred EEcCCCeEEEECCCCC-----------------EeEEeeCCCCccccceEcCCC-eEEEecCCCCEEEECC-CC--cEEE
Confidence 6777788888874322 121222222223344555443 3455444446666642 21 1222
Q ss_pred EeecCCCCeeEEEEcCCCCCeEEEeeCCC
Q psy4510 509 FIHLGQKEIKELHWHPQLPGTIISTANSG 537 (812)
Q Consensus 509 ~~~~~~~~i~~~~~~p~~~~~~i~~~~~~ 537 (812)
........+.++...++ +.+.....++
T Consensus 289 ~~~~~~~~~~~~~~d~~--g~l~~gt~~G 315 (330)
T 3hxj_A 289 NFETGSWIIATPVIDEN--GTIYFGTRNG 315 (330)
T ss_dssp EEECSSCCCSCCEECTT--CCEEEECTTS
T ss_pred EEEcCCccccceEEcCC--CEEEEEcCCC
Confidence 22233445666666666 4455554444
No 232
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.62 E-value=4e-05 Score=76.33 Aligned_cols=233 Identities=8% Similarity=-0.023 Sum_probs=139.3
Q ss_pred CeEEEecCCCcEEEEccCCCCcccccc-cccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceE
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQVDQ-KPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFS 267 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~~~~-~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~ 267 (812)
.+|..+.. +.|+.+++.......... ..+......+..++|++++..|..+. ..+.|.+++.... .....
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~-------~~~~~ 73 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGG-------EPTTI 73 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSC-------CCEEE
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCC-------CcEEE
Confidence 34444443 478888887654211000 11111234567999999877666555 5778999998763 22222
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC--CCeEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV--DLSIR 345 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~ 345 (812)
+........++++.|++..++++-...+.|.++++...... ............++++|++..++++... .+.|.
T Consensus 74 ~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~----~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~ 149 (267)
T 1npe_A 74 IRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR----VLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIE 149 (267)
T ss_dssp ECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEE
T ss_pred EECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE----EEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEE
Confidence 32223567899999976345555556789999998754311 1111122467899999977755555543 47888
Q ss_pred EEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCC
Q psy4510 346 IWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTES 424 (812)
Q Consensus 346 iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~ 424 (812)
.+++.... . ..+........+.+++++++..| ++-...+.|.++|+.. ......+. .......++.. +.
T Consensus 150 ~~~~dg~~-~---~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g---~~~~~~~~-~~~~P~gi~~d--~~ 219 (267)
T 1npe_A 150 TSHMDGTN-R---RILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ---PGRRKVLE-GLQYPFAVTSY--GK 219 (267)
T ss_dssp EEETTSCC-C---EEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE---EEEEEEEE-CCCSEEEEEEE--TT
T ss_pred EEecCCCC-c---EEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC---CceEEEec-CCCCceEEEEe--CC
Confidence 88876321 1 11111223467899999987644 5555668999999863 11122222 22334566654 44
Q ss_pred cEEEEEECCCCEEEEEcCCC
Q psy4510 425 STFASGGADDQIALWDLAVE 444 (812)
Q Consensus 425 ~~l~s~~~dg~v~iwd~~~~ 444 (812)
.++++....+.|..+|..+.
T Consensus 220 ~lyva~~~~~~v~~~d~~~g 239 (267)
T 1npe_A 220 NLYYTDWKTNSVIAMDLAIS 239 (267)
T ss_dssp EEEEEETTTTEEEEEETTTT
T ss_pred EEEEEECCCCeEEEEeCCCC
Confidence 45555555688999998866
No 233
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.61 E-value=1.6e-06 Score=90.13 Aligned_cols=233 Identities=13% Similarity=0.045 Sum_probs=140.9
Q ss_pred EeC--CCCCCeE-EEecCCCcEEEEccCCCCcccccccccC------CC-CCCeeeeeEcCCCCcEEEeeCC------Cc
Q psy4510 183 DWS--STEPGVL-ATGDCKRNIHIWTPREAGAWQVDQKPLG------GH-TNSAEDLQWSDLKTALQTVDDP------FQ 246 (812)
Q Consensus 183 ~~s--p~~~~~l-at~~~dg~v~iwd~~~~~~~~~~~~~l~------~h-~~~V~~l~~s~~~~~l~s~~~d------~~ 246 (812)
.++ + ++++| ++|..+++|+|+|+.+........+++. .. ...-..+..+|+| .++++..+ +.
T Consensus 88 ~~~~~~-~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~ 165 (462)
T 2ece_A 88 NGKPNI-ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGG 165 (462)
T ss_dssp TCCTTC-CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCE
T ss_pred ccCCCc-cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCe
Confidence 446 6 66655 5677889999999975422111222221 11 1133456778999 66665544 78
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCC---CcEEEEEecCCCCCEEEEEe-------------------CCCcEEEEeCCC
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHL---TEGFAMDWSSTEPGVLATGD-------------------CKRNIHIWTPRE 304 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~---~~v~~l~~sp~~~~~l~sg~-------------------~dg~i~vwd~~~ 304 (812)
+.+.|..+. +.+.++.... .-.+.+.|+|++ +.+++.. ...+|.+||+.+
T Consensus 166 v~vlD~~T~-------~v~~~~~~~~~~~~~~Yd~~~~p~~-~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~ 237 (462)
T 2ece_A 166 ILMLDHYSF-------EPLGKWEIDRGDQYLAYDFWWNLPN-EVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRK 237 (462)
T ss_dssp EEEECTTTC-------CEEEECCSBCTTCCCCCCEEEETTT-TEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTT
T ss_pred EEEEECCCC-------eEEEEEccCCCCccccceEEECCCC-CEEEEccCcCccccccccchhhhhhccCCEEEEEECCC
Confidence 999998874 5555554221 234568899998 6777774 368999999987
Q ss_pred CCcceeccccccC--CCCCEEEEEE--cCCCCeEEEEEE-----CCCeEEEEECCCCCcccceee--cCC----------
Q psy4510 305 AGAWQVDQKPLVG--HTNSVEDLQW--SPGEKRVLASCS-----VDLSIRIWDTRVINTKSCMLT--LPN---------- 363 (812)
Q Consensus 305 ~~~~~~~~~~~~~--h~~~v~~~~~--~p~~~~~l~s~~-----~dg~i~iwd~~~~~~~~~~~~--~~~---------- 363 (812)
++ ....+.- .......+.| +|+++..++++- .+++|.+|....+ ....... +..
T Consensus 238 ~k----~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g-~~~~~~vIdi~~~~v~~~lp~~ 312 (462)
T 2ece_A 238 RK----RIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG-KWNAEKVIEIPAEPLEGNLPEI 312 (462)
T ss_dssp TE----EEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT-EEEEEEEEEECCEECCSSCCGG
T ss_pred Cc----EeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC-ceeEEEEEeCCCcccccccccc
Confidence 54 2222221 1234456666 999998777777 7888877655421 1110110 000
Q ss_pred -----cCCCCeEEEEEcCCCCEEEEEeC-CCcEEEEecCCCCCCCceEEcccCC--------------CCEEEEEEccCC
Q psy4510 364 -----AHTSDVNVISWNRTEPLIVSGGD-DGCIHVWDLRRFKKGSSVATFKHHT--------------APVTTVEWHPTE 423 (812)
Q Consensus 364 -----~~~~~v~~l~~~~~~~~l~sg~~-dg~i~iwd~~~~~~~~~~~~~~~h~--------------~~v~~v~~~p~~ 423 (812)
+-......|.++++|++|+++.. .+.|.+||+......+.+..+.... +.-..++++|+|
T Consensus 313 ~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDG 392 (462)
T 2ece_A 313 LKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDG 392 (462)
T ss_dssp GGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTS
T ss_pred ccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCC
Confidence 00245778999999997766654 6899999996432334444443220 124678999998
Q ss_pred CcEEEEEE
Q psy4510 424 SSTFASGG 431 (812)
Q Consensus 424 ~~~l~s~~ 431 (812)
. +|+++.
T Consensus 393 k-~LyVaN 399 (462)
T 2ece_A 393 R-RVYVTN 399 (462)
T ss_dssp S-EEEEEC
T ss_pred C-EEEEEc
Confidence 5 555544
No 234
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.55 E-value=0.00011 Score=72.93 Aligned_cols=193 Identities=7% Similarity=-0.060 Sum_probs=117.6
Q ss_pred cEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc
Q psy4510 237 ALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV 316 (812)
Q Consensus 237 ~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~ 316 (812)
+|..+.. +.|+.+++........ .....+........+++|++++..++++-...+.|..+++..... .....
T Consensus 3 ~l~~~~~-~~I~~~~~~g~~~~~~--~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~----~~~~~ 75 (267)
T 1npe_A 3 HLLFAQT-GKIERLPLERNTMKKT--EAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEP----TTIIR 75 (267)
T ss_dssp EEEEEEE-EEEEEEEESSSCBCGG--GCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCC----EEEEC
T ss_pred EEEEEcC-CeEEEEEecCcccccc--cceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCc----EEEEE
Confidence 3444443 4678888765310000 001112222345789999997734555555678999999876542 11112
Q ss_pred CCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC---CCcEEEE
Q psy4510 317 GHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD---DGCIHVW 393 (812)
Q Consensus 317 ~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~---dg~i~iw 393 (812)
........+++.|++..++++....+.|.++++.... ...+ . .......+.++++|++..|+.+.. .+.|..+
T Consensus 76 ~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~~~--~-~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~ 151 (267)
T 1npe_A 76 QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RRVL--F-DTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETS 151 (267)
T ss_dssp TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEE--E-CSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEE
T ss_pred CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EEEE--E-ECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEE
Confidence 2224678999999877677777778899999986321 1111 1 122245789999997654444443 4688888
Q ss_pred ecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 394 DLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 394 d~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
++.. .....+ .........++++|++..++++-...+.|.++|+...
T Consensus 152 ~~dg----~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~ 199 (267)
T 1npe_A 152 HMDG----TNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP 199 (267)
T ss_dssp ETTS----CCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE
T ss_pred ecCC----CCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC
Confidence 8752 222222 1223457899999987656666666789999998754
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.54 E-value=2.9e-06 Score=87.73 Aligned_cols=261 Identities=11% Similarity=-0.009 Sum_probs=151.5
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.+.++...+ ++. |..++.+ |..+|. +++ ....+..........++. +..|..++.++.+..++.. +
T Consensus 61 ~~~~~~~~~-~g~-l~v~t~~--l~~~d~-~g~----~~~~~~~~~~~~~~~~~~--~~~l~v~t~~~~l~~~d~~-g-- 126 (330)
T 3hxj_A 61 IECRPSIGK-DGT-IYFGSDK--VYAINP-DGT----EKWRFDTKKAIVSDFTIF--EDILYVTSMDGHLYAINTD-G-- 126 (330)
T ss_dssp EEECCEETT-TTE-ECCSSCE--EEEECC-CGG----GGGGSCC-----CCEEEE--TTEEEEECTTSEEEEECTT-S--
T ss_pred cccceEEec-CCc-EEEecCc--EEEECC-CCc----EEEEEECCCCcccCceEE--CCEEEEEecCCEEEEEcCC-C--
Confidence 345566655 555 4445444 888886 333 222222222233334443 5567778888999999987 4
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
+.......+...+.++...+++ .|..|+.++.|..+|.. +.. ...+......+.++...+++. ++ .
T Consensus 127 -----~~~~~~~~~~~~~~~~~~~~~g--~l~vgt~~~~l~~~d~~-g~~----~~~~~~~~~~~~~~~~d~~g~-l~-v 192 (330)
T 3hxj_A 127 -----TEKWRFKTKKAIYATPIVSEDG--TIYVGSNDNYLYAINPD-GTE----KWRFKTNDAITSAASIGKDGT-IY-F 192 (330)
T ss_dssp -----CEEEEEECSSCCCSCCEECTTS--CEEEECTTSEEEEECTT-SCE----EEEEECSSCCCSCCEECTTCC-EE-E
T ss_pred -----CEEEEEcCCCceeeeeEEcCCC--EEEEEcCCCEEEEECCC-CCE----eEEEecCCCceeeeEEcCCCE-EE-E
Confidence 3444454444555666666665 56778888999999988 542 222223345677777877776 34 4
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 417 (812)
++ +.|..+| .++ ..+... ......+.++...+++. |..++.++.|..+|. .+..+..+......+.++
T Consensus 193 ~t--~~l~~~d-~~g---~~~~~~-~~~~~~~~~~~~~~~g~-l~v~t~~~gl~~~~~----~g~~~~~~~~~~~~~~~~ 260 (330)
T 3hxj_A 193 GS--DKVYAIN-PDG---TEKWNF-YAGYWTVTRPAISEDGT-IYVTSLDGHLYAINP----DGTEKWRFKTGKRIESSP 260 (330)
T ss_dssp ES--SSEEEEC-TTS---CEEEEE-CCSSCCCSCCEECTTSC-EEEEETTTEEEEECT----TSCEEEEEECSSCCCSCC
T ss_pred Ee--CEEEEEC-CCC---cEEEEE-ccCCcceeceEECCCCe-EEEEcCCCeEEEECC----CCCEeEEeeCCCCccccc
Confidence 44 8899999 432 223333 23345678888888775 455666778888875 345555555444444455
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEE
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIF 497 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~ 497 (812)
...+++ .|..++.+|.|..+|. ..+ ...........+.++...+++ .+..++.+|...+
T Consensus 261 ~~~~~g--~l~v~t~~ggl~~~d~-~g~----------------~~~~~~~~~~~~~~~~~d~~g--~l~~gt~~G~~~~ 319 (330)
T 3hxj_A 261 VIGNTD--TIYFGSYDGHLYAINP-DGT----------------EKWNFETGSWIIATPVIDENG--TIYFGTRNGKFYA 319 (330)
T ss_dssp EECTTS--CEEEECTTCEEEEECT-TSC----------------EEEEEECSSCCCSCCEECTTC--CEEEECTTSCEEE
T ss_pred eEcCCC--eEEEecCCCCEEEECC-CCc----------------EEEEEEcCCccccceEEcCCC--EEEEEcCCCeEEE
Confidence 565554 5777888888999985 332 122222233456666666663 3444555555544
Q ss_pred Ee
Q psy4510 498 RT 499 (812)
Q Consensus 498 ~~ 499 (812)
..
T Consensus 320 ~~ 321 (330)
T 3hxj_A 320 LF 321 (330)
T ss_dssp EE
T ss_pred Ee
Confidence 43
No 236
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.53 E-value=0.0028 Score=70.83 Aligned_cols=200 Identities=11% Similarity=-0.019 Sum_probs=118.2
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
..+.+++|++.++.+..+-...+.|..++++.... ....+..--.....|++.+.+..|..+. ..+.|.+.+++..
T Consensus 40 ~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~---~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~ 116 (619)
T 3s94_A 40 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTES---VQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 116 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCc---eEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCC
Confidence 45788999994555555666678898888876431 1112222234678999999777666554 5788999998763
Q ss_pred CCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
....+ ........+|++.|.+ +.|...+. .+.|...++...... ......-...+.|++.+.++
T Consensus 117 --------~~~~l~~~~l~~P~~Iavdp~~-g~ly~tD~g~~~~I~r~~~dG~~~~----~l~~~~~~~P~Glald~~~~ 183 (619)
T 3s94_A 117 --------LRKVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSRF----IIINSEIYWPNGLTLDYEEQ 183 (619)
T ss_dssp --------SCEEEECSSCSCCCCEEEETTT-TEEEEEECSSSCEEEEEETTSCSCE----EEECSSCSSEEEEEEETTTT
T ss_pred --------CEEEEEeCCCCCCceEEEecCC-CeEEEeccCCCCEEEEEECCCCceE----EEEeCCCCCCcEEEEEccCC
Confidence 22222 2344556789999976 45554443 356776776644321 11112334678999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.++++-...+.|...|+....... +. .........|++..+ .++++-...+.|...|..+
T Consensus 184 ~LY~aD~~~~~I~~~~~dG~~~~~-~~---~~~~~~P~gi~~~~~-~ly~td~~~~~V~~~d~~t 243 (619)
T 3s94_A 184 KLYWADAKLNFIHKSNLDGTNRQA-VV---KGSLPHPFALTLFED-ILYWTDWSTHSILACNKYT 243 (619)
T ss_dssp EEEEEETTTCCEEEESSSCCEEC-------------CCCEEESSS-EEEEECTTTCSEEEEESSS
T ss_pred EEEEEeCCCCeEEEecCCCCccEE-EE---eCCCCCceEEEEeCC-EEEEecCCCCEEEEEECCC
Confidence 777776777889998886422211 11 111122245666544 4555555667788888753
No 237
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.52 E-value=6.8e-06 Score=93.70 Aligned_cols=239 Identities=11% Similarity=0.057 Sum_probs=138.5
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcC---CCCcEEEee------CCCceEEeeCCCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSD---LKTALQTVD------DPFQLAEHNKKRGKGP 258 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~---~~~~l~s~~------~d~~i~vwd~~~~~~~ 258 (812)
.+..|++++.|+.|..+|..+++..-... ...+......+..+| ++. ++.+. .++.|..||..++
T Consensus 120 ~~g~v~v~~~dg~l~AlDa~TG~~~W~~~--~~~~~~~~~~~~~sP~v~~g~-v~vg~~~~~~~~~g~v~a~D~~tG--- 193 (689)
T 1yiq_A 120 WKGKVYVGVLDGRLEAIDAKTGQRAWSVD--TRADHKRSYTITGAPRVVNGK-VVIGNGGAEFGVRGYVTAYDAETG--- 193 (689)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEE--CCSCTTSCCBCCSCCEEETTE-EEECCBCTTTCCBCEEEEEETTTC---
T ss_pred ECCEEEEEccCCEEEEEECCCCCEeeeec--CcCCCCCCccccCCcEEECCE-EEEEeCCCccCCCCEEEEEECCCC---
Confidence 35677888889999999998887421111 110111111111112 444 44443 3688999999987
Q ss_pred CCCCCCceEEcC-------------------------------CCCcEEEEEecCCCCCEEEEEeCCCc-----------
Q psy4510 259 GIPTPPLFSFSG-------------------------------HLTEGFAMDWSSTEPGVLATGDCKRN----------- 296 (812)
Q Consensus 259 ~~~~~~~~~~~~-------------------------------h~~~v~~l~~sp~~~~~l~sg~~dg~----------- 296 (812)
+.+..+.. +......+++.|+. ++++.+..++.
T Consensus 194 ----~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~-~~vy~~~~~g~~w~~~~~~~~~ 268 (689)
T 1yiq_A 194 ----KEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPEL-NLLYIGVGNGSLWDPKWRSQAK 268 (689)
T ss_dssp ----CEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHHTTC
T ss_pred ----cEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCC-CEEEEeCCCCCccccCCCCCCC
Confidence 33333321 01111257788877 78888877763
Q ss_pred --------EEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcccce
Q psy4510 297 --------IHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSCM 358 (812)
Q Consensus 297 --------i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~ 358 (812)
|..+|..+++. |... ...|. ..+.......+++ .+++.++.+|.++++|.++++.....
T Consensus 269 gd~~y~~~v~AlD~~TG~~~W~~~---~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 269 GDNLFLSSIVAVNADTGEYVWHYQ---TTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELLSAK 345 (689)
T ss_dssp SCCTTTTEEEEEETTTCCEEEEEE---SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred CCceeeeeEEEEEccCCceeEeee---cCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEeccc
Confidence 99999999874 2111 11121 1221112222342 36888999999999999865432110
Q ss_pred eecC------------------------CcCC-----------CCeEEEEEcCCCCEEEEEeC-----------------
Q psy4510 359 LTLP------------------------NAHT-----------SDVNVISWNRTEPLIVSGGD----------------- 386 (812)
Q Consensus 359 ~~~~------------------------~~~~-----------~~v~~l~~~~~~~~l~sg~~----------------- 386 (812)
.... .... ..-..++++|+..++++...
T Consensus 346 ~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~ 425 (689)
T 1yiq_A 346 GIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNP 425 (689)
T ss_dssp ESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCS
T ss_pred cccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccc
Confidence 0000 0000 01123788888887776532
Q ss_pred ----------------------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEE
Q psy4510 387 ----------------------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIAL 438 (812)
Q Consensus 387 ----------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~i 438 (812)
+|.|+.||+. +++.+..+..+.. +..-.+...+ .+++.++.|+.|+.
T Consensus 426 ~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~---tG~~~W~~~~~~~-~~~g~~~tag-glvf~gt~dg~l~a 500 (689)
T 1yiq_A 426 FKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV---KQQAAWEVPYVTI-FNGGTLSTAG-NLVFEGSADGRVIA 500 (689)
T ss_dssp CTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT---TTEEEEEEEESSS-CCCCEEEETT-TEEEEECTTSEEEE
T ss_pred cccccccCccccccCcccccCCCCCCCcceeEEEEECC---CCCeEeEccCCCC-ccCccceECC-CEEEEECCCCcEEE
Confidence 3779999997 5667777665432 3333445555 48888999999999
Q ss_pred EEcCCCC
Q psy4510 439 WDLAVER 445 (812)
Q Consensus 439 wd~~~~~ 445 (812)
||.++++
T Consensus 501 ~D~~tG~ 507 (689)
T 1yiq_A 501 YAADTGE 507 (689)
T ss_dssp EETTTCC
T ss_pred EECCCCc
Confidence 9999984
No 238
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.50 E-value=5.6e-05 Score=78.61 Aligned_cols=235 Identities=10% Similarity=0.002 Sum_probs=138.0
Q ss_pred eeeEc--CCCCcEEEe-eCCCceEEeeCCCCCCCCCCCCCceEEc------C-CCCcEEEEEecCCCCCEEEEEeCC---
Q psy4510 228 DLQWS--DLKTALQTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFS------G-HLTEGFAMDWSSTEPGVLATGDCK--- 294 (812)
Q Consensus 228 ~l~~s--~~~~~l~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~------~-h~~~v~~l~~sp~~~~~l~sg~~d--- 294 (812)
+.+++ .++++|+.. ..++.|.|.|+.+... ..+...++. . -...-..+..+|++ +++++..+
T Consensus 86 ~~~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~---~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG--i~Vs~~g~~~g 160 (462)
T 2ece_A 86 CPNGKPNIERRFLIVPGLRSSRIYIIDTKPNPR---EPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA--IYISALGNEEG 160 (462)
T ss_dssp STTCCTTCCSCEEEEEBTTTCCEEEEECCSCTT---SCEEEEEECHHHHHHHHCEEEEEEEEECSSC--EEEEEEEETTS
T ss_pred ccccCCCccCCEEEEccCCCCeEEEEECCCCCC---CceeeeeechhhcccccCCCcccceeECCCe--EEEEcCCCcCC
Confidence 34556 788877655 4788999999875310 112233331 0 11244567888997 65555544
Q ss_pred ---CcEEEEeCCCCCcceeccccccC--C-CCCEEEEEEcCCCCeEEEEEE-------------------CCCeEEEEEC
Q psy4510 295 ---RNIHIWTPREAGAWQVDQKPLVG--H-TNSVEDLQWSPGEKRVLASCS-------------------VDLSIRIWDT 349 (812)
Q Consensus 295 ---g~i~vwd~~~~~~~~~~~~~~~~--h-~~~v~~~~~~p~~~~~l~s~~-------------------~dg~i~iwd~ 349 (812)
|.|.+.|..+.+ ....+.. . ...-.++.|+|+++ ++++.. ...+|.+||+
T Consensus 161 ~~~g~v~vlD~~T~~----v~~~~~~~~~~~~~~Yd~~~~p~~~-~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 161 EGPGGILMLDHYSFE----PLGKWEIDRGDQYLAYDFWWNLPNE-VLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp CSCCEEEEECTTTCC----EEEECCSBCTTCCCCCCEEEETTTT-EEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CCCCeEEEEECCCCe----EEEEEccCCCCccccceEEECCCCC-EEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 789999999876 3333321 1 22345788999999 466653 3789999999
Q ss_pred CCCCcccceeecCCc-CCCCeEEEEE--cCCCCEEEEEe------CCCcEEEEecCCCCCCCceEEc--cc---------
Q psy4510 350 RVINTKSCMLTLPNA-HTSDVNVISW--NRTEPLIVSGG------DDGCIHVWDLRRFKKGSSVATF--KH--------- 409 (812)
Q Consensus 350 ~~~~~~~~~~~~~~~-~~~~v~~l~~--~~~~~~l~sg~------~dg~i~iwd~~~~~~~~~~~~~--~~--------- 409 (812)
.+. +.+.++..+ .......+.| +|+++++++++ .+++|.+|.... ......+.+ ..
T Consensus 236 ~~~---k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~-g~~~~~~vIdi~~~~v~~~lp~ 311 (462)
T 2ece_A 236 RKR---KRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYED-GKWNAEKVIEIPAEPLEGNLPE 311 (462)
T ss_dssp TTT---EEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEET-TEEEEEEEEEECCEECCSSCCG
T ss_pred CCC---cEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecC-CceeEEEEEeCCCccccccccc
Confidence 853 333444222 1123344555 99999766665 566887766542 101111110 00
Q ss_pred -------CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC-----------C-
Q psy4510 410 -------HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG-----------Q- 470 (812)
Q Consensus 410 -------h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~- 470 (812)
-......|.++|++..+.++.-..+.|.++|+...... ..+..+..+ .
T Consensus 312 ~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~~~~-------------~lv~~I~tGG~~~~~~~~~G~~ 378 (462)
T 2ece_A 312 ILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNPFKP-------------VLTGKVKLGGIFHRADHPAGHK 378 (462)
T ss_dssp GGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSSTTSC-------------EEEEEEECBTTTTCBCCTTSCC
T ss_pred cccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCCCCc-------------EEEEEEEeCCeecccccccccc
Confidence 02346789999998644555555789999998633211 011122221 0
Q ss_pred --CceeEEEEcCCCCCEEEEE
Q psy4510 471 --KEIKELHWHPQLPGTIIST 489 (812)
Q Consensus 471 --~~v~~~~~~p~~~~~~~~~ 489 (812)
.....+.++|++..++++.
T Consensus 379 ~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 379 LTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp CCSCCCCEEECTTSSEEEEEC
T ss_pred CCCCCCEEEEcCCCCEEEEEc
Confidence 1357788999987777776
No 239
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.48 E-value=0.00014 Score=76.57 Aligned_cols=128 Identities=12% Similarity=-0.014 Sum_probs=79.5
Q ss_pred CCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCC
Q psy4510 599 GSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK 678 (812)
Q Consensus 599 g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~D 678 (812)
+..++++ +.++.|..+|..+++. +.... ......+... +..|..++.+
T Consensus 239 ~~~v~~~--~~~g~l~~~d~~tG~~-------------------------~w~~~--~~~~~~~~~~---~~~l~~~~~~ 286 (376)
T 3q7m_A 239 NGVVFAL--AYNGNLTALDLRSGQI-------------------------MWKRE--LGSVNDFIVD---GNRIYLVDQN 286 (376)
T ss_dssp TTEEEEE--CTTSCEEEEETTTCCE-------------------------EEEEC--CCCEEEEEEE---TTEEEEEETT
T ss_pred CCEEEEE--ecCcEEEEEECCCCcE-------------------------Eeecc--CCCCCCceEE---CCEEEEEcCC
Confidence 3456666 6788999999987752 22221 1123334432 3467777788
Q ss_pred ceEEEEecCCCceeEEEE---------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEEecCCce
Q psy4510 679 RNIHIWTPREAGAWSVYL---------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 749 (812)
Q Consensus 679 g~v~iWd~~~~~~~~~~~---------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~fs~dg~~ 749 (812)
+.|..+|..+|+..-... ....+..|.+++.+|.|+++|..+++. +.........+.+.....++.
T Consensus 287 g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~l~v~~~~g~l~~~d~~tG~~----~~~~~~~~~~~~~~~~~~~~~- 361 (376)
T 3q7m_A 287 DRVMALTIDGGVTLWTQSDLLHRLLTSPVLYNGNLVVGDSEGYLHWINVEDGRF----VAQQKVDSSGFQTEPVAADGK- 361 (376)
T ss_dssp CCEEEEETTTCCEEEEECTTTTSCCCCCEEETTEEEEECTTSEEEEEETTTCCE----EEEEECCTTCBCSCCEEETTE-
T ss_pred CeEEEEECCCCcEEEeecccCCCcccCCEEECCEEEEEeCCCeEEEEECCCCcE----EEEEecCCCcceeCCEEECCE-
Confidence 899999998877532211 011346788889999999999999873 223322223333322223554
Q ss_pred eEEeeccCCceEEee
Q psy4510 750 VLASCSVDRSNRIGA 764 (812)
Q Consensus 750 ~L~s~s~Dg~i~iWd 764 (812)
|+.++.||.|..|+
T Consensus 362 -l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 362 -LLIQAKDGTVYSIT 375 (376)
T ss_dssp -EEEEBTTSCEEEEE
T ss_pred -EEEEeCCCEEEEEe
Confidence 77788899999886
No 240
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.48 E-value=0.00033 Score=73.62 Aligned_cols=146 Identities=9% Similarity=0.041 Sum_probs=83.3
Q ss_pred CEEEEEeCCCcEEEEeCCCCCc-ceeccccccC--C--CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee
Q psy4510 286 GVLATGDCKRNIHIWTPREAGA-WQVDQKPLVG--H--TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT 360 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~--h--~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 360 (812)
+.+++++.++.|..+|..+++. |......... + ...+...... .+. .++.++.++.|..+|..+++. +..
T Consensus 54 ~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~v~v~~~~g~l~a~d~~tG~~---~W~ 128 (376)
T 3q7m_A 54 NVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTV-SGG-HVYIGSEKAQVYALNTSDGTV---AWQ 128 (376)
T ss_dssp TEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEE-ETT-EEEEEETTSEEEEEETTTCCE---EEE
T ss_pred CEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceE-eCC-EEEEEcCCCEEEEEECCCCCE---EEE
Confidence 6788888889999999988763 2211110000 0 1223222222 234 477788899999999986543 222
Q ss_pred cCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCE-----EEEEEccCCCcEEEEEECCCC
Q psy4510 361 LPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPV-----TTVEWHPTESSTFASGGADDQ 435 (812)
Q Consensus 361 ~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v-----~~v~~~p~~~~~l~s~~~dg~ 435 (812)
... ........... +..++.++.++.|..+|.+ +++.+..+....... ...... + ..++.++.++.
T Consensus 129 ~~~-~~~~~~~p~~~--~~~v~v~~~~g~l~~~d~~---tG~~~W~~~~~~~~~~~~~~~~~~~~--~-~~v~~g~~~g~ 199 (376)
T 3q7m_A 129 TKV-AGEALSRPVVS--DGLVLIHTSNGQLQALNEA---DGAVKWTVNLDMPSLSLRGESAPTTA--F-GAAVVGGDNGR 199 (376)
T ss_dssp EEC-SSCCCSCCEEE--TTEEEEECTTSEEEEEETT---TCCEEEEEECCC-----CCCCCCEEE--T-TEEEECCTTTE
T ss_pred EeC-CCceEcCCEEE--CCEEEEEcCCCeEEEEECC---CCcEEEEEeCCCCceeecCCCCcEEE--C-CEEEEEcCCCE
Confidence 211 11111111111 4478888899999999997 466666554322111 112222 2 36777888899
Q ss_pred EEEEEcCCCC
Q psy4510 436 IALWDLAVER 445 (812)
Q Consensus 436 v~iwd~~~~~ 445 (812)
|..+|..+++
T Consensus 200 l~~~d~~tG~ 209 (376)
T 3q7m_A 200 VSAVLMEQGQ 209 (376)
T ss_dssp EEEEETTTCC
T ss_pred EEEEECCCCc
Confidence 9999998773
No 241
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.47 E-value=1.1e-05 Score=83.04 Aligned_cols=243 Identities=12% Similarity=0.042 Sum_probs=144.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccccc-cc--------------CCCCCCeeeeeEcC-CCCcEEE
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK-PL--------------GGHTNSAEDLQWSD-LKTALQT 240 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~-~l--------------~~h~~~V~~l~~s~-~~~~l~s 240 (812)
.....++|.+ +++++.++..++.|..|+..+......... .. ......+..+++.+ +++ |..
T Consensus 19 ~~p~~i~~d~-~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDS-TNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCT-TCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcC-CCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 3455688999 899888888899999998876432110000 00 00123578899997 554 555
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEcC-----CCCcEEEEEecC-CCCCEEEEEeC-----------------CCcE
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFSG-----HLTEGFAMDWSS-TEPGVLATGDC-----------------KRNI 297 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp-~~~~~l~sg~~-----------------dg~i 297 (812)
+...+.+.+++..++ .+..+.. .......+++.+ ++ .+.++-.. .+.|
T Consensus 97 ~d~~~~i~~~d~~~g--------~~~~~~~~~~~~~~~~p~~i~~d~~~G-~l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGG--------HATQLATSVDGVPFKWLYAVTVDQRTG-IVYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp EETTTEEEEECTTCE--------ECEEEESEETTEECSCEEEEEECTTTC-CEEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred EECCCCEEEEeCCCC--------EEEEecccCCCCcccccceEEEecCCC-EEEEECCcccccccccceehcccCCCceE
Confidence 554455788886653 1122211 113467899999 87 55555322 3678
Q ss_pred EEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 298 HIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 298 ~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
..++..++.. ..+.......+.++|+|+++.++++-+..+.|..+++....... ...+.. ..+ ...+++.++
T Consensus 168 ~~~d~~~~~~-----~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~-~~g-P~gi~~d~~ 239 (322)
T 2fp8_A 168 IKYDPSTKET-----TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVK-IPN-PGNIKRNAD 239 (322)
T ss_dssp EEEETTTTEE-----EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEE-CSS-EEEEEECTT
T ss_pred EEEeCCCCEE-----EEeccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEe-CCC-CCCeEECCC
Confidence 8888765531 11111123456799999998656666677899999987432111 111111 123 788999999
Q ss_pred CCEEEEEeC----------CCcEEEEecCCCCCCCceEEcccCC----CCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 378 EPLIVSGGD----------DGCIHVWDLRRFKKGSSVATFKHHT----APVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 378 ~~~l~sg~~----------dg~i~iwd~~~~~~~~~~~~~~~h~----~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
|+++++... .+.|..+|.. ++.+..+.... ..++++.+. + ..++++....+.|..+++..
T Consensus 240 G~l~va~~~~~~~~~~~~~~~~v~~~d~~----G~~~~~~~~~~g~~~~~~~~~~~~-~-g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 240 GHFWVSSSEELDGNMHGRVDPKGIKFDEF----GNILEVIPLPPPFAGEHFEQIQEH-D-GLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp SCEEEEEEEETTSSTTSCEEEEEEEECTT----SCEEEEEECCTTTTTSCCCEEEEE-T-TEEEEECSSCSEEEEEEC--
T ss_pred CCEEEEecCcccccccCCCccEEEEECCC----CCEEEEEECCCCCccccceEEEEe-C-CEEEEeecCCCceEEEeccc
Confidence 986666544 4667888763 45555554332 346667663 3 35666655678899999865
Q ss_pred C
Q psy4510 444 E 444 (812)
Q Consensus 444 ~ 444 (812)
.
T Consensus 314 ~ 314 (322)
T 2fp8_A 314 K 314 (322)
T ss_dssp -
T ss_pred c
Confidence 4
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.45 E-value=1.2e-05 Score=91.32 Aligned_cols=237 Identities=11% Similarity=0.074 Sum_probs=140.7
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccccccccCCC-----CCCeeeeeEcCCCCcEEEeeC------CCceEEeeCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH-----TNSAEDLQWSDLKTALQTVDD------PFQLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h-----~~~V~~l~~s~~~~~l~s~~~------d~~i~vwd~~~~~ 256 (812)
.+..|++++.|+.|..+|..+++.. ..+..+ ...+.+.-...+ ..++.++. ++.|+.+|..++
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~----W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG- 200 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEV----WHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETG- 200 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEE----EEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTC-
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEE----eeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCC-
Confidence 4567777888999999999888742 222211 112222111123 34554443 688999999887
Q ss_pred CCCCCCCCceEEcCCC--------------------------------CcEEEEEecCCCCCEEEEEeCCC---------
Q psy4510 257 GPGIPTPPLFSFSGHL--------------------------------TEGFAMDWSSTEPGVLATGDCKR--------- 295 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~--------------------------------~~v~~l~~sp~~~~~l~sg~~dg--------- 295 (812)
+.+.++.... .....+++.|++ ++++.+..++
T Consensus 201 ------~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~-~~vy~~~~~~~~w~~~~~~ 273 (677)
T 1kb0_A 201 ------ERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAEL-NTMYVGTGNGSPWSHKVRS 273 (677)
T ss_dssp ------CEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHS
T ss_pred ------cEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCC-CEEEEECCCCccccCCCCC
Confidence 3343332211 111357788887 7877776654
Q ss_pred ----------cEEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcc
Q psy4510 296 ----------NIHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTK 355 (812)
Q Consensus 296 ----------~i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~ 355 (812)
.|..+|..+++. |.. ....|. ....-+....+|+ .+++.++.+|.|+++|.++++..
T Consensus 274 ~~~gd~~~~~sv~AlD~~TG~~~W~~---~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l 350 (677)
T 1kb0_A 274 PKGGDNLYLASIVALDPDTGKYKWHY---QETPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFI 350 (677)
T ss_dssp TTCCCCTTTTEEEEECTTTCCEEEEE---ESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred ccCCCCeeeEEEEEEECCCCCEEEEE---ecCCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEe
Confidence 499999998874 221 111121 1122223333563 47899999999999999865432
Q ss_pred cceeecC-------CcCCCC------------------------eEEEEEcCCCCEEEEEeC------------------
Q psy4510 356 SCMLTLP-------NAHTSD------------------------VNVISWNRTEPLIVSGGD------------------ 386 (812)
Q Consensus 356 ~~~~~~~-------~~~~~~------------------------v~~l~~~~~~~~l~sg~~------------------ 386 (812)
....... ...... -..++++|++.++++...
T Consensus 351 ~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~ 430 (677)
T 1kb0_A 351 SAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAG 430 (677)
T ss_dssp EEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCC
T ss_pred ccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccc
Confidence 1111000 000000 125688898887776543
Q ss_pred -------------------------CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 387 -------------------------DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 387 -------------------------dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.|.|..||+. +++.+..+.. ..++.+..+...+ .+++.++.||.+++||+
T Consensus 431 ~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~---tG~~~W~~~~-~~~~~~g~~~~~g-~~v~~g~~dg~l~a~D~ 505 (677)
T 1kb0_A 431 PGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPV---AQKAAWSVEH-VSPWNGGTLTTAG-NVVFQGTADGRLVAYHA 505 (677)
T ss_dssp TTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETT---TTEEEEEEEE-SSSCCCCEEEETT-TEEEEECTTSEEEEEET
T ss_pred ccccccccccccccccccccCCCCCccEEEEEeCC---CCcEEeecCC-CCCCcCcceEeCC-CEEEEECCCCcEEEEEC
Confidence 2779999997 4666666653 3344444556665 47777899999999999
Q ss_pred CCCC
Q psy4510 442 AVER 445 (812)
Q Consensus 442 ~~~~ 445 (812)
.+++
T Consensus 506 ~tG~ 509 (677)
T 1kb0_A 506 ATGE 509 (677)
T ss_dssp TTCC
T ss_pred CCCc
Confidence 9884
No 243
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.43 E-value=4.5e-08 Score=102.92 Aligned_cols=183 Identities=11% Similarity=-0.012 Sum_probs=98.1
Q ss_pred CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccc
Q psy4510 234 LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 234 ~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~ 313 (812)
++..+++++.++.|..||..++ +.+.++.. +.+.+..+..++ .++++++.||.|+.||..+++. ..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG-------~~~W~~~~--~~~~s~p~~~~g-~~~v~~s~dg~l~a~d~~tG~~----~w 73 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTG-------SIKWTLKE--DPVLQVPTHVEE-PAFLPDPNDGSLYTLGSKNNEG----LT 73 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTC-------CEEEEEEC--CCSCCCC------CCEEECTTTCCEEEC-----CC----SE
T ss_pred eCCEEEEEcCCCEEEEEECCCC-------CEEEEecC--CCceecceEcCC-CEEEEeCCCCEEEEEECCCCce----ee
Confidence 4678899999999999999986 66666665 445555555565 5778888999999999987763 11
Q ss_pred cccCCCC-CEE-EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 314 PLVGHTN-SVE-DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 314 ~~~~h~~-~v~-~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
.+..+.. .+. ...+. .+. .+++++.++.|+.||.++++. +..+ ..+. ...++|.+..+++++.++.|+
T Consensus 74 ~~~~~~~~~~~~sp~~~-~~~-~v~~g~~dg~v~a~D~~tG~~---~w~~-~~~~----~~~~~p~~~~v~~~~~dg~v~ 143 (369)
T 2hz6_A 74 KLPFTIPELVQASPCRS-SDG-ILYMGKKQDIWYVIDLLTGEK---QQTL-SSAF----ADSLSPSTSLLYLGRTEYTIT 143 (369)
T ss_dssp ECSCCHHHHHTTCSCC-------CCCCEEEEEEEEECCC------------------------------EEEEEEEEEEE
T ss_pred eeeccCccccccCceEe-cCC-EEEEEeCCCEEEEEECCCCcE---EEEe-cCCC----cccccccCCEEEEEecCCEEE
Confidence 1111100 000 00111 233 477888899999999986543 3333 2221 234566778899999999999
Q ss_pred EEecCCCCCCCceEEcccCCCCEEEEEEccCC--CcEEEEEECCCCEEEEEcCCCC
Q psy4510 392 VWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE--SSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 392 iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~--~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.||.++ ++.+..+..+. .....+.++. ...+++++.+|.|..||..+++
T Consensus 144 a~d~~t---G~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 144 MYDTKT---RELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCCSSS---SSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCC
T ss_pred EEECCC---CCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCc
Confidence 999984 44444433211 1222333321 0356778889999999998773
No 244
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.41 E-value=5.9e-05 Score=76.77 Aligned_cols=233 Identities=9% Similarity=-0.019 Sum_probs=136.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC--ceEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF--QLAEHNKKR 254 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~ 254 (812)
.....++|+| +++++++-..++.|..||...... ... ........+++.++++++++..... .|..++..+
T Consensus 32 ~~pegia~~~-~g~lyv~d~~~~~I~~~d~~g~~~---~~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAP-DGTIFVTNHEVGEIVSITPDGNQQ---IHA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECT-TSCEEEEETTTTEEEEECTTCCEE---EEE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECC-CCCEEEEeCCCCeEEEECCCCceE---EEE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4567899999 999888887889999998765321 111 1224688999999999655543332 355566555
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee-ccc-----cccCCCCCEEEEEEc
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV-DQK-----PLVGHTNSVEDLQWS 328 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~-~~~-----~~~~h~~~v~~~~~~ 328 (812)
+ ....+..+ ........++..+.+ ..+++-...+.|.++|...+..... ... ...+.-...+.+ +
T Consensus 105 g-----~~~~~~~~-~~~~~~~g~~~~~~~-~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s 175 (306)
T 2p4o_A 105 G-----TVETLLTL-PDAIFLNGITPLSDT-QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--K 175 (306)
T ss_dssp S-----CEEEEEEC-TTCSCEEEEEESSSS-EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--E
T ss_pred C-----eEEEEEeC-CCccccCcccccCCC-cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--C
Confidence 4 11111111 112233455555543 3445444588899998765321000 000 011112245556 7
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCc--eEE
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSS--VAT 406 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~--~~~ 406 (812)
|+++.++++-...+.|..+++...........+.. ......+++.++|+++++....+.|.++|.. ++. +..
T Consensus 176 ~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~--~~~P~gi~vd~dG~l~va~~~~~~V~~~~~~----G~~~~~~~ 249 (306)
T 2p4o_A 176 RFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE--QTNIDDFAFDVEGNLYGATHIYNSVVRIAPD----RSTTIIAQ 249 (306)
T ss_dssp EETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE--SCCCSSEEEBTTCCEEEECBTTCCEEEECTT----CCEEEEEC
T ss_pred cCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec--cCCCCCeEECCCCCEEEEeCCCCeEEEECCC----CCEEEEee
Confidence 88887777777889999999874111111111101 1235668899999887777778899999974 333 223
Q ss_pred cccCCCCEEEEEEc---cCCCcEEEEEE
Q psy4510 407 FKHHTAPVTTVEWH---PTESSTFASGG 431 (812)
Q Consensus 407 ~~~h~~~v~~v~~~---p~~~~~l~s~~ 431 (812)
+.......++++|. |++..++++..
T Consensus 250 ~~~~~~~p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 250 AEQGVIGSTAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp GGGTCTTEEEEEECCSTTTTTEEEEEEC
T ss_pred cccccCCceEEEEecccCCCCEEEEECC
Confidence 44334568999998 77654444433
No 245
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.37 E-value=0.007 Score=67.64 Aligned_cols=199 Identities=12% Similarity=0.015 Sum_probs=127.9
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~ 254 (812)
...+..++|++.++.+.++-..++.|+.+++..... ...+..-......||+.+.+..|..+. ..+.|.+.++..
T Consensus 36 ~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG 111 (628)
T 4a0p_A 36 VKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDG 111 (628)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCC
Confidence 355788999995566666777788999998876432 112222224577899988777665554 567888888875
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. .....+...-....+|++.|.. +.|..... .+.|...++..... ..+...-...+.|++.++++
T Consensus 112 ~-------~~~~l~~~~l~~P~~iavdp~~-G~lY~tD~g~~~~I~r~~~dG~~~-----~~l~~~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 112 Q-------HRQVLVWKDLDSPRALALDPAE-GFMYWTEWGGKPKIDRAAMDGSER-----TTLVPNVGRANGLTIDYAKR 178 (628)
T ss_dssp T-------TCEEEECSSCCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCSC-----EEEECSCSSEEEEEEETTTT
T ss_pred C-------cEEEEEeCCCCCcccEEEccCC-CeEEEeCCCCCCEEEEEeCCCCce-----EEEECCCCCcceEEEccccC
Confidence 3 2212222344567899999976 45555543 46777777765542 12222345788999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~ 397 (812)
.++++-...+.|...|+..... . + + .........+++.. +.++++-...+.|...|...
T Consensus 179 ~LY~aD~~~~~I~~~d~dG~~~-~-v--~-~~~l~~P~glav~~-~~ly~tD~~~~~I~~~dk~t 237 (628)
T 4a0p_A 179 RLYWTDLDTNLIESSNMLGLNR-E-V--I-ADDLPHPFGLTQYQ-DYIYWTDWSRRSIERANKTS 237 (628)
T ss_dssp EEEEEETTTTEEEEEETTSCSC-E-E--E-EECCSCEEEEEEET-TEEEEEETTTTEEEEEETTT
T ss_pred EEEEEECCCCEEEEEcCCCCce-E-E--e-eccCCCceEEEEEC-CEEEEecCCCCEEEEEECCC
Confidence 7777777788999999875322 1 2 1 12233456777764 44556655678888888653
No 246
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.32 E-value=2.9e-05 Score=75.78 Aligned_cols=197 Identities=10% Similarity=0.043 Sum_probs=128.2
Q ss_pred CeeeeeEcCCCCcEEEeeC--CCceEEeeCCCCCCCCCCCCCceEEcC-CCCcEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 225 SAEDLQWSDLKTALQTVDD--PFQLAEHNKKRGKGPGIPTPPLFSFSG-HLTEGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~~~~-h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
....++|++++.+.++.+. ++.|++.|..++ +.+.++.- .......+++. +..+.++.-.++.+.++|
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg-------~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD 92 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTG-------KVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYD 92 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCC-------CEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEE
Confidence 3578999998755455443 678999999986 45555432 12233455555 424555555689999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc----CCCCeEEEEEcCC
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA----HTSDVNVISWNRT 377 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----~~~~v~~l~~~~~ 377 (812)
..+.+. ...+...... ...++++++.++++- .++.|.++|..+... +..+.-+ .-..++.+.|. +
T Consensus 93 ~~t~~v----~~~i~~g~~~--g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v---~~~I~Vg~~~~p~~~~nele~~-d 161 (266)
T 2iwa_A 93 RRTLSN----IKNFTHQMKD--GWGLATDGKILYGSD-GTSILYEIDPHTFKL---IKKHNVKYNGHRVIRLNELEYI-N 161 (266)
T ss_dssp TTTTEE----EEEEECCSSS--CCEEEECSSSEEEEC-SSSEEEEECTTTCCE---EEEEECEETTEECCCEEEEEEE-T
T ss_pred CCCCcE----EEEEECCCCC--eEEEEECCCEEEEEC-CCCeEEEEECCCCcE---EEEEEECCCCcccccceeEEEE-C
Confidence 987752 2333211111 123455777666554 688999999985433 3333211 11247788888 6
Q ss_pred CCEEEEEeCCCcEEEEecCCCCCCCceEEcccC-------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 378 EPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH-------------TAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 378 ~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.+++....++.|.+.|.. +++.+..+... ......|+|+|++.++++++...+.|.+.++...
T Consensus 162 g~lyvn~~~~~~V~vID~~---tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 162 GEVWANIWQTDCIARISAK---DGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp TEEEEEETTSSEEEEEETT---TCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CEEEEecCCCCeEEEEECC---CCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 7666666678899999998 46666665421 1356899999998888888888889999888655
No 247
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.30 E-value=4.9e-05 Score=86.42 Aligned_cols=200 Identities=11% Similarity=0.092 Sum_probs=110.9
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCC-----------CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT-----------NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~-----------~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
+..|++++.++.|.-+|..+++.. -...... .....+++ .+..|+.++.++.|..+|..++
T Consensus 77 ~g~vyv~~~~~~v~AlD~~tG~~~----W~~~~~~~~~~~~~~~~~~~~~~~a~--~~~~v~v~~~dg~l~alD~~tG-- 148 (677)
T 1kb0_A 77 DGIMYVSASWSVVHAIDTRTGNRI----WTYDPQIDRSTGFKGCCDVVNRGVAL--WKGKVYVGAWDGRLIALDAATG-- 148 (677)
T ss_dssp TTEEEEECGGGCEEEEETTTTEEE----EEECCCCCGGGGGGSSSCSCCCCCEE--ETTEEEEECTTSEEEEEETTTC--
T ss_pred CCEEEEECCCCeEEEEECCCCcEE----EEEcCCCCccccccccccCCCCCceE--ECCEEEEEcCCCEEEEEECCCC--
Confidence 344555555677777777766531 1111100 00122333 4567888889999999999987
Q ss_pred CCCCCCCceEEcCC-C-CcEEEEEecC--CCCCEEEEEeC------CCcEEEEeCCCCCc-ceecccccc----------
Q psy4510 258 PGIPTPPLFSFSGH-L-TEGFAMDWSS--TEPGVLATGDC------KRNIHIWTPREAGA-WQVDQKPLV---------- 316 (812)
Q Consensus 258 ~~~~~~~~~~~~~h-~-~~v~~l~~sp--~~~~~l~sg~~------dg~i~vwd~~~~~~-~~~~~~~~~---------- 316 (812)
+.+..+..+ . .....+.-+| .+ +.++.++. +|.|+.+|..+++. |......-.
T Consensus 149 -----~~~W~~~~~~~~~~~~~~~~~p~v~~-~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~ 222 (677)
T 1kb0_A 149 -----KEVWHQNTFEGQKGSLTITGAPRVFK-GKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESM 222 (677)
T ss_dssp -----CEEEEEETTTTCCSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHH
T ss_pred -----CEEeeecCCcCcCcCcccccCcEEEC-CEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccc
Confidence 555555543 1 0000011111 12 45555543 68999999998874 222110000
Q ss_pred -----------------CCCCCEEEEEEcCCCCeEEEEEECCC-------------------eEEEEECCCCCcccceee
Q psy4510 317 -----------------GHTNSVEDLQWSPGEKRVLASCSVDL-------------------SIRIWDTRVINTKSCMLT 360 (812)
Q Consensus 317 -----------------~h~~~v~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~ 360 (812)
+.......+++.|++. +++.++.++ .|..+|.++++.......
T Consensus 223 ~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~-~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~ 301 (677)
T 1kb0_A 223 KRAARTWDPSGKWWEAGGGGTMWDSMTFDAELN-TMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE 301 (677)
T ss_dssp HHHHTTSCGGGCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES
T ss_pred ccccccccccCceeEeCCCcccccceeEcCCCC-EEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec
Confidence 1112224678888887 466666553 599999986543322221
Q ss_pred cCCcC-------CCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcc
Q psy4510 361 LPNAH-------TSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFK 408 (812)
Q Consensus 361 ~~~~~-------~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~ 408 (812)
..| ......+....+| ..++.++.+|.|+++|.+ +++.+..+.
T Consensus 302 --~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~---tG~~l~~~~ 354 (677)
T 1kb0_A 302 --TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRT---NGKFISAKN 354 (677)
T ss_dssp --STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEEEEE
T ss_pred --CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECC---CCCEecccc
Confidence 112 1223333444467 589999999999999998 466665543
No 248
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=9.6e-06 Score=87.46 Aligned_cols=97 Identities=6% Similarity=0.001 Sum_probs=64.7
Q ss_pred CCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE-c-CCCCEEEEEe------------------CCC
Q psy4510 329 PGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW-N-RTEPLIVSGG------------------DDG 388 (812)
Q Consensus 329 p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~-~-~~~~~l~sg~------------------~dg 388 (812)
++|++++++...++.|.+.|+.+.+....+ .++ .......+++ . |++.++++++ .++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii-~ip--~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~ 175 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAIL-EIP--NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVN 175 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEE-ECS--SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEE-eCC--CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCc
Confidence 378877887778889999999954332222 442 2345788887 4 8999888874 245
Q ss_pred cEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 389 CIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 389 ~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
.+.+.|.. +.+.+.++.--. .-..++++|++. ++++++.+
T Consensus 176 ~vtvID~~---t~~v~~qI~Vgg-~pd~~~~spdGk-~~~vt~~~ 215 (595)
T 1fwx_A 176 VFTAVDAD---KWEVAWQVLVSG-NLDNCDADYEGK-WAFSTSYN 215 (595)
T ss_dssp EEEEEETT---TTEEEEEEEESS-CCCCEEECSSSS-EEEEEESC
T ss_pred eEEEEECC---CCeEEEEEEeCC-CccceEECCCCC-EEEEEecC
Confidence 78999997 345555554322 335678999874 66666644
No 249
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=98.26 E-value=0.012 Score=65.77 Aligned_cols=225 Identities=8% Similarity=-0.039 Sum_probs=127.9
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGF 276 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~ 276 (812)
...|+.-++..... ....+...-....+|+|++.+..|.-+. ..+.|..+++... ......+........
T Consensus 17 ~~~I~~i~~~~~~~---~~~~~~~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~------~~~~~v~~~~~~~P~ 87 (619)
T 3s94_A 17 RRDLRLVDATNGKE---NATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKT------ESVQNVVVSGLLSPD 87 (619)
T ss_dssp SSBEEEECCC------------CBCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSCEE
T ss_pred cccEEEEeCCCCcc---eEEEEEcCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCC------CceEEEEeCCCCCcC
Confidence 35788888875421 1122223344578999999877777665 4577888887653 112223333335678
Q ss_pred EEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEE-CCCeEEEEECCCCCcc
Q psy4510 277 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCS-VDLSIRIWDTRVINTK 355 (812)
Q Consensus 277 ~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~-~dg~i~iwd~~~~~~~ 355 (812)
.|++.+.+..+.++-...+.|.+.++...... ......-....+|++.|.+..++++-- ..+.|...++....
T Consensus 88 GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~----~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~-- 161 (619)
T 3s94_A 88 GLACDWLGEKLYWTDSETNRIEVSNLDGSLRK----VLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS-- 161 (619)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSCE----EEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCS--
T ss_pred eEEEEecCCEEEEEeCCCCEEEEEECCCCCEE----EEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCCc--
Confidence 89999876355566666789999998765321 111133445789999998776666542 24667777765321
Q ss_pred cceeecCCcCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECC
Q psy4510 356 SCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATF-KHHTAPVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 356 ~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~d 433 (812)
...+....-...+.|++++.+..|+.+ ...+.|...|+.. .....+ .+......+|++..+ .++++-...
T Consensus 162 --~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG----~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~ 233 (619)
T 3s94_A 162 --RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG----TNRQAVVKGSLPHPFALTLFED--ILYWTDWST 233 (619)
T ss_dssp --CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSC----CEEC---------CCCEEESSS--EEEEECTTT
T ss_pred --eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCC----CccEEEEeCCCCCceEEEEeCC--EEEEecCCC
Confidence 111112234567899999876654444 4567888888863 111111 111112245666543 455555567
Q ss_pred CCEEEEEcCCCC
Q psy4510 434 DQIALWDLAVER 445 (812)
Q Consensus 434 g~v~iwd~~~~~ 445 (812)
+.|...|..+++
T Consensus 234 ~~V~~~d~~tg~ 245 (619)
T 3s94_A 234 HSILACNKYTGE 245 (619)
T ss_dssp CSEEEEESSSCC
T ss_pred CEEEEEECCCCc
Confidence 789998887654
No 250
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.26 E-value=2.2e-05 Score=76.58 Aligned_cols=199 Identities=10% Similarity=0.052 Sum_probs=125.6
Q ss_pred ceEEEEeCCCCCCeEEEecC--CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKR 254 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~--dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~ 254 (812)
....++|+| ++.+.++.+. ++.|++.|+.+++.... ..+..+.. ...+++. ++.|..+ -.++.+.++|..+
T Consensus 22 f~~Gl~~~~-dg~Lyvstg~~~~s~v~~iD~~tg~v~~~--i~l~~~~f-geGi~~~--g~~lyv~t~~~~~v~viD~~t 95 (266)
T 2iwa_A 22 FTQGLVYAE-NDTLFESTGLYGRSSVRQVALQTGKVENI--HKMDDSYF-GEGLTLL--NEKLYQVVWLKNIGFIYDRRT 95 (266)
T ss_dssp CEEEEEECS-TTEEEEEECSTTTCEEEEEETTTCCEEEE--EECCTTCC-EEEEEEE--TTEEEEEETTCSEEEEEETTT
T ss_pred CcccEEEeC-CCeEEEECCCCCCCEEEEEECCCCCEEEE--EecCCCcc-eEEEEEe--CCEEEEEEecCCEEEEEECCC
Confidence 357899999 7766665543 57999999999874321 11222222 2245544 5555544 4688999999987
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCe
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~ 333 (812)
. +.+.++..-...... +++++ ..|+++..++.|.++|..+.+.......... ..-..++.+.|. ++.
T Consensus 96 ~-------~v~~~i~~g~~~g~g--lt~Dg-~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~- 163 (266)
T 2iwa_A 96 L-------SNIKNFTHQMKDGWG--LATDG-KILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGE- 163 (266)
T ss_dssp T-------EEEEEEECCSSSCCE--EEECS-SSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE-
T ss_pred C-------cEEEEEECCCCCeEE--EEECC-CEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCE-
Confidence 4 566666432233334 45577 4455555688999999988763111111000 111246788888 564
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCc------------CCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNA------------HTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~------------~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~ 397 (812)
+++....++.|.+.|..++.. +..+... .....+.|+|+|+++ +++++...+.|.+.++..
T Consensus 164 lyvn~~~~~~V~vID~~tg~V---~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~ 237 (266)
T 2iwa_A 164 VWANIWQTDCIARISAKDGTL---LGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHL 237 (266)
T ss_dssp EEEEETTSSEEEEEETTTCCE---EEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEE
T ss_pred EEEecCCCCeEEEEECCCCcE---EEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEec
Confidence 677776789999999986543 3333111 113569999999987 777777889999999874
No 251
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.24 E-value=2.5e-05 Score=75.11 Aligned_cols=184 Identities=10% Similarity=0.125 Sum_probs=112.3
Q ss_pred eeeeeEcCCCCcEEEeeCCC--ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPF--QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR 303 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~--~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~ 303 (812)
...|.|+ ++.+..+.+.+| .|+++|+.++ +.+.++.-. ...+.....+.+..+.+..-.++.+.++|..
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tg-------kv~~~~~l~-~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~ 115 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESG-------KTLQQIELG-KRYFGEGISDWKDKIVGLTWKNGLGFVWNIR 115 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTC-------CEEEEEECC-TTCCEEEEEEETTEEEEEESSSSEEEEEETT
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCC-------cEEEEEecC-CccceeEEEEeCCEEEEEEeeCCEEEEEECc
Confidence 4678998 666666777665 8999999986 555555432 2333322333343455555568999999999
Q ss_pred CCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCC-CCeEEEEEcCCCCEEE
Q psy4510 304 EAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHT-SDVNVISWNRTEPLIV 382 (812)
Q Consensus 304 ~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-~~v~~l~~~~~~~~l~ 382 (812)
+.+ ....+.... .-..++ ++++.++++ ..++.|.++|..+......+..-..+.. ..++.+.|. +|.+++
T Consensus 116 t~~----~~~ti~~~~-eG~glt--~dg~~L~~S-dGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lya 186 (262)
T 3nol_A 116 NLR----QVRSFNYDG-EGWGLT--HNDQYLIMS-DGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFA 186 (262)
T ss_dssp TCC----EEEEEECSS-CCCCEE--ECSSCEEEC-CSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEE
T ss_pred cCc----EEEEEECCC-CceEEe--cCCCEEEEE-CCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEE
Confidence 887 333333211 112333 566755555 4478899999985443322221111111 446677886 676666
Q ss_pred EEeCCCcEEEEecCCCCCCCceEEcccC------------CCCEEEEEEccCCCcEEEEE
Q psy4510 383 SGGDDGCIHVWDLRRFKKGSSVATFKHH------------TAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 383 sg~~dg~i~iwd~~~~~~~~~~~~~~~h------------~~~v~~v~~~p~~~~~l~s~ 430 (812)
..-.+..|.+.|.+ +++.+..+... ....+.|+|+|++.+++++|
T Consensus 187 n~w~~~~I~vIDp~---tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTG 243 (262)
T 3nol_A 187 NVWQTNKIVRIDPE---TGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTG 243 (262)
T ss_dssp EETTSSEEEEECTT---TCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEE
T ss_pred EEccCCeEEEEECC---CCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEEC
Confidence 66678899999998 46665554321 23568999999876555554
No 252
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.24 E-value=2.9e-05 Score=83.76 Aligned_cols=239 Identities=8% Similarity=0.008 Sum_probs=147.1
Q ss_pred CCCeEEEe-cCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-c-CCCCcEEEee------------------CCCc
Q psy4510 188 EPGVLATG-DCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-S-DLKTALQTVD------------------DPFQ 246 (812)
Q Consensus 188 ~~~~lat~-~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-s-~~~~~l~s~~------------------~d~~ 246 (812)
+|++|... ..+++|.+-|+.+.+..... .+. .......+++ + |+++++.+++ .++.
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii--~ip-~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~ 176 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAIL--EIP-NAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNV 176 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEE--ECS-SCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEE--eCC-CCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCce
Confidence 66666554 55677999999987632111 222 1234778887 5 8999998884 2456
Q ss_pred eEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-------------------------------
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR------------------------------- 295 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg------------------------------- 295 (812)
+.+.|..+. +.+.++.--. .-..++++|++ +++++.+.+.
T Consensus 177 vtvID~~t~-------~v~~qI~Vgg-~pd~~~~spdG-k~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~ 247 (595)
T 1fwx_A 177 FTAVDADKW-------EVAWQVLVSG-NLDNCDADYEG-KWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAA 247 (595)
T ss_dssp EEEEETTTT-------EEEEEEEESS-CCCCEEECSSS-SEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHH
T ss_pred EEEEECCCC-------eEEEEEEeCC-CccceEECCCC-CEEEEEecCcccCcchhhccccccceEEEeeccceeEeccC
Confidence 888888763 5555544211 34568899998 6666665432
Q ss_pred -------cEEEEeCCC--CCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCc--------ccce
Q psy4510 296 -------NIHIWTPRE--AGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINT--------KSCM 358 (812)
Q Consensus 296 -------~i~vwd~~~--~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~--------~~~~ 358 (812)
.|.|.|..+ +.. ....+. -.....++.++|+|+++++++..+.+|.++|+.+... ...+
T Consensus 248 Gk~~~i~~V~VID~~~~~~~~---~~~~Ip-vg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v 323 (595)
T 1fwx_A 248 GDYQELNGVKVVDGRKEASSL---FTRYIP-IANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAV 323 (595)
T ss_dssp TCSEEETTEEEEECSGGGCCS---SEEEEE-EESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGE
T ss_pred CCeeEECcEEEEeCcccCCce---eEEEEe-cCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccce
Confidence 355555554 210 011111 1224567899999999888888899999999984210 0111
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC-------CCCCceEEcccCCCCE-----EEEEEccCCCcE
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF-------KKGSSVATFKHHTAPV-----TTVEWHPTESST 426 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~-------~~~~~~~~~~~h~~~v-----~~v~~~p~~~~~ 426 (812)
... ..-......++|+++|...++...|+.|.+||+... +..+.+.++..|-.+- .++.++|+|. +
T Consensus 324 ~~~-v~vG~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk-~ 401 (595)
T 1fwx_A 324 VAE-PELGLGPLHTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND-W 401 (595)
T ss_dssp EEC-CBCCSCEEEEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS-E
T ss_pred EEE-cCCCCCcceEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC-E
Confidence 111 123456788999999955556677999999998641 1145666766665432 1224578874 6
Q ss_pred EEEEEC-C-CCE-----------EEEEcCCC
Q psy4510 427 FASGGA-D-DQI-----------ALWDLAVE 444 (812)
Q Consensus 427 l~s~~~-d-g~v-----------~iwd~~~~ 444 (812)
|+++.. . .++ .++|++..
T Consensus 402 l~~~Nk~skdr~~~~gp~~~~~~ql~dis~~ 432 (595)
T 1fwx_A 402 LVCLSKFSKDRFLNVGPLKPENDQLIDISGD 432 (595)
T ss_dssp EEEEESCCTTSSCCCCSSCCEEEEEEECSSS
T ss_pred EEEcCCCCccccccCCCCCCCcceEEEcCCC
Confidence 666543 2 234 77888655
No 253
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.21 E-value=0.0031 Score=65.12 Aligned_cols=240 Identities=11% Similarity=-0.020 Sum_probs=144.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
+...|.+..+ .+.++++-. ..|+..++..... ...+. ....+.+++|.+.+..|..+. ..+.|..+++...
T Consensus 34 d~~~C~~~~~-~~~ll~~~~--~~I~~i~~~g~~~----~~~~~-~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~ 105 (349)
T 3v64_C 34 DRRSCKALGP-EPVLLFANR--IDIRQVLPHRSEY----TLLLN-NLENAIALDFHHRRELVFWSDVTLDRILRANLNGS 105 (349)
T ss_dssp TSSCEEESSS-CCEEEEECB--SCEEEECTTSCCE----EEEEC-SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCCccccccc-CceeEeecc--cceEEEeCCCCee----EEeec-CCCceEEEEEeccccEEEEEeccCCceEEEecCCC
Confidence 3445666556 554554433 3577777765431 11222 234578999998777666554 5678888888763
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
.....+........++++.+.+..+.++-...+.|.+.++..... ...+.........+++.|.+..++
T Consensus 106 -------~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~l~~P~~iavdp~~g~ly 174 (349)
T 3v64_C 106 -------NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIY 174 (349)
T ss_dssp -------SCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECTTCSCEEEEEEETTTTEEE
T ss_pred -------CceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCce----EEEEeCCCCCcceEEEecCcCeEE
Confidence 222222222334567888876635556666678899999875432 111222335678999999877677
Q ss_pred EEEECC-CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCC
Q psy4510 336 ASCSVD-LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAP 413 (812)
Q Consensus 336 ~s~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~ 413 (812)
++-... +.|...++.... ...+....-...+.|++++++..| ++-...+.|..+|+.. ......+......
T Consensus 175 ~td~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG---~~~~~~~~~~~~~ 247 (349)
T 3v64_C 175 WTDWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG---SHRKAVISQGLPH 247 (349)
T ss_dssp EEECSSSCEEEEEETTSCS----CEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS---CSCEEEECSSCSS
T ss_pred EeccCCCCEEEEEeCCCCC----cEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCC---CceEEEEeCCCCC
Confidence 776666 889888886321 122212234457899999877644 4445567899999863 1222222223445
Q ss_pred EEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 414 VTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 414 v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
..+|++. . ..++++-...+.|..++...+
T Consensus 248 P~giav~-~-~~ly~td~~~~~V~~~~~~~G 276 (349)
T 3v64_C 248 PFAITVF-E-DSLYWTDWHTKSINSANKFTG 276 (349)
T ss_dssp EEEEEEE-T-TEEEEEETTTTEEEEEETTTC
T ss_pred ceEEEEE-C-CEEEEecCCCCeEEEEEccCC
Confidence 6778773 2 356666666777888875444
No 254
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.19 E-value=0.00073 Score=65.43 Aligned_cols=209 Identities=12% Similarity=0.122 Sum_probs=129.1
Q ss_pred EcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEE
Q psy4510 268 FSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIW 347 (812)
Q Consensus 268 ~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iw 347 (812)
+.+-.+.+.+|+|+|++..++++...++.|...|+. +... ....+.+ ......|++.+++. ++++.-.++.+.++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~--~~i~l~g-~~D~EGIa~~~~g~-~~vs~E~~~~l~~~ 96 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLI--RTIPLDF-VKDLETIEYIGDNQ-FVISDERDYAIYVI 96 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEE--EEEECSS-CSSEEEEEECSTTE-EEEEETTTTEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEE--EEEecCC-CCChHHeEEeCCCE-EEEEECCCCcEEEE
Confidence 445557899999999874566678888899999987 4411 1112232 35789999998886 55665567889999
Q ss_pred ECCCCCccc--ceeec---CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-------cCCCCEE
Q psy4510 348 DTRVINTKS--CMLTL---PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-------HHTAPVT 415 (812)
Q Consensus 348 d~~~~~~~~--~~~~~---~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-------~h~~~v~ 415 (812)
++....... ....+ ..........|+|+|.++.|+++.......||.+........+..+. .+...+.
T Consensus 97 ~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S 176 (255)
T 3qqz_A 97 SLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVS 176 (255)
T ss_dssp EECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCC
T ss_pred EcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCce
Confidence 876433211 11111 12345667999999999866666665555566554211111222221 1334678
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecC-------CCceeEEEEcCCCCCEEEE
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLG-------QKEIKELHWHPQLPGTIIS 488 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~v~~~~~~p~~~~~~~~ 488 (812)
+++++|...++++.+...+.|..+|...... ..+....+ ....-.|++.+++. ++++
T Consensus 177 ~l~~dp~tg~lliLS~~s~~L~~~d~~g~~~---------------~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyIv 240 (255)
T 3qqz_A 177 GAEFNQQKNTLLVLSHESRALQEVTLVGEVI---------------GEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYIV 240 (255)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEECTTCCEE---------------EEEECSTTGGGCSSCCCSEEEEEECTTCC-EEEE
T ss_pred eEEEcCCCCeEEEEECCCCeEEEEcCCCCEE---------------EEEEcCCccCCcccccCCCCeeEECCCCC-EEEE
Confidence 9999998777777777788888998765411 11111111 12567899999974 5555
Q ss_pred EeCCCeEEE
Q psy4510 489 TANSGFNIF 497 (812)
Q Consensus 489 ~~~~~~~~~ 497 (812)
+..+-+.+|
T Consensus 241 sE~n~~y~f 249 (255)
T 3qqz_A 241 SEPNRFYRF 249 (255)
T ss_dssp ETTTEEEEE
T ss_pred cCCceEEEE
Confidence 544433333
No 255
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=98.19 E-value=0.017 Score=64.61 Aligned_cols=183 Identities=9% Similarity=-0.027 Sum_probs=117.0
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS 321 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~ 321 (812)
..+.|+..++.+. .....+. ..-....+|+|.+.+..++.+-...+.|+.+++..... ...+......
T Consensus 13 ~~~~I~~i~l~~~-------~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~----~~v~~~g~~~ 81 (628)
T 4a0p_A 13 RRADIRRISLETN-------NNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSAL----EHVVEFGLDY 81 (628)
T ss_dssp ETTEEEEEESSCT-------TCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSC
T ss_pred eCCcEEEEECCCC-------CcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCc----EEEEeCCCCC
Confidence 5677888888763 2112111 12356889999998744555656678999999876532 1112222245
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFK 399 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~ 399 (812)
...+++.+.+.+++++-...+.|.+.++..... ..+....-.....|++.|....|+... ..+.|...++.
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~----~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~d--- 154 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHR----QVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMD--- 154 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTC----EEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcE----EEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCC---
Confidence 778999888777777777788999999874221 111123335578999998655444443 35678888875
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+...-.....|++.+.+.++.++-...+.|...|+...
T Consensus 155 -G~~~~~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~ 198 (628)
T 4a0p_A 155 -GSERTTLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGL 198 (628)
T ss_dssp -SCSCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred -CCceEEEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCC
Confidence 33333333344567899999986555555566778999998764
No 256
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.15 E-value=0.00024 Score=81.97 Aligned_cols=253 Identities=11% Similarity=0.035 Sum_probs=133.5
Q ss_pred CCCC-ceEEEEeC-CCCCCeEEEec-----CCCcEEEEccCCC-CcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-
Q psy4510 174 GHLT-EGFAMDWS-STEPGVLATGD-----CKRNIHIWTPREA-GAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP- 244 (812)
Q Consensus 174 gh~~-~i~~~~~s-p~~~~~lat~~-----~dg~v~iwd~~~~-~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d- 244 (812)
+|.- .+...+|| | +|++||-+. ...+|+++|+.++ +.. ...+ ......++|+||++.|+....+
T Consensus 170 ~~~~~~~~~~~~S~P-DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l---~~~~---~~~~~~~~WspDg~~l~y~~~d~ 242 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPP-EHDLVAFSVDMSGNEVYTIEFKRISDPSQTI---ADKV---SGTNGEIVWGPDHTSLFYVTKDE 242 (751)
T ss_dssp TCSCCEEEEEEECTT-TTCEEEEEEESSSSSCEEEEEEETTCTTCCC---CCCE---EEECSCCEECSSTTEEEEEEECT
T ss_pred CCCeEEEeeeEecCC-CCCEEEEEEeCCCCceEEEEEEECCCCCEeC---Cccc---cCceeeEEEecCCCEEEEEEECC
Confidence 4443 67789999 9 999888442 2235999999887 521 1111 1124578999999988877654
Q ss_pred ----CceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccC
Q psy4510 245 ----FQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 245 ----~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
..|.++++.++ .......+. .+......+.|+|++..++++... ...|+++|+.++............
T Consensus 243 ~~~~~~v~~~~lgt~-----~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~ 317 (751)
T 2xe4_A 243 TLRENKVWRHVMGKL-----QSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR 317 (751)
T ss_dssp TCCEEEEEEEETTSC-----GGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC
T ss_pred CCCCCEEEEEECCCC-----chhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC
Confidence 25777777653 111223332 223456788999999444444432 346888888765311100111223
Q ss_pred CCCCEEEEEEcCCCCeEEEEEECC----CeEEEEECCCCCcccc-eeecCCcCCC--CeEEEEEcCCCCEEEEEeCCCcE
Q psy4510 318 HTNSVEDLQWSPGEKRVLASCSVD----LSIRIWDTRVINTKSC-MLTLPNAHTS--DVNVISWNRTEPLIVSGGDDGCI 390 (812)
Q Consensus 318 h~~~v~~~~~~p~~~~~l~s~~~d----g~i~iwd~~~~~~~~~-~~~~~~~~~~--~v~~l~~~~~~~~l~sg~~dg~i 390 (812)
.......+.|+. ++.+++....+ ..|..+++........ + + .+.. .+..+++. .+.++++...+|..
T Consensus 318 ~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~l--i--~~~~~~~l~~~~~~-~~~lv~~~~~~g~~ 391 (751)
T 2xe4_A 318 EKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQPSDWSHVL--V--DHSEDVFMESIAVR-SNYLVVAGRRAGLT 391 (751)
T ss_dssp CTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTSTTCCCCEE--E--CCCSSEEEEEEEEC-SSEEEEEEEETTEE
T ss_pred CCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCCcccceeeE--E--CCCCCcEEEEEEEE-CCEEEEEEEeCCEE
Confidence 344556666654 55455555544 3566667653211111 1 1 2223 34556655 23466777777765
Q ss_pred E--EEecCC----CCCCCceEEcccC-CCCEEEEEE----ccCCCcEEEEEECC---CCEEEEEcCCC
Q psy4510 391 H--VWDLRR----FKKGSSVATFKHH-TAPVTTVEW----HPTESSTFASGGAD---DQIALWDLAVE 444 (812)
Q Consensus 391 ~--iwd~~~----~~~~~~~~~~~~h-~~~v~~v~~----~p~~~~~l~s~~~d---g~v~iwd~~~~ 444 (812)
+ ++++.. ...+..+..+... ...+..+.+ ++++..++++.+.. ..+..+|+.+.
T Consensus 392 ~l~~~dl~~~~~~~~~g~~~~~l~l~~~~~~~~~~~~~~~~~~~~~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 392 RIWTMMADSQDGVFKAGTGLREVVMEEPIFTVHLVESQMLEYEEPTFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp EEEEEECCTTTSCCCTTTCCEECCCCCSSCEEEECGGGCCCTTCSCEEEEEEETTEEEEEEEECTTTC
T ss_pred EEEEEecccccccccCCccceEECCCCceeEEEeccCcccCCCCCEEEEEEeCCCCCCEEEEEECCCC
Confidence 4 455410 0122213333211 122444443 34555566665543 34666666554
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.15 E-value=0.0013 Score=67.17 Aligned_cols=200 Identities=10% Similarity=0.032 Sum_probs=119.1
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC--------------------CCCcEEEEEecCC
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG--------------------HLTEGFAMDWSST 283 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~l~~sp~ 283 (812)
....+++|.++++.+.++..++.|..|+..++ .+..+.. ......++++.++
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~--------~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~ 90 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNS--------GFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQ 90 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTT--------CEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETT
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCC--------ceEEEecccccccccccccccchhccccCCCCceEEEcCC
Confidence 34567888899988888888899999987653 1222211 1135789999983
Q ss_pred CCCEEEEEeCCCcEEEEeCCCCCcceeccccccC-CCCCEEEEEEcC-CCCeEEEEEEC-----------------CCeE
Q psy4510 284 EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG-HTNSVEDLQWSP-GEKRVLASCSV-----------------DLSI 344 (812)
Q Consensus 284 ~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~-h~~~v~~~~~~p-~~~~~l~s~~~-----------------dg~i 344 (812)
+ +.|..++..+.|..++..++.. ........+ .....+++++.+ +|. +.++... ++.|
T Consensus 91 ~-g~l~v~d~~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~-l~v~d~~~~~~~~~~~~~~~~~~~~g~v 167 (322)
T 2fp8_A 91 N-NQLYIVDCYYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGI-VYFTDVSTLYDDRGVQQIMDTSDKTGRL 167 (322)
T ss_dssp T-TEEEEEETTTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCC-EEEEESCSSCCTTCHHHHHHHTCCCEEE
T ss_pred C-CcEEEEECCCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCE-EEEECCcccccccccceehcccCCCceE
Confidence 3 4566665556688888765421 111111111 123578999999 887 5555432 3678
Q ss_pred EEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCC
Q psy4510 345 RIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTE 423 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~ 423 (812)
..+|..+... ..+ .......+.|+++++++.|+.+ ...+.|.+|++.....+. ...+....+ ...+++.++|
T Consensus 168 ~~~d~~~~~~----~~~-~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~-~~~~~~~~g-P~gi~~d~~G 240 (322)
T 2fp8_A 168 IKYDPSTKET----TLL-LKELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGT-AEVLVKIPN-PGNIKRNADG 240 (322)
T ss_dssp EEEETTTTEE----EEE-EEEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTC-EEEEEECSS-EEEEEECTTS
T ss_pred EEEeCCCCEE----EEe-ccCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCc-cceEEeCCC-CCCeEECCCC
Confidence 8888763321 111 1112345679999999855544 566899999987421111 122211223 7889999987
Q ss_pred CcEEEEEEC----------CCCEEEEEcC
Q psy4510 424 SSTFASGGA----------DDQIALWDLA 442 (812)
Q Consensus 424 ~~~l~s~~~----------dg~v~iwd~~ 442 (812)
. +.++... .+.|..+|..
T Consensus 241 ~-l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 241 H-FWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp C-EEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred C-EEEEecCcccccccCCCccEEEEECCC
Confidence 4 5555433 3557777754
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.14 E-value=0.0098 Score=61.34 Aligned_cols=181 Identities=10% Similarity=-0.002 Sum_probs=115.2
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
...|+..++... ....+........+++|.+....++.+-...+.|+.+++..... ............
T Consensus 52 ~~~I~~i~~~g~--------~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p~ 119 (349)
T 3v64_C 52 RIDIRQVLPHRS--------EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESPG 119 (349)
T ss_dssp BSCEEEECTTSC--------CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECSSCSCCC
T ss_pred ccceEEEeCCCC--------eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCc----eEEEeCCCCCcc
Confidence 345777776542 22333333455889999987634555555678899999876542 111222234567
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCC-EEEEEeCC-CcEEEEecCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEP-LIVSGGDD-GCIHVWDLRRFKKG 401 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~d-g~i~iwd~~~~~~~ 401 (812)
.+++.+.+.+++++-...+.|.+.++..... ..+....-...+.+++.|.+. ++++-... +.|..+++. +
T Consensus 120 glavd~~~g~ly~~d~~~~~I~~~~~dG~~~----~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d----G 191 (349)
T 3v64_C 120 GLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD----G 191 (349)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCSC----EEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT----S
T ss_pred EEEEecCCCeEEEEcCCCCeEEEEcCCCCce----EEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC----C
Confidence 8999987776777777788999999874221 112123345678999998665 44454444 788888885 3
Q ss_pred CceEEcc-cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATFK-HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~-~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+. ..-.....|+++|.+..+.++-...+.|..+|+...
T Consensus 192 ~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 192 SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp CSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 3333332 233456899999877656666566778999998754
No 259
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.10 E-value=0.0024 Score=67.06 Aligned_cols=238 Identities=11% Similarity=-0.024 Sum_probs=142.5
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~ 257 (812)
..|.+..+ .+.++++.. ..|+..++..... . .+......+.+++|.+.+..|..+. ..+.|..+++...
T Consensus 79 ~~C~~~~~-~~~l~~~~~--~~I~~i~~~~~~~----~-~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~-- 148 (386)
T 3v65_B 79 RSCKALGP-EPVLLFANR--IDIRQVLPHRSEY----T-LLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGS-- 148 (386)
T ss_dssp SCEEECSS-CCEEEEECB--SCEEEECTTSCCC----E-EEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--
T ss_pred CeECCccc-cceeEeecC--ccceeeccCCCcE----E-EEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCC--
Confidence 34555555 444444433 4688888776542 1 1222334578999998776666554 5678888888763
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.....+.........|++.+.+..+.++-...+.|.+.++..... ...+.........+++.|.+..++++
T Consensus 149 -----~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~----~~l~~~~l~~P~giavdp~~g~ly~t 219 (386)
T 3v65_B 149 -----NVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHR----KVLLWQSLEKPRAIALHPMEGTIYWT 219 (386)
T ss_dssp -----CEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSC----EEEECSSCSCEEEEEEETTTTEEEEE
T ss_pred -----CcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCce----EEeecCCCCCCcEEEEEcCCCeEEEe
Confidence 211222222234567888876635556656677888888875431 11122233567999999988877776
Q ss_pred EECC-CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEE-EEEeCCCcEEEEecCCCCCCCceEEcccCCCCEE
Q psy4510 338 CSVD-LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLI-VSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVT 415 (812)
Q Consensus 338 ~~~d-g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l-~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~ 415 (812)
-... +.|...++.... ...+....-...+.|+++|++..| ++-+..+.|..+|+.. ......+........
T Consensus 220 d~~~~~~I~r~~~dG~~----~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG---~~~~~~~~~~~~~P~ 292 (386)
T 3v65_B 220 DWGNTPRIEASSMDGSG----RRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDG---SHRKAVISQGLPHPF 292 (386)
T ss_dssp ECSSSCEEEEEETTSCS----CEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTS---CSCEEEECSSCSSEE
T ss_pred ccCCCCEEEEEeCCCCC----cEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCC---CeeEEEEECCCCCce
Confidence 6555 788888876321 111212233457899999876644 4445567899999863 222222232344567
Q ss_pred EEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 416 TVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 416 ~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+|++. . ..++++-...+.|..++...+
T Consensus 293 giav~-~-~~ly~td~~~~~V~~~~~~~G 319 (386)
T 3v65_B 293 AITVF-E-DSLYWTDWHTKSINSANKFTG 319 (386)
T ss_dssp EEEEE-T-TEEEEEETTTTEEEEEETTTC
T ss_pred EEEEE-C-CEEEEeeCCCCeEEEEECCCC
Confidence 78873 3 356666666778888885444
No 260
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=0.00013 Score=70.17 Aligned_cols=183 Identities=9% Similarity=-0.013 Sum_probs=114.4
Q ss_pred eEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCCCC
Q psy4510 179 GFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRGKG 257 (812)
Q Consensus 179 i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~~~ 257 (812)
...+.|+. +.+..+.+.+|.|+++|+.+++..... +.. ........++++.|..+ -.++.+.++|..+.
T Consensus 57 tqGL~~~~--~~Ly~stG~~g~v~~iD~~Tgkv~~~~---l~~---~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl-- 126 (268)
T 3nok_A 57 TQGLVFHQ--GHFFESTGHQGTLRQLSLESAQPVWME---RLG---NIFAEGLASDGERLYQLTWTEGLLFTWSGMPP-- 126 (268)
T ss_dssp EEEEEEET--TEEEEEETTTTEEEECCSSCSSCSEEE---ECT---TCCEEEEEECSSCEEEEESSSCEEEEEETTTT--
T ss_pred cceEEEEC--CEEEEEcCCCCEEEEEECCCCcEEeEE---CCC---CcceeEEEEeCCEEEEEEccCCEEEEEECCcC--
Confidence 45777754 567778888899999999998843222 222 23332222345555444 47899999999885
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC---CCEEEEEEcCCCCeE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT---NSVEDLQWSPGEKRV 334 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~~ 334 (812)
+.+.++.. ..+.++|+ +++ ..|+.+..++.|.++|..+.+..... ....+. ..++.+.|. +|. +
T Consensus 127 -----~~~~ti~~-~~eGwGLt--~Dg-~~L~vSdGs~~l~~iDp~T~~v~~~I--~V~~~g~~v~~lNeLe~~-dG~-l 193 (268)
T 3nok_A 127 -----QRERTTRY-SGEGWGLC--YWN-GKLVRSDGGTMLTFHEPDGFALVGAV--QVKLRGQPVELINELECA-NGV-I 193 (268)
T ss_dssp -----EEEEEEEC-SSCCCCEE--EET-TEEEEECSSSEEEEECTTTCCEEEEE--ECEETTEECCCEEEEEEE-TTE-E
T ss_pred -----cEEEEEeC-CCceeEEe--cCC-CEEEEECCCCEEEEEcCCCCeEEEEE--EeCCCCcccccccccEEe-CCE-E
Confidence 66667664 34445565 456 56666667899999999887632111 111122 245778887 564 7
Q ss_pred EEEEECCCeEEEEECCCCCcccceee--c-------CCcCCCCeEEEEEcCCCC-EEEEE
Q psy4510 335 LASCSVDLSIRIWDTRVINTKSCMLT--L-------PNAHTSDVNVISWNRTEP-LIVSG 384 (812)
Q Consensus 335 l~s~~~dg~i~iwd~~~~~~~~~~~~--~-------~~~~~~~v~~l~~~~~~~-~l~sg 384 (812)
++....+..|.+.|.+++.-...+.. + ......-.+.|+|+|+++ +++||
T Consensus 194 yanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTG 253 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTG 253 (268)
T ss_dssp EEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEE
T ss_pred EEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeC
Confidence 77776788999999986543221111 0 011224579999999876 55555
No 261
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.09 E-value=0.00016 Score=69.48 Aligned_cols=184 Identities=8% Similarity=0.016 Sum_probs=114.3
Q ss_pred eeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC
Q psy4510 226 AEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA 305 (812)
Q Consensus 226 V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~ 305 (812)
...|.|+ .+.+..+.+.+|.|+++|++++ +.+..+....--...+++. +..+.+..-.++.+.++|..+.
T Consensus 57 tqGL~~~-~~~Ly~stG~~g~v~~iD~~Tg-------kv~~~~l~~~~FgeGit~~--g~~Ly~ltw~~~~v~V~D~~Tl 126 (268)
T 3nok_A 57 TQGLVFH-QGHFFESTGHQGTLRQLSLESA-------QPVWMERLGNIFAEGLASD--GERLYQLTWTEGLLFTWSGMPP 126 (268)
T ss_dssp EEEEEEE-TTEEEEEETTTTEEEECCSSCS-------SCSEEEECTTCCEEEEEEC--SSCEEEEESSSCEEEEEETTTT
T ss_pred cceEEEE-CCEEEEEcCCCCEEEEEECCCC-------cEEeEECCCCcceeEEEEe--CCEEEEEEccCCEEEEEECCcC
Confidence 4577886 3566677778888999999987 4455542111122335554 4356666667899999999987
Q ss_pred CcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-cCCCCeEEEEEcCCCCEEEEE
Q psy4510 306 GAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-AHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 306 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~~~~~v~~l~~~~~~~~l~sg 384 (812)
+. ...+... ..-..++ ++++.++++ ..++.|.++|..+......+..-.. ..-..++.+.|. +|.+++..
T Consensus 127 ~~----~~ti~~~-~eGwGLt--~Dg~~L~vS-dGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 127 QR----ERTTRYS-GEGWGLC--YWNGKLVRS-DGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EE----EEEEECS-SCCCCEE--EETTEEEEE-CSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred cE----EEEEeCC-CceeEEe--cCCCEEEEE-CCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 62 3333221 1123444 457754554 4689999999986443322221101 111245778887 67666666
Q ss_pred eCCCcEEEEecCCCCCCCceEEcccC-------------CCCEEEEEEccCCCcEEEEEE
Q psy4510 385 GDDGCIHVWDLRRFKKGSSVATFKHH-------------TAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 385 ~~dg~i~iwd~~~~~~~~~~~~~~~h-------------~~~v~~v~~~p~~~~~l~s~~ 431 (812)
-.+..|.+.|.+ +++.+..+... ..-.+.|+++|++.+++++|-
T Consensus 198 w~s~~I~vIDp~---TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 198 WHSSDVLEIDPA---TGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp TTCSEEEEECTT---TCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CCCCeEEEEeCC---CCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 578899999998 46655554321 235689999998877777663
No 262
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=98.09 E-value=0.00018 Score=81.88 Aligned_cols=116 Identities=15% Similarity=0.108 Sum_probs=68.4
Q ss_pred EEEEcC-CCCeEEEEEECCC-----------eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeC-CCcE
Q psy4510 324 DLQWSP-GEKRVLASCSVDL-----------SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGD-DGCI 390 (812)
Q Consensus 324 ~~~~~p-~~~~~l~s~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~-dg~i 390 (812)
.+++.| +++ +++.|+.+. .+.+||..+.. ...+..+...+.....++++..++.+++.|+. ++.+
T Consensus 190 ~~av~~~~g~-l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~-w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v 267 (656)
T 1k3i_A 190 AAAIEPTSGR-VLMWSSYRNDAFGGSPGGITLTSSWDPSTGI-VSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKT 267 (656)
T ss_dssp EEEEETTTTE-EEEEEECCCTTTCSCCCSEEEEEEECTTTCC-BCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCE
T ss_pred eEEEEecCCE-EEEEecccccccccCCCCeEEEEEEeCCCCc-EEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCce
Confidence 556677 555 788877543 58899988643 22223332334444456778889999999884 5689
Q ss_pred EEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEE-CC-----CCEEEEEcCCC
Q psy4510 391 HVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGG-AD-----DQIALWDLAVE 444 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~-~d-----g~v~iwd~~~~ 444 (812)
.+||..... ...+..+..... -.+++..+++ ++++.|| .+ ..+.+||..+.
T Consensus 268 ~~yd~~t~~-W~~~~~~~~~R~-~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 268 SLYDSSSDS-WIPGPDMQVARG-YQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEEGGGTE-EEECCCCSSCCS-SCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EEecCcCCc-eeECCCCCcccc-ccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 999987421 111111221111 1344555665 5788887 34 45777777654
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.07 E-value=0.0092 Score=62.53 Aligned_cols=182 Identities=10% Similarity=-0.009 Sum_probs=115.0
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+........+++|.+.+..++.+-...+.|+.+++..... ...+.......
T Consensus 94 ~~~~I~~i~~~~~--------~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~----~~~~~~~~~~p 161 (386)
T 3v65_B 94 NRIDIRQVLPHRS--------EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNV----EEVVSTGLESP 161 (386)
T ss_dssp CBSCEEEECTTSC--------CCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCE----EEEECSSCSCC
T ss_pred cCccceeeccCCC--------cEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCc----EEEEeCCCCCc
Confidence 3456777777653 22333333456889999987634555555678899999876542 11122222345
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEE-EEeCC-CcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIV-SGGDD-GCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~-sg~~d-g~i~iwd~~~~~~ 400 (812)
..+++.+.+..++++-...+.|.+.++.... ...+........+.|++.|.+..|+ +-... +.|..+++..
T Consensus 162 ~glavd~~~g~lY~~d~~~~~I~~~~~dg~~----~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG--- 234 (386)
T 3v65_B 162 GGLAVDWVHDKLYWTDSGTSRIEVANLDGAH----RKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG--- 234 (386)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEECBTTSCS----CEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS---
T ss_pred cEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc----eEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC---
Confidence 7889998777677777778889888876321 1112123335678999998766444 44344 7788888852
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+ ...-.....|+|+|.+..+.++-+..+.|..+|+...
T Consensus 235 -~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 235 -SGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp -CSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred -CCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 222222 2233457899999877666666666778999988654
No 264
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.02 E-value=9.7e-05 Score=71.04 Aligned_cols=199 Identities=14% Similarity=0.112 Sum_probs=118.2
Q ss_pred CCccCcCCCCCc--eEEEEeCCCCCCeEEEecCCC--cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee
Q psy4510 167 PPLFSFSGHLTE--GFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD 242 (812)
Q Consensus 167 ~~i~~~~gh~~~--i~~~~~sp~~~~~lat~~~dg--~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~ 242 (812)
+.+..+ .|... ...+.|+ ++.+..+.|.+| .|+++|+.+++..... .+. .........++++.|..+.
T Consensus 32 ~vv~~~-phd~~~ftqGL~~~--~~~LyestG~~g~S~v~~vD~~Tgkv~~~~--~l~---~~~FgeGit~~g~~ly~lt 103 (262)
T 3nol_A 32 QIVHSY-PHDTKAFTEGFFYR--NGYFYESTGLNGRSSIRKVDIESGKTLQQI--ELG---KRYFGEGISDWKDKIVGLT 103 (262)
T ss_dssp EEEEEE-ECCTTCEEEEEEEE--TTEEEEEEEETTEEEEEEECTTTCCEEEEE--ECC---TTCCEEEEEEETTEEEEEE
T ss_pred EEEEEe-cCCCCcccceEEEE--CCEEEEECCCCCCceEEEEECCCCcEEEEE--ecC---CccceeEEEEeCCEEEEEE
Confidence 344444 45443 4678886 456666777665 8999999998743211 122 2333322333455555554
Q ss_pred -CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCC-C
Q psy4510 243 -DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-N 320 (812)
Q Consensus 243 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~-~ 320 (812)
.++.+.++|..+. +.+.++.. ......++ +++ ..|+.++.++.|.++|..+.+..........+.. .
T Consensus 104 w~~~~v~v~D~~t~-------~~~~ti~~-~~eG~glt--~dg-~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~ 172 (262)
T 3nol_A 104 WKNGLGFVWNIRNL-------RQVRSFNY-DGEGWGLT--HND-QYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELP 172 (262)
T ss_dssp SSSSEEEEEETTTC-------CEEEEEEC-SSCCCCEE--ECS-SCEEECCSSSEEEEECTTTCSEEEEEECEETTEECC
T ss_pred eeCCEEEEEECccC-------cEEEEEEC-CCCceEEe--cCC-CEEEEECCCCeEEEEcCCCCeEEEEEEeccCCcccc
Confidence 6889999999885 66777764 23444555 456 4555555578899999988763211111111111 3
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--cC------CcCCCCeEEEEEcCCCCEEEEEeC
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--LP------NAHTSDVNVISWNRTEPLIVSGGD 386 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~------~~~~~~v~~l~~~~~~~~l~sg~~ 386 (812)
.++.+.|. +|. +++..-.+..|.+.|.+++.-...+.. +. .....-.+.|+|+|+++.|+..+.
T Consensus 173 ~lNELe~~-~G~-lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 173 ELNELEWV-DGE-IFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp CEEEEEEE-TTE-EEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred ccceeEEE-CCE-EEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 45678887 564 777776788999999986543221111 00 011235699999999885555553
No 265
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.99 E-value=0.012 Score=60.14 Aligned_cols=240 Identities=10% Similarity=0.087 Sum_probs=126.4
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+.++.|.+ .+..+|+| ..|.| +...+.++.+.............+.+|+|.+ +. +..++..+.|.. ..+.+.
T Consensus 36 ~~~~~v~~~~-~~~~~~~G-~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~-~~-~~~~g~~g~i~~-S~DgG~ 109 (327)
T 2xbg_A 36 ATILDMSFID-RHHGWLVG-VNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQG-NE-GWIVGEPPIMLH-TTDGGQ 109 (327)
T ss_dssp SCEEEEEESS-SSCEEEEE-TTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEET-TE-EEEEEETTEEEE-ESSTTS
T ss_pred CcEEEEEECC-CCcEEEEc-CCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecC-Ce-EEEEECCCeEEE-ECCCCC
Confidence 4689999987 77777755 46655 3334445544333222223455789999986 44 444455564443 222221
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
..+.+.....+.+.+..+.+.+++ ..++.+ .+|.|.. ....+..|.... ..+...+..+.+.|++. +++
T Consensus 110 ----tW~~~~~~~~~~~~~~~i~~~~~~-~~~~~~-~~g~v~~-S~DgG~tW~~~~---~~~~~~~~~~~~~~~~~-~~~ 178 (327)
T 2xbg_A 110 ----SWSQIPLDPKLPGSPRLIKALGNG-SAEMIT-NVGAIYR-TKDSGKNWQALV---QEAIGVMRNLNRSPSGE-YVA 178 (327)
T ss_dssp ----SCEECCCCTTCSSCEEEEEEEETT-EEEEEE-TTCCEEE-ESSTTSSEEEEE---CSCCCCEEEEEECTTSC-EEE
T ss_pred ----CceECccccCCCCCeEEEEEECCC-CEEEEe-CCccEEE-EcCCCCCCEEee---cCCCcceEEEEEcCCCc-EEE
Confidence 111111111233457788877665 455555 4565432 223344454432 23456789999999876 455
Q ss_pred EEECCCeEEE-EECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc-ccCCCCE
Q psy4510 337 SCSVDLSIRI-WDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF-KHHTAPV 414 (812)
Q Consensus 337 s~~~dg~i~i-wd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~-~~h~~~v 414 (812)
.+ ..|.+.. +|-. +..-..+ .......+..+.+.+++.+++. +.+|.+.+.+....++-..+..- ..+...+
T Consensus 179 ~g-~~G~~~~S~d~g-G~tW~~~---~~~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~ 252 (327)
T 2xbg_A 179 VS-SRGSFYSTWEPG-QTAWEPH---NRTTSRRLHNMGFTPDGRLWMI-VNGGKIAFSDPDNSENWGELLSPLRRNSVGF 252 (327)
T ss_dssp EE-TTSSEEEEECTT-CSSCEEE---ECCSSSCEEEEEECTTSCEEEE-ETTTEEEEEETTEEEEECCCBCTTSSCCSCE
T ss_pred EE-CCCcEEEEeCCC-CCceeEC---CCCCCCccceeEECCCCCEEEE-eCCceEEEecCCCCCeeEeccCCcccCCcce
Confidence 54 4454443 3321 1122222 1234567899999998876544 45787777642110011111110 0123458
Q ss_pred EEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 415 TTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 415 ~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.++.+.+++ .++++ +.++.| ++...
T Consensus 253 ~~v~~~~~~-~~~~~-g~~g~i-~~S~D 277 (327)
T 2xbg_A 253 LDLAYRTPN-EVWLA-GGAGAL-LCSQD 277 (327)
T ss_dssp EEEEESSSS-CEEEE-ESTTCE-EEESS
T ss_pred EEEEecCCC-EEEEE-eCCCeE-EEeCC
Confidence 899998864 45554 456766 34333
No 266
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.96 E-value=0.0075 Score=58.31 Aligned_cols=207 Identities=12% Similarity=0.169 Sum_probs=128.8
Q ss_pred cccCCCCCCeeeeeEcCCCCcEEE-eeCCCceEEeeCCCCCCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeCC
Q psy4510 217 KPLGGHTNSAEDLQWSDLKTALQT-VDDPFQLAEHNKKRGKGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDCK 294 (812)
Q Consensus 217 ~~l~~h~~~V~~l~~s~~~~~l~s-~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~d 294 (812)
+.+.+-...+..++|+|++..|.+ ...++.|...|.. + +.+.++. +-.....+|++.+++ .++++.-.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g-------~v~~~i~l~g~~D~EGIa~~~~g-~~~vs~E~~ 90 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-G-------DLIRTIPLDFVKDLETIEYIGDN-QFVISDERD 90 (255)
T ss_dssp EECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-C-------CEEEEEECSSCSSEEEEEECSTT-EEEEEETTT
T ss_pred eECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-C-------CEEEEEecCCCCChHHeEEeCCC-EEEEEECCC
Confidence 466676678999999998776665 5577788888876 3 4444442 112567889998887 565665567
Q ss_pred CcEEEEeCCCCCc-ceecccc--c--cCCCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCcccceeec------C
Q psy4510 295 RNIHIWTPREAGA-WQVDQKP--L--VGHTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINTKSCMLTL------P 362 (812)
Q Consensus 295 g~i~vwd~~~~~~-~~~~~~~--~--~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~------~ 362 (812)
+.+.++++..... +...... + .........|+|.|.++.++++.-.+. .|..|+ .......+... .
T Consensus 91 ~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~--g~~~~~~l~i~~~~~~~~ 168 (255)
T 3qqz_A 91 YAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN--GLLSSNELHISKDKALQR 168 (255)
T ss_dssp TEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE--STTCSSCCEEEECHHHHH
T ss_pred CcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc--ccccCCceeeecchhhcc
Confidence 8899998876653 1111111 1 123456799999999987666555544 455554 11011111111 0
Q ss_pred CcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcccCC---------CCEEEEEEccCCCcEEEEEEC
Q psy4510 363 NAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFKHHT---------APVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 363 ~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~---------~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..+...+.+++++|... +++....++.|.++|.. ++.+..+.-.. ..--.|+|.++| ++.+ .+.
T Consensus 169 ~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~----g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G-~lyI-vsE 242 (255)
T 3qqz_A 169 QFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV----GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG-NIYI-VSE 242 (255)
T ss_dssp TCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT----CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC-CEEE-EET
T ss_pred ccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC----CCEEEEEEcCCccCCcccccCCCCeeEECCCC-CEEE-EcC
Confidence 12345688999999765 66667777889999985 44544443221 256899999997 4444 466
Q ss_pred CCCEEEEE
Q psy4510 433 DDQIALWD 440 (812)
Q Consensus 433 dg~v~iwd 440 (812)
-+.+..+.
T Consensus 243 ~n~~y~f~ 250 (255)
T 3qqz_A 243 PNRFYRFT 250 (255)
T ss_dssp TTEEEEEE
T ss_pred CceEEEEE
Confidence 66555543
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.94 E-value=0.0018 Score=69.04 Aligned_cols=245 Identities=10% Similarity=0.040 Sum_probs=139.1
Q ss_pred CceEEEEeCCC--CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEE
Q psy4510 177 TEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF-----QLAE 249 (812)
Q Consensus 177 ~~i~~~~~sp~--~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~v 249 (812)
+....++|+|. ++++.++-.. +.|+.++..++. ...+.........++|+++++ |..+...+ .+..
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~D~~-~~I~~id~~~g~-----v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWVGQR-DAFRHVDFVNQY-----VDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEECBT-SCEEEEETTTTE-----EEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEE
T ss_pred CCCceEEEccccCCCEEEEEeCC-CCEEEEECCCCE-----EEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEE
Confidence 45678999983 2555554443 889999986654 223333445688999999999 55444321 1233
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.+...+ ......+. .......+++.|....+.++-..++.|+.++..++..... ... .+....-..++|+|
T Consensus 212 ~~~~~~------~~~~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~-~~~-~~~~~~~~~ia~dp 282 (433)
T 4hw6_A 212 FTRASG------FTERLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEE-EVM-MDTKGSNFHIVWHP 282 (433)
T ss_dssp ECGGGT------TCCEEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEE-EEE-CSCCSSCEEEEECT
T ss_pred EECCCC------eecccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEE-Eec-cCCCCCcccEEEeC
Confidence 332221 11111221 2234567889994425555555677899999876542000 111 11122335799999
Q ss_pred CCCeEEEEEECCCeEEEEECCCCCc-ccceeecC--------------CcCCCCeEEEEE---------cCCCCEEEEEe
Q psy4510 330 GEKRVLASCSVDLSIRIWDTRVINT-KSCMLTLP--------------NAHTSDVNVISW---------NRTEPLIVSGG 385 (812)
Q Consensus 330 ~~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~--------------~~~~~~v~~l~~---------~~~~~~l~sg~ 385 (812)
+++.++++-...+.|+.++...... ......+. .+.-.....+++ .+++.++++-.
T Consensus 283 dG~~LYvad~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~ 362 (433)
T 4hw6_A 283 TGDWAYIIYNGKHCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDR 362 (433)
T ss_dssp TSSEEEEEETTTTEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEET
T ss_pred CCCEEEEEeCCCCEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEEC
Confidence 9987677777788999988652111 00000110 001123567888 67777777777
Q ss_pred CCCcEEEEecCCCCCCCceEEcccC------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKHH------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
..+.|+.++.. + .+.++.+. -.....|++.|.+..++++=...++|+.++++
T Consensus 363 ~n~~I~~~~~~----G-~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 363 DSHTVRVLTPE----G-RVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TTTEEEEECTT----S-EEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEECCC----C-CEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 77889998852 3 23332211 12367889984444565655566788887764
No 268
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.92 E-value=0.0004 Score=66.17 Aligned_cols=185 Identities=11% Similarity=0.063 Sum_probs=111.8
Q ss_pred CeeeeeEcCCCCcEEEeeCC--CceEEeeCCCCCCCCCCCCCceEEcCCCC-cEEEEEecCCCCCEEEEEeCCCcEEEEe
Q psy4510 225 SAEDLQWSDLKTALQTVDDP--FQLAEHNKKRGKGPGIPTPPLFSFSGHLT-EGFAMDWSSTEPGVLATGDCKRNIHIWT 301 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d--~~i~vwd~~~~~~~~~~~~~~~~~~~h~~-~v~~l~~sp~~~~~l~sg~~dg~i~vwd 301 (812)
-...|.|++ +.+..+.+.. ..|+++|+.++ +.+.++.-... -...++.. +..+....-.++.+.++|
T Consensus 22 ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tg-------kv~~~~~l~~~~fgeGi~~~--~~~ly~ltw~~~~v~v~D 91 (243)
T 3mbr_X 22 FTEGLFYLR-GHLYESTGETGRSSVRKVDLETG-------RILQRAEVPPPYFGAGIVAW--RDRLIQLTWRNHEGFVYD 91 (243)
T ss_dssp CEEEEEEET-TEEEEEECCTTSCEEEEEETTTC-------CEEEEEECCTTCCEEEEEEE--TTEEEEEESSSSEEEEEE
T ss_pred ccccEEEEC-CEEEEECCCCCCceEEEEECCCC-------CEEEEEeCCCCcceeEEEEe--CCEEEEEEeeCCEEEEEE
Confidence 455788876 5555666654 48999999986 55555443221 22344443 425555566789999999
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCc-CCCCeEEEEEcCCCCE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA-HTSDVNVISWNRTEPL 380 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~-~~~~v~~l~~~~~~~~ 380 (812)
..+.+ ....+... ..-..++ +++..+++|- .++.|.++|..+......+..-..+ .-..++-+.|. +|.+
T Consensus 92 ~~tl~----~~~ti~~~-~~Gwglt--~dg~~L~vSd-gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~l 162 (243)
T 3mbr_X 92 LATLT----PRARFRYP-GEGWALT--SDDSHLYMSD-GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGEL 162 (243)
T ss_dssp TTTTE----EEEEEECS-SCCCEEE--ECSSCEEEEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEE
T ss_pred CCcCc----EEEEEeCC-CCceEEe--eCCCEEEEEC-CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEE
Confidence 98876 33333321 1224444 4566555554 5889999999864432222211011 11346777776 6666
Q ss_pred EEEEeCCCcEEEEecCCCCCCCceEEccc-------------CCCCEEEEEEccCCCcEEEEEE
Q psy4510 381 IVSGGDDGCIHVWDLRRFKKGSSVATFKH-------------HTAPVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 381 l~sg~~dg~i~iwd~~~~~~~~~~~~~~~-------------h~~~v~~v~~~p~~~~~l~s~~ 431 (812)
++..-.+..|.+.|.+ +++.+..+.. -....+.|+++|.+.+++++|-
T Consensus 163 yanvw~s~~I~vIDp~---tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 163 LANVWLTSRIARIDPA---SGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp EEEETTTTEEEEECTT---TCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCCeEEEEECC---CCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 6666567899999998 4555555431 1235689999998766666653
No 269
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.92 E-value=0.004 Score=63.69 Aligned_cols=237 Identities=9% Similarity=0.028 Sum_probs=128.8
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGK 256 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~ 256 (812)
..+.++.|.| +..++. +..|.|.. ..+.++.+.... ....+...+..+++.++++.++.+. ++.|.. ..+.+.
T Consensus 80 ~~~~~i~~~~--~~~~~~-g~~g~i~~-S~DgG~tW~~~~-~~~~~~~~~~~i~~~~~~~~~~~~~-~g~v~~-S~DgG~ 152 (327)
T 2xbg_A 80 YRFNSVSFQG--NEGWIV-GEPPIMLH-TTDGGQSWSQIP-LDPKLPGSPRLIKALGNGSAEMITN-VGAIYR-TKDSGK 152 (327)
T ss_dssp CEEEEEEEET--TEEEEE-EETTEEEE-ESSTTSSCEECC-CCTTCSSCEEEEEEEETTEEEEEET-TCCEEE-ESSTTS
T ss_pred ccEEEEEecC--CeEEEE-ECCCeEEE-ECCCCCCceECc-cccCCCCCeEEEEEECCCCEEEEeC-CccEEE-EcCCCC
Confidence 3577888876 344444 44564443 333344433221 1112345577888877777666554 454322 111221
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEE
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLA 336 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~ 336 (812)
.=.....++...+.++++.|++ .+++.+. .|.+..-.-..+..|.... ......+..+.+.+++. +.
T Consensus 153 ------tW~~~~~~~~~~~~~~~~~~~~-~~~~~g~-~G~~~~S~d~gG~tW~~~~---~~~~~~~~~~~~~~~g~--~~ 219 (327)
T 2xbg_A 153 ------NWQALVQEAIGVMRNLNRSPSG-EYVAVSS-RGSFYSTWEPGQTAWEPHN---RTTSRRLHNMGFTPDGR--LW 219 (327)
T ss_dssp ------SEEEEECSCCCCEEEEEECTTS-CEEEEET-TSSEEEEECTTCSSCEEEE---CCSSSCEEEEEECTTSC--EE
T ss_pred ------CCEEeecCCCcceEEEEEcCCC-cEEEEEC-CCcEEEEeCCCCCceeECC---CCCCCccceeEECCCCC--EE
Confidence 1111223455678999999986 5666654 4555443211133343321 23456789999999886 44
Q ss_pred EEECCCeEEEEECCCCCcccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCC
Q psy4510 337 SCSVDLSIRIWDTRVINTKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTA 412 (812)
Q Consensus 337 s~~~dg~i~iwd~~~~~~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~ 412 (812)
.++.+|.+++.+...+.+-..+ ... ..+...+.++.+.+++.++++|. +|.| .+... .+..-..+. ....
T Consensus 220 ~~~~~G~~~~s~~D~G~tW~~~-~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~D---gG~tW~~~~~~~~~~~ 293 (327)
T 2xbg_A 220 MIVNGGKIAFSDPDNSENWGEL-LSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQD---GGQTWQQDVDVKKVPS 293 (327)
T ss_dssp EEETTTEEEEEETTEEEEECCC-BCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESS---TTSSCEECGGGTTSSS
T ss_pred EEeCCceEEEecCCCCCeeEec-cCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCC---CCcccEEcCccCCCCC
Confidence 5567788887743211111111 111 11234688999998777776655 6666 33433 233333333 2345
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.+.++.|.+++ .+++++.+|.|..++-
T Consensus 294 ~~~~v~~~~~~--~~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 294 NFYKILFFSPD--QGFILGQKGILLRYVT 320 (327)
T ss_dssp CCCEEEEEETT--EEEEECSTTEEEEECC
T ss_pred CeEEEEEECCC--ceEEEcCCceEEEEcC
Confidence 67888887543 5777778898776654
No 270
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.89 E-value=0.096 Score=62.74 Aligned_cols=511 Identities=9% Similarity=0.034 Sum_probs=242.0
Q ss_pred CCceEEEEeCC--CCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCC
Q psy4510 176 LTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKK 253 (812)
Q Consensus 176 ~~~i~~~~~sp--~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~ 253 (812)
...+|++.... ....+|+.+..+.+ +|+.+............+..-...+.+-.+ .++ .++-.. ...|++.+..
T Consensus 425 v~~iWtl~~~~~~~~~~yLvlS~~~~T-~Vl~i~~e~veev~~~gf~~~~~TL~~~~l-~~~-~ivQVt-~~~Irli~~~ 500 (1158)
T 3ei3_A 425 IKGLWPLRSDPNRETDDTLVLSFVGQT-RVLMLNGEEVEETELMGFVDDQQTFFCGNV-AHQ-QLIQIT-SASVRLVSQE 500 (1158)
T ss_dssp CCEEEEECCCSSCSSCCEEEEEETTEE-EEEEEETTEEEEECCTTCCSSSCEEEEEEE-TTT-EEEEEE-SSCEEEEESS
T ss_pred ccEEEEEeecCCCCCCCEEEEECCCCe-EEEEEeCCcccccccccccCCCCcEEEEEc-CCC-eEEEEe-cCEEEEEECC
Confidence 46788887542 14567887776655 677653321111001111111111111111 111 222222 1234555543
Q ss_pred CCCCCCCCCCCceEEcCC-CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC-
Q psy4510 254 RGKGPGIPTPPLFSFSGH-LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE- 331 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h-~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~- 331 (812)
.. ..+..+... ...|...+.+. ..++.++ .+.+.++.+..+.... ... ..-...|.|+++.|..
T Consensus 501 ~~-------~~~~~w~~p~~~~I~~As~n~---~~vvva~-g~~l~~fel~~~~L~~--~~~-~~l~~evscl~i~~~~~ 566 (1158)
T 3ei3_A 501 PK-------ALVSEWKEPQAKNISVASCNS---SQVVVAV-GRALYYLQIHPQELRQ--ISH-TEMEHEVACLDITPLGD 566 (1158)
T ss_dssp SC-------CEEEEECCTTCCCCCEEEECS---SEEEEEE-TTEEEEEEEETTEEEE--EEE-EECSSCEEEEECCCCSS
T ss_pred CC-------eEEEEEECCCCCEEEEEEeCC---CEEEEEE-CCEEEEEEeeCCceee--ecc-cCCCCceEEEEeecCCC
Confidence 31 233334322 23465656553 3444444 5788888877543111 111 1234579999998643
Q ss_pred ----CeEEEEEEC-CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC--CCCEEEEEeCCCcEEEEecCCCCCCCce
Q psy4510 332 ----KRVLASCSV-DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR--TEPLIVSGGDDGCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 332 ----~~~l~s~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~--~~~~l~sg~~dg~i~iwd~~~~~~~~~~ 404 (812)
..+++.|.. |++|+|+.+...... ....+ .......++.+.. ...+|..|-.||.+.-+.+.. .++...
T Consensus 567 ~~~~s~~~aVg~~~d~tv~I~sL~~l~~~-~~~~L--~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~-~tg~l~ 642 (1158)
T 3ei3_A 567 SNGLSPLCAIGLWTDISARILKLPSFELL-HKEML--GGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI-ETGLLS 642 (1158)
T ss_dssp STTCCSEEEEEETTTTEEEEEETTTCCEE-EEEEC--CSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT-TTCCEE
T ss_pred CcccccEEEEEECCCCEEEEEECCCCCeE-EEEEC--CCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC-CCCccc
Confidence 247888886 999999999743211 11222 1122334444332 234889999999987776642 122221
Q ss_pred E---EcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeE-EEEcC
Q psy4510 405 A---TFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKE-LHWHP 480 (812)
Q Consensus 405 ~---~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~~p 480 (812)
. .+-+ ..++.=..+...+...+++.| ++...++--. . .+.+....-..+.. ..|+.
T Consensus 643 d~r~~~LG-~~pv~L~~~~~~~~~~V~a~s-~rp~liy~~~-~-----------------~l~~s~l~~~~v~~~~~F~s 702 (1158)
T 3ei3_A 643 DRKKVTLG-TQPTVLRTFRSLSTTNVFACS-DRPTVIYSSN-H-----------------KLVFSNVNLKEVNYMCPLNS 702 (1158)
T ss_dssp EEEEEECC-SSCCEEEEEESSSCEEEEEES-SSCEEEEESS-S-----------------SEEEEEBSSSCCCEEEEECC
T ss_pred cceeEEcC-CCceEEEEEeeCCceeEEEEC-CCCEEEEEcC-C-----------------ceEEeccChHHhceEeccCc
Confidence 1 1222 334433334333322333333 3444444322 1 22233222223322 23433
Q ss_pred C-CCCEEEEEeCCCeEEEEeCCCCCcccEEeecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeeccc-Ccc-------
Q psy4510 481 Q-LPGTIISTANSGFNIFRTISDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSN-LTS------- 551 (812)
Q Consensus 481 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~-l~~------- 551 (812)
. .+.-++....+.+.++......... ....+-...+..++++|......+.+... ....... ...
T Consensus 703 e~~~~g~v~~~~~~LrI~~i~~~~~~~-~~~ipL~~Tprri~y~~~~~~~~v~~~~~-----~~~~~~~~~~~~~~~~~~ 776 (1158)
T 3ei3_A 703 DGYPDSLALANNSTLTIGTIDEIQKLH-IRTVPLYESPRKICYQEVSQCFGVLSSRI-----EVQDTSGGTTALRPSAST 776 (1158)
T ss_dssp SSSTTEEEEECSSCEEEEEECCSSSEE-EEEEECSSEEEEEEEEGGGTEEEEEEEEE-----EEECSSSSEEESSCCHHH
T ss_pred ccCCCcEEEEcCCceEEEEecccCCee-EEEEeCCCCceEEEEcCCCCEEEEEEEec-----cccccccccchhhhhhhh
Confidence 2 3455666667778887754332211 12222335788899999855444444321 0000000 000
Q ss_pred -----cccccc--cccccccCC--CC---CCccccCCCccceEE----ecccceEEEEEEe---cc-CCeEEEEeec---
Q psy4510 552 -----TEEDNE--RELEDDESE--GS---GDEDRRKDPVMNSYF----IRHRGCINRVRTC---QY-GSTTLAGVWG--- 608 (812)
Q Consensus 552 -----~~~~~~--~~~~~~~~~--~~---~~~~~~~~~~~~~~~----~~h~~~v~~l~~s---~~-g~~l~~~~~~--- 608 (812)
...... ...+..... +. ....+.-++...... ......+.+++.. .+ ..++++|++-
T Consensus 777 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~ 856 (1158)
T 3ei3_A 777 QALSSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYP 856 (1158)
T ss_dssp HCSEEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCT
T ss_pred hhhhhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCC
Confidence 000000 000000000 00 000000011111111 1122344454432 22 3578888641
Q ss_pred -----CcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCeEEecCCCceEEE
Q psy4510 609 -----EVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHI 683 (812)
Q Consensus 609 -----~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~las~s~Dg~v~i 683 (812)
..|+|++|++...+.. .+.. ....+.|++++-- .|++||+.+ ++|++
T Consensus 857 ~e~~~~~Gri~vf~v~~~kL~-----------------------lv~~-~~v~g~v~al~~~--~g~Lla~ig--~~l~v 908 (1158)
T 3ei3_A 857 EEAEPKQGRIVVFQYSDGKLQ-----------------------TVAE-KEVKGAVYSMVEF--NGKLLASIN--STVRL 908 (1158)
T ss_dssp TCSSCCCEEEEEEEEETTEEE-----------------------EEEE-EEESSCEEEEEEE--TTEEEEEET--TEEEE
T ss_pred CCCCCCceEEEEEEEECCEEE-----------------------EEEE-EEcCCcCEEEeee--CCEEEEEcC--CEEEE
Confidence 4588999999743210 1221 1235678888754 345555544 68999
Q ss_pred EecCCCceeEE--E--------EecCCCCEEEeecCCCeEEEeecCCCCCcccccccc--cCCCcceeEeEEecCCceeE
Q psy4510 684 WTPREAGAWSV--Y--------LYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPL--VGHTNSVEDLQWSPGEKRVL 751 (812)
Q Consensus 684 Wd~~~~~~~~~--~--------~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~--~gH~~~V~~l~fs~dg~~~L 751 (812)
|++...+.... . .....+.++++|+.-..|.+...+.... .+..+ .-+...++++.|-.++. +
T Consensus 909 y~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD~~~Sv~~~~y~~~~~---~L~~~a~D~~~~~vta~~~ld~~t--~ 983 (1158)
T 3ei3_A 909 YEWTTEKELRTECNHYNNIMALYLKTKGDFILVGDLMRSVLLLAYKPMEG---NFEEIARDFNPNWMSAVEILDDDN--F 983 (1158)
T ss_dssp EEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEESSBCEEEEEEETTTT---EEEEEEECCSCBCEEEEEEEETTE--E
T ss_pred EECCCCceEEEEeeccccEEEEEEeccCCEEEEEEhhheEEEEEEEcCCC---eEEEEEeecccccEEEEEEEccCc--E
Confidence 99986543221 1 1224578899998888787766543221 12222 22345789999987764 6
Q ss_pred EeeccCCceEEeeecC
Q psy4510 752 ASCSVDRSNRIGARRD 767 (812)
Q Consensus 752 ~s~s~Dg~i~iWd~~~ 767 (812)
+.+..+|.|.+.....
T Consensus 984 l~aD~~gNl~vl~~~~ 999 (1158)
T 3ei3_A 984 LGAENAFNLFVCQKDS 999 (1158)
T ss_dssp EEEETTSEEEEEEECT
T ss_pred EEEcCCCcEEEEecCC
Confidence 7799999999987654
No 271
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.89 E-value=0.0087 Score=63.00 Aligned_cols=224 Identities=11% Similarity=-0.034 Sum_probs=132.2
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKR 254 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~ 254 (812)
...+..++|++.++.+..+-...+.|+.+++............+.........|++.+.+..|..+ ...+.|.+.+++.
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g 190 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKG 190 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEECTTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEeCCC
Confidence 356889999984555666666778899998875321101122223344567789998866656554 4577888888875
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
. .....+........+|++.|.+ +.|+.... .+.|...++..... .......-...+.|++++.+.
T Consensus 191 ~-------~~~~l~~~~~~~P~~iavdp~~-g~ly~td~~~~~~I~~~~~dG~~~----~~~~~~~l~~P~glavd~~~~ 258 (400)
T 3p5b_L 191 V-------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSG 258 (400)
T ss_dssp C-------SEEEEEECSSCCEEEEEEETTT-TEEEEEECSSSCCEEEEETTSCSC----EEEECSSCSCEEEEEEETTTT
T ss_pred C-------ceEEEEeCCCCCcceEEEeccc-CeEEEEeCCCCCEEEEEeCCCCcc----EEEEECCCCceEEEEEEeCCC
Confidence 3 2222233334567899999977 55554442 36788888875432 111122335678999999888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTA 412 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~ 412 (812)
.++++-+..+.|..+|+..... ..+... ...-.....++.. .+.++++-...+.|..+|.. .+..+..+.....
T Consensus 259 ~lY~aD~~~~~I~~~d~dG~~~-~~~~~~-~~~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~---~G~~~~~i~~~~~ 332 (400)
T 3p5b_L 259 RLYWVDSKLHSISSIDVNGGNR-KTILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL---TGSDVNLLAENLL 332 (400)
T ss_dssp EEEEEETTTTEEEEEETTSCCC-EEEEEC-SSTTSSEEEEEEE-TTEEEEEESSSCSEEEEESS---SCCCCEEEECSCS
T ss_pred EEEEEECCCCEEEEEeCCCCcc-EEEEeC-CCCCCCCEEEEEe-CCEEEEecCCCCeEEEEEcC---CCCceEEEecCCC
Confidence 7777767778999999864221 112211 1222345566663 33466666677888888865 3444444433333
Q ss_pred CEEEE
Q psy4510 413 PVTTV 417 (812)
Q Consensus 413 ~v~~v 417 (812)
....|
T Consensus 333 ~p~~i 337 (400)
T 3p5b_L 333 SPEDM 337 (400)
T ss_dssp CEEEE
T ss_pred CCceE
Confidence 33444
No 272
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.89 E-value=0.00046 Score=79.68 Aligned_cols=205 Identities=7% Similarity=-0.025 Sum_probs=113.6
Q ss_pred CCCCC-CeeeeeEc-CCCCcEEEeeC-CC----ceEEeeCCCC-CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEE
Q psy4510 220 GGHTN-SAEDLQWS-DLKTALQTVDD-PF----QLAEHNKKRG-KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 220 ~~h~~-~V~~l~~s-~~~~~l~s~~~-d~----~i~vwd~~~~-~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg 291 (812)
.+|.. .+...+|| |||++||-+.. +| .|+++|+.++ .. ....+.. ....++|+|+++ .|+..
T Consensus 169 ~~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~------l~~~~~~---~~~~~~WspDg~-~l~y~ 238 (751)
T 2xe4_A 169 EGKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQT------IADKVSG---TNGEIVWGPDHT-SLFYV 238 (751)
T ss_dssp TTCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCC------CCCCEEE---ECSCCEECSSTT-EEEEE
T ss_pred cCCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEe------CCccccC---ceeeEEEecCCC-EEEEE
Confidence 34554 78899999 99998885543 22 4999999875 31 0011111 124689999994 44444
Q ss_pred eCC-----CcEEEEeCCCCCcceecccccc-CCCCCEEEEEEcCCCCeEEEEEEC--CCeEEEEECCCCCcccceeecCC
Q psy4510 292 DCK-----RNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPGEKRVLASCSV--DLSIRIWDTRVINTKSCMLTLPN 363 (812)
Q Consensus 292 ~~d-----g~i~vwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~ 363 (812)
..+ ..|+++++.++..... ..+. ........+.|+|+++.++++... ...|.++|+..+.....+..+..
T Consensus 239 ~~d~~~~~~~v~~~~lgt~~~~~~--lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~ 316 (751)
T 2xe4_A 239 TKDETLRENKVWRHVMGKLQSEDV--CLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRP 316 (751)
T ss_dssp EECTTCCEEEEEEEETTSCGGGCE--EEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSC
T ss_pred EECCCCCCCEEEEEECCCCchhcE--EEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeec
Confidence 443 2578888876542111 1111 223456788999999976665543 34677888875321110123323
Q ss_pred cCCCCeEEEEEcCCCCEEEEEeCC--C--cEEEEecCCCCCCCceEE-cccCCC--CEEEEEEccCCCcEEEEEECCCCE
Q psy4510 364 AHTSDVNVISWNRTEPLIVSGGDD--G--CIHVWDLRRFKKGSSVAT-FKHHTA--PVTTVEWHPTESSTFASGGADDQI 436 (812)
Q Consensus 364 ~~~~~v~~l~~~~~~~~l~sg~~d--g--~i~iwd~~~~~~~~~~~~-~~~h~~--~v~~v~~~p~~~~~l~s~~~dg~v 436 (812)
.......++.|+..+.+++....+ + .|..+|+... ..... +..+.. .+..+.+. +..++++...++..
T Consensus 317 ~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~---~~~~~~li~~~~~~~l~~~~~~--~~~lv~~~~~~g~~ 391 (751)
T 2xe4_A 317 REKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQP---SDWSHVLVDHSEDVFMESIAVR--SNYLVVAGRRAGLT 391 (751)
T ss_dssp CCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTST---TCCCCEEECCCSSEEEEEEEEC--SSEEEEEEEETTEE
T ss_pred CCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCc---ccceeeEECCCCCcEEEEEEEE--CCEEEEEEEeCCEE
Confidence 344556667665544455554443 3 5666666421 11112 222333 34455554 45677777778754
Q ss_pred E--EEEc
Q psy4510 437 A--LWDL 441 (812)
Q Consensus 437 ~--iwd~ 441 (812)
+ ++++
T Consensus 392 ~l~~~dl 398 (751)
T 2xe4_A 392 RIWTMMA 398 (751)
T ss_dssp EEEEEEC
T ss_pred EEEEEec
Confidence 4 4554
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.87 E-value=0.038 Score=58.08 Aligned_cols=186 Identities=12% Similarity=0.026 Sum_probs=115.7
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+......+.+|+|.+.+..++.+-...+.|+.+++....................
T Consensus 90 ~~~~I~~i~l~~~--------~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p 161 (400)
T 3p5b_L 90 NRHEVRKMTLDRS--------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 161 (400)
T ss_dssp ETTEEEEECTTSC--------SCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCE
T ss_pred ccceeEEEccCCc--------ceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCc
Confidence 4467888887763 22333344567899999997734555555678899999875321000112222234567
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~ 400 (812)
..+++.+.+.+++++-...+.|.+.++.... ...+..........|++.|.+..|+... ..+.|...++.
T Consensus 162 ~glavD~~~~~lY~~d~~~~~I~~~~~~g~~----~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~d---- 233 (400)
T 3p5b_L 162 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN---- 233 (400)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEECTTTCS----EEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETT----
T ss_pred ccEEEEecCCceEEEECCCCeEEEEeCCCCc----eEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCC----
Confidence 8999998766677777778899999987322 1222122344578999999766554443 24788888885
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|+++|.+.++.++-...+.|..+|+...
T Consensus 234 G~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 234 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 3233322 2233567899999887655555555678999998754
No 274
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.86 E-value=0.0073 Score=61.06 Aligned_cols=231 Identities=9% Similarity=0.011 Sum_probs=129.5
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-C-cEEEEeC
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-R-NIHIWTP 302 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-g-~i~vwd~ 302 (812)
....++|+++++.+++-...+.|..++.... ....+ .-.....++++.+++ .++++.... + .|..++.
T Consensus 33 ~pegia~~~~g~lyv~d~~~~~I~~~d~~g~--------~~~~~-~~~~~p~gia~~~dG-~l~vad~~~~~~~v~~~d~ 102 (306)
T 2p4o_A 33 FLENLASAPDGTIFVTNHEVGEIVSITPDGN--------QQIHA-TVEGKVSGLAFTSNG-DLVATGWNADSIPVVSLVK 102 (306)
T ss_dssp CEEEEEECTTSCEEEEETTTTEEEEECTTCC--------EEEEE-ECSSEEEEEEECTTS-CEEEEEECTTSCEEEEEEC
T ss_pred CcceEEECCCCCEEEEeCCCCeEEEECCCCc--------eEEEE-eCCCCceeEEEcCCC-cEEEEeccCCcceEEEEcC
Confidence 4567888888886666557888888887642 22222 223568899999998 555554332 2 4666776
Q ss_pred CCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--------cCCcCCCCeEEEEE
Q psy4510 303 REAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--------LPNAHTSDVNVISW 374 (812)
Q Consensus 303 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------~~~~~~~~v~~l~~ 374 (812)
.++.... .... ........++..+.+. ++++...++.|.++|...... .+.. .....-...+.|
T Consensus 103 ~~g~~~~--~~~~-~~~~~~~g~~~~~~~~-~~v~d~~~g~i~~~d~~~~~~--~v~~~~~~~~~~~~~~~~~~pngi-- 174 (306)
T 2p4o_A 103 SDGTVET--LLTL-PDAIFLNGITPLSDTQ-YLTADSYRGAIWLIDVVQPSG--SIWLEHPMLARSNSESVFPAANGL-- 174 (306)
T ss_dssp TTSCEEE--EEEC-TTCSCEEEEEESSSSE-EEEEETTTTEEEEEETTTTEE--EEEEECGGGSCSSTTCCSCSEEEE--
T ss_pred CCCeEEE--EEeC-CCccccCcccccCCCc-EEEEECCCCeEEEEeCCCCcE--eEEEECCccccccccCCCCcCCCc--
Confidence 6654211 1111 1122345555555443 555555688999999763210 0100 001112245566
Q ss_pred cCCCCE-EEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhh
Q psy4510 375 NRTEPL-IVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQRE 453 (812)
Q Consensus 375 ~~~~~~-l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~ 453 (812)
++++.. +++-...+.|.++++...........+.. ......+++.++| +++++....+.|.++|.... .
T Consensus 175 s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG-~l~va~~~~~~V~~~~~~G~-~------- 244 (306)
T 2p4o_A 175 KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEG-NLYGATHIYNSVVRIAPDRS-T------- 244 (306)
T ss_dssp EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTC-CEEEECBTTCCEEEECTTCC-E-------
T ss_pred CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCC-CEEEEeCCCCeEEEECCCCC-E-------
Confidence 777774 45555678999999863101011111111 1234668899987 56666666788999986522 1
Q ss_pred hhhccCCCceE-EeecCCCceeEEEEc---CCCCCEEEEEeC
Q psy4510 454 AELKDLPSQLL-FIHLGQKEIKELHWH---PQLPGTIISTAN 491 (812)
Q Consensus 454 ~~~~~~~~~~~-~~~~~~~~v~~~~~~---p~~~~~~~~~~~ 491 (812)
..+ .....-....+++|. |++..++++...
T Consensus 245 --------~~~~~~~~~~~~p~~~a~~g~~~d~~~LyVt~~~ 278 (306)
T 2p4o_A 245 --------TIIAQAEQGVIGSTAVAFGQTEGDCTAIYVVTNG 278 (306)
T ss_dssp --------EEEECGGGTCTTEEEEEECCSTTTTTEEEEEECT
T ss_pred --------EEEeecccccCCceEEEEecccCCCCEEEEECCC
Confidence 001 111222457889998 776667766654
No 275
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.86 E-value=0.0059 Score=62.06 Aligned_cols=205 Identities=10% Similarity=-0.057 Sum_probs=123.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+..++|++.++.+.++-...+.|..+++.+..........+...-.....+++.+.+..|..+ ...+.|.+.+....
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~ 109 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 109 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCC
Confidence 45788999984455666767778999999876210000111122223456789998766655544 56788999987652
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-C-CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-K-RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-d-g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.....+.........+++.|.+ +.|..++. . +.|...++..... .......-...+.|+++|++..
T Consensus 110 -------~~~~~~~~~~~~P~~iavdp~~-g~ly~~d~~~~~~I~~~~~dG~~~----~~~~~~~~~~P~gla~d~~~~~ 177 (316)
T 1ijq_A 110 -------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSGR 177 (316)
T ss_dssp -------SEEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCCE----EEEECSSCSCEEEEEEETTTTE
T ss_pred -------ceEEEEECCCCCcceEEeCCCC-CEEEEEccCCCCeEEEEcCCCCCe----EEEEECCCCCceEEEEeccCCE
Confidence 1112222334567899999977 45444443 3 6788888764431 1111122346789999998887
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+|+.... ...+... .........+++. .+.++++-...+.|..++..
T Consensus 178 lY~~D~~~~~I~~~d~dg~~-~~~~~~~-~~~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~ 237 (316)
T 1ijq_A 178 LYWVDSKLHSISSIDVNGGN-RKTILED-EKRLAHPFSLAVF-EDKVFWTDIINEAIFSANRL 237 (316)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEEEC-TTTTSSEEEEEEE-TTEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCeEEEEecCCCc-eEEEeec-CCccCCcEEEEEE-CCEEEEEECCCCeEEEEeCC
Confidence 77777778899999987422 2222221 1122345677775 35566666667888888875
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.85 E-value=0.033 Score=56.40 Aligned_cols=181 Identities=12% Similarity=0.021 Sum_probs=112.6
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCC---CcceeccccccCCCCC
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREA---GAWQVDQKPLVGHTNS 321 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~---~~~~~~~~~~~~h~~~ 321 (812)
..|+..++... .....+ .......+++|.+.+..++.+-...+.|..+++... .. ....+......
T Consensus 10 ~~I~~i~~~~~-------~~~~~~-~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~---~~~~~~~~~~~ 78 (316)
T 1ijq_A 10 HEVRKMTLDRS-------EYTSLI-PNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS---YDTVISRDIQA 78 (316)
T ss_dssp SSEEEEETTSC-------CCEEEE-CSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC-----------CEEEECSSCSC
T ss_pred CeEEEEECCCc-------ceEehh-cCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc---cEEEEeCCCCC
Confidence 55778887763 222223 334567899999876345555556789999998762 11 11112222245
Q ss_pred EEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-CC-CcEEEEecCCCC
Q psy4510 322 VEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-DD-GCIHVWDLRRFK 399 (812)
Q Consensus 322 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~d-g~i~iwd~~~~~ 399 (812)
...+++.+.+.+++++-...+.|.+.++.... ...+..........+++.|.+..|+... .. +.|...++.
T Consensus 79 p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~----~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d--- 151 (316)
T 1ijq_A 79 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN--- 151 (316)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSSS----EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT---
T ss_pred cCEEEEeecCCeEEEEECCCCEEEEEeCCCCc----eEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC---
Confidence 68899988777677777778999999986321 1122122334678999998666444443 33 688888885
Q ss_pred CCCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 400 KGSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|+++|++..+.++-+..+.|..+|+...
T Consensus 152 -G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~ 196 (316)
T 1ijq_A 152 -GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 196 (316)
T ss_dssp -SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred -CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC
Confidence 3333333 2233467899999987656666666778999998754
No 277
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.83 E-value=0.0018 Score=69.11 Aligned_cols=245 Identities=7% Similarity=0.024 Sum_probs=137.7
Q ss_pred CceEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-CC----ceEEe
Q psy4510 177 TEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-PF----QLAEH 250 (812)
Q Consensus 177 ~~i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-d~----~i~vw 250 (812)
.....++++|. ++.+.++-.. +.|+.+|+.+.. +..+.........|+|++++++|..+.. .+ .+.+.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~-~~I~~id~~~~~-----v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~ 210 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQ-HPTRLIDFEKEY-----VSTVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYIL 210 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBT-EEEEEEETTTTE-----EEEEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEE
T ss_pred CCCCEEEECCCCCCeEEEEeCC-CcEEEEECCCCE-----EEEEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEE
Confidence 45577899982 4555554443 789999887653 1222234456889999999996666654 22 23333
Q ss_pred eCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 251 NKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 251 d~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
+.... ......+.. ......++++|++..++++-...+.|..++....... ..... +.......|+|+|+
T Consensus 211 ~~~g~------~~~~~~l~~-~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~--~~~~~-~~~~~P~gia~~pd 280 (430)
T 3tc9_A 211 TRESG------FKVITELTK-GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETT--PLFTI-QDSGWEFHIQFHPS 280 (430)
T ss_dssp EGGGT------SCSEEEEEE-CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEE--EEEEC-SSSSCCEEEEECTT
T ss_pred eCCCc------eeeeeeecc-CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEE--EEEEc-CCCCcceeEEEcCC
Confidence 33221 121122221 2345678899944256666666788999998765310 01111 12245679999999
Q ss_pred CCeEEEEEECCCeEEEEECCCCCc-ccceeecCC--------------cCCCCeE-EEEEc--------CCCCEEEEEeC
Q psy4510 331 EKRVLASCSVDLSIRIWDTRVINT-KSCMLTLPN--------------AHTSDVN-VISWN--------RTEPLIVSGGD 386 (812)
Q Consensus 331 ~~~~l~s~~~dg~i~iwd~~~~~~-~~~~~~~~~--------------~~~~~v~-~l~~~--------~~~~~l~sg~~ 386 (812)
++.++++-...+.|..++...... ...+..+.. +.-..-. .++.. +++.++++=..
T Consensus 281 G~~lyv~d~~~~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~ 360 (430)
T 3tc9_A 281 GNYAYIVVVNQHYILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRE 360 (430)
T ss_dssp SSEEEEEETTTTEEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGG
T ss_pred CCEEEEEECCCCEEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECC
Confidence 997677777788999988652100 000011100 0011122 45543 33555565556
Q ss_pred CCcEEEEecCCCCCCCceEEcccC------------------CCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHH------------------TAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h------------------~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.+.|+.++.. +. +.++.+. -.....|++.|++..++++-...++|+.+++.
T Consensus 361 n~~I~~i~~~----G~-v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 361 NHCIRILTPQ----GR-VTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEERECFFIGDRENRRIRKIGYE 429 (430)
T ss_dssp GTEEEEECTT----SE-EEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CcEEEEECCC----Cc-EEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCEEEEEECCCCeEEEEccC
Confidence 6788888742 32 2222211 11468899998544566665566788887753
No 278
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.82 E-value=0.00081 Score=64.07 Aligned_cols=200 Identities=12% Similarity=0.039 Sum_probs=116.9
Q ss_pred CCCCCCccCcCCCC--CceEEEEeCCCCCCeEEEecCC--CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcE
Q psy4510 163 GIPTPPLFSFSGHL--TEGFAMDWSSTEPGVLATGDCK--RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTAL 238 (812)
Q Consensus 163 ~~~~~~i~~~~gh~--~~i~~~~~sp~~~~~lat~~~d--g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l 238 (812)
....+.+..+ .|. .-...+.|++ +.+..+.+.+ ..|+.+|+.+++.... ..+..+ .........++.|
T Consensus 6 ~~~~~v~~~~-phd~~~ftqGL~~~~--~~LyestG~~g~S~v~~vD~~tgkv~~~--~~l~~~---~fgeGi~~~~~~l 77 (243)
T 3mbr_X 6 TQGYRVVKRY-PHDTTAFTEGLFYLR--GHLYESTGETGRSSVRKVDLETGRILQR--AEVPPP---YFGAGIVAWRDRL 77 (243)
T ss_dssp BCCEEEEEEE-ECCTTCCEEEEEEET--TEEEEEECCTTSCEEEEEETTTCCEEEE--EECCTT---CCEEEEEEETTEE
T ss_pred ccceEEEEEc-CCCCccccccEEEEC--CEEEEECCCCCCceEEEEECCCCCEEEE--EeCCCC---cceeEEEEeCCEE
Confidence 3333444444 454 3356888876 4566666654 4899999999874221 122222 2222222334555
Q ss_pred EEe-eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC
Q psy4510 239 QTV-DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG 317 (812)
Q Consensus 239 ~s~-~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~ 317 (812)
... -.++.+.++|..+. +.+.++.. ....++|+ +++ ..|+.+..++.|.++|..+.+..... ....
T Consensus 78 y~ltw~~~~v~v~D~~tl-------~~~~ti~~-~~~Gwglt--~dg-~~L~vSdgs~~l~~iDp~t~~~~~~I--~V~~ 144 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATL-------TPRARFRY-PGEGWALT--SDD-SHLYMSDGTAVIRKLDPDTLQQVGSI--KVTA 144 (243)
T ss_dssp EEEESSSSEEEEEETTTT-------EEEEEEEC-SSCCCEEE--ECS-SCEEEECSSSEEEEECTTTCCEEEEE--ECEE
T ss_pred EEEEeeCCEEEEEECCcC-------cEEEEEeC-CCCceEEe--eCC-CEEEEECCCCeEEEEeCCCCeEEEEE--EEcc
Confidence 444 47899999999884 66777664 33455665 455 45555566889999999887631111 1111
Q ss_pred CC---CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee--cC-------CcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 318 HT---NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT--LP-------NAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 318 h~---~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~-------~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
+. ..++.+.|. +|. +++..-.+..|.+.|.+++.-...+.. +. .....-.+.|+++|+++.|+..+
T Consensus 145 ~g~~~~~lNeLe~~-~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTG 222 (243)
T 3mbr_X 145 GGRPLDNLNELEWV-NGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTG 222 (243)
T ss_dssp TTEECCCEEEEEEE-TTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEE
T ss_pred CCcccccceeeEEe-CCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEEC
Confidence 11 345677776 454 676666788999999986543221110 10 01224579999999887555444
No 279
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=97.81 E-value=0.12 Score=61.78 Aligned_cols=114 Identities=8% Similarity=0.014 Sum_probs=67.6
Q ss_pred CCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCC------CCEEEEEeC-CCcEEE
Q psy4510 320 NSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRT------EPLIVSGGD-DGCIHV 392 (812)
Q Consensus 320 ~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~------~~~l~sg~~-dg~i~i 392 (812)
..|...+.+. .. ++.++ .+.+.++.+..++ ....... .-...|.|+++.|. +++++.|.. |++|+|
T Consensus 514 ~~I~~As~n~--~~-vvva~-g~~l~~fel~~~~-L~~~~~~--~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I 586 (1158)
T 3ei3_A 514 KNISVASCNS--SQ-VVVAV-GRALYYLQIHPQE-LRQISHT--EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARI 586 (1158)
T ss_dssp CCCCEEEECS--SE-EEEEE-TTEEEEEEEETTE-EEEEEEE--ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEE
T ss_pred CEEEEEEeCC--CE-EEEEE-CCEEEEEEeeCCc-eeeeccc--CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEE
Confidence 3566666543 33 44444 5788888776421 1112221 23567999999863 358999996 999999
Q ss_pred EecCCCCCCCceEEccc-CCCCEEEEEEcc-CCCcEEEEEECCCCEEEEEcCC
Q psy4510 393 WDLRRFKKGSSVATFKH-HTAPVTTVEWHP-TESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 393 wd~~~~~~~~~~~~~~~-h~~~v~~v~~~p-~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
+++.. ...+....- -.....++.+.. .+..+|..|-.||.+..+.+..
T Consensus 587 ~sL~~---l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~ 636 (1158)
T 3ei3_A 587 LKLPS---FELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNI 636 (1158)
T ss_dssp EETTT---CCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECT
T ss_pred EECCC---CCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcC
Confidence 99974 333332211 122444554432 1335788898999887776653
No 280
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.77 E-value=0.036 Score=56.12 Aligned_cols=184 Identities=12% Similarity=-0.019 Sum_probs=115.4
Q ss_pred CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 244 PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 244 d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
...|+..++... .............+.+++|.+.+..++.+-...+.|+.+++...... ...+........
T Consensus 12 ~~~I~~i~l~~~------~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~~~l~~p~ 82 (318)
T 3sov_A 12 RRDLRLVDATNG------KENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPD 82 (318)
T ss_dssp EEEEEEEETTCT------TSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC---CEEEEECCSCCC
T ss_pred cCeEEEEECCCC------ceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce---EEEEcCCCCCcc
Confidence 467888888763 11122222223457799999976355556566788999998765311 111122224567
Q ss_pred EEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe--CCCcEEEEecCCCCCC
Q psy4510 324 DLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG--DDGCIHVWDLRRFKKG 401 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~--~dg~i~iwd~~~~~~~ 401 (812)
.+++.+.+..++++-...+.|.++++.... ...+........+.+++.|.+..|+... ..+.|...++. +
T Consensus 83 glavd~~~g~ly~~d~~~~~I~~~~~dG~~----~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~d----G 154 (318)
T 3sov_A 83 GLACDWLGEKLYWTDSETNRIEVSNLDGSL----RKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD----G 154 (318)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEETTSCS----CEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETT----S
T ss_pred EEEEEcCCCeEEEEECCCCEEEEEECCCCc----EEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcC----C
Confidence 899998777677777778899999987422 1112123345678999998766555444 35788888885 2
Q ss_pred CceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 402 SSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
.....+ ...-..-..|+++|++..+.++-+..+.|..+|+...
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~ 198 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 198 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC
Confidence 222222 2223456899999977656666566788999998754
No 281
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.77 E-value=0.0025 Score=72.26 Aligned_cols=200 Identities=11% Similarity=0.132 Sum_probs=106.7
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccC-----CCC-CCe-eeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLG-----GHT-NSA-EDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~-----~h~-~~V-~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+..|++++.++.|.-+|..+++..-....... ... ..+ ..+++ .+..++.++.++.|..+|..++
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG------ 137 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTG------ 137 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTC------
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCC------
Confidence 34455555567777777776653210000000 000 011 12233 3456788888999999999987
Q ss_pred CCCceEEcCCC-CcEEEEEecC--CCCCEEEEEeC------CCcEEEEeCCCCCc-ceecccc---cc------------
Q psy4510 262 TPPLFSFSGHL-TEGFAMDWSS--TEPGVLATGDC------KRNIHIWTPREAGA-WQVDQKP---LV------------ 316 (812)
Q Consensus 262 ~~~~~~~~~h~-~~v~~l~~sp--~~~~~l~sg~~------dg~i~vwd~~~~~~-~~~~~~~---~~------------ 316 (812)
+.+..+.... .....+.-+| .+ +.++.+.. +|.|..+|..+++. |...... ..
T Consensus 138 -~~~W~~~~~~~~~~~~~~~~P~v~~-~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~ 215 (668)
T 1kv9_A 138 -KAIWSQQTTDPAKPYSITGAPRVVK-GKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAK 215 (668)
T ss_dssp -CEEEEEECSCTTSSCBCCSCCEEET-TEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHT
T ss_pred -CEeeeeccCCCCCcceecCCCEEEC-CEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccc
Confidence 4444443311 0001111111 12 45555543 58899999998874 2221100 00
Q ss_pred -----------CCCCCEEEEEEcCCCCeEEEEEECCC-------------------eEEEEECCCCCcccceeecCCc-C
Q psy4510 317 -----------GHTNSVEDLQWSPGEKRVLASCSVDL-------------------SIRIWDTRVINTKSCMLTLPNA-H 365 (812)
Q Consensus 317 -----------~h~~~v~~~~~~p~~~~~l~s~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~-~ 365 (812)
++......+++.|... +++.++.++ .|..+|.++++. +..+... |
T Consensus 216 ~~~g~~~w~~~~gg~~w~~~a~d~~~~-~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~---~W~~~~~~~ 291 (668)
T 1kv9_A 216 TWQGDQYWKLGGGGTVWDSMAYDPELD-LLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKL---AWHYQVTPG 291 (668)
T ss_dssp TCCSSCHHHHCEECCCCSCEEEETTTT-EEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCE---EEEEESSTT
T ss_pred cCCccceeeeCCCCccccceEEcCCCC-EEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCce---eeEeecCCC
Confidence 1111223468888777 577776665 499999986543 3333111 2
Q ss_pred C-------CCeEEEEEcCCCC---EEEEEeCCCcEEEEecCCCCCCCceE
Q psy4510 366 T-------SDVNVISWNRTEP---LIVSGGDDGCIHVWDLRRFKKGSSVA 405 (812)
Q Consensus 366 ~-------~~v~~l~~~~~~~---~l~sg~~dg~i~iwd~~~~~~~~~~~ 405 (812)
. .+.....+..+|+ .++.++.+|.++++|.+ +++.+.
T Consensus 292 ~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~---tG~~l~ 338 (668)
T 1kv9_A 292 DSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRT---NGKLIS 338 (668)
T ss_dssp CCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETT---TCCEEE
T ss_pred ccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECC---CCCEec
Confidence 2 2333333333564 68899999999999987 455553
No 282
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.73 E-value=0.0011 Score=75.45 Aligned_cols=115 Identities=12% Similarity=0.052 Sum_probs=70.9
Q ss_pred EEeCCCCCCeEEEecCCC-----------cEEEEccCCCCccccccccc-CCCCCCeeeeeEcCCCCcEEEee-CCCceE
Q psy4510 182 MDWSSTEPGVLATGDCKR-----------NIHIWTPREAGAWQVDQKPL-GGHTNSAEDLQWSDLKTALQTVD-DPFQLA 248 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg-----------~v~iwd~~~~~~~~~~~~~l-~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~ 248 (812)
+++.|.++++++.||.++ .+.+||+.+.+-.. ...+ ..+.....++++..+++.++.|+ .+..+.
T Consensus 191 ~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~--~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 191 AAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSD--RTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCC--CEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred EEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEe--CcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 455554778888887543 58899998765321 1112 22334455678889999999998 456799
Q ss_pred EeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe-CC-----CcEEEEeCCCC
Q psy4510 249 EHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD-CK-----RNIHIWTPREA 305 (812)
Q Consensus 249 vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~-~d-----g~i~vwd~~~~ 305 (812)
+||..+.. ...+..+.. ...-.+++..+++ .+++.|+ .+ ..+.+||+.+.
T Consensus 269 ~yd~~t~~-----W~~~~~~~~-~R~~~s~~~~~dg-~iyv~GG~~~~~~~~~~~e~yd~~t~ 324 (656)
T 1k3i_A 269 LYDSSSDS-----WIPGPDMQV-ARGYQSSATMSDG-RVFTIGGSWSGGVFEKNGEVYSPSSK 324 (656)
T ss_dssp EEEGGGTE-----EEECCCCSS-CCSSCEEEECTTS-CEEEECCCCCSSSCCCCEEEEETTTT
T ss_pred EecCcCCc-----eeECCCCCc-cccccceEEecCC-eEEEEeCcccCCcccccceEeCCCCC
Confidence 99987641 111111111 1112345566777 6888887 34 56899998765
No 283
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.72 E-value=0.043 Score=62.78 Aligned_cols=186 Identities=12% Similarity=0.026 Sum_probs=115.7
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCE
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV 322 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v 322 (812)
....|+..++... ....+......+.+|+|.+....++++-...+.|+.+++............+.......
T Consensus 402 n~~~Ir~i~l~~~--------~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P 473 (791)
T 3m0c_C 402 NRHEVRKMTLDRS--------EYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAP 473 (791)
T ss_dssp CBSSEEEECTTSC--------CCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCC
T ss_pred cccceeEeeccCC--------cceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCc
Confidence 4456777776652 23334444567889999997635555656678899999875321000112222234567
Q ss_pred EEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe-C-CCcEEEEecCCCCC
Q psy4510 323 EDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG-D-DGCIHVWDLRRFKK 400 (812)
Q Consensus 323 ~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~-~-dg~i~iwd~~~~~~ 400 (812)
..|++.+.+++|+++-...+.|.+.++.... ...+..........|++.|.+..|+... . .+.|.+.++.
T Consensus 474 ~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~----~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d---- 545 (791)
T 3m0c_C 474 DGLAVDWIHSNIYWTDSVLGTVSVADTKGVK----RKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN---- 545 (791)
T ss_dssp CEEEEETTTTEEEEEETTTTEEEEEETTSSS----EEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT----
T ss_pred ceeeeeecCCcEEEEecCCCeEEEEeCCCCe----EEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecC----
Confidence 7899998888788888888999999987322 2222123344578999999765554443 2 3678888885
Q ss_pred CCceEEc-ccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 401 GSSVATF-KHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 401 ~~~~~~~-~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+.....+ ...-.....|++.+.+.+++++-...+.|...++...
T Consensus 546 G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 546 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC
Confidence 3333333 2233567899999876555555455678888988655
No 284
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.71 E-value=0.0018 Score=73.50 Aligned_cols=237 Identities=12% Similarity=0.053 Sum_probs=132.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCC--CCCeee-eeEcCCCCcEEEeeC------CCceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGH--TNSAED-LQWSDLKTALQTVDD------PFQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h--~~~V~~-l~~s~~~~~l~s~~~------d~~i~vwd~~~~~~~~ 259 (812)
+..|++++.|+.|..+|..+++..-.. .+... ...+.+ ..+ .++ .++.+.. ++.|..+|..++
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~--~~~~~~~~~~~~~~P~v-~~~-~v~vg~~~~~~~~~g~v~a~D~~tG---- 188 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQ--QTTDPAKPYSITGAPRV-VKG-KVIIGNGGAEYGVRGFVSAYDADTG---- 188 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEE--ECSCTTSSCBCCSCCEE-ETT-EEEECCBCTTTCCBCEEEEEETTTC----
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeee--ccCCCCCcceecCCCEE-ECC-EEEEeCCCCCcCCCCEEEEEECCCC----
Confidence 456777778899999999888742111 11100 111111 111 133 4444432 588999999887
Q ss_pred CCCCCceEEcC-------------------------------CCCcEEEEEecCCCCCEEEEEeCCC-------------
Q psy4510 260 IPTPPLFSFSG-------------------------------HLTEGFAMDWSSTEPGVLATGDCKR------------- 295 (812)
Q Consensus 260 ~~~~~~~~~~~-------------------------------h~~~v~~l~~sp~~~~~l~sg~~dg------------- 295 (812)
+.+.++.. +......+++.|.. ++++.+..++
T Consensus 189 ---~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~-~~vy~~~~~g~~w~~~~~~~~~g 264 (668)
T 1kv9_A 189 ---KLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPEL-DLLYVGTGNGSPWNREVRSPGGG 264 (668)
T ss_dssp ---CEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTT-TEEEEECCCEESSCHHHHSTTCC
T ss_pred ---cEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCC-CEEEEeCCCCCccccCCCCCCCC
Confidence 33333321 01111246788876 6888887665
Q ss_pred ------cEEEEeCCCCCc-ceeccccccCCC-------CCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCccccee
Q psy4510 296 ------NIHIWTPREAGA-WQVDQKPLVGHT-------NSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSCML 359 (812)
Q Consensus 296 ------~i~vwd~~~~~~-~~~~~~~~~~h~-------~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~~~ 359 (812)
.|..+|+.+++. |... ...|. .+.....+..+++ .+++.++.+|.+.++|.++++......
T Consensus 265 d~l~~~~v~AlD~~tG~~~W~~~---~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~ 341 (668)
T 1kv9_A 265 DNLYLSSILAIRPDTGKLAWHYQ---VTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEK 341 (668)
T ss_dssp CCTTTTEEEEECTTTCCEEEEEE---SSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEE
T ss_pred CceeeeeEEEEcCCCCceeeEee---cCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEecccc
Confidence 399999998874 2211 11121 2222222223443 358889999999999998654321100
Q ss_pred --------ecCCcCCC------------------------CeEEEEEcCCCCEEEEEe----------------------
Q psy4510 360 --------TLPNAHTS------------------------DVNVISWNRTEPLIVSGG---------------------- 385 (812)
Q Consensus 360 --------~~~~~~~~------------------------~v~~l~~~~~~~~l~sg~---------------------- 385 (812)
.+...... .-..++++|+..+++...
T Consensus 342 ~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~ 421 (668)
T 1kv9_A 342 FGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNT 421 (668)
T ss_dssp SSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCC
T ss_pred ccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceEeeeecccccccccccc
Confidence 00000000 011267777766555421
Q ss_pred --------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 386 --------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 386 --------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.+|.|..||+. +++.+.....+. ++....+...+ .+++.++.|+.|+.||..+++
T Consensus 422 g~~~~~~~~~p~~~~~g~l~A~D~~---tG~~~W~~~~~~-~~~~~~~~t~g-g~vf~g~~dg~l~a~d~~tG~ 490 (668)
T 1kv9_A 422 AAGFADATDVPAAVVSGALLAWDPV---KQKAAWKVPYPT-HWNGGTLSTAG-NLVFQGTAAGQMHAYSADKGE 490 (668)
T ss_dssp SSCGGGCCCCCGGGCEEEEEEEETT---TTEEEEEEEESS-SCCCCEEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred CccccccCCCCCCCccceEEEEeCC---CCcEEEEccCCC-CCcCceeEeCC-CEEEEECCcccchhhhhhcCh
Confidence 23789999997 466666655432 22223333444 478888999999999999884
No 285
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.71 E-value=0.016 Score=64.18 Aligned_cols=76 Identities=5% Similarity=-0.031 Sum_probs=50.3
Q ss_pred CCceEEEEecCCCce-eEEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCC-cceeEeEEecC
Q psy4510 677 CKRNIHIWTPREAGA-WSVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHT-NSVEDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~-~~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~-~~V~~l~fs~d 746 (812)
.+|.|..||+.+|++ ++... ....+.+|..|+.|+.++.||.++++. +-.+.-.. ....-+.|..+
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~----lW~~~l~~g~~~~P~~y~~~ 526 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDL----LWKFKIPSGAIGYPMTYTHK 526 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CcCeEEEEECCCCCEEeEecCCCCccCcceEecCCEEEEECCCCeEEEEECCCCCE----EEEeeCCCCcEeccEEEEeC
Confidence 458999999999876 33321 223567888899999999999999985 22222111 11233667789
Q ss_pred CceeEEeecc
Q psy4510 747 EKRVLASCSV 756 (812)
Q Consensus 747 g~~~L~s~s~ 756 (812)
|++|+++.+-
T Consensus 527 G~qyv~~~~G 536 (599)
T 1w6s_A 527 GTQYVAIYYG 536 (599)
T ss_dssp TEEEEEEEEC
T ss_pred CEEEEEEEcc
Confidence 9877765443
No 286
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.68 E-value=0.011 Score=59.86 Aligned_cols=200 Identities=11% Similarity=-0.022 Sum_probs=125.3
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+.+++|.+.++.+..+-...+.|+.+++.+.... ...+...-.....+++.+.+..|..+ ...+.|.+.++...
T Consensus 35 ~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~---~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~ 111 (318)
T 3sov_A 35 EDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESV---QNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGS 111 (318)
T ss_dssp EEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCC---CEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCce---EEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCC
Confidence 456789999855666677777889999988765321 11122222456788998766555444 46678999988752
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEe--CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGD--CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.....+.........+++.|.+ +.|.... ..+.|...++..... .......-...+.|+++|++..
T Consensus 112 -------~~~~l~~~~~~~P~giavdp~~-g~ly~td~~~~~~I~r~~~dG~~~----~~~~~~~l~~Pnglavd~~~~~ 179 (318)
T 3sov_A 112 -------LRKVLFWQELDQPRAIALDPSS-GFMYWTDWGEVPKIERAGMDGSSR----FIIINSEIYWPNGLTLDYEEQK 179 (318)
T ss_dssp -------SCEEEECSSCSSEEEEEEEGGG-TEEEEEECSSSCEEEEEETTSCSC----EEEECSSCSCEEEEEEETTTTE
T ss_pred -------cEEEEEeCCCCCccEEEEeCCC-CEEEEEecCCCCEEEEEEcCCCCe----EEEEECCCCCccEEEEeccCCE
Confidence 2222223444567899999976 5555554 257788888764431 1111122345789999998887
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+|+.... ...+. .........+++.. +.++.+-...+.|..++..
T Consensus 180 lY~aD~~~~~I~~~d~dG~~-~~~~~---~~~~~~P~glav~~-~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 180 LYWADAKLNFIHKSNLDGTN-RQAVV---KGSLPHPFALTLFE-DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp EEEEETTTTEEEEEETTSCS-CEEEE---CSCCSCEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred EEEEECCCCEEEEEcCCCCc-eEEEe---cCCCCCceEEEEeC-CEEEEEecCCCeEEEEECC
Confidence 77777778899999987322 11111 22334456677653 3466666667888888875
No 287
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.68 E-value=0.079 Score=58.62 Aligned_cols=83 Identities=7% Similarity=0.046 Sum_probs=50.3
Q ss_pred CCceEEEEecCCCcee-EEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcce-eEeEEecC
Q psy4510 677 CKRNIHIWTPREAGAW-SVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSV-EDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~-~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V-~~l~fs~d 746 (812)
.+|.|..||+.+|++. +... ....+.+|++|+.|+.++.||.++++. +-.+....+.+ .-+.|..+
T Consensus 464 ~~G~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~----lW~~~~~~g~~a~P~~y~~~ 539 (582)
T 1flg_A 464 HVGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKE----LWKFQTGSGIVSPPITWEQD 539 (582)
T ss_dssp CSEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CcceEEEEECCCCCEEEEecCCCCCcccceEeCCCEEEEECCCCcEEEEECCCCCE----EEEecCCCCcccCceEEEEC
Confidence 4677777777776543 3221 122456788899999999999999984 22332222211 23677889
Q ss_pred CceeEEeecc-CCceEEe
Q psy4510 747 EKRVLASCSV-DRSNRIG 763 (812)
Q Consensus 747 g~~~L~s~s~-Dg~i~iW 763 (812)
|++|+++.+- -|.+-+|
T Consensus 540 G~qYv~~~~G~gg~~~~~ 557 (582)
T 1flg_A 540 GEQYLGVTVGYGGAVPLW 557 (582)
T ss_dssp TEEEEEEEECCCSHHHHH
T ss_pred CEEEEEEEccCCCccccc
Confidence 9877765543 3434344
No 288
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.68 E-value=0.018 Score=63.77 Aligned_cols=77 Identities=8% Similarity=-0.028 Sum_probs=49.0
Q ss_pred CCceEEEEecCCCcee-EEEE--------ecCCCCEEEeecCCCeEEEeecCCCCCccccccccc-CCCcceeEeEEecC
Q psy4510 677 CKRNIHIWTPREAGAW-SVYL--------YTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLV-GHTNSVEDLQWSPG 746 (812)
Q Consensus 677 ~Dg~v~iWd~~~~~~~-~~~~--------~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~-gH~~~V~~l~fs~d 746 (812)
.+|.|..||+.+|++. +... +...+..|.+++.||.|+.+|.++++. +-.+. ++...-.-+.+..+
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~----lw~~~~~~~~~~~p~~~~~~ 517 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKE----LWNFKMPSGGIGSPMTYSFK 517 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCE----EEEEECSSCCCSCCEEEEET
T ss_pred CCCeEEEEECCCCCEEEEecCCCCccceeEEECCCEEEEEcCCCeEEEEECCCCCE----EEEEeCCCCcEeeeEEEEEC
Confidence 4689999999998753 3221 223466788899999999999999984 22222 21111122446789
Q ss_pred CceeEEeeccC
Q psy4510 747 EKRVLASCSVD 757 (812)
Q Consensus 747 g~~~L~s~s~D 757 (812)
|+.|+++.+..
T Consensus 518 G~~yv~~~~G~ 528 (571)
T 2ad6_A 518 GKQYIGSMYGV 528 (571)
T ss_dssp TEEEEEEEECC
T ss_pred CEEEEEEECCC
Confidence 98555555444
No 289
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.55 E-value=0.0051 Score=68.12 Aligned_cols=236 Identities=11% Similarity=0.013 Sum_probs=128.4
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCC--CCeee-eeEcCCCCcEEEeeC------CCceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT--NSAED-LQWSDLKTALQTVDD------PFQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~--~~V~~-l~~s~~~~~l~s~~~------d~~i~vwd~~~~~~~~ 259 (812)
+..|+.++.|+.|..+|..+++..-. ..+..+. ..+.+ ... .++ .++.++. ++.|..+|..++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~--~~~~~~~~~~~~~~~P~v-~~g-~v~vg~~~~~~~~~g~v~a~D~~tG---- 186 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWE--VEVCDPKVGSTLTQAPFV-AKD-TVLMGCSGAELGVRGAVNAFDLKTG---- 186 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEE--EECCCGGGTCBCCSCCEE-ETT-EEEEECBCGGGTCCCEEEEEETTTC----
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEE--ecCCCCCccceeccCCEE-ECC-EEEEEecCCccCCCCEEEEEECCCC----
Confidence 45677777789999999888764211 1111111 12221 111 134 4555543 789999999887
Q ss_pred CCCCCceEEcCCCC-------------------------------------cE-EEEEecCCCCCEEEEEeCC-------
Q psy4510 260 IPTPPLFSFSGHLT-------------------------------------EG-FAMDWSSTEPGVLATGDCK------- 294 (812)
Q Consensus 260 ~~~~~~~~~~~h~~-------------------------------------~v-~~l~~sp~~~~~l~sg~~d------- 294 (812)
+.+.++..... .+ ..+++.+.. +++..+..+
T Consensus 187 ---~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~-g~vy~~~g~~~~~~~~ 262 (571)
T 2ad6_A 187 ---ELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKL-NLFYYGSGNPAPWNET 262 (571)
T ss_dssp ---CEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTT-TEEEEECCCCSCSCGG
T ss_pred ---cEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCC-CeEEEECCCCccccCC
Confidence 33333321110 00 134555655 566555432
Q ss_pred ---------CcEEEEeCCCCCc-ceecccc-----ccCCCCCEEEEEEcCCCC--eEEEEEECCCeEEEEECCCCCcccc
Q psy4510 295 ---------RNIHIWTPREAGA-WQVDQKP-----LVGHTNSVEDLQWSPGEK--RVLASCSVDLSIRIWDTRVINTKSC 357 (812)
Q Consensus 295 ---------g~i~vwd~~~~~~-~~~~~~~-----~~~h~~~v~~~~~~p~~~--~~l~s~~~dg~i~iwd~~~~~~~~~ 357 (812)
+.|..+|..+++. |...... +.....++. +...++|+ .+++.++.+|.+.++|.++++..
T Consensus 263 ~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l-~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~-- 339 (571)
T 2ad6_A 263 MRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVL-TDQPVNGKMTPLLSHIDRNGILYTLNRENGNLI-- 339 (571)
T ss_dssp GSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEE-EEEEETTEEEEEEEEECTTSEEEEEETTTCCEE--
T ss_pred ccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEE-EecccCCcEEEEEEEeCCCcEEEEEECCCCCEE--
Confidence 3589999988874 2211110 001122222 22224564 36778889999999998865432
Q ss_pred eeecCCcC------------CCCe--------------------------EEEEEcCCCCEEEEEe--------------
Q psy4510 358 MLTLPNAH------------TSDV--------------------------NVISWNRTEPLIVSGG-------------- 385 (812)
Q Consensus 358 ~~~~~~~~------------~~~v--------------------------~~l~~~~~~~~l~sg~-------------- 385 (812)
....... ..++ ..++++|+..++++..
T Consensus 340 -w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~ 418 (571)
T 2ad6_A 340 -VAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPY 418 (571)
T ss_dssp -EEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCC
T ss_pred -eeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhcccccccccccc
Confidence 2111110 0011 2457788777666553
Q ss_pred -----------------------CCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 386 -----------------------DDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 386 -----------------------~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
.+|.|..||+. +++.+.++... .++.+..+...+ .+++.++.|+.|+.+|..
T Consensus 419 ~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~---tG~~~W~~~~~-~~~~~~~~~t~g-g~v~~g~~dg~l~a~D~~ 493 (571)
T 2ad6_A 419 RAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLT---TGKAKWTKWEK-FAAWGGTLYTKG-GLVWYATLDGYLKALDNK 493 (571)
T ss_dssp CTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTT---TCCEEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETT
T ss_pred ccCCccccccceeccCccccCCCCCCeEEEEECC---CCCEEEEecCC-CCccceeEEECC-CEEEEEcCCCeEEEEECC
Confidence 34789999987 46666665432 222222222233 367778999999999999
Q ss_pred CCC
Q psy4510 443 VER 445 (812)
Q Consensus 443 ~~~ 445 (812)
+++
T Consensus 494 tG~ 496 (571)
T 2ad6_A 494 DGK 496 (571)
T ss_dssp TCC
T ss_pred CCC
Confidence 884
No 290
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.54 E-value=0.029 Score=62.15 Aligned_cols=54 Identities=19% Similarity=0.219 Sum_probs=35.1
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
+|.|..||+. +++.+.+..... ++..-.....+ .+++.++.|+.++.||.++++
T Consensus 465 ~G~l~A~D~~---tG~~~W~~~~~~-~~~~g~~~tag-glvf~g~~dg~l~A~D~~tG~ 518 (582)
T 1flg_A 465 VGSLRAMDPV---SGKVVWEHKEHL-PLWAGVLATAG-NLVFTGTGDGYFKAFDAKSGK 518 (582)
T ss_dssp SEEEEEECTT---TCCEEEEEEESS-CCCSCCEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred cceEEEEECC---CCCEEEEecCCC-CCcccceEeCC-CEEEEECCCCcEEEEECCCCC
Confidence 5789999997 466665554332 22111111223 477779999999999999884
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.48 E-value=0.03 Score=64.01 Aligned_cols=204 Identities=10% Similarity=-0.054 Sum_probs=122.0
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~ 255 (812)
..+.+++|.+..+.++++-...+.|+.+++............+.........|++.+.+..|..+. ..+.|.+.++...
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~ 503 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 503 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSS
T ss_pred CceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCCCC
Confidence 567889999855566667677788988888753211012222333445677899998887666554 5778999988752
Q ss_pred CCCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeC--CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCC
Q psy4510 256 KGPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDC--KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 256 ~~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
...++ ........+|++.|.+ +.|+.... .+.|.+.++..... ...+...-...+.|++.+.+.
T Consensus 504 --------~~~~l~~~~l~~P~gIaVDp~~-g~LYwtD~g~~~~I~~~~~dG~~~----~~lv~~~l~~P~GLavD~~~~ 570 (791)
T 3m0c_C 504 --------KRKTLFRENGSKPRAIVVDPVH-GFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSG 570 (791)
T ss_dssp --------SEEEEEECTTCCEEEEEEETTT-TEEEEEECSSSCEEEEEETTSCCE----EEEECSSCSCEEEEEEETTTT
T ss_pred --------eEEEEEeCCCCCcceEEEecCC-CCEEEecCCCCCeEEEEecCCCce----EEEEeCCCCCceEEEEecCCC
Confidence 22333 2334568899999986 45555443 26788888875442 111222335788999998888
Q ss_pred eEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 333 RVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
.|+++-...+.|...++...... .+... ...-.....|++.. +.++++-...+.|...|..
T Consensus 571 ~LYwaD~~~~~I~~~d~dG~~~~-~v~~~-~~~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~ 631 (791)
T 3m0c_C 571 RLYWVDSKLHSISSIDVNGGNRK-TILED-EKRLAHPFSLAVFE-DKVFWTDIINEAIFSANRL 631 (791)
T ss_dssp EEEEEETTTTEEEEEETTSCSCE-EEEEC-TTTTSSEEEEEEET-TEEEEEETTTTEEEEEETT
T ss_pred eEEEEeCCCCcEEEEecCCCceE-EEecC-CCccCCCCEEEEeC-CEEEEEECCCCEEEEEeCC
Confidence 76666666788999998643221 12111 11222345666532 2345555556777777755
No 292
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=97.47 E-value=0.071 Score=52.49 Aligned_cols=240 Identities=13% Similarity=0.164 Sum_probs=149.8
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+-.+| ..+.||.-. ..++.|+|+++..+. +...- ...|.-=.|-.... |+-. .+..+.-|++...
T Consensus 72 AIMnP-~~~ViALra-g~~LQiFnletK~kl----ks~~~-~e~VvfWkWis~~~-L~lV-T~taVyHWs~~~~------ 136 (365)
T 2xzh_A 72 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKM----KAHTM-TDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 136 (365)
T ss_dssp EEECS-SSSEEEEEE-TTEEEEEETTTTEEE----EEEEC-SSCEEEEEECSSSE-EEEE-ESSEEEEEESSTT------
T ss_pred eeeCC-CccEEEEec-CCeEEEechHHhhhh----cceec-CCccEEEEecCCCe-EEEE-cCCcEEEEcccCC------
Confidence 34577 777777665 468999999886532 11111 23555556654443 3222 3467999999763
Q ss_pred CCCceEEcCCC----CcEEEEEecCCCCCEEEEEe------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc--C
Q psy4510 262 TPPLFSFSGHL----TEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS--P 329 (812)
Q Consensus 262 ~~~~~~~~~h~----~~v~~l~~sp~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--p 329 (812)
..|...+..|. ..|..-.-+++.+-++++|- -.|.+.+|..+.. ..+.+.||.+....+... +
T Consensus 137 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~-----~sQ~ieGhaa~F~~~~~~g~~ 211 (365)
T 2xzh_A 137 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK-----VSQPIEGHAASFAQFKMEGNA 211 (365)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT-----EEEEECCSEEEEEEECCTTCS
T ss_pred CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc-----ccceeeeeeeeeEEEecCCCC
Confidence 47888777765 46778888888855555553 2478999998876 367778886655444332 1
Q ss_pred CCCeEEEEEECC---CeEEEEECCCCC-cccc----eee--cC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 330 GEKRVLASCSVD---LSIRIWDTRVIN-TKSC----MLT--LP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 330 ~~~~~l~s~~~d---g~i~iwd~~~~~-~~~~----~~~--~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
....+|+-+... +.++|-++.... .... ... ++ .+...--.++..++.-..++.-+.-|.|++||+.
T Consensus 212 ~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~ihlyDle-- 289 (365)
T 2xzh_A 212 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 289 (365)
T ss_dssp SCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSEEEEEETT--
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcEEEEEEcc--
Confidence 222345544432 589999985431 1111 111 11 1223445677788777788888999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++.++..-+-....|..-+-+.... =++.....|+|.--.++...
T Consensus 290 -Tgt~i~~nrIS~d~iF~ta~~~~~~-Gi~~Vnr~GqVl~v~v~~~~ 334 (365)
T 2xzh_A 290 -TGTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVEEEN 334 (365)
T ss_dssp -TCCEEEEEECCSSCEEEEEEEGGGT-EEEEEETTCEEEEEEECTTT
T ss_pred -cCcEEEEeccCCCceEEecccCCCC-cEEEEcCCCEEEEEEECccc
Confidence 6777777666677776555544432 34555578877776666543
No 293
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.46 E-value=0.022 Score=60.56 Aligned_cols=156 Identities=12% Similarity=0.050 Sum_probs=96.5
Q ss_pred CeeeeeEcC-CCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC-CC----cEE
Q psy4510 225 SAEDLQWSD-LKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC-KR----NIH 298 (812)
Q Consensus 225 ~V~~l~~s~-~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~-dg----~i~ 298 (812)
....|+++| ++..|..+...+.|+.+++..+ .+..+.........|+|++++ +.|+.+.. .+ .+.
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~--------~v~~~~~~~~~P~~ia~d~~G-~~lyvad~~~~~~~~~v~ 208 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKE--------YVSTVYSGLSKVRTICWTHEA-DSMIITNDQNNNDRPNNY 208 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTT--------EEEEEECCCSCEEEEEECTTS-SEEEEEECCSCTTSEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCC--------EEEEEecCCCCcceEEEeCCC-CEEEEEeCCCCcccceEE
Confidence 457889998 4666766665588888988763 344444455668899999998 54444443 22 233
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
+.+.. +.. . ....+. .......++++|++..++++-..++.|..++...... ..+... ......+.|+|+|++
T Consensus 209 ~~~~~-g~~-~-~~~~l~-~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~-~~~~~~--~~~~~P~gia~~pdG 281 (430)
T 3tc9_A 209 ILTRE-SGF-K-VITELT-KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET-TPLFTI--QDSGWEFHIQFHPSG 281 (430)
T ss_dssp EEEGG-GTS-C-SEEEEE-ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE-EEEEEC--SSSSCCEEEEECTTS
T ss_pred EEeCC-Cce-e-eeeeec-cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE-EEEEEc--CCCCcceeEEEcCCC
Confidence 34432 221 0 001111 1234578889994444777777789999999874221 112222 222456889999999
Q ss_pred C-EEEEEeCCCcEEEEecC
Q psy4510 379 P-LIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~ 396 (812)
+ ++++-...+.|..++..
T Consensus 282 ~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 282 NYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp SEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEeCC
Confidence 9 55555667889998875
No 294
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.45 E-value=0.024 Score=60.38 Aligned_cols=260 Identities=8% Similarity=0.016 Sum_probs=145.1
Q ss_pred CceEEEEeCCC-CCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeE-------cCCCCcEEEeeCCC---
Q psy4510 177 TEGFAMDWSST-EPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQW-------SDLKTALQTVDDPF--- 245 (812)
Q Consensus 177 ~~i~~~~~sp~-~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~-------s~~~~~l~s~~~d~--- 245 (812)
.....|+|+|. .++++++-...+.|++.|+.+..... ....-.........|+| ++++++|+.+...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~-l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSS-PLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEE-EECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEE-EEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 35678999983 35555665555678888877654211 11111112346889999 99999777666543
Q ss_pred ----ceEEeeCCCCCCCCCCCCC-ceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC-------CCCcceec--
Q psy4510 246 ----QLAEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR-------EAGAWQVD-- 311 (812)
Q Consensus 246 ----~i~vwd~~~~~~~~~~~~~-~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~-------~~~~~~~~-- 311 (812)
.+.+.+..... .....+ ...+.. -....+++.+|++..++++-..++.|..+|+. ++..|...
T Consensus 218 ~~~~~V~~i~r~~~G--~~~~~~~~~~v~~-~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~ 294 (496)
T 3kya_A 218 DESPSVYIIKRNADG--TFDDRSDIQLIAA-YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVK 294 (496)
T ss_dssp GGEEEEEEEECCTTS--CCSTTSCEEEEEE-ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGG
T ss_pred ccCceEEEEecCCCC--ceeecccceeecc-CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccc
Confidence 24455433210 000001 012221 12345788899764666777778889999987 44421000
Q ss_pred -----ccc-c-cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc----cceeecC--Cc---------CCCCe
Q psy4510 312 -----QKP-L-VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLP--NA---------HTSDV 369 (812)
Q Consensus 312 -----~~~-~-~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~--~~---------~~~~v 369 (812)
... + .+.......|+|+|+++.++++-+....|+.++....... ..+.... .+ .-...
T Consensus 295 ~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P 374 (496)
T 3kya_A 295 NNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNP 374 (496)
T ss_dssp GCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSE
T ss_pred ccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCC
Confidence 001 1 1223456899999999966666677889998665321100 0011000 00 01123
Q ss_pred E-EEEEc-------CCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccC------------------------CCCEEEE
Q psy4510 370 N-VISWN-------RTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHH------------------------TAPVTTV 417 (812)
Q Consensus 370 ~-~l~~~-------~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h------------------------~~~v~~v 417 (812)
. .++.. +.+.++++=.....|+.++.. + .+.++-+. -.....|
T Consensus 375 ~~gv~vd~~~~~~~~~g~lyVaD~~N~rIr~i~~~----G-~v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gI 449 (496)
T 3kya_A 375 CQGVFVKNPDYTGEEEYDFYFVDRLNFCVRKVTPE----G-IVSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGL 449 (496)
T ss_dssp EEEEEEECTTCCSSCCEEEEEEEGGGTEEEEECTT----C-BEEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEE
T ss_pred eEEEEEccccccccCCCeEEEEECCCCEEEEEeCC----C-CEEEEecccccccccCccccccCCCCchhhhhcCCCcEE
Confidence 3 44443 456666766777889999842 3 34443221 1235789
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++.+++..++++=...++|+.+++....
T Consensus 450 avd~~~g~lyVaD~~N~rIrki~~~~~~ 477 (496)
T 3kya_A 450 VYDDVKEMFYVHDQVGHTIRTISMEQEE 477 (496)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECCCC
T ss_pred EEECCCCEEEEEeCCCCEEEEEECCCCc
Confidence 9998633555655667789999987764
No 295
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.44 E-value=0.015 Score=64.35 Aligned_cols=54 Identities=13% Similarity=-0.006 Sum_probs=33.3
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
.|.|..||+. +++.+...... .++.+-.....+ .+++.++.|+.|+.||.++++
T Consensus 452 ~G~l~A~D~~---tG~~~W~~~~~-~~~~~g~~~tag-g~vf~gt~dg~l~A~D~~tG~ 505 (599)
T 1w6s_A 452 LGQIKAYNAI---TGDYKWEKMER-FAVWGGTMATAG-DLVFYGTLDGYLKARDSDTGD 505 (599)
T ss_dssp CEEEEEECTT---TCCEEEEEEES-SCCCSBCEEETT-TEEEEECTTSEEEEEETTTCC
T ss_pred cCeEEEEECC---CCCEEeEecCC-CCccCcceEecC-CEEEEECCCCeEEEEECCCCC
Confidence 4678888887 45555555321 111111111223 467778999999999999984
No 296
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.38 E-value=0.0013 Score=74.92 Aligned_cols=205 Identities=9% Similarity=-0.101 Sum_probs=114.7
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEe-eCCCceEEeeCCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTV-DDPFQLAEHNKKRG 255 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~-~~d~~i~vwd~~~~ 255 (812)
..+..++|++..+.++++-...+.|+.+++.+..........+.........|++.+.+..|..+ ...+.|.+.++...
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~ 485 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGV 485 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSC
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCC
Confidence 34567889883344445555668899998875210000112222222345678888665555444 45678999887752
Q ss_pred CCCCCCCCCceEEc-CCCCcEEEEEecCCCCCEEEEEeC-CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCe
Q psy4510 256 KGPGIPTPPLFSFS-GHLTEGFAMDWSSTEPGVLATGDC-KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 256 ~~~~~~~~~~~~~~-~h~~~v~~l~~sp~~~~~l~sg~~-dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
....+. ........|++.|.+..++++-.. .+.|.+.++..... .......-...+.|+|+|++..
T Consensus 486 --------~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~----~~l~~~~l~~PnGlavd~~~~~ 553 (699)
T 1n7d_A 486 --------KRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI----YSLVTENIQWPNGITLDLLSGR 553 (699)
T ss_dssp --------CEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC----CEESCSSCSSCCCEEECTTTCC
T ss_pred --------ceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe----eEEEeCCCCCccEEEEeccCCE
Confidence 223332 222445788999976334444322 26788777764431 1111122345678999998877
Q ss_pred EEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecC
Q psy4510 334 VLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++++-+..+.|..+++.... ...+... .........|++..+ .++++....+.|..++..
T Consensus 554 LY~aD~~~~~I~~~d~dG~~-~~~~~~~-~~~~~~P~glavd~~-~lywtd~~~~~V~~~d~~ 613 (699)
T 1n7d_A 554 LYWVDSKLHSISSIDVNGGN-RKTILED-EKRLAHPFSLAVFED-KVFWTDIINEAIFSANRL 613 (699)
T ss_dssp EEEEETTTTEEEEECSSSSC-CEEECCC-SSSCSSCCCCEEETT-EEEEECSTTTCEEEEETT
T ss_pred EEEEecCCCeEEEEccCCCc-eEEEEec-CCcCCCceEeEEECC-EEEEEeCCCCeEEEEEcc
Confidence 77777778899999986422 1112111 111122334455433 455565667888888875
No 297
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.26 E-value=0.055 Score=57.44 Aligned_cols=200 Identities=9% Similarity=0.022 Sum_probs=113.4
Q ss_pred CeeeeeEcCC--CCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC---C-cEE
Q psy4510 225 SAEDLQWSDL--KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK---R-NIH 298 (812)
Q Consensus 225 ~V~~l~~s~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d---g-~i~ 298 (812)
....|+|+|+ +..|..+...+.|+.++..++ .+..+........+++|++++ .++++.... . .+.
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g--------~v~~~~~~~~~P~giavd~dG-~lyVad~~~~~~~~gv~ 210 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQ--------YVDIKTTNIGQCADVNFTLNG-DMVVVDDQSSDTNTGIY 210 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTT--------EEEEECCCCSCEEEEEECTTC-CEEEEECCSCTTSEEEE
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCC--------EEEEeecCCCCccEEEECCCC-CEEEEcCCCCcccceEE
Confidence 4568999984 445655554488999998663 344454455668999999999 555554321 1 133
Q ss_pred EEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCC
Q psy4510 299 IWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 299 vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~ 378 (812)
..+....... ...+. .......++++|.+..++++-..++.|+.+|..++.....+... .....-..++|+|++
T Consensus 211 ~~~~~~~~~~---~~~~~-~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~--~~~~~~~~ia~dpdG 284 (433)
T 4hw6_A 211 LFTRASGFTE---RLSLC-NARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMM--DTKGSNFHIVWHPTG 284 (433)
T ss_dssp EECGGGTTCC---EEEEE-ECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEEC--SCCSSCEEEEECTTS
T ss_pred EEECCCCeec---ccccc-ccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEecc--CCCCCcccEEEeCCC
Confidence 3332221110 01111 23345778999944446666667788999998643221112222 122234579999999
Q ss_pred C-EEEEEeCCCcEEEEecCCCCCCC--ceEEcccC---------------CCCEEEEEE---------ccCCCcEEEEEE
Q psy4510 379 P-LIVSGGDDGCIHVWDLRRFKKGS--SVATFKHH---------------TAPVTTVEW---------HPTESSTFASGG 431 (812)
Q Consensus 379 ~-~l~sg~~dg~i~iwd~~~~~~~~--~~~~~~~h---------------~~~v~~v~~---------~p~~~~~l~s~~ 431 (812)
+ ++++-...+.|+.+++.... +. ....+.+. -.....+++ .+.+ .++++-.
T Consensus 285 ~~LYvad~~~~~I~~~~~d~~~-~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g-~lyvaD~ 362 (433)
T 4hw6_A 285 DWAYIIYNGKHCIYRVDYNRET-GKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEY-DFYFCDR 362 (433)
T ss_dssp SEEEEEETTTTEEEEEEBCTTT-CCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCE-EEEEEET
T ss_pred CEEEEEeCCCCEEEEEeCCCCC-cccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCC-cEEEEEC
Confidence 8 55555567889998865210 11 01111111 123567888 5544 4555555
Q ss_pred CCCCEEEEEc
Q psy4510 432 ADDQIALWDL 441 (812)
Q Consensus 432 ~dg~v~iwd~ 441 (812)
..++|+.++.
T Consensus 363 ~n~~I~~~~~ 372 (433)
T 4hw6_A 363 DSHTVRVLTP 372 (433)
T ss_dssp TTTEEEEECT
T ss_pred CCCEEEEECC
Confidence 5678888874
No 298
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.24 E-value=0.035 Score=57.21 Aligned_cols=246 Identities=12% Similarity=0.086 Sum_probs=121.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcc-cccccccCCCCCCeeeeeEcCC---CCcEEEeeC-C-----Cc
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAW-QVDQKPLGGHTNSAEDLQWSDL---KTALQTVDD-P-----FQ 246 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~-~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~-d-----~~ 246 (812)
...+.++|.| +|+++++-. .|.|++++ .+... ................|+|+|+ +..|..+.. . +.
T Consensus 31 ~~P~~ia~~p-dG~l~V~e~-~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 31 EVPWALAFLP-DGGMLIAER-PGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp SCEEEEEECT-TSCEEEEET-TTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCceEEEEcC-CCeEEEEeC-CCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 4567899999 998666654 58999998 22211 0001112223456789999998 555554443 2 56
Q ss_pred eEEeeCCCCCCCCCCCCCceE-Ec---CCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc--
Q psy4510 247 LAEHNKKRGKGPGIPTPPLFS-FS---GHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA-- 307 (812)
Q Consensus 247 i~vwd~~~~~~~~~~~~~~~~-~~---~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~-- 307 (812)
|..++...+.. . ..+.+.. +. +.......|+|.|+| .+.++-+. .|.|.-++....-.
T Consensus 107 v~r~~~~~~~~-~-~~~~l~~~~p~~~~~~h~~~~l~~~pdG-~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 107 VVRLRHLGERG-V-LDRVVLDGIPARPHGLHSGGRIAFGPDG-MLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEECSSCE-E-EEEEEEEEECCCTTCCCCCCCEEECTTS-CEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred EEEEEeCCCCc-C-ceEEEEEeCCCCCCCCcCCceEEECCCC-CEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 77777654200 0 0011111 32 111123589999998 55555322 14555555542100
Q ss_pred --c-----eeccccccCCCCCEEEEEEcC-CCCeEEEEEECCCeE------EEEECCCCCc---------------ccce
Q psy4510 308 --W-----QVDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDLSI------RIWDTRVINT---------------KSCM 358 (812)
Q Consensus 308 --~-----~~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg~i------~iwd~~~~~~---------------~~~~ 358 (812)
. ........++ .....++|+| ++. ++++-.....+ .|.-+..+.. ..++
T Consensus 184 npf~~~~~~~~~i~a~G~-rnp~g~a~d~~~g~-l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~ 261 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGH-RNPQGLAWHPKTGE-LFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPL 261 (352)
T ss_dssp CTTTTCTTSCTTEEEECC-SEECCCEECTTTCC-EEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCS
T ss_pred CcccCCCCCCccEEEEcC-CCcccEEEECCCCC-EEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCe
Confidence 0 0000011122 2357889999 555 55554433331 1222222110 1112
Q ss_pred eecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC---CceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 359 LTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG---SSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 359 ~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~---~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
..+ .+......++| .+|.++++....+.|...++...... .....+..-...+..+++.|+|..++++...+|
T Consensus 262 ~~~--~~~~ap~G~~~-~~G~l~v~~~~~~~v~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~~~~~~g 337 (352)
T 2ism_A 262 YFW--PQGFPPGNLAF-FRGDLYVAGLRGQALLRLVLEGERGRWRVLRVETALSGFGRLREVQVGPDGALYVTTSNRDG 337 (352)
T ss_dssp EEC--TTCCCEEEEEE-ETTEEEEEETTTTEEEEEEEEEETTEEEEEEEEEEEESSCCEEEEEECTTSCEEEEECSTTT
T ss_pred Eec--CCCCCCcceEE-ECCEEEEEECCCCEEEEEEECCCCcceeecchheecccCCCeeEEEECCCCcEEEEEeCCCC
Confidence 222 22234567777 45666666666777888877631110 001222222457899999999853333333333
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=97.17 E-value=0.27 Score=50.46 Aligned_cols=240 Identities=14% Similarity=0.167 Sum_probs=152.0
Q ss_pred EEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 182 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 182 ~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
+-.+| ..++||.-. ..++.|||+++..+. +...- ...|.-=.|-.+.. |+-. .+..|.-|++...
T Consensus 71 AIMnP-~~~iiALra-g~~lQiFnle~K~kl----ks~~~-~e~VvfWkWis~~~-l~lV-T~taVyHWsi~~~------ 135 (494)
T 1bpo_A 71 AIMNP-ASKVIALKA-GKTLQIFNIEMKSKM----KAHTM-TDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 135 (494)
T ss_dssp EEECS-SSSCEEEEE-TTEEEEEETTTTEEE----EEEEC-SSCCCEEEEEETTE-EEEE-CSSEEEEEESSSS------
T ss_pred eeeCC-CCcEEEEec-CCeEEEEchHHhhhh----cceec-CCCceEEEecCCCe-EEEE-cCCeeEEecccCC------
Confidence 44567 667777655 468999999876532 21111 23455555544433 3222 4577999999763
Q ss_pred CCCceEEcCCC----CcEEEEEecCCCCCEEEEEe------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC-
Q psy4510 262 TPPLFSFSGHL----TEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG- 330 (812)
Q Consensus 262 ~~~~~~~~~h~----~~v~~l~~sp~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~- 330 (812)
..|...|..|. ..|..-.-+++.+-++++|- -.|.+.+|..+... .+.+.||.+....+...-+
T Consensus 136 s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-----sQ~ieGhaa~F~~~~~~g~~ 210 (494)
T 1bpo_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNA 210 (494)
T ss_dssp CCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCC-----EEEECCSEEEEEEEECTTCS
T ss_pred CCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccc-----cchheeeeeeeEEEecCCCC
Confidence 47888787765 46778888888855555553 25789999998774 6778888776655544322
Q ss_pred -CCeEEEEEECC---CeEEEEECCCCCccc-----ceee--cC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 331 -EKRVLASCSVD---LSIRIWDTRVINTKS-----CMLT--LP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 331 -~~~~l~s~~~d---g~i~iwd~~~~~~~~-----~~~~--~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
...+|+.+... +.++|-++....... .... ++ .+...--.++..++.-.+++.-+.-|.|++||+.
T Consensus 211 ~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G~i~lyDle-- 288 (494)
T 1bpo_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 288 (494)
T ss_dssp SEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTSEEEEEETT--
T ss_pred CCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCceEEEEecc--
Confidence 22355555543 789999986431111 0111 11 1223445678888887888888999999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
++..+..-+-....|..-+-+.... =++.....|.|.--.+....
T Consensus 289 -Tgt~i~~nrIs~~~iF~t~~~~~~~-Gi~~Vnr~GqVl~v~v~e~~ 333 (494)
T 1bpo_A 289 -TGTCIYMNRISGETIFVTAPHEATA-GIIGVNRKGQVLSVCVEEEN 333 (494)
T ss_dssp -TCCEEEEEECCSSCEEEEEEETTTT-EEEEEETTCEEEEEEECTTT
T ss_pred -cceeeeeecccCCceEEecccCCCC-cEEEEccCceEEEEEEcccc
Confidence 5777777666667776655554433 34555577877776666543
No 300
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.15 E-value=0.18 Score=53.82 Aligned_cols=120 Identities=12% Similarity=0.127 Sum_probs=71.5
Q ss_pred CEEEEEEcC-CCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE-------cCCCCEEEEEeCCC-c--
Q psy4510 321 SVEDLQWSP-GEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW-------NRTEPLIVSGGDDG-C-- 389 (812)
Q Consensus 321 ~v~~~~~~p-~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~-------~~~~~~l~sg~~dg-~-- 389 (812)
....|+|.| ++.+++++....+.|++.|+...... .+.............|+| ++++..|+++...+ .
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~-~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLS-SPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEE-EEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEE-EEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 578999999 46656666666678999998743211 111111112235899999 99998555555443 2
Q ss_pred ----EEEEecCCCCCCC--c-eEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 390 ----IHVWDLRRFKKGS--S-VATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 390 ----i~iwd~~~~~~~~--~-~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
|.+++......-. . ...+.... ....++++|++..++++-..++.|..+|+.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 6666633200111 0 01222112 235778899766677777778889999986
No 301
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.13 E-value=0.062 Score=53.99 Aligned_cols=198 Identities=12% Similarity=0.089 Sum_probs=120.2
Q ss_pred CCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCC----CCC--EEEEEeC---CCcEEEEeCC
Q psy4510 233 DLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSST----EPG--VLATGDC---KRNIHIWTPR 303 (812)
Q Consensus 233 ~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~----~~~--~l~sg~~---dg~i~vwd~~ 303 (812)
|...+++.....+-+.+||+.. +.+..+.. +.++.+..-|. +.. ++++... +++|++|++.
T Consensus 38 p~~s~ii~t~k~~gL~Vydl~G--------~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iD 107 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSLDG--------KMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAID 107 (355)
T ss_dssp GGGCEEEEEETTTEEEEEETTS--------CEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEEC
T ss_pred CCccEEEEEcCCCCEEEEcCCC--------cEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEEC
Confidence 4445566667788999999943 66666653 56777776662 111 3333333 4789999774
Q ss_pred CCC-cceeccc---cccCCCCCEEEEEE--cCC-CCeEEEEEECCCeEEEEECCCC----CcccceeecCCcCCCCeEEE
Q psy4510 304 EAG-AWQVDQK---PLVGHTNSVEDLQW--SPG-EKRVLASCSVDLSIRIWDTRVI----NTKSCMLTLPNAHTSDVNVI 372 (812)
Q Consensus 304 ~~~-~~~~~~~---~~~~h~~~v~~~~~--~p~-~~~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~v~~l 372 (812)
... ....... ++..-...+..+|+ +|. +..+++....+|.+..|++... -..+.+.++. -.+.+..|
T Consensus 108 p~~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~--lgsq~Egc 185 (355)
T 3amr_A 108 GKNGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK--MNSQTEGM 185 (355)
T ss_dssp TTTCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE--CSSCEEEE
T ss_pred CCCCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec--CCCCcceE
Confidence 222 1111101 11111156677888 774 4445777778899999998432 1233445552 24578888
Q ss_pred EEcCCCCEEEEEeCCCcEEEEecCCCC--CCCceEEcc-c-CCCCEEEEEEc--cCCCcEEEEEE-CCCCEEEEEcC
Q psy4510 373 SWNRTEPLIVSGGDDGCIHVWDLRRFK--KGSSVATFK-H-HTAPVTTVEWH--PTESSTFASGG-ADDQIALWDLA 442 (812)
Q Consensus 373 ~~~~~~~~l~sg~~dg~i~iwd~~~~~--~~~~~~~~~-~-h~~~v~~v~~~--p~~~~~l~s~~-~dg~v~iwd~~ 442 (812)
...+....|+.+-.+.-|..++.+... ..+.+..+. + -...+..|++- +++..+|++++ .++++.+||..
T Consensus 186 vvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 186 AADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESS
T ss_pred EEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECC
Confidence 888888899999998777777754311 223444442 2 23478888884 44443555555 57799999986
No 302
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.10 E-value=0.093 Score=52.72 Aligned_cols=202 Identities=9% Similarity=0.068 Sum_probs=117.1
Q ss_pred CCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC----CCc--EEEee--C--CCceEEeeCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL----KTA--LQTVD--D--PFQLAEHNKKRGKGP 258 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~----~~~--l~s~~--~--d~~i~vwd~~~~~~~ 258 (812)
..+++.....+-+.+||+ .++ .+..+.. +.+..+..-|. |+. |+.++ . ++.|++|++...
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~----~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~--- 109 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGK----MLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGK--- 109 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSC----EEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTT---
T ss_pred ccEEEEEcCCCCEEEEcC-CCc----EEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCC---
Confidence 344554455678999999 444 3333432 45555555442 222 33333 3 578999977532
Q ss_pred CCCCCCceEEcC------CC-CcEEEEEe--cCCCC-CEEEEEeCCCcEEEEeCCC---CCcceeccccccCCCCCEEEE
Q psy4510 259 GIPTPPLFSFSG------HL-TEGFAMDW--SSTEP-GVLATGDCKRNIHIWTPRE---AGAWQVDQKPLVGHTNSVEDL 325 (812)
Q Consensus 259 ~~~~~~~~~~~~------h~-~~v~~l~~--sp~~~-~~l~sg~~dg~i~vwd~~~---~~~~~~~~~~~~~h~~~v~~~ 325 (812)
..++..+.. .. ..++.+++ +|... .++++...+|.+..|++.. +.......+.+. ..+.+..|
T Consensus 110 ---~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~-lgsq~Egc 185 (355)
T 3amr_A 110 ---NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFK-MNSQTEGM 185 (355)
T ss_dssp ---TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEE-CSSCEEEE
T ss_pred ---CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEec-CCCCcceE
Confidence 123333321 11 56677777 77542 3688888899999999843 211122334443 34578999
Q ss_pred EEcCCCCeEEEEEECCCeEEEEECCCCC--cccceeecCCcC-CCCeEEEEE--cCCCC-EEEEEe-CCCcEEEEecCCC
Q psy4510 326 QWSPGEKRVLASCSVDLSIRIWDTRVIN--TKSCMLTLPNAH-TSDVNVISW--NRTEP-LIVSGG-DDGCIHVWDLRRF 398 (812)
Q Consensus 326 ~~~p~~~~~l~s~~~dg~i~iwd~~~~~--~~~~~~~~~~~~-~~~v~~l~~--~~~~~-~l~sg~-~dg~i~iwd~~~~ 398 (812)
...+... .|+.+-.+.-|..++.+... ....+..+..++ ...+..|+. .++++ +|++.+ .+.++.+||...
T Consensus 186 vvDd~~g-~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~- 263 (355)
T 3amr_A 186 AADDEYG-RLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQG- 263 (355)
T ss_dssp EEETTTT-EEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESST-
T ss_pred EEcCCCC-eEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCC-
Confidence 9998777 48888888776666644221 222333332222 347888888 45555 555554 677999999963
Q ss_pred CCCCceEEc
Q psy4510 399 KKGSSVATF 407 (812)
Q Consensus 399 ~~~~~~~~~ 407 (812)
+.+.+..|
T Consensus 264 -~~~~vg~f 271 (355)
T 3amr_A 264 -KNKYVADF 271 (355)
T ss_dssp -TCCEEEEE
T ss_pred -CCcEEEEE
Confidence 33444444
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.08 E-value=0.0035 Score=71.28 Aligned_cols=224 Identities=9% Similarity=-0.023 Sum_probs=124.9
Q ss_pred CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEee-CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 199 RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVD-DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 199 g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~-~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
+.|++.++.+... . .+......+.+|+|.+.+..|..+. ..+.|+.+++...... ......+.........
T Consensus 386 ~~I~~id~~~~~~----~-~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~---~~~~~~i~~~~~~P~g 457 (699)
T 1n7d_A 386 HEVRKMTLDRSEY----T-SLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGV---SSYDTVISRDIQAPDG 457 (699)
T ss_dssp TC-CEECTTSCCE----E-CCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC----CCCCCBCCSCC--CCC
T ss_pred cceEEEeCCCCcc----e-eeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCC---cceEEEEeCCCCCcce
Confidence 4677777765431 1 1222234567899998877777665 4678888888751000 0111111111123456
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECC-CeEEEEECCCCCccc
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVD-LSIRIWDTRVINTKS 356 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~d-g~i~iwd~~~~~~~~ 356 (812)
|++.+.+..++++-...+.|.+.++..... ...+.........|++.|.+..++++-... +.|...++.... .
T Consensus 458 lavD~~~g~LY~tD~~~~~I~v~d~dg~~~----~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~-~- 531 (699)
T 1n7d_A 458 LAVDWIHSNIYWTDSVLGTVSVADTKGVKR----KTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD-I- 531 (699)
T ss_dssp EECCCSSSBCEECCTTTSCEEEEBSSSCCE----EEECCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC-C-
T ss_pred EEEEeeCCcEEEEeccCCeEEEEecCCCce----EEEEeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC-e-
Confidence 788765535555555678899999875531 111122223467889999777555554333 677777765321 1
Q ss_pred ceeecCCcCCCCeEEEEEcCCCC-EEEEEeCCCcEEEEecCCCCCCCceEEcc---cCCCCEEEEEEccCCCcEEEEEEC
Q psy4510 357 CMLTLPNAHTSDVNVISWNRTEP-LIVSGGDDGCIHVWDLRRFKKGSSVATFK---HHTAPVTTVEWHPTESSTFASGGA 432 (812)
Q Consensus 357 ~~~~~~~~~~~~v~~l~~~~~~~-~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---~h~~~v~~v~~~p~~~~~l~s~~~ 432 (812)
..+....-...+.|+|++++. ++++-+..+.|.++++.. .....+. .......+|++.. ..++++...
T Consensus 532 --~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG----~~~~~~~~~~~~~~~P~glavd~--~~lywtd~~ 603 (699)
T 1n7d_A 532 --YSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG----GNRKTILEDEKRLAHPFSLAVFE--DKVFWTDII 603 (699)
T ss_dssp --CEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS----SCCEEECCCSSSCSSCCCCEEET--TEEEEECST
T ss_pred --eEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC----CceEEEEecCCcCCCceEeEEEC--CEEEEEeCC
Confidence 111112234467899998765 555555678899999863 2222221 1112234555544 356666666
Q ss_pred CCCEEEEEcCCC
Q psy4510 433 DDQIALWDLAVE 444 (812)
Q Consensus 433 dg~v~iwd~~~~ 444 (812)
.++|..++..++
T Consensus 604 ~~~V~~~d~~~G 615 (699)
T 1n7d_A 604 NEAIFSANRLTG 615 (699)
T ss_dssp TTCEEEEETTTE
T ss_pred CCeEEEEEccCC
Confidence 788999887655
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.07 E-value=0.064 Score=55.18 Aligned_cols=240 Identities=8% Similarity=0.023 Sum_probs=118.9
Q ss_pred CceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCcc-cccc-cccCCCCCCeeeeeEcCC---CCcEEEee-C------
Q psy4510 177 TEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGAW-QVDQ-KPLGGHTNSAEDLQWSDL---KTALQTVD-D------ 243 (812)
Q Consensus 177 ~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~~-~~~~-~~l~~h~~~V~~l~~s~~---~~~l~s~~-~------ 243 (812)
...+.|+|.| +|+ ++++- ..|.|++++....... .... ............|+|+|+ +..|..+. .
T Consensus 18 ~~P~~i~~~p-dG~~l~V~e-~~G~i~~~~~~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLP-DNHGMLITL-RGGELRHWQAGKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECS-TTCCEEEEE-TTTEEEEEETTTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcC-CCCEEEEEe-CCceEEEEeCCCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4578899999 998 66554 4689999975332110 0000 111223456789999996 55554443 2
Q ss_pred -CCceEEeeCCCCCCCCCCCCCceE-E-----cCCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCC
Q psy4510 244 -PFQLAEHNKKRGKGPGIPTPPLFS-F-----SGHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPR 303 (812)
Q Consensus 244 -d~~i~vwd~~~~~~~~~~~~~~~~-~-----~~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~ 303 (812)
...|..+++..........+.+.. + ..|. ...|+|.|++ .+.++-+. .|.|.-.+..
T Consensus 96 ~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG-~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~d 172 (353)
T 2g8s_A 96 AGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKG-YLFIALGENNQRPTAQDLDKLQGKLVRLTDQ 172 (353)
T ss_dssp EEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSS-EEEEEECCTTCGGGGGCTTSCTTEEEEEETT
T ss_pred ceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCC-cEEEEECCCCCCCccCCCCCCCeEEEEECCC
Confidence 234555665432100000011111 1 1122 3579999998 45444332 2456666654
Q ss_pred CCCcc---e-----eccccc-cCCCCCEEEEEEcCCCCeEEEEEEC-CCeEEEEECCCCCc-------------------
Q psy4510 304 EAGAW---Q-----VDQKPL-VGHTNSVEDLQWSPGEKRVLASCSV-DLSIRIWDTRVINT------------------- 354 (812)
Q Consensus 304 ~~~~~---~-----~~~~~~-~~h~~~v~~~~~~p~~~~~l~s~~~-dg~i~iwd~~~~~~------------------- 354 (812)
..-.. . .....+ .+| .....++|.|....++++-.. ++.=.|.-+..+..
T Consensus 173 G~~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~~~~~ 251 (353)
T 2g8s_A 173 GEIPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGFKIPE 251 (353)
T ss_dssp SCCCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSSCCTT
T ss_pred CCCCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCCccCc
Confidence 32000 0 001111 122 346889999943334444322 21122222221110
Q ss_pred ---------ccceeecCCcCCCCeEEEEEcC-------CCCEEEEEeCCCcEEEEecCCCCCCCceEE---cccCCCCEE
Q psy4510 355 ---------KSCMLTLPNAHTSDVNVISWNR-------TEPLIVSGGDDGCIHVWDLRRFKKGSSVAT---FKHHTAPVT 415 (812)
Q Consensus 355 ---------~~~~~~~~~~~~~~v~~l~~~~-------~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~---~~~h~~~v~ 415 (812)
..++..+ .+......+.|.+ ++.++++....+.|...++.. ...+.. +......+.
T Consensus 252 ~~~~~~~~~~~P~~~~--~~~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~---~~~~~~~~~~~~~~~rp~ 326 (353)
T 2g8s_A 252 AKGEIVAGTEQPVFYW--KDSPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNG---DKVTEDGRILTDRGQRIR 326 (353)
T ss_dssp CCBSSCTTSCCCSEEE--SSCCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEET---TEEEEEEEESGGGCCCEE
T ss_pred ccCCCCCCccCCeEEe--CCCcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCC---CeEeeeEEcccCCCCcee
Confidence 0011111 1234567788864 356777776778888888763 222221 223345789
Q ss_pred EEEEccCCCcEEE
Q psy4510 416 TVEWHPTESSTFA 428 (812)
Q Consensus 416 ~v~~~p~~~~~l~ 428 (812)
.|++.|+|. +++
T Consensus 327 ~v~~~pdG~-lyv 338 (353)
T 2g8s_A 327 DVRTGPDGY-LYV 338 (353)
T ss_dssp EEEECTTSC-EEE
T ss_pred EEEECCCCc-EEE
Confidence 999999985 444
No 305
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.07 E-value=0.028 Score=55.98 Aligned_cols=203 Identities=10% Similarity=0.070 Sum_probs=118.2
Q ss_pred EEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC----CC--CCeeeeeE---cCCCCcEEEeeC--------
Q psy4510 181 AMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG----HT--NSAEDLQW---SDLKTALQTVDD-------- 243 (812)
Q Consensus 181 ~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~----h~--~~V~~l~~---s~~~~~l~s~~~-------- 243 (812)
+++|.+.++.++++.-..|+|..|+...+..... .+.+ .. ..+..|.| .++++++++...
T Consensus 17 ~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g 93 (334)
T 2p9w_A 17 DTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFAD 93 (334)
T ss_dssp CEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTS
T ss_pred CccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE---ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccc
Confidence 4789884455555555789999999875542211 2222 11 24578999 588777775442
Q ss_pred -----CCceEEeeCC---CCCCCCCCCCCceEEc--CCC-----------CcEEEEEecCCCCCEEEEEeCC-CcEEEEe
Q psy4510 244 -----PFQLAEHNKK---RGKGPGIPTPPLFSFS--GHL-----------TEGFAMDWSSTEPGVLATGDCK-RNIHIWT 301 (812)
Q Consensus 244 -----d~~i~vwd~~---~~~~~~~~~~~~~~~~--~h~-----------~~v~~l~~sp~~~~~l~sg~~d-g~i~vwd 301 (812)
+..+..+|+. ++ +.+.... ... .....++..++| +..++++.. +.|...+
T Consensus 94 ~~~~g~~~v~~~Dl~~~~tg-------~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~G-naYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 94 QSSHGASSFHSFNLPLSENS-------KPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDG-NSYVAFALGMPAIARVS 165 (334)
T ss_dssp CCSSSCCEEEEEESSCCTTC-------CCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTS-CEEEEEEESSCEEEEEC
T ss_pred cccCCCCEEEEEcCCcCCCC-------CEEEEecCccccccccccccccccCCceeEECCCC-CEEEeCCCCCCeEEEEe
Confidence 5778999998 54 4443322 211 247899999999 777888877 7776666
Q ss_pred CCCCCccee-ccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCC-c---CCCCeEEE-EEc
Q psy4510 302 PREAGAWQV-DQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPN-A---HTSDVNVI-SWN 375 (812)
Q Consensus 302 ~~~~~~~~~-~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~-~---~~~~v~~l-~~~ 375 (812)
......... ............+.|+++|++..+++.-+ .|.|..+|++..... .+ .... + .-.....| .--
T Consensus 166 pdG~~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~-~g~L~~fD~~~pv~~-~v-~~~~~G~~~~~~~~dgilp~~ 242 (334)
T 2p9w_A 166 ADGKTVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGG-PRALTAFDVSKPYAW-PE-PVKINGDFGTLSGTEKIVTVP 242 (334)
T ss_dssp TTSCCEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESS-SSSEEEEECSSSSCC-CE-ECEESSCCCCCTTEEEEEEEE
T ss_pred CCCCEEeeeeecCCCcccccCcceEEEeCCCCEEEEEcC-CCeEEEEcCCCCcce-ee-cccccCCcccccCcccccccc
Confidence 654321000 01111112234679999999996444445 999999998832110 01 1100 1 11223443 333
Q ss_pred CCCCE-EEEEeCCCcEEEEecCC
Q psy4510 376 RTEPL-IVSGGDDGCIHVWDLRR 397 (812)
Q Consensus 376 ~~~~~-l~sg~~dg~i~iwd~~~ 397 (812)
.+|+. +++....+.+.+.+...
T Consensus 243 ~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 243 VGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp ETTEEEEEEEETTEEEEEECSST
T ss_pred cCCEEEEEEcCCCCEEEEECCCC
Confidence 46665 56666667666666654
No 306
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.97 E-value=0.27 Score=49.81 Aligned_cols=253 Identities=11% Similarity=0.072 Sum_probs=129.0
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCccccc-c-cccCCCCCCeeeeeEcCC---CCcEEEe---eCCCce
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-Q-KPLGGHTNSAEDLQWSDL---KTALQTV---DDPFQL 247 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~-~-~~l~~h~~~V~~l~~s~~---~~~l~s~---~~d~~i 247 (812)
....+.|+|.| +|+++++--..|.|++++...+...... . ............|+|+|+ +.+|... ..++.|
T Consensus 31 L~~P~~ia~~p-dG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v 109 (347)
T 3das_A 31 LNSPWGLAPLP-GGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRI 109 (347)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEE
T ss_pred CCCceEEEEcC-CCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEE
Confidence 45678999999 9998888876899999986554321110 1 122334567889999996 3444432 234455
Q ss_pred EEeeCCCCCC--CCC-CCCCce-EEc-CCCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc--
Q psy4510 248 AEHNKKRGKG--PGI-PTPPLF-SFS-GHLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA-- 307 (812)
Q Consensus 248 ~vwd~~~~~~--~~~-~~~~~~-~~~-~h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~-- 307 (812)
.-|.+..+.. ... ..+.+. .+. +.......|.|.|++ .+.++.+. .|.|.-.+....-.
T Consensus 110 ~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG-~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~ 188 (347)
T 3das_A 110 VRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDK-MLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPG 188 (347)
T ss_dssp EEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTS-CEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTT
T ss_pred EEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCC-CEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCC
Confidence 5565554210 000 111111 121 111234579999998 55555331 34444444432200
Q ss_pred -ce-eccccccCCCCCEEEEEEcCCCCeEEEEE-ECCCeEEEEECCCCCc---------------ccceeecCCcCCCCe
Q psy4510 308 -WQ-VDQKPLVGHTNSVEDLQWSPGEKRVLASC-SVDLSIRIWDTRVINT---------------KSCMLTLPNAHTSDV 369 (812)
Q Consensus 308 -~~-~~~~~~~~h~~~v~~~~~~p~~~~~l~s~-~~dg~i~iwd~~~~~~---------------~~~~~~~~~~~~~~v 369 (812)
.. .....-.+|. ....++|+|++. ++++- +.|+.=.|--+..+.. ..++..+ ..+....
T Consensus 189 nPf~~~~i~a~G~R-Np~Gla~dp~G~-L~~~d~g~~~~deln~i~~G~nyGwP~~~g~~~~~~~~~P~~~~-~~~~~ap 265 (347)
T 3das_A 189 NPFPGSPVYSYGHR-NVQGLAWDDKQR-LFASEFGQDTWDELNAIKPGDNYGWPEAEGKGGGSGFHDPVAQW-STDEASP 265 (347)
T ss_dssp CSSTTCCEEEBCCS-BCCEEEECTTCC-EEEEECCSSSCEEEEEECTTCBCCTTTCCSSCCCTTCCCCSEEE-CTTTCCE
T ss_pred CCCCCCeEEeeCCC-CcceEEECCCCC-EEEEecCCCCCceeeEEcCCCEecCCcccCCCCCccccCCcEec-CCCCCCC
Confidence 00 0001112343 456899999876 44432 2333223332222111 1112222 1122355
Q ss_pred EEEEEcCCCCEEEEEeCCCcEEEEecCCCCC-CCceEEcccCCCCEEEEEEccCCCcEEEEEECCC
Q psy4510 370 NVISWNRTEPLIVSGGDDGCIHVWDLRRFKK-GSSVATFKHHTAPVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 370 ~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~-~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg 434 (812)
..|+|. .+.+++..-..+.|....+..... ......+.+..+.+..|+..|+|..++++...||
T Consensus 266 ~G~~~~-~g~~~~~~l~~~~l~~v~~~~~~~~~~~e~~l~~~~gR~~dv~~~pDG~lyv~td~~~g 330 (347)
T 3das_A 266 SGIAYA-EGSVWMAGLRGERLWRIPLKGTAAAADPQAFLEGEYGRLRTVAPAGGDKLWLVTSNTDG 330 (347)
T ss_dssp EEEEEE-TTEEEEEESTTCSEEEEEEETTEESSCCEEESTTTSSCEEEEEEEETTEEEEEECTTSS
T ss_pred cceEEE-cCceeeccccCCEEEEEEecCCceecceEEeecCCCCCccEEEECCCCcEEEEEcCCCC
Confidence 677776 355666666667777777653211 1223344444578999999999853333333344
No 307
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.92 E-value=0.17 Score=52.02 Aligned_cols=242 Identities=10% Similarity=-0.010 Sum_probs=121.9
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCC---CCcEEEeeC----C----C
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDL---KTALQTVDD----P----F 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~---~~~l~s~~~----d----~ 245 (812)
...+.++|.| +|+++++-. +|.|++++.. +...................|+|+|+ +..|..+.. + .
T Consensus 29 ~~P~~ia~~p-dG~l~V~e~-~g~I~~~d~~-G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 29 EVPWSIAPLG-GGRYLVTER-PGRLVLISPS-GKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp SCEEEEEEEE-TTEEEEEET-TTEEEEECSS-CEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCeEEEEcC-CCeEEEEeC-CCEEEEEeCC-CceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 4578899999 998666654 5899999733 22111001111223356889999998 555554433 2 5
Q ss_pred ceEEeeCCCCCCCCCCCCCceE-EcC-CCCcEEEEEecCCCCCEEEEEeC-------------CCcEEEEeCCCCCc---
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFS-FSG-HLTEGFAMDWSSTEPGVLATGDC-------------KRNIHIWTPREAGA--- 307 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~sg~~-------------dg~i~vwd~~~~~~--- 307 (812)
.|..++...........+.+.. +.. .......|+|.|++ .+.++-+. .|.|.-.+....-.
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG-~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~n 184 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDG-MLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADN 184 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTS-CEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTS
T ss_pred EEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCC-cEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCC
Confidence 5666766542000000011111 221 11124579999998 55555332 24455555432100
Q ss_pred ce-eccccccCCCCCEEEEEEcC-CCCeEEEEEECCC---eEEEEECCCCCc---------------ccceeecCCcCCC
Q psy4510 308 WQ-VDQKPLVGHTNSVEDLQWSP-GEKRVLASCSVDL---SIRIWDTRVINT---------------KSCMLTLPNAHTS 367 (812)
Q Consensus 308 ~~-~~~~~~~~h~~~v~~~~~~p-~~~~~l~s~~~dg---~i~iwd~~~~~~---------------~~~~~~~~~~~~~ 367 (812)
.. .......++ .....++|+| ++. ++++-.... .|.+.. .+.. ..++..+. ....
T Consensus 185 pf~~~~i~a~G~-rnp~Gla~d~~~g~-l~v~d~g~~~~dei~~i~--~G~nyGwp~~~g~~~~~~~~~p~~~~~-~~~~ 259 (354)
T 3a9g_A 185 PFPNSPIWSYGH-RNPQGIDWHRASGV-MVATEHGPVGHDEVNIIL--KGGNYGWPLATGKAGRGEFVDPVIDTG-SETW 259 (354)
T ss_dssp SSTTCCEEEECC-SCCCEEEECTTTCC-EEEEECCSSSCCEEEEEC--TTCBCCTTTCCSCCCCTTSCCCSEECT-TCCC
T ss_pred CCCCCcEEEEcc-CCcceEEEeCCCCC-EEEEecCCCCCcEEEEec--CCCcCCCCcccCCCCCCCCcCCEeecC-CCCc
Confidence 00 000111223 2356899999 555 555433222 233322 1110 01122221 1234
Q ss_pred CeEEEEEc-------CCCCEEEEEeCCCcEEEEecCCCCCCCce--EEc-ccCCCCEEEEEEccCCCcEEEEE
Q psy4510 368 DVNVISWN-------RTEPLIVSGGDDGCIHVWDLRRFKKGSSV--ATF-KHHTAPVTTVEWHPTESSTFASG 430 (812)
Q Consensus 368 ~v~~l~~~-------~~~~~l~sg~~dg~i~iwd~~~~~~~~~~--~~~-~~h~~~v~~v~~~p~~~~~l~s~ 430 (812)
....++|. .+|.++++....+.|...++.. .+... ..+ ......+..+++.|++. ++++.
T Consensus 260 ap~G~~~y~g~~fp~~~G~l~v~~~~~~~v~~~~~~~--~g~~~~~~~~~~~~~~rp~~v~~~pDG~-lyv~~ 329 (354)
T 3a9g_A 260 APSGASFVHGDMFPGLRGWLLIACLRGSMLAAVNFGD--NMEVRKISTFFKNVFGRLRDVVIDDDGG-ILIST 329 (354)
T ss_dssp CEEEEEECCSSSCGGGTTEEEEEETTTTEEEEEEECG--GGCEEEEEEECTTTSCCEEEEEECTTSC-EEEEE
T ss_pred CCcceEEECCCCCcccCCcEEEEEcCCCEEEEEEECC--CCcccceeeeccCCCCCeeEEEECCCCc-EEEEE
Confidence 57788884 4566777766777888888863 11221 222 22245789999999874 54444
No 308
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.90 E-value=0.028 Score=55.97 Aligned_cols=160 Identities=13% Similarity=0.185 Sum_probs=101.9
Q ss_pred CcEEEEEecCCCCCEEEEEe-CCCcEEEEeCCCCCcceeccccccC-----C-CCCEEEEEE---cCCCCeEEEEEE---
Q psy4510 273 TEGFAMDWSSTEPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVG-----H-TNSVEDLQW---SPGEKRVLASCS--- 339 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~-----h-~~~v~~~~~---~p~~~~~l~s~~--- 339 (812)
.--.+++|.+.. ++|..++ ..++|..|+...+....+ .+.+ . ...+..|.| .|+++ ++++..
T Consensus 13 ~yPE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~~~~~~---~~~~~s~~g~~~~~~sGl~~~~~D~~gr-L~vv~~~~~ 87 (334)
T 2p9w_A 13 LTPEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQSHFNV---VIDGASSNGDGEQQMSGLSLLTHDNSKR-LFAVMKNAK 87 (334)
T ss_dssp CCCSCEEEETTT-TEEEEEETTTTEEEEECTTTCCEEEE---CCTTTCCSSCCSEEEEEEEESSSSSCCE-EEEEEEETT
T ss_pred cCCcCccCcCCC-CEEEEEeccCCEEEEEcCCCCeEEEE---ecCCccccCCCcceeeEEEEeccCCCCc-EEEEEcccc
Confidence 334588998876 5555555 789999999975542222 2221 1 114689999 68865 666543
Q ss_pred ----------CCCeEEEEECC---CCCcccceeecC---Cc-------CCCCeEEEEEcCCCCEEEEEeCC-CcEEEEec
Q psy4510 340 ----------VDLSIRIWDTR---VINTKSCMLTLP---NA-------HTSDVNVISWNRTEPLIVSGGDD-GCIHVWDL 395 (812)
Q Consensus 340 ----------~dg~i~iwd~~---~~~~~~~~~~~~---~~-------~~~~v~~l~~~~~~~~l~sg~~d-g~i~iwd~ 395 (812)
.+..|..+|+. ++..... ..+. .+ -....+.++..++|+..++++.. +.|...+.
T Consensus 88 af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~-~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~p 166 (334)
T 2p9w_A 88 SFNFADQSSHGASSFHSFNLPLSENSKPVWS-VNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVSA 166 (334)
T ss_dssp TTCTTSCCSSSCCEEEEEESSCCTTCCCSEE-EESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEECT
T ss_pred cccccccccCCCCEEEEEcCCcCCCCCEEEE-ecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEeC
Confidence 26789999988 4332211 1110 00 11358899999999988888888 88777776
Q ss_pred CCCCCCCceEEcc------cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 396 RRFKKGSSVATFK------HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 396 ~~~~~~~~~~~~~------~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
. ++.+..+. ......+.|+++|++. +|++....|.|..+|+..
T Consensus 167 d----G~~~~~~~~~~~~~~~~~G~nGIv~~pdg~-~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 167 D----GKTVSTFAWESGNGGQRPGYSGITFDPHSN-KLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp T----SCCEEEEEECCCCSSSCCSCSEEEEETTTT-EEEEESSSSSEEEEECSS
T ss_pred C----CCEEeeeeecCCCcccccCcceEEEeCCCC-EEEEEcCCCeEEEEcCCC
Confidence 4 33333221 1122367999999985 555555599999999873
No 309
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.73 E-value=0.34 Score=49.65 Aligned_cols=110 Identities=15% Similarity=0.142 Sum_probs=63.2
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccccCCCCCEEEEEEcCC---CCeEEEEEECC-----C
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVEDLQWSPG---EKRVLASCSVD-----L 342 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~d-----g 342 (812)
-.....|+|.|++ . |+.+...|.|++++ .+....+. ...+.........|+|+|+ +..++++-... +
T Consensus 30 l~~P~~ia~~pdG-~-l~V~e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~ 105 (352)
T 2ism_A 30 LEVPWALAFLPDG-G-MLIAERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRN 105 (352)
T ss_dssp CSCEEEEEECTTS-C-EEEEETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEE
T ss_pred CCCceEEEEcCCC-e-EEEEeCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCcc
Confidence 3456799999998 4 44556679999998 33211110 1112223456899999998 55556655543 6
Q ss_pred eEEEEECCCCC--cccceee-cC--CcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 343 SIRIWDTRVIN--TKSCMLT-LP--NAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 343 ~i~iwd~~~~~--~~~~~~~-~~--~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.|..++..... ....+.. ++ .........|+|.|+|.++++-+
T Consensus 106 ~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 106 QVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECC
T ss_pred EEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEEC
Confidence 77778775321 0111221 32 11112346899999998666543
No 310
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.43 E-value=0.22 Score=50.72 Aligned_cols=200 Identities=14% Similarity=0.065 Sum_probs=111.3
Q ss_pred EEeCCCCCCeEEEec------------CCCcEEEEccCCCCcccccccc----cCCCCCCeeeeeEcC--CCC-cEEEee
Q psy4510 182 MDWSSTEPGVLATGD------------CKRNIHIWTPREAGAWQVDQKP----LGGHTNSAEDLQWSD--LKT-ALQTVD 242 (812)
Q Consensus 182 ~~~sp~~~~~lat~~------------~dg~v~iwd~~~~~~~~~~~~~----l~~h~~~V~~l~~s~--~~~-~l~s~~ 242 (812)
++..| +|..+++++ .+|.|.++|+.+.......+.. +.........+.+.+ +++ +|..+.
T Consensus 55 i~~~~-~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvn 133 (355)
T 3sre_A 55 LEILP-NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVN 133 (355)
T ss_dssp EEECT-TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEE
T ss_pred eEEcC-CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEE
Confidence 44567 665555542 6899999998753221111111 111234555666644 343 455553
Q ss_pred C---CCceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeC-----------------CCcEEEEe
Q psy4510 243 D---PFQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDC-----------------KRNIHIWT 301 (812)
Q Consensus 243 ~---d~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~-----------------dg~i~vwd 301 (812)
. ...+.+|++..... ....+.++.+.. ...+.+.+.++| .+.++... .|.|..++
T Consensus 134 h~~~~s~ielf~~d~~~~---~~~~~~~~~g~~~~~pND~~v~~~G-~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d 209 (355)
T 3sre_A 134 HPGSSSTVEVFKFQEEEK---SLLHLKTIRHKLLPSVNDIVAVGPE-HFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYS 209 (355)
T ss_dssp CSTTCCEEEEEEEETTTT---EEEEEEEECCTTCSSEEEEEEEETT-EEEEEESCSCSSHHHHHHHHHTTCCCEEEEEEC
T ss_pred CCCCCCeEEEEEEECCCC---EEEEEeccccCCCCCCceEEEeCCC-CEEecCCcEeCCcccccchhhccCCccEEEEEE
Confidence 2 45677887765310 112233344322 357899999987 56666541 23454454
Q ss_pred CCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcC-CCCE
Q psy4510 302 PREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNR-TEPL 380 (812)
Q Consensus 302 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~~ 380 (812)
. +. ...+...-...+.++|+|+++.++++-+..+.|..|++...........+ ........++..+ +|++
T Consensus 210 ~--~~-----~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~--~~~g~PDGi~vD~e~G~l 280 (355)
T 3sre_A 210 P--ND-----VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL--SFDTLVDNISVDPVTGDL 280 (355)
T ss_dssp T--TC-----CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE--ECSSEEEEEEECTTTCCE
T ss_pred C--Ce-----EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE--eCCCCCceEEEeCCCCcE
Confidence 4 22 11222223457899999999987777778899999998742222112222 1245567888998 5887
Q ss_pred EEEEeCC-CcEEEEec
Q psy4510 381 IVSGGDD-GCIHVWDL 395 (812)
Q Consensus 381 l~sg~~d-g~i~iwd~ 395 (812)
.+++..+ +.|..|+.
T Consensus 281 wva~~~~g~~v~~~~P 296 (355)
T 3sre_A 281 WVGCHPNGMRIFFYDA 296 (355)
T ss_dssp EEEEESCHHHHHSCCT
T ss_pred EEEecCCceEEEEECC
Confidence 7766533 34444444
No 311
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.41 E-value=0.98 Score=46.22 Aligned_cols=110 Identities=11% Similarity=0.045 Sum_probs=62.5
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cccccCCCCCEEEEEEcCC---CCeEEEEEEC---C---
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QKPLVGHTNSVEDLQWSPG---EKRVLASCSV---D--- 341 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~~~~~h~~~v~~~~~~p~---~~~~l~s~~~---d--- 341 (812)
-....+|+|.|++ . |+.+..+|.|++++. .+. ..+. .............|+++|+ +..++++-+. +
T Consensus 28 l~~P~~ia~~pdG-~-l~V~e~~g~I~~~d~-~G~-~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~ 103 (354)
T 3a9g_A 28 LEVPWSIAPLGGG-R-YLVTERPGRLVLISP-SGK-KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHI 103 (354)
T ss_dssp CSCEEEEEEEETT-E-EEEEETTTEEEEECS-SCE-EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCE
T ss_pred CCCCeEEEEcCCC-e-EEEEeCCCEEEEEeC-CCc-eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCc
Confidence 3456799999997 4 555666799999973 222 1111 0111222356899999998 5545555543 3
Q ss_pred -CeEEEEECCCCC----cccceee-cCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 342 -LSIRIWDTRVIN----TKSCMLT-LPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 342 -g~i~iwd~~~~~----~~~~~~~-~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
..|..|+..... ....+.. ++.........|+|.|+|.++++-+
T Consensus 104 ~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 104 RNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSCEEEECC
T ss_pred ceEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCcEEEEEC
Confidence 567777765321 0111111 2211122346799999998666643
No 312
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.18 E-value=0.5 Score=48.06 Aligned_cols=176 Identities=10% Similarity=0.026 Sum_probs=96.9
Q ss_pred CCCceEEeeCCCCCCCCCCCCCceEEcC-----CCCcEEEEEecC--CCCCEEEEEe-C--CCcEEEEeCCCCCcceecc
Q psy4510 243 DPFQLAEHNKKRGKGPGIPTPPLFSFSG-----HLTEGFAMDWSS--TEPGVLATGD-C--KRNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 243 ~d~~i~vwd~~~~~~~~~~~~~~~~~~~-----h~~~v~~l~~sp--~~~~~l~sg~-~--dg~i~vwd~~~~~~~~~~~ 312 (812)
.+|.|.++|.++... ..+. ..+.+ ..-....+.+.+ ++..+|+.+. . +.+|.+|++..........
T Consensus 81 ~~G~I~~~d~~~~~~---~~~~-l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~ 156 (355)
T 3sre_A 81 KSGKILLMDLNEKEP---AVSE-LEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHL 156 (355)
T ss_dssp -CCEEEEEETTSSSC---CEEE-CEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEE
T ss_pred CCCeEEEEecCCCCC---ceEE-EEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEE
Confidence 688899999875310 1111 12332 223566777766 3433455553 2 4678898887654433333
Q ss_pred ccccCC-CCCEEEEEEcCCCCeEEEEEE-----------------CCCeEEEEECCCCCcccceeecCCcCCCCeEEEEE
Q psy4510 313 KPLVGH-TNSVEDLQWSPGEKRVLASCS-----------------VDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISW 374 (812)
Q Consensus 313 ~~~~~h-~~~v~~~~~~p~~~~~l~s~~-----------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~ 374 (812)
..+.+. -...+++.+.++|. +.++.. ..|.|..+|.. . +..+ ...-..-+.++|
T Consensus 157 ~~~~g~~~~~pND~~v~~~G~-fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~---~---~~~~-~~~l~~pNGia~ 228 (355)
T 3sre_A 157 KTIRHKLLPSVNDIVAVGPEH-FYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPN---D---VRVV-AEGFDFANGINI 228 (355)
T ss_dssp EEECCTTCSSEEEEEEEETTE-EEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTT---C---CEEE-EEEESSEEEEEE
T ss_pred eccccCCCCCCceEEEeCCCC-EEecCCcEeCCcccccchhhccCCccEEEEEECC---e---EEEe-ecCCcccCcceE
Confidence 444432 24689999999997 455543 12445555542 1 1111 122345799999
Q ss_pred cCCCCEEEEE-eCCCcEEEEecCCCCCCCceEEcccCCCCEEEEEEcc-CCCcEEEEEEC
Q psy4510 375 NRTEPLIVSG-GDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHP-TESSTFASGGA 432 (812)
Q Consensus 375 ~~~~~~l~sg-~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p-~~~~~l~s~~~ 432 (812)
+|+++.|+.+ +..+.|..|++...........+ ...+..-.+++.+ +| ++.+++..
T Consensus 229 spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~-~~~g~PDGi~vD~e~G-~lwva~~~ 286 (355)
T 3sre_A 229 SPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVL-SFDTLVDNISVDPVTG-DLWVGCHP 286 (355)
T ss_dssp CTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEE-ECSSEEEEEEECTTTC-CEEEEEES
T ss_pred CCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEE-eCCCCCceEEEeCCCC-cEEEEecC
Confidence 9999865554 45789999998631111111223 2234556677777 35 45554443
No 313
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=96.10 E-value=1.5 Score=44.83 Aligned_cols=248 Identities=8% Similarity=0.030 Sum_probs=123.2
Q ss_pred CeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceE----EcCCCCcEEEEEecCC---CCCEEEEEeC----
Q psy4510 225 SAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFS----FSGHLTEGFAMDWSST---EPGVLATGDC---- 293 (812)
Q Consensus 225 ~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~----~~~h~~~v~~l~~sp~---~~~~l~sg~~---- 293 (812)
.-..|+|.|+|+.|..+...+.|++++..... ..++.. +.........|+|+|+ +..+.++-..
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~g~~-----~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAGKGL-----SAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETTTEE-----CCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCCCce-----eeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 45789999999845556677899988753310 011111 1122346789999996 4234444322
Q ss_pred ---CCcEEEEeCCCCCc----ceeccccc-----cCCCCCEEEEEEcCCCCeEEEEEEC-------------CCeEEEEE
Q psy4510 294 ---KRNIHIWTPREAGA----WQVDQKPL-----VGHTNSVEDLQWSPGEKRVLASCSV-------------DLSIRIWD 348 (812)
Q Consensus 294 ---dg~i~vwd~~~~~~----~~~~~~~~-----~~h~~~v~~~~~~p~~~~~l~s~~~-------------dg~i~iwd 348 (812)
...|..|++..... ..+....+ ..|. ...|+|.|+|. ++++.+. .|.|.-++
T Consensus 94 g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~--~~~l~~~pdG~-Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~ 170 (353)
T 2g8s_A 94 GKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHF--GGRLVFDGKGY-LFIALGENNQRPTAQDLDKLQGKLVRLT 170 (353)
T ss_dssp SCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCC--CCCEEECSSSE-EEEEECCTTCGGGGGCTTSCTTEEEEEE
T ss_pred CCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCccc--CccEEECCCCc-EEEEECCCCCCCccCCCCCCCeEEEEEC
Confidence 23566666654321 11111111 1232 36799999995 5555433 24666666
Q ss_pred CCCCCc-----------ccceeecCCcCCCCeEEEEEcC-CCCEEEEEe-CCCcEEEEecCCC-----------------
Q psy4510 349 TRVINT-----------KSCMLTLPNAHTSDVNVISWNR-TEPLIVSGG-DDGCIHVWDLRRF----------------- 398 (812)
Q Consensus 349 ~~~~~~-----------~~~~~~~~~~~~~~v~~l~~~~-~~~~l~sg~-~dg~i~iwd~~~~----------------- 398 (812)
....-. ...+.. .++ .....++|+| .+.++++-. .++.=.|.-+...
T Consensus 171 ~dG~~p~~npf~~~~~~~~~i~a--~G~-rnp~gl~~d~~~g~l~~~d~g~~~~dei~~i~~G~nyGwp~~~~~~~~~~~ 247 (353)
T 2g8s_A 171 DQGEIPDDNPFIKESGVRAEIWS--YGI-RNPQGMAMNPWSNALWLNEHGPRGGDEINIPQKGKNYGWPLATWGINYSGF 247 (353)
T ss_dssp TTSCCCTTCTTTTSTTSCTTEEE--ECC-SEEEEEEEETTTTEEEEEEECSBSCEEEECCCTTCBCCTTTBCSSBCTTSS
T ss_pred CCCCCCCCCCCcCCCCCCccEEE--EcC-cCccceEEECCCCCEEEEecCCCCCcEEeEeccCCcCCCCCccCCCCCCCC
Confidence 652100 111111 233 2367899999 565444322 1211122211100
Q ss_pred -----------CCCCceEEcccCCCCEEEEEEccC------CCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCC
Q psy4510 399 -----------KKGSSVATFKHHTAPVTTVEWHPT------ESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPS 461 (812)
Q Consensus 399 -----------~~~~~~~~~~~h~~~v~~v~~~p~------~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 461 (812)
....++..+..| .....+.|... ...++++.-..+.|...++...+.. .
T Consensus 248 ~~~~~~~~~~~~~~~P~~~~~~~-~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~-------------~ 313 (353)
T 2g8s_A 248 KIPEAKGEIVAGTEQPVFYWKDS-PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVT-------------E 313 (353)
T ss_dssp CCTTCCBSSCTTSCCCSEEESSC-CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEE-------------E
T ss_pred ccCcccCCCCCCccCCeEEeCCC-cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEe-------------e
Confidence 001223333333 45678888642 1246666556677777777633110 0
Q ss_pred ceEEeecCCCceeEEEEcCCCCCEEEEEeCCCeEEEE
Q psy4510 462 QLLFIHLGQKEIKELHWHPQLPGTIISTANSGFNIFR 498 (812)
Q Consensus 462 ~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~ 498 (812)
...+.......+..+++.|++. +++++....-.+|+
T Consensus 314 ~~~~~~~~~~rp~~v~~~pdG~-lyv~td~~~g~I~r 349 (353)
T 2g8s_A 314 DGRILTDRGQRIRDVRTGPDGY-LYVLTDESSGELLK 349 (353)
T ss_dssp EEEESGGGCCCEEEEEECTTSC-EEEEECSTTEEEEE
T ss_pred eEEcccCCCCceeEEEECCCCc-EEEEEeCCCCEEEE
Confidence 1111112234789999999975 44444333334443
No 314
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.02 E-value=0.5 Score=48.57 Aligned_cols=115 Identities=14% Similarity=0.159 Sum_probs=70.6
Q ss_pred cEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCccee--------ccccc-----c-CCCCCEEEEEEcCCCCe--EEEE
Q psy4510 274 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQV--------DQKPL-----V-GHTNSVEDLQWSPGEKR--VLAS 337 (812)
Q Consensus 274 ~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~--------~~~~~-----~-~h~~~v~~~~~~p~~~~--~l~s 337 (812)
.+..+..||+| .+||..+. ..|.|-.+..+..... ..+.+ . ....+|..+.|+|-+.. .|++
T Consensus 67 ~i~qlvlSpsG-~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 67 DTFHVISSTSG-DLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TTCEEEECTTS-SEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred ceeEEEECCCC-CEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 56779999999 77777764 6899998874321000 00111 1 13568999999997643 6888
Q ss_pred EECCCeEEEEECCCCCcccceeecC--------CcCCCCeEEEEEcCCCCEEEE--EeCCCcEEE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLP--------NAHTSDVNVISWNRTEPLIVS--GGDDGCIHV 392 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~--------~~~~~~v~~l~~~~~~~~l~s--g~~dg~i~i 392 (812)
-..|+.||+||+..... .+. .+. ......|.+++|.+++-.|+. .+..|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~-~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQE-KPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTS-CCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCC-CCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999985221 111 111 122356788888875432322 334454443
No 315
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=95.95 E-value=3.2 Score=47.35 Aligned_cols=112 Identities=10% Similarity=0.061 Sum_probs=58.1
Q ss_pred CCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC----CCCcEEEEEecCCCCCEEEEEeCC----
Q psy4510 224 NSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG----HLTEGFAMDWSSTEPGVLATGDCK---- 294 (812)
Q Consensus 224 ~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~sg~~d---- 294 (812)
+.|.+|+++|.. ..+.++...+.|..++-... ..+++....+ ....|.+|++.|..+..++.+...
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~D~G~-----tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~ 97 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWDPSTE-----TWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTND 97 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEETTTT-----EEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSS
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeCCCCC-----CEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccc
Confidence 389999999874 45555655565555442221 1111111001 124589999999655555544321
Q ss_pred ---CcEEEEeCCC-CCcceeccccccC--C---CCCEEEEEEcCCCCeEEEEEEC
Q psy4510 295 ---RNIHIWTPRE-AGAWQVDQKPLVG--H---TNSVEDLQWSPGEKRVLASCSV 340 (812)
Q Consensus 295 ---g~i~vwd~~~-~~~~~~~~~~~~~--h---~~~v~~~~~~p~~~~~l~s~~~ 340 (812)
+...||.-.. +..|......+.. + ...+..|+++|.....+..+..
T Consensus 98 ~~~~~~~l~~S~DgG~TW~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~ 152 (737)
T 2cn3_A 98 WLPNMGAILRSTDRGETWEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTR 152 (737)
T ss_dssp SSCCCCEEEEESSSSSSCEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECS
T ss_pred cccCCccEEEeCCCCCCcccCCCCcccCCCcCcccccceEEECCCCCCEEEEeec
Confidence 1245565444 4445543322211 0 1235679999876555665553
No 316
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=95.71 E-value=0.6 Score=55.57 Aligned_cols=233 Identities=14% Similarity=0.188 Sum_probs=132.8
Q ss_pred eCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCC--CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCC
Q psy4510 184 WSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHT--NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIP 261 (812)
Q Consensus 184 ~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~--~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~ 261 (812)
.+| ..++||.-. ..++.|||+++..+ +..|. .+|.-=.|-.... |+-. .+..|.-|++...
T Consensus 73 MnP-~~~iiALra-g~~lQiFnl~~k~k-------lks~~~~e~VvfWkWis~~~-l~lV-T~~aVyHW~~~~~------ 135 (1630)
T 1xi4_A 73 MNP-ASKVIALKA-GKTLQIFNIEMKSK-------MKAHTMTDDVTFWKWISLNT-VALV-TDNAVYHWSMEGE------ 135 (1630)
T ss_pred cCC-CcceEEEec-CCeEEEeehHHhhh-------hcccccCCCceEEEecCCCe-eEEE-cCCeEEEeccCCC------
Confidence 445 555555544 46899999987652 33332 3455555544443 2222 3567999999753
Q ss_pred CCCceEEcCC----CCcEEEEEecCCCCCEEEEEe------CCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc--C
Q psy4510 262 TPPLFSFSGH----LTEGFAMDWSSTEPGVLATGD------CKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS--P 329 (812)
Q Consensus 262 ~~~~~~~~~h----~~~v~~l~~sp~~~~~l~sg~------~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~--p 329 (812)
..|...|..| ...|..-.-+++.+-++++|- -.|.+.+|.++.+. .+.+.||.+....+... +
T Consensus 136 s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~-----sQ~iegha~~F~~~~~~~~~ 210 (1630)
T 1xi4_A 136 SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-----SQPIEGHAASFAQFKMEGNA 210 (1630)
T ss_pred CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeeccccc-----chhhhHhHhhhheeccCCCC
Confidence 3666666665 456777788888855555553 35889999988764 66777887765555442 2
Q ss_pred CCCeEEEEEEC---CCeEEEEECCCCCccccee-------ecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 330 GEKRVLASCSV---DLSIRIWDTRVINTKSCML-------TLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 330 ~~~~~l~s~~~---dg~i~iwd~~~~~~~~~~~-------~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
....+|+.+.. .+.++|-++.....+.... .++ .....--.++..++.-.++..-+.-|.|+++|+.
T Consensus 211 ~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~-- 288 (1630)
T 1xi4_A 211 EESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLE-- 288 (1630)
T ss_pred CCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecc--
Confidence 22334444333 2789999986431111111 111 1112234456777776788888899999999998
Q ss_pred CCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcC
Q psy4510 399 KKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLA 442 (812)
Q Consensus 399 ~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~ 442 (812)
++..+..-+-...+|...+-+..... ++.....|.|.--.+.
T Consensus 289 -t~~~i~~~ris~~~iF~~~~~~~~~g-~~~vnr~G~vl~v~v~ 330 (1630)
T 1xi4_A 289 -TGTCIYMNRISGETIFVTAPHEATAG-IIGVNRKGQVLSVCVE 330 (1630)
T ss_pred -cchhhhhccccCCceEEeccCCCCCc-eEEEcCCceEEEEEEc
Confidence 45555444433444444333322212 2333345555444433
No 317
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=95.58 E-value=4.5 Score=46.36 Aligned_cols=489 Identities=11% Similarity=0.022 Sum_probs=233.4
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
.+.|.++.-.. +|. |-.|+.+| +..||-..-.. ....-......|.++....++. |-.++.+| +..||..+.
T Consensus 21 ~n~V~~I~qD~-~G~-lWigT~~G-L~ryDG~~~~~---~~~~~~~~~~~i~~i~~d~~g~-lWigT~~G-l~~yd~~~~ 92 (758)
T 3ott_A 21 ASVVSCFLQDS-EGL-IWIGSNKG-LFSYDGYSTQQ---HFTYGENNNTRIYCGVIIDNTY-LYMGTDNG-ILVYNYRAD 92 (758)
T ss_dssp CCCEEEEEECT-TSC-EEEEESSC-EEEECSSCEEE---CSCTTSTTSSCEEEEEEETTTE-EEEEETTE-EEEEETTTT
T ss_pred cceEEEEEECC-CCC-EEEEECCC-ccccCCCceEE---EEccCCCCCceEEEEEEcCCCc-EEEEeCCC-eEEEeCCCC
Confidence 46799998766 554 44455566 56676322110 0000112245688888777664 44555544 778887764
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEE
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVL 335 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l 335 (812)
. .... .......|.++.. .+ +.|..|+.+ -|..++..+............-....|.++....++. +.
T Consensus 93 ~-----f~~~--~~~~~~~i~~i~~-~~--g~lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~-lW 160 (758)
T 3ott_A 93 R-----YEQP--ETDFPTDVRTMAL-QG--DTLWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQ-IY 160 (758)
T ss_dssp E-----ECCC--SCCCCSCEEEEEE-ET--TEEEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCC-EE
T ss_pred E-----EECc--ccCCCceEEEEEe-cC--CcEEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCC-EE
Confidence 1 1110 0111235666654 33 455566655 5888888765421110000011234688888888887 33
Q ss_pred EEEECCCeEEEEECCCCCcccceeecCCc---CCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcc-cCC
Q psy4510 336 ASCSVDLSIRIWDTRVINTKSCMLTLPNA---HTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFK-HHT 411 (812)
Q Consensus 336 ~s~~~dg~i~iwd~~~~~~~~~~~~~~~~---~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~-~h~ 411 (812)
.++.. -|..++....... ....... ....|.++...+++..|..|+. +-|..+|... . .+..+. ...
T Consensus 161 -igt~~-Gl~~~~~~~~~~~--~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~---~-~~~~~~~l~~ 231 (758)
T 3ott_A 161 -VGTYN-GLCRYIPSNGKFE--GIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPST---G-QIKQTEAFHN 231 (758)
T ss_dssp -EEETT-EEEEEETTTTEEE--EECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTT---T-EEEEEEEEEE
T ss_pred -EEeCC-CHhhCccCCCceE--EecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCC---C-eEEeccCCCC
Confidence 35544 5777887632111 1111110 1234888888877775555654 4588888753 2 222221 113
Q ss_pred CCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCceeEEEEcCCCCCEEEEEeC
Q psy4510 412 APVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIKELHWHPQLPGTIISTAN 491 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~~~~~~~ 491 (812)
..|.++....++. |..|+.+ -+.+++........ ....+.. ........|.++....++ .+.+++ .
T Consensus 232 ~~i~~i~~d~~g~--lWigT~~-Gl~~~~~~~~~~~~-------~~~~~~~--~~~l~~~~i~~i~~D~~g-~lWiGT-~ 297 (758)
T 3ott_A 232 NSIKSLALDGNGD--LLAGTDN-GLYVYHNDTTPLQH-------IIHDSRN--IQSLTNNIIWNIFADQEH-NIWLGT-D 297 (758)
T ss_dssp EEEEEEEECTTCC--EEEEETT-EEEEECCTTSCCEE-------ECCCTTC--TTSCSCSCEEEEEECTTC-CEEEEE-S
T ss_pred CeEEEEEEcCCCC--EEEEeCC-ceeEEecCCCcEEE-------EEcCCCC--cCcCCcCeEEEEEEcCCC-CEEEEe-C
Confidence 3578887777653 4555554 47888876542100 0000000 000112357888777765 344544 4
Q ss_pred CCeEEEEeCCCCCcccEEe-----ecCCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCcccccccccccccccCC
Q psy4510 492 SGFNIFRTISDLPSQLLFI-----HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTSTEEDNERELEDDESE 566 (812)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~-----~~~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 566 (812)
.|+.++.. . ........ ......|.++....+ +.+-.....+. +. +.... .... ........
T Consensus 298 ~Gl~~~~~-~-~~~~~~~~~~~~~~~~~~~v~~i~~D~~--g~lWiGt~~Gl--~~-~~~~~---~~~~-~~~~~~~~-- 364 (758)
T 3ott_A 298 YGISLSRY-N-SALQFIPISQITGTGDGNQFYSLFRDSK--GFYWFGGANGL--IR-FTDPA---GERH-DAIWYRMG-- 364 (758)
T ss_dssp SSEEEECC-C-C-CEEEEHHHHSCSCCCCBEEEEEECTT--CCEEEEETTEE--EE-ESCTT---SSCC-CCEEECTT--
T ss_pred Cccccccc-C-CceeEEecccCCCCCCCceEEEEEEcCC--CCEEEeeCCcc--ee-ecccc---cccc-eeEEeccC--
Confidence 46544321 1 11111110 011235777766655 33333333321 11 11000 0000 00000000
Q ss_pred CCCCccccCCCccceEEecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCC
Q psy4510 567 GSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPT 646 (812)
Q Consensus 567 ~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 646 (812)
.. .. .-....|.++.-..+|...+ | + ++-|..|+..++.-.
T Consensus 365 ---------~~--~~--~l~~~~v~~i~~d~~g~lWi-g--t-~~GL~~~~~~~~~~~---------------------- 405 (758)
T 3ott_A 365 ---------DK--TY--PLSHNRIRHIYEDKEQQLWI-A--T-DGSINRYDYATRQFI---------------------- 405 (758)
T ss_dssp ---------CS--SS--CCSCSCEEEEEECTTSCEEE-E--E-TTEEEEEETTTTEEE----------------------
T ss_pred ---------Cc--CC--CCCCCceEEEEECCCCCEEE-E--e-CCcHhhcCcCCCcEE----------------------
Confidence 00 00 00123578888777776544 4 3 356888888765311
Q ss_pred CCeeeec----CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCC----------------------CceeEEEEecCC
Q psy4510 647 PPLFSFS----GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE----------------------AGAWSVYLYTNR 700 (812)
Q Consensus 647 ~~~~~~~----gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~----------------------~~~~~~~~~s~d 700 (812)
...... -....|.++...+ ++.+.+ |+..+-|.+++..+ +..+..++...+
T Consensus 406 -~~~~~~~~~~~~~~~v~~i~~d~-~g~lWi-gT~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~ 482 (758)
T 3ott_A 406 -HYNIVDNTGTYNTNWTYYIFEDT-AGQLWI-STCLGGIFVVDKHKLMQSTSGQYIAEQNYSVHNGLSGMFINQIIPDNE 482 (758)
T ss_dssp -EEEEECCC--CBSSSEEEEEECT-TSEEEE-EESSSCEEEEEHHHHHHCCSSEEECSEEECGGGTCSCSCEEEEEECTT
T ss_pred -EeecCCCcCCCCCceEEEEEEcC-CCCEEE-EECCCceEEEccccccccCCcceecccccccccccccceeeeEEEcCC
Confidence 000000 0124678888777 554444 44444455555331 111333455677
Q ss_pred CCEEE-eecCCCeEEEeecCCCCCccccc-ccccCCCcceeEeEEecCCceeEEeeccCCceEEeeecCc
Q psy4510 701 FGVLA-TGDCKRNIHIWTPREAGAWQVDQ-KPLVGHTNSVEDLQWSPGEKRVLASCSVDRSNRIGARRDM 768 (812)
Q Consensus 701 g~~la-sgs~dg~i~iwd~~~~~~~~~~~-~~~~gH~~~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~ 768 (812)
|++.+ .|+. +-|..++..+++- .... ..+. ....|.++....+|. +.+.. ..| +..++.+..
T Consensus 483 g~lWi~~~t~-~Gl~~~d~~~~~~-~~~~~~~~~-~~~~~~~i~~d~~g~-lWigt-~~G-l~~~~~~~~ 546 (758)
T 3ott_A 483 GNVWVLLYNN-KGIDKINPRTREV-TKLFADELT-GEKSPNYLLCDEDGL-LWVGF-HGG-VMRINPKDE 546 (758)
T ss_dssp SCEEEEETTC-SSEEEEETTTTEE-EEECTTTSC-GGGCEEEEEECTTSC-EEEEE-TTE-EEEECC--C
T ss_pred CCEEEEccCC-CCcEEEeCCCCce-EEecCCCcC-CCcccceEEECCCCC-EEEEe-cCc-eEEEecCCC
Confidence 77665 3444 4577888776531 1010 0011 124678888888898 45443 344 677775544
No 318
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.41 E-value=2.2 Score=43.86 Aligned_cols=147 Identities=12% Similarity=0.084 Sum_probs=89.3
Q ss_pred cCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCccc
Q psy4510 281 SSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKS 356 (812)
Q Consensus 281 sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 356 (812)
+.++ ..++.+- ++.||.-++..... .+.+.-. -..|..+..+|+|. +||..+ +..|.|-.+..+....
T Consensus 29 ~~n~-t~i~~a~-~n~iR~~~i~~~~~----Yk~L~~~~~i~f~~i~qlvlSpsG~-lLAl~g-~~~V~Vv~LP~~~~~~ 100 (452)
T 3pbp_A 29 SQNG-TRIVFIQ-DNIIRWYNVLTDSL----YHSLNFSRHLVLDDTFHVISSTSGD-LLCLFN-DNEIFVMEVPWGYSNV 100 (452)
T ss_dssp ETTT-TEEEEEE-TTEEEEEETTTCSS----CEEEECTTTCCCCTTCEEEECTTSS-EEEEEC-SSEEEEEECCTTCSCC
T ss_pred EcCC-CEEEEEE-CCEEEEEECCCCCc----ceEEecCcccccCceeEEEECCCCC-EEEEec-CCeEEEEEecCccccC
Confidence 3444 4555543 37788888875432 2222211 23578899999999 466554 5689998886321111
Q ss_pred ---------ceeecCCc-----CCCCeEEEEEcCCC---CEEEEEeCCCcEEEEecCCCCCCCceEEcc---------cC
Q psy4510 357 ---------CMLTLPNA-----HTSDVNVISWNRTE---PLIVSGGDDGCIHVWDLRRFKKGSSVATFK---------HH 410 (812)
Q Consensus 357 ---------~~~~~~~~-----~~~~v~~l~~~~~~---~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~---------~h 410 (812)
....+.-+ ...+|..+.|+|-+ ..|++-..|+.|++||+... ...+. .+. ..
T Consensus 101 ~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s-~~~P~-~L~k~~~~fg~d~~ 178 (452)
T 3pbp_A 101 EDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNS-QEKPI-VLNKPNNSFGLDAR 178 (452)
T ss_dssp CCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCT-TSCCE-EESCCCSEEESCSS
T ss_pred cccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccC-CCCCc-chhccccccCCCcc
Confidence 11122111 35789999999976 48999999999999999851 12233 222 23
Q ss_pred CCCEEEEEEccCCCcEEEEEE--CCCCEEE
Q psy4510 411 TAPVTTVEWHPTESSTFASGG--ADDQIAL 438 (812)
Q Consensus 411 ~~~v~~v~~~p~~~~~l~s~~--~dg~v~i 438 (812)
...|.+++|.+++ ..|...+ ..|.|.-
T Consensus 179 ~~ev~S~~Fg~~~-lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 179 VNDITDLEFSKDG-LTLYCLNTTEGGDIFA 207 (452)
T ss_dssp CCCEEEEEECTTS-SCEEEEECTTSCEEEE
T ss_pred cceEEEEEEcCCC-cEEEEEecCCCCCEEE
Confidence 3578889998853 5555544 5565543
No 319
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.18 E-value=1.1 Score=44.50 Aligned_cols=235 Identities=11% Similarity=0.100 Sum_probs=109.4
Q ss_pred CCCeEEEec-CC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCCC
Q psy4510 188 EPGVLATGD-CK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRGK 256 (812)
Q Consensus 188 ~~~~lat~~-~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~~ 256 (812)
++.+++.|| .+ ..+.+||+.+.+-.. ...+........++ .-+++.++.|+.+ ..+.+||..+..
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~--~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~ 89 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSF--LPSITRKRRYVASV--SLHDRIYVIGGYDGRSRLSSVECLDYTADE 89 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEE--CCCCSSCCBSCEEE--EETTEEEEECCBCSSCBCCCEEEEETTCCT
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEe--CCCCChhhccccEE--EECCEEEEEcCCCCCccCceEEEEECCCCC
Confidence 455666666 32 368888887654211 11122111111122 2356667777654 358888887752
Q ss_pred CCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 257 GPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 257 ~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
.. ..+.+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+.+ ++
T Consensus 90 ~~--~W~~~~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~ 160 (301)
T 2vpj_A 90 DG--VWYSVAPMNVRRGLAGATTL--GD-MIYVSGGFDGSRRHTSMERYDPNIDQ-WSML-GDMQTAREGAGLVVA--SG 160 (301)
T ss_dssp TC--CCEEECCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCEEEEEETTTTE-EEEE-EECSSCCBSCEEEEE--TT
T ss_pred CC--eeEECCCCCCCccceeEEEE--CC-EEEEEcccCCCcccceEEEEcCCCCe-EEEC-CCCCCCcccceEEEE--CC
Confidence 00 01111111111111112222 34 567777653 358889987653 4332 122211111122222 44
Q ss_pred CeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCC
Q psy4510 332 KRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKG 401 (812)
Q Consensus 332 ~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~ 401 (812)
. +++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.... .
T Consensus 161 ~-iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~-W 234 (301)
T 2vpj_A 161 V-IYCLGGYDGLNILNSVEKYDPHTGH-WTNVTPMATK-RSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDS-W 234 (301)
T ss_dssp E-EEEECCBCSSCBCCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE-E
T ss_pred E-EEEECCCCCCcccceEEEEeCCCCc-EEeCCCCCcc-cccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCc-E
Confidence 4 77777654 458889987532 2222222111 112223333 46677777764 468899987421 1
Q ss_pred CceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 402 SSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 402 ~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
..+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 235 ~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 279 (301)
T 2vpj_A 235 TTVTSMTTPRCYVGATVL--R-GRLYAIAGYDGNSLLSSIECYDPIID 279 (301)
T ss_dssp EEECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBEEEEEEEETTTT
T ss_pred EECCCCCCcccceeEEEE--C-CEEEEEcCcCCCcccccEEEEcCCCC
Confidence 111111111111122222 3 35777777653 4677777654
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.94 E-value=1.3 Score=44.05 Aligned_cols=231 Identities=12% Similarity=0.112 Sum_probs=105.7
Q ss_pred CCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCCCCCC
Q psy4510 189 PGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRGKGPG 259 (812)
Q Consensus 189 ~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~~~~~ 259 (812)
+.+++.||.+ ..+.+||+.+..- .. ...+......-.++. -+++.++.|+.+ ..+.+||..+..
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~-~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~~--- 88 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEERW-HQ-VAELPSRRCRAGMVY--MAGLVFAVGGFNGSLRVRTVDSYDPVKDQ--- 88 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTEE-EE-ECCCSSCCBSCEEEE--ETTEEEEESCBCSSSBCCCEEEEETTTTE---
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCcE-eE-cccCCcccccceEEE--ECCEEEEEeCcCCCccccceEEECCCCCc---
Confidence 4455556543 3577888776542 11 111211111111222 256666777644 347778876641
Q ss_pred CCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC-----cEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeE
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR-----NIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRV 334 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg-----~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~ 334 (812)
...+..+......-.++.+ ++ .+++.|+.++ .+.+||+.+.. |... ..+.........+.+ ++. +
T Consensus 89 --W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~~-i 158 (302)
T 2xn4_A 89 --WTSVANMRDRRSTLGAAVL--NG-LLYAVGGFDGSTGLSSVEAYNIKSNE-WFHV-APMNTRRSSVGVGVV--GGL-L 158 (302)
T ss_dssp --EEEECCCSSCCBSCEEEEE--TT-EEEEEEEECSSCEEEEEEEEETTTTE-EEEE-CCCSSCCBSCEEEEE--TTE-E
T ss_pred --eeeCCCCCccccceEEEEE--CC-EEEEEcCCCCCccCceEEEEeCCCCe-Eeec-CCCCCcccCceEEEE--CCE-E
Confidence 1111111111111112222 33 5777777553 57788887653 4332 122211111122222 343 6
Q ss_pred EEEEECC-------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCC
Q psy4510 335 LASCSVD-------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKGS 402 (812)
Q Consensus 335 l~s~~~d-------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~ 402 (812)
++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.... ..
T Consensus 159 yv~GG~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~-W~ 233 (302)
T 2xn4_A 159 YAVGGYDVASRQCLSTVECYNATTNE-WTYIAEMSTR-RSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA-WR 233 (302)
T ss_dssp EEECCEETTTTEECCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE-EE
T ss_pred EEEeCCCCCCCccccEEEEEeCCCCc-EEECCCCccc-cccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC-Ee
Confidence 7776542 358889987532 2222222111 112223333 46677777764 368899986411 11
Q ss_pred ceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 403 SVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 403 ~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
.+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 234 ~~~~~~~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 234 QVADMNMCRRNAGVCAV--N-GLLYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp EECCCSSCCBSCEEEEE--T-TEEEEECCBCSSSBCCCEEEEETTTT
T ss_pred eCCCCCCccccCeEEEE--C-CEEEEECCcCCCcccccEEEEcCCCC
Confidence 11111111111122222 2 35777777653 4788888765
No 321
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.92 E-value=2 Score=45.48 Aligned_cols=113 Identities=14% Similarity=0.178 Sum_probs=62.7
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec-cc-ccc--CCCCCEEEEEEcCC---CCeEEEEEEC----
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD-QK-PLV--GHTNSVEDLQWSPG---EKRVLASCSV---- 340 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~-~~-~~~--~h~~~v~~~~~~p~---~~~~l~s~~~---- 340 (812)
-...++|+|.|++ .++++--..+.|++++...+....+. .. .+. ........|+|+|+ +..+.++-+.
T Consensus 26 l~~P~~~a~~pdG-~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDN-QIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCC-cEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456799999998 55555443346888876544321111 11 111 12456789999996 5545555543
Q ss_pred --------CCeEEEEECCCCC----ccccee-ecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 341 --------DLSIRIWDTRVIN----TKSCML-TLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 341 --------dg~i~iwd~~~~~----~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
...|.-++..... ....+. .+..........|+|.|+|.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEEC
Confidence 2345555543211 111222 23222234578999999999666544
No 322
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.86 E-value=4.8 Score=42.61 Aligned_cols=112 Identities=8% Similarity=0.032 Sum_probs=61.6
Q ss_pred CCceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccC------CCCCCeeeeeEcCC---CCcEEEeeC---
Q psy4510 176 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLG------GHTNSAEDLQWSDL---KTALQTVDD--- 243 (812)
Q Consensus 176 ~~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~------~h~~~V~~l~~s~~---~~~l~s~~~--- 243 (812)
....+.|+|.| +|+++++-...+.|++++..++... ....+. ........|+|+|+ +..|..+..
T Consensus 26 l~~P~~~a~~p-dG~l~V~e~~gg~I~~~~~~~g~~~--~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 26 LNKPHALLWGP-DNQIWLTERATGKILRVNPESGSVK--TVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CSSEEEEEECT-TSCEEEEETTTCEEEEECTTTCCEE--EEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCceEEEEcC-CCcEEEEEcCCCEEEEEECCCCcEe--EEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 35678999999 9998888765557888876544321 111111 13466789999996 555544432
Q ss_pred ----------CCceEEeeCCCCCCCCCCCCCceE-EcC-CCCcEEEEEecCCCCCEEEEE
Q psy4510 244 ----------PFQLAEHNKKRGKGPGIPTPPLFS-FSG-HLTEGFAMDWSSTEPGVLATG 291 (812)
Q Consensus 244 ----------d~~i~vwd~~~~~~~~~~~~~~~~-~~~-h~~~v~~l~~sp~~~~~l~sg 291 (812)
...|..++...........+.+.. +.. .......|+|.|+| .+.++.
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG-~Lyv~~ 161 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ-KIYYTI 161 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS-CEEEEE
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC-eEEEEE
Confidence 134555554332100000111221 221 12347899999999 454443
No 323
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.77 E-value=0.58 Score=43.30 Aligned_cols=158 Identities=12% Similarity=0.066 Sum_probs=83.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCc--ccccccccC--CCCCCeeeeeEcCCCCcEEEeeCCCceEEeeC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQKPLG--GHTNSAEDLQWSDLKTALQTVDDPFQLAEHNK 252 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~--~~~~~~~l~--~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~ 252 (812)
..+..++|+| +|.+.|+ .+|.++-.+..+... +......+. +-.. -.++.|.++|.+.++ .||.|.-++-
T Consensus 41 ~~~~~laf~P-~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP-GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT-TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC-CccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 4566899999 9998888 567766666543221 100101110 1111 478999999987777 5588877765
Q ss_pred CCCC-CCCCCCCCceEE-cCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC--cceecccccc-CCCCCEEEEEE
Q psy4510 253 KRGK-GPGIPTPPLFSF-SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG--AWQVDQKPLV-GHTNSVEDLQW 327 (812)
Q Consensus 253 ~~~~-~~~~~~~~~~~~-~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~--~~~~~~~~~~-~h~~~v~~~~~ 327 (812)
.+.. ..++. . -..+ .+-=..+..|.+.|+| .+.+.. |+.++-+...+.. .|......+. +.-....-+.|
T Consensus 115 P~~~~~~Wl~-~-a~~vg~~gw~~~~~lff~p~G-~Lyav~--dg~lyr~~~P~~~~~~wl~~~~~~g~~g~~~yr~l~f 189 (236)
T 1tl2_A 115 PQSDTDNWIA-R-ATEVGSGGWSGFKFLFFHPNG-YLYAVH--GQQFYKALPPVSNQDNWLARATKIGQGGWDTFKFLFF 189 (236)
T ss_dssp CCSTTCCHHH-H-SEEEECSSGGGEEEEEECTTS-CEEEEE--TTEEEEECCCSSTTCCHHHHCEEEESSSGGGEEEEEE
T ss_pred CcCCCCceec-c-ccEeccCCCCceEEEEECCCc-eEEEEe--CCcEEecCCCCCCCcccccccceeccCCcceEEEEEE
Confidence 3321 00000 0 0011 1111568999999997 454444 7876544443222 1211111111 22234556779
Q ss_pred cCCCCeEEEEEECCCeEEEEECC
Q psy4510 328 SPGEKRVLASCSVDLSIRIWDTR 350 (812)
Q Consensus 328 ~p~~~~~l~s~~~dg~i~iwd~~ 350 (812)
.+++. ++++. +| ++|-..
T Consensus 190 ~~~G~-l~~v~--~g--~~Y~~~ 207 (236)
T 1tl2_A 190 SSVGT-LFGVQ--GG--KFYEDY 207 (236)
T ss_dssp CTTSC-EEEEE--TT--EEEEES
T ss_pred CCCCc-EEEEe--CC--eEEecC
Confidence 99887 44443 67 444443
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=94.71 E-value=1.2 Score=41.29 Aligned_cols=107 Identities=10% Similarity=0.016 Sum_probs=62.5
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCC--------EEEEEEcCCCCeEEEEEECCCeE
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNS--------VEDLQWSPGEKRVLASCSVDLSI 344 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~--------v~~~~~~p~~~~~l~s~~~dg~i 344 (812)
..+..++|+|++ .+.+. .+|.++-.+..+... ..+.+.... -.++.|.|++. +.++ .||.|
T Consensus 41 ~~~~~laf~P~G-~LYaV--~~G~Ly~~~~~t~~~-----~~W~~s~t~IG~~Gw~~F~a~~fD~~G~-LYav--~dG~i 109 (236)
T 1tl2_A 41 SNFKFLFLSPGG-ELYGV--LNDKIYKGTPPTHDN-----DNWMGRAKKIGNGGWNQFQFLFFDPNGY-LYAV--SKDKL 109 (236)
T ss_dssp TTCSEEEECTTS-CEEEE--ETTEEEEESCCCSTT-----CCHHHHCEEEECSCGGGCSEEEECTTSC-EEEE--ETTEE
T ss_pred ccceeEEECCCc-cEEEE--eCCeEEEECCCCCCc-----ccccccccEecccccccceEEEECCCCC-EEEe--CCCEE
Confidence 366799999976 44444 667766666544321 111111222 37899999997 4444 56999
Q ss_pred EEEECCCCCccccee---ecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEE
Q psy4510 345 RIWDTRVINTKSCML---TLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHV 392 (812)
Q Consensus 345 ~iwd~~~~~~~~~~~---~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~i 392 (812)
.-++..+.....-+. .+-...-..+..|.+.|+|.+.+.. |+.+.-
T Consensus 110 yr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr 158 (236)
T 1tl2_A 110 YKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK 158 (236)
T ss_dssp EEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE
T ss_pred EEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe
Confidence 877753321111111 1101112468999999999877666 776443
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.41 E-value=2.5 Score=42.01 Aligned_cols=230 Identities=9% Similarity=0.050 Sum_probs=107.4
Q ss_pred CeEEEecC--CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC----CceEEeeCCCCCCCCCCCC
Q psy4510 190 GVLATGDC--KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP----FQLAEHNKKRGKGPGIPTP 263 (812)
Q Consensus 190 ~~lat~~~--dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d----~~i~vwd~~~~~~~~~~~~ 263 (812)
.+++.||. ...+.+||..+.+-.. +..+......-.++. -+++.++.|+.+ ..+.+||..+.. ..
T Consensus 13 ~l~~~GG~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~d~~~~~-----W~ 83 (306)
T 3ii7_A 13 YRIALFGGSQPQSCRYFNPKDYSWTD--IRCPFEKRRDAACVF--WDNVVYILGGSQLFPIKRMDCYNVVKDS-----WY 83 (306)
T ss_dssp EEEEEECCSSTTSEEEEETTTTEEEE--CCCCSCCCBSCEEEE--ETTEEEEECCBSSSBCCEEEEEETTTTE-----EE
T ss_pred eEEEEeCCCCCceEEEecCCCCCEec--CCCCCcccceeEEEE--ECCEEEEEeCCCCCCcceEEEEeCCCCe-----EE
Confidence 35555654 3568888887654211 111221111112222 356666777644 557788877641 11
Q ss_pred CceEEcCCCCcEEEEEecCCCCCEEEEEeCC------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 264 PLFSFSGHLTEGFAMDWSSTEPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 264 ~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+.+ ++. +++.
T Consensus 84 ~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~~--~~~-iyv~ 155 (306)
T 3ii7_A 84 SKLGPPTPRDSLAACAA--EG-KIYTSGGSEVGNSALYLFECYDTRTES-WHTK-PSMLTQRCSHGMVEA--NGL-IYVC 155 (306)
T ss_dssp EEECCSSCCBSCEEEEE--TT-EEEEECCBBTTBSCCCCEEEEETTTTE-EEEE-CCCSSCCBSCEEEEE--TTE-EEEE
T ss_pred ECCCCCccccceeEEEE--CC-EEEEECCCCCCCcEeeeEEEEeCCCCc-eEeC-CCCcCCcceeEEEEE--CCE-EEEE
Confidence 11111111111112222 33 577777765 468899988753 4332 112111111122222 344 6666
Q ss_pred EEC---------CCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCCCCCc
Q psy4510 338 CSV---------DLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFKKGSS 403 (812)
Q Consensus 338 ~~~---------dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~~~~~ 403 (812)
|+. -..+.+||+.+.. ...+..++.. ...-.++.+ ++++++.|+.+ ..+.+||+.... ...
T Consensus 156 GG~~~~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~-W~~ 230 (306)
T 3ii7_A 156 GGSLGNNVSGRVLNSCEVYDPATET-WTELCPMIEA-RKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNE-WKM 230 (306)
T ss_dssp CCEESCTTTCEECCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTE-EEE
T ss_pred CCCCCCCCcccccceEEEeCCCCCe-EEECCCccch-hhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCc-EEE
Confidence 653 3458889987532 1222222111 112222232 56677777654 358889986411 111
Q ss_pred eEEcccCCCCEEEEEEccCCCcEEEEEECC-----CCEEEEEcCCC
Q psy4510 404 VATFKHHTAPVTTVEWHPTESSTFASGGAD-----DQIALWDLAVE 444 (812)
Q Consensus 404 ~~~~~~h~~~v~~v~~~p~~~~~l~s~~~d-----g~v~iwd~~~~ 444 (812)
+..+.........+.+ +..+++.|+.+ ..+.+||+.+.
T Consensus 231 ~~~~p~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 231 VSPMPWKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp CCCCSCCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTT
T ss_pred CCCCCCCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCC
Confidence 1111111122223333 23678888754 35777777665
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=94.39 E-value=4.8 Score=40.58 Aligned_cols=115 Identities=11% Similarity=0.088 Sum_probs=66.1
Q ss_pred CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceec--cccccCCCCCEEEEEEcCC---CCeEEEEEE--CCC
Q psy4510 270 GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVD--QKPLVGHTNSVEDLQWSPG---EKRVLASCS--VDL 342 (812)
Q Consensus 270 ~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~--~~~~~~h~~~v~~~~~~p~---~~~~l~s~~--~dg 342 (812)
..-...+.|+|.|++ .++++--..|.|++++...+....+. ...+.........|+++|+ +..+.++-+ .++
T Consensus 29 ~gL~~P~~ia~~pdG-~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~ 107 (347)
T 3das_A 29 TGLNSPWGLAPLPGG-DLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDN 107 (347)
T ss_dssp CCCSSEEEEEECTTS-CEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSE
T ss_pred cCCCCceEEEEcCCC-cEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCC
Confidence 334567899999998 56666544899999986554421111 1122334567899999995 443444433 345
Q ss_pred eEEEEECCCCC-------ccccee-ecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 343 SIRIWDTRVIN-------TKSCML-TLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 343 ~i~iwd~~~~~-------~~~~~~-~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
.|.-|.+.... ....+. .++.........|.|.|+|.++++.+
T Consensus 108 ~v~R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 108 RIVRMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEEEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 56666654311 111111 23222223456799999998666644
No 327
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.34 E-value=4.5 Score=39.98 Aligned_cols=251 Identities=9% Similarity=0.093 Sum_probs=141.7
Q ss_pred CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEe
Q psy4510 387 DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFI 466 (812)
Q Consensus 387 dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 466 (812)
...|.|.|+.+ ...+...-..-. +.-.+|.. .++|.-. ..++.++|+.+. +.+..
T Consensus 48 ~~~VvIiDl~n--~~~~~Rrpi~Ad----sAIMnP~~-~ViALra-g~~LQiFnletK-----------------~klks 102 (365)
T 2xzh_A 48 QAQVVIIDMND--PSNPIRRPISAD----SAIMNPAS-KVIALKA-GKTLQIFNIEMK-----------------SKMKA 102 (365)
T ss_dssp EEEEEEEETTS--TTSCEEEECCCS----EEEECSSS-SEEEEEE-TTEEEEEETTTT-----------------EEEEE
T ss_pred CCEEEEEECCC--CCCccccccccc----eeeeCCCc-cEEEEec-CCeEEEechHHh-----------------hhhcc
Confidence 34799999986 333333322222 33458875 5777665 678999999998 66666
Q ss_pred ecCCCceeEEEEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeecC---CCCeeEEEEcCCCCCeEEEeeC-CCceEEE
Q psy4510 467 HLGQKEIKELHWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHLG---QKEIKELHWHPQLPGTIISTAN-SGFNIFR 542 (812)
Q Consensus 467 ~~~~~~v~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~i~~~~~~p~~~~~~i~~~~-~~~~~~~ 542 (812)
+.-...|.--.|-.. ..++-.+...+.-|.......+..++.... ..+|.....+++..+.++..-. ....+..
T Consensus 103 ~~~~e~VvfWkWis~--~~L~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 103 HTMTDDVTFWKWISL--NTVALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp EECSSCEEEEEECSS--SEEEEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred eecCCccEEEEecCC--CeEEEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 666667776677655 677777777777776554444444443322 3578888888887666554432 2223444
Q ss_pred EeecccCcccccccccccccccCCCCCCccccCCCccceEEecccceEEEEEEeccC--C-eEEEEee-cCcceEEEEec
Q psy4510 543 TISMSNLTSTEEDNERELEDDESEGSGDEDRRKDPVMNSYFIRHRGCINRVRTCQYG--S-TTLAGVW-GEVGKVGIWDL 618 (812)
Q Consensus 543 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~g--~-~l~~~~~-~~dg~I~iwd~ 618 (812)
.+.+.... ....+.+.+|.+.-..+.+.... . .++.+.- ...++++|-++
T Consensus 181 ~mQLYS~e--------------------------r~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi 234 (365)
T 2xzh_A 181 AMQLYSVD--------------------------RKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEV 234 (365)
T ss_dssp EEEEEETT--------------------------TTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEEC
T ss_pred eEEEEeec--------------------------ccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEc
Confidence 44443311 22355667776554443332111 1 2222211 22368888888
Q ss_pred cccccccCCcccccccccccCCCCCCCCCCeeee---cCCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCceeEEE
Q psy4510 619 KTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSF---SGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWSVY 695 (812)
Q Consensus 619 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~~~~~ 695 (812)
...... .+....+....+ .+-.+-..++..|+ .-.++..-+.-|.|.++|+++|..+-..
T Consensus 235 ~~~~~~----------------~~~f~kk~vdi~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~n 297 (365)
T 2xzh_A 235 GTPPTG----------------NQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMN 297 (365)
T ss_dssp SSCCTT----------------CCCCCCEEEEECCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCCC----------------CCCcccccceeeCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEe
Confidence 543100 000011111111 12234566777777 5567777777788888888888877777
Q ss_pred EecCCCCEEEee
Q psy4510 696 LYTNRFGVLATG 707 (812)
Q Consensus 696 ~~s~dg~~lasg 707 (812)
-+|++.-++++.
T Consensus 298 rIS~d~iF~ta~ 309 (365)
T 2xzh_A 298 RISGETIFVTAP 309 (365)
T ss_dssp ECCSSCEEEEEE
T ss_pred ccCCCceEEecc
Confidence 777766555544
No 328
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=94.27 E-value=2.3 Score=42.34 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=107.3
Q ss_pred CCCeEEEecC----CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC----C-----CceEEeeCCC
Q psy4510 188 EPGVLATGDC----KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD----P-----FQLAEHNKKR 254 (812)
Q Consensus 188 ~~~~lat~~~----dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~----d-----~~i~vwd~~~ 254 (812)
++.+++.||. -..+.+||..+..-... ..+......- +++. -+++.++.|+. + ..+.+||..+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~--~~~p~~r~~~-~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~ 99 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTWLRL--ADLQVPRSGL-AGCV-VGGLLYAVGGRNNSPDGNTDSSALDCYNPMT 99 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEEEEC--CCCSSCCBSC-EEEE-ETTEEEEECCEEEETTEEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeEeEC--CCCCcccccc-eEEE-ECCEEEEECCCcCCCCCCeecceEEEECCCC
Confidence 5667777763 23688888876542111 1111111111 2222 25666666664 2 3577888776
Q ss_pred CCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcC
Q psy4510 255 GKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSP 329 (812)
Q Consensus 255 ~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p 329 (812)
.. ...+..+........++.+ ++ .+++.|+.+ ..+.+||+.+.. |.... .+......-..+.+
T Consensus 100 ~~-----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~-~~p~~r~~~~~~~~-- 167 (308)
T 1zgk_A 100 NQ-----WSPCAPMSVPRNRIGVGVI--DG-HIYAVGGSHGCIHHNSVERYEPERDE-WHLVA-PMLTRRIGVGVAVL-- 167 (308)
T ss_dssp TE-----EEECCCCSSCCBTCEEEEE--TT-EEEEECCEETTEECCCEEEEETTTTE-EEECC-CCSSCCBSCEEEEE--
T ss_pred Ce-----EeECCCCCcCccccEEEEE--CC-EEEEEcCCCCCcccccEEEECCCCCe-EeECC-CCCccccceEEEEE--
Confidence 42 1111111111111112222 34 566776643 468889987653 33321 22211112222223
Q ss_pred CCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCCCC
Q psy4510 330 GEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRRFK 399 (812)
Q Consensus 330 ~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~~~ 399 (812)
++ .+++.|+.+ ..+.+||+.+.. ...+..++. ......++.+ ++.+++.|+.+ ..+.+||+....
T Consensus 168 ~~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 168 NR-LLYAVGGFDGTNRLNSAECYYPERNE-WRMITAMNT-IRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp TT-EEEEECCBCSSCBCCCEEEEETTTTE-EEECCCCSS-CCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred CC-EEEEEeCCCCCCcCceEEEEeCCCCe-EeeCCCCCC-ccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 34 477777654 458889987532 111222211 1122233333 56677777764 468999986421
Q ss_pred CCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 400 KGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 400 ~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
...+..+.........+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 243 -W~~~~~~p~~r~~~~~~~~--~-~~i~v~GG~~~~~~~~~v~~yd~~~~ 288 (308)
T 1zgk_A 243 -WTFVAPMKHRRSALGITVH--Q-GRIYVLGGYDGHTFLDSVECYDPDTD 288 (308)
T ss_dssp -EEECCCCSSCCBSCEEEEE--T-TEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred -EEECCCCCCCccceEEEEE--C-CEEEEEcCcCCCcccceEEEEcCCCC
Confidence 1111111111111122222 2 35777777543 4667777654
No 329
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.78 E-value=1.6 Score=43.65 Aligned_cols=185 Identities=10% Similarity=0.099 Sum_probs=88.5
Q ss_pred eEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeC-----C------CceEEeeCCCCCCCC
Q psy4510 191 VLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDD-----P------FQLAEHNKKRGKGPG 259 (812)
Q Consensus 191 ~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~-----d------~~i~vwd~~~~~~~~ 259 (812)
+++.|+ ..+.+||..+.+ +.. ..+..........+...+++.++.|+. . ..+.+||..+..-..
T Consensus 7 l~~~GG--~~~~~yd~~~~~-W~~--~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~ 81 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANE-CYC--ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG 81 (315)
T ss_dssp EEEEET--TEEEEEETTTTE-EEE--EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE
T ss_pred EEEEcC--CceEEECCCCCe-Eec--CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE
Confidence 455666 478999988765 221 222222222233333456777777773 1 126677776642111
Q ss_pred CCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC--------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 260 IPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK--------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 260 ~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d--------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
....|.. ..+| +++.. ++ .+++.|+.+ ..+.+||+.+.. |... ..+......-..+. -++
T Consensus 82 ~~~~p~~-r~~~-----~~~~~-~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~-~~~p~~r~~~~~~~--~~~ 149 (315)
T 4asc_A 82 MPPLPSP-RCLF-----GLGEA-LN-SIYVVGGREIKDGERCLDSVMCYDRLSFK-WGES-DPLPYVVYGHTVLS--HMD 149 (315)
T ss_dssp CCCBSSC-EESC-----EEEEE-TT-EEEEECCEESSTTCCBCCCEEEEETTTTE-EEEC-CCCSSCCBSCEEEE--ETT
T ss_pred CCCCCcc-hhce-----eEEEE-CC-EEEEEeCCcCCCCCcccceEEEECCCCCc-EeEC-CCCCCcccceeEEE--ECC
Confidence 1111100 0111 22222 33 566777642 458899987753 4332 22221111112222 234
Q ss_pred CeEEEEEEC-C-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCC
Q psy4510 332 KRVLASCSV-D-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRR 397 (812)
Q Consensus 332 ~~~l~s~~~-d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~ 397 (812)
. +++.|+. + ..+.+||+.+.. ...+..++.. ...-.++.+ ++++++.|+.++ .+.+||+.+
T Consensus 150 ~-iyv~GG~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 221 (315)
T 4asc_A 150 L-VYVIGGKGSDRKCLNKMCVYDPKKFE-WKELAPMQTA-RSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITD 221 (315)
T ss_dssp E-EEEECCBCTTSCBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTT
T ss_pred E-EEEEeCCCCCCcccceEEEEeCCCCe-EEECCCCCCc-hhceEEEEE--CCEEEEEeccCCCCccceEEEEECCC
Confidence 3 7777776 2 468899987532 1122222111 111222333 567777787654 478888864
No 330
>2cn3_A Xyloglucanase, beta-1,4-xyloglucan hydrolase; glycosylhydrolase, family GH74; HET: GLC BGC GAL; 1.95A {Clostridium thermocellum} PDB: 2cn2_A*
Probab=93.73 E-value=12 Score=42.60 Aligned_cols=247 Identities=11% Similarity=0.065 Sum_probs=113.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCC---CCCCeeeeeEcCCC-CcEEEeeCC-------C
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGG---HTNSAEDLQWSDLK-TALQTVDDP-------F 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~---h~~~V~~l~~s~~~-~~l~s~~~d-------~ 245 (812)
+.|..++++|.+...|..+...|.|..++ +.++.+......+.. ....|.+|++.|.. ..+..+... +
T Consensus 23 g~i~~i~~~p~~~~~~~~~~~~ggv~rS~-D~G~tW~~i~~~~~~~~~~~~~i~~i~~dp~~~~~v~v~~~~~~~~~~~~ 101 (737)
T 2cn3_A 23 GFMPGIVFNETEKDLIYARAAIGGAYRWD-PSTETWIPLLDHFQMDEYSYYGVESIATDPVDPNRVYIVAGMYTNDWLPN 101 (737)
T ss_dssp SCCCEEEECSSSTTCEEEECSSSCEEEEE-TTTTEEEECCTTCCGGGGGGGCEEEEEECSSSTTCEEEEECSCSSSSSCC
T ss_pred ceeeEEEECCCCCCEEEEEecCCcEEEeC-CCCCCEEECcCccCcccccCCCcceEEeCCCCCCEEEEEecccccccccC
Confidence 37889999996667777777666655543 223333321111110 12468999999843 344443321 1
Q ss_pred ceEEeeCCCCCCCCCCCCCceE-Ec--CC---CCcEEEEEecCCCCCEEEEEeCCCcEEEEeC-CCCCcceeccccccC-
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFS-FS--GH---LTEGFAMDWSSTEPGVLATGDCKRNIHIWTP-REAGAWQVDQKPLVG- 317 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~-~~--~h---~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~-~~~~~~~~~~~~~~~- 317 (812)
...||....+... .+.+.. +. ++ ...+..|++.|..+..+..+...|. -||.- ..+..|.... .+..
T Consensus 102 ~~~l~~S~DgG~T---W~~~~~~~~~~~~~~g~~~~~~l~~~p~~~~~v~~g~~~g~-gl~~S~DgG~tW~~~~-~~~~~ 176 (737)
T 2cn3_A 102 MGAILRSTDRGET---WEKTILPFKMGGNMPGRSMGERLAIDPNDNRILYLGTRCGN-GLWRSTDYGVTWSKVE-SFPNP 176 (737)
T ss_dssp CCEEEEESSSSSS---CEEEECSSCCCTTSTTTTSCCCEEECSSCTTCEEEECSTTC-CEEEESSTTSSCEECT-TCCCC
T ss_pred CccEEEeCCCCCC---cccCCCCcccCCCcCcccccceEEECCCCCCEEEEeeccCC-cEEEeCCCCcceeccc-CCCCC
Confidence 2455554443111 111110 00 00 0124679999987677777764321 23433 3334454322 1211
Q ss_pred -------------CCCCEEEEEEcCCCC------eEEEEEECCCeEEEEECCC-CCcccceeecCCcCCCCeEEEEEcCC
Q psy4510 318 -------------HTNSVEDLQWSPGEK------RVLASCSVDLSIRIWDTRV-INTKSCMLTLPNAHTSDVNVISWNRT 377 (812)
Q Consensus 318 -------------h~~~v~~~~~~p~~~------~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v~~l~~~~~ 377 (812)
....+..+.++|... ..+..+..++.-.||-... +.+-..+..++. ......+.++|+
T Consensus 177 ~~~~~~p~~~~~~~~~g~~~v~~dp~~~~~~~~~~~v~~~~~~~~~~v~~S~DgG~tW~~~~~~p~--~~~~~~~~~~~~ 254 (737)
T 2cn3_A 177 GTYIYDPNFDYTKDIIGVVWVVFDKSSSTPGNPTKTIYVGVADKNESIYRSTDGGVTWKAVPGQPK--GLLPHHGVLASN 254 (737)
T ss_dssp CCCBSCTTSTTTCSBCCEEEEEECGGGSCTTSCCSCEEEEESCSSCCEEEESSTTSCCEECTTCCC--SSEEEEEEECTT
T ss_pred cccccCcccccccCCCCEEEEEcCCCCcccCCCCCEEEEEecCCCccEEEEcCCCCceEECCCCCC--cccceEEEECCC
Confidence 123477888887542 1355555454322343332 222222211111 111244567776
Q ss_pred CCEEEEEeCC-------CcEEEEecCCCCCCCceEEcccC-C------CCEEEEEEccCCCcEEEEEECC
Q psy4510 378 EPLIVSGGDD-------GCIHVWDLRRFKKGSSVATFKHH-T------APVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 378 ~~~l~sg~~d-------g~i~iwd~~~~~~~~~~~~~~~h-~------~~v~~v~~~p~~~~~l~s~~~d 433 (812)
+.++++.... ..-.||-... .+..-..+..- . -....|+++|.++..|+.++.+
T Consensus 255 ~~l~~~~~d~~g~y~~~~~g~v~~s~d--~G~tW~~i~~~~~~~~~~~~~~~~i~v~p~~~~~ly~~~~~ 322 (737)
T 2cn3_A 255 GMLYITYGDTCGPYDGNGKGQVWKFNT--RTGEWIDITPIPYSSSDNRFCFAGLAVDRQNPDIIMVTSMN 322 (737)
T ss_dssp SEEEEEEESSCCSSCCSCCEEEEEEET--TTCCEEECCSSCTTSTTCCSEEEEEEECTTCTTCEEEEEEC
T ss_pred CeEEEEecCCCCccccccCceEEEEeC--CCCCEEEccCCCCCCcccccccccEEEcCCCCCEEEEEecc
Confidence 6555544321 2233443221 12222222111 1 1134688898876666666543
No 331
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=93.23 E-value=8.8 Score=39.66 Aligned_cols=250 Identities=12% Similarity=0.037 Sum_probs=115.1
Q ss_pred CceEEEEeCCCCCCeEEEecCCC----cEEEEccCCCCcccccccc--cCC--------CCCCeeeeeEcCC--CCcEEE
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKR----NIHIWTPREAGAWQVDQKP--LGG--------HTNSAEDLQWSDL--KTALQT 240 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg----~v~iwd~~~~~~~~~~~~~--l~~--------h~~~V~~l~~s~~--~~~l~s 240 (812)
..|.++++.|.+...|..++..| .|... .+.+..+...... +.. +...|.+|++.|. ...|.+
T Consensus 55 ~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s-~D~G~tW~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~ 133 (394)
T 3b7f_A 55 HTIHHIVQDPREPERMLMAARTGHLGPTVFRS-DDGGGNWTEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYA 133 (394)
T ss_dssp SEEEEEEECSSSTTCEEEEEEC--CCEEEEEE-SSTTSCCEECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEE
T ss_pred CceEEEEECCCCCCeEEEEecCCCCCccEEEe-CCCCCCceECCccccCCCcccccccccccceeEEEeCCCCCCCEEEE
Confidence 56899999985556555555444 34332 2333333222211 111 2235888999873 455666
Q ss_pred eeCCCceEEeeCCCCCCCCCCCCCceEEc----------------CCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCC
Q psy4510 241 VDDPFQLAEHNKKRGKGPGIPTPPLFSFS----------------GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPRE 304 (812)
Q Consensus 241 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~----------------~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~ 304 (812)
+...+.|...+-... ..+.+..+. .....+.+|.+.|..+..|..+...+.|...+ ..
T Consensus 134 g~~~ggl~~S~DgG~-----tW~~~~~~~~~p~~~~~~~~~~~g~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~-Dg 207 (394)
T 3b7f_A 134 GTSPQGLFRSTDHGA-----SWEPVAGFNDHPMRRAWTGGEQDGTPDGPKMHSILVDPRDPKHLYIGMSSGGVFEST-DA 207 (394)
T ss_dssp EEETTEEEEESSTTS-----BCEECHHHHTCTTHHHHHCCC----CCCCEEEEEEECTTCTTCEEEEEETBEEEEES-ST
T ss_pred EecCCcEEEEcCCCC-----CeEECcCccCCccccccccccccCCCCCCceeEEEECCCCCCEEEEEECCCCEEEEC-CC
Confidence 655555444422111 111111110 12245789999985445555554445444432 22
Q ss_pred CCcceeccccccC-C--------CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee-cCCcCCCCeEEEEE
Q psy4510 305 AGAWQVDQKPLVG-H--------TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT-LPNAHTSDVNVISW 374 (812)
Q Consensus 305 ~~~~~~~~~~~~~-h--------~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~~~~v~~l~~ 374 (812)
+..|......... + ...+.+|.+.|.....|..+...+ |...+-. +.+...+.. ++......+.++++
T Consensus 208 G~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~~~g-l~~s~D~-G~tW~~~~~~l~~~~~~~~~~i~~ 285 (394)
T 3b7f_A 208 GTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQNHCG-IYRMDRR-EGVWKRIGDAMPREVGDIGFPIVV 285 (394)
T ss_dssp TSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEETTE-EEEEETT-TTEEECGGGGSCTTTCSCEEEEEE
T ss_pred CCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEcCCe-EEEeCCC-CCcceECCCCCCCCCccceEEEEE
Confidence 3334332211111 0 135899999997433466666544 4443321 111111111 11100134577888
Q ss_pred cCCC-CEEEEEeC-----------CCcEEEEecCCCCCCCceEEcc-cCC--C-----CEEEEEEccCCCcEEEEEECCC
Q psy4510 375 NRTE-PLIVSGGD-----------DGCIHVWDLRRFKKGSSVATFK-HHT--A-----PVTTVEWHPTESSTFASGGADD 434 (812)
Q Consensus 375 ~~~~-~~l~sg~~-----------dg~i~iwd~~~~~~~~~~~~~~-~h~--~-----~v~~v~~~p~~~~~l~s~~~dg 434 (812)
+|.. ..|+.+.. ++...||.... .++....+. +-. . ....++++|.++..|+.++.++
T Consensus 286 ~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~D--gG~tW~~~~~glp~~~~~~~~~~~~~~~~p~~~~~l~~g~~~g 363 (394)
T 3b7f_A 286 HQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRD--AGESWQRQDRGLPTDQAWLTVKRQAMTADAHAPVGVYFGTTGG 363 (394)
T ss_dssp CSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESS--TTSCCEEECBTSCCSSCCCCCCTBSEEECCSSSCCEEEECTTS
T ss_pred CCCCCCEEEEEeccCCccceeecCCCceeEEEECC--CCCCceECCCCCCCccccceEEEEEEEECCCCCCEEEEEeCCC
Confidence 8643 33444431 33345665543 222222221 100 0 1135788886545566666555
Q ss_pred CEE
Q psy4510 435 QIA 437 (812)
Q Consensus 435 ~v~ 437 (812)
.|.
T Consensus 364 ~l~ 366 (394)
T 3b7f_A 364 EIW 366 (394)
T ss_dssp CEE
T ss_pred eEE
Confidence 554
No 332
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.58 E-value=17 Score=41.37 Aligned_cols=473 Identities=9% Similarity=0.019 Sum_probs=226.2
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.|.++.. . ++. |..|+.+ -+..++..+..........-......|.++....++...+ +... -+..++..++
T Consensus 104 ~i~~i~~-~-~g~-lWigt~~-Gl~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~-- 175 (758)
T 3ott_A 104 DVRTMAL-Q-GDT-LWLGALN-GLYTYQLQSRKLTSFDTRRNGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNG-- 175 (758)
T ss_dssp CEEEEEE-E-TTE-EEEEETT-EEEEEETTTCCEEEECHHHHCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTT--
T ss_pred eEEEEEe-c-CCc-EEEEcCC-cceeEeCCCCeEEEeccCCCCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCC--
Confidence 4666653 3 444 4445544 5778887654421110000011235688888877777655 3443 4667776553
Q ss_pred CCCCCCCceEEc--C----CCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCC
Q psy4510 258 PGIPTPPLFSFS--G----HLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 258 ~~~~~~~~~~~~--~----h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
....+. . ....|.++...+++ +.|-.|.. +-|..++..+..... ...+ ....|.++...+++
T Consensus 176 ------~~~~~~~~~~~~~~~~~i~~i~~d~~~-~~lWigt~-~Gl~~~~~~~~~~~~--~~~l--~~~~i~~i~~d~~g 243 (758)
T 3ott_A 176 ------KFEGIPLPVHSSQSNLFVNSLLEDTTR-QCVWIGTE-GYLFQYFPSTGQIKQ--TEAF--HNNSIKSLALDGNG 243 (758)
T ss_dssp ------EEEEECCCCCTTCSSCCEEEEEEETTT-TEEEEEEE-EEEEEEETTTTEEEE--EEEE--EEEEEEEEEECTTC
T ss_pred ------ceEEecCCCccccccceeEEEEEECCC-CEEEEEEC-CCCeEEcCCCCeEEe--ccCC--CCCeEEEEEEcCCC
Confidence 111111 0 12347888877765 44444543 458888877653111 1111 12458888888888
Q ss_pred CeEEEEEECCCeEEEEECCCCCcccceeec----CCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEc
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINTKSCMLTL----PNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATF 407 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~----~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~ 407 (812)
. |..|+. +-+.+++..+.... ..... ..-....|.++....+|.+. .|+..| +.++... ........
T Consensus 244 ~--lWigT~-~Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lW-iGT~~G-l~~~~~~---~~~~~~~~ 314 (758)
T 3ott_A 244 D--LLAGTD-NGLYVYHNDTTPLQ-HIIHDSRNIQSLTNNIIWNIFADQEHNIW-LGTDYG-ISLSRYN---SALQFIPI 314 (758)
T ss_dssp C--EEEEET-TEEEEECCTTSCCE-EECCCTTCTTSCSCSCEEEEEECTTCCEE-EEESSS-EEEECCC---C-CEEEEH
T ss_pred C--EEEEeC-CceeEEecCCCcEE-EEEcCCCCcCcCCcCeEEEEEEcCCCCEE-EEeCCc-ccccccC---CceeEEec
Confidence 7 444554 45788887643211 11100 01123468999888877643 455556 5554332 11111111
Q ss_pred c-----cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEee------cCCCceeEE
Q psy4510 408 K-----HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIH------LGQKEIKEL 476 (812)
Q Consensus 408 ~-----~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~v~~~ 476 (812)
. .....|.++.-..++. |..|+.+| +..++........ ...+.+ .....|.++
T Consensus 315 ~~~~~~~~~~~v~~i~~D~~g~--lWiGt~~G-l~~~~~~~~~~~~-------------~~~~~~~~~~~~l~~~~v~~i 378 (758)
T 3ott_A 315 SQITGTGDGNQFYSLFRDSKGF--YWFGGANG-LIRFTDPAGERHD-------------AIWYRMGDKTYPLSHNRIRHI 378 (758)
T ss_dssp HHHSCSCCCCBEEEEEECTTCC--EEEEETTE-EEEESCTTSSCCC-------------CEEECTTCSSSCCSCSCEEEE
T ss_pred ccCCCCCCCceEEEEEEcCCCC--EEEeeCCc-ceeecccccccce-------------eEEeccCCcCCCCCCCceEEE
Confidence 1 1234688888777653 55555555 6666654421100 000100 112357788
Q ss_pred EEcCCCCCEEEEEeCCCeEEEEeCCCCCcccEEeec----CCCCeeEEEEcCCCCCeEEEeeCCCceEEEEeecccCccc
Q psy4510 477 HWHPQLPGTIISTANSGFNIFRTISDLPSQLLFIHL----GQKEIKELHWHPQLPGTIISTANSGFNIFRTISMSNLTST 552 (812)
Q Consensus 477 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~i~~~~~~p~~~~~~i~~~~~~~~~~~~~~~~~l~~~ 552 (812)
.-..++. +.+++ .+|+..|............... ....|.++...+++ .+.+++...+...+..-.... .
T Consensus 379 ~~d~~g~-lWigt-~~GL~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g-~lWigT~~~Gl~~~~~~~~~~---~ 452 (758)
T 3ott_A 379 YEDKEQQ-LWIAT-DGSINRYDYATRQFIHYNIVDNTGTYNTNWTYYIFEDTAG-QLWISTCLGGIFVVDKHKLMQ---S 452 (758)
T ss_dssp EECTTSC-EEEEE-TTEEEEEETTTTEEEEEEEECCC--CBSSSEEEEEECTTS-EEEEEESSSCEEEEEHHHHHH---C
T ss_pred EECCCCC-EEEEe-CCcHhhcCcCCCcEEEeecCCCcCCCCCceEEEEEEcCCC-CEEEEECCCceEEEccccccc---c
Confidence 7777653 44444 5677777654332111111111 12356777666552 234444344443332110000 0
Q ss_pred ccccccccccccCCCCCCccccCCCccceEEe---c-ccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCc
Q psy4510 553 EEDNERELEDDESEGSGDEDRRKDPVMNSYFI---R-HRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDP 628 (812)
Q Consensus 553 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~ 628 (812)
. .. .+. ...... + ....|.++...++|...+.+ +..+-|..++..+..-.
T Consensus 453 ~--~~-~~~-----------------~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~~--~t~~Gl~~~d~~~~~~~---- 506 (758)
T 3ott_A 453 T--SG-QYI-----------------AEQNYSVHNGLSGMFINQIIPDNEGNVWVLL--YNNKGIDKINPRTREVT---- 506 (758)
T ss_dssp C--SS-EEE-----------------CSEEECGGGTCSCSCEEEEEECTTSCEEEEE--TTCSSEEEEETTTTEEE----
T ss_pred C--Cc-cee-----------------cccccccccccccceeeeEEEcCCCCEEEEc--cCCCCcEEEeCCCCceE----
Confidence 0 00 000 000000 0 12358888888888866633 23345777887655311
Q ss_pred ccccccccccCCCCCCCCCCeeeec----CCCCceEEEEeCCCCCCeEEecCCCceEEEEecCCCce------------e
Q psy4510 629 FQLAEHNKKRGKGPGIPTPPLFSFS----GHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA------------W 692 (812)
Q Consensus 629 ~~~~~~~~~~~~~~~~~~~~~~~~~----gh~~~V~~l~~sp~~~~~las~s~Dg~v~iWd~~~~~~------------~ 692 (812)
.+. .....+.++.... ++.+.+.. ..| +..++..+++. +
T Consensus 507 ----------------------~~~~~~~~~~~~~~~i~~d~-~g~lWigt-~~G-l~~~~~~~~~~~~~~~~gl~~~~i 561 (758)
T 3ott_A 507 ----------------------KLFADELTGEKSPNYLLCDE-DGLLWVGF-HGG-VMRINPKDESQQSISFGSFSNNEI 561 (758)
T ss_dssp ----------------------EECTTTSCGGGCEEEEEECT-TSCEEEEE-TTE-EEEECC--CCCCBCCCCC---CCE
T ss_pred ----------------------EecCCCcCCCcccceEEECC-CCCEEEEe-cCc-eEEEecCCCceEEecccCCCccce
Confidence 110 0123577787777 56555443 444 66677654321 1
Q ss_pred EEEEecCCCCEEEeecCCCeEEEeecCCCCCcccccccccCCCcceeEeEE-ecCCceeEEeeccCCceEE
Q psy4510 693 SVYLYTNRFGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW-SPGEKRVLASCSVDRSNRI 762 (812)
Q Consensus 693 ~~~~~s~dg~~lasgs~dg~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~f-s~dg~~~L~s~s~Dg~i~i 762 (812)
..+.. .+|+ |-.++..| +..++..+.+. ..+.-....+....+ .++|. |.-|+.+|.+++
T Consensus 562 ~~i~~-~~g~-lWi~t~~G-l~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~G~--l~fG~~~Gl~~f 622 (758)
T 3ott_A 562 LSMTC-VKNS-IWVSTTNG-LWIIDRKTMDA-----RQQNMTNKRFTSLLFDPKEDC--VYLGGADGFGIS 622 (758)
T ss_dssp EEEEE-ETTE-EEEEESSC-EEEEETTTCCE-----EEC--CCCCCSEEEEETTTTE--EEEECBSEEEEE
T ss_pred EEEEE-CCCC-EEEECCCC-eEEEcCCCcee-----EEecCCCCceeeeEEECCCCc--EEEecCCceEEE
Confidence 12222 3454 44444555 77778776542 111111122333444 35776 666777776544
No 333
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=92.13 E-value=5.8 Score=39.25 Aligned_cols=177 Identities=6% Similarity=-0.036 Sum_probs=88.3
Q ss_pred eeEcCCCCcEEEee--CCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCC
Q psy4510 229 LQWSDLKTALQTVD--DPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAG 306 (812)
Q Consensus 229 l~~s~~~~~l~s~~--~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~ 306 (812)
.+|++++++|+-.. .++.-.||.+... ......+..+.. .+|++++..+..+......|.+-++..+.
T Consensus 109 ~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d------Gs~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~ 178 (302)
T 3s25_A 109 IYASLIGNYIYYLHYDTQTATSLYRIRID------GEEKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQS 178 (302)
T ss_dssp EEEEEETTEEEEEEESSSSCEEEEEEETT------SCCCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTE
T ss_pred cEEEEeCCEEEEEeecCCCCceEEEEECC------CCCeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCC
Confidence 36778999888765 3444445544332 133444544433 45677884444454446778888876654
Q ss_pred cceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC-eEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEe
Q psy4510 307 AWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL-SIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGG 385 (812)
Q Consensus 307 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg-~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~ 385 (812)
. ...+. +... ..+.|++..++.+-..++ .|..-++... .. ..+ . ...+ ..|+|++.+|+-+.
T Consensus 179 ~----~~l~~---~~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~--~~--~~L-t--~~~~--~~~~~~g~~Iy~~~ 241 (302)
T 3s25_A 179 E----ALFYD---CNCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNP--NP--VVL-T--EANI--EHYNVYGSLIFYQR 241 (302)
T ss_dssp E----EEEEC---SCEE-EEEEEETTEEEEEEGGGTTEEEEECSSSC--CC--EEC-S--CSCE--EEEEEETTEEEEEE
T ss_pred E----EEEeC---CCcc-ceeeecCCEEEEEEcCCCcEEEEEECCCC--Ce--EEE-e--CCCc--ceEEECCCEEEEEE
Confidence 2 11122 2222 345688986555543332 4545455422 21 222 1 2233 34777888776553
Q ss_pred C--CCcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCCCEEEEE
Q psy4510 386 D--DGCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADDQIALWD 440 (812)
Q Consensus 386 ~--dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd 440 (812)
. .+.|..-++. +.....+... .+..+ ++.+..+..+--..+.|..-+
T Consensus 242 ~~~~~~i~~~~~D----G~~r~~l~~~--~~~~i--~i~~d~Iy~td~~~~~i~~~~ 290 (302)
T 3s25_A 242 GGDNPALCVVKND----GTGFKELAKG--EFCNI--NVTSQYVYFTDFVSNKEYCTS 290 (302)
T ss_dssp CSSSCEEEEEETT----SCCCEEEEES--CEEEE--EECSSEEEEEETTTCCEEEEE
T ss_pred CCCCcEEEEEECC----CCccEEeeCC--ccceE--EEeCCEEEEEECCCCeEEEEE
Confidence 2 3556666664 3333333221 24444 444444444443445544433
No 334
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=91.98 E-value=4.9 Score=39.60 Aligned_cols=190 Identities=9% Similarity=0.093 Sum_probs=93.6
Q ss_pred CCCeEEEecCC-----CcEEEEccCCCCc--ccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCCCC
Q psy4510 188 EPGVLATGDCK-----RNIHIWTPREAGA--WQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKKRG 255 (812)
Q Consensus 188 ~~~~lat~~~d-----g~v~iwd~~~~~~--~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~~~ 255 (812)
++.+++.||.+ ..+.+||+.+... +... ..+......-.++. -+++.++.|+.+ ..+.+||..+.
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~-~~~p~~r~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~d~~~~ 138 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSV-APMNVRRGLAGATT--LGDMIYVSGGFDGSRRHTSMERYDPNID 138 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEE-CCCSSCCBSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTT
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEEC-CCCCCCccceeEEE--ECCEEEEEcccCCCcccceEEEEcCCCC
Confidence 67788888755 4688999877651 2111 12221111112222 256666777643 34777887664
Q ss_pred CCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 256 KGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 256 ~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
....+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+ +
T Consensus 139 -----~W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~d~~~~-~W~~~-~~~p~~r~~~~~~~~--~ 206 (301)
T 2vpj_A 139 -----QWSMLGDMQTAREGAGLVVA--SG-VIYCLGGYDGLNILNSVEKYDPHTG-HWTNV-TPMATKRSGAGVALL--N 206 (301)
T ss_dssp -----EEEEEEECSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTT-EEEEE-CCCSSCCBSCEEEEE--T
T ss_pred -----eEEECCCCCCCcccceEEEE--CC-EEEEECCCCCCcccceEEEEeCCCC-cEEeC-CCCCcccccceEEEE--C
Confidence 11222222111111112222 34 577777654 46889998775 34432 122211112222222 3
Q ss_pred CCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 331 EKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 331 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
+ .+++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+..
T Consensus 207 ~-~i~v~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 207 D-HIYVVGGFDGTAHLSSVEAYNIRTDS-WTTVTSMTTP-RCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp T-EEEEECCBCSSSBCCCEEEEETTTTE-EEEECCCSSC-CBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT
T ss_pred C-EEEEEeCCCCCcccceEEEEeCCCCc-EEECCCCCCc-ccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC
Confidence 3 477777764 468899987532 2222222111 112223333 56677777765 3567788753
No 335
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=91.86 E-value=13 Score=38.35 Aligned_cols=219 Identities=11% Similarity=0.107 Sum_probs=130.6
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
...|.|-|+.....+ .++...+ -+.-.+|..+.||-=. ..++.|+|+++. ..+..+.-. ..|.-
T Consensus 47 ~~~vvIiDl~~~~~~--~rrpi~A-----dsAIMnP~~~iiALra-g~~lQiFnle~K-------~klks~~~~-e~Vvf 110 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNP--IRRPISA-----DSAIMNPASKVIALKA-GKTLQIFNIEMK-------SKMKAHTMT-DDVTF 110 (494)
T ss_dssp CCEEEEEETTSTTSC--EEEECCC-----SEEEECSSSSCEEEEE-TTEEEEEETTTT-------EEEEEEECS-SCCCE
T ss_pred CCeEEEEECCCCCcc--eeccccc-----ceeeeCCCCcEEEEec-CCeEEEEchHHh-------hhhcceecC-CCceE
Confidence 457889998886642 1122211 1344457776665543 788999999884 445554433 35656
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEE------CCCeEEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCS------VDLSIRIW 347 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~------~dg~i~iw 347 (812)
-.|-.. ..|+-.+ +..|+-|++..... +.+.+..| ...|..-..+++.+.++++|- ..|.+.+|
T Consensus 111 WkWis~--~~l~lVT-~taVyHWsi~~~s~---P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLY 184 (494)
T 1bpo_A 111 WKWISL--NTVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (494)
T ss_dssp EEEEET--TEEEEEC-SSEEEEEESSSSCC---CEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCC--CeEEEEc-CCeeEEecccCCCC---chhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEe
Confidence 677655 3555544 46899999976432 22222222 357888888999996665553 34778899
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCCC---CEEEEEeCC---CcEEEEecCCCCCCCc-----eEE-cc---cCCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRTE---PLIVSGGDD---GCIHVWDLRRFKKGSS-----VAT-FK---HHTA 412 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~---~~l~sg~~d---g~i~iwd~~~~~~~~~-----~~~-~~---~h~~ 412 (812)
..... .-..+ .+|......+....+. ++++.+... +.++|-++.....+.+ ... +- .-.+
T Consensus 185 S~er~----~sQ~i-eGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D 259 (494)
T 1bpo_A 185 SVDRK----VSQPI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (494)
T ss_dssp ESTTC----CEEEE-CCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred ecccc----ccchh-eeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence 98732 12223 5665555444433222 144444443 7899999864211111 111 11 1133
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
--.++..++.. .++..-+.-|.|.+||+.++
T Consensus 260 FPvamqvs~ky-gviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 260 FPVAMQISEKH-DVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp CEEEEEEETTT-TEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEecccC-CEEEEEecCceEEEEecccc
Confidence 34678888876 47888888999999999998
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.43 E-value=4.8 Score=39.72 Aligned_cols=189 Identities=12% Similarity=0.096 Sum_probs=90.6
Q ss_pred CCCeEEEecCC-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCC-----ceEEeeCCCCCC
Q psy4510 188 EPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPF-----QLAEHNKKRGKG 257 (812)
Q Consensus 188 ~~~~lat~~~d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~-----~i~vwd~~~~~~ 257 (812)
++.+++.||.+ ..+.+||..+..-.. ...+......-.++. -+++.++.|+.++ .+.+||..+..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~d~~~~~- 135 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQWTS--VANMRDRRSTLGAAV--LNGLLYAVGGFDGSTGLSSVEAYNIKSNE- 135 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEEEE--ECCCSSCCBSCEEEE--ETTEEEEEEEECSSCEEEEEEEEETTTTE-
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCceee--CCCCCccccceEEEE--ECCEEEEEcCCCCCccCceEEEEeCCCCe-
Confidence 67788888754 358888887654211 111221111112222 2566667776543 46677876641
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCC
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPG 330 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 330 (812)
...+..+...... .+++.. ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+ +
T Consensus 136 ----W~~~~~~p~~r~~-~~~~~~-~~-~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~-~~~p~~r~~~~~~~~--~ 204 (302)
T 2xn4_A 136 ----WFHVAPMNTRRSS-VGVGVV-GG-LLYAVGGYDVASRQCLSTVECYNATTN-EWTYI-AEMSTRRSGAGVGVL--N 204 (302)
T ss_dssp ----EEEECCCSSCCBS-CEEEEE-TT-EEEEECCEETTTTEECCCEEEEETTTT-EEEEE-CCCSSCCBSCEEEEE--T
T ss_pred ----EeecCCCCCcccC-ceEEEE-CC-EEEEEeCCCCCCCccccEEEEEeCCCC-cEEEC-CCCccccccccEEEE--C
Confidence 1111111111111 122222 33 566666542 45889998765 34332 122211111222222 3
Q ss_pred CCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCC-----cEEEEecCC
Q psy4510 331 EKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDG-----CIHVWDLRR 397 (812)
Q Consensus 331 ~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg-----~i~iwd~~~ 397 (812)
+ .+++.|+.+ ..+.+||+.+.. ...+..++... ....++.+ ++.+++.|+.++ .+.+||+.+
T Consensus 205 ~-~iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~~~~r-~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~ 276 (302)
T 2xn4_A 205 N-LLYAVGGHDGPLVRKSVEVYDPTTNA-WRQVADMNMCR-RNAGVCAV--NGLLYVVGGDDGSCNLASVEYYNPTT 276 (302)
T ss_dssp T-EEEEECCBSSSSBCCCEEEEETTTTE-EEEECCCSSCC-BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT
T ss_pred C-EEEEECCCCCCcccceEEEEeCCCCC-EeeCCCCCCcc-ccCeEEEE--CCEEEEECCcCCCcccccEEEEcCCC
Confidence 4 477777764 368899987532 22222221111 11222222 566777777653 478888863
No 337
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=91.28 E-value=10 Score=38.47 Aligned_cols=65 Identities=9% Similarity=-0.040 Sum_probs=33.7
Q ss_pred CCCeEEEecCC-CcEEEEccCC-CCcccccccccC-CCCCCeeeeeEcCCCCcEEEeeC-C---------CceEEeeCCC
Q psy4510 188 EPGVLATGDCK-RNIHIWTPRE-AGAWQVDQKPLG-GHTNSAEDLQWSDLKTALQTVDD-P---------FQLAEHNKKR 254 (812)
Q Consensus 188 ~~~~lat~~~d-g~v~iwd~~~-~~~~~~~~~~l~-~h~~~V~~l~~s~~~~~l~s~~~-d---------~~i~vwd~~~ 254 (812)
++.+++.||.+ ..+.+||+.. ...+.. ...+. .....-.++. -+++.++.|+. + ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W~~-~~~~p~~~R~~~~~~~--~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKWTA-LAAFPGGPRDQATSAF--IDGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCEEE-CCCCTTCCCBSCEEEE--ETTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCeeE-CCCCCCCcCccceEEE--ECCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 66777777643 4688888864 233321 22222 1111111222 24666666665 2 3577888876
Q ss_pred C
Q psy4510 255 G 255 (812)
Q Consensus 255 ~ 255 (812)
.
T Consensus 96 ~ 96 (357)
T 2uvk_A 96 N 96 (357)
T ss_dssp T
T ss_pred C
Confidence 4
No 338
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.20 E-value=6.2 Score=39.30 Aligned_cols=103 Identities=11% Similarity=0.183 Sum_probs=50.1
Q ss_pred CEEEEEeCC-------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEEC------CCeEEEEECCCC
Q psy4510 286 GVLATGDCK-------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSV------DLSIRIWDTRVI 352 (812)
Q Consensus 286 ~~l~sg~~d-------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~------dg~i~iwd~~~~ 352 (812)
.+++.|+.+ ..+.+||+.+. .|.... .+......-..+. .++. +++.|+. -..+.+||+.+.
T Consensus 111 ~iyv~GG~~~~~~~~~~~~~~yd~~~~-~W~~~~-~~p~~r~~~~~~~--~~~~-iyv~GG~~~~~~~~~~~~~yd~~~~ 185 (318)
T 2woz_A 111 KIYVVAGKDLQTEASLDSVLCYDPVAA-KWSEVK-NLPIKVYGHNVIS--HNGM-IYCLGGKTDDKKCTNRVFIYNPKKG 185 (318)
T ss_dssp EEEEEEEEBTTTCCEEEEEEEEETTTT-EEEEEC-CCSSCEESCEEEE--ETTE-EEEECCEESSSCBCCCEEEEETTTT
T ss_pred EEEEEcCccCCCCcccceEEEEeCCCC-CEeECC-CCCCcccccEEEE--ECCE-EEEEcCCCCCCCccceEEEEcCCCC
Confidence 577777654 24788888765 343321 1111111111122 2444 6676654 235889998753
Q ss_pred CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 353 NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 353 ~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.+
T Consensus 186 ~-W~~~~~~p~~-r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 231 (318)
T 2woz_A 186 D-WKDLAPMKTP-RSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT 231 (318)
T ss_dssp E-EEEECCCSSC-CBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT
T ss_pred E-EEECCCCCCC-cccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC
Confidence 2 1222222111 111222332 46677777654 3467888864
No 339
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=90.88 E-value=31 Score=41.53 Aligned_cols=220 Identities=10% Similarity=0.100 Sum_probs=123.3
Q ss_pred CCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEE
Q psy4510 198 KRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFA 277 (812)
Q Consensus 198 dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~ 277 (812)
...|.|-|+..+..+ .++...+ -+.-.+|..+.||-= ...++.|+++.+. ..+.++.- ...|.-
T Consensus 47 ~~~vvIidl~~~~~~--~rrpi~A-----dsAIMnP~~~iiALr-ag~~lQiFnl~~k-------~klks~~~-~e~Vvf 110 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNP--IRRPISA-----DSAIMNPASKVIALK-AGKTLQIFNIEMK-------SKMKAHTM-TDDVTF 110 (1630)
T ss_pred CceEEEEECCCCCCc--ccccccc-----hhhccCCCcceEEEe-cCCeEEEeehHHh-------hhhccccc-CCCceE
Confidence 447888898876542 1121211 123334666655443 4788999999874 44444433 245666
Q ss_pred EEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC----CCCEEEEEEcCCCCeEEEEEE------CCCeEEEE
Q psy4510 278 MDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH----TNSVEDLQWSPGEKRVLASCS------VDLSIRIW 347 (812)
Q Consensus 278 l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~~l~s~~------~dg~i~iw 347 (812)
-.|-... .|+-.+ +..|..|++..... +.+.+..| ...|..-..+++.+.++++|- ..|.+.+|
T Consensus 111 WkWis~~--~l~lVT-~~aVyHW~~~~~s~---P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLy 184 (1630)
T 1xi4_A 111 WKWISLN--TVALVT-DNAVYHWSMEGESQ---PVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLY 184 (1630)
T ss_pred EEecCCC--eeEEEc-CCeEEEeccCCCCc---cHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeee
Confidence 6776654 444333 36799999975332 33344444 456777788899986655553 35788999
Q ss_pred ECCCCCcccceeecCCcCCCCeEEEEEcCC---CCEEEEEeC---CCcEEEEecCCCCCCCceE------Eccc---CCC
Q psy4510 348 DTRVINTKSCMLTLPNAHTSDVNVISWNRT---EPLIVSGGD---DGCIHVWDLRRFKKGSSVA------TFKH---HTA 412 (812)
Q Consensus 348 d~~~~~~~~~~~~~~~~~~~~v~~l~~~~~---~~~l~sg~~---dg~i~iwd~~~~~~~~~~~------~~~~---h~~ 412 (812)
.+....+ ..+ .+|.+....+..... ..+++.+.. .+.++|-++.....+.+.. .+-. -.+
T Consensus 185 S~er~~s----Q~i-egha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~D 259 (1630)
T 1xi4_A 185 SVDRKVS----QPI-EGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (1630)
T ss_pred ecccccc----hhh-hHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccC
Confidence 8863221 112 455444333332211 113332222 2689999885421111111 1111 122
Q ss_pred CEEEEEEccCCCcEEEEEECCCCEEEEEcCCCC
Q psy4510 413 PVTTVEWHPTESSTFASGGADDQIALWDLAVER 445 (812)
Q Consensus 413 ~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~~ 445 (812)
--.++..++.. .++..-+.-|.|.++|+.++.
T Consensus 260 fpv~~~vs~k~-g~iy~itk~G~~~~~d~~t~~ 291 (1630)
T 1xi4_A 260 FPVAMQISEKH-DVVFLITKYGYIHLYDLETGT 291 (1630)
T ss_pred cceEEEecccc-CEEEEEecCceEEEEecccch
Confidence 23467777765 377777888999999999984
No 340
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=90.48 E-value=6.2 Score=38.98 Aligned_cols=189 Identities=9% Similarity=0.094 Sum_probs=92.0
Q ss_pred CCCeEEEecCC----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC------CceEEeeCCCCCC
Q psy4510 188 EPGVLATGDCK----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP------FQLAEHNKKRGKG 257 (812)
Q Consensus 188 ~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d------~~i~vwd~~~~~~ 257 (812)
++.+++.||.+ ..+.+||+.+..-.. ...+......-.++. -+++.++.|+.+ ..+.+||..+..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~- 129 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYS--KLGPPTPRDSLAACA--AEGKIYTSGGSEVGNSALYLFECYDTRTES- 129 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEE--EECCSSCCBSCEEEE--ETTEEEEECCBBTTBSCCCCEEEEETTTTE-
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEE--CCCCCccccceeEEE--ECCEEEEECCCCCCCcEeeeEEEEeCCCCc-
Confidence 66788888754 568888887754211 111211111112222 256666777654 347788877641
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC---------CCcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC---------KRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~---------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
...+..+......-.++.+ ++ .+++.|+. -..+.+||+.+. .|.... .+......-..+.+
T Consensus 130 ----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~~~~~yd~~~~-~W~~~~-~~p~~r~~~~~~~~- 199 (306)
T 3ii7_A 130 ----WHTKPSMLTQRCSHGMVEA--NG-LIYVCGGSLGNNVSGRVLNSCEVYDPATE-TWTELC-PMIEARKNHGLVFV- 199 (306)
T ss_dssp ----EEEECCCSSCCBSCEEEEE--TT-EEEEECCEESCTTTCEECCCEEEEETTTT-EEEEEC-CCSSCCBSCEEEEE-
T ss_pred ----eEeCCCCcCCcceeEEEEE--CC-EEEEECCCCCCCCcccccceEEEeCCCCC-eEEECC-CccchhhcceEEEE-
Confidence 1111111110111112222 33 56666653 345889998876 344322 22211111122222
Q ss_pred CCCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecCC
Q psy4510 329 PGEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLRR 397 (812)
Q Consensus 329 p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~~ 397 (812)
++. +++.|+.+ ..+.+||+.+.. ...+..++ .......++.+ ++.+++.|+.+ ..+.+||+..
T Consensus 200 -~~~-i~v~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p-~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 272 (306)
T 3ii7_A 200 -KDK-IFAVGGQNGLGGLDNVEYYDIKLNE-WKMVSPMP-WKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET 272 (306)
T ss_dssp -TTE-EEEECCEETTEEBCCEEEEETTTTE-EEECCCCS-CCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT
T ss_pred -CCE-EEEEeCCCCCCCCceEEEeeCCCCc-EEECCCCC-CCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC
Confidence 344 67777653 468889987532 22222221 11222333333 56688888754 4577888763
No 341
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=89.01 E-value=8.2 Score=38.21 Aligned_cols=188 Identities=11% Similarity=0.070 Sum_probs=90.5
Q ss_pred CCCeEEEecC----C-----CcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-----CceEEeeCC
Q psy4510 188 EPGVLATGDC----K-----RNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-----FQLAEHNKK 253 (812)
Q Consensus 188 ~~~~lat~~~----d-----g~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-----~~i~vwd~~ 253 (812)
++.+++.||. + ..+.+||+.+..-.. ...+......-.++.+ +++.++.|+.+ ..+.+||..
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~ 145 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSP--CAPMSVPRNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPE 145 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEEEE--CCCCSSCCBTCEEEEE--TTEEEEECCEETTEECCCEEEEETT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeEeE--CCCCCcCccccEEEEE--CCEEEEEcCCCCCcccccEEEECCC
Confidence 6677777776 2 457888887654211 1112211111222222 56666666633 357788877
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCC-----CcEEEEeCCCCCcceeccccccCCCCCEEEEEEc
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCK-----RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWS 328 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~d-----g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~ 328 (812)
+.. ...+..+......-.++.+ ++ .+++.|+.+ ..+.+||+.+. .|... ..+.........+.+
T Consensus 146 ~~~-----W~~~~~~p~~r~~~~~~~~--~~-~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~-~~~p~~r~~~~~~~~- 214 (308)
T 1zgk_A 146 RDE-----WHLVAPMLTRRIGVGVAVL--NR-LLYAVGGFDGTNRLNSAECYYPERN-EWRMI-TAMNTIRSGAGVCVL- 214 (308)
T ss_dssp TTE-----EEECCCCSSCCBSCEEEEE--TT-EEEEECCBCSSCBCCCEEEEETTTT-EEEEC-CCCSSCCBSCEEEEE-
T ss_pred CCe-----EeECCCCCccccceEEEEE--CC-EEEEEeCCCCCCcCceEEEEeCCCC-eEeeC-CCCCCccccceEEEE-
Confidence 642 1111111111111112222 33 677777654 46889998765 34332 122211122222333
Q ss_pred CCCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC-----CcEEEEecC
Q psy4510 329 PGEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD-----GCIHVWDLR 396 (812)
Q Consensus 329 p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d-----g~i~iwd~~ 396 (812)
++ .+++.|+.+ ..+.+||+.+.. ...+..++.. .....++.+ ++.+++.|+.+ ..+.+||+.
T Consensus 215 -~~-~iyv~GG~~~~~~~~~v~~yd~~~~~-W~~~~~~p~~-r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~ 286 (308)
T 1zgk_A 215 -HN-CIYAAGGYDGQDQLNSVERYDVETET-WTFVAPMKHR-RSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPD 286 (308)
T ss_dssp -TT-EEEEECCBCSSSBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETT
T ss_pred -CC-EEEEEeCCCCCCccceEEEEeCCCCc-EEECCCCCCC-ccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCC
Confidence 34 477777764 568899987532 1122222111 112222222 46677777754 346777775
No 342
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.51 E-value=19 Score=40.53 Aligned_cols=201 Identities=12% Similarity=0.011 Sum_probs=98.5
Q ss_pred CCCeEEEecCC----CcEEEEccCCCCccccccc----ccCCCCCCeeeeeEcCCCCcEEEeeCCC------ceEEeeCC
Q psy4510 188 EPGVLATGDCK----RNIHIWTPREAGAWQVDQK----PLGGHTNSAEDLQWSDLKTALQTVDDPF------QLAEHNKK 253 (812)
Q Consensus 188 ~~~~lat~~~d----g~v~iwd~~~~~~~~~~~~----~l~~h~~~V~~l~~s~~~~~l~s~~~d~------~i~vwd~~ 253 (812)
++.+++.||.+ ..+.+||+.+..-...... .+......-.++.+..+++.++.|+.++ .+.+||..
T Consensus 397 ~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~ 476 (695)
T 2zwa_A 397 GNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMK 476 (695)
T ss_dssp SSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETT
T ss_pred CCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCC
Confidence 67788888753 4688888877642211100 0111111222233322777777777432 46778877
Q ss_pred CCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCC--cEEEEeCCCCCcceeccc--cccCCCCCEEEEEEcC
Q psy4510 254 RGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKR--NIHIWTPREAGAWQVDQK--PLVGHTNSVEDLQWSP 329 (812)
Q Consensus 254 ~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg--~i~vwd~~~~~~~~~~~~--~~~~h~~~v~~~~~~p 329 (812)
+.. ...+..+.... .-.+++...++ .+++.|+.++ .+.+||+.+. .|..... .+........++.+..
T Consensus 477 t~~-----W~~~~~~p~~R-~~h~~~~~~~~-~iyv~GG~~~~~~v~~yd~~t~-~W~~~~~~g~~p~~r~~~~a~v~~~ 548 (695)
T 2zwa_A 477 TRE-----WSMIKSLSHTR-FRHSACSLPDG-NVLILGGVTEGPAMLLYNVTEE-IFKDVTPKDEFFQNSLVSAGLEFDP 548 (695)
T ss_dssp TTE-----EEECCCCSBCC-BSCEEEECTTS-CEEEECCBCSSCSEEEEETTTT-EEEECCCSSGGGGSCCBSCEEEEET
T ss_pred CCc-----EEECCCCCCCc-ccceEEEEcCC-EEEEECCCCCCCCEEEEECCCC-ceEEccCCCCCCCcccceeEEEEeC
Confidence 641 11111111111 11123332344 6788887654 6999998875 3443321 1111122223455565
Q ss_pred CCCeEEEEEEC--C-----CeEEEEECCCCCc-----ccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC--------Cc
Q psy4510 330 GEKRVLASCSV--D-----LSIRIWDTRVINT-----KSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD--------GC 389 (812)
Q Consensus 330 ~~~~~l~s~~~--d-----g~i~iwd~~~~~~-----~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d--------g~ 389 (812)
....+++.|+. + ..+.+||+.+..- ...+...+........++.+ .++.+++.||.+ ..
T Consensus 549 ~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~ 627 (695)
T 2zwa_A 549 VSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNS 627 (695)
T ss_dssp TTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTS
T ss_pred CCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCe
Confidence 53447777765 2 4688999886431 11111111111112222322 236677777743 45
Q ss_pred EEEEecCC
Q psy4510 390 IHVWDLRR 397 (812)
Q Consensus 390 i~iwd~~~ 397 (812)
|.+||+..
T Consensus 628 v~~yd~~t 635 (695)
T 2zwa_A 628 IISLDPLS 635 (695)
T ss_dssp EEEEETTT
T ss_pred EEEEECCC
Confidence 77888763
No 343
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=84.29 E-value=33 Score=33.68 Aligned_cols=121 Identities=4% Similarity=-0.113 Sum_probs=63.6
Q ss_pred EEeccCCeEEEEee--cCcceEEEEeccccccccCCcccccccccccCCCCCCCCCCeeeecCCCCceEEEEeCCCCCCe
Q psy4510 594 RTCQYGSTTLAGVW--GEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGV 671 (812)
Q Consensus 594 ~~s~~g~~l~~~~~--~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gh~~~V~~l~~sp~~~~~ 671 (812)
.+++++++|+-... .....|+.-++.... ...+..+.. .+|+|++..+
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~--------------------------~~~lt~~~~----~~~~~~g~~i 159 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEE--------------------------KKKIKNHYL----FTCNTSDRYF 159 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCC--------------------------CEEEESSCC----CCSEEETTEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCC--------------------------eEEEeCCCc----eEeeEECCEE
Confidence 67889998887621 234455555555432 122322322 4566733334
Q ss_pred EEecCCCceEEEEecCCCceeEE------EEecCCCCEEEeecCC--CeEEEeecCCCCCcccccccccCCCcceeEeEE
Q psy4510 672 LATGDCKRNIHIWTPREAGAWSV------YLYTNRFGVLATGDCK--RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQW 743 (812)
Q Consensus 672 las~s~Dg~v~iWd~~~~~~~~~------~~~s~dg~~lasgs~d--g~i~iwd~~~~~~~~~~~~~~~gH~~~V~~l~f 743 (812)
..+.....+|.+-++.++....+ ..+.|++++|+-.... ..|..-++..... ..+.. ..+ ..|
T Consensus 160 y~t~~g~~~Iy~~~l~g~~~~~l~~~~~~~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-----~~Lt~--~~~--~~~ 230 (302)
T 3s25_A 160 YYNNPKNGQLYRYDTASQSEALFYDCNCYKPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-----VVLTE--ANI--EHY 230 (302)
T ss_dssp EEECTTTCCEEEEETTTTEEEEEECSCEEEEEEEETTEEEEEEGGGTTEEEEECSSSCCC-----EECSC--SCE--EEE
T ss_pred EEEeCCCceEEEEECCCCCEEEEeCCCccceeeecCCEEEEEEcCCCcEEEEEECCCCCe-----EEEeC--CCc--ceE
Confidence 44544456777777665432221 2355888888766543 3555555554432 22322 123 347
Q ss_pred ecCCceeEEee
Q psy4510 744 SPGEKRVLASC 754 (812)
Q Consensus 744 s~dg~~~L~s~ 754 (812)
+|++++ |.-+
T Consensus 231 ~~~g~~-Iy~~ 240 (302)
T 3s25_A 231 NVYGSL-IFYQ 240 (302)
T ss_dssp EEETTE-EEEE
T ss_pred EECCCE-EEEE
Confidence 888884 5544
No 344
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=83.33 E-value=18 Score=38.18 Aligned_cols=116 Identities=16% Similarity=0.122 Sum_probs=64.1
Q ss_pred CcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCc--ceecc-cccc-----CCCCCEEEEEEcCC---CCeEEEEEECC
Q psy4510 273 TEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGA--WQVDQ-KPLV-----GHTNSVEDLQWSPG---EKRVLASCSVD 341 (812)
Q Consensus 273 ~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~--~~~~~-~~~~-----~h~~~v~~~~~~p~---~~~~l~s~~~d 341 (812)
..-+.|+|.|++...|+++...|.|++++...... ....+ ..+. ........|+|+|+ ...+.++-+.+
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 34579999999843566667889999997543211 00011 1111 12457889999996 33345544321
Q ss_pred ------------CeEEEEECCCCC-------cccceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCC
Q psy4510 342 ------------LSIRIWDTRVIN-------TKSCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDG 388 (812)
Q Consensus 342 ------------g~i~iwd~~~~~-------~~~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg 388 (812)
..|.-|.+.... ....+..+. .........|+|.|+|.+.++.+..+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~~ 160 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDGM 160 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCTT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCCC
Confidence 134445554211 112233322 12223468899999998666665543
No 345
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=83.26 E-value=19 Score=36.42 Aligned_cols=23 Identities=17% Similarity=0.499 Sum_probs=16.3
Q ss_pred CCCeEEEecC-C---------CcEEEEccCCCC
Q psy4510 188 EPGVLATGDC-K---------RNIHIWTPREAG 210 (812)
Q Consensus 188 ~~~~lat~~~-d---------g~v~iwd~~~~~ 210 (812)
++.+++.||. + ..+.+||+.+..
T Consensus 65 ~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~~~ 97 (357)
T 2uvk_A 65 DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKTNS 97 (357)
T ss_dssp TTEEEEECCEEECTTSCEEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCCCccceeeccEEEEeCCCCc
Confidence 6677777776 2 468888887754
No 346
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=81.64 E-value=50 Score=33.79 Aligned_cols=228 Identities=9% Similarity=0.024 Sum_probs=103.1
Q ss_pred CCeEEEecCCCcEEEEccCC-CCcccccccccCCCCCCeeeeeEcC-CCCcEEEeeCCC----ceEEeeCCCCCCCCCCC
Q psy4510 189 PGVLATGDCKRNIHIWTPRE-AGAWQVDQKPLGGHTNSAEDLQWSD-LKTALQTVDDPF----QLAEHNKKRGKGPGIPT 262 (812)
Q Consensus 189 ~~~lat~~~dg~v~iwd~~~-~~~~~~~~~~l~~h~~~V~~l~~s~-~~~~l~s~~~d~----~i~vwd~~~~~~~~~~~ 262 (812)
...|..|+..| +.+++... +..+...... .-...|.+|++.| +...|.++...+ .|...+ +.+. ..
T Consensus 22 ~g~l~vgt~~G-l~~~~~~~~g~~W~~~~~~--~~~~~v~~i~~dp~~~~~l~~g~~~g~~g~gl~~s~-D~G~----tW 93 (394)
T 3b7f_A 22 PVMLLVATIKG-AWFLASDPARRTWELRGPV--FLGHTIHHIVQDPREPERMLMAARTGHLGPTVFRSD-DGGG----NW 93 (394)
T ss_dssp CCEEEEEETTE-EEEEEECTTSCSEEEEEEE--STTSEEEEEEECSSSTTCEEEEEEC--CCEEEEEES-STTS----CC
T ss_pred CCEEEEEecCc-eEEEECCCCCCCceECCcc--CCCCceEEEEECCCCCCeEEEEecCCCCCccEEEeC-CCCC----Cc
Confidence 44666666666 55554432 2333211111 1235699999998 233444444444 333322 2221 11
Q ss_pred CCceE---EcC--------CCCcEEEEEecCCC-CCEEEEEeCCCcEEEEeCCCCCcceeccccc---------------
Q psy4510 263 PPLFS---FSG--------HLTEGFAMDWSSTE-PGVLATGDCKRNIHIWTPREAGAWQVDQKPL--------------- 315 (812)
Q Consensus 263 ~~~~~---~~~--------h~~~v~~l~~sp~~-~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~--------------- 315 (812)
+.+.. +.. +...|.+|++.|.. +..|..+...+.|...+ ..+..|.......
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~~~~~~~l~~g~~~ggl~~S~-DgG~tW~~~~~~~~~p~~~~~~~~~~~g 172 (394)
T 3b7f_A 94 TEATRPPAFNKAPEGETGRVVDHVFWLTPGHASEPGTWYAGTSPQGLFRST-DHGASWEPVAGFNDHPMRRAWTGGEQDG 172 (394)
T ss_dssp EECSBCCCCCCCC----CCCCCEEEEEEECCTTSTTCEEEEEETTEEEEES-STTSBCEECHHHHTCTTHHHHHCCC---
T ss_pred eECCccccCCCcccccccccccceeEEEeCCCCCCCEEEEEecCCcEEEEc-CCCCCeEECcCccCCccccccccccccC
Confidence 11110 111 12357889998743 35666665556554432 2233343321100
Q ss_pred cCCCCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcccceee-cCCcC--------CCCeEEEEEcCCC-CEEEEEe
Q psy4510 316 VGHTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTKSCMLT-LPNAH--------TSDVNVISWNRTE-PLIVSGG 385 (812)
Q Consensus 316 ~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~-~~~~~--------~~~v~~l~~~~~~-~~l~sg~ 385 (812)
......+.+|.+.|.....+..+..++.|...+- .+.+-..+.. ....+ ...+.+|.++|.. ..|+.+.
T Consensus 173 ~~~~~~i~~i~~d~~~~~~l~vg~~~ggl~~s~D-gG~tW~~~~~~~~~~~~p~~~~~~g~~~~~i~~~~~~~~~l~vg~ 251 (394)
T 3b7f_A 173 TPDGPKMHSILVDPRDPKHLYIGMSSGGVFESTD-AGTDWKPLNRGCAANFLPDPNVEFGHDPHCVVQHPAAPDILYQQN 251 (394)
T ss_dssp -CCCCEEEEEEECTTCTTCEEEEEETBEEEEESS-TTSSCEECCTTCCCTTSSSSSSSSCBCEEEEEECSSSTTEEEEEE
T ss_pred CCCCCceeEEEECCCCCCEEEEEECCCCEEEECC-CCCCceECCCCccccccCCCccccCcceeEEEECCCCCCEEEEEc
Confidence 0123468899999843222444443444433321 1111111110 00000 1358999999863 4666666
Q ss_pred CCCcEEEEecCCCCCCCceEEccc--CC---CCEEEEEEccCCCcEEEEEE
Q psy4510 386 DDGCIHVWDLRRFKKGSSVATFKH--HT---APVTTVEWHPTESSTFASGG 431 (812)
Q Consensus 386 ~dg~i~iwd~~~~~~~~~~~~~~~--h~---~~v~~v~~~p~~~~~l~s~~ 431 (812)
..+ |...+- .+.....+.. .. ..+..+.++|..+..|..+.
T Consensus 252 ~~g-l~~s~D----~G~tW~~~~~~l~~~~~~~~~~i~~~p~~~~~l~~~t 297 (394)
T 3b7f_A 252 HCG-IYRMDR----REGVWKRIGDAMPREVGDIGFPIVVHQRDPRTVWVFP 297 (394)
T ss_dssp TTE-EEEEET----TTTEEECGGGGSCTTTCSCEEEEEECSSCTTCEEEEE
T ss_pred CCe-EEEeCC----CCCcceECCCCCCCCCccceEEEEECCCCCCEEEEEe
Confidence 555 443332 1222222221 11 34677888875444455543
No 347
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=80.87 E-value=43 Score=32.91 Aligned_cols=179 Identities=12% Similarity=0.131 Sum_probs=82.4
Q ss_pred CceEEeeCCCCCCCCCCCCCceEEcCCC-CcEEEEEecCCCCCEEEEEeC----C-------CcEEEEeCCCCCcceecc
Q psy4510 245 FQLAEHNKKRGKGPGIPTPPLFSFSGHL-TEGFAMDWSSTEPGVLATGDC----K-------RNIHIWTPREAGAWQVDQ 312 (812)
Q Consensus 245 ~~i~vwd~~~~~~~~~~~~~~~~~~~h~-~~v~~l~~sp~~~~~l~sg~~----d-------g~i~vwd~~~~~~~~~~~ 312 (812)
..+.+||..++. .. ...+.... ..-.+++. .++ .+++.|+. + ..+.+||+.+.. |...
T Consensus 13 ~~~~~yd~~~~~-----W~-~~~~~~p~~r~~~~~~~-~~~-~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~-W~~~- 82 (315)
T 4asc_A 13 EGAVAYDPAANE-----CY-CASLSSQVPKNHVSLVT-KEN-QVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSE-WLGM- 82 (315)
T ss_dssp TEEEEEETTTTE-----EE-EEECCCCSCSSEEEEEC-TTC-CEEEEEEEEECSSCSSSCEEEEEEEEETTTTE-EEEC-
T ss_pred CceEEECCCCCe-----Ee-cCCCCCCCCccceEEEE-ECC-EEEEEcCcccCCCCCccccccceEEecCCCCe-EEEC-
Confidence 567788877641 11 11221111 12223333 344 67777773 1 127788887653 4322
Q ss_pred ccccCCCCCEEEEEEcCCCCeEEEEEECC--------CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEE
Q psy4510 313 KPLVGHTNSVEDLQWSPGEKRVLASCSVD--------LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSG 384 (812)
Q Consensus 313 ~~~~~h~~~v~~~~~~p~~~~~l~s~~~d--------g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg 384 (812)
..+......-..+.+ ++ .+++.|+.+ ..+.+||+.+.. -..+..++.. ...-.++. -++.+++.|
T Consensus 83 ~~~p~~r~~~~~~~~--~~-~lyv~GG~~~~~~~~~~~~~~~~d~~~~~-W~~~~~~p~~-r~~~~~~~--~~~~iyv~G 155 (315)
T 4asc_A 83 PPLPSPRCLFGLGEA--LN-SIYVVGGREIKDGERCLDSVMCYDRLSFK-WGESDPLPYV-VYGHTVLS--HMDLVYVIG 155 (315)
T ss_dssp CCBSSCEESCEEEEE--TT-EEEEECCEESSTTCCBCCCEEEEETTTTE-EEECCCCSSC-CBSCEEEE--ETTEEEEEC
T ss_pred CCCCcchhceeEEEE--CC-EEEEEeCCcCCCCCcccceEEEECCCCCc-EeECCCCCCc-ccceeEEE--ECCEEEEEe
Confidence 122111111112222 33 467777642 458889987532 1222222111 11122222 345677777
Q ss_pred eC-C-----CcEEEEecCCCCCCCceEEcccCCCCEEEEEEccCCCcEEEEEECCC-----CEEEEEcCCC
Q psy4510 385 GD-D-----GCIHVWDLRRFKKGSSVATFKHHTAPVTTVEWHPTESSTFASGGADD-----QIALWDLAVE 444 (812)
Q Consensus 385 ~~-d-----g~i~iwd~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg-----~v~iwd~~~~ 444 (812)
+. + ..+.+||+.+.. ...+..+......-..+.+ + ..+++.|+.++ .+.+||+.+.
T Consensus 156 G~~~~~~~~~~~~~yd~~~~~-W~~~~~~p~~r~~~~~~~~--~-~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 156 GKGSDRKCLNKMCVYDPKKFE-WKELAPMQTARSLFGATVH--D-GRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp CBCTTSCBCCCEEEEETTTTE-EEECCCCSSCCBSCEEEEE--T-TEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCCCCCcccceEEEEeCCCCe-EEECCCCCCchhceEEEEE--C-CEEEEEeccCCCCccceEEEEECCCC
Confidence 76 2 468899986421 1111111111111122222 3 36777787654 4777887765
No 348
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=78.29 E-value=71 Score=33.56 Aligned_cols=114 Identities=11% Similarity=0.028 Sum_probs=58.5
Q ss_pred CceEEEEeCCCCCC-eEEEecCCCcEEEEccCCCCc--ccccc-ccc-C----CCCCCeeeeeEcCC----CCcEEEeeC
Q psy4510 177 TEGFAMDWSSTEPG-VLATGDCKRNIHIWTPREAGA--WQVDQ-KPL-G----GHTNSAEDLQWSDL----KTALQTVDD 243 (812)
Q Consensus 177 ~~i~~~~~sp~~~~-~lat~~~dg~v~iwd~~~~~~--~~~~~-~~l-~----~h~~~V~~l~~s~~----~~~l~s~~~ 243 (812)
...+.|+|.| ++. .|+++...|.|++++...... ....+ ..+ . ........|+|+|+ +...++-+.
T Consensus 14 ~~P~~~a~~p-dG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~ 92 (463)
T 2wg3_C 14 RQPVGALHSG-DGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTT 92 (463)
T ss_dssp SSEEEEECCS-SSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEE
T ss_pred CCceEEEECC-CCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeC
Confidence 4568899999 885 444455679999997543211 10011 111 1 12467889999996 333333221
Q ss_pred --C----------CceEEeeCCCCCCCCC---CCCCceEEc--CCCCcEEEEEecCCCCCEEEEEe
Q psy4510 244 --P----------FQLAEHNKKRGKGPGI---PTPPLFSFS--GHLTEGFAMDWSSTEPGVLATGD 292 (812)
Q Consensus 244 --d----------~~i~vwd~~~~~~~~~---~~~~~~~~~--~h~~~v~~l~~sp~~~~~l~sg~ 292 (812)
+ ..|.-|.+..+..... ..+.+..+. ........|+|.|++ .+.++.+
T Consensus 93 ~~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG-~LYv~~G 157 (463)
T 2wg3_C 93 NQERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDG-FLYIILG 157 (463)
T ss_dssp CCCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTS-CEEEEEC
T ss_pred CCCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCC-cEEEEeC
Confidence 1 1344465543210000 112223322 112346799999999 4544433
No 349
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=75.29 E-value=56 Score=36.62 Aligned_cols=153 Identities=13% Similarity=0.121 Sum_probs=75.9
Q ss_pred CCCCEEEEEeCC------CcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEEEECCC--eEEEEECCCCCc
Q psy4510 283 TEPGVLATGDCK------RNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLASCSVDL--SIRIWDTRVINT 354 (812)
Q Consensus 283 ~~~~~l~sg~~d------g~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg--~i~iwd~~~~~~ 354 (812)
++ .+++.|+.+ ..+.+||+.+. .|... ..+...... .+++...++. +++.|+.++ .+.+||+.+..
T Consensus 451 ~~-~lyv~GG~~~~~~~~~dv~~yd~~t~-~W~~~-~~~p~~R~~-h~~~~~~~~~-iyv~GG~~~~~~v~~yd~~t~~- 524 (695)
T 2zwa_A 451 NN-QLLLIGGRKAPHQGLSDNWIFDMKTR-EWSMI-KSLSHTRFR-HSACSLPDGN-VLILGGVTEGPAMLLYNVTEEI- 524 (695)
T ss_dssp TT-EEEEECCBSSTTCBCCCCEEEETTTT-EEEEC-CCCSBCCBS-CEEEECTTSC-EEEECCBCSSCSEEEEETTTTE-
T ss_pred CC-EEEEEcCCCCCCCccccEEEEeCCCC-cEEEC-CCCCCCccc-ceEEEEcCCE-EEEECCCCCCCCEEEEECCCCc-
Confidence 44 677777653 35788898775 34332 222211111 1222223555 788887654 68999987532
Q ss_pred ccceee---cCCcCCCCeEEEEEcCC-CCEEEEEeC--C-----CcEEEEecCCCCC-----CCceEEcc-cCCCCEEEE
Q psy4510 355 KSCMLT---LPNAHTSDVNVISWNRT-EPLIVSGGD--D-----GCIHVWDLRRFKK-----GSSVATFK-HHTAPVTTV 417 (812)
Q Consensus 355 ~~~~~~---~~~~~~~~v~~l~~~~~-~~~l~sg~~--d-----g~i~iwd~~~~~~-----~~~~~~~~-~h~~~v~~v 417 (812)
...+.. .+ .....-.++.+... +.+++.||. + ..+.+||+....- ...+.... ........+
T Consensus 525 W~~~~~~g~~p-~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~ 603 (695)
T 2zwa_A 525 FKDVTPKDEFF-QNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIK 603 (695)
T ss_dssp EEECCCSSGGG-GSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEE
T ss_pred eEEccCCCCCC-CcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEE
Confidence 111111 11 11122233555555 567777776 2 3588999875321 11122211 111112222
Q ss_pred EEccCCCcEEEEEECC--------CCEEEEEcCCC
Q psy4510 418 EWHPTESSTFASGGAD--------DQIALWDLAVE 444 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~d--------g~v~iwd~~~~ 444 (812)
...++ .+++.||.+ ..|.+||+.+.
T Consensus 604 -~~~~~-~iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 604 -YITPR-KLLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp -EEETT-EEEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred -EeCCC-EEEEECCccCCCCCCCCCeEEEEECCCC
Confidence 33323 577777743 45788888765
No 350
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=72.11 E-value=77 Score=31.02 Aligned_cols=179 Identities=13% Similarity=0.135 Sum_probs=80.1
Q ss_pred CCCeEEEecC----CC-------cEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCC-------CceEE
Q psy4510 188 EPGVLATGDC----KR-------NIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDP-------FQLAE 249 (812)
Q Consensus 188 ~~~~lat~~~----dg-------~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d-------~~i~v 249 (812)
++.+++.||. ++ .+.+||..+..-.. ...+......-.++.+ +++.++.|+.+ ..+.+
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~--~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~ 131 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVG--LPPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLDSVLC 131 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEEEE--CSCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcEEE--CCCCCccccccceEEE--CCEEEEEcCccCCCCcccceEEE
Confidence 7788888873 12 16677776543211 1112111111112222 56666666643 23677
Q ss_pred eeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeC------CCcEEEEeCCCCCcceeccccccCCCCCEE
Q psy4510 250 HNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDC------KRNIHIWTPREAGAWQVDQKPLVGHTNSVE 323 (812)
Q Consensus 250 wd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~------dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~ 323 (812)
||..+..-......|.. ..+| +++. .++ .+++.|+. -..+.+||+.+. .|.... .+........
T Consensus 132 yd~~~~~W~~~~~~p~~-r~~~-----~~~~-~~~-~iyv~GG~~~~~~~~~~~~~yd~~~~-~W~~~~-~~p~~r~~~~ 201 (318)
T 2woz_A 132 YDPVAAKWSEVKNLPIK-VYGH-----NVIS-HNG-MIYCLGGKTDDKKCTNRVFIYNPKKG-DWKDLA-PMKTPRSMFG 201 (318)
T ss_dssp EETTTTEEEEECCCSSC-EESC-----EEEE-ETT-EEEEECCEESSSCBCCCEEEEETTTT-EEEEEC-CCSSCCBSCE
T ss_pred EeCCCCCEeECCCCCCc-cccc-----EEEE-ECC-EEEEEcCCCCCCCccceEEEEcCCCC-EEEECC-CCCCCcccce
Confidence 77766411000001111 1122 2222 233 56666654 245899998875 344321 2221111112
Q ss_pred EEEEcCCCCeEEEEEECC-----CeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCC
Q psy4510 324 DLQWSPGEKRVLASCSVD-----LSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDD 387 (812)
Q Consensus 324 ~~~~~p~~~~~l~s~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~d 387 (812)
.+.+ ++. +++.|+.+ ..+.+||+.+.. ...+..++. ......++.+ ++.+++.|+.+
T Consensus 202 ~~~~--~~~-iyv~GG~~~~~~~~~~~~yd~~~~~-W~~~~~~p~-~r~~~~~~~~--~~~i~v~GG~~ 263 (318)
T 2woz_A 202 VAIH--KGK-IVIAGGVTEDGLSASVEAFDLKTNK-WEVMTEFPQ-ERSSISLVSL--AGSLYAIGGFA 263 (318)
T ss_dssp EEEE--TTE-EEEEEEEETTEEEEEEEEEETTTCC-EEECCCCSS-CCBSCEEEEE--TTEEEEECCBC
T ss_pred EEEE--CCE-EEEEcCcCCCCccceEEEEECCCCe-EEECCCCCC-cccceEEEEE--CCEEEEECCee
Confidence 2222 344 77777653 356788987532 222222211 1112222322 45677777754
No 351
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=71.53 E-value=1.4e+02 Score=33.87 Aligned_cols=158 Identities=11% Similarity=0.103 Sum_probs=78.2
Q ss_pred CCCeeeeeEcCCC-CcEEEeeCCCceEEeeCCCCCCCCCCCCCceEEcC----CCCcEEEEEecCCCCCEEEEEeCCCc-
Q psy4510 223 TNSAEDLQWSDLK-TALQTVDDPFQLAEHNKKRGKGPGIPTPPLFSFSG----HLTEGFAMDWSSTEPGVLATGDCKRN- 296 (812)
Q Consensus 223 ~~~V~~l~~s~~~-~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~----h~~~v~~l~~sp~~~~~l~sg~~dg~- 296 (812)
...|.+|+++|.. ..+.++...+.|...+-... ..+++....+ ....+.+|++.|..+..+..+.....
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~DgG~-----tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~ 88 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWDAGTS-----KWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVG 88 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEETTTT-----EEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTT
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEecCCCC-----CeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCC
Confidence 4589999999864 45566666666554432211 1111111000 12468999999865455555543211
Q ss_pred ---EEEEeC-CCCCcceeccccccC-----CCCCEEEEEEcCCCCeEEEEEECCCeEEEEECC-CCCcccceeecCC--c
Q psy4510 297 ---IHIWTP-REAGAWQVDQKPLVG-----HTNSVEDLQWSPGEKRVLASCSVDLSIRIWDTR-VINTKSCMLTLPN--A 364 (812)
Q Consensus 297 ---i~vwd~-~~~~~~~~~~~~~~~-----h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~-~~~~~~~~~~~~~--~ 364 (812)
-.||.- ..+..|......+.. ....+..++++|.....+..+...+. ||-.. .+.+-..+..... .
T Consensus 89 ~~~~~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~DgG~TW~~~~~~~~~~~ 166 (789)
T 1sqj_A 89 DEWAAFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSDRAKTWTNVTSIPDAFT 166 (789)
T ss_dssp SSCCEEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESSTTSSCEEETTSCCCCS
T ss_pred CcccEEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECCCCcccCCCccCccccC
Confidence 344443 344445443222111 11135678888876555666653443 33322 2222222221110 1
Q ss_pred CCCCeEEEEEcCCC-CEEEEEeCC
Q psy4510 365 HTSDVNVISWNRTE-PLIVSGGDD 387 (812)
Q Consensus 365 ~~~~v~~l~~~~~~-~~l~sg~~d 387 (812)
....+..+.++|.. ..++.+..+
T Consensus 167 ~~~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 167 NGIGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TTTCEEEEEECTTSTTCEEEEESS
T ss_pred CCCCeEEEEECCCCCCEEEEEEcC
Confidence 12568889998854 355555544
No 352
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=70.55 E-value=79 Score=30.51 Aligned_cols=223 Identities=12% Similarity=0.134 Sum_probs=117.3
Q ss_pred ceEEEEeCCCCCCeEEEecCCCcEEEEccCCCCcccccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCC
Q psy4510 178 EGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKG 257 (812)
Q Consensus 178 ~i~~~~~sp~~~~~lat~~~dg~v~iwd~~~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~ 257 (812)
.|..++... . ..++. . ||.|..|-.........+.. ....|..++....-. +... +|.+..|-......
T Consensus 25 ~i~~ia~G~-~-h~~~l-~-~G~v~~wG~n~~Gqlg~p~~----~~~~i~~ia~G~~hs--~~l~-~G~v~~wG~n~~Gq 93 (282)
T 3qhy_B 25 GVDAIAGGY-F-HGLAL-K-GGKVLGWGANLNGQLTMPAA----TQSGVDAIAAGNYHS--LALK-DGEVIAWGGNEDGQ 93 (282)
T ss_dssp SCCEEEECS-S-EEEEE-E-TTEEEEEECCSSSTTSCCGG----GGSCCCEEEECSSEE--EEEE-TTEEEEEECCTTST
T ss_pred CCcEEEeCC-C-eEEEE-E-CCEEEEEeCCCCCCCCCCcc----CCCCEEEEEeCCCEE--EEEE-CCEEEEeeCCCCCC
Confidence 355555433 2 23333 3 89999996655442211111 123566666654433 2234 89999997654311
Q ss_pred CCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCCCCCEEEEEEcCCCCeEEEE
Q psy4510 258 PGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGHTNSVEDLQWSPGEKRVLAS 337 (812)
Q Consensus 258 ~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s 337 (812)
.. .|... ...|..++..... .++. . +|.|..|-......... + ......|..++...... ++.
T Consensus 94 lg---~P~~~----~~~v~~ia~G~~h--s~al-~-~G~v~~wG~n~~gqlg~---~-~~~~~~i~~i~~G~~~~--~~l 156 (282)
T 3qhy_B 94 TT---VPAEA----RSGVDAIAAGAWA--SYAL-K-DGKVIAWGDDSDGQTTV---P-AEAQSGVTALDGGVYTA--LAV 156 (282)
T ss_dssp TC---CCGGG----SSSEEEEEEETTE--EEEE-E-TTEEEEEECCTTSTTSC---C-GGGGSSEEEEEECSSEE--EEE
T ss_pred CC---CCccc----CCCeEEEECcCCE--EEEE-e-CCeEEEecCCCCCcCCC---C-ccCCCCeEEEEcccCEE--EEE
Confidence 11 12111 2467777766542 3333 3 89999998766542111 1 11234577777655432 333
Q ss_pred EECCCeEEEEECCCCCcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCCCceEEcccCCCCEEEE
Q psy4510 338 CSVDLSIRIWDTRVINTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKHHTAPVTTV 417 (812)
Q Consensus 338 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~h~~~v~~v 417 (812)
. ||.|..|-........ .+..-...|..|+..... .++. .+|.|..|=.... ++.- .-......|..|
T Consensus 157 -~-~G~v~~wG~n~~gqlg----~p~~~~~~v~~i~~G~~h-s~al--~~G~v~~wG~n~~--gqlg-~p~~~~~~v~~i 224 (282)
T 3qhy_B 157 -K-NGGVIAWGDNYFGQTT----VPAEAQSGVDDVAGGIFH-SLAL--KDGKVIAWGDNRY--KQTT-VPTEALSGVSAI 224 (282)
T ss_dssp -E-TTEEEEEECCTTSTTS----CCGGGGSSEEEEEECSSE-EEEE--ETTEEEEEECCTT--STTC-CCGGGGSSCCEE
T ss_pred -E-CCEEEEecCCCCCCCC----CceecCCCeEEEEecCCE-EEEE--ECCeEEEEECCCC--CCCC-CCcccCCCceEE
Confidence 3 7999999876422211 111223567777765433 3333 5999999976542 1111 111112357777
Q ss_pred EEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 418 EWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 418 ~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+-... ..++.. ||.|..|-....
T Consensus 225 ~~G~~--h~~al~--~g~v~~wG~n~~ 247 (282)
T 3qhy_B 225 ASGEW--YSLALK--NGKVIAWGSSRT 247 (282)
T ss_dssp EECSS--CEEEEE--TTEEEEESTTCC
T ss_pred EcCCC--EEEEEE--CCEEEEecCCCC
Confidence 76543 344444 899999976654
No 353
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=67.80 E-value=1.6e+02 Score=32.93 Aligned_cols=242 Identities=10% Similarity=0.022 Sum_probs=119.9
Q ss_pred eCCCCCCeEEEe-----cCCCcEEEEccCCCCcccccccccC--CCC-----CCeeeeeEcCCCCcEEEe----------
Q psy4510 184 WSSTEPGVLATG-----DCKRNIHIWTPREAGAWQVDQKPLG--GHT-----NSAEDLQWSDLKTALQTV---------- 241 (812)
Q Consensus 184 ~sp~~~~~lat~-----~~dg~v~iwd~~~~~~~~~~~~~l~--~h~-----~~V~~l~~s~~~~~l~s~---------- 241 (812)
++| ++++++.+ +.-..|+++|+.+++... -.+. ... .....++|.++...+++.
T Consensus 137 ~~~-~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~---~~~~~~~k~~~~~~~~~~~~~W~d~~~~~~~~~~~~~~~~~~ 212 (711)
T 4hvt_A 137 CFQ-NPNRYLISMSFGGKDEMFFREWDLEKKDFVK---NGFEPITNSGKLLEGKFTYPTWINKDTIIFNLVLHKNEITSS 212 (711)
T ss_dssp CSS-STTEEEEEEEETTCSEEEEEEEETTTTEECT---TCSCCBCTTCCBCCEETCCEEEEETTEEEECCCCSTTCBCTT
T ss_pred cCC-CCCEEEEEeCCCCCceeEEEEEECCcCCcCC---CCcccccccccccccccceeeEECCCEEEEEeCCCCCCcCcC
Confidence 788 88887754 333468999998876321 1111 000 012344776444444432
Q ss_pred eCCCceEEeeCCCCCCCCCCCCCceEEcCCCCc-EEEEEecCCCCC----EEEEEeCC---CcEEEEeCCCCCcceeccc
Q psy4510 242 DDPFQLAEHNKKRGKGPGIPTPPLFSFSGHLTE-GFAMDWSSTEPG----VLATGDCK---RNIHIWTPREAGAWQVDQK 313 (812)
Q Consensus 242 ~~d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~-v~~l~~sp~~~~----~l~sg~~d---g~i~vwd~~~~~~~~~~~~ 313 (812)
+....++.|.+-+. ...-...+.+.... ..+...++++.. .+++.+.+ ..+.+.+....... ..
T Consensus 213 ~~~~~v~~~~~Gt~-----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~ 284 (711)
T 4hvt_A 213 LYPNSLYIWKRGES-----IEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK---LQ 284 (711)
T ss_dssp SSBCEEEEEETTSC-----GGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE---EE
T ss_pred CCCCEEEEEECCCC-----hHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc---ce
Confidence 12345777777653 11223344443333 334555666643 34444322 34556665532211 11
Q ss_pred cccCCCCCEEEEEEcCCCCeEEEEE----------ECCCeEEEEECCCCCc----ccceee-cCCcCCCCeEEEEEcCCC
Q psy4510 314 PLVGHTNSVEDLQWSPGEKRVLASC----------SVDLSIRIWDTRVINT----KSCMLT-LPNAHTSDVNVISWNRTE 378 (812)
Q Consensus 314 ~~~~h~~~v~~~~~~p~~~~~l~s~----------~~dg~i~iwd~~~~~~----~~~~~~-~~~~~~~~v~~l~~~~~~ 378 (812)
.+.-... ..+..+..+. +++.. ...+.|...++..... ...... +.......+..+.|..+
T Consensus 285 ~l~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~- 360 (711)
T 4hvt_A 285 KINMPSD--ATLQGSFKEY-VFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD- 360 (711)
T ss_dssp ECCSCTT--CEEEEEETTE-EEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-
T ss_pred EeecCCc--ceEeeeECCE-EEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-
Confidence 1111111 1123344554 44422 2467899999875321 111122 22334456788888865
Q ss_pred CEEEEEeCCCc--EEEEecCCCC-CCCceEEcccCCCCEEEEEEccCCCcEEEEEEC---CCCEEEEEcC
Q psy4510 379 PLIVSGGDDGC--IHVWDLRRFK-KGSSVATFKHHTAPVTTVEWHPTESSTFASGGA---DDQIALWDLA 442 (812)
Q Consensus 379 ~~l~sg~~dg~--i~iwd~~~~~-~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~---dg~v~iwd~~ 442 (812)
.++++...++. |.++++.... ....+..+.. .+.+..+...+++..++++.+. -+.+..+|+.
T Consensus 361 ~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~lp~-~~~~~~~~~~~~~~~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 361 RVFLATYDNVVAKVVTFTLENEQWTKPVVLKLPY-QNAIFGMSSYEEEEEALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp CEEEEEEETTEEEEEEECEETTEECCCEEECCCS-TTCEEEEECCTTCSCEEEEEECSSSCCEEEEECTT
T ss_pred EEEEEEEECCEEEEEEEECCCCceEEEeccCCCC-CeEEEEEeecCcCCEEEEEEecCCCCCEEEEEeCC
Confidence 57777777765 5666664210 0111122222 3457777777777667766654 2456777765
No 354
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=58.07 E-value=35 Score=36.45 Aligned_cols=89 Identities=8% Similarity=-0.029 Sum_probs=57.5
Q ss_pred ecccceEEEEEEeccCCeEEEEeecCcceEEEEeccccccccCCcccccccccccCCCCCCCCCC-eeeecCCCCceEEE
Q psy4510 584 IRHRGCINRVRTCQYGSTTLAGVWGEVGKVGIWDLKTALQTVDDPFQLAEHNKKRGKGPGIPTPP-LFSFSGHLTEGFAM 662 (812)
Q Consensus 584 ~~h~~~v~~l~~s~~g~~l~~~~~~~dg~I~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~gh~~~V~~l 662 (812)
.+-......+.++|||++++++ +--+.+|.++++......+...... +... ..... -.......
T Consensus 319 iP~pksPHGv~vsPDGkyi~v~-GKLsptvtV~d~~k~~~~~~~k~~~-------------~~~~~~ae~e-~GlGPlHt 383 (638)
T 3sbq_A 319 VPVPKNPHGCNTSSDGKYFIAA-GKLSPTCSMIAIDKLPDLFAGKLAD-------------PRDVIVGEPE-LGLGPLHT 383 (638)
T ss_dssp EEESSSCCCEEECTTSCEEEEE-CTTSSBEEEEEGGGHHHHHTTCCSC-------------GGGGEEECCB-CCSCEEEE
T ss_pred EeCCCCCcceeeCCCCCEEEEc-CCCCCeEEEEEeehhhhhhhccccC-------------cccceEeecc-CCCcccEE
Confidence 3444456678899999999886 3568899999998654322111000 0001 11111 23367788
Q ss_pred EeCCCCCCeEEecCCCceEEEEecCC
Q psy4510 663 DWSSTEPGVLATGDCKRNIHIWTPRE 688 (812)
Q Consensus 663 ~~sp~~~~~las~s~Dg~v~iWd~~~ 688 (812)
+|.+ +|....|--.|..|..|++..
T Consensus 384 ~Fd~-~G~aYTtlfidSqvvkWni~~ 408 (638)
T 3sbq_A 384 TFDG-RGNAYTTLFIDSQVVKWNMEE 408 (638)
T ss_dssp EECS-SSEEEEEETTTTEEEEEEHHH
T ss_pred EECC-CCceEeeeeecceEEEEeccH
Confidence 9999 676667777999999999986
No 355
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=57.73 E-value=1.5e+02 Score=29.28 Aligned_cols=249 Identities=6% Similarity=-0.083 Sum_probs=128.8
Q ss_pred CeEEEecCCCcEEEEccCCCCccc----ccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceE---EeeCCCCCCCCCCC
Q psy4510 190 GVLATGDCKRNIHIWTPREAGAWQ----VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLA---EHNKKRGKGPGIPT 262 (812)
Q Consensus 190 ~~lat~~~dg~v~iwd~~~~~~~~----~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~---vwd~~~~~~~~~~~ 262 (812)
..+++-+.+|.|+--.+.+..... -....-....+.+..+........|+.-+..|.+. +|++.... .....
T Consensus 4 ~v~v~ls~~GyiKr~~~~~y~~~~rgg~g~~~~~~ke~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~-r~~~G 82 (327)
T 3uc1_A 4 DVVVTITETGYAKRTKTDLYRSQKRGGKGVQGAGLKQDDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEAS-RTARG 82 (327)
T ss_dssp EEEEEEETTSEEEEEEHHHHHHHC--------CCCCGGGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCC-SSSCC
T ss_pred cEEEEEeCCCEEEEeeHHHhhhcccCCCCccccccCCCCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCC-ccCCC
Confidence 456667778888765432211000 00000111234455555555556666666666644 34444321 00012
Q ss_pred CCceE---EcCCCCcEEEE-EecC--CCCCEEEEEeCCCcEEEEeCCCCCcc---eeccccccCCCCCEEEEEEcCCCCe
Q psy4510 263 PPLFS---FSGHLTEGFAM-DWSS--TEPGVLATGDCKRNIHIWTPREAGAW---QVDQKPLVGHTNSVEDLQWSPGEKR 333 (812)
Q Consensus 263 ~~~~~---~~~h~~~v~~l-~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~~---~~~~~~~~~h~~~v~~~~~~p~~~~ 333 (812)
.++.. +. ....|.++ .... +. ..++..+..|.|+--.+..-... ......+.. .+.+..+........
T Consensus 83 ~~i~~~l~l~-~~e~i~~~~~~~~~~~e-~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ 159 (327)
T 3uc1_A 83 QHVANLLAFQ-PEERIAQVIQIRGYTDA-PYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDD 159 (327)
T ss_dssp EEHHHHTTCC-TTCCEEEEEEESSTTSS-SEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCE
T ss_pred EEHHHccCCC-CCCEEEEEEEeccCCCC-CEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCE
Confidence 22211 22 23445544 3432 23 68999999999999876543210 111223333 344555555445553
Q ss_pred EEEEEECCCeEEEEECC--CCCc-c---cceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCCCCC----Cc
Q psy4510 334 VLASCSVDLSIRIWDTR--VINT-K---SCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRFKKG----SS 403 (812)
Q Consensus 334 ~l~s~~~dg~i~iwd~~--~~~~-~---~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~~~~----~~ 403 (812)
++..+..|.+..+.+. .... . .-+..+.-.....|.++...+.+..++..+..|.++.-.+..+... .-
T Consensus 160 -ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G 238 (327)
T 3uc1_A 160 -LLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKG 238 (327)
T ss_dssp -EEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCC
T ss_pred -EEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCc
Confidence 7777888998888766 2111 0 1111121233456777766666678899999999999887643321 22
Q ss_pred eEEccc--CCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCCC
Q psy4510 404 VATFKH--HTAPVTTVEWHPTESSTFASGGADDQIALWDLAVE 444 (812)
Q Consensus 404 ~~~~~~--h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~~ 444 (812)
+..++- -.+.+..+.....+ ..++..+.+|.+..+.....
T Consensus 239 ~~~~~l~~~~d~lv~~~~~~~~-~~i~l~T~~G~~ir~~~~~i 280 (327)
T 3uc1_A 239 VLTVMYDRRRGRLVGALIVDDD-SELYAVTSGGGVIRTAARQV 280 (327)
T ss_dssp EESSCCCTTTCSEEEEEEECTT-CEEEEEEGGGCEEEEEGGGS
T ss_pred EEEEEecCCCCeEEEEEEeCCC-ccEEEEcCCCeEEEEehhhc
Confidence 333322 13445555444332 35666677888877776543
No 356
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=49.99 E-value=2.2e+02 Score=28.75 Aligned_cols=250 Identities=7% Similarity=-0.028 Sum_probs=126.4
Q ss_pred CCCeEEEecCCCcEEEEccCCCCccc-----ccccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEe---eCCCCCCCC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQ-----VDQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEH---NKKRGKGPG 259 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~-----~~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vw---d~~~~~~~~ 259 (812)
+...+++.+.+|.|+--.+....... .....+ ...+.+..+........|+..+..|.+.-. ++.... ..
T Consensus 6 ~e~~~v~lT~~GyIKr~~l~~y~~~~r~g~g~~~~~l-ke~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~-r~ 83 (370)
T 3l6v_A 6 PEDVVVTLSHAGYAKRQPVSAYRAQRRGGRGRSAAST-KEEDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAG-SN 83 (370)
T ss_dssp CCCEEEEEESSCEEEEEEHHHHHHTCCCCCCSEEEEC-SCCCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCC-TT
T ss_pred CCCEEEEEeCCCEEEEeeHHHhhhhccCCCCceeccc-CCCCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCC-cc
Confidence 66788889999999875433211000 011112 224455555555666667777777765444 443220 00
Q ss_pred CCCCCce---EEcCCCCcEEEEEecC--CCCCEEEEEeCCCcEEEEeCCCCCc---ceeccccccCCCCCEEEEEEcCCC
Q psy4510 260 IPTPPLF---SFSGHLTEGFAMDWSS--TEPGVLATGDCKRNIHIWTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGE 331 (812)
Q Consensus 260 ~~~~~~~---~~~~h~~~v~~l~~sp--~~~~~l~sg~~dg~i~vwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~ 331 (812)
....++. .+. ....|.++..-. .....|+.++..|.++...+..-.. .......+.. .+.+-.+......
T Consensus 84 a~G~~i~~ll~L~-~~e~Iv~~~~~~~~~~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~-~d~lv~v~~~~~~ 161 (370)
T 3l6v_A 84 ARGRPIINWIPLE-SGERVQAVLPVREYADNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDE-GDALVGVALTDGD 161 (370)
T ss_dssp SCCEEGGGSCCCC-TTCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCT-TCCEEEEEEECSC
T ss_pred cCCcCHhhccCCC-CCCEEEEEEEeccCCCCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCC-CCEEEEEEEeCCC
Confidence 0112221 222 234555544322 1225899999999999987643221 1111223333 3445555544444
Q ss_pred CeEEEEEECCCeEEEEECCCCCc----ccceeecCCcCCCCeEEEEEcC-------------------------------
Q psy4510 332 KRVLASCSVDLSIRIWDTRVINT----KSCMLTLPNAHTSDVNVISWNR------------------------------- 376 (812)
Q Consensus 332 ~~~l~s~~~dg~i~iwd~~~~~~----~~~~~~~~~~~~~~v~~l~~~~------------------------------- 376 (812)
. -++..+..|.+..+....-.. ..-+..+.-.....|.++...+
T Consensus 162 ~-~i~l~T~~G~~irf~~~~v~~~gR~a~GV~~i~L~~~d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~t~~g~~~~~~~~ 240 (370)
T 3l6v_A 162 R-DVLLFASNGKTVRFGESTVRSMGRTATGVRGIRLAKGEEVVSLIVSERAGGVEDEVEDESAEEVVETTDGAEPAVIDV 240 (370)
T ss_dssp C-EEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTTCCEEEEEEECCC-----------------------------
T ss_pred c-eEEEEeCCCeEEEEEccccCccCCCCCCeeeEEeCCCCEEEEEEEecccccccccccccccccccccccccccccccc
Confidence 4 477778889888887542110 0111112112334555554443
Q ss_pred ----CCCEEEEEeCCCcEEEEecCCCCC----CCceEEcc--cCCCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 377 ----TEPLIVSGGDDGCIHVWDLRRFKK----GSSVATFK--HHTAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 377 ----~~~~l~sg~~dg~i~iwd~~~~~~----~~~~~~~~--~h~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
.+..+++.+..|..+...+..+.. ++-+..++ ...+.+..+.+...+ ..++..+..|.+.-..+..
T Consensus 241 ~~~~~~~~il~vTe~G~gKrt~~~e~~~~~Rg~kGv~~~k~~~~~g~lv~~~~v~~~-d~i~liT~~G~~iR~~v~~ 316 (370)
T 3l6v_A 241 ADNGDVAYILTATENGYGKRTPLAEYPRKGRGTQGVIGIQTTERNGKLVRAVLLGST-DEVMLISDGGTLVRTRGSE 316 (370)
T ss_dssp ------CEEEEEETTSEEEEEEGGGSCCBCTTSCCEESSCCCTTTCSEEEEEEECTT-CEEEEEETTCCEEEEEGGG
T ss_pred ccccCCceEEEeeCCCCEEEEEHHHhcccccCCcceEEEEecCCCCcEEEEEEeCCC-ceEEEEcCCCeEEEeeHhh
Confidence 345888999999999988764322 12222222 223455554443332 2455556667766665543
No 357
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=46.11 E-value=50 Score=35.36 Aligned_cols=76 Identities=7% Similarity=0.029 Sum_probs=54.0
Q ss_pred CEEEEEEcCCCCeEEEEEECCCeEEEEECCCCC---------cccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEE
Q psy4510 321 SVEDLQWSPGEKRVLASCSVDLSIRIWDTRVIN---------TKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIH 391 (812)
Q Consensus 321 ~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~---------~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~ 391 (812)
....+..+|+|+++++++-.+.++.++|++... ...++... ..-.-...-.+|.++|+...+-.-|..|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae-~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGE-PELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEEC-CBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEee-ccCCCcccEEEECCCCceEeeeeecceEE
Confidence 345678999999988888889999999987311 11112211 12244567789999996666667899999
Q ss_pred EEecCC
Q psy4510 392 VWDLRR 397 (812)
Q Consensus 392 iwd~~~ 397 (812)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999963
No 358
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=43.82 E-value=36 Score=34.01 Aligned_cols=116 Identities=16% Similarity=0.186 Sum_probs=62.9
Q ss_pred CEEEEEeCCCcEEEEeCCCCCc-ceeccccccCCCCCEEEEEE--cCCCCeEEEEE-ECCCeEEEEECCCCCcccceeec
Q psy4510 286 GVLATGDCKRNIHIWTPREAGA-WQVDQKPLVGHTNSVEDLQW--SPGEKRVLASC-SVDLSIRIWDTRVINTKSCMLTL 361 (812)
Q Consensus 286 ~~l~sg~~dg~i~vwd~~~~~~-~~~~~~~~~~h~~~v~~~~~--~p~~~~~l~s~-~~dg~i~iwd~~~~~~~~~~~~~ 361 (812)
++++.++.||.|+-.|..+++. |..... .....+. ..- .+.+..+++.. +.||.|..++..++..... ...
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~---~~~p~~~-~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~-~~~ 85 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE---NFQPLIE-IQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLP-LSI 85 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG---GSCCSEE-CCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEE-EEH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC---ccCCcEE-ecCCccccCCcEEEEEECCCCEEEEEECCCCcEEee-ecc
Confidence 5788999999999999888763 332211 0011111 100 01222334443 5789999998775422111 111
Q ss_pred C-CcCCCCeEE---EEE-----cCCCCEEEEEeCCCcEEEEecCCCCCCCceEEccc
Q psy4510 362 P-NAHTSDVNV---ISW-----NRTEPLIVSGGDDGCIHVWDLRRFKKGSSVATFKH 409 (812)
Q Consensus 362 ~-~~~~~~v~~---l~~-----~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~ 409 (812)
+ .....++.. ... ...+..+++|+.+|.+...|++ +++.+..+..
T Consensus 86 ~~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~---tG~~~W~~~~ 139 (339)
T 2be1_A 86 RQLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINML---NGEIISAFGP 139 (339)
T ss_dssp HHHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETT---TCCEEEEEST
T ss_pred ccceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECC---CCcEEEEEec
Confidence 0 011122221 000 0034478999999999999998 5777777753
No 359
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=43.43 E-value=68 Score=31.97 Aligned_cols=24 Identities=8% Similarity=-0.067 Sum_probs=20.4
Q ss_pred CCCEEEeecCCCeEEEeecCCCCC
Q psy4510 700 RFGVLATGDCKRNIHIWTPREAGA 723 (812)
Q Consensus 700 dg~~lasgs~dg~i~iwd~~~~~~ 723 (812)
.+..+.+|+.+|++...|+.+|+.
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~ 133 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEI 133 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCE
T ss_pred cCCEEEEEecCCEEEEEECCCCcE
Confidence 566888999999999999988874
No 360
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.92 E-value=4.7e+02 Score=30.35 Aligned_cols=32 Identities=9% Similarity=0.093 Sum_probs=28.2
Q ss_pred CCeeeeeEcCCCCcEEEeeCCCceEEeeCCCC
Q psy4510 224 NSAEDLQWSDLKTALQTVDDPFQLAEHNKKRG 255 (812)
Q Consensus 224 ~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~ 255 (812)
..|.+++..++..++.+.+.|+.+|+|++.++
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~ 267 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTN 267 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTT
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCC
Confidence 35678888889999999999999999999886
No 361
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=41.64 E-value=93 Score=36.31 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=28.1
Q ss_pred ceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 737 SVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 737 ~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.|.+++..++.. +|+|-+.|+++|||++.++.
T Consensus 237 ~~~~~~~~~~~~-~lftl~~D~~LRiWsl~t~~ 268 (950)
T 4gq2_M 237 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQ 268 (950)
T ss_dssp CEEEEEEETTTT-EEEEEETTCEEEEEETTTTE
T ss_pred eEEEEeecCCCc-EEEEEECCCEEEEEECCCCC
Confidence 567788888888 89999999999999988876
No 362
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=37.83 E-value=52 Score=35.76 Aligned_cols=18 Identities=22% Similarity=0.506 Sum_probs=14.6
Q ss_pred cceeEeEEecCCceeEEe
Q psy4510 736 NSVEDLQWSPGEKRVLAS 753 (812)
Q Consensus 736 ~~V~~l~fs~dg~~~L~s 753 (812)
..++.++|+||++++++.
T Consensus 531 aE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 531 CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEEECTTSSEEEEE
T ss_pred ccCcCeeECCCCCEEEEE
Confidence 589999999999954444
No 363
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=36.94 E-value=3.4e+02 Score=27.36 Aligned_cols=124 Identities=7% Similarity=0.153 Sum_probs=70.0
Q ss_pred CcEEEEEec---CC---CCCEEEEEe-CCCcEEEEeCCCCCcceeccccccCC--------------CCCEEEEEEcCC-
Q psy4510 273 TEGFAMDWS---ST---EPGVLATGD-CKRNIHIWTPREAGAWQVDQKPLVGH--------------TNSVEDLQWSPG- 330 (812)
Q Consensus 273 ~~v~~l~~s---p~---~~~~l~sg~-~dg~i~vwd~~~~~~~~~~~~~~~~h--------------~~~v~~~~~~p~- 330 (812)
..+..+++. |. +..++...+ ..+.|.|+|+.+++.|.+....+... ...|..|+.+|+
T Consensus 152 S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~ 231 (381)
T 3q6k_A 152 TYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRD 231 (381)
T ss_dssp GGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCC
T ss_pred CccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCc
Confidence 456677766 22 124444444 46789999999998877653332221 246888999998
Q ss_pred ---CCeEEEEEECCCeEEEEE---CCCCCcccceeecC-CcCCCCeEEEEEc-CCCCEEEEEeCCCcEEEEecC
Q psy4510 331 ---EKRVLASCSVDLSIRIWD---TRVINTKSCMLTLP-NAHTSDVNVISWN-RTEPLIVSGGDDGCIHVWDLR 396 (812)
Q Consensus 331 ---~~~~l~s~~~dg~i~iwd---~~~~~~~~~~~~~~-~~~~~~v~~l~~~-~~~~~l~sg~~dg~i~iwd~~ 396 (812)
++.+....-....+.--. ++.......+..+- .+....-..++.. .+|.++++--....|..|+..
T Consensus 232 ~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~ 305 (381)
T 3q6k_A 232 SEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQ 305 (381)
T ss_dssp TTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETT
T ss_pred CCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCC
Confidence 665444443333333333 12211112222220 1111344456675 677777777788899999986
No 364
>1sqj_A OXG-RCBH, oligoxyloglucan reducing-END-specific cellobiohydrolase; beta-propeller; 2.20A {Geotrichum SP} SCOP: b.69.13.1 b.69.13.1 PDB: 2ebs_A*
Probab=36.16 E-value=5.2e+02 Score=29.18 Aligned_cols=157 Identities=9% Similarity=0.075 Sum_probs=81.1
Q ss_pred CCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccC---CCCCEEEEEEcCCCCeEEEEEECCCe----E
Q psy4510 272 LTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVG---HTNSVEDLQWSPGEKRVLASCSVDLS----I 344 (812)
Q Consensus 272 ~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~~l~s~~~dg~----i 344 (812)
.+.|.+|+++|..+..+..+...+.|...+ ..+..|......... ....|.+|++.|.....+..+..... -
T Consensus 14 ~g~i~~i~~~p~~~~~~~a~~~~ggv~rS~-DgG~tW~~~~~~~~~~~~~~~~i~~ia~dp~~~~~i~~~~g~~~~~~~~ 92 (789)
T 1sqj_A 14 GGYITGIVAHPKTKDLLYARTDIGGAYRWD-AGTSKWIPLNDFIEAQDMNIMGTESIALDPNNPDRLYLAQGRYVGDEWA 92 (789)
T ss_dssp CSCEEEEEECSSSTTCEEEEESSSCEEEEE-TTTTEEEESCTTCCGGGGGGCSEEEEEEETTEEEEEEEEECSCTTSSCC
T ss_pred CCcEEEEEECCCCCCEEEEEecCCCEEEec-CCCCCeeECccCCCcccccCCceeEEEECCCCCCEEEEEeCccCCCccc
Confidence 468999999998777888888777765554 334445442221110 13469999999965444544443211 2
Q ss_pred EEEECC-CCCcccceee-cCC----cCCCCeEEEEEcCCC-CEEEEEeCCCcEEEEecCCCCCCCceEEcc------cCC
Q psy4510 345 RIWDTR-VINTKSCMLT-LPN----AHTSDVNVISWNRTE-PLIVSGGDDGCIHVWDLRRFKKGSSVATFK------HHT 411 (812)
Q Consensus 345 ~iwd~~-~~~~~~~~~~-~~~----~~~~~v~~l~~~~~~-~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~------~h~ 411 (812)
.||-.. .+.+-..+.. +.. .....+..++++|.. ..++.+...+. ||-... .++.-..+. ...
T Consensus 93 ~v~~S~DgG~TW~~~~~~~~~~~~~~~~~~~~~iav~p~~~~~v~~g~~~~g--l~~S~D--gG~TW~~~~~~~~~~~~~ 168 (789)
T 1sqj_A 93 AFYVSEDRGQSFTIYESPFPMGANDMGRNNGERLAVNPFNSNEVWMGTRTEG--IWKSSD--RAKTWTNVTSIPDAFTNG 168 (789)
T ss_dssp EEEEESSTTSEEEEEECSSCCCTTSTTTTSCCCEEEETTEEEEEEEECSSSC--EEEESS--TTSSCEEETTSCCCCSTT
T ss_pred EEEEECCCCCcceeccCCcccCccCCCccceeEEEEcCCCCCEEEEEeccCC--EEEECC--CCcccCCCccCccccCCC
Confidence 333322 2222222211 000 011135667888754 36666664443 332222 122222221 112
Q ss_pred CCEEEEEEccCCCcEEEEEECC
Q psy4510 412 APVTTVEWHPTESSTFASGGAD 433 (812)
Q Consensus 412 ~~v~~v~~~p~~~~~l~s~~~d 433 (812)
..+..|.++|.++..++.+..+
T Consensus 169 ~~~~~i~~~p~~~~~~~~~~~~ 190 (789)
T 1sqj_A 169 IGYTSVIFDPERNGTIYASATA 190 (789)
T ss_dssp TCEEEEEECTTSTTCEEEEESS
T ss_pred CCeEEEEECCCCCCEEEEEEcC
Confidence 4688999998765566666654
No 365
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=35.95 E-value=3.2e+02 Score=26.65 Aligned_cols=207 Identities=11% Similarity=0.019 Sum_probs=110.4
Q ss_pred CCCeEEEecCCCcEEEEccCCCCcccc-----cccccCCCCCCeeeeeEcCCCCcEEEeeCCCceEEeeCCCCCCC--CC
Q psy4510 188 EPGVLATGDCKRNIHIWTPREAGAWQV-----DQKPLGGHTNSAEDLQWSDLKTALQTVDDPFQLAEHNKKRGKGP--GI 260 (812)
Q Consensus 188 ~~~~lat~~~dg~v~iwd~~~~~~~~~-----~~~~l~~h~~~V~~l~~s~~~~~l~s~~~d~~i~vwd~~~~~~~--~~ 260 (812)
+...+++.+.+|.|+--.+..-..... ....+. -.+.+..+........++..+..|.++-.....-... ..
T Consensus 7 ~e~~~v~~T~~G~iKr~~~~~~~~~~~~~~g~~~~~lk-e~D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~ 85 (312)
T 1suu_A 7 KENIVVMLTKKGFLKRLSQNEYKLQGTGGKGLSSFDLN-DGDEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRAS 85 (312)
T ss_dssp -CEEEEEEETTCBEEEEEGGGSCBCCSSCCCEECCCCC-TTCCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC-----
T ss_pred CCCEEEEEeCCCEEEEeEHHHhhccccCCCCceecccC-CCCEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccC
Confidence 556778888899999876654332110 011112 2234455555555667777788887665544321000 00
Q ss_pred CCCC---ceEEcCCCCcEEEEEecCC--CCCEEEEEeCCCcEEEEeCCCCCc---ceeccccccCCCCCEEEEEEcCCCC
Q psy4510 261 PTPP---LFSFSGHLTEGFAMDWSST--EPGVLATGDCKRNIHIWTPREAGA---WQVDQKPLVGHTNSVEDLQWSPGEK 332 (812)
Q Consensus 261 ~~~~---~~~~~~h~~~v~~l~~sp~--~~~~l~sg~~dg~i~vwd~~~~~~---~~~~~~~~~~h~~~v~~~~~~p~~~ 332 (812)
...+ ...+.. ...|.++...++ ....|+..+..|.++...+..-.. .......+.. .+.+..+.....+.
T Consensus 86 ~G~~i~~~l~l~~-~e~i~~~~~~~~~~~~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~-~d~lv~~~~~~~~~ 163 (312)
T 1suu_A 86 KGQNISELINLGD-QEEILTIKNSKDLTDDAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLND-KDFVTSAEIVFKDE 163 (312)
T ss_dssp --CBGGGTSCCCT-TCCEEEEEEESCCCTTCEEEEEETTSEEEEEEGGGGCC----CEECBCCCT-TCCEEEEEEECTTC
T ss_pred CCcChhhccCCCC-CCEEEEEEEeccCCCCCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCC-CCEEEEEEEeCCCC
Confidence 1111 122222 234544433321 225788888999999887643221 1112223443 45565555554444
Q ss_pred eEEEEEECCCeEEEEECCCC----CcccceeecCCcCCCCeEEEEEcCCCCEEEEEeCCCcEEEEecCCC
Q psy4510 333 RVLASCSVDLSIRIWDTRVI----NTKSCMLTLPNAHTSDVNVISWNRTEPLIVSGGDDGCIHVWDLRRF 398 (812)
Q Consensus 333 ~~l~s~~~dg~i~iwd~~~~----~~~~~~~~~~~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iwd~~~~ 398 (812)
-++..+.+|.+..+....- ....-+..+.-.....|..+.....+..+++.+..|..+...+...
T Consensus 164 -~i~l~T~~G~~~r~~~~ev~~~gR~~~Gv~~i~L~~~d~vv~~~~v~~~~~l~~vt~~G~~kr~~~~e~ 232 (312)
T 1suu_A 164 -KVICLSKKGSAFIFNSRDVRLTNRGTQGVCGMKLKEGDLFVKVLSVKENPYLLIVSENGYGKRLNMSKI 232 (312)
T ss_dssp -EEEEEETTSEEEEEEGGGSCBCCTTBCCEECCCCCTTCCEEEEEECTTCSEEEEEETTSEEEEEEGGGS
T ss_pred -EEEEEeCCCcEEEEEHHHccccCCCCCCeEeEEeCCCCEEEEEEEECCCCeEEEEECCCceEEEEHHHh
Confidence 4778888999998877531 1011122221122455666665555667888899999999988643
No 366
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=27.46 E-value=6.7e+02 Score=27.82 Aligned_cols=199 Identities=9% Similarity=0.028 Sum_probs=97.7
Q ss_pred EEEE-ecCCCCCEEEEEeCCC----cEEEEeCCCCCcceecccccc-CCCC------CEEEEEEcCCCCeEEEEEE----
Q psy4510 276 FAMD-WSSTEPGVLATGDCKR----NIHIWTPREAGAWQVDQKPLV-GHTN------SVEDLQWSPGEKRVLASCS---- 339 (812)
Q Consensus 276 ~~l~-~sp~~~~~l~sg~~dg----~i~vwd~~~~~~~~~~~~~~~-~h~~------~v~~~~~~p~~~~~l~s~~---- 339 (812)
..+. ++|++...+++-+..| .|+++|+.+++. ....+. .-+. ....++|..+ ..++++..
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~---~~~~~~~~~k~~~~~~~~~~~~~W~d~-~~~~~~~~~~~~ 207 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDF---VKNGFEPITNSGKLLEGKFTYPTWINK-DTIIFNLVLHKN 207 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEE---CTTCSCCBCTTCCBCCEETCCEEEEET-TEEEECCCCSTT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCc---CCCCcccccccccccccccceeeEECC-CEEEEEeCCCCC
Confidence 3455 8898855555555444 699999988752 111122 0000 1134578743 33455421
Q ss_pred ------CCCeEEEEECCCCCcccceeecCCcCCCC-eEEEEEcCCCC-----EEEEEeCC---CcEEEEecCCCCCCCce
Q psy4510 340 ------VDLSIRIWDTRVINTKSCMLTLPNAHTSD-VNVISWNRTEP-----LIVSGGDD---GCIHVWDLRRFKKGSSV 404 (812)
Q Consensus 340 ------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~-v~~l~~~~~~~-----~l~sg~~d---g~i~iwd~~~~~~~~~~ 404 (812)
....|+.|.+-+...... ..+ ...... -.+...++++. .+++.+.+ ..+.+.+... ....+
T Consensus 208 ~~~~~~~~~~v~~~~~Gt~~~~~~-~v~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~ 283 (711)
T 4hvt_A 208 EITSSLYPNSLYIWKRGESIEKAK-KLF-EVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKY--KNLKL 283 (711)
T ss_dssp CBCTTSSBCEEEEEETTSCGGGCE-EEE-ECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSS--SSCEE
T ss_pred CcCcCCCCCEEEEEECCCChHHCe-EEe-ccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCC--CCCcc
Confidence 235788998875432222 122 222222 23344566655 24444322 3456666543 11233
Q ss_pred EEcccCCCCEEEEEEccCCCcEEEEE----------ECCCCEEEEEcCCCCchhHHHhhhhhccCCCceEEeecCCCcee
Q psy4510 405 ATFKHHTAPVTTVEWHPTESSTFASG----------GADDQIALWDLAVERDSEIEQREAELKDLPSQLLFIHLGQKEIK 474 (812)
Q Consensus 405 ~~~~~h~~~v~~v~~~p~~~~~l~s~----------~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 474 (812)
..+...... .+..+..+ .+++.. ...+.|...++...... .......+.++.+.....+.
T Consensus 284 ~~l~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~l~ 353 (711)
T 4hvt_A 284 QKINMPSDA--TLQGSFKE-YVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKT-------ESDKTSLKILFTPTANEVFN 353 (711)
T ss_dssp EECCSCTTC--EEEEEETT-EEEEECSSCEEETTEEECTTCEEEEEGGGGGSC-------GGGCTTCEEEECCCTTEEEE
T ss_pred eEeecCCcc--eEeeeECC-EEEEEECcccccccccCCCCeEEEEECCccccc-------ccccccceEEECCCCCCeEE
Confidence 333322222 12334443 344422 13567888888754100 00000113345555556788
Q ss_pred EEEEcCCCCCEEEEEeCCCe
Q psy4510 475 ELHWHPQLPGTIISTANSGF 494 (812)
Q Consensus 475 ~~~~~p~~~~~~~~~~~~~~ 494 (812)
.+.|..+ .++++...++.
T Consensus 354 ~~~~~~~--~l~~~~~~~~~ 371 (711)
T 4hvt_A 354 FISTTKD--RVFLATYDNVV 371 (711)
T ss_dssp EEEECSS--CEEEEEEETTE
T ss_pred EEEEECC--EEEEEEEECCE
Confidence 8999887 67777776665
No 367
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=25.93 E-value=1.2e+02 Score=36.28 Aligned_cols=32 Identities=13% Similarity=0.062 Sum_probs=27.5
Q ss_pred ceeEeEEecCCceeEEeeccCCceEEeeecCcc
Q psy4510 737 SVEDLQWSPGEKRVLASCSVDRSNRIGARRDML 769 (812)
Q Consensus 737 ~V~~l~fs~dg~~~L~s~s~Dg~i~iWd~~~~~ 769 (812)
.|.+++..++.. +|++-+.|+++|||++.++.
T Consensus 239 ~~vs~~~~~~~~-~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 239 TIISMIFLSTYN-VLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp CBSCCEEETTTT-EEEEEBTTCEEEEEETTTTE
T ss_pred eeEEeeccCCcc-EEEEEeCCCEEEEEECCCCC
Confidence 455667778888 89999999999999999886
No 368
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=25.89 E-value=5.2e+02 Score=26.01 Aligned_cols=125 Identities=10% Similarity=0.097 Sum_probs=68.8
Q ss_pred CCCEEEEEEc---CC----CCeEEEEEECCCeEEEEECCCCCcccceeecCCc----------C----CCCeEEEEEcCC
Q psy4510 319 TNSVEDLQWS---PG----EKRVLASCSVDLSIRIWDTRVINTKSCMLTLPNA----------H----TSDVNVISWNRT 377 (812)
Q Consensus 319 ~~~v~~~~~~---p~----~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~----------~----~~~v~~l~~~~~ 377 (812)
.+.+.++.+. |. +....++=+..+.|.++|+.++...+........ . ...+..|+.+|+
T Consensus 151 ~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~ 230 (381)
T 3q6k_A 151 PTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDR 230 (381)
T ss_dssp GGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCC
T ss_pred CCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCC
Confidence 3567888887 22 3333444445788999999865543322111001 0 247889999998
Q ss_pred ----CCEEEEEeCCC-cEEEEe---cCCCCCCCceEEcccC--CCCEEEEEEccCCCcEEEEEECCCCEEEEEcCC
Q psy4510 378 ----EPLIVSGGDDG-CIHVWD---LRRFKKGSSVATFKHH--TAPVTTVEWHPTESSTFASGGADDQIALWDLAV 443 (812)
Q Consensus 378 ----~~~l~sg~~dg-~i~iwd---~~~~~~~~~~~~~~~h--~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~~~ 443 (812)
++.|+-....+ .+.--. +++......+..+-.. ...-..++..+..+.++++--..+.|..|+...
T Consensus 231 ~~~~~~~LYf~plss~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 231 DSEGNRPAYYLAGSAIKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp CTTSCCEEEEEESSCSEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTS
T ss_pred cCCCCeEEEEEECCCCcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCC
Confidence 66666655544 333333 2221112223222211 133445666543346777777788899999876
No 369
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=24.53 E-value=5.1e+02 Score=25.40 Aligned_cols=214 Identities=7% Similarity=-0.113 Sum_probs=110.5
Q ss_pred CceEEEEeCCCCCCeEEEecCCCcEEEE---ccCCCCc---cc--ccccccCCCCCCeeee-eEcC--CCCcEEEeeCCC
Q psy4510 177 TEGFAMDWSSTEPGVLATGDCKRNIHIW---TPREAGA---WQ--VDQKPLGGHTNSAEDL-QWSD--LKTALQTVDDPF 245 (812)
Q Consensus 177 ~~i~~~~~sp~~~~~lat~~~dg~v~iw---d~~~~~~---~~--~~~~~l~~h~~~V~~l-~~s~--~~~~l~s~~~d~ 245 (812)
+.+..+.... ....|+.-+..|.++-. ++..... .. .....+.. ...|.++ .+.+ +..+++.++..|
T Consensus 42 D~~~~~~~~~-t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~G~~i~~~l~l~~-~e~i~~~~~~~~~~~e~~~v~~T~~G 119 (327)
T 3uc1_A 42 DIVAHFFVCS-THDLILFFTTQGRVYRAKAYDLPEASRTARGQHVANLLAFQP-EERIAQVIQIRGYTDAPYLVLATRNG 119 (327)
T ss_dssp GCEEEEEEEE-TTSEEEEEETTSEEEEEEGGGSCBCCSSSCCEEHHHHTTCCT-TCCEEEEEEESSTTSSSEEEEEETTS
T ss_pred CEEEEEEEeC-CCCEEEEEeCCCeEEEEEHHHCcCCCccCCCEEHHHccCCCC-CCEEEEEEEeccCCCCCEEEEEcCCC
Confidence 3344444334 45555555556776544 4433211 00 01112322 3455554 4432 577899999999
Q ss_pred ceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCC--CCC---c--ceeccccccCC
Q psy4510 246 QLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPR--EAG---A--WQVDQKPLVGH 318 (812)
Q Consensus 246 ~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~--~~~---~--~~~~~~~~~~h 318 (812)
.++.-.+..-............++. .+.+..+...... ..|+..+..|.+..+... .-. . .-+....+. .
T Consensus 120 ~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~-d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~-~ 196 (327)
T 3uc1_A 120 LVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAG-DDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFN-I 196 (327)
T ss_dssp EEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTT-CEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCC-T
T ss_pred EEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCC-CEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCC-C
Confidence 9998876542100000111123333 3455555554444 567777788988888766 211 1 111112222 3
Q ss_pred CCCEEEEEEcCCCCeEEEEEECCCeEEEEECCCCCcc----cceeecC-CcCCCCeEEEEEcCCCCEEEEEeCCCcEEEE
Q psy4510 319 TNSVEDLQWSPGEKRVLASCSVDLSIRIWDTRVINTK----SCMLTLP-NAHTSDVNVISWNRTEPLIVSGGDDGCIHVW 393 (812)
Q Consensus 319 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~----~~~~~~~-~~~~~~v~~l~~~~~~~~l~sg~~dg~i~iw 393 (812)
...|.++...+.+. .++..+..|.++.-.+..-... .-+..+. ......+..+........++..+.+|.+.-+
T Consensus 197 ~d~Vv~~~~~~~~~-~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~~ir~ 275 (327)
T 3uc1_A 197 DDRLLSLNVVREGT-YLLVATSGGYAKRTAIEEYPVQGRGGKGVLTVMYDRRRGRLVGALIVDDDSELYAVTSGGGVIRT 275 (327)
T ss_dssp TCCEEEEEECCTTC-EEEEEETTSEEEEEEGGGSCBCCTTSCCEESSCCCTTTCSEEEEEEECTTCEEEEEEGGGCEEEE
T ss_pred CCEEEEEEEECCCC-EEEEEeCCCcEEEEEHHHccccCcCCCcEEEEEecCCCCeEEEEEEeCCCccEEEEcCCCeEEEE
Confidence 45677776666555 4888889999998876422111 1122221 1112334444444444566667778888888
Q ss_pred ecC
Q psy4510 394 DLR 396 (812)
Q Consensus 394 d~~ 396 (812)
+..
T Consensus 276 ~~~ 278 (327)
T 3uc1_A 276 AAR 278 (327)
T ss_dssp EGG
T ss_pred ehh
Confidence 765
No 370
>3a0f_A Xyloglucanase; beta-propeller, hydrolase; 2.50A {Geotrichum SP}
Probab=21.92 E-value=8.6e+02 Score=27.15 Aligned_cols=245 Identities=10% Similarity=0.028 Sum_probs=113.0
Q ss_pred CceEEEEeCCCCC-CeEEEecCC---------CcEEEEccCCCCcccccccccCCC-CCCeeeeeEcCCCCc-EEEeeC-
Q psy4510 177 TEGFAMDWSSTEP-GVLATGDCK---------RNIHIWTPREAGAWQVDQKPLGGH-TNSAEDLQWSDLKTA-LQTVDD- 243 (812)
Q Consensus 177 ~~i~~~~~sp~~~-~~lat~~~d---------g~v~iwd~~~~~~~~~~~~~l~~h-~~~V~~l~~s~~~~~-l~s~~~- 243 (812)
..+..++|++.+. .++++|..| +.|.+ ..+.+..+......+.+. ...+..+++++++.. +.+++.
T Consensus 487 ~~~~~i~~a~~~~~~~~~vG~~d~~~~~~~~~g~i~~-S~DgG~tW~~~~~~~~g~~~~~~~~i~v~~~~~~~~~~~~~~ 565 (763)
T 3a0f_A 487 SSTDGLDFAGRAANVLARVGRNDHPDAGVAGCTQGAY-TTNSGDSWTLFQTCVPSLEVGNGGTIAVGADGKTFVWSPSKA 565 (763)
T ss_dssp SEEEEEEEETTEEEEEEEEEECSSCCTTCCSCTTEEE-ESSTTSSCEECSSCCTTCBTTBCCEEEECTTSSCEEEECSSC
T ss_pred ccccceEeccCCCcEEEEEeCCCcccccccCCCcEEE-ECCCCcCCccCCCCCcccccCCcceEEEecCCCcEEEEeccc
Confidence 3477899988444 566777664 66644 344455443322222111 245777888887654 444442
Q ss_pred -CCceEEeeCCCCCCCCCCCCCceEEcCCCCcEEEEEecCCCCCEEEEEeCCCcEEEEeCCCCCcceeccccccCC-CCC
Q psy4510 244 -PFQLAEHNKKRGKGPGIPTPPLFSFSGHLTEGFAMDWSSTEPGVLATGDCKRNIHIWTPREAGAWQVDQKPLVGH-TNS 321 (812)
Q Consensus 244 -d~~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~l~~sp~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~h-~~~ 321 (812)
++.|. ...+.+. ..+.+. +-...+..+...|..++.++.|. ++.|.+ ....+..|......+... ...
T Consensus 566 ~~~~v~-~S~D~G~----tW~~~~---~l~~~~~~i~~d~~~~~~~y~g~-~g~v~~-S~DgG~tW~~~~~~lp~~~~~~ 635 (763)
T 3a0f_A 566 DGKGPY-TSSDYGK----TWTAPS---GLSKQTTGIAADRVQANTFYVYV-EGDFFV-STDGGKSYTKKGNGLPCCWTYT 635 (763)
T ss_dssp CSSCCE-EESSTTS----CCBCCB---SCCCCCSCEEECSSSTTCEEEEE-TTEEEE-ESSTTSBCEEECBTSCCSSCCC
T ss_pred CCCceE-EeCCCCC----CCeecC---CCCCCcceEEEeccCCCEEEEEc-CCCEEE-EeCCCcCccccccCCCcccCcc
Confidence 43332 1222221 112221 11121356777787667777774 566554 344455554432223210 111
Q ss_pred EEEEEEcCC-CCeEEEEEECCCeEEEEECCC-CCcccceeecCCcCCCCe-EEEEE----cC-CCC-EEEEE--eCCCcE
Q psy4510 322 VEDLQWSPG-EKRVLASCSVDLSIRIWDTRV-INTKSCMLTLPNAHTSDV-NVISW----NR-TEP-LIVSG--GDDGCI 390 (812)
Q Consensus 322 v~~~~~~p~-~~~~l~s~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~v-~~l~~----~~-~~~-~l~sg--~~dg~i 390 (812)
.. +..+|. ...+++ +...+.| |-... +.+-..+..+ ..... ..+.| .+ +.+ +++.| ..++.-
T Consensus 636 ~~-i~~~~~~~~~l~~-~~~~~~l--~~S~D~G~tW~~~~~~---~~~~~~~~~~~g~~~~~~~~~~l~~~G~~~~~~~~ 708 (763)
T 3a0f_A 636 GT-PVTSNLRAGELWV-SVKGVGI--YHSTDFGNTFTALAGS---GSSLNPAVFSIGAPQTPNATETLFLWGIPSASQPE 708 (763)
T ss_dssp EE-EEECSSSTTCEEE-EETTTEE--EEESSTTSBCEECTTB---TTTBEEEEEEEECCSSTTSSCEEEEEEECSTTSCS
T ss_pred cc-EEECCCCCCcEEE-EcCCCeE--EEEcCCCCCceEccCC---CcccccceeEEeeecCCCCCceEEEEEEcccCCCc
Confidence 22 777773 333444 4454543 43322 1222222111 11111 01222 22 223 55555 222223
Q ss_pred EEEecCCCCCCCceEEccc--C-CCCEEEEEEccCCCcEEEEEECCCCEEEEEc
Q psy4510 391 HVWDLRRFKKGSSVATFKH--H-TAPVTTVEWHPTESSTFASGGADDQIALWDL 441 (812)
Q Consensus 391 ~iwd~~~~~~~~~~~~~~~--h-~~~v~~v~~~p~~~~~l~s~~~dg~v~iwd~ 441 (812)
.||-... .+..-..+.. | -..+..|...|.....|+.+...+-|.+=++
T Consensus 709 gl~~S~D--~G~tW~~~~~~~~~~~~~~~i~~~p~~~~~v~~~T~GrGi~~g~~ 760 (763)
T 3a0f_A 709 GLYMSTD--NGGLWTRLNDDAHNYGGATVISGDPRIYGRVYIGMNGRGIICAQA 760 (763)
T ss_dssp EEEEESS--TTSCCEECSCTTCCTBCEEEEEECTTSTTEEEEEEBSSCEEEEES
T ss_pred EEEEeCC--CCCCcEeccCccccCCCcceEEeCCCCCCEEEEeCCCCeEEEEec
Confidence 3443332 2333333331 2 2335588999876566777777666766554
No 371
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.12 E-value=3.1e+02 Score=21.73 Aligned_cols=15 Identities=0% Similarity=-0.040 Sum_probs=7.4
Q ss_pred EEEeecCCCeEEEee
Q psy4510 703 VLATGDCKRNIHIWT 717 (812)
Q Consensus 703 ~lasgs~dg~i~iwd 717 (812)
+.++-..||.+++|+
T Consensus 91 ~~~~L~~dGnlvly~ 105 (113)
T 3mez_B 91 YVLILQINGQAVVYG 105 (113)
T ss_dssp CEEEECTTSCEEEEC
T ss_pred EEEEEcCCceEEEec
Confidence 344444555555554
No 372
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=21.06 E-value=1.6e+02 Score=31.65 Aligned_cols=55 Identities=16% Similarity=0.176 Sum_probs=0.0
Q ss_pred EEecCCCCEEEeecC------------CCeEEEeecCCCCCcccccccccCC-CcceeEeEEecCCceeEEee
Q psy4510 695 YLYTNRFGVLATGDC------------KRNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASC 754 (812)
Q Consensus 695 ~~~s~dg~~lasgs~------------dg~i~iwd~~~~~~~~~~~~~~~gH-~~~V~~l~fs~dg~~~L~s~ 754 (812)
++|.++|.+.++-+. ...|..++..+++ +...+.+. ...++.++||||++ .|+.+
T Consensus 481 L~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGe----l~~fl~~P~~aEpnGiafSPD~k-tLfV~ 548 (592)
T 4a9v_A 481 LGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGE----IRRFMVGPIGCEVTGISFSPDQK-TLFVG 548 (592)
T ss_dssp EEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCC----EEEEEECCTTCEEEEEEECTTSS-EEEEE
T ss_pred eEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCe----EEEEEeCCCCccccCCEECCCCC-EEEEE
No 373
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=20.11 E-value=2.1e+02 Score=30.97 Aligned_cols=59 Identities=14% Similarity=0.218 Sum_probs=36.4
Q ss_pred EEEEEecCCCCCEEEEEeCC------------CcEEEEeCCCCCcceeccccccCC-CCCEEEEEEcCCCCeEEEEE
Q psy4510 275 GFAMDWSSTEPGVLATGDCK------------RNIHIWTPREAGAWQVDQKPLVGH-TNSVEDLQWSPGEKRVLASC 338 (812)
Q Consensus 275 v~~l~~sp~~~~~l~sg~~d------------g~i~vwd~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~~l~s~ 338 (812)
.-.|+|+|.| .+++.-+.+ ..+.+.+..++. ..+.+.++ ...++.++|+|+++.+|+..
T Consensus 478 PDNL~fd~~G-~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~----~~rf~~~P~gaE~TG~~fspDg~tlfvni 549 (592)
T 3zwu_A 478 PDGLGFDKAG-RLWILTDGDSSNAGDFAGMGNNQMLCADPATGE----IRRFMVGPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp EEEEEECTTC-CEEEEECCCCCCSGGGTTTCSCEEEEECTTTCC----EEEEEECCTTCEEEEEEECTTSSEEEEEE
T ss_pred CcceEECCCC-CEEEEecCCCcccccccccccceEEEEeCCCCe----EEEEEeCCCCccCcCeeECCCCCEEEEEE
Confidence 4578999998 555554432 124444555554 22223333 46899999999999766653
Done!